MicrobesOnline Operon Predictions for Helicobacter pylori J99

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column	Description
Gene1	VIMSS id of 1st gene in pair
SysName1	Systematic name of 1st gene in pair
Name1	Ordinary name of 1st gene in pair
Gene2	VIMSS id of 2nd gene in pair
SysName2	Systematic name of 2nd gene in pair
Name2	Ordinary name of 2nd gene in pair
bOp	Whether the pair is predicted to lie in the same operon or not
pOp	Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep	Distance between the two genes, in base pairs
MOGScore	Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore	Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim	Whether the genes share a COG category or not
ExprSim	Correlation of expression patterns (not available for most genomes)

Gene1	Gene2	SysName1	SysName2	Name1	Name2	bOp	pOp	Sep	MOGScore	GOScore	COGSim	ExprSim
26859	26860	jhp0001	jhp0002	nusB	ribE	TRUE	0.933	2.000	0.045	1.000	N	NA
26860	26861	jhp0002	jhp0003	ribE	kdsA	TRUE	0.949	10.000	0.027	1.000	N	NA
26861	26862	jhp0003	jhp0004	kdsA	icfA	TRUE	0.922	-13.000	0.025	1.000	N	NA
26863	26864	jhp0005	jhp0006	pyrF	panC	TRUE	0.906	0.000	0.012	1.000	N	NA
3446250	3446251	jhp_t01	jhp_t02			FALSE	0.173	60.000	0.000	NA		NA
3446251	3446252	jhp_t02	jhp_t03			FALSE	0.213	51.000	0.000	NA		NA
3446252	3446253	jhp_t03	jhp_t04			FALSE	0.271	38.000	0.000	NA		NA
3446253	3446254	jhp_t04	jhp_t05			TRUE	0.657	13.000	0.000	NA		NA
3446254	26865	jhp_t05	jhp0007			FALSE	0.005	820.000	0.000	NA		NA
26865	26866	jhp0007	jhp0008		groEL	FALSE	0.012	315.000	0.000	NA		NA
26866	26867	jhp0008	jhp0009	groEL	groES	TRUE	0.971	25.000	0.356	0.012	Y	NA
26868	26869	jhp0010	jhp0011	dnaG		TRUE	0.941	-3.000	0.035	1.000	N	NA
26869	26870	jhp0011	jhp0012			FALSE	0.278	90.000	0.012	NA		NA
26870	26871	jhp0012	jhp0013			FALSE	0.335	147.000	0.235	NA		NA
26871	26872	jhp0013	jhp0014			TRUE	0.978	0.000	1.000	NA		NA
26872	26873	jhp0014	jhp0015		virB4_1	TRUE	0.975	2.000	1.000	NA		NA
26873	26874	jhp0015	jhp0016	virB4_1		FALSE	0.017	240.000	0.000	NA		NA
26874	26875	jhp0016	jhp0017		cheV_1	FALSE	0.386	107.000	0.071	NA		NA
26875	26876	jhp0017	jhp0018	cheV_1	nspC	TRUE	0.945	-3.000	0.042	1.000	N	NA
26877	26878	jhp0019	jhp0020			TRUE	0.977	11.000	0.429	1.000		NA
26878	26879	jhp0020	jhp0021			FALSE	0.006	617.000	0.000	NA		NA
26879	26880	jhp0021	jhp0022		gltA	FALSE	0.005	705.000	0.000	NA		NA
26881	26882	jhp0023	jhp0024	icd		FALSE	0.438	65.000	0.021	NA		NA
26883	26884	jhp0025	jhp0026	bioD		TRUE	0.894	4.000	0.020	NA		NA
26885	26886	jhp0027	jhp0028			TRUE	0.869	2.000	0.021	NA		NA
26886	26887	jhp0028	jhp0029		clpA	TRUE	0.970	0.000	0.596	NA		NA
26887	26888	jhp0029	jhp0030	clpA	panD	TRUE	0.909	-10.000	0.014	1.000	N	NA
26888	26889	jhp0030	jhp0031	panD		TRUE	0.896	3.000	0.029	NA		NA
26889	26890	jhp0031	jhp0032			TRUE	0.881	-3.000	0.017	NA		NA
26890	26891	jhp0032	jhp0033			TRUE	0.981	8.000	0.533	1.000		NA
26891	26892	jhp0033	jhp0034		comB1	TRUE	0.650	126.000	0.750	NA	Y	NA
26892	26893	jhp0034	jhp0035	comB1	comB2	TRUE	0.985	0.000	1.000	NA	Y	NA
26893	26894	jhp0035	jhp0036	comB2	comB3	TRUE	0.974	-7.000	0.375	NA	Y	NA
26894	26895	jhp0036	jhp0037	comB3	manC	TRUE	0.518	70.000	0.020	1.000	N	NA
26895	26896	jhp0037	jhp0038	manC	gmd	TRUE	0.800	41.000	0.054	1.000	Y	NA
26896	26897	jhp0038	jhp0039	gmd		TRUE	0.993	-7.000	0.381	0.007	Y	NA
26898	26899	jhp0040	jhp0041	hypE		TRUE	0.962	3.000	0.079	1.000	Y	NA
26899	26900	jhp0041	jhp0042			TRUE	0.912	-24.000	0.023	1.000	N	NA
26900	26901	jhp0042	jhp0043			TRUE	0.666	59.000	0.061	1.000	N	NA
26901	26902	jhp0043	jhp0044			TRUE	0.922	-22.000	0.000	0.023		NA
26902	26903	jhp0044	jhp0045			FALSE	0.054	434.000	0.000	0.023		NA
26903	26904	jhp0045	jhp0046			TRUE	0.733	10.000	0.000	NA		NA
26904	26905	jhp0046	jhp0047		putP	FALSE	0.008	428.000	0.000	NA		NA
26905	26906	jhp0047	jhp0048	putP	putA	TRUE	0.863	27.000	0.141	1.000	N	NA
26907	26908	jhp0049	jhp0050			FALSE	0.011	328.000	0.000	NA		NA
26908	26909	jhp0050	jhp0051			FALSE	0.056	130.000	0.000	NA		NA
26909	26910	jhp0051	jhp0052			TRUE	0.634	1.000	0.000	NA		NA
26910	26911	jhp0052	jhp0053			TRUE	0.706	11.000	0.000	NA		NA
26911	26912	jhp0053	jhp0054			FALSE	0.032	181.000	0.000	NA		NA
26912	26913	jhp0054	jhp0055			TRUE	0.634	1.000	0.000	NA		NA
26913	26914	jhp0055	jhp0056			TRUE	0.675	-3.000	0.000	NA		NA
26914	26915	jhp0056	jhp0057			TRUE	0.935	16.000	0.286	NA		NA
26915	26916	jhp0057	jhp0058			TRUE	0.706	11.000	0.000	NA		NA
26916	26917	jhp0058	jhp0059			TRUE	0.616	-30.000	0.000	NA		NA
26917	26918	jhp0059	jhp0060			TRUE	0.966	2.000	0.636	NA		NA
26918	26919	jhp0060	jhp0061			TRUE	0.970	-7.000	0.571	NA		NA
26920	26921	jhp0062	jhp0063	ureH	ureG	TRUE	0.992	0.000	0.337	0.008	Y	NA
26921	26922	jhp0063	jhp0064	ureG	ureF	TRUE	0.971	29.000	0.439	0.008	Y	NA
26922	26923	jhp0064	jhp0065	ureF	ureE	TRUE	0.978	24.000	0.460	0.008	Y	NA
26923	26924	jhp0065	jhp0066	ureE	ureI	TRUE	0.942	2.000	0.096	1.000		NA
26924	26925	jhp0066	jhp0067	ureI	ureB	FALSE	0.092	224.000	0.019	1.000		NA
26925	26926	jhp0067	jhp0068	ureB	ureA	TRUE	0.989	4.000	0.045	0.003	Y	NA
26926	3446255	jhp0068	jhp_t06	ureA		FALSE	0.015	268.000	0.000	NA		NA
3446255	26927	jhp_t06	jhp0069		lspA	TRUE	0.706	11.000	0.000	NA		NA
26927	26928	jhp0069	jhp0070	lspA	glmM	TRUE	0.943	-6.000	0.042	1.000	N	NA
26929	26930	jhp0071	jhp0072	rpsT	prfA	FALSE	0.419	119.000	0.029	1.000	Y	NA
26930	26931	jhp0072	jhp0073	prfA		FALSE	0.008	414.000	0.000	NA		NA
26931	26932	jhp0073	jhp0074			FALSE	0.016	251.000	0.000	NA		NA
26933	26934	jhp0075	jhp0076		rpsI	FALSE	0.153	150.000	0.008	1.000	N	NA
26934	26935	jhp0076	jhp0077	rpsI	rplM	TRUE	0.989	-3.000	0.231	0.040	Y	NA
26935	26936	jhp0077	jhp0078	rplM		FALSE	0.010	352.000	0.000	NA		NA
26936	26937	jhp0078	jhp0079			TRUE	0.964	7.000	0.216	NA		NA
26937	26938	jhp0079	jhp0080			TRUE	0.648	54.000	0.096	NA		NA
26938	26939	jhp0080	jhp0081		rpoD	TRUE	0.750	20.000	0.017	NA		NA
26939	26940	jhp0081	jhp0082	rpoD		FALSE	0.086	223.000	0.011	1.000	N	NA
26940	26941	jhp0082	jhp0083		fabD	TRUE	0.929	14.000	0.037	1.000	N	NA
3446256	1937530	jhp_t07	jhp0084			FALSE	0.024	206.000	0.000	NA		NA
1937530	26942	jhp0084	jhp0085			TRUE	0.675	-3.000	0.000	NA		NA
26943	26944	jhp0086	jhp0087			TRUE	0.587	96.000	0.364	NA		NA
26946	26947	jhp0089	jhp0090		thrC	FALSE	0.227	104.000	0.012	NA		NA
26948	26949	jhp0091	jhp0092			TRUE	0.890	0.000	0.024	NA		NA
26949	26950	jhp0092	jhp0093			FALSE	0.057	217.000	0.010	NA		NA
26951	26952	jhp0094	jhp0095			TRUE	0.898	32.000	0.700	NA	N	NA
26952	26953	jhp0095	jhp0096		cpdB	FALSE	0.045	216.000	0.000	1.000	N	NA
26953	26954	jhp0096	jhp0097	cpdB		FALSE	0.221	141.000	0.016	1.000	N	NA
26954	26955	jhp0097	jhp0098		metB	TRUE	0.761	38.000	0.048	1.000	N	NA
26955	26956	jhp0098	jhp0099	metB	cysK	TRUE	0.978	25.000	0.690	0.015	Y	NA
26958	26959	jhp0101	jhp0102	dnaK	grpE	TRUE	0.923	30.000	0.029	0.012	Y	NA
26959	26960	jhp0102	jhp0103	grpE		TRUE	0.938	0.000	0.038	1.000	N	NA
26961	26962	jhp0104	jhp0105			TRUE	0.677	38.000	0.047	NA		NA
26963	26964	jhp0106	jhp0107		flaB	TRUE	0.841	48.000	0.700	NA		NA
26965	26966	jhp0108	jhp0109	topA_1		TRUE	0.898	-7.000	0.010	1.000	N	NA
26967	26968	jhp0110	jhp0111		ppsA	FALSE	0.187	99.000	0.007	NA		NA
26969	26970	jhp0112	jhp0113		thrS	TRUE	0.711	40.000	0.076	NA		NA
26970	26971	jhp0113	jhp0114	thrS	infC	TRUE	0.962	-3.000	0.060	1.000	Y	NA
26971	26972	jhp0114	jhp0115	infC	rpmI	TRUE	0.981	-19.000	0.652	1.000	Y	NA
26972	26973	jhp0115	jhp0116	rpmI	rplT	TRUE	0.910	95.000	0.928	0.040	Y	NA
26973	26974	jhp0116	jhp0117	rplT		FALSE	0.051	200.000	0.007	NA		NA
26974	26975	jhp0117	jhp0118			FALSE	0.007	480.000	0.000	NA		NA
26975	26976	jhp0118	jhp0119			FALSE	0.008	412.000	0.000	NA		NA
26977	26978	jhp0120	jhp0121	sdaB	sdaC	TRUE	0.978	0.000	0.350	1.000	Y	NA
26979	26980	jhp0122	jhp0123	aroF		FALSE	0.039	289.000	0.012	NA		NA
26981	26982	jhp0124	jhp0125	bcp		TRUE	0.911	10.000	0.009	1.000		NA
26982	26983	jhp0125	jhp0126			TRUE	0.988	-7.000	0.209	0.003		NA
26983	26984	jhp0126	jhp0127			TRUE	0.935	29.000	0.657	1.000	Y	NA
26985	26986	jhp0128	jhp0129	lldP_1	lldP_2	TRUE	0.968	49.000	0.625	0.002	Y	NA
26987	26988	jhp0130	jhp0131	mutY		TRUE	0.873	1.000	0.008	1.000	N	NA
26989	26990	jhp0132	jhp0133	fixN	fixO	TRUE	0.990	13.000	0.283	0.004	N	NA
26990	26991	jhp0133	jhp0134	fixO	fixQ	TRUE	0.995	11.000	0.738	0.004	N	NA
26991	26992	jhp0134	jhp0135	fixQ	fixP	TRUE	0.989	2.000	0.262	0.004	N	NA
26992	26993	jhp0135	jhp0136	fixP		TRUE	0.706	11.000	0.000	NA		NA
26993	26994	jhp0136	jhp0137			FALSE	0.091	101.000	0.000	NA		NA
26994	26995	jhp0137	jhp0138			TRUE	0.964	13.000	0.438	NA		NA
26995	26996	jhp0138	jhp0139			FALSE	0.073	612.000	0.429	NA		NA
26998	26999	jhp0141	jhp0142	recA	eno	TRUE	0.942	12.000	0.033	1.000	N	NA
26999	27000	jhp0142	jhp0143	eno		TRUE	0.932	-7.000	0.080	NA		NA
27000	27001	jhp0143	jhp0144			TRUE	0.954	17.000	0.788	NA		NA
27001	27002	jhp0144	jhp0145		aroK	TRUE	0.954	5.000	0.127	NA		NA
27002	27003	jhp0145	jhp0146	aroK		TRUE	0.868	22.000	0.078	1.000		NA
27006	27007	jhp0149	jhp0150		hemB	TRUE	0.829	1.000	0.010	NA		NA
27007	27008	jhp0150	jhp0151	hemB		TRUE	0.834	22.000	0.028	1.000	N	NA
27008	27009	jhp0151	jhp0152			TRUE	0.930	26.000	0.448	1.000	Y	NA
27009	27010	jhp0152	jhp0153			FALSE	0.009	408.000	0.000	NA		NA
27010	27011	jhp0153	jhp0154			TRUE	0.947	-21.000	0.233	NA		NA
27011	27012	jhp0154	jhp0155			TRUE	0.600	47.000	0.018	1.000		NA
27012	27013	jhp0155	jhp0156			TRUE	0.926	3.000	0.068	NA		NA
27013	27014	jhp0156	jhp0157		prfB	FALSE	0.334	70.000	0.011	NA		NA
27014	27015	jhp0157	jhp0158	prfB	moeA	FALSE	0.441	61.000	0.007	1.000	N	NA
27015	27016	jhp0158	jhp0159	moeA	fliR	TRUE	0.965	10.000	0.069	1.000	N	NA
27016	27017	jhp0159	jhp0160	fliR		TRUE	0.975	-6.000	0.069	0.070		NA
27018	27019	jhp0161	jhp0162		fba	TRUE	0.953	14.000	0.121	1.000	N	NA
27019	27020	jhp0162	jhp0163	fba	efp	TRUE	0.783	22.000	0.012	1.000	N	NA
27020	27021	jhp0163	jhp0164	efp		FALSE	0.013	547.000	0.000	1.000	N	NA
27021	27022	jhp0164	jhp0165			TRUE	0.969	-7.000	0.552	NA		NA
27023	27024	jhp0166	jhp0167	neuB		TRUE	0.917	3.000	0.018	1.000	N	NA
27024	27025	jhp0167	jhp0168		lnt	TRUE	0.927	-3.000	0.020	1.000	N	NA
27026	27027	jhp0169	jhp0170		lysS	TRUE	0.938	10.000	0.023	1.000		NA
27027	27028	jhp0170	jhp0171	lysS	glyA	TRUE	0.941	0.000	0.044	1.000	N	NA
27028	27029	jhp0171	jhp0172	glyA		TRUE	0.975	10.000	0.271	1.000		NA
27029	27030	jhp0172	jhp0173			TRUE	0.889	22.000	0.258	NA		NA
27033	27034	jhp0176	jhp0177		frdB	TRUE	0.762	22.000	0.009	1.000	N	NA
27034	27035	jhp0177	jhp0178	frdB	frdA	TRUE	0.984	-7.000	0.025	0.003	Y	NA
27035	27036	jhp0178	jhp0179	frdA	frdC	TRUE	0.995	10.000	0.276	0.003	Y	NA
27037	27038	jhp0180	jhp0181	tpi	fabI	TRUE	0.985	10.000	0.071	0.041	N	NA
27038	27039	jhp0181	jhp0182	fabI	lpxD	TRUE	0.942	10.000	0.018	1.000	N	NA
27039	27040	jhp0182	jhp0183	lpxD	metK	FALSE	0.482	66.000	0.011	1.000	N	NA
27040	27041	jhp0183	jhp0184	metK	ndk	FALSE	0.462	67.000	0.010	1.000	N	NA
27041	27042	jhp0184	jhp0185	ndk		TRUE	0.726	25.000	0.033	NA		NA
27042	27043	jhp0185	jhp0186		rpmF	TRUE	0.853	16.000	0.032	NA		NA
27043	27044	jhp0186	jhp0187	rpmF	plsX	TRUE	0.727	78.000	0.418	1.000		NA
27044	27045	jhp0187	jhp0188	plsX	fabH	TRUE	0.954	24.000	0.058	0.009	Y	NA
27045	27046	jhp0188	jhp0189	fabH		TRUE	0.842	24.000	0.154	NA		NA
27047	27048	jhp0190	jhp0191			FALSE	0.277	78.000	0.009	NA		NA
27048	27049	jhp0191	jhp0192			FALSE	0.279	37.000	0.000	NA		NA
27052	27053	jhp0195	jhp0196		htpG	FALSE	0.269	104.000	0.010	1.000		NA
27054	27055	jhp0197	jhp0198		dapE	FALSE	0.031	448.000	0.013	1.000		NA
27055	27056	jhp0198	jhp0199	dapE	gidA	TRUE	0.925	10.000	0.010	1.000	N	NA
27057	27058	jhp0200	jhp0201		cdsA	TRUE	0.969	13.000	0.031	0.093	N	NA
27058	27059	jhp0201	jhp0202	cdsA		TRUE	0.890	1.000	0.002	1.000	Y	NA
27059	27060	jhp0202	jhp0203			FALSE	0.338	51.000	0.004	NA		NA
27062	27063	jhp0205	jhp0206			FALSE	0.203	168.000	0.034	1.000		NA
27063	27064	jhp0206	jhp0207			TRUE	0.867	22.000	0.056	1.000	N	NA
27064	27065	jhp0207	jhp0208			FALSE	0.155	164.000	0.015	1.000		NA
27065	27066	jhp0208	jhp0209		radA	FALSE	0.312	79.000	0.007	1.000		NA
27066	27067	jhp0209	jhp0210	radA		FALSE	0.275	124.000	0.008	1.000	Y	NA
27068	27069	jhp0211	jhp0212			FALSE	0.021	218.000	0.000	NA		NA
3446257	27071	jhp_t08	jhp0214		hopA	FALSE	0.054	133.000	0.000	NA		NA
27071	27072	jhp0214	jhp0215	hopA	kdsB	FALSE	0.084	194.000	0.016	NA		NA
27073	27074	jhp0216	jhp0217			TRUE	0.931	16.000	0.258	NA		NA
27074	27075	jhp0217	jhp0218			TRUE	0.933	22.000	0.763	NA		NA
27075	27076	jhp0218	jhp0219			TRUE	0.951	0.000	0.211	NA		NA
27077	27078	jhp0220	jhp0221			FALSE	0.507	111.000	0.167	1.000		NA
27078	27079	jhp0221	jhp0222		hemC	TRUE	0.868	0.000	0.008	1.000		NA
27079	27080	jhp0222	jhp0223	hemC	proS	TRUE	0.917	11.000	0.010	1.000	N	NA
27080	27081	jhp0223	jhp0224	proS	hemA	TRUE	0.976	4.000	0.040	0.057	N	NA
27081	27082	jhp0224	jhp0225	hemA	ispB	TRUE	0.957	0.000	0.051	1.000	Y	NA
27082	27083	jhp0225	jhp0226	ispB		TRUE	0.909	10.000	0.017	NA		NA
27083	27084	jhp0226	jhp0227			TRUE	0.958	-7.000	0.286	NA		NA
27084	27085	jhp0227	jhp0228		napA	TRUE	0.870	21.000	0.121	NA		NA
27085	27086	jhp0228	jhp0229	napA		FALSE	0.048	208.000	0.000	1.000	N	NA
27086	27087	jhp0229	jhp0230			TRUE	0.966	-3.000	0.406	NA		NA
27087	27088	jhp0230	jhp0231		flgI	TRUE	0.971	-3.000	0.569	NA		NA
27089	27090	jhp0232	jhp0233	deaD		TRUE	0.906	21.000	0.119	1.000	N	NA
27090	27091	jhp0233	jhp0234			TRUE	0.956	7.000	0.119	NA		NA
27092	27093	jhp0235	jhp0236			TRUE	0.974	10.000	0.250	1.000		NA
27093	3446258	jhp0236	jhp_t09			FALSE	0.080	112.000	0.000	NA		NA
27094	27095	jhp0237	jhp0238			TRUE	0.966	13.000	0.500	NA		NA
27095	27096	jhp0238	jhp0239		purA	FALSE	0.210	99.000	0.009	NA		NA
27096	27097	jhp0239	jhp0240	purA		TRUE	0.841	-3.000	0.009	NA		NA
27097	27098	jhp0240	jhp0241			TRUE	0.936	-7.000	0.093	NA		NA
27098	27099	jhp0241	jhp0242			TRUE	0.888	-3.000	0.010	1.000		NA
27099	27100	jhp0242	jhp0243		xseA	TRUE	0.901	13.000	0.011	1.000	N	NA
27101	27102	jhp0244	jhp0245			TRUE	0.978	-7.000	0.727	1.000		NA
27103	27104	jhp0246	jhp0247			TRUE	0.953	-28.000	0.333	NA		NA
27104	27105	jhp0247	jhp0248			TRUE	0.950	-3.000	0.156	NA		NA
27105	27106	jhp0248	jhp0249		clpB	TRUE	0.705	73.000	0.216	1.000	N	NA
27106	27107	jhp0249	jhp0250	clpB	ccdA	TRUE	0.809	57.000	0.216	1.000	Y	NA
27107	27108	jhp0250	jhp0251	ccdA	pyrC_1	TRUE	0.936	10.000	0.014	1.000	N	NA
27108	27109	jhp0251	jhp0252	pyrC_1	orf1	TRUE	0.917	-15.000	0.011	1.000	Y	NA
27109	27110	jhp0252	jhp0253	orf1		FALSE	0.101	247.000	0.066	NA		NA
27110	27111	jhp0253	jhp0254			TRUE	0.931	10.000	0.033	NA		NA
27111	27112	jhp0254	jhp0255			TRUE	0.658	34.000	0.029	NA		NA
27112	27113	jhp0255	jhp0256			TRUE	0.966	-7.000	0.462	NA		NA
27113	27114	jhp0256	jhp0257			TRUE	0.977	-10.000	1.000	NA		NA
27114	27115	jhp0257	jhp0258			TRUE	0.960	-3.000	0.276	NA		NA
27115	27116	jhp0258	jhp0259			TRUE	0.884	17.000	0.087	NA		NA
27116	27117	jhp0259	jhp0260			TRUE	0.608	37.000	0.022	NA		NA
27117	27118	jhp0260	jhp0261			TRUE	0.756	-12.000	0.000	1.000		NA
27118	27119	jhp0261	jhp0262			TRUE	0.714	57.000	0.139	1.000		NA
27119	27120	jhp0262	jhp0263		gppA	TRUE	0.986	10.000	0.806	1.000		NA
27120	27121	jhp0263	jhp0264	gppA	waaC	TRUE	0.976	-3.000	0.429	1.000	N	NA
27121	27122	jhp0264	jhp0265	waaC	waaM	TRUE	0.976	-3.000	0.231	1.000	Y	NA
27124	27125	jhp0267	jhp0268		aroB	TRUE	0.939	5.000	0.031	1.000		NA
27125	27126	jhp0268	jhp0269	aroB		TRUE	0.939	-9.000	0.041	1.000	N	NA
27126	27127	jhp0269	jhp0270			TRUE	0.952	-3.000	0.063	1.000	N	NA
27127	27128	jhp0270	jhp0271		ftsH_1	TRUE	0.946	-13.000	0.067	1.000	N	NA
27128	27129	jhp0271	jhp0272	ftsH_1		TRUE	0.953	3.000	0.237	NA		NA
27129	27130	jhp0272	jhp0273			TRUE	0.937	13.000	0.100	NA		NA
27130	27131	jhp0273	jhp0274			TRUE	0.631	68.000	0.172	NA		NA
27131	27132	jhp0274	jhp0275		lysA	FALSE	0.495	48.000	0.008	1.000		NA
27132	27133	jhp0275	jhp0276	lysA		TRUE	0.936	5.000	0.009	1.000	Y	NA
27133	27134	jhp0276	jhp0277			TRUE	0.918	13.000	0.053	NA		NA
27134	27135	jhp0277	jhp0278		pabB	TRUE	0.873	1.000	0.021	NA		NA
27135	27136	jhp0278	jhp0279	pabB	amiE	FALSE	0.263	128.000	0.024	1.000		NA
27138	27139	jhp0281	jhp0282	rplU	rpmA	TRUE	0.992	14.000	0.667	0.038	Y	NA
27139	27140	jhp0282	jhp0283	rpmA	dppA	FALSE	0.205	119.000	0.004	1.000	N	NA
27140	27141	jhp0283	jhp0284	dppA	dppB	TRUE	0.981	11.000	0.021	0.034	Y	NA
27141	1937531	jhp0284	jhp0285	dppB	dppC	TRUE	0.659	0.000	0.000	NA		NA
1937531	27142	jhp0285	jhp0286	dppC	dppD	TRUE	0.682	12.000	0.000	NA		NA
27142	27143	jhp0286	jhp0287	dppD	dppF	TRUE	0.985	-3.000	0.087	0.004		NA
27143	27144	jhp0287	jhp0288	dppF		TRUE	0.735	20.000	0.008	1.000		NA
27144	27145	jhp0288	jhp0289			FALSE	0.074	196.000	0.007	1.000		NA
27145	27146	jhp0289	jhp0290			FALSE	0.015	266.000	0.000	NA		NA
27146	27147	jhp0290	jhp0291		hemL	TRUE	0.961	10.000	0.154	NA		NA
27147	27148	jhp0291	jhp0292	hemL		TRUE	0.964	-10.000	0.462	NA		NA
27148	27149	jhp0292	jhp0293			TRUE	0.937	16.000	0.308	NA		NA
27149	27150	jhp0293	jhp0294			TRUE	0.736	84.000	0.800	NA		NA
27150	27151	jhp0294	jhp0295			TRUE	0.989	13.000	0.276	0.005		NA
27151	27152	jhp0295	jhp0296			TRUE	0.828	46.000	0.517	NA		NA
27152	27153	jhp0296	jhp0297			TRUE	0.974	0.000	0.788	NA		NA
27154	27155	jhp0298	jhp0299			FALSE	0.040	201.000	0.000	1.000		NA
27155	27156	jhp0299	jhp0300			TRUE	0.968	0.000	0.333	1.000		NA
27156	27157	jhp0300	jhp0301			FALSE	0.012	573.000	0.000	1.000	N	NA
27157	27158	jhp0301	jhp0302		argS	FALSE	0.046	277.000	0.004	1.000	N	NA
27158	27159	jhp0302	jhp0303	argS		TRUE	0.919	3.000	0.020	1.000	N	NA
27159	27160	jhp0303	jhp0304		gmk	FALSE	0.443	72.000	0.011	1.000	N	NA
27160	27161	jhp0304	jhp0305	gmk		TRUE	0.796	-7.000	0.005	NA		NA
27164	1937532	jhp0308	jhp0309	flgH	neuA	FALSE	0.371	24.000	0.000	NA		NA
1937532	27165	jhp0309	jhp0310	neuA	flaG	TRUE	0.675	-3.000	0.000	NA		NA
27166	27167	jhp0311	jhp0312	lpxK	nadE	TRUE	0.931	-3.000	0.024	1.000	N	NA
3446259	27168	jhp_t10	jhp0313		ilvC	FALSE	0.116	88.000	0.000	NA		NA
27168	27169	jhp0313	jhp0314	ilvC	minD	TRUE	0.728	25.000	0.012	1.000	N	NA
27169	27170	jhp0314	jhp0315	minD	minE	TRUE	0.981	-3.000	0.618	NA	Y	NA
27170	27171	jhp0315	jhp0316	minE		TRUE	0.876	12.000	0.010	NA	N	NA
27171	27172	jhp0316	jhp0317			TRUE	0.949	-3.000	0.026	1.000	Y	NA
27172	27173	jhp0317	jhp0318			FALSE	0.044	259.000	0.005	1.000		NA
27173	27174	jhp0318	jhp0319			FALSE	0.315	185.000	0.500	NA		NA
27174	27175	jhp0319	jhp0320			TRUE	0.975	-16.000	1.000	NA		NA
27176	27177	jhp0321	jhp0322		recJ	TRUE	0.897	0.000	0.010	1.000	N	NA
27177	27178	jhp0322	jhp0323	recJ	pyrG	TRUE	0.948	10.000	0.026	1.000	N	NA
27179	27180	jhp0324	jhp0325		fliF	TRUE	0.672	44.000	0.032	1.000		NA
27180	27181	jhp0325	jhp0326	fliF	fliG	TRUE	0.987	17.000	0.477	0.015	Y	NA
27181	27182	jhp0326	jhp0327	fliG	fliH	TRUE	0.991	-13.000	0.308	0.008	Y	NA
27182	27183	jhp0327	jhp0328	fliH	dxs	TRUE	0.948	-3.000	0.052	1.000	N	NA
27183	27184	jhp0328	jhp0329	dxs	lepA	TRUE	0.889	-3.000	0.008	1.000	N	NA
27184	27185	jhp0329	jhp0330	lepA		TRUE	0.749	15.000	0.007	NA		NA
27185	27186	jhp0330	jhp0331			TRUE	0.943	-57.000	0.250	NA		NA
27186	27187	jhp0331	jhp0332			FALSE	0.302	32.000	0.000	NA		NA
27188	27189	jhp0333	jhp0334	flgG_1	kgtP	TRUE	0.689	56.000	0.066	1.000	N	NA
27189	27190	jhp0334	jhp0335	kgtP	ftsK	FALSE	0.054	386.000	0.000	0.067	N	NA
27190	27191	jhp0335	jhp0336	ftsK		TRUE	0.981	-3.000	0.096	0.072	N	NA
27191	27192	jhp0336	jhp0337		tktA	TRUE	0.965	-3.000	0.169	1.000	N	NA
27192	27193	jhp0337	jhp0338	tktA	ribF	TRUE	0.611	47.000	0.013	1.000	N	NA
27193	27194	jhp0338	jhp0339	ribF	hlyA	TRUE	0.900	-34.000	0.018	1.000	N	NA
27194	27195	jhp0339	jhp0340	hlyA		TRUE	0.870	0.000	0.016	NA		NA
27196	27197	jhp0341	jhp0342	pyrB		FALSE	0.026	257.000	0.000	1.000		NA
27197	27198	jhp0342	jhp0343		msbA	FALSE	0.394	91.000	0.020	1.000		NA
27198	27199	jhp0343	jhp0344	msbA		TRUE	0.885	-6.000	0.020	NA		NA
27199	27200	jhp0344	jhp0345			TRUE	0.939	4.000	0.072	NA		NA
27200	27201	jhp0345	jhp0346			FALSE	0.305	133.000	0.054	1.000		NA
27201	27202	jhp0346	jhp0347			FALSE	0.381	186.000	0.833	NA		NA
27202	27203	jhp0347	jhp0348		nixA	TRUE	0.616	58.000	0.090	NA		NA
27206	27207	jhp0351	jhp0352		copP	FALSE	0.217	199.000	0.250	NA		NA
27207	27208	jhp0352	jhp0353	copP	copA	TRUE	0.996	1.000	0.875	0.002	Y	NA
27208	27209	jhp0353	jhp0354	copA	pssA	TRUE	0.913	-3.000	0.013	1.000	N	NA
27209	27210	jhp0354	jhp0355	pssA		TRUE	0.829	-10.000	0.009	NA		NA
27210	27211	jhp0355	jhp0356		ftsH_2	TRUE	0.937	3.000	0.109	NA		NA
27211	27212	jhp0356	jhp0357	ftsH_2	prmA	TRUE	0.952	9.000	0.032	1.000	N	NA
27212	27213	jhp0357	jhp0358	prmA	cheY	TRUE	0.925	1.000	0.029	1.000	N	NA
3446260	27215	jhp_t11	jhp0360			FALSE	0.248	43.000	0.000	NA		NA
27215	27216	jhp0360	jhp0361			TRUE	0.923	3.000	0.062	NA		NA
27216	27217	jhp0361	jhp0362		gidB	TRUE	0.733	-57.000	0.002	NA		NA
27217	27218	jhp0362	jhp0363	gidB	queA	TRUE	0.918	-3.000	0.015	1.000	N	NA
27218	27219	jhp0363	jhp0364	queA		TRUE	0.912	1.000	0.036	NA	N	NA
27219	27220	jhp0364	jhp0365			TRUE	0.978	-7.000	0.535	NA	Y	NA
27220	27221	jhp0365	jhp0366		ruvB	FALSE	0.432	67.000	0.008	1.000	N	NA
27221	27222	jhp0366	jhp0367	ruvB	panB	TRUE	0.922	1.000	0.027	1.000	N	NA
27223	27224	jhp0368	jhp0369			TRUE	0.970	-22.000	0.778	NA		NA
27224	27225	jhp0369	jhp0370			TRUE	0.980	12.000	1.000	NA		NA
27225	27226	jhp0370	jhp0371			TRUE	0.969	10.000	0.273	NA		NA
27226	27227	jhp0371	jhp0372			TRUE	0.911	3.000	0.030	NA	N	NA
27227	27228	jhp0372	jhp0373		lpxC	TRUE	0.934	-3.000	0.027	1.000	N	NA
27228	27229	jhp0373	jhp0374	lpxC		TRUE	0.812	22.000	0.035	NA	N	NA
27229	27230	jhp0374	jhp0375		thrB	TRUE	0.578	54.000	0.032	NA	N	NA
27230	27231	jhp0375	jhp0376	thrB		TRUE	0.912	-28.000	0.044	NA	N	NA
27231	27232	jhp0376	jhp0377		infB	TRUE	0.957	-3.000	0.171	NA	N	NA
27232	27233	jhp0377	jhp0378	infB	rbfA	TRUE	0.982	0.000	0.530	1.000	Y	NA
27233	27234	jhp0378	jhp0379	rbfA		TRUE	0.905	-7.000	0.033	NA		NA
27234	27235	jhp0379	jhp0380			FALSE	0.070	161.000	0.002	NA		NA
27235	27236	jhp0380	jhp0381			FALSE	0.017	353.000	0.000	1.000		NA
27237	27238	jhp0382	jhp0383		flhA	TRUE	0.809	34.000	0.106	1.000		NA
27239	27240	jhp0384	jhp0385	rpsO		FALSE	0.374	56.000	0.007	NA	N	NA
27240	27241	jhp0385	jhp0386		aroD	FALSE	0.247	113.000	0.014	NA	N	NA
27241	27242	jhp0386	jhp0387	aroD	pepQ	TRUE	0.971	13.000	0.168	1.000	Y	NA
27242	27243	jhp0387	jhp0388	pepQ	folK	TRUE	0.940	-3.000	0.033	1.000	N	NA
27243	27244	jhp0388	jhp0389	folK	flhF	TRUE	0.941	-3.000	0.035	1.000	N	NA
27244	27245	jhp0389	jhp0390	flhF		TRUE	0.975	-3.000	0.382	1.000	N	NA
27247	27248	jhp0392	jhp0393	fliA	fliM	TRUE	0.959	-7.000	0.118	1.000	N	NA
27248	27249	jhp0393	jhp0394	fliM		TRUE	0.992	4.000	0.142	0.003	Y	NA
27249	27250	jhp0394	jhp0395			TRUE	0.826	30.000	0.170	NA	N	NA
27250	27251	jhp0395	jhp0396			TRUE	0.966	-3.000	0.421	NA		NA
27252	27253	jhp0397	jhp0398	fur		FALSE	0.156	160.000	0.009	1.000	N	NA
27253	27254	jhp0398	jhp0399			TRUE	0.974	-3.000	0.013	0.006	N	NA
27254	27255	jhp0399	jhp0400		dnaJ_1	TRUE	0.976	10.000	0.211	1.000	N	NA
27257	27258	jhp0402	jhp0403			FALSE	0.117	221.000	0.000	0.070	N	NA
27258	27259	jhp0403	jhp0404			TRUE	0.608	22.000	0.000	1.000	N	NA
27259	27260	jhp0404	jhp0405		htrA	TRUE	0.777	22.000	0.011	1.000	N	NA
27260	27261	jhp0405	jhp0406	htrA		TRUE	0.820	45.000	0.206	1.000	N	NA
27261	27262	jhp0406	jhp0407		pgsA	FALSE	0.189	196.000	0.003	0.066	N	NA
27262	27263	jhp0407	jhp0408	pgsA		TRUE	0.797	-66.000	0.009	NA		NA
27263	27264	jhp0408	jhp0409			TRUE	0.960	10.000	0.132	NA		NA
27264	27265	jhp0409	jhp0410		dapA	TRUE	0.970	-3.000	0.238	1.000	N	NA
27265	27266	jhp0410	jhp0411	dapA		TRUE	0.956	14.000	0.217	1.000		NA
27266	27267	jhp0411	jhp0412		pyrD	TRUE	0.939	-3.000	0.048	1.000		NA
27267	27268	jhp0412	jhp0413	pyrD	ppk	TRUE	0.645	39.000	0.013	1.000	N	NA
27268	3446261	jhp0413	jhp_t12	ppk		FALSE	0.103	94.000	0.000	NA		NA
3446261	27269	jhp_t12	jhp0414		hsdS_1a	FALSE	0.007	477.000	0.000	NA		NA
27269	27270	jhp0414	jhp0415	hsdS_1a	hsdM_1	TRUE	0.986	-7.000	0.150	0.070	Y	NA
27270	1937533	jhp0415	jhp0416	hsdM_1	hsdR_1	TRUE	0.661	-7.000	0.000	NA		NA
1937533	27271	jhp0416	jhp0417	hsdR_1		FALSE	0.005	674.000	0.000	NA		NA
27271	27272	jhp0417	jhp0418			TRUE	0.697	25.000	0.025	NA		NA
27272	27273	jhp0418	jhp0419			TRUE	0.936	10.000	0.040	NA		NA
27273	27274	jhp0419	jhp0420			TRUE	0.960	-31.000	0.500	NA		NA
27274	27275	jhp0420	jhp0421			TRUE	0.963	12.000	0.294	NA		NA
27275	27276	jhp0421	jhp0422		pepF	TRUE	0.933	-15.000	0.115	NA		NA
27276	27277	jhp0422	jhp0423	pepF	kefB	FALSE	0.423	98.000	0.028	1.000	N	NA
27277	27278	jhp0423	jhp0424	kefB		FALSE	0.012	319.000	0.000	NA		NA
27279	27280	jhp0425	jhp0426	modA	modB	TRUE	0.987	22.000	0.660	0.002	Y	NA
27280	27281	jhp0426	jhp0427	modB	modC	TRUE	0.978	-3.000	0.286	1.000	Y	NA
27283	27284	jhp0429	jhp0430			TRUE	0.983	9.000	0.875	NA		NA
27284	27285	jhp0430	jhp0431			TRUE	0.962	-34.000	0.273	1.000	N	NA
27285	27286	jhp0431	jhp0432			TRUE	0.549	46.000	0.008	1.000	N	NA
27286	27287	jhp0432	jhp0433			TRUE	0.826	16.000	0.008	1.000	N	NA
27287	27288	jhp0433	jhp0434			TRUE	0.942	3.000	0.136	NA		NA
27288	27289	jhp0434	jhp0435			FALSE	0.031	182.000	0.000	NA		NA
27289	27290	jhp0435	jhp0436			FALSE	0.027	191.000	0.000	NA		NA
27292	27293	jhp0438	jhp0439			TRUE	0.922	72.000	0.875	0.015		NA
27293	27294	jhp0439	jhp0440			FALSE	0.006	515.000	0.000	NA		NA
27294	27295	jhp0440	jhp0441			FALSE	0.152	69.000	0.000	NA		NA
27296	27297	jhp0442	jhp0443		rpmB	FALSE	0.160	187.000	0.025	1.000	N	NA
27297	27298	jhp0443	jhp0444	rpmB		FALSE	0.256	100.000	0.008	1.000		NA
27299	27300	jhp0445	jhp0446	mraY	murD	TRUE	0.993	2.000	0.647	0.008	Y	NA
27301	27302	jhp0447	jhp0448			TRUE	0.911	-10.000	0.043	NA		NA
27303	27304	jhp0449	jhp0450			TRUE	0.995	11.000	0.800	0.002		NA
27304	27305	jhp0450	jhp0451		pldA	TRUE	0.946	15.000	0.184	1.000		NA
27305	27306	jhp0451	jhp0452	pldA	dnaN	FALSE	0.449	58.000	0.007	1.000	N	NA
27306	27307	jhp0452	jhp0453	dnaN	gyrB	TRUE	0.967	13.000	0.114	1.000	Y	NA
27307	27308	jhp0453	jhp0454	gyrB		TRUE	0.896	7.000	0.008	1.000		NA
27308	27309	jhp0454	jhp0455			TRUE	0.966	-13.000	0.545	NA		NA
27309	27310	jhp0455	jhp0456			FALSE	0.022	215.000	0.000	NA		NA
27310	27311	jhp0456	jhp0457			TRUE	0.969	0.000	0.269	1.000	N	NA
27311	27312	jhp0457	jhp0458			TRUE	0.706	11.000	0.000	NA		NA
27312	27313	jhp0458	jhp0459		glcD	TRUE	0.710	5.000	0.000	NA		NA
27313	27314	jhp0459	jhp0460	glcD	dapB	TRUE	0.727	23.000	0.009	1.000	N	NA
27316	27317	jhp0462	jhp0463		rplI	FALSE	0.286	63.000	0.005	NA		NA
27317	27318	jhp0463	jhp0464	rplI	hslV	TRUE	0.944	4.000	0.034	1.000	N	NA
27318	27319	jhp0464	jhp0465	hslV	hslU	TRUE	0.985	0.000	0.752	1.000	Y	NA
27319	27320	jhp0465	jhp0466	hslU	era	TRUE	0.936	0.000	0.051	1.000		NA
27320	27321	jhp0466	jhp0467	era		TRUE	0.946	-3.000	0.125	NA		NA
27323	27324	jhp0469	jhp0470	orf6	orf7	FALSE	0.048	143.000	0.000	NA		NA
27324	27325	jhp0470	jhp0471	orf7	orf8	TRUE	0.964	-7.000	0.429	NA		NA
27325	27326	jhp0471	jhp0472	orf8	orf9	TRUE	0.982	10.000	0.778	NA		NA
27327	27328	jhp0473	jhp0474	virD4	virB11_1	TRUE	0.986	9.000	0.429	1.000	Y	NA
27328	27329	jhp0474	jhp0475	virB11_1	orf12	TRUE	0.976	5.000	0.583	NA		NA
27329	27330	jhp0475	jhp0476	orf12	orf13/14	FALSE	0.390	135.000	0.286	NA		NA
27330	27331	jhp0476	jhp0477	orf13/14	orf15	TRUE	0.949	15.000	0.150	1.000	N	NA
27331	27332	jhp0477	jhp0478	orf15	orf16	TRUE	0.693	53.000	0.150	NA		NA
27332	27333	jhp0478	jhp0479	orf16	orf17	TRUE	0.972	5.000	0.444	NA		NA
27334	27335	jhp0480	jhp0481	orf18	cagT	FALSE	0.284	36.000	0.000	NA		NA
27336	27337	jhp0482	jhp0483	cagS	cagQ	FALSE	0.008	439.000	0.000	NA		NA
27337	27338	jhp0483	jhp0484	cagQ	cagP	FALSE	0.008	427.000	0.000	NA		NA
27339	27340	jhp0485	jhp0486	cagM	cagN	TRUE	0.971	15.000	1.000	NA		NA
27341	27342	jhp0487	jhp0488	cagL	cagI	TRUE	0.675	-3.000	0.000	NA		NA
27342	27343	jhp0488	jhp0489	cagI	cagH	TRUE	0.981	11.000	0.857	NA		NA
27343	27344	jhp0489	jhp0490	cagH	cagG	TRUE	0.929	17.000	0.333	NA		NA
27344	27345	jhp0490	jhp0491	cagG	cagF	TRUE	0.780	55.000	0.500	NA		NA
27345	27346	jhp0491	jhp0492	cagF	cagE	TRUE	0.946	2.000	0.231	NA		NA
27346	27347	jhp0492	jhp0493	cagE	cagD	TRUE	0.966	9.000	0.231	NA		NA
27347	27348	jhp0493	jhp0494	cagD	cagC	TRUE	0.975	2.000	1.000	NA		NA
27350	27351	jhp0496	jhp0497	murI	rho	TRUE	0.692	40.000	0.023	1.000	N	NA
27352	27353	jhp0498	jhp0499	rpmE		TRUE	0.786	24.000	0.031	1.000		NA
27353	27354	jhp0499	jhp0500			TRUE	0.912	14.000	0.031	1.000		NA
27354	27355	jhp0500	jhp0501			TRUE	0.903	13.000	0.033	NA		NA
27355	27356	jhp0501	jhp0502			TRUE	0.979	-3.000	0.882	NA		NA
27357	27358	jhp0503	jhp0504		accA	FALSE	0.007	482.000	0.000	NA		NA
27358	27359	jhp0504	jhp0505	accA	fabB	TRUE	0.890	22.000	0.046	1.000	Y	NA
27359	27360	jhp0505	jhp0506	fabB	acpP	TRUE	0.556	103.000	0.066	1.000	Y	NA
27360	27361	jhp0506	jhp0507	acpP		FALSE	0.327	53.000	0.004	NA		NA
27361	27362	jhp0507	jhp0508		fabG	FALSE	0.173	98.000	0.005	NA		NA
27362	27363	jhp0508	jhp0509	fabG	rpsU	TRUE	0.636	39.000	0.017	1.000		NA
27363	27364	jhp0509	jhp0510	rpsU		FALSE	0.477	101.000	0.154	NA		NA
27366	27367	jhp0512	jhp0513		dapF	FALSE	0.178	113.000	0.009	NA		NA
27369	27370	jhp0515	jhp0516			FALSE	0.110	144.000	0.009	NA		NA
27370	27371	jhp0516	jhp0517		pepA	TRUE	0.918	2.000	0.026	1.000	N	NA
27371	27372	jhp0517	jhp0518	pepA		TRUE	0.763	48.000	0.250	NA		NA
27372	27373	jhp0518	jhp0519		apt	TRUE	0.860	15.000	0.026	NA		NA
27373	27374	jhp0519	jhp0520	apt		FALSE	0.482	61.000	0.028	NA		NA
27374	27375	jhp0520	jhp0521		rpi	TRUE	0.757	51.000	0.277	NA		NA
27375	27376	jhp0521	jhp0522	rpi		TRUE	0.864	19.000	0.042	1.000		NA
27376	27377	jhp0522	jhp0523		lepB	TRUE	0.983	9.000	0.055	0.025		NA
27377	27378	jhp0523	jhp0524	lepB	folD	TRUE	0.958	0.000	0.117	1.000	N	NA
27378	27379	jhp0524	jhp0525	folD		FALSE	0.471	86.000	0.025	1.000	N	NA
27379	27380	jhp0525	jhp0526			TRUE	0.980	9.000	0.727	NA		NA
27380	27381	jhp0526	jhp0527			TRUE	0.964	7.000	0.216	NA		NA
27381	27382	jhp0527	jhp0528		pyrC_2	TRUE	0.904	-24.000	0.018	1.000	N	NA
27382	27383	jhp0528	jhp0529	pyrC_2	tonB_1	TRUE	0.930	5.000	0.015	1.000	N	NA
27383	27384	jhp0529	jhp0530	tonB_1		TRUE	0.955	-16.000	0.333	NA		NA
27384	27385	jhp0530	jhp0531		fliN	TRUE	0.960	-3.000	0.281	NA		NA
27385	27386	jhp0531	jhp0532	fliN	nth	FALSE	0.373	82.000	0.009	1.000	N	NA
27386	27387	jhp0532	jhp0533	nth		TRUE	0.907	-3.000	0.011	1.000	N	NA
27387	27388	jhp0533	jhp0534			TRUE	0.962	-3.000	0.303	NA		NA
27389	27390	jhp0535	jhp0536		oorD	FALSE	0.084	185.000	0.012	NA		NA
27390	27391	jhp0536	jhp0537	oorD	oorA	TRUE	0.993	0.000	0.316	0.003	Y	NA
27391	27392	jhp0537	jhp0538	oorA	oorB	TRUE	0.995	2.000	0.771	0.003	Y	NA
27392	27393	jhp0538	jhp0539	oorB	oorC	TRUE	0.993	0.000	0.324	0.003	Y	NA
27393	27394	jhp0539	jhp0540	oorC		FALSE	0.120	114.000	0.000	1.000		NA
27394	27395	jhp0540	jhp0541			FALSE	0.041	159.000	0.000	NA		NA
27395	27396	jhp0541	jhp0542			TRUE	0.980	10.000	0.667	NA		NA
27396	27397	jhp0542	jhp0543			FALSE	0.007	469.000	0.000	NA		NA
27398	27399	jhp0544	jhp0545		bioF	TRUE	0.944	0.000	0.050	1.000	N	NA
27399	27400	jhp0545	jhp0546	bioF		TRUE	0.830	23.000	0.033	1.000	N	NA
27400	27401	jhp0546	jhp0547			TRUE	0.625	72.000	0.069	1.000	N	NA
27402	27403	jhp0548	jhp0549	flaA		FALSE	0.389	118.000	0.042	1.000	N	NA
27403	27404	jhp0549	jhp0550			TRUE	0.918	-3.000	0.042	NA		NA
27404	27405	jhp0550	jhp0551		hemE	FALSE	0.328	69.000	0.010	NA		NA
27405	27406	jhp0551	jhp0552	hemE		TRUE	0.925	10.000	0.010	1.000	N	NA
27406	27407	jhp0552	jhp0553			TRUE	0.983	11.000	0.655	1.000	N	NA
27407	27408	jhp0553	jhp0554			TRUE	0.986	13.000	0.844	1.000	Y	NA
27408	27409	jhp0554	jhp0555			TRUE	0.985	-3.000	0.281	0.063		NA
27409	27410	jhp0555	jhp0556			TRUE	0.691	163.000	0.600	0.015		NA
27411	27412	jhp0557	jhp0558		lig	FALSE	0.101	173.000	0.008	1.000		NA
27413	27414	jhp0559	jhp0560	cheV_2	aspS	TRUE	0.653	35.000	0.010	1.000	N	NA
27414	27415	jhp0560	jhp0561	aspS	adk	TRUE	0.934	12.000	0.025	1.000	N	NA
27415	27416	jhp0561	jhp0562	adk		TRUE	0.864	25.000	0.114	1.000	N	NA
27416	27417	jhp0562	jhp0563			TRUE	0.881	19.000	0.000	0.008		NA
27417	27418	jhp0563	jhp0564		ppa	FALSE	0.501	56.000	0.013	1.000		NA
27419	27420	jhp0565	jhp0566	mutS		TRUE	0.858	-39.000	0.021	NA		NA
27420	27421	jhp0566	jhp0567		murC	TRUE	0.859	0.000	0.013	NA		NA
27421	27422	jhp0567	jhp0568	murC		TRUE	0.915	-7.000	0.016	1.000	N	NA
27423	27424	jhp0569	jhp0570		dapD	TRUE	0.892	3.000	0.009	1.000	N	NA
27424	27425	jhp0570	jhp0571	dapD		TRUE	0.962	12.000	0.164	1.000		NA
27425	27426	jhp0571	jhp0572			FALSE	0.148	213.000	0.100	NA		NA
27428	27429	jhp0574	jhp0575	hyaA	hyaB	TRUE	0.997	10.000	0.951	0.002	Y	NA
27429	27430	jhp0575	jhp0576	hyaB	hyaC	TRUE	0.990	13.000	0.270	0.038	Y	NA
27430	27431	jhp0576	jhp0577	hyaC	hyaD	TRUE	0.978	-3.000	0.277	1.000	Y	NA
27431	27432	jhp0577	jhp0578	hyaD		TRUE	0.940	2.000	0.171	NA		NA
27433	27434	jhp0579	jhp0580			TRUE	0.638	119.000	1.000	NA		NA
27437	27438	jhp0583	jhp0584	pcnB		TRUE	0.727	21.000	0.014	NA		NA
27438	27439	jhp0584	jhp0585			TRUE	0.923	15.000	0.121	NA		NA
27439	27440	jhp0585	jhp0586			TRUE	0.959	2.000	0.185	1.000	N	NA
27442	27443	jhp0588	jhp0589	gltX_2		TRUE	0.952	-3.000	0.088	1.000		NA
27443	27444	jhp0589	jhp0590			TRUE	0.950	9.000	0.080	NA		NA
27444	27445	jhp0590	jhp0591		galU	TRUE	0.974	-3.000	0.323	NA	Y	NA
27445	27446	jhp0591	jhp0592	galU		TRUE	0.971	12.000	0.533	NA		NA
27446	27447	jhp0592	jhp0593		murA	TRUE	0.872	3.000	0.017	NA		NA
27447	27448	jhp0593	jhp0594	murA	aspA	TRUE	0.565	58.000	0.020	1.000	N	NA
27448	27449	jhp0594	jhp0595	aspA		TRUE	0.962	6.000	0.071	1.000	N	NA
27450	27451	jhp0596	jhp0597	fucT	serB	TRUE	0.563	38.000	0.009	1.000		NA
27451	27452	jhp0597	jhp0598	serB	pfr	TRUE	0.882	15.000	0.014	1.000	N	NA
27453	27454	jhp0599	jhp0600			FALSE	0.450	83.000	0.018	1.000	N	NA
27454	27455	jhp0600	jhp0601			TRUE	0.926	2.000	0.033	1.000	N	NA
27455	27456	jhp0601	jhp0602			TRUE	0.965	6.000	0.130	1.000		NA
27456	27457	jhp0602	jhp0603		gatB	TRUE	0.879	0.000	0.010	1.000		NA
27457	27458	jhp0603	jhp0604	gatB		TRUE	0.869	0.000	0.008	1.000		NA
27458	27459	jhp0604	jhp0605			TRUE	0.977	10.000	0.308	1.000		NA
27459	27460	jhp0605	jhp0606		rnhA	TRUE	0.832	2.000	0.006	1.000		NA
27460	27461	jhp0606	jhp0607	rnhA	rnc	TRUE	0.940	12.000	0.032	1.000	N	NA
27461	27462	jhp0607	jhp0608	rnc	aroC	TRUE	0.937	-3.000	0.030	1.000	N	NA
27462	27463	jhp0608	jhp0609	aroC		FALSE	0.464	37.000	0.008	NA		NA
27463	27464	jhp0609	jhp0610		hemN_1	TRUE	0.963	0.000	0.419	NA		NA
27464	27465	jhp0610	jhp0611	hemN_1	glpC	TRUE	0.991	-3.000	0.419	0.019	N	NA
27465	27466	jhp0611	jhp0612	glpC		TRUE	0.583	78.000	0.074	1.000		NA
27466	27467	jhp0612	jhp0613			TRUE	0.738	2.000	0.000	1.000		NA
27467	27468	jhp0613	jhp0614			FALSE	0.016	249.000	0.000	NA		NA
27468	27469	jhp0614	jhp0615		aspB	FALSE	0.230	160.000	0.082	NA		NA
27469	27470	jhp0615	jhp0616	aspB		FALSE	0.172	167.000	0.041	NA		NA
27470	27471	jhp0616	jhp0617			TRUE	0.908	15.000	0.071	NA		NA
27472	27473	jhp0618	jhp0619	ogt		TRUE	0.937	0.000	0.054	1.000		NA
27473	27474	jhp0619	jhp0620			FALSE	0.336	125.000	0.047	1.000		NA
27474	27475	jhp0620	jhp0621		nrdA	TRUE	0.612	62.000	0.054	1.000		NA
27475	27476	jhp0621	jhp0622	nrdA		FALSE	0.222	172.000	0.114	NA		NA
27476	27477	jhp0622	jhp0623			TRUE	0.815	40.000	0.333	NA		NA
27477	27478	jhp0623	jhp0624		glmU	FALSE	0.047	192.000	0.002	NA		NA
27480	27481	jhp0626	jhp0627	fecA_1	feoB	FALSE	0.049	256.000	0.000	1.000	Y	NA
27482	27483	jhp0628	jhp0629			TRUE	0.685	53.000	0.024	1.000	Y	NA
27483	27484	jhp0629	jhp0630			TRUE	0.959	3.000	0.333	NA		NA
27485	27486	jhp0631	jhp0632			TRUE	0.949	24.000	0.882	NA	Y	NA
27486	27487	jhp0632	jhp0633			TRUE	0.874	12.000	0.000	1.000	Y	NA
27487	27488	jhp0633	jhp0634			FALSE	0.018	231.000	0.000	NA		NA
27488	27489	jhp0634	jhp0635		atoE	FALSE	0.440	129.000	0.348	NA		NA
27489	27490	jhp0635	jhp0636	atoE	scoB	TRUE	0.919	20.000	0.074	1.000	Y	NA
27490	27491	jhp0636	jhp0637	scoB	scoA	TRUE	0.991	-3.000	0.083	0.002	Y	NA
27491	27492	jhp0637	jhp0638	scoA	thl	TRUE	0.984	11.000	0.429	1.000	Y	NA
27493	27494	jhp0639	jhp0640		dgkA	TRUE	0.969	-7.000	0.562	NA		NA
27494	27495	jhp0640	jhp0641	dgkA	gyrA	TRUE	0.837	16.000	0.009	1.000	N	NA
27495	27496	jhp0641	jhp0642	gyrA		TRUE	0.852	0.000	0.012	NA		NA
27496	27497	jhp0642	jhp0643			TRUE	0.960	-3.000	0.282	NA		NA
27499	27500	jhp0645	jhp0646	hopE		FALSE	0.078	172.000	0.008	NA		NA
27500	27501	jhp0646	jhp0647			TRUE	0.791	21.000	0.031	NA		NA
27501	27502	jhp0647	jhp0648			FALSE	0.019	473.000	0.010	NA		NA
27502	27503	jhp0648	jhp0649			FALSE	0.018	234.000	0.000	NA		NA
27503	27504	jhp0649	jhp0650			FALSE	0.085	190.000	0.015	NA		NA
27504	27505	jhp0650	jhp0651			TRUE	0.880	0.000	0.020	NA		NA
27506	27507	jhp0652	jhp0653	rpoN		TRUE	0.931	3.000	0.044	1.000		NA
27507	27508	jhp0653	jhp0654			TRUE	0.849	13.000	0.006	1.000		NA
27508	27509	jhp0654	jhp0655		dnaX	TRUE	0.955	-3.000	0.006	0.022		NA
27509	27510	jhp0655	jhp0656	dnaX		FALSE	0.427	67.000	0.011	1.000		NA
27511	27512	jhp0657	jhp0658			TRUE	0.872	28.000	0.462	NA		NA
27512	27513	jhp0658	jhp0659			FALSE	0.012	316.000	0.000	NA		NA
27516	27517	jhp0662	jhp0663			FALSE	0.020	221.000	0.000	NA		NA
27517	27518	jhp0663	jhp0664			TRUE	0.811	-30.000	0.009	NA		NA
27518	27519	jhp0664	jhp0665			TRUE	0.597	94.000	0.005	0.008	N	NA
27519	27520	jhp0665	jhp0666			FALSE	0.431	36.000	0.004	NA		NA
27520	27521	jhp0666	jhp0667			TRUE	0.975	9.000	0.455	NA		NA
27521	27522	jhp0667	jhp0668			TRUE	0.557	116.000	0.545	NA		NA
27522	27523	jhp0668	jhp0669			TRUE	0.953	-10.000	0.250	NA		NA
27523	27524	jhp0669	jhp0670			FALSE	0.311	57.000	0.006	NA		NA
27524	27525	jhp0670	jhp0671			FALSE	0.216	103.000	0.004	1.000		NA
27525	27526	jhp0671	jhp0672		gpt	TRUE	0.889	2.000	0.017	1.000		NA
27526	27527	jhp0672	jhp0673	gpt		TRUE	0.945	9.000	0.032	1.000		NA
27528	27529	jhp0674	jhp0675	pgpA	ddl	FALSE	0.479	77.000	0.018	1.000	N	NA
27529	27530	jhp0675	jhp0676	ddl		TRUE	0.907	1.000	0.046	NA		NA
27530	27531	jhp0676	jhp0677		murF	TRUE	0.939	-13.000	0.129	NA		NA
27531	27532	jhp0677	jhp0678	murF		TRUE	0.962	10.000	0.061	1.000	N	NA
27532	27533	jhp0678	jhp0679		prsA	TRUE	0.655	65.000	0.030	1.000	Y	NA
3446262	27534	jhp_t13	jhp0680		rodA_1	TRUE	0.607	-38.000	0.000	NA		NA
27534	27535	jhp0680	jhp0681	rodA_1		TRUE	0.522	23.000	0.000	1.000		NA
27536	27537	jhp0682	jhp0683			TRUE	0.878	-49.000	0.031	NA		NA
27537	27538	jhp0683	jhp0684			TRUE	0.937	11.000	0.060	NA		NA
27538	27539	jhp0684	jhp0685			TRUE	0.921	-25.000	0.044	1.000		NA
27539	27540	jhp0685	jhp0686			TRUE	0.973	-13.000	0.431	1.000	N	NA
27540	27541	jhp0686	jhp0687			TRUE	0.944	-7.000	0.045	NA	Y	NA
27541	27542	jhp0687	jhp0688			FALSE	0.408	97.000	0.043	NA	N	NA
27542	27543	jhp0688	jhp0689		fliD	TRUE	0.922	17.000	0.092	NA	Y	NA
27543	27544	jhp0689	jhp0690	fliD	fliS	TRUE	0.971	42.000	0.608	0.003	Y	NA
27544	27545	jhp0690	jhp0691	fliS		TRUE	0.933	-13.000	0.101	NA		NA
27545	27546	jhp0691	jhp0692			FALSE	0.486	53.000	0.018	NA		NA
27546	27547	jhp0692	jhp0693			TRUE	0.610	-34.000	0.000	NA		NA
27547	27548	jhp0693	jhp0694			TRUE	0.689	4.000	0.000	NA		NA
27548	27549	jhp0694	jhp0695			FALSE	0.331	127.000	0.048	1.000		NA
27549	27550	jhp0695	jhp0696			TRUE	0.666	63.000	0.098	1.000		NA
27551	27552	jhp0697	jhp0698			TRUE	0.931	-100.000	0.059	1.000	N	NA
27553	27554	jhp0699	jhp0700		ftsY	TRUE	0.881	6.000	0.011	NA		NA
27555	27556	jhp0701	jhp0702			FALSE	0.320	28.000	0.000	NA		NA
27556	27557	jhp0702	jhp0703			TRUE	0.917	-49.000	0.087	NA		NA
27557	27558	jhp0703	jhp0704			TRUE	0.682	12.000	0.000	NA		NA
27558	27559	jhp0704	jhp0705		moaA	FALSE	0.009	365.000	0.000	NA		NA
27560	27561	jhp0706	jhp0707	mobA	flhB_1	TRUE	0.914	-31.000	0.026	1.000	N	NA
27562	27563	jhp0708	jhp0709		amiA	TRUE	0.867	19.000	0.084	NA		NA
27563	27564	jhp0709	jhp0710	amiA		TRUE	0.957	7.000	0.068	1.000		NA
27564	27565	jhp0710	jhp0711		tyrS	TRUE	0.864	17.000	0.029	1.000		NA
27565	27566	jhp0711	jhp0712	tyrS	spoT	TRUE	0.927	20.000	0.222	1.000	N	NA
27566	27567	jhp0712	jhp0713	spoT		TRUE	0.950	-13.000	0.039	1.000	Y	NA
27567	27568	jhp0713	jhp0714		pyrH	TRUE	0.713	42.000	0.033	1.000	N	NA
27568	27569	jhp0714	jhp0715	pyrH		FALSE	0.222	91.000	0.008	NA		NA
27570	27571	jhp0716	jhp0717	acnB		FALSE	0.374	81.000	0.023	NA		NA
27571	27572	jhp0717	jhp0718			FALSE	0.013	295.000	0.000	NA		NA
27572	27573	jhp0718	jhp0719			FALSE	0.103	94.000	0.000	NA		NA
27577	27578	jhp0723	jhp0724	secA		TRUE	0.983	-10.000	0.201	0.081	N	NA
27578	27579	jhp0724	jhp0725			FALSE	0.023	279.000	0.000	1.000		NA
27580	27581	jhp0726	jhp0727	hsdS_4	hmcT	TRUE	0.817	44.000	0.182	1.000	N	NA
27581	27582	jhp0727	jhp0728	hmcT		TRUE	0.742	25.000	0.014	1.000	N	NA
27582	27583	jhp0728	jhp0729		def	TRUE	0.958	6.000	0.054	1.000	N	NA
27583	27584	jhp0729	jhp0730	def	clpP	TRUE	0.946	5.000	0.030	1.000	N	NA
27584	27585	jhp0730	jhp0731	clpP	tig	TRUE	0.950	21.000	0.351	1.000	Y	NA
27585	27586	jhp0731	jhp0732	tig		FALSE	0.168	113.000	0.008	NA		NA
27586	27587	jhp0732	jhp0733		hpaA	TRUE	0.901	22.000	0.333	NA		NA
27587	27588	jhp0733	jhp0734	hpaA	moaC	FALSE	0.444	119.000	0.118	1.000		NA
27588	27589	jhp0734	jhp0735	moaC	mog	TRUE	0.988	9.000	0.028	0.005	Y	NA
27589	27590	jhp0735	jhp0736	mog	moaE	TRUE	0.983	13.000	0.026	0.005	Y	NA
27590	27591	jhp0736	jhp0737	moaE	moaD	TRUE	0.980	1.000	0.501	1.000	Y	NA
27591	27592	jhp0737	jhp0738	moaD	ribA	TRUE	0.658	49.000	0.012	1.000	Y	NA
27592	27593	jhp0738	jhp0739	ribA		FALSE	0.392	90.000	0.035	NA		NA
27593	27594	jhp0739	jhp0740		ribBA	TRUE	0.510	87.000	0.103	NA		NA
27594	27595	jhp0740	jhp0741	ribBA		TRUE	0.561	98.000	0.118	1.000	N	NA
27597	27598	jhp0743	jhp0744	fecA_2	acpS	FALSE	0.081	198.000	0.005	1.000	N	NA
27598	27599	jhp0744	jhp0745	acpS	fliL	TRUE	0.956	7.000	0.047	1.000	N	NA
27599	27600	jhp0745	jhp0746	fliL		TRUE	0.935	9.000	0.014	1.000	N	NA
27600	27601	jhp0746	jhp0747			TRUE	0.889	-21.000	0.032	NA		NA
27601	27602	jhp0747	jhp0748			FALSE	0.007	454.000	0.000	NA		NA
27603	27604	jhp0749	jhp0750		moeB	TRUE	0.912	1.000	0.028	1.000		NA
27604	27605	jhp0750	jhp0751	moeB	motA	TRUE	0.880	16.000	0.020	1.000	N	NA
27605	27606	jhp0751	jhp0752	motA	motB	TRUE	0.967	3.000	0.119	1.000	Y	NA
27606	27607	jhp0752	jhp0753	motB		TRUE	0.962	-3.000	0.320	NA		NA
27607	27608	jhp0753	jhp0754			FALSE	0.075	114.000	0.000	NA		NA
27609	27610	jhp0755	jhp0756			TRUE	0.972	-6.000	0.429	1.000		NA
27611	27612	jhp0757	jhp0758			TRUE	0.970	3.000	0.292	1.000	N	NA
27612	27613	jhp0758	jhp0759			FALSE	0.226	175.000	0.123	NA		NA
27613	27614	jhp0759	jhp0760		uvrC	TRUE	0.817	1.000	0.009	NA		NA
27614	27615	jhp0760	jhp0761	uvrC	hom	TRUE	0.916	10.000	0.008	1.000	N	NA
27615	27616	jhp0761	jhp0762	hom		TRUE	0.788	1.000	0.000	1.000	N	NA
27616	27617	jhp0762	jhp0763		trxA	FALSE	0.172	92.000	0.000	1.000		NA
27617	27618	jhp0763	jhp0764	trxA	trxB_1	TRUE	0.944	6.000	0.035	1.000		NA
27618	27619	jhp0764	jhp0765	trxB_1		FALSE	0.020	367.000	0.000	1.000	N	NA
27620	27621	jhp0766	jhp0767		atpB	FALSE	0.019	328.000	0.000	1.000		NA
27621	27622	jhp0767	jhp0768	atpB	guaB	FALSE	0.296	122.000	0.018	1.000	N	NA
27622	27623	jhp0768	jhp0769	guaB	gatA	TRUE	0.952	10.000	0.032	1.000	N	NA
27623	27624	jhp0769	jhp0770	gatA		FALSE	0.432	59.000	0.006	1.000	N	NA
27624	27625	jhp0770	jhp0771		speE	TRUE	0.902	2.000	0.016	1.000	N	NA
27625	27626	jhp0771	jhp0772	speE		FALSE	0.440	93.000	0.068	NA		NA
27627	27628	jhp0773	jhp0774			FALSE	0.147	141.000	0.008	1.000		NA
27628	3446263	jhp0774	jhp_t14			FALSE	0.182	57.000	0.000	NA		NA
3446263	27629	jhp_t14	jhp0775			FALSE	0.006	547.000	0.000	NA		NA
27629	27630	jhp0775	jhp0776			TRUE	0.885	20.000	0.156	NA		NA
27630	27631	jhp0776	jhp0777			TRUE	0.966	-3.000	0.421	NA		NA
27631	27632	jhp0777	jhp0778			TRUE	0.933	4.000	0.061	NA		NA
27632	27633	jhp0778	jhp0779		dfp	TRUE	0.880	-3.000	0.009	1.000		NA
27633	27634	jhp0779	jhp0780	dfp		TRUE	0.889	0.000	0.024	NA		NA
27635	27636	jhp0781	jhp0782	thiE	thiD	TRUE	0.989	-7.000	0.063	0.002	Y	NA
27636	27637	jhp0782	jhp0783	thiD	thiM	TRUE	0.984	-3.000	0.017	0.002	Y	NA
27637	27638	jhp0783	jhp0784	thiM	hsdR_2	FALSE	0.389	93.000	0.015	1.000	N	NA
27638	27639	jhp0784	jhp0785	hsdR_2	hsdS_2	FALSE	0.120	556.000	0.034	0.005		NA
27639	27640	jhp0785	jhp0786	hsdS_2	hsdM_2	TRUE	0.975	11.000	0.039	0.064		NA
27642	27643	jhp0788	jhp0789			TRUE	0.889	-3.000	0.020	NA		NA
27645	27646	jhp0791	jhp0792	gmhA	waaE	TRUE	0.962	-7.000	0.142	1.000	N	NA
27646	27647	jhp0792	jhp0793	waaE	gmhD	TRUE	0.989	-3.000	0.096	0.009	Y	NA
27647	27648	jhp0793	jhp0794	gmhD		TRUE	0.968	10.000	0.093	1.000	N	NA
27648	27649	jhp0794	jhp0795			TRUE	0.902	-13.000	0.036	NA		NA
27649	27650	jhp0795	jhp0796			TRUE	0.847	-9.000	0.011	NA		NA
27650	27651	jhp0796	jhp0797			TRUE	0.854	5.000	0.008	NA		NA
27651	27652	jhp0797	jhp0798			TRUE	0.960	5.000	0.200	NA		NA
27652	27653	jhp0798	jhp0799		dut	TRUE	0.880	-3.000	0.017	NA		NA
27653	27654	jhp0799	jhp0800	dut	greA	TRUE	0.918	-10.000	0.019	1.000	N	NA
27654	27655	jhp0800	jhp0801	greA	lpxB	TRUE	0.736	41.000	0.042	1.000	N	NA
27655	27656	jhp0801	jhp0802	lpxB		TRUE	0.862	0.000	0.013	NA		NA
27656	27657	jhp0802	jhp0803		hypA	TRUE	0.943	7.000	0.062	NA		NA
27657	27658	jhp0803	jhp0804	hypA	flgE	TRUE	0.651	59.000	0.071	1.000		NA
27658	27659	jhp0804	jhp0805	flgE	cdh	FALSE	0.047	209.000	0.000	1.000	N	NA
27661	27662	jhp0807	jhp0808			TRUE	0.752	85.000	0.889	NA		NA
27662	27663	jhp0808	jhp0809		katA	FALSE	0.368	148.000	0.333	NA		NA
27667	27668	jhp0813	jhp0814			TRUE	0.596	-91.000	0.000	NA		NA
27668	27669	jhp0814	jhp0815		ruvA	FALSE	0.066	123.000	0.000	NA		NA
27669	27670	jhp0815	jhp0816	ruvA		TRUE	0.525	27.000	0.008	NA		NA
27671	27672	jhp0817	jhp0818		cysS	TRUE	0.910	1.000	0.027	1.000		NA
27672	27673	jhp0818	jhp0819	cysS	vacA	FALSE	0.022	287.000	0.000	1.000		NA
27674	27675	jhp0820	jhp0821		fecE	TRUE	0.750	64.000	0.222	1.000	N	NA
27675	27676	jhp0821	jhp0822	fecE	fecD	TRUE	0.988	0.000	1.000	1.000	Y	NA
27676	27677	jhp0822	jhp0823	fecD		TRUE	0.963	-7.000	0.222	1.000		NA
27679	27680	jhp0825	jhp0826		tnpB	FALSE	0.044	149.000	0.000	NA		NA
27682	27683	jhp0828	jhp0829			FALSE	0.155	68.000	0.000	NA		NA
27683	27684	jhp0829	jhp0830			FALSE	0.010	364.000	0.000	NA		NA
27684	27685	jhp0830	jhp0831			FALSE	0.227	48.000	0.000	NA		NA
27685	27686	jhp0831	jhp0832			TRUE	0.957	14.000	0.400	NA		NA
27686	27687	jhp0832	jhp0833		babA	FALSE	0.006	496.000	0.000	NA		NA
27687	3446264	jhp0833	jhp_t15	babA		FALSE	0.009	375.000	0.000	NA		NA
3446264	3446265	jhp_t15	jhp_t16			FALSE	0.298	33.000	0.000	NA		NA
3446265	27688	jhp_t16	jhp0834			FALSE	0.008	439.000	0.000	NA		NA
27688	27689	jhp0834	jhp0835		hypD	TRUE	0.924	-33.000	0.000	0.011		NA
27689	27690	jhp0835	jhp0836	hypD	hypC	TRUE	0.941	15.000	0.084	NA	Y	NA
27690	27691	jhp0836	jhp0837	hypC	hypB	TRUE	0.976	0.000	0.463	NA	Y	NA
27691	27692	jhp0837	jhp0838	hypB		FALSE	0.252	113.000	0.021	NA		NA
27692	27693	jhp0838	jhp0839			TRUE	0.930	11.000	0.045	NA		NA
27693	27694	jhp0839	jhp0840		ackA	TRUE	0.914	0.000	0.045	NA		NA
27694	27695	jhp0840	jhp0841	ackA	pta	TRUE	0.970	12.000	0.103	1.000	Y	NA
27696	27697	jhp0842	jhp0843			TRUE	0.655	51.000	0.079	NA		NA
27697	27698	jhp0843	jhp0844			TRUE	0.975	-3.000	0.368	NA	Y	NA
27698	27699	jhp0844	jhp0845			TRUE	0.810	52.000	0.571	NA		NA
27699	27700	jhp0845	jhp0846			TRUE	0.959	10.000	0.127	NA		NA
27700	27701	jhp0846	jhp0847			TRUE	0.985	9.000	0.048	0.062	Y	NA
27701	27702	jhp0847	jhp0848		hopC	FALSE	0.005	1164.000	0.000	NA		NA
27702	27703	jhp0848	jhp0849	hopC	hopB	TRUE	0.905	22.000	0.375	NA		NA
27704	27705	jhp0850	jhp0851		frpB_2	FALSE	0.018	338.000	0.000	1.000		NA
27705	27706	jhp0851	jhp0852	frpB_2		FALSE	0.121	176.000	0.022	NA		NA
27706	27707	jhp0852	jhp0853		carB	TRUE	0.905	5.000	0.020	NA		NA
27707	27708	jhp0853	jhp0854	carB		FALSE	0.232	100.000	0.011	NA		NA
27709	27710	jhp0855	jhp0856	gap_1		TRUE	0.705	81.000	0.368	1.000		NA
27710	27711	jhp0856	jhp0857			TRUE	0.792	53.000	0.500	NA		NA
27713	27714	jhp0859	jhp0860	recR		TRUE	0.876	-3.000	0.008	1.000		NA
27714	27715	jhp0860	jhp0861		htpX	TRUE	0.921	-13.000	0.034	1.000		NA
27715	27716	jhp0861	jhp0862	htpX	folE_1	TRUE	0.945	1.000	0.102	1.000		NA
27716	27717	jhp0862	jhp0863	folE_1	folE_2	FALSE	0.143	255.000	0.000	0.002		NA
27717	27718	jhp0863	jhp0864	folE_2	ispA	TRUE	0.955	16.000	0.167	1.000	Y	NA
27718	27719	jhp0864	jhp0865	ispA	surE	TRUE	0.936	-3.000	0.041	1.000		NA
27719	27720	jhp0865	jhp0866	surE		TRUE	0.806	-3.000	0.006	NA		NA
27720	27721	jhp0866	jhp0867			TRUE	0.791	2.000	0.008	NA		NA
27721	27722	jhp0867	jhp0868			TRUE	0.964	-3.000	0.139	1.000	N	NA
27722	27723	jhp0868	jhp0869			FALSE	0.361	92.000	0.015	1.000		NA
27723	27724	jhp0869	jhp0870			FALSE	0.019	226.000	0.000	NA		NA
27725	27726	jhp0871	jhp0872	proP		FALSE	0.014	283.000	0.000	NA		NA
27726	27727	jhp0872	jhp0873			TRUE	0.722	7.000	0.000	NA		NA
27727	27728	jhp0873	jhp0874			FALSE	0.342	72.000	0.013	NA		NA
27728	27729	jhp0874	jhp0875			TRUE	0.992	-16.000	0.594	0.039	Y	NA
27729	27730	jhp0875	jhp0876		alr	TRUE	0.636	66.000	0.056	1.000	N	NA
27730	27731	jhp0876	jhp0877	alr		TRUE	0.977	7.000	0.267	1.000	N	NA
27731	27732	jhp0877	jhp0878		dadA	TRUE	0.876	41.000	0.267	1.000	Y	NA
27732	27733	jhp0878	jhp0879	dadA		TRUE	0.928	23.000	0.667	NA	N	NA
3446266	3446267	jhp_t17	jhp_t18			FALSE	0.260	40.000	0.000	NA		NA
3446267	3446268	jhp_t18	jhp_t19			FALSE	0.195	54.000	0.000	NA		NA
3446268	3446269	jhp_t19	jhp_t20			FALSE	0.217	50.000	0.000	NA		NA
3446269	27734	jhp_t20	jhp0880			FALSE	0.062	127.000	0.000	NA		NA
27734	27735	jhp0880	jhp0881			FALSE	0.011	325.000	0.000	NA		NA
27736	27737	jhp0882	jhp0883			TRUE	0.898	10.000	0.013	NA		NA
27737	27738	jhp0883	jhp0884		accD	TRUE	0.893	14.000	0.035	NA		NA
27739	27740	jhp0885	jhp0886			TRUE	0.931	11.000	0.047	NA		NA
27741	27742	jhp0887	jhp0888			TRUE	0.821	65.000	1.000	NA		NA
27742	27743	jhp0888	jhp0889		lgt	TRUE	0.907	0.000	0.013	1.000	N	NA
27743	27744	jhp0889	jhp0890	lgt		TRUE	0.931	9.000	0.013	1.000	N	NA
27744	27745	jhp0890	jhp0891		waaA	TRUE	0.924	18.000	0.133	1.000	N	NA
27745	27746	jhp0891	jhp0892	waaA		TRUE	0.936	1.000	0.122	NA		NA
27746	27747	jhp0892	jhp0893			TRUE	0.972	10.000	0.342	NA		NA
27747	27748	jhp0893	jhp0894		glyQ	TRUE	0.899	2.000	0.041	NA		NA
27748	27749	jhp0894	jhp0895	glyQ	gpsA	TRUE	0.894	14.000	0.013	1.000	N	NA
27749	27750	jhp0895	jhp0896	gpsA		FALSE	0.014	277.000	0.000	NA		NA
27750	27751	jhp0896	jhp0897			FALSE	0.089	356.000	0.200	NA		NA
27751	27752	jhp0897	jhp0898			TRUE	0.962	-3.000	0.300	NA		NA
27752	27753	jhp0898	jhp0899			TRUE	0.650	66.000	0.182	NA		NA
27753	27754	jhp0899	jhp0900			TRUE	0.965	0.000	0.455	NA		NA
27754	27755	jhp0900	jhp0901			TRUE	0.732	60.000	0.375	NA		NA
27755	27756	jhp0901	jhp0902			FALSE	0.009	374.000	0.000	NA		NA
27756	27757	jhp0902	jhp0903		czcA_1	TRUE	0.949	16.000	0.514	NA		NA
27757	27758	jhp0903	jhp0904	czcA_1	czcB_1	TRUE	0.970	0.000	0.464	NA	N	NA
27758	27759	jhp0904	jhp0905	czcB_1		TRUE	0.985	-3.000	0.857	NA	Y	NA
27759	27760	jhp0905	jhp0906		glyS	TRUE	0.904	-10.000	0.013	1.000	N	NA
27761	27762	jhp0907	jhp0908		pgm	TRUE	0.861	13.000	0.013	NA		NA
27762	27763	jhp0908	jhp0909	pgm	gatC	TRUE	0.863	15.000	0.009	1.000	N	NA
27765	27766	jhp0911	jhp0912		ftsA	TRUE	0.937	16.000	0.184	1.000		NA
27766	27767	jhp0912	jhp0913	ftsA	ftsZ	FALSE	0.495	128.000	0.114	1.000	Y	NA
27768	27769	jhp0914	jhp0915			FALSE	0.010	347.000	0.000	NA		NA
27769	27770	jhp0915	jhp0916			FALSE	0.333	140.000	0.182	NA		NA
27771	27772	jhp0917	jhp0918	virB4_2	virB4_3	TRUE	0.647	-12.000	0.000	NA		NA
27772	27773	jhp0918	jhp0919	virB4_3	topA_2	FALSE	0.279	37.000	0.000	NA		NA
27773	27774	jhp0919	jhp0920	topA_2		FALSE	0.009	375.000	0.000	NA		NA
27774	27775	jhp0920	jhp0921			FALSE	0.056	130.000	0.000	NA		NA
27775	27776	jhp0921			jhp0922m	TRUE	0.981	0.000	0.750	NA	Y	NA
27776	27777		jhp0924	jhp0922m		TRUE	0.971	-3.000	0.571	NA		NA
27778	27779	jhp0925	jhp0926			TRUE	0.975	7.000	0.500	NA		NA
27780	27781	jhp0927	jhp0928			FALSE	0.043	150.000	0.000	NA		NA
27781	27782	jhp0928	jhp0929			TRUE	0.718	6.000	0.000	NA		NA
27782	27783	jhp0929	jhp0930			FALSE	0.075	114.000	0.000	NA		NA
27783	27784	jhp0930	jhp0931		topA_3	TRUE	0.657	13.000	0.000	NA		NA
27784	27785	jhp0931	jhp0932	topA_3		TRUE	0.691	55.000	0.182	NA		NA
27785	27786	jhp0932	jhp0933			TRUE	0.960	-30.000	0.500	NA		NA
27787	27788	jhp0934	jhp0935			TRUE	0.875	47.000	1.000	NA		NA
27789	27790	jhp0936	jhp0937			TRUE	0.973	-3.000	0.667	NA		NA
27790	27791	jhp0937	jhp0938			TRUE	0.962	12.000	0.286	NA		NA
27797	27798	jhp0944	jhp0945			TRUE	0.963	0.000	0.400	NA		NA
27798	27799	jhp0945	jhp0946			TRUE	0.593	-207.000	0.000	NA		NA
27799	27800	jhp0946	jhp0947			TRUE	0.911	27.000	0.833	NA		NA
27800	27801	jhp0947	jhp0948			TRUE	0.803	51.000	0.500	NA		NA
27801	27802	jhp0948	jhp0949			TRUE	0.625	2.000	0.000	NA		NA
27802	27803	jhp0949	jhp0950			FALSE	0.144	72.000	0.000	NA		NA
27804	1937534	jhp0951	jhpr1			FALSE	0.042	156.000	0.000	NA		NA
1937534	1937535	jhpr1	jhpr2			FALSE	0.018	231.000	0.000	NA		NA
27807	27808	jhp0954	jhp0955			FALSE	0.195	54.000	0.000	NA		NA
27808	27809	jhp0955	jhp0956			TRUE	0.600	109.000	0.600	NA		NA
27809	27810	jhp0956	jhp0957			TRUE	0.970	-12.000	0.667	NA		NA
27810	27811	jhp0957	jhp0958			FALSE	0.044	148.000	0.000	NA		NA
27811	27812	jhp0958	jhp0959			FALSE	0.119	86.000	0.000	NA		NA
27812	27813	jhp0959	jhp0960			FALSE	0.046	145.000	0.000	NA		NA
27813	27814	jhp0960	jhp0961			TRUE	0.957	2.000	0.400	NA		NA
27815	27816	jhp0962	jhp0963	speA		TRUE	0.915	14.000	0.024	1.000	N	NA
27816	27817	jhp0963	jhp0964			TRUE	0.955	5.000	0.093	NA	N	NA
27817	27818	jhp0964	jhp0965			TRUE	0.860	17.000	0.053	NA		NA
27818	27819	jhp0965	jhp0966			TRUE	0.915	4.000	0.033	NA		NA
27819	27820	jhp0966	jhp0967		metG	TRUE	0.863	1.000	0.009	1.000		NA
27822	27823	jhp0969	jhp0970			FALSE	0.006	565.000	0.000	NA		NA
27823	3446270	jhp0970	jhp_t21			FALSE	0.329	27.000	0.000	NA		NA
3446270	3446271	jhp_t21	jhp_t22			FALSE	0.421	22.000	0.000	NA		NA
3446271	3446272	jhp_t22	jhp_t23			FALSE	0.173	60.000	0.000	NA		NA
3446272	3446273	jhp_t23	jhp_t24			FALSE	0.159	67.000	0.000	NA		NA
3446273	27824	jhp_t24	jhp0971			FALSE	0.030	184.000	0.000	NA		NA
27824	27825	jhp0971	jhp0972		guaA	FALSE	0.304	84.000	0.007	1.000		NA
27825	27826	jhp0972	jhp0973	guaA		TRUE	0.818	-3.000	0.007	NA		NA
27826	27827	jhp0973	jhp0974			FALSE	0.421	180.000	0.875	NA		NA
27827	27828	jhp0974	jhp0975			TRUE	0.509	104.000	0.241	NA		NA
27828	27829	jhp0975	jhp0976			TRUE	0.801	26.000	0.105	NA		NA
27829	27830	jhp0976	jhp0977			TRUE	0.828	19.000	0.014	1.000	N	NA
27831	27832	jhp0978	jhp0979	pheS	pheT	TRUE	0.995	0.000	0.574	0.001	Y	NA
27832	27833	jhp0979	jhp0980	pheT	aroA	TRUE	0.853	20.000	0.028	1.000	N	NA
27833	27834	jhp0980	jhp0981	aroA	lytB	TRUE	0.932	-10.000	0.032	1.000	N	NA
27834	27835	jhp0981	jhp0982	lytB	rpsA	FALSE	0.397	122.000	0.058	1.000	N	NA
27835	27836	jhp0982	jhp0983	rpsA		FALSE	0.475	29.000	0.005	NA		NA
27836	27837	jhp0983	jhp0984		serA	TRUE	0.711	16.000	0.006	NA		NA
27837	27838	jhp0984	jhp0985	serA		TRUE	0.941	10.000	0.016	NA	Y	NA
27838	27839	jhp0985	jhp0986			TRUE	0.698	23.000	0.017	NA		NA
27839	27840	jhp0986	jhp0987			TRUE	0.850	2.000	0.015	NA		NA
27840	27841	jhp0987	jhp0988		cheV_3	TRUE	0.933	2.000	0.065	1.000		NA
27841	27842	jhp0988	jhp0989	cheV_3	cheA	TRUE	0.917	57.000	0.147	0.008	Y	NA
27842	27843	jhp0989	jhp0990	cheA	cheW	TRUE	0.990	-3.000	0.137	0.011	Y	NA
27845	27846	jhp0992	jhp0993	sodF		TRUE	0.583	54.000	0.018	1.000	N	NA
27847	27848	jhp0994	jhp0995	priA		TRUE	0.765	-15.000	0.003	NA		NA
27848	27849	jhp0995	jhp0996			TRUE	0.962	13.000	0.400	NA		NA
27852	27853	jhp0999	jhp1000		hemG	TRUE	0.953	-3.000	0.068	1.000	N	NA
27853	27854	jhp1000	jhp1001	hemG	gdhA	TRUE	0.534	67.000	0.020	1.000	N	NA
27855	27856	jhp1002	jhp1003	fucU		TRUE	0.984	10.000	0.118	0.074		NA
27856	27857	jhp1003	jhp1004			TRUE	0.989	10.000	0.750	1.000	Y	NA
27857	27858	jhp1004	jhp1005		hemH	TRUE	0.507	74.000	0.024	1.000	N	NA
27859	27860	jhp1006	jhp1007			TRUE	0.930	1.000	0.098	NA		NA
27861	27862	jhp1008	jhp1009		dcd	FALSE	0.074	169.000	0.007	NA		NA
27863	27864	jhp1010	jhp1011	accB	accC	TRUE	0.991	6.000	0.071	0.003	Y	NA
27864	27865	jhp1011	jhp1012	accC		FALSE	0.167	93.000	0.000	1.000		NA
27865	27866	jhp1012	jhp1013			TRUE	0.952	0.000	0.222	NA		NA
27866	27867	jhp1013	jhp1014			TRUE	0.691	94.000	0.778	NA		NA
27867	27868	jhp1014	jhp1015			TRUE	0.924	-3.000	0.053	NA		NA
27869	27870	jhp1016	jhp1017	nrdB	pcm	TRUE	0.976	10.000	0.227	1.000	N	NA
27870	27871	jhp1017	jhp1018	pcm		TRUE	0.755	22.000	0.012	1.000		NA
27871	27872	jhp1018	jhp1019		truA	TRUE	0.930	2.000	0.059	1.000		NA
3446275	3446276	jhp_t26	jhp_t27			FALSE	0.490	18.000	0.000	NA		NA
3446276	27875	jhp_t27	jhp1022			FALSE	0.005	631.000	0.000	NA		NA
27875	27876	jhp1022	jhp1023			TRUE	0.830	18.000	0.035	NA		NA
27877	27878	jhp1024	jhp1025		eda	TRUE	0.537	70.000	0.034	1.000		NA
27878	27879	jhp1025	jhp1026	eda	edd	TRUE	0.962	19.000	0.523	1.000	Y	NA
27880	27881	jhp1027	jhp1028	zwf		TRUE	0.957	11.000	0.028	1.000	Y	NA
27881	27882	jhp1028	jhp1029		glk	TRUE	0.965	-13.000	0.117	1.000	Y	NA
27882	27883	jhp1029	jhp1030	glk		FALSE	0.228	170.000	0.061	1.000		NA
27884	27885	jhp1031	jhp1032			TRUE	0.807	140.000	0.429	0.004	Y	NA
27888	27889	jhp1035	jhp1036	porG	porD	TRUE	0.987	16.000	0.205	0.003	Y	NA
27889	27890	jhp1036	jhp1037	porD	porA	TRUE	0.996	10.000	0.625	0.003	Y	NA
27890	27891	jhp1037	jhp1038	porA	porB	TRUE	0.992	13.000	0.268	0.003	Y	NA
27891	27892	jhp1038	jhp1039	porB	purB	FALSE	0.258	108.000	0.007	1.000	N	NA
27892	27893	jhp1039	jhp1040	purB		FALSE	0.028	299.000	0.007	NA		NA
27894	27895	jhp1041	jhp1042	uvrB		FALSE	0.221	49.000	0.000	NA		NA
27895	27896	jhp1042	jhp1043			TRUE	0.675	-3.000	0.000	NA		NA
27896	27897	jhp1043	jhp1044			FALSE	0.463	144.000	0.667	NA		NA
27897	27898	jhp1044	jhp1045			FALSE	0.008	419.000	0.000	NA		NA
27898	27899	jhp1045	jhp1046		ggt	FALSE	0.029	244.000	0.000	1.000		NA
27899	27900	jhp1046	jhp1047	ggt	flgK	FALSE	0.184	188.000	0.041	1.000	N	NA
27900	27901	jhp1047	jhp1048	flgK		TRUE	0.964	2.000	0.558	NA		NA
27901	27902	jhp1048	jhp1049			FALSE	0.504	79.000	0.069	NA		NA
27902	27903	jhp1049	jhp1050			TRUE	0.963	-7.000	0.389	NA		NA
27903	27904	jhp1050	jhp1051			FALSE	0.413	143.000	0.258	1.000		NA
27904	27905	jhp1051	jhp1052		slyD	FALSE	0.020	310.000	0.000	1.000		NA
27905	27906	jhp1052	jhp1053	slyD		TRUE	0.973	-13.000	0.543	1.000		NA
27906	27907	jhp1053	jhp1054			TRUE	0.985	8.000	0.794	1.000		NA
27907	27908	jhp1054	jhp1055		tolB	TRUE	0.829	67.000	0.702	1.000	N	NA
27908	27909	jhp1055	jhp1056	tolB		TRUE	0.930	-3.000	0.064	NA		NA
27909	27910	jhp1056	jhp1057		exbD_1	TRUE	0.867	19.000	0.086	NA		NA
27910	27911	jhp1057	jhp1058	exbD_1	exbB_1	TRUE	0.961	52.000	0.944	0.037	Y	NA
27911	27912	jhp1058	jhp1059	exbB_1	atpC	TRUE	0.949	11.000	0.036	1.000	N	NA
27912	27913	jhp1059	jhp1060	atpC	atpD	TRUE	0.996	11.000	0.837	0.008	Y	NA
27913	27914	jhp1060	jhp1061	atpD	atpG	TRUE	0.981	25.000	0.724	0.008	Y	NA
27914	27915	jhp1061	jhp1062	atpG	atpA	TRUE	0.994	15.000	0.846	0.008	Y	NA
27915	27916	jhp1062	jhp1063	atpA	atpH	TRUE	0.986	23.000	0.864	0.008	Y	NA
27916	27917	jhp1063	jhp1064	atpH	atpF	TRUE	0.988	1.000	0.132	0.008	Y	NA
27917	27918	jhp1064	jhp1065	atpF	atpX	TRUE	0.990	4.000	0.110	0.008	Y	NA
27918	27919	jhp1065	jhp1066	atpX		FALSE	0.427	105.000	0.037	1.000	N	NA
27919	27920	jhp1066	jhp1067			TRUE	0.982	3.000	0.827	1.000	N	NA
27920	27921	jhp1067	jhp1068			TRUE	0.937	3.000	0.040	1.000	N	NA
27921	27922	jhp1068	jhp1069		fmt	TRUE	0.936	-3.000	0.029	1.000	N	NA
27922	27923	jhp1069	jhp1070	fmt		TRUE	0.626	24.000	0.005	1.000		NA
27923	27924	jhp1070	jhp1071			TRUE	0.685	35.000	0.041	NA		NA
1937536	27926	jhpr3	jhp1073			FALSE	0.005	737.000	0.000	NA		NA
27926	27927	jhp1073	jhp1074		rplS	FALSE	0.005	853.000	0.000	NA		NA
27927	27928	jhp1074	jhp1075	rplS	trmD	TRUE	0.955	22.000	0.567	1.000	Y	NA
27928	27929	jhp1075	jhp1076	trmD		TRUE	0.982	1.000	0.672	1.000	Y	NA
27929	27930	jhp1076	jhp1077			TRUE	0.977	10.000	0.324	1.000		NA
27930	27931	jhp1077	jhp1078		rpsP	TRUE	0.946	17.000	0.385	1.000		NA
27931	27932	jhp1078	jhp1079	rpsP	ffh	TRUE	0.747	74.000	0.361	1.000	N	NA
27932	27933	jhp1079	jhp1080	ffh	valS	TRUE	0.927	15.000	0.006	0.097	N	NA
27934	27935	jhp1081	jhp1082		murG	TRUE	0.897	12.000	0.022	NA		NA
27935	27936	jhp1082	jhp1083	murG		FALSE	0.255	109.000	0.020	NA		NA
27936	27937	jhp1083	jhp1084			TRUE	0.876	23.000	0.250	NA		NA
27937	27938	jhp1084	jhp1085		proC	TRUE	0.896	14.000	0.038	NA		NA
27938	27939	jhp1085	jhp1086	proC	fic	TRUE	0.865	27.000	0.151	1.000	N	NA
27940	27941	jhp1087	jhp1088		fldA	FALSE	0.335	55.000	0.007	NA		NA
27941	27942	jhp1088	jhp1089	fldA		TRUE	0.587	92.000	0.281	NA		NA
27943	27944	jhp1090	jhp1091	fixS	trxB_2	TRUE	0.765	26.000	0.043	NA	N	NA
27946	27947	jhp1093	jhp1094	pgi		FALSE	0.021	304.000	0.000	1.000		NA
27949	27950	jhp1096	jhp1097			TRUE	0.995	2.000	0.841	0.004	Y	NA
27950	27951	jhp1097	jhp1098			TRUE	0.983	2.000	0.773	1.000	Y	NA
27951	27952	jhp1098	jhp1099			TRUE	0.901	49.000	0.671	1.000	Y	NA
27952	27953	jhp1099	jhp1100			FALSE	0.356	122.000	0.098	NA		NA
27954	27955	jhp1101	jhp1102	gluP		FALSE	0.225	129.000	0.016	1.000		NA
27955	27956	jhp1102	jhp1103			FALSE	0.007	442.000	0.000	NA		NA
27956	27957	jhp1103	jhp1104		deoD	FALSE	0.007	463.000	0.000	NA		NA
27957	27958	jhp1104	jhp1105	deoD	deoB	TRUE	0.919	-3.000	0.016	1.000	N	NA
27958	27959	jhp1105	jhp1106	deoB		TRUE	0.953	12.000	0.062	1.000	N	NA
27959	3446277	jhp1106	jhp_t28			FALSE	0.086	106.000	0.000	NA		NA
27960	27961	jhp1107	jhp1108			TRUE	0.868	16.000	0.029	NA	N	NA
27962	27963	jhp1109	jhp1110			TRUE	0.803	26.000	0.039	1.000	N	NA
27963	27964	jhp1110	jhp1111			FALSE	0.227	170.000	0.041	1.000	N	NA
27966	27967	jhp1113	jhp1114		asd	FALSE	0.008	435.000	0.000	NA		NA
27967	27968	jhp1114	jhp1115	asd	hisS	TRUE	0.957	-13.000	0.011	0.044	N	NA
27970	27971	jhp1117	jhp1118		fusA	FALSE	0.006	543.000	0.000	NA		NA
27971	27972	jhp1118	jhp1119	fusA	rpsG	TRUE	0.985	12.000	0.579	1.000	Y	NA
27972	27973	jhp1119	jhp1120	rpsG	rpsL	TRUE	0.991	16.000	0.620	0.006	Y	NA
27973	27974	jhp1120	jhp1121	rpsL	rpoB	TRUE	0.616	88.000	0.122	1.000	N	NA
27974	27975	jhp1121	jhp1122	rpoB	rplL	FALSE	0.077	222.000	0.008	1.000	N	NA
27975	27976	jhp1122	jhp1123	rplL	rplJ	TRUE	0.969	43.000	0.884	0.030	Y	NA
27976	27977	jhp1123	jhp1124	rplJ	rplA	TRUE	0.821	109.000	0.302	0.039	Y	NA
27977	27978	jhp1124	jhp1125	rplA	rplK	TRUE	0.964	45.000	0.838	0.039	Y	NA
27978	27979	jhp1125	jhp1126	rplK	nusG	TRUE	0.960	18.000	0.681	1.000	N	NA
27979	27980	jhp1126	jhp1126a	nusG	secE	TRUE	0.928	27.000	0.843	1.000		NA
27980	3446278	jhp1126a	jhp_t29	secE		FALSE	0.055	132.000	0.000	NA		NA
3446278	27981	jhp_t29	jhp1127		rpmG	FALSE	0.260	40.000	0.000	NA		NA
27981	27982	jhp1127	jhp1128	rpmG	tufA	TRUE	0.817	47.000	0.099	1.000	Y	NA
27982	3446279	jhp1128	jhp_t30	tufA		FALSE	0.061	128.000	0.000	NA		NA
3446279	3446280	jhp_t30	jhp_t31			FALSE	0.306	31.000	0.000	NA		NA
3446280	3446281	jhp_t31	jhp_t32			TRUE	0.511	17.000	0.000	NA		NA
3446281	3446282	jhp_t32	jhp_t33			FALSE	0.320	28.000	0.000	NA		NA
27984	27985	jhp1130	jhp1131		M.HpyI	FALSE	0.149	188.000	0.030	1.000		NA
27985	27986	jhp1131	jhp1132	M.HpyI		FALSE	0.011	329.000	0.000	NA		NA
27986	27987	jhp1132	jhp1133		cysE	FALSE	0.019	229.000	0.000	NA		NA
27987	3446283	jhp1133	jhp_t34	cysE		FALSE	0.012	301.000	0.000	NA		NA
3446283	3446284	jhp_t34	jhp_t35			FALSE	0.195	54.000	0.000	NA		NA
3446284	27989	jhp_t35	jhp1135		atpE	FALSE	0.150	70.000	0.000	NA		NA
27989	27990	jhp1135	jhp1136	atpE	pnp	FALSE	0.210	133.000	0.016	1.000		NA
27990	27991	jhp1136	jhp1137	pnp		TRUE	0.895	3.000	0.028	NA		NA
27991	27992	jhp1137	jhp1138		imp	TRUE	0.938	14.000	0.165	NA		NA
27992	27993	jhp1138	jhp1139	imp		TRUE	0.926	-37.000	0.116	NA		NA
27993	27994	jhp1139	jhp1140		purD	FALSE	0.477	49.000	0.013	NA		NA
27994	27995	jhp1140	jhp1141	purD		FALSE	0.069	314.000	0.000	0.096	N	NA
27995	27996	jhp1141	jhp1142			TRUE	0.891	-6.000	0.008	1.000	N	NA
27996	27997	jhp1142	jhp1143		dld	TRUE	0.590	40.000	0.008	1.000	N	NA
27998	27999	jhp1144	jhp1145		hemD	TRUE	0.926	3.000	0.026	1.000	N	NA
27999	28000	jhp1145	jhp1146	hemD		TRUE	0.660	57.000	0.051	1.000	N	NA
28002	28003	jhp1148	jhp1149		mutT	FALSE	0.196	161.000	0.019	1.000	N	NA
28003	28004	jhp1149	jhp1150	mutT	lysC	TRUE	0.946	-6.000	0.051	1.000	N	NA
28004	28005	jhp1150	jhp1151	lysC		TRUE	0.923	-3.000	0.050	NA		NA
28005	28006	jhp1151	jhp1152		holB	TRUE	0.924	-3.000	0.053	NA		NA
28006	28007	jhp1152	jhp1153	holB	folP	TRUE	0.941	-3.000	0.054	1.000		NA
28009	28010	jhp1155	jhp1156			TRUE	0.957	4.000	0.211	NA		NA
28010	28011	jhp1156	jhp1157			TRUE	0.587	79.000	0.174	NA		NA
28011	28012	jhp1157	jhp1158		carA	TRUE	0.911	0.000	0.041	NA		NA
28012	28013	jhp1158	jhp1159	carA		FALSE	0.335	169.000	0.008	0.007		NA
28014	28015	jhp1160	jhp1161			FALSE	0.063	177.000	0.005	NA		NA
28015	28016	jhp1161	jhp1162		alaS	TRUE	0.871	2.000	0.015	NA	N	NA
28018	28019	jhp1164	jhp1165	babB	rpsR	FALSE	0.014	277.000	0.000	NA		NA
28019	28020	jhp1165	jhp1166	rpsR	ssb	TRUE	0.831	23.000	0.034	1.000	N	NA
28020	28021	jhp1166	jhp1167	ssb	rpsF	TRUE	0.915	15.000	0.033	1.000	N	NA
28021	28022	jhp1167	jhp1168	rpsF		FALSE	0.275	129.000	0.020	1.000	N	NA
28022	28023	jhp1168	jhp1169		vacB	TRUE	0.924	-10.000	0.024	1.000	N	NA
28023	28024	jhp1169	jhp1170	vacB	aroE	TRUE	0.922	0.000	0.020	1.000	N	NA
28024	28025	jhp1170	jhp1171	aroE		TRUE	0.725	8.000	0.000	NA		NA
28025	28026	jhp1171	jhp1172			TRUE	0.729	9.000	0.000	NA		NA
28026	28027	jhp1172	jhp1173			TRUE	0.990	-3.000	0.500	0.026		NA
28027	28028	jhp1173	jhp1174		trpS	TRUE	0.867	1.000	0.007	1.000	N	NA
28028	28029	jhp1174	jhp1175	trpS		FALSE	0.443	72.000	0.016	1.000		NA
28030	28031	jhp1176	jhp1177	secG	frr	TRUE	0.883	0.000	0.008	1.000	N	NA
28031	28032	jhp1177	jhp1178	frr	pyrE	TRUE	0.937	4.000	0.026	1.000	N	NA
28032	28033	jhp1178	jhp1179	pyrE		TRUE	0.927	-10.000	0.071	NA		NA
28033	28034	jhp1179	jhp1180			TRUE	0.933	-3.000	0.070	NA		NA
28034	28035	jhp1180	jhp1181		nuoA	TRUE	0.527	93.000	0.061	1.000	N	NA
28035	28036	jhp1181	jhp1182	nuoA	nuoB	TRUE	0.994	0.000	0.571	0.004	Y	NA
28036	28037	jhp1182	jhp1183	nuoB	nuoC	TRUE	0.995	0.000	0.703	0.004	Y	NA
28037	28038	jhp1183	jhp1184	nuoC	nuoD	TRUE	0.993	2.000	0.650	0.011	Y	NA
28038	28039	jhp1184	jhp1185	nuoD	nuoE	TRUE	0.992	-3.000	0.650	0.011		NA
28039	28040	jhp1185	jhp1186	nuoE	nuoF	TRUE	0.980	3.000	0.071	0.011		NA
28040	28041	jhp1186	jhp1187	nuoF	nuoG	TRUE	0.982	-3.000	0.074	0.011		NA
28041	28042	jhp1187	jhp1188	nuoG	nuoH	TRUE	0.987	-3.000	0.065	0.011	Y	NA
28042	28043	jhp1188	jhp1189	nuoH	nuoI	TRUE	0.995	10.000	0.500	0.011	Y	NA
28043	28044	jhp1189	jhp1190	nuoI	nuoJ	TRUE	0.993	-7.000	0.442	0.011	Y	NA
28044	28045	jhp1190	jhp1191	nuoJ	nuoK	TRUE	0.989	-3.000	0.064	0.004	Y	NA
28045	28046	jhp1191	jhp1192	nuoK	nuoL	TRUE	0.985	3.000	0.056	0.011	Y	NA
28046	28047	jhp1192	jhp1193	nuoL	nuoM	TRUE	0.990	4.000	0.056	0.002	Y	NA
28047	28048	jhp1193	jhp1194	nuoM	nuoN	TRUE	0.993	-13.000	0.389	0.002	Y	NA
28048	28049	jhp1194	jhp1195	nuoN	pflA	TRUE	0.975	-10.000	0.586	1.000		NA
28049	28050	jhp1195	jhp1196	pflA		TRUE	0.912	2.000	0.030	1.000		NA
28050	28051	jhp1196	jhp1197			FALSE	0.064	181.000	0.007	NA		NA
28052	28053	jhp1198	jhp1199	trpA	trpB	TRUE	0.997	-3.000	0.947	0.001	Y	NA
28053	28054	jhp1199	jhp1200	trpB	trpC	TRUE	0.991	2.000	0.221	0.002	Y	NA
28054	28055	jhp1200	jhp1201	trpC	trpD	TRUE	0.977	-7.000	0.293	1.000	Y	NA
28055	28056	jhp1201	jhp1202	trpD	trpG	TRUE	0.966	-3.000	0.083	1.000	Y	NA
28056	28057	jhp1202	jhp1203	trpG	trpE	TRUE	0.996	-3.000	0.703	0.001	Y	NA
28057	28058	jhp1203	jhp1204	trpE		FALSE	0.093	229.000	0.016	1.000	N	NA
28058	28059	jhp1204	jhp1205			TRUE	0.610	68.000	0.068	1.000		NA
28062	28063	jhp1208	jhp1209			TRUE	0.922	24.000	0.800	NA		NA
28063	28064	jhp1209	jhp1210		pnuC	FALSE	0.219	186.000	0.182	NA		NA
28064	28065	jhp1210	jhp1211	pnuC		TRUE	0.939	-12.000	0.021	1.000	Y	NA
28066	28067	jhp1212	jhp1213	rplQ	rpoA	TRUE	0.983	0.000	0.873	1.000	N	NA
28067	28068	jhp1213	jhp1214	rpoA	rpsD	TRUE	0.980	12.000	0.549	1.000	N	NA
28068	28069	jhp1214	jhp1215	rpsD	rpsK	TRUE	0.994	10.000	0.509	0.038	Y	NA
28069	28070	jhp1215	jhp1216	rpsK	rpsM	TRUE	0.983	23.000	0.810	0.030	Y	NA
28070	28071	jhp1216	jhp1217	rpsM	rpmJ	TRUE	0.986	4.000	0.194	0.030		NA
28071	28072	jhp1217	jhp1218	rpmJ	infA	TRUE	0.604	79.000	0.104	1.000		NA
28072	28073	jhp1218	jhp1219	infA	map	TRUE	0.957	0.000	0.051	1.000	Y	NA
28073	28074	jhp1219	jhp1220	map	secY	TRUE	0.928	0.000	0.026	1.000	N	NA
28074	28075	jhp1220	jhp1221	secY	rplO	TRUE	0.914	35.000	0.730	1.000	N	NA
28075	28076	jhp1221	jhp1222	rplO	rpsE	TRUE	0.975	18.000	0.148	0.038	Y	NA
28076	28077	jhp1222	jhp1223	rpsE	rplR	TRUE	0.994	-3.000	0.814	0.038	Y	NA
28077	28078	jhp1223	jhp1224	rplR	rplF	TRUE	0.993	14.000	0.815	0.030	Y	NA
28078	28079	jhp1224	jhp1225	rplF	rpsH	TRUE	0.995	12.000	0.808	0.030	Y	NA
28079	28080	jhp1225	jhp1226	rpsH	rpsN	TRUE	0.995	10.000	0.473	0.030	Y	NA
28080	28081	jhp1226	jhp1227	rpsN	rplE	TRUE	0.995	10.000	0.496	0.030	Y	NA
28081	28082	jhp1227	jhp1228	rplE	rplX	TRUE	0.993	14.000	0.758	0.030	Y	NA
28082	28083	jhp1228	jhp1229	rplX	rplN	TRUE	0.994	0.000	0.810	0.038	Y	NA
28083	28084	jhp1229	jhp1230	rplN	rpsQ	TRUE	0.994	3.000	0.791	0.038	Y	NA
28084	28085	jhp1230	jhp1231	rpsQ	rpmC	TRUE	0.993	14.000	0.828	0.030	Y	NA
28085	28086	jhp1231	jhp1232	rpmC	rplP	TRUE	0.994	-13.000	0.802	0.030	Y	NA
28086	28087	jhp1232	jhp1233	rplP	rpsC	TRUE	0.994	3.000	0.828	0.038	Y	NA
28087	28088	jhp1233	jhp1234	rpsC	rplV	TRUE	0.994	4.000	0.719	0.038	Y	NA
28088	28089	jhp1234	jhp1235	rplV	rpsS	TRUE	0.996	10.000	0.769	0.038	Y	NA
28089	28090	jhp1235	jhp1236	rpsS	rplB	TRUE	0.995	12.000	0.820	0.038	Y	NA
28090	28091	jhp1236	jhp1237	rplB	rplW	TRUE	0.992	16.000	0.849	0.023	Y	NA
28091	28092	jhp1237	jhp1238	rplW	rplD	TRUE	0.994	4.000	0.513	0.030	Y	NA
28092	28093	jhp1238	jhp1239	rplD	rplC	TRUE	0.960	35.000	0.361	0.030	Y	NA
28093	28094	jhp1239	jhp1240	rplC	rpsJ	TRUE	0.960	37.000	0.467	0.038	Y	NA
28095	28096	jhp1241	jhp1242			FALSE	0.015	265.000	0.000	NA		NA
28097	28098	jhp1243	jhp1244	rnhB		TRUE	0.714	16.000	0.007	NA		NA
28098	28099	jhp1244	jhp1245		fumC	FALSE	0.292	81.000	0.010	NA		NA
28100	28101	jhp1246	jhp1247			TRUE	0.976	5.000	0.625	NA		NA
28101	28102	jhp1247	jhp1248		czcB_2	TRUE	0.980	-3.000	0.562	NA	Y	NA
28102	28103	jhp1248	jhp1249	czcB_2	czcA_2	TRUE	0.968	1.000	0.526	NA	N	NA
28104	28105	jhp1250	jhp1251			TRUE	0.985	-6.000	0.915	NA	Y	NA
28105	28106	jhp1251	jhp1252		dnaJ_2	TRUE	0.927	11.000	0.014	1.000	N	NA
28110	28111	jhp1256	jhp1257			TRUE	0.900	-16.000	0.014	1.000	N	NA
28112	28113	jhp1258	jhp1259	exbB_2	exbD_2	TRUE	0.995	-3.000	0.815	0.036	Y	NA
28113	28114	jhp1259	jhp1260	exbD_2	tonB_2	TRUE	0.985	-34.000	0.407	0.070	N	NA
28114	28115	jhp1260	jhp1261	tonB_2		FALSE	0.257	185.000	0.273	NA		NA
28116	28117	jhp1262	jhp1263		corA	TRUE	0.977	7.000	0.134	1.000	Y	NA
28117	28118	jhp1263	jhp1264	corA	pgk	TRUE	0.849	16.000	0.011	1.000	N	NA
28118	28119	jhp1264	jhp1265	pgk	gap_2	TRUE	0.976	15.000	0.020	0.005	Y	NA
28119	28120	jhp1265	jhp1266	gap_2	ung	TRUE	0.584	89.000	0.088	1.000	N	NA
28120	28121	jhp1266	jhp1267	ung	plsC	TRUE	0.958	-3.000	0.088	1.000	N	NA
28121	28122	jhp1267	jhp1268	plsC		TRUE	0.974	-13.000	0.846	NA		NA
28122	28123	jhp1268	jhp1269		prc	TRUE	0.903	7.000	0.017	NA		NA
28123	28124	jhp1269	jhp1270	prc		FALSE	0.022	210.000	0.000	NA		NA
28124	28125	jhp1270	jhp1271			TRUE	0.912	0.000	0.042	NA		NA
28125	28126	jhp1271	jhp1272			FALSE	0.315	129.000	0.000	0.013		NA
28126	28127	jhp1272	jhp1273		nadC	FALSE	0.013	3309.000	0.002	1.000		NA
28127	28128	jhp1273	jhp1274	nadC	nadA	TRUE	0.992	0.000	0.198	0.003	Y	NA
28128	28129	jhp1274	jhp1275	nadA	psd	TRUE	0.916	-10.000	0.018	1.000	N	NA
28129	28130	jhp1275	jhp1276	psd		TRUE	0.948	-6.000	0.079	1.000		NA
28130	28131	jhp1276	jhp1277			TRUE	0.972	13.000	0.727	NA		NA
28131	28132	jhp1277	jhp1278		ubiA	TRUE	0.886	-64.000	0.038	NA		NA
28132	28133	jhp1278	jhp1279	ubiA	comEC	TRUE	0.534	29.000	0.009	NA		NA
28133	28134	jhp1279	jhp1280	comEC	dnaB	FALSE	0.373	81.000	0.023	NA		NA
28134	28135	jhp1280	jhp1281	dnaB		TRUE	0.889	11.000	0.010	NA	N	NA
28135	28136	jhp1281	jhp1282			TRUE	0.863	3.000	0.010	NA	N	NA
28136	28137	jhp1282	jhp1283			TRUE	0.656	134.000	0.769	1.000	Y	NA
28138	28139	jhp1284	jhp1285			TRUE	0.978	10.000	0.037	0.056		NA
28140	28141	jhp1286	jhp1287		mreB	TRUE	0.982	4.000	0.689	1.000	N	NA
28141	28142	jhp1287	jhp1288	mreB	clpX	TRUE	0.809	53.000	0.034	0.094	N	NA
28142	28143	jhp1288	jhp1289	clpX	lpxA	TRUE	0.919	2.000	0.027	1.000	N	NA
28143	28144	jhp1289	jhp1290	lpxA	fabZ	TRUE	0.968	3.000	0.264	1.000	N	NA
28144	28145	jhp1290	jhp1291	fabZ		FALSE	0.103	182.000	0.017	NA		NA
28146	28147	jhp1292	jhp1293		lon	TRUE	0.730	43.000	0.062	1.000		NA
28147	28148	jhp1293	jhp1294	lon	tyrA	TRUE	0.928	9.000	0.011	1.000	N	NA
28149	28150	jhp1295	jhp1296		mod_1	FALSE	0.163	261.000	0.130	1.000	N	NA
28150	28151	jhp1296	jhp1297	mod_1	res_1	TRUE	0.983	-6.000	0.200	0.056		NA
28152	28153	jhp1298	jhp1299	bioB	rbn	TRUE	0.903	0.000	0.017	1.000		NA
1937537	1937538	jhpr4	jhpr5			FALSE	0.018	231.000	0.000	NA		NA
28154	28155	jhp1300	jhp1301			TRUE	0.601	-55.000	0.000	NA		NA
28155	28156	jhp1301	jhp1302			FALSE	0.274	182.000	0.286	NA		NA
28156	28157	jhp1302	jhp1303			TRUE	0.850	46.000	0.714	NA		NA
28157	28158	jhp1303	jhp1304			TRUE	0.749	68.000	0.571	NA		NA
28158	28159	jhp1304	jhp1305			FALSE	0.028	187.000	0.000	NA		NA
28159	28160	jhp1305	jhp1306			FALSE	0.052	134.000	0.000	NA		NA
28160	28161	jhp1306	jhp1307			FALSE	0.289	35.000	0.000	NA		NA
28163	28164	jhp1309	jhp1310		miaA	FALSE	0.304	71.000	0.009	NA		NA
28164	28165	jhp1310	jhp1311	miaA		TRUE	0.915	1.000	0.021	1.000	N	NA
28165	28166	jhp1311	jhp1312			TRUE	0.638	17.000	0.000	1.000		NA
28167	28168	jhp1313	jhp1314	murB	fliQ	TRUE	0.956	4.000	0.066	1.000	N	NA
28168	28169	jhp1314	jhp1315	fliQ	fliI	TRUE	0.976	11.000	0.145	1.000	Y	NA
28169	28170	jhp1315	jhp1316	fliI	virB11_2	TRUE	0.986	1.000	0.216	0.093	Y	NA
28170	28171	jhp1316	jhp1317	virB11_2	ileS	TRUE	0.971	17.000	0.242	0.093	N	NA
28171	28172	jhp1317	jhp1318	ileS		TRUE	0.854	20.000	0.013	1.000	Y	NA
28174	28175	jhp1320	jhp1321			FALSE	0.014	272.000	0.000	NA		NA
28176	28177	jhp1322	jhp1323	ksgA		TRUE	0.615	51.000	0.028	1.000		NA
28177	28178	jhp1323	jhp1324			TRUE	0.957	-16.000	0.222	1.000		NA
28178	28179	jhp1324	jhp1325			TRUE	0.882	-3.000	0.009	1.000		NA
28180	28181	jhp1326	jhp1327		purU	FALSE	0.333	109.000	0.024	1.000		NA
28181	28182	jhp1327	jhp1328	purU	sppA	TRUE	0.929	3.000	0.028	1.000	N	NA
28183	28184	jhp1329	jhp1330			FALSE	0.023	207.000	0.000	NA		NA
28184	28185	jhp1330	jhp1331			FALSE	0.395	136.000	0.308	NA		NA
28185	28186	jhp1331	jhp1332			TRUE	0.966	10.000	0.222	NA		NA
1937539	28187	jhpr6	jhp1333			FALSE	0.006	496.000	0.000	NA		NA
28188	28189	jhp1334	jhp1335	ppiA	csrA	TRUE	0.898	18.000	0.060	1.000	N	NA
28189	28190	jhp1335	jhp1336	csrA		TRUE	0.942	-3.000	0.036	1.000	N	NA
28190	28191	jhp1336	jhp1337			TRUE	0.920	-22.000	0.028	1.000	N	NA
28191	28192	jhp1337	jhp1338		exbB_3	TRUE	0.908	3.000	0.014	1.000	N	NA
28192	28193	jhp1338	jhp1339	exbB_3	exbD_3	TRUE	0.993	11.000	0.452	0.035	Y	NA
28193	28194	jhp1339	jhp1340	exbD_3	rpmH	FALSE	0.328	72.000	0.005	1.000		NA
28194	28195	jhp1340	jhp1341	rpmH	rnpA	TRUE	0.974	-40.000	0.787	1.000		NA
28195	28196	jhp1341	jhp1342	rnpA		TRUE	0.966	-13.000	0.540	NA		NA
28196	28197	jhp1342	jhp1343			TRUE	0.973	6.000	0.461	NA		NA
28197	28198	jhp1343	jhp1344			TRUE	0.912	14.000	0.061	NA		NA
28198	28199	jhp1344	jhp1345		thdF	TRUE	0.897	-40.000	0.049	NA		NA
28199	28200	jhp1345	jhp1346	thdF		FALSE	0.024	202.000	0.000	NA		NA
28201	28202	jhp1347	jhp1348			TRUE	0.984	10.000	0.889	NA		NA
28202	28203	jhp1348	jhp1349		lpp20	TRUE	0.984	8.000	1.000	NA		NA
28203	28204	jhp1349	jhp1350	lpp20		TRUE	0.790	24.000	0.063	NA		NA
28204	28205	jhp1350	jhp1351			FALSE	0.010	359.000	0.000	NA		NA
28205	28206	jhp1351	jhp1352			TRUE	0.767	56.000	0.206	1.000	N	NA
28206	28207	jhp1352	jhp1353		dnaE	TRUE	0.886	-18.000	0.010	1.000	N	NA
28209	28210	jhp1355	jhp1356			FALSE	0.474	19.000	0.000	NA		NA
28210	28211	jhp1356	jhp1357			TRUE	0.940	3.000	0.120	NA		NA
28211	28212	jhp1357	jhp1358			TRUE	0.982	-15.000	0.912	NA	Y	NA
28212	28213	jhp1358	jhp1359			TRUE	0.984	0.000	0.912	NA	Y	NA
28215	28216	jhp1361	jhp1362	ilvE		TRUE	0.626	51.000	0.060	NA		NA
28216	28217	jhp1362	jhp1363		polA	FALSE	0.159	114.000	0.008	NA		NA
28217	28218	jhp1363	jhp1364	polA		TRUE	0.622	64.000	0.005	0.055		NA
28218	28219	jhp1364	jhp1365			TRUE	0.984	-3.000	0.235	0.055		NA
28219	28220	jhp1365	jhp1366			TRUE	0.763	32.000	0.091	NA		NA
28220	28221	jhp1366	jhp1367		tmk	TRUE	0.856	-12.000	0.014	NA		NA
28221	28222	jhp1367	jhp1368	tmk	kdtB	TRUE	0.944	4.000	0.034	1.000	N	NA
28222	28223	jhp1368	jhp1369	kdtB	ubiD	TRUE	0.950	0.000	0.032	1.000	Y	NA
28223	28224	jhp1369	jhp1370	ubiD		TRUE	0.968	10.000	0.191	NA	N	NA
28224	28225	jhp1370	jhp1371		rep	TRUE	0.926	-3.000	0.036	NA	N	NA
28225	28226	jhp1371	jhp1372	rep		TRUE	0.902	0.000	0.017	1.000		NA
28226	28227	jhp1372	jhp1373		serS	TRUE	0.929	10.000	0.016	1.000		NA
28227	28228	jhp1373	jhp1374	serS		TRUE	0.870	1.000	0.010	1.000		NA
28228	28229	jhp1374	jhp1375			TRUE	0.934	4.000	0.032	1.000		NA
28229	28230	jhp1375	jhp1376		ubiE	TRUE	0.915	10.000	0.008	1.000	N	NA
28230	28231	jhp1376	jhp1377	ubiE		TRUE	0.874	9.000	0.009	NA		NA
28231	28232	jhp1377	jhp1378			TRUE	0.920	10.000	0.024	NA		NA
28232	28233	jhp1378	jhp1379			TRUE	0.882	-13.000	0.024	NA		NA
28233	28234	jhp1379	jhp1380			TRUE	0.975	-3.000	0.743	NA		NA
28234	28235	jhp1380	jhp1381			TRUE	0.975	12.000	0.729	NA		NA
28235	28236	jhp1381	jhp1382			TRUE	0.978	12.000	0.464	1.000	N	NA
28236	28237	jhp1382	jhp1383			TRUE	0.950	-3.000	0.082	1.000		NA
28237	28238	jhp1383	jhp1384			FALSE	0.371	130.000	0.099	1.000		NA
28239	28240	jhp1385	jhp1386			TRUE	0.951	13.000	0.107	1.000		NA
28240	28241	jhp1386	jhp1387		murE	TRUE	0.946	4.000	0.057	1.000		NA
28241	28242	jhp1387	jhp1388	murE	tal	TRUE	0.964	3.000	0.016	0.042	N	NA
28242	28243	jhp1388	jhp1389	tal	rplY	TRUE	0.568	55.000	0.017	1.000	N	NA
28243	28244	jhp1389	jhp1390	rplY	pth	TRUE	0.994	10.000	0.496	0.043	Y	NA
28244	28245	jhp1390	jhp1391	pth		TRUE	0.977	10.000	0.031	0.043		NA
28245	28246	jhp1391	jhp1392			FALSE	0.177	121.000	0.005	1.000		NA
28246	28247	jhp1392	jhp1393			FALSE	0.038	167.000	0.000	NA		NA
28250	28251	jhp1396	jhp1397	fixI		TRUE	0.938	10.000	0.023	1.000		NA
28251	28252	jhp1397	jhp1398		ribD	TRUE	0.827	-18.000	0.005	1.000		NA
28252	28253	jhp1398	jhp1399	ribD	gltS	TRUE	0.826	4.000	0.000	1.000	N	NA
28256	28257	jhp1402	jhp1403		folB	TRUE	0.953	-3.000	0.096	1.000		NA
28257	28258	jhp1403	jhp1404	folB		TRUE	0.907	-16.000	0.049	NA		NA
28258	28259	jhp1404	jhp1405		frpB_3	FALSE	0.465	169.000	1.000	NA		NA
28259	28260	jhp1405	jhp1406	frpB_3	selA	FALSE	0.032	226.000	0.000	1.000		NA
28260	28261	jhp1406	jhp1407	selA	nusA	FALSE	0.297	96.000	0.007	1.000	N	NA
28261	28262	jhp1407	jhp1408	nusA		FALSE	0.292	57.000	0.003	NA		NA
28263	28264	jhp1409	jhp1410		res_2	TRUE	0.813	122.000	0.500	0.054	Y	NA
28264	28265	jhp1410	jhp1411	res_2	mod_2	TRUE	0.988	3.000	0.429	0.054	N	NA
28265	28266	jhp1411	jhp1412	mod_2	recG	TRUE	0.893	52.000	0.087	0.054	Y	NA
28267	28268	jhp1413	jhp1414			TRUE	0.981	4.000	1.000	NA		NA
28270	28271	jhp1416	jhp1417		dnaA	FALSE	0.020	221.000	0.000	NA		NA
28272	28273	jhp1418	jhp1419			TRUE	0.625	45.000	0.039	NA		NA
28273	28274	jhp1419	jhp1420		glmS	TRUE	0.941	1.000	0.167	NA		NA
28274	28275	jhp1420	jhp1421	glmS		TRUE	0.777	24.000	0.018	1.000	N	NA
28276	28277	jhp1422	jhp1423	hsdS_3a	hsdM_3	TRUE	0.981	-3.000	0.037	0.054	Y	NA
28278	28279	jhp1424	jhp1425	hsdR_3		TRUE	0.963	0.000	0.411	NA		NA
28280	28281	jhp1426	jhp1427	fecA_3	rocF	FALSE	0.013	530.000	0.000	1.000	N	NA
28282	28283	jhp1428	jhp1429	ald		FALSE	0.028	248.000	0.000	1.000		NA
28283	28284	jhp1429	jhp1430			FALSE	0.054	133.000	0.000	NA		NA
28284	28285	jhp1430	jhp1431			FALSE	0.298	33.000	0.000	NA		NA
28287	28288	jhp1433	jhp1434		recN	TRUE	0.783	38.000	0.066	1.000	N	NA
28288	28289	jhp1434	jhp1435	recN		TRUE	0.905	3.000	0.035	NA		NA
28289	28290	jhp1435	jhp1436			TRUE	0.669	19.000	0.008	NA		NA
28290	28291	jhp1436	jhp1437			FALSE	0.042	154.000	0.000	NA		NA
28292	28293	jhp1438	jhp1439		rpe	TRUE	0.960	-130.000	0.279	1.000	N	NA
28294	28295	jhp1440	jhp1441	fbp		TRUE	0.974	0.000	0.778	NA		NA
28295	28296	jhp1441	jhp1442			FALSE	0.159	67.000	0.000	NA		NA
28296	28297	jhp1442	jhp1443			TRUE	0.641	87.000	0.231	1.000		NA
28298	28299	jhp1444	jhp1445	tfs	rpsB	TRUE	0.985	0.000	0.748	1.000	Y	NA
28300	28301	jhp1446	jhp1447	pcrA	nhaA	TRUE	0.799	24.000	0.026	1.000	N	NA
28301	28302	jhp1447	jhp1448	nhaA		FALSE	0.484	48.000	0.009	NA	N	NA
28302	28303	jhp1448	jhp1449		secD	TRUE	0.946	1.000	0.068	NA	Y	NA
28303	28304	jhp1449	jhp1450	secD	secF	TRUE	0.996	9.000	0.436	0.001	Y	NA
28304	28305	jhp1450	jhp1451	secF		TRUE	0.980	10.000	0.667	NA		NA
28305	28306	jhp1451	jhp1452		leuS	TRUE	0.916	10.000	0.021	NA		NA
28306	28307	jhp1452	jhp1453	leuS		TRUE	0.908	-3.000	0.031	NA		NA
28307	28308	jhp1453	jhp1454		folC	TRUE	0.931	-10.000	0.084	NA		NA
28308	28309	jhp1454	jhp1455	folC		TRUE	0.951	0.000	0.071	1.000	N	NA
28309	28310	jhp1455	jhp1456			TRUE	0.997	10.000	0.909	0.007	Y	NA
28310	28311	jhp1456	jhp1457			TRUE	0.960	-81.000	0.244	NA	Y	NA
28311	28312	jhp1457	jhp1458		mfd	TRUE	0.915	4.000	0.023	NA	N	NA
28312	28313	jhp1458	jhp1459	mfd	petA	FALSE	0.219	125.000	0.008	1.000	N	NA
28313	28314	jhp1459	jhp1460	petA	petB	TRUE	0.992	11.000	0.093	0.002	Y	NA
28314	28315	jhp1460	jhp1461	petB	petC	TRUE	0.991	-3.000	0.103	0.002	Y	NA
28316	28317	jhp1462	jhp1463			TRUE	0.952	0.000	0.222	NA		NA
28317	28318	jhp1463	jhp1464			FALSE	0.011	330.000	0.000	NA		NA
28318	28319	jhp1464	jhp1465		fliE	FALSE	0.430	156.000	0.303	1.000	N	NA
28319	28320	jhp1465	jhp1466	fliE	flgC	TRUE	0.804	128.000	0.271	0.006	Y	NA
28320	28321	jhp1466	jhp1467	flgC	flgB	TRUE	0.995	13.000	0.804	0.006	Y	NA
28323	28324	jhp1469	jhp1470			TRUE	0.670	208.000	0.375	0.001	Y	NA
28325	28326	jhp1471	jhp1472	tsaA		FALSE	0.166	146.000	0.016	NA	N	NA
28327	28328	jhp1473	jhp1474			TRUE	0.882	-19.000	0.027	NA		NA
28328	28329	jhp1474	jhp1475			TRUE	0.881	10.000	0.010	NA		NA
28329	28330	jhp1475	jhp1476			TRUE	0.917	-3.000	0.041	NA		NA
28330	28331	jhp1476	jhp1477			TRUE	0.909	0.000	0.038	NA		NA
28331	28332	jhp1477	jhp1478			TRUE	0.960	-25.000	0.471	NA		NA
28332	28333	jhp1478	jhp1479			TRUE	0.918	-3.000	0.042	NA		NA
28333	28334	jhp1479	jhp1480		dniR	TRUE	0.939	0.000	0.115	NA		NA
28334	28335	jhp1480	jhp1481	dniR		FALSE	0.384	84.000	0.028	NA		NA
28336	28337	jhp1482	jhp1483	ribC	flhB_2	TRUE	0.858	1.000	0.009	1.000		NA
28337	28338	jhp1483	jhp1484	flhB_2		TRUE	0.883	19.000	0.066	1.000		NA
28338	28339	jhp1484	jhp1485			TRUE	0.972	2.000	0.274	1.000	Y	NA
28340	28341	jhp1486	jhp1487			TRUE	0.980	10.000	0.700	NA		NA
28341	28342	jhp1487	jhp1488		wecA	TRUE	0.977	0.000	0.538	1.000	N	NA
28343	28344	jhp1489	jhp1490	pdxJ	pdxA	TRUE	0.986	2.000	0.048	0.001	Y	NA
28344	28345	jhp1490	jhp1491	pdxA	ydiE	FALSE	0.037	350.000	0.007	1.000	N	NA
28345	28346	jhp1491	jhp1492	ydiE	flgG_2	FALSE	0.016	878.000	0.004	1.000	N	NA
28347	28348	jhp1493	jhp1494			FALSE	0.005	831.000	0.000	NA		NA
28348	28349	jhp1494	jhp1495			FALSE	0.009	366.000	0.000	NA		NA
28349	26859	jhp1495	jhp0001		nusB	FALSE	0.054	296.000	0.027	NA		NA