MicrobesOnline Operon Predictions for Prochlorococcus marinus str. NATL2A

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 1202602 1202603 PMN2A_1328 PMN2A_1329 dnaN   FALSE 0.765 3.000 0.022 NA   NA
 1202603 1202604 PMN2A_1329 PMN2A_1330     TRUE 0.786 4.000 0.039 NA   NA
 1202604 1202605 PMN2A_1330 PMN2A_1331   purF TRUE 0.797 62.000 0.019 1.000 Y NA
 1202606 1202607 PMN2A_1332 PMN2A_1333     FALSE 0.249 84.000 0.053 1.000   NA
 1202607 1202608 PMN2A_1333 PMN2A_1334     TRUE 0.843 6.000 0.034 1.000   NA
 1202609 1202610 PMN2A_1335 PMN2A_1336   nusB TRUE 0.831 18.000 0.029 NA   NA
 1202610 1202611 PMN2A_1336 PMN2A_1337 nusB ftsY FALSE 0.746 -3.000 0.013 1.000 N NA
 1202611 1202612 PMN2A_1337 PMN2A_1338 ftsY rsbU FALSE 0.446 59.000 0.013 1.000 N NA
 1202612 1202613 PMN2A_1338 PMN2A_1339 rsbU argH FALSE 0.694 49.000 0.021 1.000 N NA
 1202613 1202614 PMN2A_1339 PMN2A_1340 argH   FALSE 0.090 127.000 0.019 1.000   NA
 1202616 1202617 PMN2A_1342 PMN2A_1343   grpE FALSE 0.475 95.000 0.021 1.000 Y NA
 1202617 1202618 PMN2A_1343 PMN2A_1344 grpE dnaJ TRUE 0.978 45.000 0.168 0.017 Y NA
 1202618 1203468 PMN2A_1344 PMN2A_1345 dnaJ   TRUE 0.847 3.000 0.067 1.000   NA
 1203468 1202619 PMN2A_1345 PMN2A_1346     TRUE 0.812 -7.000 0.058 1.000   NA
 1202620 1202621 PMN2A_1347 PMN2A_1348   murB TRUE 0.784 38.000 0.030 NA   NA
 1202621 1202622 PMN2A_1348 PMN2A_1349 murB murC TRUE 0.984 4.000 0.136 0.007 Y NA
 1202624 1202625 PMN2A_1351 PMN2A_1352 thiL   TRUE 0.847 13.000 0.031 1.000 N NA
 1202626 1202627 PMN2A_1353 PMN2A_1354 efp accB TRUE 0.844 -3.000 0.120 1.000 N NA
 1202628 1202629 PMN2A_1355 PMN2A_1356 pdxA   FALSE 0.031 186.000 0.020 1.000 N NA
 1202630 1202631 PMN2A_1358 PMN2A_1359     FALSE 0.029 152.000 0.000 NA   NA
 1202633 1202634 PMN2A_1362 PMN2A_1363 cbiD   FALSE 0.359 67.000 0.023 1.000 N NA
 1202637 1362573 PMN2A_1366     pseudo FALSE 0.009 286.000 0.000 NA   NA
 1202638 1202639 PMN2A_1367 PMN2A_1368     FALSE 0.008 354.000 0.000 NA   NA
 1202640 1202641 PMN2A_1369 PMN2A_1370     FALSE 0.006 472.000 0.000 NA   NA
 1202642 1202643 PMN2A_1371 PMN2A_1372     TRUE 0.961 17.000 0.650 NA   NA
 1202643 1202644 PMN2A_1372 PMN2A_1373     TRUE 0.828 23.000 0.047 NA   NA
 1202645 1202646 PMN2A_1374 PMN2A_1375     TRUE 0.950 51.000 0.458 0.039   NA
 1202646 1202647 PMN2A_1375 PMN2A_1376     TRUE 0.990 3.000 0.457 0.006 Y NA
 1202655 1202656 PMN2A_1384 PMN2A_1385     FALSE 0.380 81.000 0.250 NA   NA
 1202656 1202657 PMN2A_1385 PMN2A_1386     FALSE 0.018 183.000 0.000 NA   NA
 1203472 1202658   PMN2A_1387     FALSE 0.092 92.000 0.000 NA   NA
 1202658 1202659 PMN2A_1387 PMN2A_1388     FALSE 0.058 114.000 0.000 NA   NA
 1203473 1202661   PMN2A_1390   cynS FALSE 0.012 226.000 0.000 NA   NA
 1202661 1202662 PMN2A_1390 PMN2A_1391 cynS   FALSE 0.006 514.000 0.000 NA   NA
 1202662 1202663 PMN2A_1391 PMN2A_1392     FALSE 0.006 445.000 0.000 NA   NA
 1202663 1294574 PMN2A_1392 PMN2A_1393     FALSE 0.037 138.000 0.000 NA   NA
 1294574 1203476 PMN2A_1393       FALSE 0.013 221.000 0.000 NA   NA
 1203476 1203477         FALSE 0.006 424.000 0.000 NA   NA
 1203478 1203479         FALSE 0.019 177.000 0.000 NA   NA
 1203479 1202664   PMN2A_1394     FALSE 0.011 255.000 0.000 NA   NA
 1202664 1202665 PMN2A_1394 PMN2A_1395     FALSE 0.005 617.000 0.000 NA   NA
 1203481 1202666   PMN2A_1397     FALSE 0.029 152.000 0.000 NA   NA
 1202667 1202668 PMN2A_1398 PMN2A_1399     FALSE 0.654 0.000 0.000 NA   NA
 1202668 1202669 PMN2A_1399 PMN2A_1400     FALSE 0.029 152.000 0.000 NA   NA
 1202670 1202671 PMN2A_1401 PMN2A_1402     FALSE 0.011 252.000 0.000 NA   NA
 1202672 1202673 PMN2A_1403 PMN2A_1404     FALSE 0.008 304.000 0.000 NA   NA
 1203482 1203483 PMN2A_1406 PMN2A_1407     FALSE 0.028 153.000 0.000 NA   NA
 1203483 1202675 PMN2A_1407 PMN2A_1408     FALSE 0.005 616.000 0.000 NA   NA
 1202677 1203485 PMN2A_1411 PMN2A_1412     FALSE 0.017 191.000 0.000 NA   NA
 1202678 1203486 PMN2A_1413       FALSE 0.022 166.000 0.000 NA   NA
 1203486 1202679   PMN2A_1414     FALSE 0.022 166.000 0.000 NA   NA
 1203487 1203488         FALSE 0.023 165.000 0.000 NA   NA
 1203488 1309412   PMN2A_R0028   ssrA FALSE 0.626 -108.000 0.000 NA   NA
 1202681 1202682 PMN2A_1416 PMN2A_1417     TRUE 0.938 0.000 0.522 NA   NA
 1202683 1202684 PMN2A_1418 PMN2A_1419     FALSE 0.326 94.000 0.350 NA   NA
 1202684 1202685 PMN2A_1419 PMN2A_1420   smc FALSE 0.118 131.000 0.150 NA   NA
 1202685 1202686 PMN2A_1420 PMN2A_1421 smc   FALSE 0.618 59.000 0.177 NA   NA
 1202687 1309242 PMN2A_1422 PMN2A_R0029   tRNA-Leu FALSE 0.718 28.000 0.000 NA   NA
 1202690 1202691 PMN2A_1425 PMN2A_1426     FALSE 0.523 84.000 0.556 NA   NA
 1202692 1202693 PMN2A_1427 PMN2A_1428 hli2   TRUE 0.794 10.000 0.000 1.000   NA
 1202693 1203490 PMN2A_1428 PMN2A_1429     FALSE 0.051 123.000 0.000 NA   NA
 1203490 1202694 PMN2A_1429 PMN2A_1430   hit FALSE 0.063 106.000 0.000 NA   NA
 1202694 1202695 PMN2A_1430 PMN2A_1431 hit def FALSE 0.279 70.000 0.013 1.000 N NA
 1202697 1202698 PMN2A_1433 PMN2A_1434     TRUE 0.822 -3.000 0.081 1.000 N NA
 1202698 1202699 PMN2A_1434 PMN2A_1435   sufC TRUE 0.977 -3.000 0.482 1.000 Y NA
 1202699 1202700 PMN2A_1435 PMN2A_1436 sufC   TRUE 0.960 51.000 0.466 1.000 Y NA
 1202701 1202702 PMN2A_1437 PMN2A_1438     FALSE 0.009 286.000 0.000 NA   NA
 1202702 1202703 PMN2A_1438 PMN2A_1439     TRUE 0.970 20.000 0.947 NA   NA
 1202703 1202704 PMN2A_1439 PMN2A_1440   pgm FALSE 0.321 64.000 0.017 NA   NA
 1202704 1202705 PMN2A_1440 PMN2A_1441 pgm   FALSE 0.157 88.000 0.009 1.000 N NA
 1202708 1202709 PMN2A_1444 PMN2A_1445   cysH FALSE 0.779 -24.000 0.026 1.000 N NA
 1202710 1202711 PMN2A_1446 PMN2A_1447   citT FALSE 0.283 100.000 0.296 1.000 N NA
 1202711 1203492 PMN2A_1447   citT   FALSE 0.672 3.000 0.000 NA   NA
 1203492 1202712   PMN2A_1448   trkG FALSE 0.641 -3.000 0.000 NA   NA
 1202712 1202713 PMN2A_1448 PMN2A_1449 trkG   TRUE 0.992 13.000 0.438 0.003 Y NA
 1202713 1202714 PMN2A_1449 PMN2A_1450     FALSE 0.700 4.000 0.017 NA N NA
 1202716 1202717 PMN2A_1452 PMN2A_1453     TRUE 0.950 34.000 0.533 NA   NA
 1202721 1202722 PMN2A_1457 PMN2A_1458     TRUE 0.896 56.000 1.000 NA   NA
 1202722 1202723 PMN2A_1458 PMN2A_1459     FALSE 0.322 102.000 0.421 NA   NA
 1202723 1202724 PMN2A_1459 PMN2A_1460   xseA TRUE 0.806 34.000 0.002 1.000   NA
 1202724 1203493 PMN2A_1460 PMN2A_1461 xseA   TRUE 0.982 28.000 0.412 0.002   NA
 1203494 1202725 PMN2A_1462 PMN2A_1463   rbn FALSE 0.684 63.000 0.379 NA   NA
 1202725 1202726 PMN2A_1463 PMN2A_1464 rbn   FALSE 0.141 132.000 0.154 1.000   NA
 1202726 1202727 PMN2A_1464 PMN2A_1465     TRUE 0.784 18.000 0.000 1.000 N NA
 1202727 1202728 PMN2A_1465 PMN2A_1466     FALSE 0.727 38.000 0.000 1.000 N NA
 1202728 1203495 PMN2A_1466       FALSE 0.016 195.000 0.000 NA   NA
 1202729 1202730 PMN2A_1467 PMN2A_1468   nadB TRUE 0.816 14.000 0.024 NA   NA
 1202731 1203496 PMN2A_1469 PMN2A_1470     FALSE 0.019 177.000 0.000 NA   NA
 1203496 1202732 PMN2A_1470 PMN2A_1471     FALSE 0.272 63.000 0.000 NA   NA
 1202732 1202733 PMN2A_1471 PMN2A_1472     FALSE 0.125 82.000 0.000 NA   NA
 1202733 1202734 PMN2A_1472 PMN2A_1473     FALSE 0.706 32.000 0.000 NA   NA
 1202734 1202735 PMN2A_1473 PMN2A_1474     FALSE 0.731 23.000 0.000 NA   NA
 1202735 1202736 PMN2A_1474 PMN2A_1475     TRUE 0.974 1.000 0.370 1.000 Y NA
 1202741 1202742 PMN2A_1479 PMN2A_1480   rbfA FALSE 0.672 3.000 0.000 NA   NA
 1202742 1202743 PMN2A_1480 PMN2A_1481 rbfA   TRUE 0.851 18.000 0.025 1.000 N NA
 1202743 1202744 PMN2A_1481 PMN2A_1482   hemD FALSE 0.190 87.000 0.022 1.000 N NA
 1202745 1202746 PMN2A_1483 PMN2A_1484   crtQ TRUE 0.955 4.000 0.800 NA   NA
 1202747 1202748 PMN2A_1485 PMN2A_1486     TRUE 0.812 32.000 0.050 NA   NA
 1202751 1202752 PMN2A_1489 PMN2A_1490     TRUE 0.968 21.000 0.714 1.000   NA
 1202752 1203497 PMN2A_1490       FALSE 0.600 45.000 0.000 NA   NA
 1202753 1202754 PMN2A_1491 PMN2A_1492     FALSE 0.122 83.000 0.000 NA   NA
 1202754 1202755 PMN2A_1492 PMN2A_1493     TRUE 0.875 24.000 0.117 NA   NA
 1202755 1309230 PMN2A_1493 PMN2A_R0030   tRNA-Asn FALSE 0.712 30.000 0.000 NA   NA
 1309230 1202756 PMN2A_R0030 PMN2A_1494 tRNA-Asn rpaA FALSE 0.007 363.000 0.000 NA   NA
 1202757 1202758 PMN2A_1495 PMN2A_1496 holB tmk TRUE 0.904 2.000 0.254 1.000 N NA
 1202758 1202759 PMN2A_1496 PMN2A_1497 tmk zntA FALSE 0.766 -3.000 0.020 1.000 N NA
 1202762 1202763 PMN2A_1500 PMN2A_1501   plsX TRUE 0.817 5.000 0.026 1.000 N NA
 1202763 1202764 PMN2A_1501 PMN2A_1502 plsX fabH TRUE 0.959 58.000 0.380 0.007 Y NA
 1202764 1202765 PMN2A_1502 PMN2A_1503 fabH fabD TRUE 0.985 28.000 0.043 0.007 Y NA
 1202765 1202766 PMN2A_1503 PMN2A_1504 fabD   TRUE 0.968 3.000 0.218 1.000 Y NA
 1202767 1202768 PMN2A_1505 PMN2A_1506   ycf34 FALSE 0.733 -39.000 0.023 NA   NA
 1202769 1202770 PMN2A_1507 PMN2A_1508     FALSE 0.551 67.000 0.191 1.000   NA
 1202771 1202772 PMN2A_1509 PMN2A_1510 crtB,pys pds FALSE 0.656 76.000 0.691 1.000   NA
 1202773 1202774 PMN2A_1511 PMN2A_1512     FALSE 0.641 -3.000 0.000 NA   NA
 1202776 1202777 PMN2A_1514 PMN2A_1515   ndhF TRUE 0.821 26.000 0.041 NA   NA
 1202777 1202778 PMN2A_1515 PMN2A_1516 ndhF   FALSE 0.679 100.000 0.050 0.003 Y NA
 1202778 1202779 PMN2A_1516 PMN2A_1517     FALSE 0.289 65.000 0.009 NA   NA
 1202779 1202780 PMN2A_1517 PMN2A_1518     FALSE 0.528 57.000 0.034 NA   NA
 1202783 1202784 PMN2A_1521 PMN2A_1522     FALSE 0.220 87.000 0.090 NA   NA
 1202784 1202785 PMN2A_1522 PMN2A_1523     TRUE 0.877 7.000 0.101 1.000   NA
 1202785 1202786 PMN2A_1523 PMN2A_1524   ndhE TRUE 0.856 10.000 0.071 1.000 N NA
 1202786 1202787 PMN2A_1524 PMN2A_1525 ndhE ndhG TRUE 0.992 35.000 0.506 0.005 Y NA
 1202787 1202788 PMN2A_1525 PMN2A_1526 ndhG ndhI TRUE 0.983 -3.000 0.192 0.012 Y NA
 1202788 1202789 PMN2A_1526 PMN2A_1527 ndhI ndhA FALSE 0.688 110.000 0.242 0.012 Y NA
 1202789 1202790 PMN2A_1527 PMN2A_1528 ndhA gltA FALSE 0.717 74.000 0.137 1.000 Y NA
 1202794 1202795 PMN2A_1532 PMN2A_1533 sui1 cysC FALSE 0.663 53.000 0.047 1.000 N NA
 1202797 1202798 PMN2A_1535 PMN2A_1536 nagA chlM TRUE 0.887 29.000 0.128 1.000 N NA
 1202802 1202803 PMN2A_1540 PMN2A_1541 ndhH   TRUE 0.853 -10.000 0.182 NA   NA
 1202804 1202805 PMN2A_1542 PMN2A_1543 menE menC TRUE 0.967 -3.000 0.283 0.002 N NA
 1202805 1202806 PMN2A_1543 PMN2A_1544 menC menA TRUE 0.970 24.000 0.096 1.000 Y NA
 1202808 1202809 PMN2A_1546 PMN2A_1547 gshB grxC FALSE 0.770 4.000 0.010 1.000 N NA
 1202810 1202811   PMN2A_1548   prfB FALSE 0.092 92.000 0.000 NA   NA
 1202811 1202812 PMN2A_1548 PMN2A_1549 prfB   TRUE 0.813 12.000 0.025 NA   NA
 1202812 1202813 PMN2A_1549 PMN2A_1550     TRUE 0.790 5.000 0.039 NA   NA
 1202813 1202814 PMN2A_1550 PMN2A_1551   dgkA TRUE 0.876 26.000 0.123 NA   NA
 1202814 1202815 PMN2A_1551 PMN2A_1552 dgkA pabA TRUE 0.920 14.000 0.231 1.000 N NA
 1202816 1202817 PMN2A_1553 PMN2A_1554   argS FALSE 0.760 0.000 0.015 1.000 N NA
 1202817 1202818 PMN2A_1554 PMN2A_1555 argS nadC FALSE 0.309 68.000 0.014 1.000 N NA
 1202818 1202819 PMN2A_1555 PMN2A_1556 nadC thdF FALSE 0.017 300.000 0.014 1.000   NA
 1203499 1202820   PMN2A_1557     FALSE 0.299 61.000 0.000 NA   NA
 1202823 1202824 PMN2A_1560 PMN2A_1561 rluD   TRUE 0.793 0.000 0.018 1.000   NA
 1202828 1202829 PMN2A_1565 PMN2A_1566   pyrD FALSE 0.193 82.000 0.016 1.000 N NA
 1202829 1202830 PMN2A_1566 PMN2A_1567 pyrD rnhA TRUE 0.784 -13.000 0.031 1.000 N NA
 1202830 1202831 PMN2A_1567 PMN2A_1568 rnhA rplL FALSE 0.297 68.000 0.008 1.000 N NA
 1202831 1202832 PMN2A_1568 PMN2A_1569 rplL rplJ TRUE 0.982 53.000 0.884 0.032 Y NA
 1202832 1202833 PMN2A_1569 PMN2A_1570 rplJ rplA FALSE 0.297 224.000 0.302 0.042 Y NA
 1202833 1202834 PMN2A_1570 PMN2A_1571 rplA rplK TRUE 0.926 71.000 0.838 0.042 Y NA
 1202834 1202835 PMN2A_1571 PMN2A_1572 rplK nusG FALSE 0.413 104.000 0.681 1.000 N NA
 1202835 1202836 PMN2A_1572 PMN2A_1573 nusG secE TRUE 0.955 43.000 0.843 1.000   NA
 1202836 1202837 PMN2A_1573 PMN2A_1574 secE clpB2 FALSE 0.314 73.000 0.023 1.000   NA
 1202839 1202840 PMN2A_1576 PMN2A_1577     TRUE 0.899 51.000 0.576 NA   NA
 1203500 1202841   PMN2A_1578     FALSE 0.212 68.000 0.000 NA   NA
 1202842 1202843 PMN2A_1579 PMN2A_1580     TRUE 0.886 12.000 0.152 NA   NA
 1202843 1202844 PMN2A_1580 PMN2A_1581     FALSE 0.703 47.000 0.048 NA   NA
 1202845 1202846 PMN2A_1582 PMN2A_1583   hemB FALSE 0.748 35.000 0.000 1.000 N NA
 1202846 1202847 PMN2A_1583 PMN2A_1584 hemB   FALSE 0.746 49.000 0.033 1.000   NA
 1202847 1202848 PMN2A_1584 PMN2A_1585     TRUE 0.869 16.000 0.044 1.000   NA
 1202848 1202849 PMN2A_1585 PMN2A_1586   obg FALSE 0.123 100.000 0.008 1.000   NA
 1202849 1202850 PMN2A_1586 PMN2A_1587 obg   FALSE 0.141 78.000 0.000 NA   NA
 1202851 1202852 PMN2A_1588 PMN2A_1589     FALSE 0.021 169.000 0.000 NA   NA
 1202852 1202853 PMN2A_1589 PMN2A_1590   ecm4 TRUE 0.913 10.000 0.265 NA   NA
 1202856 1202857 PMN2A_1592 PMN2A_1593 psbA aroC FALSE 0.065 131.000 0.000 1.000   NA
 1202858 1202859 PMN2A_1594 PMN2A_1595 eda   TRUE 0.951 17.000 0.415 1.000 N NA
 1202859 1202860 PMN2A_1595 PMN2A_1596   met3 TRUE 0.783 44.000 0.061 1.000 N NA
 1202860 1202861 PMN2A_1596 PMN2A_1597 met3 psbO FALSE 0.254 85.000 0.064 1.000   NA
 1202864 1202865 PMN2A_1600 PMN2A_1601 pyrB mpg FALSE 0.758 -3.000 0.019 1.000 N NA
 1202867 1309241 PMN2A_1603 PMN2A_R0031 crtR tRNA-Leu FALSE 0.531 50.000 0.000 NA   NA
 1202868 1202869 PMN2A_1604 PMN2A_1605   ileS FALSE 0.629 52.000 0.025 NA   NA
 1202871 1202872 PMN2A_1607 PMN2A_1608     FALSE 0.189 81.000 0.000 1.000   NA
 1202873 1202874 PMN2A_1609 PMN2A_1610 thy1 dcd TRUE 0.956 3.000 0.042 1.000 Y NA
 1202874 1202875 PMN2A_1610 PMN2A_1611 dcd   TRUE 0.840 1.000 0.091 1.000 N NA
 1202876 1202877 PMN2A_1612 PMN2A_1613 ntcA   TRUE 0.860 56.000 0.612 NA   NA
 1202877 1202878 PMN2A_1613 PMN2A_1614     FALSE 0.776 1.000 0.047 NA   NA
 1202879 1202880 PMN2A_1615 PMN2A_1616   pth TRUE 0.809 14.000 0.022 NA   NA
 1202880 1202881 PMN2A_1616 PMN2A_1617 pth   FALSE 0.375 62.000 0.002 1.000 N NA
 1202881 1202882 PMN2A_1617 PMN2A_1618   psbH TRUE 0.945 34.000 0.048 0.084   NA
 1202883 1202884 PMN2A_1619 PMN2A_1620 psbI   FALSE 0.082 141.000 0.107 NA   NA
 1202885 1202886 PMN2A_1621 PMN2A_1622 leuD leuC TRUE 0.991 25.000 0.268 0.002 Y NA
 1202886 1202887 PMN2A_1622 PMN2A_1623 leuC cinA TRUE 0.868 24.000 0.032 1.000   NA
 1202887 1202888 PMN2A_1623 PMN2A_1624 cinA glyA FALSE 0.774 -13.000 0.018 1.000   NA
 1202888 1309240 PMN2A_1624 PMN2A_R0032 glyA tRNA-Arg FALSE 0.048 125.000 0.000 NA   NA
 1202889 1202890 PMN2A_1625 PMN2A_1626     TRUE 0.934 26.000 0.359 NA   NA
 1202892 1202893 PMN2A_1628 PMN2A_1629 sfsA amtB FALSE 0.019 254.000 0.040 NA   NA
 1202893 1202894 PMN2A_1629 PMN2A_1630 amtB lytB FALSE 0.220 120.000 0.286 1.000 N NA
 1202894 1202895 PMN2A_1630 PMN2A_1631 lytB   FALSE 0.523 63.000 0.143 NA   NA
 1202898 1294578 PMN2A_1634       FALSE 0.016 200.000 0.000 NA   NA
 1202901 1202902 PMN2A_1637 PMN2A_1638 tgt psbK TRUE 0.846 35.000 0.034 1.000   NA
 1203502 1202903   PMN2A_1639     FALSE 0.174 72.000 0.000 NA   NA
 1202903 1202904 PMN2A_1639 PMN2A_1640     TRUE 0.816 38.000 0.078 NA   NA
 1202904 1309239 PMN2A_1640 PMN2A_R0033   tRNA-Met FALSE 0.731 15.000 0.000 NA   NA
 1202905 1202906 PMN2A_1641 PMN2A_1642 pyrE   FALSE 0.760 -3.000 0.034 NA   NA
 1202908 1202909 PMN2A_1644 PMN2A_1645     FALSE 0.758 -7.000 0.020 1.000 N NA
 1202910 1202911 PMN2A_1646 PMN2A_1647     FALSE 0.169 89.000 0.020 1.000 N NA
 1202911 1202912 PMN2A_1647 PMN2A_1648   fabI TRUE 0.819 32.000 0.021 1.000 N NA
 1202913 1202914 PMN2A_1649 PMN2A_1650   degT FALSE 0.716 52.000 0.057 1.000   NA
 1202915 1202916 PMN2A_1651 PMN2A_1652 phrB   TRUE 0.947 -36.000 0.038 1.000 Y NA
 1202916 1202917 PMN2A_1652 PMN2A_1653   folK FALSE 0.347 69.000 0.033 1.000 N NA
 1202919 1202920 PMN2A_1655 PMN2A_1656     TRUE 0.981 5.000 0.690 NA Y NA
 1202922 1202923 PMN2A_1658 PMN2A_1659 ndhJ ndhK TRUE 0.992 18.000 0.406 0.005 Y NA
 1202923 1202924 PMN2A_1659 PMN2A_1660 ndhK ndhC TRUE 0.988 -9.000 0.428 0.005 Y NA
 1202925 1202926 PMN2A_1661 PMN2A_1662     TRUE 0.935 -3.000 0.521 NA   NA
 1202926 1202927 PMN2A_1662 PMN2A_1663   psbE FALSE 0.366 108.000 0.625 NA   NA
 1202927 1202928 PMN2A_1663 PMN2A_1664 psbE psbL TRUE 0.960 30.000 0.047 0.006   NA
 1202928 1202929 PMN2A_1664 PMN2A_1665 psbL psbJ TRUE 0.987 12.000 0.878 0.006   NA
 1202932 1202933 PMN2A_1668 PMN2A_1669   uvrD TRUE 0.789 44.000 0.025 1.000   NA
 1202933 1203503 PMN2A_1669 PMN2A_1670 uvrD   FALSE 0.119 89.000 0.007 NA   NA
 1202934 1202935 PMN2A_1671 PMN2A_1672 cpeB cpeA TRUE 0.901 57.000 0.167 0.002   NA
 1202935 1202936 PMN2A_1672 PMN2A_1673 cpeA cpeZ FALSE 0.261 71.000 0.000 1.000   NA
 1202939 1202940 PMN2A_1676 PMN2A_1677 cpeT cpeS TRUE 0.949 15.000 0.444 NA   NA
 1202940 1202941 PMN2A_1677 PMN2A_1678 cpeS   FALSE 0.157 88.000 0.000 1.000   NA
 1202941 1202942 PMN2A_1678 PMN2A_1679     FALSE 0.065 105.000 0.000 NA   NA
 1202943 1202944 PMN2A_1680 PMN2A_1681     FALSE 0.756 90.000 0.073 0.003 Y NA
 1203504 1203505 PMN2A_1682       FALSE 0.007 417.000 0.000 NA   NA
 1202946 1309238 PMN2A_1684 PMN2A_R0034   tRNA-Phe FALSE 0.008 322.000 0.000 NA   NA
 1309238 1203506 PMN2A_R0034 PMN2A_1685 tRNA-Phe   FALSE 0.033 145.000 0.000 NA   NA
 1203506 1202947 PMN2A_1685 PMN2A_1686   xylB FALSE 0.123 98.000 0.041 NA   NA
 1202947 1202948 PMN2A_1686 PMN2A_1687 xylB metK TRUE 0.854 20.000 0.028 1.000 N NA
 1202948 1202949 PMN2A_1687 PMN2A_1688 metK   TRUE 0.868 24.000 0.030 1.000   NA
 1202949 1202950 PMN2A_1688 PMN2A_1689   rps1a, rpsA1 TRUE 0.900 19.000 0.112 1.000   NA
 1202950 1202951 PMN2A_1689 PMN2A_1690 rps1a, rpsA1   FALSE 0.143 104.000 0.025 1.000   NA
 1202951 1202952 PMN2A_1690 PMN2A_1691   psbT FALSE 0.059 160.000 0.028 1.000   NA
 1202952 1202953 PMN2A_1691 PMN2A_1692 psbT psbB TRUE 0.975 39.000 0.651 0.082   NA
 1203507 1202954   PMN2A_1693   psbM FALSE 0.014 209.000 0.000 NA   NA
 1202954 1202955 PMN2A_1693 PMN2A_1694 psbM   FALSE 0.068 135.000 0.047 NA   NA
 1202955 1202956 PMN2A_1694 PMN2A_1695   hemK FALSE 0.345 67.000 0.056 NA   NA
 1202956 1202957 PMN2A_1695 PMN2A_1696 hemK sua5 TRUE 0.928 -22.000 0.000 NA Y NA
 1202957 1362574 PMN2A_1696   sua5 pseudo FALSE 0.704 9.000 0.000 NA   NA
 1309237 1202958 PMN2A_R0035 PMN2A_1697 tRNA-Thr minE FALSE 0.061 109.000 0.000 NA   NA
 1202958 1202959 PMN2A_1697 PMN2A_1698 minE minD TRUE 0.976 11.000 0.347 NA Y NA
 1202959 1202960 PMN2A_1698 PMN2A_1699 minD minC FALSE 0.312 164.000 0.368 1.000 Y NA
 1202960 1202961 PMN2A_1699 PMN2A_1700 minC   TRUE 0.831 3.000 0.038 1.000   NA
 1202961 1202962 PMN2A_1700 PMN2A_1701     TRUE 0.851 4.000 0.071 1.000   NA
 1202963 1202964 PMN2A_1702 PMN2A_1703 petB petD TRUE 0.888 60.000 0.471 0.082   NA
 1309410 1309231 PMN2A_R0036 PMN2A_R0037 rrs tRNA-Ile FALSE 0.022 168.000 0.000 NA   NA
 1309231 1309232 PMN2A_R0037 PMN2A_R0038 tRNA-Ile tRNA-Ala FALSE 0.709 10.000 0.000 NA   NA
 1309232 1365777 PMN2A_R0038 PMN2A_R0039 tRNA-Ala rrl FALSE 0.008 310.000 0.000 NA   NA
 1365777 1309411 PMN2A_R0039 PMN2A_R0040 rrl rrf FALSE 0.092 92.000 0.000 NA   NA
 1202966 1202967 PMN2A_1705 PMN2A_1706 mutM psaE TRUE 0.867 15.000 0.040 1.000   NA
 1202969 1202970 PMN2A_1708 PMN2A_1709     FALSE 0.704 45.000 0.000 1.000   NA
 1203510 1202971 PMN2A_1710 PMN2A_1711     FALSE 0.135 79.000 0.000 NA   NA
 1294515 1362575       pseudo FALSE 0.026 158.000 0.000 NA   NA
 1202972 1202973 PMN2A_1712 PMN2A_1713     FALSE 0.012 232.000 0.000 NA   NA
 1203511 1202976   PMN2A_1716     FALSE 0.654 0.000 0.000 NA   NA
 1202976 1202977 PMN2A_1716 PMN2A_1717     FALSE 0.654 0.000 0.000 NA   NA
 1202977 1202978 PMN2A_1717 PMN2A_1718     FALSE 0.654 0.000 0.000 NA   NA
 1202978 1294605 PMN2A_1718       FALSE 0.006 439.000 0.000 NA   NA
 1294605 1202979   PMN2A_1719     FALSE 0.006 472.000 0.000 NA   NA
 1202979 1203513 PMN2A_1719 PMN2A_1720     FALSE 0.632 -7.000 0.000 NA   NA
 1309236 1309235 PMN2A_R0041 PMN2A_R0042 tRNA-Thr tRNA-Tyr FALSE 0.717 12.000 0.000 NA   NA
 1202980 1202981 PMN2A_1721 PMN2A_1722 aroQ miaE TRUE 0.831 8.000 0.039 1.000 N NA
 1202981 1202982 PMN2A_1722 PMN2A_1723 miaE cobI/cbiL TRUE 0.803 37.000 0.022 1.000 N NA
 1202984 1202985 PMN2A_1726 PMN2A_1727   cbiQ TRUE 0.856 10.000 0.029 1.000   NA
 1202985 1202986 PMN2A_1727 PMN2A_1728 cbiQ   TRUE 0.950 16.000 0.447 NA   NA
 1202986 1202987 PMN2A_1728 PMN2A_1729     TRUE 0.832 12.000 0.065 NA   NA
 1202987 1202988 PMN2A_1729 PMN2A_1730     FALSE 0.079 162.000 0.194 NA   NA
 1202988 1202989 PMN2A_1730 PMN2A_1731   proC TRUE 0.914 18.000 0.224 NA   NA
 1202990 1202991 PMN2A_1732 PMN2A_1733   recO FALSE 0.086 117.000 0.009 1.000 N NA
 1202991 1202992 PMN2A_1733 PMN2A_1734 recO deoC FALSE 0.761 0.000 0.016 1.000 N NA
 1202992 1202993 PMN2A_1734 PMN2A_1735 deoC lrtA TRUE 0.799 15.000 0.039 NA N NA
 1202994 1202995 PMN2A_1736 PMN2A_1737 lipB fadD FALSE 0.707 50.000 0.029 1.000 N NA
 1202995 1202996 PMN2A_1737 PMN2A_1738 fadD   FALSE 0.466 81.000 0.388 NA   NA
 1202996 1202997 PMN2A_1738 PMN2A_1739   aceF FALSE 0.053 191.000 0.176 NA   NA
 1202997 1202998 PMN2A_1739 PMN2A_1740 aceF queA FALSE 0.588 54.000 0.014 1.000 N NA
 1202999 1203000 PMN2A_1741 PMN2A_1742     FALSE 0.735 89.000 0.095 0.022 Y NA
 1203000 1203001 PMN2A_1742 PMN2A_1743   metB TRUE 0.987 -3.000 0.250 0.001 Y NA
 1203001 1203002 PMN2A_1743 PMN2A_1744 metB rpsD FALSE 0.101 102.000 0.008 1.000 N NA
 1203003 1203004 PMN2A_1745 PMN2A_1746     FALSE 0.753 -3.000 0.025 NA   NA
 1203004 1203005 PMN2A_1746 PMN2A_1747   murE FALSE 0.032 217.000 0.049 1.000   NA
 1203515 1203007   PMN2A_1749     FALSE 0.006 510.000 0.000 NA   NA
 1203007 1203008 PMN2A_1749 PMN2A_1750     FALSE 0.031 172.000 0.000 1.000   NA
 1203008 1203516 PMN2A_1750       FALSE 0.722 13.000 0.000 NA   NA
 1203516 1203009   PMN2A_1751     FALSE 0.097 90.000 0.000 NA   NA
 1362576 1203517     pseudo   FALSE 0.212 68.000 0.000 NA   NA
 1203014 1203015 PMN2A_1756 PMN2A_1757     FALSE 0.028 184.000 0.000 1.000   NA
 1203017 1203018 PMN2A_1759 PMN2A_1760 chlG   FALSE 0.733 16.000 0.000 NA   NA
 1203019 1203020 PMN2A_1761 PMN2A_1762 hisF ubiE FALSE 0.185 83.000 0.012 1.000 N NA
 1203022 1203023 PMN2A_1764 PMN2A_1765 pspA birA FALSE 0.054 116.000 0.005 NA N NA
 1203024 1203025 PMN2A_1766 PMN2A_1767 salX ndhB TRUE 0.844 -25.000 0.134 1.000 N NA
 1203026 1203027 PMN2A_1768 PMN2A_1769 topA   FALSE 0.760 5.000 0.020 NA   NA
 1203027 1203028 PMN2A_1769 PMN2A_1770     TRUE 0.845 6.000 0.105 NA   NA
 1203028 1203029 PMN2A_1770 PMN2A_1771   cobT TRUE 0.877 7.000 0.155 NA   NA
 1203029 1203030 PMN2A_1771 PMN2A_1772 cobT   TRUE 0.859 6.000 0.130 NA   NA
 1203030 1203031 PMN2A_1772 PMN2A_1773   ribE FALSE 0.114 85.000 0.000 NA   NA
 1203032 1203033 PMN2A_1774 PMN2A_1775   ctaE FALSE 0.509 96.000 1.000 NA   NA
 1203033 1203034 PMN2A_1775 PMN2A_1776 ctaE cyoB TRUE 0.990 -3.000 0.500 0.002 Y NA
 1203034 1203035 PMN2A_1776 PMN2A_1777 cyoB cyoA TRUE 0.992 5.000 0.500 0.002 Y NA
 1203036 1203037 PMN2A_1778 PMN2A_1779 ctaA cyoE TRUE 0.953 -7.000 0.090 1.000 Y NA
 1203037 1203038 PMN2A_1779 PMN2A_1780 cyoE ccmA FALSE 0.134 102.000 0.033 1.000 N NA
 1203038 1203039 PMN2A_1780 PMN2A_1781 ccmA   TRUE 0.933 32.000 0.321 1.000   NA
 1203039 1203040 PMN2A_1781 PMN2A_1782     TRUE 0.890 30.000 0.176 NA   NA
 1203045 1203046 PMN2A_1787 PMN2A_1788   ubiA TRUE 0.846 26.000 0.043 1.000 N NA
 1203048 1203049 PMN2A_1790 PMN2A_1791   cobM FALSE 0.104 118.000 0.016 1.000   NA
 1203049 1203050 PMN2A_1791 PMN2A_1792 cobM lgt TRUE 0.801 -3.000 0.061 1.000 N NA
 1203050 1203051 PMN2A_1792 PMN2A_1793 lgt petA TRUE 0.958 14.000 0.476 1.000   NA
 1203051 1203052 PMN2A_1793 PMN2A_1794 petA petC TRUE 0.983 8.000 0.881 0.055   NA
 1203054 1203055 PMN2A_1796 PMN2A_1797 tatC   FALSE 0.021 232.000 0.027 NA   NA
 1203055 1203056 PMN2A_1797 PMN2A_1798     FALSE 0.728 42.000 0.020 NA   NA
 1203058 1203059 PMN2A_1800 PMN2A_1801 psaJ psaF TRUE 0.960 48.000 0.455 0.021   NA
 1203060 1203061 PMN2A_1802 PMN2A_1803 qri7   FALSE 0.768 30.000 0.015 NA   NA
 1203061 1203062 PMN2A_1803 PMN2A_1804     FALSE 0.026 182.000 0.018 NA   NA
 1203062 1203063 PMN2A_1804 PMN2A_1805   nhaP FALSE 0.020 171.000 0.000 NA   NA
 1203064 1309234 PMN2A_1806 PMN2A_R0043 gltX tRNA-Asp FALSE 0.628 -26.000 0.000 NA   NA
 1309234 1203065 PMN2A_R0043 PMN2A_1807 tRNA-Asp   FALSE 0.015 202.000 0.000 NA   NA
 1203065 1309233 PMN2A_1807 PMN2A_R0044   tRNA-Trp FALSE 0.688 36.000 0.000 NA   NA
 1309233 1203066 PMN2A_R0044 PMN2A_1808 tRNA-Trp rplS FALSE 0.314 60.000 0.000 NA   NA
 1203066 1203519 PMN2A_1808   rplS   FALSE 0.014 210.000 0.000 NA   NA
 1203069 1203070 PMN2A_1811 PMN2A_1812 pta   TRUE 0.861 41.000 0.177 NA   NA
 1203070 1203071 PMN2A_1812 PMN2A_1813     FALSE 0.072 126.000 0.021 NA   NA
 1203071 1203072 PMN2A_1813 PMN2A_1814     FALSE 0.739 42.000 0.021 NA   NA
 1203072 1203073 PMN2A_1814 PMN2A_1815   hflC FALSE 0.197 139.000 0.429 NA   NA
 1203074 1203075 PMN2A_1816 PMN2A_1817 hemL xthA FALSE 0.013 271.000 0.000 1.000 N NA
 1203076 1203077 PMN2A_1818 PMN2A_1819     FALSE 0.467 70.000 0.217 NA   NA
 1203077 1203078 PMN2A_1819 PMN2A_1820     FALSE 0.350 66.000 0.042 NA   NA
 1203078 1203079 PMN2A_1820 PMN2A_1821     FALSE 0.768 0.000 0.042 NA   NA
 1203080 1203081 PMN2A_1822 PMN2A_1823 thiP   TRUE 0.798 28.000 0.021 NA   NA
 1203081 1203082 PMN2A_1823 PMN2A_1824     FALSE 0.763 26.000 0.008 NA   NA
 1203082 1203083 PMN2A_1824 PMN2A_1825     FALSE 0.749 2.000 0.020 NA   NA
 1203084 1203085 PMN2A_1826 PMN2A_1827     FALSE 0.176 128.000 0.246 1.000 N NA
 1203086 1203087 PMN2A_1828 PMN2A_1829 hemC   FALSE 0.039 160.000 0.009 1.000 N NA
 1203520 1203088   PMN2A_1830   priA FALSE 0.680 37.000 0.000 NA   NA
 1203089 1203090 PMN2A_1831 PMN2A_1832   argB FALSE 0.763 1.000 0.023 NA   NA
 1203090 1203091 PMN2A_1832 PMN2A_1833 argB   FALSE 0.752 -7.000 0.027 NA   NA
 1203094 1203521 PMN2A_1836 PMN2A_1837 cobK cutA TRUE 0.854 16.000 0.031 1.000 N NA
 1203095 1203096 PMN2A_1838 PMN2A_1839   purA FALSE 0.695 42.000 0.021 NA N NA
 1203096 1203097 PMN2A_1839 PMN2A_1840 purA psb27 FALSE 0.121 96.000 0.022 NA   NA
 1203097 1203098 PMN2A_1840 PMN2A_1841 psb27 proS FALSE 0.686 47.000 0.023 NA   NA
 1203099 1203100 PMN2A_1842 PMN2A_1843     FALSE 0.066 104.000 0.000 NA   NA
 1203100 1203101 PMN2A_1843 PMN2A_1844     FALSE 0.629 -13.000 0.000 NA   NA
 1203101 1203102 PMN2A_1844 PMN2A_1845   arsC FALSE 0.662 53.000 0.045 1.000 N NA
 1203102 1203103 PMN2A_1845 PMN2A_1846 arsC   FALSE 0.228 83.000 0.030 1.000 N NA
 1203105 1203106 PMN2A_1848 PMN2A_1849     FALSE 0.281 85.000 0.150 NA   NA
 1203106 1203107 PMN2A_1849 PMN2A_1850     FALSE 0.776 9.000 0.020 NA   NA
 1203107 1203108 PMN2A_1850 PMN2A_1851   tal FALSE 0.232 93.000 0.131 1.000 N NA
 1203109 1203110 PMN2A_1852 PMN2A_1853 fixC frr FALSE 0.775 -3.000 0.022 1.000 N NA
 1203110 1203111 PMN2A_1853 PMN2A_1854 frr pyrH FALSE 0.703 69.000 0.626 1.000 N NA
 1203111 1203112 PMN2A_1854 PMN2A_1855 pyrH cobO FALSE 0.113 98.000 0.010 1.000 N NA
 1203112 1203113 PMN2A_1855 PMN2A_1856 cobO   FALSE 0.243 83.000 0.024 1.000   NA
 1203114 1203115 PMN2A_1857 PMN2A_1858 hemH ilvB FALSE 0.258 146.000 0.031 1.000 Y NA
 1203115 1203522 PMN2A_1858 PMN2A_1859 ilvB   TRUE 0.884 28.000 0.149 NA   NA
 1203116 1203117 PMN2A_1860 PMN2A_1861   rps1b, rpsA2, nbp1 TRUE 0.955 24.000 0.513 NA   NA
 1203118 1203119 PMN2A_1862 PMN2A_1863     FALSE 0.609 75.000 0.465 1.000   NA
 1203119 1203120 PMN2A_1863 PMN2A_1864     FALSE 0.445 139.000 0.659 0.033   NA
 1203120 1203121 PMN2A_1864 PMN2A_1865   accA TRUE 0.870 21.000 0.033 1.000   NA
 1203121 1203122 PMN2A_1865 PMN2A_1866 accA   TRUE 0.860 12.000 0.033 1.000   NA
 1203126 1203127 PMN2A_1870 PMN2A_1871     FALSE 0.528 69.000 0.274 NA   NA
 1203129 1203130 PMN2A_1873 PMN2A_1874 chlN chlB TRUE 0.992 5.000 0.591 0.002 Y NA
 1203134 1203135 PMN2A_1878 PMN2A_1879 ccmK rbcL FALSE 0.527 72.000 0.373 NA N NA
 1203135 1203136 PMN2A_1879 PMN2A_1880 rbcL rbcS FALSE 0.608 101.000 0.392 0.001 N NA
 1203136 1203137 PMN2A_1880 PMN2A_1881 rbcS csoS2 FALSE 0.360 100.000 0.474 NA   NA
 1203137 1203138 PMN2A_1881 PMN2A_1882 csoS2 csoS3 TRUE 0.965 8.000 0.925 NA   NA
 1203138 1203139 PMN2A_1882 PMN2A_1883 csoS3   TRUE 0.958 1.000 0.925 NA   NA
 1203139 1203140 PMN2A_1883 PMN2A_1884     TRUE 0.982 0.000 0.868 NA Y NA
 1203140 1203141 PMN2A_1884 PMN2A_1885     FALSE 0.600 45.000 0.000 NA   NA
 1203141 1203142 PMN2A_1885 PMN2A_1886     FALSE 0.150 76.000 0.000 NA   NA
 1203143 1203144 PMN2A_1887 PMN2A_1888   tdcF FALSE 0.173 88.000 0.031 NA   NA
 1203144 1203145 PMN2A_1888 PMN2A_1889 tdcF   FALSE 0.677 46.000 0.020 NA   NA
 1203146 1203147 PMN2A_1890 PMN2A_1891 hisG   FALSE 0.760 -13.000 0.021 1.000 N NA
 1203147 1203148 PMN2A_1891 PMN2A_1892     TRUE 0.925 14.000 0.222 1.000   NA
 1203149 1203150 PMN2A_1893 PMN2A_1894     TRUE 0.826 -51.000 0.135 NA   NA
 1201422 1203151 PMN2A_0005       FALSE 0.632 -7.000 0.000 NA   NA
 1201423 1201424 PMN2A_0006 PMN2A_0007     TRUE 0.961 4.000 0.925 NA   NA
 1201424 1201425 PMN2A_0007 PMN2A_0008   trpA FALSE 0.434 84.000 0.375 NA   NA
 1201425 1201426 PMN2A_0008 PMN2A_0009 trpA   FALSE 0.180 78.000 0.014 NA   NA
 1201427 1201428 PMN2A_0010 PMN2A_0011     TRUE 0.880 14.000 0.071 1.000   NA
 1201428 1294487 PMN2A_0011 PMN2A_0012     TRUE 0.942 -15.000 0.714 NA   NA
 1294487 1201429 PMN2A_0012 PMN2A_0013     TRUE 0.959 3.000 0.905 NA   NA
 1201429 1203152 PMN2A_0013       FALSE 0.009 294.000 0.000 NA   NA
 1203152 1201430   PMN2A_0014   hisI FALSE 0.531 50.000 0.000 NA   NA
 1201432 1201433 PMN2A_0016 PMN2A_0017 clpB petE FALSE 0.011 380.000 0.000 1.000   NA
 1201433 1201434 PMN2A_0017 PMN2A_0018 petE   TRUE 0.842 55.000 0.404 1.000 N NA
 1201434 1201435 PMN2A_0018 PMN2A_0019   hemE TRUE 0.792 -3.000 0.032 1.000 N NA
 1201435 1201436 PMN2A_0019 PMN2A_0020 hemE glgB FALSE 0.047 162.000 0.024 1.000 N NA
 1201436 1201437 PMN2A_0020 PMN2A_0021 glgB   FALSE 0.745 57.000 0.220 1.000   NA
 1201437 1201438 PMN2A_0021 PMN2A_0022     TRUE 0.959 8.000 0.760 NA   NA
 1201438 1203153 PMN2A_0022 PMN2A_0023     TRUE 0.923 48.000 0.684 NA   NA
 1203153 1201439 PMN2A_0023 PMN2A_0024     TRUE 0.891 -7.000 0.317 NA   NA
 1201440 1201441 PMN2A_0025 PMN2A_0026   proA FALSE 0.032 146.000 0.000 NA   NA
 1201441 1201442 PMN2A_0026 PMN2A_0027 proA folB FALSE 0.778 -3.000 0.023 1.000 N NA
 1201442 1201443 PMN2A_0027 PMN2A_0028 folB   TRUE 0.826 1.000 0.047 1.000   NA
 1201444 1201445 PMN2A_0029 PMN2A_0030 prlC   TRUE 0.954 17.000 0.444 1.000 N NA
 1201445 1201446 PMN2A_0030 PMN2A_0031   thrB TRUE 0.819 37.000 0.031 1.000 N NA
 1201446 1201447 PMN2A_0031 PMN2A_0032 thrB glk TRUE 0.820 30.000 0.020 1.000 N NA
 1201447 1201448 PMN2A_0032 PMN2A_0033 glk thrS TRUE 0.829 24.000 0.020 1.000 N NA
 1201448 1201449 PMN2A_0033 PMN2A_0034 thrS trpS TRUE 0.979 7.000 0.016 0.055 Y NA
 1201449 1201450 PMN2A_0034 PMN2A_0035 trpS   FALSE 0.776 1.000 0.034 NA   NA
 1201451 1201452 PMN2A_0036 PMN2A_0037     FALSE 0.330 75.000 0.065 1.000   NA
 1201452 1201453 PMN2A_0037 PMN2A_0038     TRUE 0.984 0.000 0.894 1.000 Y NA
 1201453 1201454 PMN2A_0038 PMN2A_0039     TRUE 0.982 -7.000 0.857 1.000 Y NA
 1201454 1201455 PMN2A_0039 PMN2A_0040     TRUE 0.854 13.000 0.085 NA   NA
 1201456 1201457 PMN2A_0041 PMN2A_0042     FALSE 0.667 64.000 0.381 NA   NA
 1201458 1201459 PMN2A_0043 PMN2A_0044 menD menB TRUE 0.989 14.000 0.147 0.002 Y NA
 1201459 1201460 PMN2A_0044 PMN2A_0045 menB glgA FALSE 0.698 49.000 0.022 1.000 N NA
 1201460 1201461 PMN2A_0045 PMN2A_0046 glgA murF TRUE 0.842 46.000 0.182 1.000 N NA
 1201462 1201463 PMN2A_0047 PMN2A_0048 glmU   FALSE 0.770 36.000 0.021 NA   NA
 1201463 1201464 PMN2A_0048 PMN2A_0049   aroA FALSE 0.779 12.000 0.017 NA   NA
 1201464 1201465 PMN2A_0049 PMN2A_0050 aroA ubiD FALSE 0.412 56.000 0.009 NA N NA
 1201466 1201467 PMN2A_0051 PMN2A_0052     TRUE 0.862 28.000 0.051 1.000   NA
 1201467 1201468 PMN2A_0052 PMN2A_0053   amiC TRUE 0.823 0.000 0.051 1.000   NA
 1201468 1201469 PMN2A_0053 PMN2A_0054 amiC murI TRUE 0.954 3.000 0.022 1.000 Y NA
 1201469 1201470 PMN2A_0054 PMN2A_0055 murI sds TRUE 0.844 23.000 0.024 1.000 N NA
 1201474 1201475 PMN2A_0059 PMN2A_0060 dnaQ   FALSE 0.234 95.000 0.183 NA   NA
 1201475 1201476 PMN2A_0060 PMN2A_0061   hisS FALSE 0.053 128.000 0.003 NA   NA
 1201476 1201477 PMN2A_0061 PMN2A_0062 hisS ugd TRUE 0.806 14.000 0.008 1.000 N NA
 1201477 1203154 PMN2A_0062 PMN2A_0063 ugd   FALSE 0.079 96.000 0.000 NA   NA
 1203154 1201478 PMN2A_0063 PMN2A_0064     FALSE 0.169 73.000 0.000 NA   NA
 1201478 1201479 PMN2A_0064 PMN2A_0065     FALSE 0.042 131.000 0.000 NA   NA
 1201480 1201481 PMN2A_0066 PMN2A_0067     FALSE 0.014 293.000 0.000 1.000   NA
 1201481 1201482 PMN2A_0067 PMN2A_0068     FALSE 0.463 70.000 0.211 NA   NA
 1201484 1203155 PMN2A_0070 PMN2A_0071     FALSE 0.218 102.000 0.222 NA   NA
 1201485 1201486 PMN2A_0072 PMN2A_0073     TRUE 0.895 -3.000 0.235 1.000   NA
 1201486 1203156 PMN2A_0073       FALSE 0.641 -3.000 0.000 NA   NA
 1201488 1201489 PMN2A_0075 PMN2A_0076 mscS pncA FALSE 0.395 66.000 0.029 1.000 N NA
 1201491 1201492 PMN2A_0078 PMN2A_0079   stpA FALSE 0.238 87.000 0.059 1.000   NA
 1201493 1201494 PMN2A_0080 PMN2A_0081     FALSE 0.013 353.000 0.036 NA   NA
 1201494 1201495 PMN2A_0081 PMN2A_0082     FALSE 0.552 55.000 0.021 NA   NA
 1201495 1201496 PMN2A_0082 PMN2A_0083   MET17 TRUE 0.893 20.000 0.149 NA   NA
 1201496 1201497 PMN2A_0083 PMN2A_0084 MET17 metA TRUE 0.966 23.000 0.048 1.000 Y NA
 1201499 1201500 PMN2A_0086 PMN2A_0087     FALSE 0.007 388.000 0.000 NA   NA
 1201502 1201503 PMN2A_0089 PMN2A_0090     FALSE 0.704 9.000 0.000 NA   NA
 1203157 1309254   PMN2A_R0002   tRNA-Ser FALSE 0.008 334.000 0.000 NA   NA
 1203158 1201505 PMN2A_0092 PMN2A_0093   nrdJ FALSE 0.086 145.000 0.132 NA   NA
 1201506 1201507 PMN2A_0094 PMN2A_0095   prfC TRUE 0.824 37.000 0.021 1.000   NA
 1201507 1201508 PMN2A_0095 PMN2A_0096 prfC   FALSE 0.483 56.000 0.012 NA   NA
 1201509 1201510 PMN2A_0097 PMN2A_0098     TRUE 0.819 17.000 0.012 1.000 N NA
 1201511 1201512 PMN2A_0099 PMN2A_0100     TRUE 0.931 7.000 0.388 NA   NA
 1201512 1201513 PMN2A_0100 PMN2A_0101     FALSE 0.131 110.000 0.095 NA   NA
 1201514 1201515 PMN2A_0102 PMN2A_0103 tesA   TRUE 0.926 26.000 0.264 1.000 N NA
 1201515 1201516 PMN2A_0103 PMN2A_0104     TRUE 0.984 7.000 0.696 1.000 Y NA
 1201516 1201517 PMN2A_0104 PMN2A_0105   phnD TRUE 0.980 -3.000 0.690 1.000 Y NA
 1201517 1201518 PMN2A_0105 PMN2A_0106 phnD aspC TRUE 0.908 6.000 0.238 1.000 N NA
 1201519 1201520 PMN2A_0107 PMN2A_0108     TRUE 0.806 -3.000 0.094 NA   NA
 1201520 1201521 PMN2A_0108 PMN2A_0109   gcpE FALSE 0.644 53.000 0.022 1.000 N NA
 1201523 1201524 PMN2A_0111 PMN2A_0112   nadA FALSE 0.738 9.000 0.003 NA   NA
 1201530 1203160 PMN2A_0118 PMN2A_0119     FALSE 0.012 231.000 0.000 NA   NA
 1294530 1203161         FALSE 0.005 901.000 0.000 NA   NA
 1203161 1203162         FALSE 0.021 169.000 0.000 NA   NA
 1201531 1201532   PMN2A_0120     FALSE 0.005 676.000 0.000 NA   NA
 1201532 1201533 PMN2A_0120 PMN2A_0121     FALSE 0.012 228.000 0.000 NA   NA
 1201533 1201534 PMN2A_0121 PMN2A_0122     FALSE 0.011 247.000 0.000 NA   NA
 1203163 1294518 PMN2A_0123       FALSE 0.015 203.000 0.000 NA   NA
 1294518 1201535   PMN2A_0124     FALSE 0.689 6.000 0.000 NA   NA
 1201535 1201536 PMN2A_0124 PMN2A_0125     FALSE 0.008 340.000 0.000 NA   NA
 1201536 1203165 PMN2A_0125       FALSE 0.005 616.000 0.000 NA   NA
 1203165 1201537   PMN2A_0126     FALSE 0.033 145.000 0.000 NA   NA
 1201538 1203167 PMN2A_0127 PMN2A_0128     FALSE 0.016 194.000 0.000 NA   NA
 1203167 1203168 PMN2A_0128       FALSE 0.118 84.000 0.000 NA   NA
 1203168 1201539   PMN2A_0129     FALSE 0.023 165.000 0.000 NA   NA
 1201540 1201541 PMN2A_0130 PMN2A_0131     FALSE 0.006 461.000 0.000 NA   NA
 1201543 1201544 PMN2A_0134 PMN2A_0135   psb28 TRUE 0.949 10.000 0.488 NA   NA
 1201544 1201545 PMN2A_0135 PMN2A_0136 psb28   TRUE 0.795 42.000 0.077 NA   NA
 1201546 1201547 PMN2A_0137 PMN2A_0138   rsbW FALSE 0.133 131.000 0.194 NA   NA
 1201548 1201549 PMN2A_0139 PMN2A_0140     FALSE 0.764 50.000 0.137 NA   NA
 1201549 1201550 PMN2A_0140 PMN2A_0141   glnA FALSE 0.067 139.000 0.022 1.000 N NA
 1201554 1201555 PMN2A_0145 PMN2A_0146   lspA TRUE 0.895 8.000 0.138 1.000   NA
 1201555 1201556 PMN2A_0146 PMN2A_0147 lspA   TRUE 0.932 -57.000 0.554 NA   NA
 1201558 1201559 PMN2A_0149 PMN2A_0150     TRUE 0.972 3.000 0.352 0.006   NA
 1201560 1201561 PMN2A_0151 PMN2A_0152 pcyA   TRUE 0.924 -6.000 0.455 NA   NA
 1201561 1201562 PMN2A_0152 PMN2A_0153     TRUE 0.947 0.000 0.769 NA N NA
 1201562 1201563 PMN2A_0153 PMN2A_0154     TRUE 0.985 34.000 0.769 1.000 Y NA
 1201563 1201564 PMN2A_0154 PMN2A_0155     TRUE 0.956 37.000 0.800 NA   NA
 1201564 1201565 PMN2A_0155 PMN2A_0156     FALSE 0.283 92.000 0.234 NA   NA
 1201565 1201566 PMN2A_0156 PMN2A_0157   rpsB FALSE 0.026 162.000 0.017 NA N NA
 1201566 1201567 PMN2A_0157 PMN2A_0158 rpsB tsf TRUE 0.845 59.000 0.748 1.000   NA
 1201567 1201568 PMN2A_0158 PMN2A_0159 tsf   FALSE 0.716 3.000 0.008 NA   NA
 1201568 1201569 PMN2A_0159 PMN2A_0160   recG FALSE 0.695 -27.000 0.016 NA   NA
 1201569 1201570 PMN2A_0160 PMN2A_0161 recG ddpX FALSE 0.125 106.000 0.036 1.000 N NA
 1201571 1362577 PMN2A_0162   sir pseudo FALSE 0.105 88.000 0.000 NA   NA
 1201574 1201575 PMN2A_0165 PMN2A_0166   typA FALSE 0.074 133.000 0.011 1.000   NA
 1201575 1201576 PMN2A_0166 PMN2A_0167 typA   FALSE 0.760 6.000 0.019 NA   NA
 1201576 1201577 PMN2A_0167 PMN2A_0168     FALSE 0.024 162.000 0.000 NA   NA
 1201577 1201578 PMN2A_0168 PMN2A_0169     FALSE 0.150 76.000 0.000 NA   NA
 1201578 1201579 PMN2A_0169 PMN2A_0170     TRUE 0.845 7.000 0.026 1.000   NA
 1201579 1201580 PMN2A_0170 PMN2A_0171   ccmC TRUE 0.866 38.000 0.105 1.000   NA
 1201582 1201583 PMN2A_0173 PMN2A_0174 glpX hemA TRUE 0.837 31.000 0.038 1.000 N NA
 1201583 1201584 PMN2A_0174 PMN2A_0284 hemA glgC FALSE 0.125 106.000 0.027 1.000 N NA
 1201584 1201585 PMN2A_0284 PMN2A_0176 glgC gnd FALSE 0.218 159.000 0.042 1.000 Y NA
 1201585 1201586 PMN2A_0176 PMN2A_0177 gnd   TRUE 0.984 6.000 0.046 0.003 Y NA
 1201586 1201587 PMN2A_0177 PMN2A_0178     TRUE 0.923 30.000 0.321 NA   NA
 1201587 1201588 PMN2A_0178 PMN2A_0179     TRUE 0.902 -13.000 0.358 NA   NA
 1201589 1201590 PMN2A_0180 PMN2A_0181 ilvD   TRUE 0.880 34.000 0.165 NA   NA
 1201590 1201591 PMN2A_0181 PMN2A_0182   upp TRUE 0.812 25.000 0.023 NA   NA
 1201592 1201593 PMN2A_0183 PMN2A_0184   cobW TRUE 0.830 21.000 0.033 NA   NA
 1201593 1201594 PMN2A_0184 PMN2A_0186 cobW purS FALSE 0.011 393.000 0.000 1.000   NA
 1201594 1201595 PMN2A_0186 PMN2A_0187 purS   TRUE 0.993 6.000 0.656 0.002 Y NA
 1201596 1201597 PMN2A_0188 PMN2A_0189     FALSE 0.077 142.000 0.042 1.000   NA
 1201597 1203171 PMN2A_0189 PMN2A_0190     FALSE 0.732 22.000 0.000 NA   NA
 1203171 1201598 PMN2A_0190 PMN2A_0191   accD FALSE 0.632 -7.000 0.000 NA   NA
 1201598 1203172 PMN2A_0191 PMN2A_0192 accD   FALSE 0.614 52.000 0.000 1.000   NA
 1203172 1201599 PMN2A_0192 PMN2A_0193   prkB FALSE 0.389 62.000 0.000 1.000   NA
 1201599 1201600 PMN2A_0193 PMN2A_0194 prkB leuB FALSE 0.570 88.000 0.074 1.000 Y NA
 1201600 1201601 PMN2A_0194 PMN2A_0195 leuB lpxD TRUE 0.848 27.000 0.052 1.000 N NA
 1201601 1201602 PMN2A_0195 PMN2A_0196 lpxD proB FALSE 0.748 46.000 0.029 1.000 N NA
 1201602 1203173 PMN2A_0196 PMN2A_0197 proB   FALSE 0.641 -3.000 0.000 NA   NA
 1203173 1201603 PMN2A_0197 PMN2A_0198     FALSE 0.007 396.000 0.000 NA   NA
 1201603 1201604 PMN2A_0198 PMN2A_0199     FALSE 0.363 65.000 0.038 NA   NA
 1201604 1201605 PMN2A_0199 PMN2A_0200     FALSE 0.757 -3.000 0.042 NA   NA
 1201605 1201606 PMN2A_0200 PMN2A_0201     TRUE 0.935 39.000 0.467 NA   NA
 1201606 1201607 PMN2A_0201 PMN2A_0202     FALSE 0.580 58.000 0.111 NA   NA
 1201607 1201608 PMN2A_0202 PMN2A_0203     FALSE 0.443 67.000 0.131 NA   NA
 1201608 1201609 PMN2A_0203 PMN2A_0204   hisA FALSE 0.058 128.000 0.011 NA   NA
 1201613 1201614 PMN2A_0208 PMN2A_0209     TRUE 0.921 22.000 0.256 NA   NA
 1201614 1201615 PMN2A_0209 PMN2A_0210   nth FALSE 0.207 78.000 0.010 1.000 N NA
 1201616 1201617 PMN2A_0211 PMN2A_0212 potA   FALSE 0.030 164.000 0.000 1.000 N NA
 1203174 1201618 PMN2A_0213 PMN2A_0214     TRUE 0.900 7.000 0.235 NA   NA
 1201618 1201619 PMN2A_0214 PMN2A_0215     FALSE 0.015 284.000 0.000 1.000   NA
 1201621 1201622 PMN2A_0217 PMN2A_0218 modF hcaE TRUE 0.967 35.000 0.143 1.000 Y NA
 1201622 1201623 PMN2A_0218 PMN2A_0219 hcaE   FALSE 0.092 193.000 0.400 NA   NA
 1201623 1201624 PMN2A_0219 PMN2A_0220     FALSE 0.054 119.000 0.000 NA   NA
 1309253 1201626 PMN2A_R0003 PMN2A_0222 tRNA-Met ansA FALSE 0.482 53.000 0.000 NA   NA
 1201626 1201627 PMN2A_0222 PMN2A_0223 ansA   TRUE 0.956 4.000 0.810 NA   NA
 1201627 1201628 PMN2A_0223 PMN2A_0224     FALSE 0.753 -7.000 0.033 NA   NA
 1201628 1201629 PMN2A_0224 PMN2A_0225     FALSE 0.724 -7.000 0.021 NA   NA
 1294598 1201630   PMN2A_0226   carB FALSE 0.087 93.000 0.000 NA   NA
 1201630 1201631 PMN2A_0226 PMN2A_0227 carB PNIL34,AT103 FALSE 0.020 223.000 0.000 1.000   NA
 1201632 1201633 PMN2A_0228 PMN2A_0229     TRUE 0.848 8.000 0.098 NA   NA
 1201633 1201634 PMN2A_0229 PMN2A_0230     FALSE 0.016 200.000 0.000 NA   NA
 1201637 1201638 PMN2A_0234 PMN2A_0235     TRUE 0.941 -3.000 0.648 NA   NA
 1201638 1201639 PMN2A_0235 PMN2A_0236     TRUE 0.889 2.000 0.239 NA   NA
 1201642 1203175 PMN2A_0239 PMN2A_0240     FALSE 0.008 328.000 0.000 NA   NA
 1203177 1203178 PMN2A_0242       FALSE 0.048 125.000 0.000 NA   NA
 1201643 1201644 PMN2A_0243 PMN2A_0244     FALSE 0.547 49.000 0.000 NA   NA
 1201646 1201647 PMN2A_0246 PMN2A_0247 amyA   TRUE 0.856 -7.000 0.126 1.000   NA
 1201647 1201648 PMN2A_0247 PMN2A_0248     FALSE 0.773 0.000 0.050 NA   NA
 1201648 1203179 PMN2A_0248 PMN2A_0249     FALSE 0.051 123.000 0.000 NA   NA
 1203179 1201649 PMN2A_0249 PMN2A_0250     FALSE 0.142 153.000 0.375 NA   NA
 1201651 1294531 PMN2A_0252   bacA   FALSE 0.329 59.000 0.000 NA   NA
 1309252 1203180 PMN2A_R0004 PMN2A_0253 tRNA-Pro   FALSE 0.727 14.000 0.000 NA   NA
 1203180 1203181 PMN2A_0253       FALSE 0.615 44.000 0.000 NA   NA
 1203181 1201652   PMN2A_0254     FALSE 0.654 0.000 0.000 NA   NA
 1201652 1201653 PMN2A_0254 PMN2A_0255     TRUE 0.790 5.000 0.038 NA   NA
 1201653 1201654 PMN2A_0255 PMN2A_0256     FALSE 0.276 91.000 0.206 NA   NA
 1201655 1201656 PMN2A_0257 PMN2A_0258     FALSE 0.077 113.000 0.014 NA   NA
 1201656 1201657 PMN2A_0258 PMN2A_0259   carA TRUE 0.961 30.000 0.021 1.000 Y NA
 1201657 1201658 PMN2A_0259 PMN2A_0260 carA   FALSE 0.098 118.000 0.020 1.000 N NA
 1201658 1201659 PMN2A_0260 PMN2A_0261     TRUE 0.854 -3.000 0.113 1.000   NA
 1201659 1201660 PMN2A_0261 PMN2A_0262     TRUE 0.971 18.000 0.150 0.007   NA
 1201660 1201661 PMN2A_0262 PMN2A_0263     FALSE 0.022 227.000 0.031 NA   NA
 1201661 1201662 PMN2A_0263 PMN2A_0264   gatA TRUE 0.795 31.000 0.022 NA   NA
 1201662 1201663 PMN2A_0264 PMN2A_0265 gatA dnaE FALSE 0.270 72.000 0.019 1.000 N NA
 1201664 1201665 PMN2A_0266 PMN2A_0267   rpsO TRUE 0.817 28.000 0.037 NA   NA
 1201665 1201666 PMN2A_0267 PMN2A_0268 rpsO ruvA FALSE 0.669 51.000 0.021 1.000 N NA
 1201666 1201667 PMN2A_0268 PMN2A_0269 ruvA   FALSE 0.708 40.000 0.010 NA   NA
 1201667 1201668 PMN2A_0269 PMN2A_0270     TRUE 0.820 -3.000 0.113 NA   NA
 1201669 1203182 PMN2A_0271 PMN2A_0272 dnaG   FALSE 0.734 20.000 0.000 NA   NA
 1201670 1201671 PMN2A_0273 PMN2A_0274   umuC TRUE 0.821 51.000 0.267 NA   NA
 1201671 1201672 PMN2A_0274 PMN2A_0275 umuC umuD TRUE 0.951 3.000 0.625 1.000 N NA
 1201672 1201673 PMN2A_0275 PMN2A_0276 umuD   FALSE 0.324 63.000 0.011 NA   NA
 1201673 1201674 PMN2A_0276 PMN2A_0277     FALSE 0.690 -13.000 0.012 NA   NA
 1201675 1201676 PMN2A_0562 PMN2A_0279 ksgA ispE FALSE 0.742 -22.000 0.016 1.000 N NA
 1201676 1208634 PMN2A_0279 PMN2A_0280 ispE   TRUE 0.929 -13.000 0.488 NA   NA
 1208634 1201677 PMN2A_0280       FALSE 0.693 35.000 0.000 NA   NA
 1201677 1201678   PMN2A_0281   pdhB FALSE 0.272 63.000 0.000 NA   NA
 1201678 1201679 PMN2A_0281 PMN2A_0282 pdhB secD TRUE 0.846 3.000 0.091 1.000 N NA
 1201679 1201680 PMN2A_0282 PMN2A_0283 secD secF TRUE 0.994 25.000 0.516 0.001 Y NA
 1203183 1203184 PMN2A_0286       FALSE 0.699 34.000 0.000 NA   NA
 1201682 1294523 PMN2A_0288       FALSE 0.010 261.000 0.000 NA   NA
 1201686 1201687 PMN2A_0293 PMN2A_0294   salY FALSE 0.151 141.000 0.282 1.000 N NA
 1201687 1201688 PMN2A_0294 PMN2A_0295 salY pykF TRUE 0.948 7.000 0.476 1.000 N NA
 1201690 1201691 PMN2A_0297 PMN2A_0298     TRUE 0.867 25.000 0.029 1.000   NA
 1201691 1201692 PMN2A_0298 PMN2A_0299   ilvA FALSE 0.572 57.000 0.028 1.000 N NA
 1201694 1201695 PMN2A_0301 PMN2A_0302 psaK   FALSE 0.543 71.000 0.357 NA   NA
 1201695 1201696 PMN2A_0302 PMN2A_0303     TRUE 0.940 -3.000 0.625 NA   NA
 1201696 1201697 PMN2A_0303 PMN2A_0304     TRUE 0.852 -7.000 0.180 NA   NA
 1201698 1201699 PMN2A_0305 PMN2A_0306 rpmB htpG FALSE 0.712 46.000 0.019 1.000 N NA
 1201699 1201700 PMN2A_0306 PMN2A_0307 htpG hisZ FALSE 0.064 131.000 0.008 1.000 N NA
 1201700 1201701 PMN2A_0307 PMN2A_0308 hisZ suhB TRUE 0.784 43.000 0.032 1.000 N NA
 1201702 1201703 PMN2A_0309 PMN2A_0310 pstB pstA TRUE 0.994 32.000 0.952 0.003 Y NA
 1201703 1201704 PMN2A_0310 PMN2A_0311 pstA pstC TRUE 0.991 1.000 0.541 0.003 Y NA
 1201705 1201706 PMN2A_0312 PMN2A_0313   dnaJ2 TRUE 0.988 -16.000 0.488 0.007 Y NA
 1201706 1201707 PMN2A_0313 PMN2A_0314 dnaJ2   TRUE 0.828 57.000 0.488 NA   NA
 1201707 1201708 PMN2A_0314 PMN2A_0315     TRUE 0.940 -3.000 0.634 NA   NA
 1201708 1201709 PMN2A_0315 PMN2A_0316     FALSE 0.194 90.000 0.022 1.000   NA
 1201715 1201716 PMN2A_0322 PMN2A_0323 dapF   TRUE 0.962 12.000 0.021 1.000 Y NA
 1201716 1201717 PMN2A_0323 PMN2A_0324     TRUE 0.924 11.000 0.324 NA   NA
 1201717 1201718 PMN2A_0324 PMN2A_0325   dacB TRUE 0.883 5.000 0.195 NA   NA
 1201720 1201721 PMN2A_0327 PMN2A_0328   uvrC TRUE 0.845 19.000 0.015 1.000   NA
 1201721 1201722 PMN2A_0328 PMN2A_0329 uvrC   FALSE 0.106 93.000 0.008 NA   NA
 1201722 1201723 PMN2A_0329 PMN2A_0330     FALSE 0.747 -30.000 0.044 NA   NA
 1201725 1201726 PMN2A_0332 PMN2A_0333 ilvE metH TRUE 0.783 64.000 0.036 1.000 Y NA
 1201727 1294505 PMN2A_0334       FALSE 0.054 119.000 0.000 NA   NA
 1201731 1201732 PMN2A_0339 PMN2A_0340 rpmG rpsR TRUE 0.955 26.000 0.037 0.026   NA
 1201732 1201733 PMN2A_0340 PMN2A_0341 rpsR   TRUE 0.851 33.000 0.027 1.000   NA
 1201733 1201734 PMN2A_0341 PMN2A_0342   metG FALSE 0.343 68.000 0.013 1.000   NA
 1201734 1203189 PMN2A_0342 PMN2A_0343 metG   FALSE 0.715 0.000 0.013 NA   NA
 1201736 1201737 PMN2A_0345 PMN2A_0346 cobU cspR FALSE 0.739 -3.000 0.009 1.000 N NA
 1294573 1294545   PMN2A_0347     FALSE 0.005 659.000 0.000 NA   NA
 1203193 1201738 PMN2A_0348       FALSE 0.005 783.000 0.000 NA   NA
 1201738 1203194         FALSE 0.006 490.000 0.000 NA   NA
 1201739 1203195 PMN2A_0349       FALSE 0.733 16.000 0.000 NA   NA
 1203195 1201740   PMN2A_0350     FALSE 0.035 140.000 0.000 NA   NA
 1201740 1294509 PMN2A_0350       FALSE 0.157 75.000 0.000 NA   NA
 1294509 1309219   PMN2A_R0006   tRNA-Met FALSE 0.005 592.000 0.000 NA   NA
 1203198 1201744 PMN2A_0355 PMN2A_0356     FALSE 0.779 2.000 0.035 NA   NA
 1201747 1201748 PMN2A_0358 PMN2A_0359     TRUE 0.946 17.000 0.000 0.069   NA
 1201748 1201749 PMN2A_0359 PMN2A_0360   vacB FALSE 0.521 83.000 0.439 1.000   NA
 1201749 1201750 PMN2A_0360 PMN2A_0361 vacB ubiX TRUE 0.883 1.000 0.188 1.000 N NA
 1201750 1201751 PMN2A_0361 PMN2A_0362 ubiX   FALSE 0.641 -3.000 0.000 NA   NA
 1201751 1201752 PMN2A_0362 PMN2A_0363     FALSE 0.163 74.000 0.000 NA   NA
 1201752 1201753 PMN2A_0363 PMN2A_0364   tldD FALSE 0.025 170.000 0.005 NA   NA
 1201753 1201754 PMN2A_0364 PMN2A_0365 tldD pmbA TRUE 0.855 2.000 0.146 NA   NA
 1201754 1201755 PMN2A_0365 PMN2A_0366 pmbA fmt FALSE 0.715 -3.000 0.018 NA   NA
 1201757 1201758 PMN2A_0368 PMN2A_0369   mfd FALSE 0.289 64.000 0.003 NA   NA
 1201758 1201759 PMN2A_0369 PMN2A_0370 mfd   FALSE 0.583 46.000 0.000 NA   NA
 1201760 1201761 PMN2A_0371 PMN2A_0372     FALSE 0.462 54.000 0.000 NA   NA
 1201761 1201762 PMN2A_0372 PMN2A_0373     FALSE 0.048 125.000 0.000 NA   NA
 1201762 1201763 PMN2A_0373 PMN2A_0374     TRUE 0.926 10.000 0.343 NA   NA
 1362578 1201765 PMN2A_0376 PMN2A_0377 pseudo ubiH FALSE 0.735 18.000 0.000 NA   NA
 1201765 1201766 PMN2A_0377 PMN2A_0378 ubiH   TRUE 0.893 34.000 0.200 NA   NA
 1201766 1201767 PMN2A_0378 PMN2A_0379   dapB TRUE 0.819 13.000 0.027 NA   NA
 1201769 1201770 PMN2A_0381 PMN2A_0382 folP tpi TRUE 0.796 41.000 0.039 1.000 N NA
 1201770 1201771 PMN2A_0382 PMN2A_0383 tpi   TRUE 0.794 10.000 0.000 1.000   NA
 1201772 1201773 PMN2A_0384 PMN2A_0385     FALSE 0.643 42.000 0.000 NA   NA
 1201773 1201774 PMN2A_0385 PMN2A_0386     FALSE 0.030 148.000 0.000 NA   NA
 1201774 1201775 PMN2A_0386 PMN2A_0387     FALSE 0.651 41.000 0.000 NA   NA
 1201775 1203200 PMN2A_0387 PMN2A_0388     FALSE 0.009 303.000 0.000 NA   NA
 1201776 1201777         FALSE 0.009 286.000 0.000 NA   NA
 1201780 1203202         FALSE 0.732 22.000 0.000 NA   NA
 1294562 1203204         FALSE 0.068 102.000 0.000 NA   NA
 1203205 1201781 PMN2A_0392 PMN2A_0393     FALSE 0.063 106.000 0.000 NA   NA
 1201781 1203206 PMN2A_0393       FALSE 0.017 191.000 0.000 NA   NA
 1203206 1201782   PMN2A_0394     FALSE 0.112 86.000 0.000 NA   NA
 1201782 1201783 PMN2A_0394 PMN2A_0395     FALSE 0.085 104.000 0.000 1.000 N NA
 1203207 1203208 PMN2A_0397 PMN2A_0398     FALSE 0.314 60.000 0.000 NA   NA
 1203208 1201785 PMN2A_0398 PMN2A_0399     FALSE 0.008 327.000 0.000 NA   NA
 1201787 1203212 PMN2A_0403 PMN2A_0404     FALSE 0.071 100.000 0.000 NA   NA
 1203212 1203213 PMN2A_0404 PMN2A_0405     FALSE 0.482 53.000 0.000 NA   NA
 1203213 1203214 PMN2A_0405 PMN2A_0406     FALSE 0.353 58.000 0.000 NA   NA
 1203214 1294593 PMN2A_0406       FALSE 0.097 90.000 0.000 NA   NA
 1294593 1201788   PMN2A_0407     FALSE 0.734 20.000 0.000 NA   NA
 1294543 1201789 PMN2A_0408 PMN2A_0409     FALSE 0.651 41.000 0.000 NA   NA
 1201789 1203215 PMN2A_0409       FALSE 0.038 137.000 0.000 NA   NA
 1201790 1203216 PMN2A_0410       FALSE 0.010 264.000 0.000 NA   NA
 1203217 1201791   PMN2A_0411     FALSE 0.006 537.000 0.000 NA   NA
 1201791 1362579 PMN2A_0411 PMN2A_0412   pseudo FALSE 0.005 640.000 0.000 NA   NA
 1362579 1203219 PMN2A_0412   pseudo   FALSE 0.027 157.000 0.000 NA   NA
 1203219 1201792   PMN2A_0413     FALSE 0.038 136.000 0.000 NA   NA
 1203220 1203221   PMN2A_0414     FALSE 0.011 253.000 0.000 NA   NA
 1203221 1203222 PMN2A_0414 PMN2A_0415     FALSE 0.212 68.000 0.000 NA   NA
 1203222 1201793 PMN2A_0415 PMN2A_0416     FALSE 0.712 30.000 0.000 NA   NA
 1201794 1201795 PMN2A_0417 PMN2A_0418     FALSE 0.654 0.000 0.000 NA   NA
 1201795 1201796 PMN2A_0418 PMN2A_0419     FALSE 0.654 0.000 0.000 NA   NA
 1201796 1203223 PMN2A_0419       FALSE 0.654 0.000 0.000 NA   NA
 1203223 1201797   PMN2A_0420     FALSE 0.693 35.000 0.000 NA   NA
 1201797 1201798 PMN2A_0420 PMN2A_0421     FALSE 0.010 256.000 0.000 NA   NA
 1201798 1201799 PMN2A_0421 PMN2A_0422     FALSE 0.105 88.000 0.000 NA   NA
 1201799 1201800 PMN2A_0422 PMN2A_0423     FALSE 0.630 -12.000 0.000 NA   NA
 1201801 1203224 PMN2A_0424       FALSE 0.628 -21.000 0.000 NA   NA
 1203224 1203225   PMN2A_0425     FALSE 0.058 114.000 0.000 NA   NA
 1201802 1203227 PMN2A_0426       FALSE 0.012 226.000 0.000 NA   NA
 1203228 1203229         FALSE 0.699 34.000 0.000 NA   NA
 1203229 1203230         FALSE 0.135 79.000 0.000 NA   NA
 1203231 1362580 PMN2A_0427     pseudo FALSE 0.682 5.000 0.000 NA   NA
 1362580 1201803   PMN2A_0428 pseudo   FALSE 0.200 69.000 0.000 NA   NA
 1201804 1201805 PMN2A_0429 PMN2A_0430     FALSE 0.054 119.000 0.000 NA   NA
 1294596 1201806 PMN2A_0431 PMN2A_0432     FALSE 0.009 291.000 0.000 NA   NA
 1201806 1203232 PMN2A_0432       FALSE 0.068 102.000 0.000 NA   NA
 1201807 1201808 PMN2A_0433 PMN2A_0434     FALSE 0.704 9.000 0.000 NA   NA
 1294554 1203234         FALSE 0.672 3.000 0.000 NA   NA
 1203234 1203235         FALSE 0.061 109.000 0.000 NA   NA
 1203236 1203237         FALSE 0.105 88.000 0.000 NA   NA
 1201809 1201810 PMN2A_0435 PMN2A_0436 crp phoB FALSE 0.728 87.000 0.020 0.021 Y NA
 1201810 1201811 PMN2A_0436 PMN2A_0437 phoB phoR TRUE 0.967 10.000 0.099 1.000 Y NA
 1201812 1201813 PMN2A_0438 PMN2A_0439     TRUE 0.954 35.000 0.667 NA   NA
 1201813 1201814 PMN2A_0439 PMN2A_0440     FALSE 0.037 162.000 0.000 1.000   NA
 1201815 1203238 PMN2A_0441       FALSE 0.065 105.000 0.000 NA   NA
 1203238 1203239   PMN2A_0442     FALSE 0.070 101.000 0.000 NA   NA
 1201816 1201817 PMN2A_0443 PMN2A_0444 chrA   FALSE 0.641 52.000 0.030 NA   NA
 1201817 1201818 PMN2A_0444 PMN2A_0445   gap3 TRUE 0.959 11.000 0.689 NA   NA
 1201819 1201820 PMN2A_0446 PMN2A_0447 arsR   FALSE 0.036 153.000 0.000 1.000 N NA
 1201820 1201821 PMN2A_0447       FALSE 0.017 191.000 0.000 NA   NA
 1201821 1201822   PMN2A_0448     FALSE 0.440 55.000 0.000 NA   NA
 1201822 1201823 PMN2A_0448 PMN2A_0449     FALSE 0.006 481.000 0.000 NA   NA
 1201823 1201824 PMN2A_0449 PMN2A_0450     FALSE 0.007 368.000 0.000 NA   NA
 1201824 1294552 PMN2A_0450 PMN2A_0451     FALSE 0.729 24.000 0.000 NA   NA
 1294552 1201825 PMN2A_0451 PMN2A_0452     FALSE 0.672 3.000 0.000 NA   NA
 1201825 1201826 PMN2A_0452 PMN2A_0453     FALSE 0.135 79.000 0.000 NA   NA
 1203242 1203243         FALSE 0.013 225.000 0.000 NA   NA
 1203243 1203244         FALSE 0.629 -16.000 0.000 NA   NA
 1201828 1203245 PMN2A_0455       FALSE 0.079 96.000 0.000 NA   NA
 1203245 1203246         FALSE 0.051 123.000 0.000 NA   NA
 1203247 1201829   PMN2A_0456     FALSE 0.060 110.000 0.000 NA   NA
 1201829 1201830 PMN2A_0456 PMN2A_0457     FALSE 0.005 718.000 0.000 NA   NA
 1201830 1294538 PMN2A_0457 PMN2A_0458     TRUE 0.959 1.000 1.000 NA   NA
 1294538 1201831 PMN2A_0458       FALSE 0.699 34.000 0.000 NA   NA
 1201831 1201832   PMN2A_0459     FALSE 0.044 130.000 0.000 NA   NA
 1201832 1201833 PMN2A_0459 PMN2A_0460     FALSE 0.182 71.000 0.000 NA   NA
 1201833 1201834 PMN2A_0460 PMN2A_0461     FALSE 0.105 88.000 0.000 NA   NA
 1201834 1201835 PMN2A_0461 PMN2A_0462     FALSE 0.084 94.000 0.000 NA   NA
 1201835 1203248 PMN2A_0462 PMN2A_0463     FALSE 0.733 16.000 0.000 NA   NA
 1203249 1203250   PMN2A_0465     FALSE 0.654 0.000 0.000 NA   NA
 1203251 1203252 PMN2A_0466       FALSE 0.255 64.000 0.000 NA   NA
 1294558 1203254         FALSE 0.627 -48.000 0.000 NA   NA
 1203254 1203255   PMN2A_0468     FALSE 0.015 205.000 0.000 NA   NA
 1203255 1203256 PMN2A_0468 PMN2A_0469     FALSE 0.169 73.000 0.000 NA   NA
 1201838 1201839 PMN2A_0470 PMN2A_0471     FALSE 0.009 287.000 0.000 NA   NA
 1201840 1201841 PMN2A_0472 PMN2A_0473     FALSE 0.387 57.000 0.000 NA   NA
 1201844 1201845 PMN2A_0476 PMN2A_0477     FALSE 0.005 753.000 0.000 NA   NA
 1203257 1201846   PMN2A_0478     FALSE 0.025 160.000 0.000 NA   NA
 1201846 1203258 PMN2A_0478 PMN2A_0479     FALSE 0.255 64.000 0.000 NA   NA
 1203258 1203260 PMN2A_0479 PMN2A_0480     FALSE 0.010 263.000 0.000 NA   NA
 1203260 1203261 PMN2A_0480       FALSE 0.662 1.000 0.000 NA   NA
 1203261 1203262   PMN2A_0481     FALSE 0.314 60.000 0.000 NA   NA
 1203262 1201847 PMN2A_0481 PMN2A_0482     FALSE 0.706 32.000 0.000 NA   NA
 1201847 1203263 PMN2A_0482 PMN2A_0483     FALSE 0.128 81.000 0.000 NA   NA
 1203263 1203264 PMN2A_0483       FALSE 0.501 52.000 0.000 NA   NA
 1203264 1201848   PMN2A_0484     FALSE 0.037 138.000 0.000 NA   NA
 1201852 1201853 PMN2A_0488 PMN2A_0489     FALSE 0.120 96.000 0.000 1.000   NA
 1201853 1294490 PMN2A_0489 PMN2A_0490     FALSE 0.630 43.000 0.000 NA   NA
 1294490 1203265 PMN2A_0490       FALSE 0.547 49.000 0.000 NA   NA
 1203265 1201854   PMN2A_0491     FALSE 0.014 215.000 0.000 NA   NA
 1201854 1201855 PMN2A_0491 PMN2A_0492     FALSE 0.015 206.000 0.000 NA   NA
 1201855 1201856 PMN2A_0492 PMN2A_0493     FALSE 0.076 97.000 0.000 NA   NA
 1201856 1203266 PMN2A_0493       FALSE 0.272 63.000 0.000 NA   NA
 1203267 1201857   PMN2A_0495     FALSE 0.662 1.000 0.000 NA   NA
 1201857 1203268 PMN2A_0495       FALSE 0.689 6.000 0.000 NA   NA
 1203268 1203269         FALSE 0.025 161.000 0.000 NA   NA
 1203270 1201858   PMN2A_0496     FALSE 0.076 97.000 0.000 NA   NA
 1203271 1201859   PMN2A_0497     FALSE 0.128 81.000 0.000 NA   NA
 1201859 1201860 PMN2A_0497 PMN2A_0498     FALSE 0.010 262.000 0.000 NA   NA
 1201860 1203272 PMN2A_0498 PMN2A_0499     FALSE 0.030 149.000 0.000 NA   NA
 1203272 1203273 PMN2A_0499 PMN2A_0500     FALSE 0.007 418.000 0.000 NA   NA
 1203273 1203274 PMN2A_0500 PMN2A_0501     FALSE 0.699 34.000 0.000 NA   NA
 1203274 1203275 PMN2A_0501 PMN2A_0502     FALSE 0.005 650.000 0.000 NA   NA
 1203275 1201861 PMN2A_0502 PMN2A_0503   purT FALSE 0.632 -7.000 0.000 NA   NA
 1201861 1203276 PMN2A_0503 PMN2A_0504 purT   FALSE 0.007 368.000 0.000 NA   NA
 1203277 1201862   PMN2A_0505     FALSE 0.033 144.000 0.000 NA   NA
 1201862 1203278 PMN2A_0505 PMN2A_0506     FALSE 0.057 115.000 0.000 NA   NA
 1201863 1201864 PMN2A_0507 PMN2A_0508     FALSE 0.654 0.000 0.000 NA   NA
 1201864 1203279 PMN2A_0508       FALSE 0.654 0.000 0.000 NA   NA
 1201865 1201866 PMN2A_0509 PMN2A_0510     FALSE 0.041 132.000 0.000 NA   NA
 1201866 1201867 PMN2A_0510 PMN2A_0511     FALSE 0.699 34.000 0.000 NA   NA
 1201867 1201868 PMN2A_0511 PMN2A_0512     FALSE 0.701 8.000 0.000 NA   NA
 1201869 1203280 PMN2A_0513       FALSE 0.583 46.000 0.000 NA   NA
 1203280 1201870   PMN2A_0514     FALSE 0.583 46.000 0.000 NA   NA
 1201872 1294488 PMN2A_0516       FALSE 0.630 43.000 0.000 NA   NA
 1294488 1203281         FALSE 0.082 95.000 0.000 NA   NA
 1203281 1203282         FALSE 0.701 8.000 0.000 NA   NA
 1201873 1201874   PMN2A_0517     FALSE 0.019 177.000 0.000 NA   NA
 1201874 1201875 PMN2A_0517 PMN2A_0518     FALSE 0.034 142.000 0.000 NA   NA
 1201875 1201876 PMN2A_0518 PMN2A_0519     FALSE 0.005 582.000 0.000 NA   NA
 1201876 1203283 PMN2A_0519 PMN2A_0520     FALSE 0.031 147.000 0.000 NA   NA
 1203283 1294600 PMN2A_0520       FALSE 0.632 -7.000 0.000 NA   NA
 1294600 1294582         FALSE 0.627 -43.000 0.000 NA   NA
 1203284 1201877 PMN2A_0521 PMN2A_0522     FALSE 0.018 184.000 0.000 NA   NA
 1203285 1294512         FALSE 0.034 142.000 0.000 NA   NA
 1203286 1201878   PMN2A_0523     FALSE 0.038 136.000 0.000 NA   NA
 1203287 1362581 PMN2A_0524     pseudo FALSE 0.054 119.000 0.000 NA   NA
 1362581 1203288   PMN2A_0525 pseudo   FALSE 0.006 499.000 0.000 NA   NA
 1203289 1203290 PMN2A_0526 PMN2A_0527     FALSE 0.672 3.000 0.000 NA   NA
 1201879 1203291 PMN2A_0529 PMN2A_0530     FALSE 0.100 89.000 0.000 NA   NA
 1362582 1203292     pseudo   FALSE 0.020 176.000 0.000 NA   NA
 1203292 1201880   PMN2A_0531     FALSE 0.721 27.000 0.000 NA   NA
 1201881 1203293 PMN2A_0532 PMN2A_0533     FALSE 0.416 56.000 0.000 NA   NA
 1203293 1203294 PMN2A_0533       FALSE 0.632 -7.000 0.000 NA   NA
 1203294 1203295         FALSE 0.654 0.000 0.000 NA   NA
 1201882 1201883 PMN2A_0534 PMN2A_0535     FALSE 0.060 111.000 0.000 NA   NA
 1201883 1309220 PMN2A_0535 PMN2A_R0007   tRNA-Gly FALSE 0.235 66.000 0.000 NA   NA
 1309220 1201884 PMN2A_R0007 PMN2A_0536 tRNA-Gly   FALSE 0.065 105.000 0.000 NA   NA
 1201884 1362583 PMN2A_0536     pseudo FALSE 0.012 234.000 0.000 NA   NA
 1362583 1203296   PMN2A_0537 pseudo   FALSE 0.682 5.000 0.000 NA   NA
 1203296 1201885 PMN2A_0537 PMN2A_0538     FALSE 0.014 213.000 0.000 NA   NA
 1203298 1203299         FALSE 0.641 -3.000 0.000 NA   NA
 1294496 1203300 PMN2A_0539       FALSE 0.017 188.000 0.000 NA   NA
 1203301 1201887   PMN2A_0540     FALSE 0.013 217.000 0.000 NA   NA
 1201887 1203302 PMN2A_0540       FALSE 0.626 -85.000 0.000 NA   NA
 1203302 1201888   PMN2A_0541     FALSE 0.688 36.000 0.000 NA   NA
 1294577 1203303         FALSE 0.032 146.000 0.000 NA   NA
 1201889 1203306 PMN2A_0543       FALSE 0.015 202.000 0.000 NA   NA
 1203308 1201891   PMN2A_0545     FALSE 0.052 122.000 0.000 NA   NA
 1201891 1294541 PMN2A_0545       FALSE 0.032 146.000 0.000 NA   NA
 1201892 1203310 PMN2A_0546       FALSE 0.011 244.000 0.000 NA   NA
 1203310 1203311         FALSE 0.006 471.000 0.000 NA   NA
 1203311 1294493         FALSE 0.007 400.000 0.000 NA   NA
 1203312 1294508 PMN2A_0547       FALSE 0.182 71.000 0.000 NA   NA
 1294508 1203313         FALSE 0.054 119.000 0.000 NA   NA
 1203313 1201893   PMN2A_0548     FALSE 0.059 112.000 0.000 NA   NA
 1201893 1362584 PMN2A_0548     pseudo FALSE 0.021 170.000 0.000 NA   NA
 1362584 1203314   PMN2A_0549 pseudo   FALSE 0.023 164.000 0.000 NA   NA
 1201894 1203315   PMN2A_0550     FALSE 0.112 86.000 0.000 NA   NA
 1201895 1201896 PMN2A_0551 PMN2A_0552     FALSE 0.654 0.000 0.000 NA   NA
 1201896 1203316 PMN2A_0552       FALSE 0.654 0.000 0.000 NA   NA
 1201898 1201899 PMN2A_0554 PMN2A_0555     FALSE 0.011 248.000 0.000 NA   NA
 1201899 1201900 PMN2A_0555 PMN2A_0556     FALSE 0.005 604.000 0.000 NA   NA
 1201900 1201901 PMN2A_0556 PMN2A_0557     FALSE 0.709 10.000 0.000 NA   NA
 1201902 1201903 PMN2A_0558 PMN2A_0559     FALSE 0.023 206.000 0.000 1.000   NA
 1201903 1201904 PMN2A_0559 PMN2A_0560   nei FALSE 0.092 110.000 0.000 1.000   NA
 1201905 1201906 PMN2A_0561 PMN2A_0563     FALSE 0.006 529.000 0.000 NA   NA
 1201906 1203319 PMN2A_0563       FALSE 0.562 48.000 0.000 NA   NA
 1203319 1201907   PMN2A_0564     FALSE 0.600 45.000 0.000 NA   NA
 1201907 1203320 PMN2A_0564 PMN2A_0565     FALSE 0.036 139.000 0.000 NA   NA
 1201908 1203322 PMN2A_0567 PMN2A_0568     FALSE 0.353 58.000 0.000 NA   NA
 1203322 1362585 PMN2A_0568 PMN2A_0569   pseudo FALSE 0.020 171.000 0.000 NA   NA
 1362585 1203324 PMN2A_0569   pseudo   FALSE 0.019 177.000 0.000 NA   NA
 1203324 1201909   PMN2A_0570     FALSE 0.010 258.000 0.000 NA   NA
 1201909 1294489 PMN2A_0570       FALSE 0.079 96.000 0.000 NA   NA
 1294489 1201910   PMN2A_0571     FALSE 0.038 136.000 0.000 NA   NA
 1201910 1362586 PMN2A_0571     pseudo FALSE 0.023 165.000 0.000 NA   NA
 1362586 1203325     pseudo   FALSE 0.011 246.000 0.000 NA   NA
 1203326 1203327 PMN2A_0573       FALSE 0.008 342.000 0.000 NA   NA
 1203327 1294474         FALSE 0.462 54.000 0.000 NA   NA
 1203328 1203329   PMN2A_0574     FALSE 0.709 10.000 0.000 NA   NA
 1201912 1201913   PMN2A_0575     FALSE 0.006 426.000 0.000 NA   NA
 1294540 1201914         FALSE 0.629 -13.000 0.000 NA   NA
 1201914 1203330         FALSE 0.704 9.000 0.000 NA   NA
 1201916 1201917 PMN2A_0551 PMN2A_0577     FALSE 0.654 0.000 0.000 NA   NA
 1201917 1203331 PMN2A_0577       FALSE 0.654 0.000 0.000 NA   NA
 1203333 1201919 PMN2A_0579 PMN2A_0580     FALSE 0.641 -3.000 0.000 NA   NA
 1201919 1294510 PMN2A_0580       FALSE 0.006 521.000 0.000 NA   NA
 1294561 1203334   PMN2A_0581     FALSE 0.027 155.000 0.000 NA   NA
 1203334 1201920 PMN2A_0581 PMN2A_0582     FALSE 0.013 217.000 0.000 NA   NA
 1201920 1203335 PMN2A_0582       FALSE 0.027 157.000 0.000 NA   NA
 1294539 1362588 PMN2A_0583     pseudo FALSE 0.005 575.000 0.000 NA   NA
 1362588 1203337   PMN2A_0584 pseudo   FALSE 0.018 187.000 0.000 NA   NA
 1203337 1203338 PMN2A_0584       FALSE 0.662 1.000 0.000 NA   NA
 1201921 1201922 PMN2A_0585 PMN2A_0586     FALSE 0.029 150.000 0.000 NA   NA
 1201922 1201923 PMN2A_0586 PMN2A_0587     FALSE 0.299 61.000 0.000 NA   NA
 1203340 1294528 PMN2A_0589       FALSE 0.006 444.000 0.000 NA   NA
 1294528 1203341         FALSE 0.014 209.000 0.000 NA   NA
 1203341 1201925   PMN2A_0590     FALSE 0.641 -3.000 0.000 NA   NA
 1201925 1203342 PMN2A_0590       FALSE 0.387 57.000 0.000 NA   NA
 1203346 1362589 PMN2A_0592     pseudo FALSE 0.013 225.000 0.000 NA   NA
 1294536 1294498   PMN2A_0593     FALSE 0.632 -7.000 0.000 NA   NA
 1294498 1201927 PMN2A_0593 PMN2A_0594     FALSE 0.025 160.000 0.000 NA   NA
 1201927 1294492 PMN2A_0594       FALSE 0.010 269.000 0.000 NA   NA
 1294492 1203347         FALSE 0.626 -115.000 0.000 NA   NA
 1294586 1294590         FALSE 0.627 -40.000 0.000 NA   NA
 1294590 1203348         FALSE 0.672 3.000 0.000 NA   NA
 1294522 1203349         FALSE 0.046 127.000 0.000 NA   NA
 1203349 1201928   PMN2A_0595     FALSE 0.015 202.000 0.000 NA   NA
 1201928 1294599 PMN2A_0595       FALSE 0.633 -6.000 0.000 NA   NA
 1294601 1294597 PMN2A_0596       FALSE 0.082 95.000 0.000 NA   NA
 1294597 1201929   PMN2A_0597     FALSE 0.190 70.000 0.000 NA   NA
 1201929 1294477 PMN2A_0597 PMN2A_0598     FALSE 0.007 387.000 0.000 NA   NA
 1294477 1201930 PMN2A_0598 PMN2A_0599     FALSE 0.009 303.000 0.000 NA   NA
 1201930 1201931 PMN2A_0599 PMN2A_0600     FALSE 0.440 55.000 0.000 NA   NA
 1201931 1203350 PMN2A_0600       FALSE 0.135 79.000 0.000 NA   NA
 1203350 1203351         FALSE 0.082 95.000 0.000 NA   NA
 1203351 1362590       pseudo FALSE 0.048 125.000 0.000 NA   NA
 1362590 1294612     pseudo   FALSE 0.035 140.000 0.000 NA   NA
 1294612 1203352         FALSE 0.626 -85.000 0.000 NA   NA
 1203352 1201932   PMN2A_0601   rsuA FALSE 0.016 192.000 0.000 NA   NA
 1201933 1201934 PMN2A_0602 PMN2A_1717     FALSE 0.654 0.000 0.000 NA   NA
 1201934 1294521 PMN2A_1717       FALSE 0.654 0.000 0.000 NA   NA
 1294521 1201935   PMN2A_0604     FALSE 0.733 21.000 0.000 NA   NA
 1201935 1203353 PMN2A_0604       FALSE 0.017 188.000 0.000 NA   NA
 1203353 1203354   PMN2A_0605     FALSE 0.071 100.000 0.000 NA   NA
 1203354 1201936 PMN2A_0605 PMN2A_0606     FALSE 0.019 182.000 0.000 NA   NA
 1201936 1201937 PMN2A_0606 PMN2A_0607     FALSE 0.009 297.000 0.000 NA   NA
 1201937 1203355 PMN2A_0607 PMN2A_0608     FALSE 0.035 141.000 0.000 NA   NA
 1203355 1203356 PMN2A_0608       FALSE 0.709 10.000 0.000 NA   NA
 1203356 1203357   PMN2A_0609     FALSE 0.667 2.000 0.000 NA   NA
 1201939 1201940 PMN2A_0611 PMN2A_0612 glnQ   TRUE 0.978 7.000 0.382 1.000 Y NA
 1201940 1201941 PMN2A_0612 PMN2A_0613     TRUE 0.988 4.000 0.356 0.008 Y NA
 1201941 1201942 PMN2A_0613 PMN2A_0614     TRUE 0.992 19.000 0.424 0.015 Y NA
 1203360 1201943   PMN2A_0615     FALSE 0.654 0.000 0.000 NA   NA
 1201943 1201944 PMN2A_0615 PMN2A_0616     FALSE 0.010 259.000 0.000 NA   NA
 1201944 1201945 PMN2A_0616 PMN2A_0617     FALSE 0.682 5.000 0.000 NA   NA
 1201946 1201947 PMN2A_0618 PMN2A_0619     FALSE 0.020 176.000 0.000 NA   NA
 1201947 1201948 PMN2A_0619 PMN2A_0620     FALSE 0.733 16.000 0.000 NA   NA
 1201948 1203362 PMN2A_0620       FALSE 0.682 5.000 0.000 NA   NA
 1203362 1294571         FALSE 0.007 378.000 0.000 NA   NA
 1201949 1201950 PMN2A_0621 PMN2A_0622 hupE   FALSE 0.005 558.000 0.000 NA   NA
 1201950 1309251 PMN2A_0622 PMN2A_R0008   tRNA-Pro FALSE 0.006 432.000 0.000 NA   NA
 1203363 1203364   PMN2A_0623     FALSE 0.005 556.000 0.000 NA   NA
 1203364 1201951 PMN2A_0623       FALSE 0.721 27.000 0.000 NA   NA
 1201951 1201952   PMN2A_0624     FALSE 0.007 371.000 0.000 NA   NA
 1203367 1203368 PMN2A_0627       FALSE 0.387 57.000 0.000 NA   NA
 1203368 1294585   PMN2A_0628     FALSE 0.018 184.000 0.000 NA   NA
 1294585 1201953 PMN2A_0628 PMN2A_0629     FALSE 0.016 192.000 0.000 NA   NA
 1201953 1201954 PMN2A_0629 PMN2A_0630     FALSE 0.065 105.000 0.000 NA   NA
 1201955 1203370 PMN2A_0631       FALSE 0.562 48.000 0.000 NA   NA
 1203370 1201956   PMN2A_0632     FALSE 0.062 107.000 0.000 NA   NA
 1201956 1201957 PMN2A_0632 PMN2A_0633     TRUE 0.948 37.000 0.600 NA   NA
 1201957 1201958 PMN2A_0633 PMN2A_0634     FALSE 0.006 442.000 0.000 NA   NA
 1201958 1309250 PMN2A_0634 PMN2A_R0009   tRNA-Lys FALSE 0.703 33.000 0.000 NA   NA
 1362591 1201959   PMN2A_0635 pseudo gid FALSE 0.462 54.000 0.000 NA   NA
 1201959 1201960 PMN2A_0635 PMN2A_0636 gid crtH TRUE 0.854 16.000 0.031 1.000 N NA
 1201963 1201964 PMN2A_0639 PMN2A_0640     TRUE 0.895 11.000 0.220 NA N NA
 1201964 1201965 PMN2A_0640 PMN2A_0641     FALSE 0.104 79.000 0.000 NA N NA
 1201966 1201967 PMN2A_0642 PMN2A_1040 pdxJ recC TRUE 0.800 26.000 0.006 1.000 N NA
 1201967 1203372 PMN2A_1040 PMN2A_0644 recC STE14 TRUE 0.846 13.000 0.034 1.000 N NA
 1203372 1201968 PMN2A_0644 PMN2A_0645 STE14 recB FALSE 0.190 96.000 0.096 1.000 N NA
 1201968 1201969 PMN2A_0645 PMN2A_0646 recB recD TRUE 0.959 -3.000 0.120 0.002   NA
 1201969 1201970 PMN2A_0646 PMN2A_0647 recD srmB FALSE 0.174 148.000 0.017 0.080   NA
 1201970 1203373 PMN2A_0647 PMN2A_0648 srmB   TRUE 0.815 12.000 0.026 NA   NA
 1203373 1201971 PMN2A_0648 PMN2A_0649     TRUE 0.827 22.000 0.042 NA   NA
 1201973 1201974 PMN2A_0651 PMN2A_0652 recR   TRUE 0.825 12.000 0.021 1.000 N NA
 1201975 1201976 PMN2A_0653 PMN2A_0654     FALSE 0.750 -15.000 0.034 NA   NA
 1201976 1201977 PMN2A_0654 PMN2A_0655   bioB TRUE 0.811 13.000 0.024 NA   NA
 1201977 1201978 PMN2A_0655 PMN2A_0656 bioB uppS FALSE 0.148 94.000 0.021 1.000 N NA
 1201978 1201979 PMN2A_0656 PMN2A_0657 uppS   FALSE 0.758 -3.000 0.043 NA   NA
 1201979 1201980 PMN2A_0657 PMN2A_0658   lysA TRUE 0.812 30.000 0.040 NA   NA
 1201981 1201982 PMN2A_0659 PMN2A_0660   clpC FALSE 0.041 190.000 0.032 1.000   NA
 1201982 1201983 PMN2A_0660 PMN2A_0661 clpC gldA TRUE 0.924 21.000 0.237 1.000 N NA
 1201983 1201984 PMN2A_0661 PMN2A_0662 gldA todF TRUE 0.911 6.000 0.250 1.000 N NA
 1201984 1203374 PMN2A_0662 PMN2A_0663 todF   TRUE 0.919 2.000 0.371 NA   NA
 1201985 1201986 PMN2A_0664 PMN2A_0665 cdsA cad FALSE 0.124 98.000 0.019 1.000 N NA
 1201987 1203375 PMN2A_0666 PMN2A_0667     TRUE 0.947 35.000 0.512 NA   NA
 1203375 1201988 PMN2A_0667 PMN2A_0668     FALSE 0.135 79.000 0.000 NA   NA
 1201989 1294550 PMN2A_0669   malQ   FALSE 0.627 -52.000 0.000 NA   NA
 1294550 1203376         FALSE 0.015 206.000 0.000 NA   NA
 1201991 1201992 PMN2A_0671 PMN2A_0672 pepN   FALSE 0.064 138.000 0.031 NA   NA
 1201992 1201993 PMN2A_0672 PMN2A_0673     FALSE 0.359 125.000 0.850 NA   NA
 1201994 1309221 PMN2A_0674 PMN2A_R0010   tRNA-Glu FALSE 0.531 50.000 0.000 NA   NA
 1309221 1201995 PMN2A_R0010 PMN2A_0675 tRNA-Glu petH FALSE 0.008 312.000 0.000 NA   NA
 1201995 1201996 PMN2A_0675 PMN2A_0676 petH zwf FALSE 0.063 173.000 0.117 1.000   NA
 1201997 1201998 PMN2A_0677 PMN2A_0678   cobB TRUE 0.883 14.000 0.167 NA N NA
 1201999 1202000 PMN2A_0679 PMN2A_0680     TRUE 0.784 -3.000 0.069 NA   NA
 1202000 1202001 PMN2A_0680 PMN2A_0681   ispA TRUE 0.869 -3.000 0.214 NA   NA
 1202001 1202002 PMN2A_0681 PMN2A_0682 ispA folD TRUE 0.964 43.000 0.250 1.000 Y NA
 1202004 1202005 PMN2A_0684 PMN2A_0685     FALSE 0.463 66.000 0.133 NA   NA
 1202005 1202006 PMN2A_0685 PMN2A_0686   leuA FALSE 0.060 123.000 0.003 NA   NA
 1202008 1202009 PMN2A_0688 PMN2A_0689     FALSE 0.752 -3.000 0.017 1.000 N NA
 1202010 1202011 PMN2A_0690 PMN2A_0691 guaB   FALSE 0.031 217.000 0.038 1.000   NA
 1202012 1202013 PMN2A_0692 PMN2A_0693     TRUE 0.835 23.000 0.021 1.000 N NA
 1202014 1294507 PMN2A_0694   petG   FALSE 0.680 37.000 0.000 NA   NA
 1202015 1202016 PMN2A_0695 PMN2A_0696 cytM lasT TRUE 0.831 3.000 0.041 1.000   NA
 1202016 1202017 PMN2A_0696 PMN2A_0697 lasT penP FALSE 0.644 54.000 0.046 1.000 N NA
 1202017 1202018 PMN2A_0697 PMN2A_0698 penP chlI FALSE 0.118 112.000 0.030 1.000 N NA
 1202018 1202019 PMN2A_0698 PMN2A_0699 chlI ruvC TRUE 0.802 1.000 0.026 1.000 N NA
 1202019 1202020 PMN2A_0699 PMN2A_0700 ruvC   TRUE 0.809 29.000 0.016 1.000 N NA
 1202020 1202021 PMN2A_0700 PMN2A_0701     FALSE 0.677 43.000 0.008 NA   NA
 1202021 1202022 PMN2A_0701 PMN2A_0702   thrA TRUE 0.881 36.000 0.180 NA   NA
 1202022 1202023 PMN2A_0702 PMN2A_0703 thrA   FALSE 0.263 93.000 0.214 NA   NA
 1202023 1202024 PMN2A_0703 PMN2A_0704   ddpA TRUE 0.868 43.000 0.225 NA   NA
 1202024 1202025 PMN2A_0704 PMN2A_0705 ddpA dppB TRUE 0.983 -78.000 0.267 0.014 Y NA
 1202029 1294556 PMN2A_0709       TRUE 0.798 2.000 0.065 NA   NA
 1294556 1202030   PMN2A_0710     FALSE 0.274 97.000 0.286 NA   NA
 1203378 1202031 PMN2A_0711 PMN2A_0712     FALSE 0.074 98.000 0.000 NA   NA
 1202033 1202034   PMN2A_0717     FALSE 0.464 58.000 0.000 1.000   NA
 1202034 1202035 PMN2A_0717 PMN2A_0718     FALSE 0.137 180.000 0.000 0.005   NA
 1202035 1202036 PMN2A_0718 PMN2A_0719     FALSE 0.088 240.000 0.000 0.005   NA
 1202038 1202039 PMN2A_0722 PMN2A_0723     FALSE 0.089 253.000 0.000 0.003   NA
 1202040 1294480 PMN2A_0724 PMN2A_0725     FALSE 0.704 9.000 0.000 NA   NA
 1294480 1202041 PMN2A_0725 PMN2A_0726     FALSE 0.016 265.000 0.000 1.000   NA
 1202041 1202042 PMN2A_0726 PMN2A_0727     FALSE 0.075 125.000 0.000 1.000   NA
 1202042 1202043 PMN2A_0727 PMN2A_0728     TRUE 0.815 17.000 0.000 1.000   NA
 1202043 1202044 PMN2A_0728 PMN2A_0729     FALSE 0.149 102.000 0.026 1.000   NA
 1202045 1202046 PMN2A_0730 PMN2A_0731     FALSE 0.026 158.000 0.000 NA   NA
 1202046 1202047 PMN2A_0731 PMN2A_0732     TRUE 0.792 -3.000 0.075 NA   NA
 1202047 1202048 PMN2A_0732 PMN2A_0733     TRUE 0.962 10.000 0.805 NA   NA
 1202048 1202049 PMN2A_0733 PMN2A_0734     FALSE 0.009 279.000 0.000 NA   NA
 1202054 1202055 PMN2A_0739 PMN2A_0740     FALSE 0.118 84.000 0.000 NA   NA
 1202055 1202056 PMN2A_0740 PMN2A_0741     FALSE 0.033 323.000 0.250 NA   NA
 1202059 1202060 PMN2A_0743 PMN2A_0744     FALSE 0.009 281.000 0.000 NA   NA
 1202063 1202064 PMN2A_0747 PMN2A_0748 acrA polA TRUE 0.815 27.000 0.017 1.000 N NA
 1202064 1202065 PMN2A_0748 PMN2A_0749 polA cysS FALSE 0.727 44.000 0.014 1.000 N NA
 1202068 1202069 PMN2A_0752 PMN2A_0753   pntB TRUE 0.899 -16.000 0.354 NA   NA
 1202069 1202070 PMN2A_0753 PMN2A_0754 pntB pntA-2 TRUE 0.968 12.000 0.072 0.002   NA
 1202070 1202071 PMN2A_0754 PMN2A_0755 pntA-2 pntA TRUE 0.983 -3.000 0.829 0.002   NA
 1202072 1202073 PMN2A_0756 PMN2A_0757     FALSE 0.014 208.000 0.000 NA   NA
 1202073 1202074 PMN2A_0757 PMN2A_0758     FALSE 0.080 106.000 0.011 NA   NA
 1202075 1202076 PMN2A_0759 PMN2A_0760 infA   FALSE 0.192 75.000 0.011 NA   NA
 1202076 1202077 PMN2A_0760 PMN2A_0761     TRUE 0.849 53.000 0.392 NA   NA
 1202077 1202078 PMN2A_0761 PMN2A_0762     TRUE 0.918 44.000 0.392 1.000   NA
 1202079 1202080 PMN2A_0763 PMN2A_0764   ilvN TRUE 0.839 6.000 0.065 1.000 N NA
 1202081 1202082 PMN2A_0765 PMN2A_0766     FALSE 0.729 -13.000 0.000 1.000   NA
 1202083 1202084 PMN2A_0767 PMN2A_0768 psbD psbC TRUE 0.982 -16.000 0.878 0.003   NA
 1202086 1202087 PMN2A_0770 PMN2A_0771   cobQ TRUE 0.820 27.000 0.036 NA   NA
 1202087 1202088 PMN2A_0771 PMN2A_0772 cobQ   TRUE 0.851 9.000 0.026 1.000   NA
 1202089 1309249 PMN2A_0773 PMN2A_R0011   tRNA-Ser FALSE 0.074 98.000 0.000 NA   NA
 1309249 1202090 PMN2A_R0011 PMN2A_0774 tRNA-Ser afuA FALSE 0.157 75.000 0.000 NA   NA
 1202091 1202092 PMN2A_0775 PMN2A_0776 piuC   FALSE 0.334 92.000 0.326 NA   NA
 1202093 1202094 PMN2A_0777 PMN2A_0778   glyQ FALSE 0.054 152.000 0.013 1.000   NA
 1202095 1294588 PMN2A_0779       FALSE 0.615 44.000 0.000 NA   NA
 1294588 1203383         FALSE 0.682 5.000 0.000 NA   NA
 1203383 1203384   PMN2A_0780     FALSE 0.641 -3.000 0.000 NA   NA
 1203384 1203385 PMN2A_0780 PMN2A_0781     FALSE 0.672 3.000 0.000 NA   NA
 1203385 1203386 PMN2A_0781       FALSE 0.061 109.000 0.000 NA   NA
 1203386 1294527         FALSE 0.006 425.000 0.000 NA   NA
 1203387 1202096 PMN2A_0782 PMN2A_0783     FALSE 0.562 48.000 0.000 NA   NA
 1202097 1203388 PMN2A_0784 PMN2A_0785     FALSE 0.010 277.000 0.000 NA   NA
 1203389 1202098   PMN2A_0786     FALSE 0.029 150.000 0.000 NA   NA
 1203391 1203392   PMN2A_0789     FALSE 0.073 99.000 0.000 NA   NA
 1294572 1203393 PMN2A_0790       FALSE 0.145 77.000 0.000 NA   NA
 1202101 1202102 PMN2A_0791 PMN2A_0792     FALSE 0.022 167.000 0.000 NA   NA
 1202104 1203395 PMN2A_0794 PMN2A_0795 isiB   FALSE 0.034 142.000 0.000 NA   NA
 1202105 1202106 PMN2A_0796 PMN2A_0797     TRUE 0.977 1.000 0.432 1.000 Y NA
 1202106 1202107 PMN2A_0797 PMN2A_0798     TRUE 0.847 6.000 0.054 1.000   NA
 1202108 1202109 PMN2A_0799 PMN2A_0800 sppA aroH TRUE 0.880 -3.000 0.207 1.000 N NA
 1202109 1202110 PMN2A_0800 PMN2A_0801 aroH   FALSE 0.171 98.000 0.114 NA   NA
 1202110 1202111 PMN2A_0801 PMN2A_0802   rpl34, rpmH FALSE 0.693 48.000 0.027 NA   NA
 1202111 1294475 PMN2A_0802 PMN2A_0803 rpl34, rpmH rnpA TRUE 0.942 46.000 0.787 1.000   NA
 1294475 1202112 PMN2A_0803 PMN2A_0804 rnpA   FALSE 0.757 -3.000 0.041 NA   NA
 1202112 1202113 PMN2A_0804 PMN2A_0805   yidC FALSE 0.184 85.000 0.043 NA   NA
 1202113 1202114 PMN2A_0805 PMN2A_0806 yidC   FALSE 0.471 58.000 0.012 1.000 N NA
 1202114 1202115 PMN2A_0806 PMN2A_0807   serS FALSE 0.248 123.000 0.011 0.077 N NA
 1202115 1202116 PMN2A_0807 PMN2A_0808 serS   TRUE 0.847 20.000 0.024 1.000 N NA
 1202116 1202117 PMN2A_0808 PMN2A_0809   rpsN FALSE 0.092 120.000 0.020 1.000 N NA
 1202117 1202118 PMN2A_0809 PMN2A_0810 rpsN   FALSE 0.151 185.000 0.019 1.000 Y NA
 1202119 1203397 PMN2A_0812 PMN2A_0813     FALSE 0.481 55.000 0.002 NA   NA
 1309222 1202121 PMN2A_R0012 PMN2A_0815 tRNA-Arg   FALSE 0.007 359.000 0.000 NA   NA
 1202121 1202122 PMN2A_0815 PMN2A_0816     FALSE 0.750 0.000 0.000 1.000   NA
 1202122 1202123 PMN2A_0816 PMN2A_0817     FALSE 0.198 79.000 0.000 1.000   NA
 1202124 1202125 PMN2A_0818 PMN2A_0819     FALSE 0.005 785.000 0.000 NA   NA
 1202126 1203400 PMN2A_0821       FALSE 0.007 363.000 0.000 NA   NA
 1203400 1309248   PMN2A_R0013   tRNA-Ala FALSE 0.626 -127.000 0.000 NA   NA
 1309248 1203402 PMN2A_R0013 PMN2A_0822 tRNA-Ala   FALSE 0.008 346.000 0.000 NA   NA
 1203402 1202127 PMN2A_0822 PMN2A_0823     FALSE 0.405 59.000 0.017 NA   NA
 1202127 1202128 PMN2A_0823 PMN2A_0824     TRUE 0.824 14.000 0.027 NA   NA
 1202128 1203403 PMN2A_0824       FALSE 0.006 442.000 0.000 NA   NA
 1202130 1294546 PMN2A_0826       FALSE 0.017 191.000 0.000 NA   NA
 1294546 1203405         FALSE 0.005 630.000 0.000 NA   NA
 1203405 1294604         FALSE 0.174 72.000 0.000 NA   NA
 1202132 1202133 PMN2A_0828 PMN2A_0829 lexA argF FALSE 0.356 66.000 0.020 1.000 N NA
 1202134 1202135 PMN2A_0830 PMN2A_0831     FALSE 0.343 106.000 0.010 0.013 N NA
 1202135 1202136 PMN2A_0831 PMN2A_0832     FALSE 0.697 45.000 0.021 NA   NA
 1202136 1203407 PMN2A_0832 PMN2A_0833     TRUE 0.901 -52.000 0.360 NA   NA
 1202138 1202139 PMN2A_0835 PMN2A_0836   pheS FALSE 0.134 93.000 0.011 1.000 N NA
 1202144 1202145 PMN2A_0840 PMN2A_0841 thiE thiS TRUE 0.974 -9.000 0.452 1.000 Y NA
 1202145 1202146 PMN2A_0841 PMN2A_0842 thiS   TRUE 0.929 19.000 0.310 NA   NA
 1202146 1202147 PMN2A_0842 PMN2A_0843     FALSE 0.228 127.000 0.400 NA   NA
 1202147 1203408 PMN2A_0843 PMN2A_0844     TRUE 0.819 58.000 0.571 NA   NA
 1202148 1202149 PMN2A_0845 PMN2A_0846     TRUE 0.807 3.000 0.070 NA   NA
 1202149 1202150 PMN2A_0846 PMN2A_0847   trmD FALSE 0.685 -13.000 0.011 NA   NA
 1202150 1202151 PMN2A_0847 PMN2A_0848 trmD era TRUE 0.944 6.000 0.010 0.020   NA
 1202153 1202154 PMN2A_0850 PMN2A_0851   phoH FALSE 0.229 76.000 0.024 NA   NA
 1202154 1202155 PMN2A_0851 PMN2A_0852 phoH rpsP TRUE 0.784 38.000 0.019 1.000 N NA
 1202155 1202156 PMN2A_0852 PMN2A_0853 rpsP ffh FALSE 0.413 88.000 0.361 1.000 N NA
 1202156 1202157 PMN2A_0853 PMN2A_0854 ffh   TRUE 0.795 39.000 0.016 1.000   NA
 1202159 1202160 PMN2A_0856 PMN2A_0857     FALSE 0.033 157.000 0.021 NA N NA
 1202163 1202164 PMN2A_0860 PMN2A_0861     FALSE 0.343 77.000 0.096 1.000   NA
 1202164 1202165 PMN2A_0861 PMN2A_0862     TRUE 0.867 -25.000 0.154 1.000   NA
 1202166 1202167 PMN2A_0863 PMN2A_0864 trpC lpd TRUE 0.789 43.000 0.057 1.000 N NA
 1202167 1202168 PMN2A_0864 PMN2A_0865 lpd   TRUE 0.841 -3.000 0.115 1.000 N NA
 1202168 1294481 PMN2A_0865       FALSE 0.060 110.000 0.000 NA   NA
 1202169 1309223 PMN2A_0866 PMN2A_R0014 murA tRNA-Leu FALSE 0.657 40.000 0.000 NA   NA
 1309223 1202170 PMN2A_R0014 PMN2A_0867 tRNA-Leu argD FALSE 0.627 -72.000 0.000 NA   NA
 1202170 1202171 PMN2A_0867 PMN2A_0868 argD folC TRUE 0.830 48.000 0.181 1.000 N NA
 1202172 1202173 PMN2A_0869 PMN2A_0870   codA TRUE 0.891 -3.000 0.246 1.000 N NA
 1309224 1202174 PMN2A_R0015 PMN2A_0871 tRNA-His   FALSE 0.112 86.000 0.000 NA   NA
 1202174 1202175 PMN2A_0871 PMN2A_0872   ddlA FALSE 0.589 55.000 0.020 1.000 N NA
 1202175 1202176 PMN2A_0872 PMN2A_0873 ddlA   TRUE 0.789 37.000 0.046 NA   NA
 1202176 1202177 PMN2A_0873 PMN2A_0874   ftsQ FALSE 0.738 -42.000 0.024 NA   NA
 1202177 1202178 PMN2A_0874 PMN2A_0875 ftsQ ftsZ FALSE 0.035 170.000 0.067 NA N NA
 1203409 1202181   PMN2A_0878     FALSE 0.709 10.000 0.000 NA   NA
 1202181 1202182 PMN2A_0878 PMN2A_0879     TRUE 0.815 39.000 0.084 NA   NA
 1202182 1202183 PMN2A_0879 PMN2A_0880     TRUE 0.963 61.000 0.745 0.004 Y NA
 1202183 1202184 PMN2A_0880 PMN2A_0881   ilvC FALSE 0.074 130.000 0.019 1.000 N NA
 1202184 1202185 PMN2A_0881 PMN2A_0882 ilvC cbiB TRUE 0.784 63.000 0.017 1.000 Y NA
 1202186 1202187 PMN2A_0883 PMN2A_0884 wcaJ   TRUE 0.879 62.000 0.344 1.000 Y NA
 1202187 1203410 PMN2A_0884 PMN2A_0885     FALSE 0.155 135.000 0.273 NA   NA
 1202188 1203411 PMN2A_0886 PMN2A_0887     FALSE 0.416 56.000 0.000 NA   NA
 1202189 1202190 PMN2A_0888 PMN2A_0889     FALSE 0.353 58.000 0.000 NA   NA
 1202190 1203412 PMN2A_0889 PMN2A_0890     FALSE 0.045 128.000 0.000 NA   NA
 1203412 1203413 PMN2A_0890 PMN2A_0891     FALSE 0.101 148.000 0.200 NA   NA
 1203413 1202191 PMN2A_0891 PMN2A_0892   himA FALSE 0.038 136.000 0.000 NA   NA
 1202193 1202194 PMN2A_0894 PMN2A_0895 melB   TRUE 0.948 -3.000 0.833 NA N NA
 1202194 1294478 PMN2A_0895 PMN2A_0896     TRUE 0.939 6.000 0.452 NA   NA
 1294478 1202195 PMN2A_0896 PMN2A_0897     TRUE 0.960 32.000 0.762 NA   NA
 1202195 1202196 PMN2A_0897 PMN2A_0898     TRUE 0.939 21.000 0.369 NA   NA
 1202197 1202198 PMN2A_0899 PMN2A_0900 pyrF tyrS TRUE 0.837 10.000 0.027 1.000 N NA
 1202198 1202199 PMN2A_0900 PMN2A_0901 tyrS   TRUE 0.823 26.000 0.034 NA   NA
 1202200 1202201 PMN2A_0902 PMN2A_0903   pepB TRUE 0.889 39.000 0.176 1.000   NA
 1202202 1202203 PMN2A_0904 PMN2A_0905   lpxB TRUE 0.801 0.000 0.034 1.000 N NA
 1202203 1202204 PMN2A_0905 PMN2A_0906 lpxB lpxA TRUE 0.951 -3.000 0.062 1.000 Y NA
 1202204 1202205 PMN2A_0906 PMN2A_0907 lpxA fabZ TRUE 0.838 5.000 0.071 1.000 N NA
 1202205 1202206 PMN2A_0907 PMN2A_0908 fabZ lpxC FALSE 0.471 64.000 0.083 1.000 N NA
 1202206 1202207 PMN2A_0908 PMN2A_0909 lpxC   TRUE 0.953 0.000 0.052 1.000 Y NA
 1202207 1202208 PMN2A_0909 PMN2A_0910   purC FALSE 0.635 55.000 0.058 1.000 N NA
 1202209 1202210 PMN2A_0911 PMN2A_0912 purD nblS TRUE 0.950 16.000 0.025 0.076 N NA
 1202211 1202212 PMN2A_0913 PMN2A_0914 kaiC kaiB FALSE 0.370 131.000 0.927 1.000   NA
 1202213 1202214 PMN2A_0915 PMN2A_0916 rplU rpmA TRUE 0.993 26.000 0.667 0.020 Y NA
 1202218 1202219 PMN2A_0920 PMN2A_0921 elaC   FALSE 0.110 93.000 0.011 NA   NA
 1202220 1202221 PMN2A_0922 PMN2A_0923     FALSE 0.126 124.000 0.130 NA   NA
 1202221 1202222 PMN2A_0923 PMN2A_0924     FALSE 0.058 114.000 0.000 NA   NA
 1202222 1202223 PMN2A_0924 PMN2A_0925   prmA FALSE 0.727 38.000 0.000 1.000 N NA
 1202223 1202224 PMN2A_0925 PMN2A_0926 prmA serA TRUE 0.813 2.000 0.053 1.000 N NA
 1202225 1202226 PMN2A_0927 PMN2A_0928     FALSE 0.159 155.000 0.442 NA   NA
 1202226 1309225 PMN2A_0928 PMN2A_R0018   tRNA-Val FALSE 0.200 69.000 0.000 NA   NA
 1202227 1202228 PMN2A_0929 PMN2A_0930 murD   FALSE 0.096 96.000 0.008 NA   NA
 1202228 1202229 PMN2A_0930 PMN2A_0931     FALSE 0.014 214.000 0.000 NA   NA
 1202229 1202230 PMN2A_0931 PMN2A_0932     FALSE 0.562 48.000 0.000 NA   NA
 1202231 1202232 PMN2A_0933 PMN2A_0934     FALSE 0.073 99.000 0.000 NA   NA
 1202232 1202233 PMN2A_0934 PMN2A_0935     FALSE 0.012 242.000 0.000 NA   NA
 1202234 1203417 PMN2A_0937       FALSE 0.062 108.000 0.000 NA   NA
 1202235 1203418 PMN2A_0938 PMN2A_0939     FALSE 0.200 69.000 0.000 NA   NA
 1202236 1202237 PMN2A_0940       FALSE 0.654 0.000 0.000 NA   NA
 1202237 1202238   PMN2A_0941     FALSE 0.713 11.000 0.000 NA   NA
 1294583 1202239   PMN2A_0942     FALSE 0.731 23.000 0.000 NA   NA
 1202239 1202240 PMN2A_0942 PMN2A_0943     FALSE 0.008 316.000 0.000 NA   NA
 1202240 1202241 PMN2A_0943 PMN2A_0944     FALSE 0.054 119.000 0.000 NA   NA
 1202242 1202243 PMN2A_0945 PMN2A_0946     FALSE 0.641 -3.000 0.000 NA   NA
 1202243 1203420 PMN2A_0946       FALSE 0.011 250.000 0.000 NA   NA
 1203420 1203421         FALSE 0.200 69.000 0.000 NA   NA
 1202244 1202245 PMN2A_0947       FALSE 0.014 207.000 0.000 NA   NA
 1203422 1203423 PMN2A_0948       FALSE 0.048 125.000 0.000 NA   NA
 1203423 1202246   PMN2A_0949     FALSE 0.724 26.000 0.000 NA   NA
 1202246 1202247 PMN2A_0949 PMN2A_0950     FALSE 0.005 596.000 0.000 NA   NA
 1202247 1362593 PMN2A_0950     pseudo FALSE 0.038 136.000 0.000 NA   NA
 1203426 1202248 PMN2A_0953 PMN2A_0954     FALSE 0.641 -3.000 0.000 NA   NA
 1202248 1202249 PMN2A_0954 PMN2A_0955     FALSE 0.353 58.000 0.000 NA   NA
 1202249 1294553 PMN2A_0955       FALSE 0.022 168.000 0.000 NA   NA
 1294553 1203427   PMN2A_0956     FALSE 0.628 -19.000 0.000 NA   NA
 1203428 1203430   PMN2A_0958     FALSE 0.007 358.000 0.000 NA   NA
 1202253 1202254 PMN2A_0961 PMN2A_0962     FALSE 0.008 304.000 0.000 NA   NA
 1202254 1202255 PMN2A_0962 PMN2A_0963   rpoZ TRUE 0.941 1.000 0.024 0.023   NA
 1202257 1202258 PMN2A_0966 PMN2A_0967 gpmI secG TRUE 0.836 10.000 0.041 1.000 N NA
 1202259 1202260 PMN2A_0968 PMN2A_0969 groEL groES TRUE 0.961 63.000 0.905 0.009 Y NA
 1202261 1202262 PMN2A_0970 PMN2A_0971 atpD atpC TRUE 0.970 59.000 0.837 0.004 Y NA
 1202263 1202264 PMN2A_0972 PMN2A_0973   pepP FALSE 0.032 170.000 0.000 1.000   NA
 1202265 1202266 PMN2A_0974 PMN2A_0975     FALSE 0.641 -3.000 0.000 NA   NA
 1202266 1202267 PMN2A_0975 PMN2A_0976   nadD FALSE 0.739 -3.000 0.000 1.000   NA
 1202267 1202268 PMN2A_0976 PMN2A_0977 nadD nadE TRUE 0.980 -3.000 0.023 0.003 Y NA
 1202269 1203433 PMN2A_0978 PMN2A_0979     TRUE 0.864 8.000 0.125 NA   NA
 1203433 1202270 PMN2A_0979 PMN2A_0980     FALSE 0.505 54.000 0.003 NA   NA
 1202270 1202271 PMN2A_0980 PMN2A_0981   atpA TRUE 0.994 33.000 0.846 0.004 Y NA
 1202271 1202272 PMN2A_0981 PMN2A_0982 atpA atpH TRUE 0.962 63.000 0.864 0.004 Y NA
 1202272 1202273 PMN2A_0982 PMN2A_0983 atpH   TRUE 0.983 0.000 0.132 0.004 Y NA
 1202273 1202274 PMN2A_0983 PMN2A_0984     TRUE 0.990 -3.000 0.569 0.004 Y NA
 1202274 1202275 PMN2A_0984 PMN2A_0985   atpE FALSE 0.664 130.000 0.368 0.004 Y NA
 1202275 1202276 PMN2A_0985 PMN2A_0986 atpE atpB FALSE 0.563 169.000 0.679 0.004 Y NA
 1202276 1202277 PMN2A_0986 PMN2A_0987 atpB   FALSE 0.443 76.000 0.208 1.000   NA
 1202278 1202279 PMN2A_0988 PMN2A_0989   ccdA TRUE 0.918 20.000 0.202 1.000 N NA
 1202279 1202280 PMN2A_0989 PMN2A_0990 ccdA resB TRUE 0.974 6.000 0.371 NA Y NA
 1202282 1202283 PMN2A_0992 PMN2A_0993   glnB TRUE 0.947 40.000 0.682 NA   NA
 1202285 1202286 PMN2A_0995 PMN2A_0996   purB FALSE 0.653 45.000 0.009 NA   NA
 1202286 1202287 PMN2A_0996 PMN2A_0997 purB fumC FALSE 0.069 129.000 0.011 1.000 N NA
 1202289 1202290 PMN2A_0999 PMN2A_1000 bioF   TRUE 0.839 -3.000 0.143 NA   NA
 1202290 1202291 PMN2A_1000 PMN2A_1001     FALSE 0.669 -19.000 0.004 NA   NA
 1202291 1202292 PMN2A_1001 PMN2A_1002   bioD TRUE 0.950 -3.000 0.030 1.000 Y NA
 1202292 1202293 PMN2A_1002 PMN2A_1003 bioD bioA TRUE 0.971 52.000 0.124 0.001 Y NA
 1202296 1202297 PMN2A_1006 PMN2A_1007   fer TRUE 0.869 16.000 0.047 1.000   NA
 1202297 1202298 PMN2A_1007 PMN2A_1008 fer   TRUE 0.852 15.000 0.075 NA   NA
 1202298 1202299 PMN2A_1008 PMN2A_1009     TRUE 0.958 0.000 1.000 NA   NA
 1202299 1202300 PMN2A_1009 PMN2A_1010     FALSE 0.092 92.000 0.000 NA   NA
 1202300 1202301 PMN2A_1010       FALSE 0.727 25.000 0.000 NA   NA
 1202301 1202302   PMN2A_1011   putP FALSE 0.533 66.000 0.213 NA   NA
 1202302 1202303 PMN2A_1011 PMN2A_1012 putP   TRUE 0.822 31.000 0.011 1.000   NA
 1202303 1202304 PMN2A_1012 PMN2A_1013   hli3 TRUE 0.800 -3.000 0.022 1.000   NA
 1202304 1202305 PMN2A_1013 PMN2A_1014 hli3 rpoC2 FALSE 0.712 67.000 0.476 1.000   NA
 1202305 1202306 PMN2A_1014 PMN2A_1015 rpoC2 rpoC1 TRUE 0.980 43.000 0.031 0.001 Y NA
 1202306 1202307 PMN2A_1015 PMN2A_1016 rpoC1 rpoB TRUE 0.992 43.000 0.851 0.001 Y NA
 1202307 1202308 PMN2A_1016 PMN2A_1017 rpoB tatD FALSE 0.011 255.000 0.012 NA N NA
 1202308 1202309 PMN2A_1017 PMN2A_1018 tatD rpsT FALSE 0.704 44.000 0.034 NA N NA
 1202311 1202312 PMN2A_1020 PMN2A_1021 rpiA   TRUE 0.819 37.000 0.030 1.000 N NA
 1202313 1202314 PMN2A_1022 PMN2A_1023   nusA TRUE 0.876 56.000 0.759 NA   NA
 1202314 1202315 PMN2A_1023 PMN2A_1024 nusA   TRUE 0.965 -3.000 0.323 NA Y NA
 1202315 1202316 PMN2A_1024 PMN2A_1025   infB FALSE 0.550 61.000 0.171 NA N NA
 1309226 1202318 PMN2A_R0019 PMN2A_1027 tRNA-Thr folE FALSE 0.010 259.000 0.000 NA   NA
 1202320 1202321 PMN2A_1029 PMN2A_1030     FALSE 0.733 16.000 0.000 NA   NA
 1202322 1202323 PMN2A_1031 PMN2A_1032     FALSE 0.026 159.000 0.000 NA   NA
 1202326 1202327 PMN2A_1035 PMN2A_1036 lraI   FALSE 0.697 55.000 0.143 NA   NA
 1202327 1202328 PMN2A_1036 PMN2A_1037     TRUE 0.858 10.000 0.107 NA   NA
 1202328 1202329 PMN2A_1037 PMN2A_1038     TRUE 0.901 -12.000 0.357 NA   NA
 1202329 1203435 PMN2A_1038       FALSE 0.031 147.000 0.000 NA   NA
 1203435 1362594       pseudo FALSE 0.062 108.000 0.000 NA   NA
 1362594 1202330   PMN2A_1039 pseudo   FALSE 0.028 154.000 0.000 NA   NA
 1202332 1203436 PMN2A_1042 PMN2A_1043     FALSE 0.008 352.000 0.000 NA   NA
 1202333 1202334 PMN2A_1044 PMN2A_1045 livF urtD TRUE 0.955 0.000 0.126 0.013   NA
 1202334 1202335 PMN2A_1045 PMN2A_1046 urtD urtC TRUE 0.865 -3.000 0.137 1.000   NA
 1202335 1202336 PMN2A_1046 PMN2A_1047 urtC livH TRUE 0.993 4.000 0.888 0.013 Y NA
 1202336 1202337 PMN2A_1047 PMN2A_1048 livH   FALSE 0.764 77.000 0.429 NA Y NA
 1202337 1202338 PMN2A_1048 PMN2A_1049   ureG FALSE 0.074 133.000 0.079 NA N NA
 1202338 1202339 PMN2A_1049 PMN2A_1050 ureG ureF TRUE 0.990 0.000 0.550 0.004 Y NA
 1202339 1202340 PMN2A_1050 PMN2A_1051 ureF ureE TRUE 0.993 21.000 0.560 0.004 Y NA
 1202341 1202342 PMN2A_1052 PMN2A_1053 ureD ureA TRUE 0.966 50.000 0.664 0.004 N NA
 1202342 1202343 PMN2A_1053 PMN2A_1054 ureA ureB TRUE 0.993 9.000 0.595 0.001 Y NA
 1202343 1202344 PMN2A_1054 PMN2A_1055 ureB ureC TRUE 0.991 2.000 0.486 0.001 Y NA
 1203437 1294502         FALSE 0.696 7.000 0.000 NA   NA
 1294502 1202346   PMN2A_1057     FALSE 0.014 215.000 0.000 NA   NA
 1203438 1294570         FALSE 0.680 37.000 0.000 NA   NA
 1294570 1202347   PMN2A_1058     FALSE 0.015 206.000 0.000 NA   NA
 1202347 1202348 PMN2A_1058 PMN2A_1059   rbpD FALSE 0.087 93.000 0.000 NA   NA
 1202349 1202350 PMN2A_1060 PMN2A_1061 rpsU   FALSE 0.387 57.000 0.000 NA   NA
 1294511 1202352   PMN2A_1063     FALSE 0.012 239.000 0.000 NA   NA
 1202353 1202354 PMN2A_1064 PMN2A_1065     TRUE 0.873 45.000 0.289 NA   NA
 1202354 1202355 PMN2A_1065 PMN2A_1066     TRUE 0.817 -3.000 0.110 NA   NA
 1202356 1202357 PMN2A_1067 PMN2A_1068 rne rnhB TRUE 0.944 3.000 0.033 0.019 N NA
 1202360 1202361 PMN2A_1071 PMN2A_1072     TRUE 0.832 3.000 0.047 1.000   NA
 1202361 1202362 PMN2A_1072 PMN2A_1073   rpsJ FALSE 0.501 61.000 0.025 1.000   NA
 1202362 1202363 PMN2A_1073 PMN2A_1074 rpsJ tufA FALSE 0.490 121.000 0.318 1.000 Y NA
 1202363 1202364 PMN2A_1074 PMN2A_1075 tufA fusA TRUE 0.987 44.000 0.400 0.002 Y NA
 1202364 1202365 PMN2A_1075 PMN2A_1076 fusA rpsG FALSE 0.631 106.000 0.579 1.000 Y NA
 1202365 1202366 PMN2A_1076 PMN2A_1077 rpsG rpsL TRUE 0.986 49.000 0.620 0.004 Y NA
 1202367 1202368 PMN2A_1078 PMN2A_1079 gltB   TRUE 0.849 11.000 0.086 NA   NA
 1202369 1202370 PMN2A_1080 PMN2A_1081   cobJ FALSE 0.263 138.000 0.004 1.000 Y NA
 1202371 1202372 PMN2A_1082 PMN2A_1083 psaA psaB TRUE 0.985 25.000 0.513 0.003   NA
 1202373 1202374 PMN2A_1084 PMN2A_1085 psaL psaI TRUE 0.979 38.000 0.583 0.013   NA
 1202376 1202377 PMN2A_1087 PMN2A_1088     TRUE 0.812 33.000 0.054 NA   NA
 1203439 1202379   PMN2A_1090     FALSE 0.213 123.000 0.333 NA   NA
 1202379 1202380 PMN2A_1090 PMN2A_1091     FALSE 0.092 92.000 0.000 NA   NA
 1294524 1203443         FALSE 0.662 1.000 0.000 NA   NA
 1202383 1203445 PMN2A_1094 PMN2A_1095     FALSE 0.074 98.000 0.000 NA   NA
 1203446 1203447         FALSE 0.734 19.000 0.000 NA   NA
 1202384 1202385 PMN2A_1096 PMN2A_1097     FALSE 0.641 -3.000 0.000 NA   NA
 1202385 1309246 PMN2A_1097 PMN2A_R0020   tRNA-Ser FALSE 0.006 462.000 0.000 NA   NA
 1309246 1202386 PMN2A_R0020 PMN2A_1098 tRNA-Ser alr FALSE 0.299 61.000 0.000 NA   NA
 1202388 1202389 PMN2A_1100 PMN2A_1101 prfA rpmE TRUE 0.964 36.000 0.110 1.000 Y NA
 1202389 1202390 PMN2A_1101 PMN2A_1102 rpmE rpsI TRUE 0.981 37.000 0.062 0.019 Y NA
 1202390 1202391 PMN2A_1102 PMN2A_1103 rpsI rplM TRUE 0.989 -3.000 0.601 0.019 Y NA
 1202391 1202392 PMN2A_1103 PMN2A_1104 rplM truA FALSE 0.141 204.000 0.058 1.000 Y NA
 1202392 1202393 PMN2A_1104 PMN2A_1105 truA rplQ TRUE 0.932 50.000 0.102 1.000 Y NA
 1202393 1202394 PMN2A_1105 PMN2A_1106 rplQ rpoA TRUE 0.958 40.000 0.873 1.000 N NA
 1202394 1202395 PMN2A_1106 PMN2A_1107 rpoA rpsK TRUE 0.847 51.000 0.308 1.000 N NA
 1202395 1202396 PMN2A_1107 PMN2A_1108 rpsK rpsM TRUE 0.953 64.000 0.810 0.019 Y NA
 1202396 1202397 PMN2A_1108 PMN2A_1110 rpsM adk FALSE 0.013 274.000 0.000 1.000 N NA
 1202397 1202398 PMN2A_1110 PMN2A_1111 adk secY TRUE 0.827 24.000 0.019 1.000 N NA
 1202398 1202399 PMN2A_1111 PMN2A_1112 secY rplO TRUE 0.827 60.000 0.730 1.000 N NA
 1202399 1202400 PMN2A_1112 PMN2A_1113 rplO rpsE TRUE 0.984 6.000 0.148 0.025 Y NA
 1202400 1202401 PMN2A_1113 PMN2A_1114 rpsE rplR TRUE 0.994 15.000 0.814 0.025 Y NA
 1202401 1202402 PMN2A_1114 PMN2A_1115 rplR rplF TRUE 0.993 34.000 0.815 0.019 Y NA
 1202402 1202403 PMN2A_1115 PMN2A_1116 rplF rpsH TRUE 0.994 18.000 0.808 0.019 Y NA
 1202403 1202404 PMN2A_1116 PMN2A_1117 rpsH rplE TRUE 0.985 20.000 0.059 0.019 Y NA
 1202404 1202405 PMN2A_1117 PMN2A_1118 rplE rplX TRUE 0.859 90.000 0.758 0.019 Y NA
 1202405 1202406 PMN2A_1118 PMN2A_1119 rplX rplN TRUE 0.991 3.000 0.810 0.025 Y NA
 1202406 1202407 PMN2A_1119 PMN2A_1120 rplN rpsQ TRUE 0.990 -3.000 0.791 0.025 Y NA
 1202407 1202408 PMN2A_1120 PMN2A_1121 rpsQ rpmC TRUE 0.990 -31.000 0.828 0.019 Y NA
 1202408 1202409 PMN2A_1121 PMN2A_1122 rpmC rplP TRUE 0.990 -3.000 0.802 0.019 Y NA
 1202409 1202410 PMN2A_1122 PMN2A_1123 rplP rpsC TRUE 0.993 13.000 0.828 0.025 Y NA
 1202410 1202411 PMN2A_1123 PMN2A_1124 rpsC rplV TRUE 0.990 0.000 0.719 0.025 Y NA
 1202411 1202412 PMN2A_1124 PMN2A_1125 rplV rpsS TRUE 0.991 3.000 0.769 0.025 Y NA
 1202412 1202413 PMN2A_1125 PMN2A_1126 rpsS rplB TRUE 0.992 36.000 0.820 0.025 Y NA
 1202413 1202414 PMN2A_1126 PMN2A_1127 rplB rplW TRUE 0.992 5.000 0.849 0.019 Y NA
 1202414 1202415 PMN2A_1127 PMN2A_1128 rplW rplD TRUE 0.988 -7.000 0.513 0.019 Y NA
 1202415 1202416 PMN2A_1128 PMN2A_1129 rplD rplC TRUE 0.987 0.000 0.361 0.019 Y NA
 1202417 1202418 PMN2A_1130 PMN2A_1131   hycB TRUE 0.962 13.000 0.595 1.000   NA
 1202418 1309227 PMN2A_1131 PMN2A_R0021 hycB tRNA-Gln FALSE 0.018 183.000 0.000 NA   NA
 1309227 1202419 PMN2A_R0021 PMN2A_1132 tRNA-Gln   FALSE 0.727 14.000 0.000 NA   NA
 1202419 1202420 PMN2A_1132 PMN2A_1133   recA FALSE 0.082 113.000 0.019 NA   NA
 1202421 1202422 PMN2A_1134 PMN2A_1135   dinG TRUE 0.809 38.000 0.072 NA   NA
 1202427 1202428 PMN2A_1140 PMN2A_1141   thiF TRUE 0.870 24.000 0.108 NA   NA
 1202431 1202432 PMN2A_1144 PMN2A_1145 speD recF TRUE 0.789 41.000 0.024 1.000 N NA
 1202433 1202434 PMN2A_1146 PMN2A_1147   ppc TRUE 0.939 2.000 0.500 NA   NA
 1202434 1202435 PMN2A_1147 PMN2A_1148 ppc   TRUE 0.948 36.000 0.457 1.000   NA
 1202435 1202436 PMN2A_1148 PMN2A_1149     TRUE 0.819 -3.000 0.059 1.000   NA
 1202436 1202437 PMN2A_1149 PMN2A_1150   psaD FALSE 0.548 62.000 0.091 1.000   NA
 1202437 1202438 PMN2A_1150 PMN2A_1151 psaD   FALSE 0.330 103.000 0.381 1.000   NA
 1202438 1202439 PMN2A_1151 PMN2A_1152     FALSE 0.014 394.000 0.024 1.000 N NA
 1202439 1202440 PMN2A_1152 PMN2A_1153   mrp TRUE 0.962 10.000 0.041 1.000 Y NA
 1202442 1202443 PMN2A_1155 PMN2A_1156     TRUE 0.907 10.000 0.238 NA   NA
 1203448 1202444   PMN2A_1157   rnd FALSE 0.066 104.000 0.000 NA   NA
 1202445 1202446 PMN2A_1158 PMN2A_1159     TRUE 0.833 58.000 0.667 NA   NA
 1309229 1203449 PMN2A_R0023 PMN2A_1160 tRNA-Cys   FALSE 0.008 341.000 0.000 NA   NA
 1202448 1202449 PMN2A_1163 PMN2A_1164   purM FALSE 0.034 161.000 0.018 NA   NA
 1202451 1202452 PMN2A_1166 PMN2A_1167 wzb pebB TRUE 0.844 19.000 0.015 1.000   NA
 1202452 1202453 PMN2A_1167 PMN2A_1168 pebB pebA TRUE 0.988 14.000 0.808 0.001   NA
 1202453 1202454 PMN2A_1168 PMN2A_1169 pebA ho1 FALSE 0.126 167.000 0.360 1.000   NA
 1202456 1202457 PMN2A_1171 PMN2A_1172   lldD TRUE 0.824 31.000 0.062 NA   NA
 1202457 1202458 PMN2A_1172 PMN2A_1173 lldD galM FALSE 0.063 147.000 0.038 1.000 N NA
 1202458 1202459 PMN2A_1173 PMN2A_1174 galM   TRUE 0.927 4.000 0.339 1.000   NA
 1202459 1202460 PMN2A_1174 PMN2A_1175   kefB FALSE 0.196 118.000 0.179 1.000   NA
 1202462 1202463 PMN2A_1177 PMN2A_1178     TRUE 0.966 32.000 0.950 NA   NA
 1202463 1309245 PMN2A_1178 PMN2A_R0024   tRNA-Arg FALSE 0.070 101.000 0.000 NA   NA
 1309413 1202464 PMN2A_R0025 PMN2A_1179 rnpB rnc FALSE 0.100 89.000 0.000 NA   NA
 1202466 1202467 PMN2A_1181 PMN2A_1182 rimM manC FALSE 0.600 53.000 0.011 1.000 N NA
 1202468 1202469 PMN2A_1183 PMN2A_1184 glmS psaC FALSE 0.429 66.000 0.031 1.000   NA
 1202470 1202471 PMN2A_1185 PMN2A_1186 acpP fabF TRUE 0.977 8.000 0.346 1.000 Y NA
 1202471 1202472 PMN2A_1186 PMN2A_1187 fabF tktA FALSE 0.555 58.000 0.062 1.000 N NA
 1202473 1203451 PMN2A_1188 PMN2A_1189 thiC   FALSE 0.017 207.000 0.006 NA   NA
 1203451 1202474 PMN2A_1189 PMN2A_1190     TRUE 0.933 12.000 0.365 NA   NA
 1202474 1202475 PMN2A_1190 PMN2A_1191     TRUE 0.921 -3.000 0.365 1.000   NA
 1202475 1202476 PMN2A_1191 PMN2A_1192   ruvB FALSE 0.760 -3.000 0.019 1.000 N NA
 1202478 1202479 PMN2A_1194 PMN2A_1195   lysS FALSE 0.758 42.000 0.026 NA   NA
 1202479 1202480 PMN2A_1195 PMN2A_1196 lysS   FALSE 0.719 49.000 0.027 1.000 N NA
 1202480 1203452 PMN2A_1196 PMN2A_1197     FALSE 0.091 167.000 0.273 NA   NA
 1203452 1202481 PMN2A_1197 PMN2A_1198   mreC FALSE 0.739 -16.000 0.024 NA   NA
 1202481 1202482 PMN2A_1198 PMN2A_1199 mreC mreB TRUE 0.817 37.000 0.043 1.000 N NA
 1202484 1202485 PMN2A_1201 PMN2A_1202 dedA sam1 TRUE 0.862 25.000 0.024 1.000   NA
 1202487 1202488 PMN2A_1204 PMN2A_1205   mutY FALSE 0.779 37.000 0.014 1.000 N NA
 1202490 1202491 PMN2A_1207 PMN2A_1208   mgtE FALSE 0.090 101.000 0.000 1.000 N NA
 1203453 1203454 PMN2A_1210 PMN2A_1211     TRUE 0.990 1.000 0.722 0.050 Y NA
 1203454 1203455 PMN2A_1211 PMN2A_1212     TRUE 0.968 13.000 0.900 NA   NA
 1203455 1202493 PMN2A_1212 PMN2A_1213   gyrB FALSE 0.724 -3.000 0.020 NA   NA
 1202494 1202495 PMN2A_1214 PMN2A_1215 miaA infC TRUE 0.818 60.000 0.020 1.000 Y NA
 1202495 1202496 PMN2A_1215 PMN2A_1216 infC   FALSE 0.135 92.000 0.008 1.000 N NA
 1202496 1202497 PMN2A_1216 PMN2A_1217   cysE TRUE 0.941 4.000 0.452 1.000 N NA
 1202498 1202499 PMN2A_1218 PMN2A_1219     TRUE 0.928 -28.000 0.000 NA Y NA
 1202499 1202500 PMN2A_1219 PMN2A_1220   secA TRUE 0.941 18.000 0.000 0.071 N NA
 1202501 1202502 PMN2A_1221 PMN2A_1222 gmd   FALSE 0.530 56.000 0.000 1.000   NA
 1202502 1203456 PMN2A_1222       FALSE 0.087 93.000 0.000 NA   NA
 1203456 1202503   PMN2A_1223     FALSE 0.131 80.000 0.000 NA   NA
 1202503 1202504 PMN2A_1223 PMN2A_1224     TRUE 0.900 -3.000 0.250 1.000   NA
 1202504 1202505 PMN2A_1224 PMN2A_1225     TRUE 0.985 3.000 0.917 1.000 Y NA
 1202506 1202507 PMN2A_1226 PMN2A_1227     FALSE 0.722 13.000 0.000 NA   NA
 1202509 1203458 PMN2A_1229 PMN2A_1230     FALSE 0.773 5.000 0.000 1.000   NA
 1202510 1202511 PMN2A_1231 PMN2A_1232     TRUE 0.815 18.000 0.000 1.000   NA
 1203460 1202513 PMN2A_1234 PMN2A_1235     FALSE 0.773 5.000 0.000 1.000   NA
 1202513 1202514 PMN2A_1235 PMN2A_1236   rfbB FALSE 0.010 412.000 0.000 1.000   NA
 1202514 1202515 PMN2A_1236 PMN2A_1237 rfbB rfbA TRUE 0.979 39.000 0.000 0.003 Y NA
 1202515 1294516 PMN2A_1237   rfbA   FALSE 0.005 542.000 0.000 NA   NA
 1202516 1202517 PMN2A_1239 PMN2A_1240 rfbD rfbC TRUE 0.963 -3.000 0.197 1.000 Y NA
 1202517 1309244 PMN2A_1240 PMN2A_R0026 rfbC tRNA-Gly FALSE 0.005 547.000 0.000 NA   NA
 1309244 1202518 PMN2A_R0026 PMN2A_1241 tRNA-Gly ribH FALSE 0.141 78.000 0.000 NA   NA
 1202518 1202519 PMN2A_1241 PMN2A_1242 ribH   FALSE 0.150 102.000 0.037 1.000   NA
 1202522 1202523 PMN2A_1245 PMN2A_1246 holA lysC TRUE 0.810 28.000 0.015 1.000 N NA
 1202524 1202525 PMN2A_1247 PMN2A_1248 uvrB   FALSE 0.157 91.000 0.002 1.000   NA
 1202527 1202528 PMN2A_1250 PMN2A_1251   dapA FALSE 0.658 74.000 0.605 1.000   NA
 1202528 1202529 PMN2A_1251 PMN2A_1252 dapA asd TRUE 0.947 -46.000 0.052 1.000 Y NA
 1203462 1202530   PMN2A_1253   tig FALSE 0.100 89.000 0.000 NA   NA
 1202530 1202531 PMN2A_1253 PMN2A_1254 tig   FALSE 0.385 116.000 0.025 1.000 Y NA
 1202531 1202532 PMN2A_1254 PMN2A_1255   clpX FALSE 0.642 106.000 0.037 0.004 Y NA
 1202532 1202533 PMN2A_1255 PMN2A_1256 clpX dnaX FALSE 0.137 160.000 0.008 0.071 N NA
 1202534 1202535 PMN2A_1257 PMN2A_1258     TRUE 0.833 46.000 0.164 1.000 N NA
 1202536 1202537 PMN2A_1259 PMN2A_1260 rpmI rplT TRUE 0.985 52.000 0.928 0.019 Y NA
 1202537 1202538 PMN2A_1260 PMN2A_1261 rplT   FALSE 0.054 150.000 0.011 1.000   NA
 1202538 1202539 PMN2A_1261 PMN2A_1262   thiG TRUE 0.819 29.000 0.005 1.000   NA
 1202539 1202540 PMN2A_1262 PMN2A_1263 thiG   FALSE 0.615 50.000 0.018 NA   NA
 1202540 1202541 PMN2A_1263 PMN2A_1264   sqdB FALSE 0.581 57.000 0.079 NA   NA
 1202541 1202542 PMN2A_1264 PMN2A_1265 sqdB   TRUE 0.968 37.000 0.194 1.000 Y NA
 1202543 1202544 PMN2A_1266 PMN2A_1267   gcvP FALSE 0.076 126.000 0.024 NA   NA
 1202544 1202545 PMN2A_1267 PMN2A_1268 gcvP gcvH FALSE 0.749 102.000 0.249 0.001 Y NA
 1202545 1202546 PMN2A_1268 PMN2A_1269 gcvH   TRUE 0.861 21.000 0.060 1.000 N NA
 1202546 1202547 PMN2A_1269 PMN2A_1270     TRUE 0.799 35.000 0.037 NA   NA
 1202548 1202549 PMN2A_1271 PMN2A_1272 ole1 rplI FALSE 0.691 43.000 0.000 1.000 N NA
 1202549 1202550 PMN2A_1272 PMN2A_1273 rplI dnaB FALSE 0.537 58.000 0.048 1.000 N NA
 1202550 1202551 PMN2A_1273 PMN2A_1274 dnaB gidA TRUE 0.787 35.000 0.012 1.000 N NA
 1202551 1202552 PMN2A_1274 PMN2A_1275 gidA ubiC FALSE 0.730 6.000 0.008 NA   NA
 1202553 1202554 PMN2A_1276 PMN2A_1277     TRUE 0.835 54.000 0.387 NA   NA
 1202555 1202556 PMN2A_1278 PMN2A_1279   lig TRUE 0.791 19.000 0.016 NA   NA
 1202556 1294589 PMN2A_1279   lig   FALSE 0.771 19.000 0.006 NA   NA
 1202557 1202558 PMN2A_1280 PMN2A_1281   valS FALSE 0.627 -72.000 0.000 NA   NA
 1202558 1202559 PMN2A_1281 PMN2A_1282 valS   FALSE 0.189 74.000 0.004 NA   NA
 1202561 1309243 PMN2A_1284 PMN2A_R0027   tRNA-Val FALSE 0.735 17.000 0.000 NA   NA
 1202562 1202563 PMN2A_1285 PMN2A_1286   speE TRUE 0.825 11.000 0.011 1.000   NA
 1202563 1202564 PMN2A_1286 PMN2A_1287 speE speB TRUE 0.951 -3.000 0.064 1.000 Y NA
 1202565 1202566 PMN2A_1289 PMN2A_1290 gcvT aspS TRUE 0.811 57.000 0.018 0.036 N NA
 1202566 1202567 PMN2A_1290 PMN2A_1291 aspS pyrG FALSE 0.099 104.000 0.008 1.000 N NA
 1202567 1202568 PMN2A_1291 PMN2A_1292 pyrG nrdG FALSE 0.768 1.000 0.016 1.000 N NA
 1202568 1202569 PMN2A_1292 PMN2A_1293 nrdG   TRUE 0.833 50.000 0.270 NA   NA
 1202569 1202570 PMN2A_1293 PMN2A_1294     FALSE 0.769 0.000 0.037 NA   NA
 1202570 1202571 PMN2A_1294 PMN2A_1295   pabC TRUE 0.962 -3.000 0.180 1.000 Y NA
 1202572 1202573 PMN2A_1296 PMN2A_1297 cysG   FALSE 0.739 -3.000 0.000 1.000   NA
 1203464 1202574   PMN2A_1298   nirA FALSE 0.065 148.000 0.083 NA   NA
 1202574 1202575 PMN2A_1298 PMN2A_1299 nirA focA FALSE 0.092 245.000 0.000 1.000 Y NA
 1202575 1202576 PMN2A_1299 PMN2A_1300 focA   FALSE 0.031 219.000 0.039 1.000   NA
 1202576 1202577 PMN2A_1300 PMN2A_1301     TRUE 0.784 7.000 0.000 1.000   NA
 1202579 1202580 PMN2A_1303 PMN2A_1304   ppk TRUE 0.818 61.000 0.037 1.000 Y NA
 1202580 1202581 PMN2A_1304 PMN2A_1305 ppk   FALSE 0.046 156.000 0.019 1.000 N NA
 1202581 1202582 PMN2A_1305 PMN2A_1306   SEC59 TRUE 0.914 4.000 0.292 1.000 N NA
 1202584 1202585 PMN2A_1308 PMN2A_1309 acnB   TRUE 0.865 11.000 0.062 1.000   NA
 1202585 1202586 PMN2A_1309       TRUE 0.963 25.000 0.000 0.001   NA
 1202587 1202588 PMN2A_1310 PMN2A_1311   purU FALSE 0.762 -3.000 0.050 NA   NA
 1202591 1203465 PMN2A_1314 PMN2A_1315 aroE   FALSE 0.731 23.000 0.000 NA   NA
 1203465 1202592 PMN2A_1315 PMN2A_1316   rpsF FALSE 0.135 79.000 0.000 NA   NA
 1202593 1203466 PMN2A_1317   argG   FALSE 0.040 134.000 0.000 NA   NA
 1203466 1294513   PMN2A_1318     FALSE 0.727 14.000 0.000 NA   NA
 1202594 1202595 PMN2A_1319 PMN2A_1320   mraY TRUE 0.829 17.000 0.027 NA   NA
 1202595 1202596 PMN2A_1320 PMN2A_1321 mraY   TRUE 0.781 18.000 0.011 NA   NA
 1202597 1202598 PMN2A_1322 PMN2A_1323 sps uvrA FALSE 0.024 200.000 0.003 1.000 N NA
 1202598 1202599 PMN2A_1323 PMN2A_1324 uvrA recN TRUE 0.968 45.000 0.021 0.070 Y NA
 1202600 1203467 PMN2A_1325 PMN2A_1326     TRUE 0.932 1.000 0.452 NA   NA
 1203467 1202601 PMN2A_1326 PMN2A_1327   thrC TRUE 0.822 27.000 0.050 NA   NA
 1202601 1202602 PMN2A_1327 PMN2A_1328 thrC dnaN FALSE 0.009 376.000 0.000 1.000 N NA