MicrobesOnline Operon Predictions for Escherichia coli S88

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 5868177 5868178 ECS88_5086 ECS88_0002 thrL thrA FALSE 0.245 81.000 0.043 1.000   NA
 5868178 5868179 ECS88_0002 ECS88_0003 thrA thrB TRUE 0.993 2.000 0.133 1.000 Y NA
 5868179 5868180 ECS88_0003 ECS88_0004 thrB thrC TRUE 0.996 1.000 0.233 1.000 Y NA
 5868180 5868181 ECS88_0004 ECS88_0005 thrC yaaX FALSE 0.017 214.000 0.003 NA   NA
 5868182 5868183 ECS88_0006 ECS88_0007 yaaA yaaJ FALSE 0.204 70.000 0.028 NA   NA
 5868184 5868185 ECS88_0009 ECS88_0010 talB mogA FALSE 0.097 115.000 0.042 1.000 N NA
 5868186 5868187 ECS88_0011 ECS88_0012 yaaH htpY FALSE 0.081 149.000 0.043 NA   NA
 5868187 5868188 ECS88_0012 ECS88_0013 htpY yaaI TRUE 0.955 26.000 0.500 NA   NA
 5868189 5868190 ECS88_0014 ECS88_misc_RNA_1 dnaK tpke11 TRUE 0.945 1.000 0.000 NA   NA
 5868190 5868191 ECS88_misc_RNA_1 ECS88_0015 tpke11 dnaJ TRUE 0.947 0.000 0.000 NA   NA
 5868193 5868194 ECS88_misc_RNA_2 ECS88_0017 sokC   FALSE 0.005 509.000 0.000 NA   NA
 5868194 5868195 ECS88_0017 ECS88_0018     TRUE 0.963 -16.000 0.571 NA   NA
 5868195 5868196 ECS88_0018 ECS88_0019     FALSE 0.162 123.000 0.000 NA   NA
 5868196 5868197 ECS88_0019 ECS88_0020   nhaA FALSE 0.025 235.000 0.000 NA   NA
 5868197 5868198 ECS88_0020 ECS88_0021 nhaA nhaR TRUE 0.649 60.000 0.292 1.000 N NA
 5868200 5868201 ECS88_0023 ECS88_0024 yaaY ribF TRUE 0.871 8.000 0.019 NA   NA
 5868201 5868202 ECS88_0024 ECS88_0025 ribF ileS TRUE 0.760 43.000 0.254 1.000 N NA
 5868202 5868203 ECS88_0025 ECS88_0026 ileS lspA TRUE 0.902 0.000 0.045 1.000 N NA
 5868203 5868204 ECS88_0026 ECS88_0027 lspA fkpB FALSE 0.293 108.000 0.154 1.000 N NA
 5868204 5868205 ECS88_0027 ECS88_0028 fkpB ispH TRUE 0.994 2.000 0.626 1.000 N NA
 5868205 5868206 ECS88_0028 ECS88_0029 ispH rihC FALSE 0.098 66.000 0.028 NA N NA
 5868206 5868207 ECS88_0029 ECS88_0030 rihC   TRUE 0.878 23.000 0.167 NA   NA
 5868207 5868208 ECS88_0030 ECS88_0031   dapB FALSE 0.093 161.000 0.000 1.000   NA
 5868208 5868209 ECS88_0031 ECS88_0032 dapB carA FALSE 0.031 455.000 0.034 1.000 Y NA
 5868209 5868210 ECS88_0032 ECS88_0033 carA carB TRUE 0.995 18.000 0.345 0.001 Y NA
 5868210 5868211 ECS88_0033 ECS88_0034 carB   FALSE 0.314 64.000 0.000 NA   NA
 5868211 5868212 ECS88_0034 ECS88_0035     FALSE 0.315 -94.000 0.000 NA   NA
 5868212 5868213 ECS88_0035 ECS88_0037   caiF FALSE 0.015 290.000 0.000 NA   NA
 5868214 5868215 ECS88_0038 ECS88_0039 caiE caiD TRUE 0.936 6.000 0.000 1.000   NA
 5868215 5868216 ECS88_0039 ECS88_0040 caiD caiC TRUE 0.995 1.000 0.000 0.023 Y NA
 5868216 5868217 ECS88_0040 ECS88_0041 caiC caiB TRUE 0.668 58.000 0.154 0.023 N NA
 5868217 5868218 ECS88_0041 ECS88_0042 caiB caiA TRUE 0.572 128.000 0.529 1.000 N NA
 5868218 5868219 ECS88_0042 ECS88_0043 caiA caiT TRUE 0.710 31.000 0.118 1.000 N NA
 5868220 5868221 ECS88_0044 ECS88_0045 fixA fixB TRUE 0.993 15.000 0.231 0.013 Y NA
 5868221 5868222 ECS88_0045 ECS88_0046 fixB fixC TRUE 0.878 51.000 0.000 0.053 Y NA
 5868222 5868223 ECS88_0046 ECS88_0047 fixC fixX TRUE 0.996 -3.000 0.167 0.053 Y NA
 5868223 5868224 ECS88_0047 ECS88_0048 fixX yaaU FALSE 0.258 59.000 0.000 1.000 N NA
 5868224 5868225 ECS88_0048 ECS88_0049 yaaU kefF FALSE 0.223 108.000 0.000 1.000   NA
 5868225 5868226 ECS88_0049 ECS88_0050 kefF kefC TRUE 0.983 -7.000 0.560 1.000   NA
 5868226 5868227 ECS88_0050 ECS88_0051 kefC folA FALSE 0.014 192.000 0.012 1.000 N NA
 5868227 5868228 ECS88_0051 ECS88_0052 folA   FALSE 0.271 86.000 0.000 1.000   NA
 5868228 5868229 ECS88_0052 ECS88_0053     FALSE 0.044 196.000 0.000 NA   NA
 5868230 5868231 ECS88_0054 ECS88_0055 apaH apaG TRUE 0.972 7.000 0.267 NA N NA
 5868231 5868232 ECS88_0055 ECS88_0056 apaG ksgA TRUE 0.913 3.000 0.078 NA N NA
 5868232 5868233 ECS88_0056 ECS88_0057 ksgA pdxA TRUE 0.967 -3.000 0.197 1.000 N NA
 5868233 5868234 ECS88_0057 ECS88_0058 pdxA surA TRUE 0.993 0.000 0.561 1.000 N NA
 5868234 5868235 ECS88_0058 ECS88_0059 surA imp TRUE 0.576 53.000 0.182 1.000 N NA
 5868237 5868238 ECS88_0061 ECS88_0062 rluA hepA TRUE 0.967 12.000 0.294 1.000 N NA
 5868238 5868239 ECS88_0062 ECS88_0063 hepA polB TRUE 0.510 164.000 0.098 0.069 Y NA
 5868239 5868240 ECS88_0063 ECS88_0064 polB araD FALSE 0.098 75.000 0.018 1.000 N NA
 5868240 5868241 ECS88_0064 ECS88_0065 araD araA FALSE 0.070 285.000 0.017 1.000 Y NA
 5868241 5868242 ECS88_0065 ECS88_0066 araA araB TRUE 0.933 11.000 0.138 1.000 N NA
 5868243 5868244 ECS88_0067 ECS88_0068 araC   FALSE 0.005 512.000 0.000 NA   NA
 5868244 5868245 ECS88_0068 ECS88_0069     TRUE 0.923 7.000 0.000 NA   NA
 5868245 5868246 ECS88_0069 ECS88_0070   yabI FALSE 0.087 155.000 0.000 NA   NA
 5868247 5868248 ECS88_0071 ECS88_0072 thiQ thiP TRUE 0.971 -16.000 0.522 0.018 N NA
 5868248 5868249 ECS88_0072 ECS88_0073 thiP tbpA TRUE 0.970 -24.000 0.697 0.077 N NA
 5868249 5868250 ECS88_0073 ECS88_misc_RNA_3 tbpA   TRUE 0.658 31.000 0.000 NA   NA
 5868250 5868251 ECS88_misc_RNA_3 ECS88_0074   sgrR TRUE 0.629 34.000 0.000 NA   NA
 5868252 5868253 ECS88_0075 ECS88_misc_RNA_4   sgrS FALSE 0.238 -152.000 0.000 NA   NA
 5868254 5868255 ECS88_0076 ECS88_0077 leuD leuC TRUE 0.997 11.000 0.309 0.001 Y NA
 5868255 5868256 ECS88_0077 ECS88_0078 leuC leuB TRUE 0.998 3.000 0.275 0.002 Y NA
 5868256 5868257 ECS88_0078 ECS88_0079 leuB leuA TRUE 0.997 0.000 0.126 0.002 Y NA
 5868257 5868258 ECS88_0079 ECS88_5087 leuA leuL TRUE 0.431 92.000 0.010 0.002   NA
 5868259 5868260 ECS88_0080 ECS88_0081 leuO ilvI FALSE 0.008 318.000 0.000 1.000 N NA
 5868260 5868261 ECS88_0081 ECS88_0082 ilvI ilvH TRUE 0.999 3.000 0.371 0.002 Y NA
 5868261 5868262 ECS88_0082 ECS88_0083 ilvH fruR FALSE 0.042 180.000 0.063 1.000 N NA
 5868262 5868263 ECS88_0083 ECS88_0084 fruR mraZ FALSE 0.005 602.000 0.000 NA   NA
 5868263 5868264 ECS88_0084 ECS88_0085 mraZ mraW TRUE 0.995 2.000 0.635 NA   NA
 5868264 5868265 ECS88_0085 ECS88_0086 mraW ftsL TRUE 0.973 -3.000 0.227 1.000 N NA
 5868265 5868266 ECS88_0086 ECS88_0087 ftsL ftsI TRUE 0.875 16.000 0.124 1.000 N NA
 5868266 5868267 ECS88_0087 ECS88_0088 ftsI murE TRUE 0.946 -13.000 0.059 1.000 Y NA
 5868267 5868268 ECS88_0088 ECS88_0089 murE murF TRUE 0.999 -3.000 0.569 0.002 Y NA
 5868268 5868269 ECS88_0089 ECS88_0090 murF mraY TRUE 0.996 -6.000 0.309 0.004 Y NA
 5868269 5868270 ECS88_0090 ECS88_0091 mraY murD TRUE 0.999 3.000 0.647 0.004 Y NA
 5868270 5868271 ECS88_0091 ECS88_0092 murD ftsW TRUE 0.993 0.000 0.297 0.003 N NA
 5868271 5868272 ECS88_0092 ECS88_0093 ftsW murG TRUE 0.993 -3.000 0.647 1.000 N NA
 5868272 5868273 ECS88_0093 ECS88_0094 murG murC TRUE 0.912 54.000 0.283 1.000 Y NA
 5868273 5868274 ECS88_0094 ECS88_0095 murC ddlB TRUE 0.991 -7.000 0.153 0.004 Y NA
 5868274 5868275 ECS88_0095 ECS88_0096 ddlB ftsQ TRUE 0.997 2.000 0.372 NA Y NA
 5868275 5868276 ECS88_0096 ECS88_0097 ftsQ ftsA TRUE 0.984 -3.000 0.389 NA N NA
 5868276 5868277 ECS88_0097 ECS88_0099 ftsA ftsZ TRUE 0.933 61.000 0.460 1.000 Y NA
 5868277 5868278 ECS88_0099 ECS88_0100 ftsZ lpxC FALSE 0.276 101.000 0.134 1.000 N NA
 5868278 5868279 ECS88_0100 ECS88_0101 lpxC secM FALSE 0.030 231.000 0.000 1.000   NA
 5868279 5868280 ECS88_0101 ECS88_0102 secM secA FALSE 0.376 62.000 0.065 1.000   NA
 5868280 5868281 ECS88_0102 ECS88_0103 secA mutT TRUE 0.494 60.000 0.168 1.000 N NA
 5868282 5868283 ECS88_0104 ECS88_0105 yacG yacF TRUE 0.984 10.000 0.356 NA   NA
 5868283 5868284 ECS88_0105 ECS88_0106 yacF coaE TRUE 0.967 0.000 0.110 NA   NA
 5868286 5868287 ECS88_0108 ECS88_0109 hofC hofB TRUE 0.993 -10.000 0.571 1.000 Y NA
 5868287 5868288 ECS88_0109 ECS88_0110 hofB ppdD TRUE 0.997 10.000 0.556 NA Y NA
 5868288 5868289 ECS88_0110 ECS88_0111 ppdD nadC FALSE 0.007 204.000 0.015 NA N NA
 5868290 5868291 ECS88_0112 ECS88_0113 ampD ampE TRUE 0.995 -3.000 0.249 1.000 Y NA
 5868293 5868294 ECS88_0115 ECS88_0116     TRUE 0.947 3.000 0.000 1.000   NA
 5868294 5868295 ECS88_0116 ECS88_0117     FALSE 0.072 168.000 0.000 NA   NA
 5868295 5868296 ECS88_0117 ECS88_0118     TRUE 0.945 1.000 0.000 NA   NA
 5868296 5868297 ECS88_0118 ECS88_0119     FALSE 0.074 167.000 0.000 NA   NA
 5868297 5868298 ECS88_0119 ECS88_0120     TRUE 0.447 48.000 0.000 NA   NA
 5868298 5868299 ECS88_0120 ECS88_0121   pdhR FALSE 0.007 456.000 0.000 1.000   NA
 5868300 5868301 ECS88_misc_RNA_5 ECS88_0122 tp2   TRUE 0.871 -4.000 0.000 NA   NA
 5868302 5868303 ECS88_0123 ECS88_0124 aceE aceF TRUE 0.987 15.000 0.220 1.000 Y NA
 5868303 5868304 ECS88_0124 ECS88_0125 aceF lpd TRUE 0.521 207.000 0.463 1.000 Y NA
 5868306 5868307 ECS88_0127 ECS88_0128 acnB yacL FALSE 0.070 175.000 0.068 NA   NA
 5868308 5868309 ECS88_0129 ECS88_0130 speD speE TRUE 0.982 16.000 0.162 1.000 Y NA
 5868309 5868310 ECS88_0130 ECS88_0131 speE yacC TRUE 0.591 106.000 0.354 NA   NA
 5868315 5868316 ECS88_0136 ECS88_0138 yadG yadH TRUE 0.998 -3.000 0.688 1.000 Y NA
 5868316 5868317 ECS88_0138 ECS88_0139 yadH yadI FALSE 0.100 105.000 0.037 1.000 N NA
 5868317 5868318 ECS88_0139 ECS88_0140 yadI yadE TRUE 0.862 64.000 0.222 1.000 Y NA
 5868321 5868322 ECS88_0143 ECS88_0144 panC panB TRUE 0.998 12.000 0.395 0.001 Y NA
 5868322 5868323 ECS88_0144 ECS88_0145 panB   FALSE 0.131 112.000 0.000 1.000 N NA
 5868323 5868324 ECS88_0145 ECS88_0146     TRUE 0.966 26.000 0.000 0.010 Y NA
 5868324 5868325 ECS88_0146 ECS88_0147     TRUE 0.980 27.000 0.571 0.010   NA
 5868325 5868326 ECS88_0147 ECS88_0148     TRUE 0.996 6.000 0.571 0.010   NA
 5868326 5868327 ECS88_0148 ECS88_0149   htrE TRUE 0.982 17.000 0.571 1.000   NA
 5868327 5868328 ECS88_0149 ECS88_0150 htrE ecpD TRUE 0.991 35.000 1.000 1.000 Y NA
 5868328 5868329 ECS88_0150 ECS88_0151 ecpD yadN TRUE 0.881 109.000 0.500 1.000 Y NA
 5868329 5868330 ECS88_0151 ECS88_0152 yadN folK FALSE 0.007 338.000 0.000 1.000 N NA
 5868330 5868331 ECS88_0152 ECS88_0153 folK pcnB TRUE 0.974 -3.000 0.234 1.000 N NA
 5868331 5868332 ECS88_0153 ECS88_0154 pcnB yadB TRUE 0.920 39.000 0.131 1.000 Y NA
 5868332 5868333 ECS88_0154 ECS88_0155 yadB dksA TRUE 0.800 37.000 0.231 1.000 N NA
 5868333 5868334 ECS88_0155 ECS88_0156 dksA sfsA FALSE 0.126 178.000 0.151 NA   NA
 5868334 5868335 ECS88_0156 ECS88_0157 sfsA ligT TRUE 0.825 15.000 0.045 NA   NA
 5868336 5868337 ECS88_0158 ECS88_0159 hrpB mrcB FALSE 0.327 94.000 0.158 1.000 N NA
 5868337 5868338 ECS88_0159 ECS88_0161 mrcB fhuA FALSE 0.020 220.000 0.000 1.000 N NA
 5868338 5868339 ECS88_0161 ECS88_0162 fhuA fhuC TRUE 0.877 51.000 0.156 1.000 Y NA
 5868339 5868340 ECS88_0162 ECS88_0163 fhuC fhuD TRUE 0.989 0.000 0.031 1.000 Y NA
 5868340 5868341 ECS88_0163 ECS88_0164 fhuD fhuB TRUE 0.987 -3.000 0.000 1.000 Y NA
 5868343 5868344 ECS88_0166 ECS88_0167 clcA yadR FALSE 0.185 82.000 0.031 NA   NA
 5868345 5868346 ECS88_0168 ECS88_0169 yadS btuF TRUE 0.806 38.000 0.213 NA   NA
 5868346 5868347 ECS88_0169 ECS88_0170 btuF pfs TRUE 0.807 -7.000 0.073 1.000 N NA
 5868348 5868349 ECS88_0171 ECS88_0172 dgt degP FALSE 0.153 130.000 0.101 1.000 N NA
 5868349 5868350 ECS88_0172 ECS88_0173 degP cdaR FALSE 0.045 178.000 0.080 NA N NA
 5868351 5868352 ECS88_0174 ECS88_0175 yaeH dapD FALSE 0.009 312.000 0.035 NA   NA
 5868352 5868353 ECS88_0175 ECS88_0176 dapD glnD TRUE 0.672 31.000 0.097 1.000 N NA
 5868353 5868354 ECS88_0176 ECS88_0177 glnD map TRUE 0.588 62.000 0.243 1.000 N NA
 5868355 5868356 ECS88_misc_RNA_6 ECS88_0179 t44 rpsB TRUE 0.697 27.000 0.000 NA   NA
 5868356 5868357 ECS88_0179 ECS88_0180 rpsB tsf TRUE 0.882 135.000 0.748 1.000 Y NA
 5868357 5868358 ECS88_0180 ECS88_0181 tsf pyrH FALSE 0.397 147.000 0.416 1.000 N NA
 5868358 5868359 ECS88_0181 ECS88_0182 pyrH frr TRUE 0.514 150.000 0.626 1.000 N NA
 5868359 5868360 ECS88_0182 ECS88_0183 frr dxr FALSE 0.101 92.000 0.032 1.000 N NA
 5868360 5868361 ECS88_0183 ECS88_0184 dxr ispU FALSE 0.214 186.000 0.025 1.000 Y NA
 5868361 5868362 ECS88_0184 ECS88_0185 ispU cdsA TRUE 0.994 13.000 0.400 1.000 Y NA
 5868362 5868363 ECS88_0185 ECS88_0186 cdsA yaeL TRUE 0.874 12.000 0.080 1.000 N NA
 5868363 5868364 ECS88_0186 ECS88_0187 yaeL yaeT TRUE 0.962 30.000 0.204 1.000 Y NA
 5868364 5868365 ECS88_0187 ECS88_0189 yaeT hlpA TRUE 0.809 122.000 0.354 1.000 Y NA
 5868365 5868366 ECS88_0189 ECS88_0190 hlpA lpxD TRUE 0.999 4.000 0.814 1.000 Y NA
 5868366 5868367 ECS88_0190 ECS88_0191 lpxD fabZ TRUE 0.772 105.000 0.796 1.000 N NA
 5868367 5868368 ECS88_0191 ECS88_0192 fabZ lpxA TRUE 0.995 4.000 0.850 1.000 N NA
 5868368 5868369 ECS88_0192 ECS88_0193 lpxA lpxB TRUE 0.997 0.000 0.289 1.000 Y NA
 5868369 5868370 ECS88_0193 ECS88_0194 lpxB rnhB TRUE 0.966 -3.000 0.186 1.000 N NA
 5868370 5868371 ECS88_0194 ECS88_0195 rnhB dnaE TRUE 0.917 37.000 0.104 1.000 Y NA
 5868371 5868372 ECS88_0195 ECS88_0196 dnaE accA TRUE 0.904 13.000 0.122 1.000 N NA
 5868372 5868373 ECS88_0196 ECS88_0197 accA ldcC FALSE 0.067 98.000 0.010 1.000 N NA
 5868373 5868374 ECS88_0197 ECS88_0198 ldcC yaeR TRUE 0.732 57.000 0.039 NA Y NA
 5868374 5868375 ECS88_0198 ECS88_0199 yaeR tilS FALSE 0.071 65.000 0.015 NA N NA
 5868376 5868377 ECS88_0200 ECS88_0201 rof yaeP TRUE 0.886 -13.000 0.179 NA   NA
 5868378 5868379 ECS88_0202 ECS88_0203 yaeQ yaeJ TRUE 0.918 -3.000 0.034 1.000   NA
 5868379 5868380 ECS88_0203 ECS88_0204 yaeJ nlpE TRUE 0.806 14.000 0.027 NA   NA
 5868381 5868382 ECS88_0205 ECS88_0206 yaeF proS FALSE 0.249 53.000 0.002 NA   NA
 5868382 5868383 ECS88_0206 ECS88_0207 proS yaeB FALSE 0.166 111.000 0.048 NA   NA
 5868383 5868384 ECS88_0207 ECS88_0208 yaeB rcsF TRUE 0.980 -3.000 0.247 NA   NA
 5868384 5868385 ECS88_0208 ECS88_0209 rcsF metQ TRUE 0.643 118.000 0.500 NA   NA
 5868385 5868386 ECS88_0209 ECS88_0210 metQ metI TRUE 0.980 40.000 0.411 0.059 Y NA
 5868386 5868387 ECS88_0210 ECS88_0211 metI metN TRUE 0.995 -7.000 0.584 1.000 Y NA
 5868388 5868389 ECS88_0212 ECS88_16S_3 gmhB   FALSE 0.009 366.000 0.000 NA   NA
 5868389 5868390 ECS88_16S_3 ECS88_tRNA1     FALSE 0.283 69.000 0.000 NA   NA
 5868390 5868391 ECS88_tRNA1 ECS88_tRNA2     TRUE 0.506 43.000 0.000 NA   NA
 5868391 5868392 ECS88_tRNA2 ECS88_23S_3     FALSE 0.064 175.000 0.000 NA   NA
 5868392 5868393 ECS88_23S_3 ECS88_5S_4     FALSE 0.209 99.000 0.000 NA   NA
 5868393 5868394 ECS88_5S_4 ECS88_tRNA3     FALSE 0.404 52.000 0.000 NA   NA
 5868394 5868395 ECS88_tRNA3 ECS88_0222   dkgB FALSE 0.079 163.000 0.000 NA   NA
 5868397 5868398 ECS88_0224 ECS88_0225 yafD yafE FALSE 0.269 78.000 0.066 NA   NA
 5868399 5868400 ECS88_0226 ECS88_0227 mltD gloB TRUE 0.596 72.000 0.233 1.000   NA
 5868403 5868404 ECS88_0230 ECS88_tRNA4 dnaQ   FALSE 0.134 133.000 0.000 NA   NA
 5868404 5868405 ECS88_tRNA4 ECS88_0231   yafT FALSE 0.011 329.000 0.000 NA   NA
 5868406 5868407 ECS88_0232 ECS88_0233     TRUE 0.972 -3.000 0.182 NA   NA
 5868407 5868408 ECS88_0233 ECS88_0234     TRUE 0.630 -130.000 0.312 NA   NA
 5868408 5868409 ECS88_0234 ECS88_0235     TRUE 0.983 20.000 0.750 NA   NA
 5868409 5868410 ECS88_0235 ECS88_0236     TRUE 0.917 -61.000 0.711 NA   NA
 5868410 5868411 ECS88_0236 ECS88_0237     TRUE 0.908 -3.000 0.039 NA   NA
 5868411 5868412 ECS88_0237 ECS88_0238     TRUE 0.988 10.000 0.471 NA   NA
 5868412 5868413 ECS88_0238 ECS88_0239     TRUE 0.994 5.000 0.673 NA   NA
 5868413 5868414 ECS88_0239 ECS88_0240     TRUE 0.996 3.000 0.765 NA   NA
 5868414 5868415 ECS88_0240 ECS88_0241     TRUE 0.996 -3.000 0.862 NA   NA
 5868415 5868416 ECS88_0241 ECS88_0242     TRUE 0.746 -145.000 0.510 NA   NA
 5868416 5868417 ECS88_0242 ECS88_0243     TRUE 0.957 -36.000 0.863 NA   NA
 5868417 5868418 ECS88_0243 ECS88_0244     TRUE 0.969 -12.000 0.552 NA   NA
 5868418 5868419 ECS88_0244 ECS88_0245     TRUE 0.994 5.000 0.627 NA   NA
 5868419 5868420 ECS88_0245 ECS88_0246     TRUE 0.980 23.000 0.821 NA   NA
 5868421 5868422 ECS88_0247 ECS88_0248     FALSE 0.030 221.000 0.000 NA   NA
 5868422 5868423 ECS88_0248 ECS88_0249     FALSE 0.198 107.000 0.000 NA   NA
 5868423 5868424 ECS88_0249 ECS88_0250     TRUE 0.840 -7.000 0.000 NA   NA
 5868424 5868425 ECS88_0250 ECS88_0251     TRUE 0.628 -25.000 0.000 NA   NA
 5868425 5868426 ECS88_0251 ECS88_0252     FALSE 0.020 258.000 0.000 NA   NA
 5868426 5868427 ECS88_0252 ECS88_0253     FALSE 0.208 100.000 0.000 NA   NA
 5868427 5868428 ECS88_0253 ECS88_0254     FALSE 0.027 229.000 0.000 NA   NA
 5868428 5868429 ECS88_0254 ECS88_0255     FALSE 0.279 70.000 0.000 NA   NA
 5868433 5868434 ECS88_0259 ECS88_0260 lpcA yafJ FALSE 0.134 205.000 0.229 1.000   NA
 5868436 5868437 ECS88_0262 ECS88_0263 yafL yafM FALSE 0.034 176.000 0.000 NA N NA
 5868439 5868440 ECS88_0265 ECS88_0266 mbhA dinB FALSE 0.200 71.000 0.000 1.000 N NA
 5868440 5868441 ECS88_0266 ECS88_0267 dinB yafN FALSE 0.260 52.000 0.000 NA N NA
 5868441 5868442 ECS88_0267 ECS88_0268 yafN yafO TRUE 0.992 3.000 0.500 NA   NA
 5868442 5868443 ECS88_0268 ECS88_0269 yafO yafP TRUE 0.913 10.000 0.000 NA   NA
 5868443 5868444 ECS88_0269 ECS88_0270 yafP   FALSE 0.062 178.000 0.000 NA   NA
 5868444 5868445 ECS88_0270 ECS88_0271   prfH TRUE 0.518 111.000 0.303 NA   NA
 5868447 5868448 ECS88_0273 ECS88_0274 gpt frsA FALSE 0.180 92.000 0.040 NA   NA
 5868448 5868449 ECS88_0274 ECS88_0275 frsA crl FALSE 0.317 58.000 0.048 NA   NA
 5868451 5868452 ECS88_0277 ECS88_0278 proB proA TRUE 0.990 12.000 0.026 0.001 Y NA
 5868452 5868453 ECS88_0278 ECS88_tRNA5 proA   FALSE 0.181 115.000 0.000 NA   NA
 5868453 5868454 ECS88_tRNA5 ECS88_0279     FALSE 0.087 155.000 0.000 NA   NA
 5868456 5868457 ECS88_0281 ECS88_0282     FALSE 0.040 302.000 0.000 0.009   NA
 5868457 5868458 ECS88_0282 ECS88_0283     FALSE 0.008 379.000 0.000 NA   NA
 5868458 5868459 ECS88_0283 ECS88_0284   yagU FALSE 0.033 215.000 0.000 NA   NA
 5868460 5868461 ECS88_0286 ECS88_0287 yagV yagW TRUE 0.937 -31.000 0.571 NA   NA
 5868461 5868462 ECS88_0287 ECS88_0288 yagW yagX TRUE 0.964 -10.000 0.429 NA   NA
 5868462 5868463 ECS88_0288 ECS88_0289 yagX yagY TRUE 0.920 26.000 0.308 NA   NA
 5868463 5868464 ECS88_0289 ECS88_0290 yagY ecpA TRUE 0.783 57.000 0.385 NA   NA
 5868464 5868465 ECS88_0290 ECS88_0291 ecpA ykgK TRUE 0.704 74.000 0.400 NA   NA
 5868465 5868466 ECS88_0291 ECS88_0292 ykgK ykgM FALSE 0.002 1176.000 0.000 1.000 N NA
 5868466 5868467 ECS88_0292 ECS88_0294 ykgM   FALSE 0.002 940.000 0.000 1.000 N NA
 5868467 5868468 ECS88_0294 ECS88_0295     FALSE 0.079 172.000 0.000 1.000   NA
 5868469 5868470 ECS88_0296 ECS88_0297     TRUE 0.650 125.000 0.000 0.062 Y NA
 5868471 5868472 ECS88_0298 ECS88_0299     TRUE 0.949 27.000 0.438 1.000   NA
 5868476 5868477 ECS88_0303 ECS88_0304 ykgB ykgI TRUE 0.868 12.000 0.043 NA   NA
 5868477 5868478 ECS88_0304 ECS88_0305 ykgI ykgC TRUE 0.758 109.000 0.667 NA   NA
 5868479 5868480 ECS88_0306 ECS88_0307 ykgD ykgE FALSE 0.003 527.000 0.000 NA N NA
 5868480 5868481 ECS88_0307 ECS88_0308 ykgE ykgF TRUE 0.993 11.000 0.286 NA Y NA
 5868481 5868482 ECS88_0308 ECS88_0309 ykgF ykgG TRUE 0.984 -7.000 0.286 0.001   NA
 5868483 5868484 ECS88_0310 ECS88_0311   ykgH TRUE 0.605 -28.000 0.000 NA   NA
 5868484 5868485 ECS88_0311 ECS88_0312 ykgH   FALSE 0.056 184.000 0.000 NA   NA
 5868485 5868486 ECS88_0312 ECS88_0313     TRUE 0.918 9.000 0.000 NA   NA
 5868486 5868487 ECS88_0313 ECS88_0315     FALSE 0.088 154.000 0.000 NA   NA
 5868487 5868488 ECS88_0315 ECS88_0317     FALSE 0.013 330.000 0.000 1.000   NA
 5868490 5868491 ECS88_0319 ECS88_0320 betA betB TRUE 0.985 14.000 0.634 1.000 N NA
 5868491 5868492 ECS88_0320 ECS88_0321 betB betI TRUE 0.976 14.000 0.459 1.000 N NA
 5868496 5868497 ECS88_0325 ECS88_0326 yahB yahC FALSE 0.221 92.000 0.000 NA   NA
 5868498 5868499 ECS88_0327 ECS88_0328 yahD yahE TRUE 0.941 40.000 0.667 NA   NA
 5868499 5868500 ECS88_0328 ECS88_0329 yahE yahF TRUE 0.964 -10.000 0.429 NA   NA
 5868500 5868501 ECS88_0329 ECS88_0330 yahF yahG TRUE 0.996 0.000 0.714 NA   NA
 5868501 5868502 ECS88_0330 ECS88_0331 yahG yahI FALSE 0.151 154.000 0.125 NA   NA
 5868502 5868503 ECS88_0331 ECS88_0332 yahI yahJ TRUE 0.972 10.000 0.278 1.000 N NA
 5868503 5868504 ECS88_0332 ECS88_0333 yahJ   FALSE 0.018 268.000 0.000 NA   NA
 5868504 5868505 ECS88_0333 ECS88_0334     FALSE 0.022 251.000 0.000 NA   NA
 5868505 5868506 ECS88_0334 ECS88_0335     TRUE 0.983 34.000 0.571 NA Y NA
 5868506 5868507 ECS88_0335 ECS88_0336     TRUE 0.996 -7.000 0.667 1.000 Y NA
 5868507 5868508 ECS88_0336 ECS88_0337     TRUE 0.993 -33.000 1.000 0.058 Y NA
 5868508 5868509 ECS88_0337 ECS88_0338   yahK FALSE 0.267 87.000 0.000 1.000   NA
 5868509 5868510 ECS88_0338 ECS88_tRNA6 yahK   FALSE 0.005 552.000 0.000 NA   NA
 5868510 5868511 ECS88_tRNA6 ECS88_0339   yahM TRUE 0.786 -10.000 0.000 NA   NA
 5868515 5868516 ECS88_0343 ECS88_0344 prpB prpC TRUE 0.874 45.000 0.502 1.000 N NA
 5868516 5868517 ECS88_0344 ECS88_0345 prpC prpD TRUE 0.859 34.000 0.216 1.000   NA
 5868517 5868518 ECS88_0345 ECS88_0346 prpD prpE TRUE 0.805 40.000 0.038 0.001   NA
 5868518 5868519 ECS88_0346 ECS88_0347 prpE codB FALSE 0.007 325.000 0.000 1.000 N NA
 5868519 5868520 ECS88_0347 ECS88_0348 codB codA TRUE 0.982 -10.000 0.250 1.000 Y NA
 5868521 5868522 ECS88_0349 ECS88_0350 lacA lacY TRUE 0.613 66.000 0.222 1.000   NA
 5868522 5868523 ECS88_0350 ECS88_0351 lacY lacZ TRUE 0.747 52.000 0.261 1.000   NA
 5868523 5868524 ECS88_0351 ECS88_0352 lacZ lacI FALSE 0.279 123.000 0.174 1.000 N NA
 5868526 5868527 ECS88_0355 ECS88_0356 frmB frmA TRUE 0.609 93.000 0.327 1.000   NA
 5868527 5868528 ECS88_0356 ECS88_0357 frmA frmR TRUE 0.938 35.000 0.531 NA   NA
 5868528 5868529 ECS88_0357 ECS88_0358 frmR yaiO FALSE 0.051 189.000 0.000 NA   NA
 5868529 5868530 ECS88_0358 ECS88_0359 yaiO yaiX TRUE 0.943 2.000 0.000 NA   NA
 5868530 5868531 ECS88_0359 ECS88_0360 yaiX yaiP FALSE 0.240 -151.000 0.000 NA   NA
 5868531 5868532 ECS88_0360 ECS88_0361 yaiP yaiS TRUE 0.971 10.000 0.214 NA   NA
 5868533 5868534 ECS88_0362 ECS88_0363 tauA tauB TRUE 0.975 13.000 0.047 1.000 Y NA
 5868534 5868535 ECS88_0363 ECS88_0364 tauB tauC TRUE 0.998 -3.000 0.728 1.000 Y NA
 5868535 5868536 ECS88_0364 ECS88_0365 tauC tauD TRUE 0.970 -3.000 0.214 1.000 N NA
 5868538 5868539 ECS88_0367 ECS88_0368   yaiV TRUE 0.938 41.000 0.667 NA   NA
 5868541 5868542 ECS88_0370 ECS88_0371   sbmA TRUE 0.791 20.000 0.000 NA   NA
 5868542 5868543 ECS88_0371 ECS88_0372 sbmA yaiW TRUE 0.876 13.000 0.000 NA   NA
 5868547 5868548 ECS88_0376 ECS88_0377 yaiB phoA FALSE 0.153 101.000 0.032 NA   NA
 5868548 5868549 ECS88_0377 ECS88_0378 phoA psiF FALSE 0.123 119.000 0.032 NA   NA
 5868549 5868550 ECS88_0378 ECS88_0379 psiF yaiC TRUE 0.495 102.000 0.250 NA   NA
 5868552 5868553 ECS88_0382 ECS88_0383 yaiI aroL FALSE 0.031 183.000 0.007 NA   NA
 5868553 5868554 ECS88_0383 ECS88_0384 aroL yaiA FALSE 0.375 50.000 0.044 NA   NA
 5868554 5868555 ECS88_0384 ECS88_0385 yaiA aroM FALSE 0.020 258.000 0.000 NA   NA
 5868555 5868556 ECS88_0385 ECS88_0386 aroM yaiE FALSE 0.243 72.000 0.049 NA   NA
 5868556 5868557 ECS88_0386 ECS88_0387 yaiE ykiA FALSE 0.036 208.000 0.000 NA   NA
 5868560 5868561 ECS88_0390 ECS88_0391 araJ sbcC FALSE 0.045 126.000 0.030 NA N NA
 5868561 5868562 ECS88_0391 ECS88_0392 sbcC sbcD TRUE 0.993 -3.000 0.021 0.001 Y NA
 5868563 5868564 ECS88_0393 ECS88_0394 phoB phoR TRUE 0.963 58.000 0.453 0.016 Y NA
 5868564 5868565 ECS88_0394 ECS88_0396 phoR brnQ FALSE 0.005 407.000 0.000 1.000 N NA
 5868565 5868566 ECS88_0396 ECS88_0397 brnQ proY TRUE 0.919 76.000 0.348 0.091 Y NA
 5868566 5868567 ECS88_0397 ECS88_0398 proY malZ FALSE 0.111 156.000 0.123 1.000 N NA
 5868569 5868570 ECS88_0400 ECS88_0401 queA tgt TRUE 0.967 55.000 0.360 0.001 Y NA
 5868570 5868571 ECS88_0401 ECS88_0402 tgt yajC TRUE 0.916 23.000 0.325 NA N NA
 5868571 5868572 ECS88_0402 ECS88_0403 yajC secD TRUE 0.915 28.000 0.045 NA Y NA
 5868572 5868573 ECS88_0403 ECS88_0404 secD secF TRUE 0.996 11.000 0.206 0.001 Y NA
 5868573 5868574 ECS88_0404 ECS88_0405 secF yajD FALSE 0.105 130.000 0.015 1.000   NA
 5868575 5868576 ECS88_0406 ECS88_0407 tsx yajI FALSE 0.014 298.000 0.000 NA   NA
 5868577 5868578 ECS88_0408 ECS88_0409 nrdR ribD TRUE 0.976 4.000 0.277 NA N NA
 5868578 5868579 ECS88_0409 ECS88_0410 ribD ribE TRUE 0.789 89.000 0.034 0.001 Y NA
 5868579 5868580 ECS88_0410 ECS88_0411 ribE nusB TRUE 0.946 20.000 0.347 1.000 N NA
 5868580 5868581 ECS88_0411 ECS88_0412 nusB thiL TRUE 0.481 78.000 0.225 1.000 N NA
 5868581 5868582 ECS88_0412 ECS88_0413 thiL pgpA TRUE 0.818 -22.000 0.206 1.000 N NA
 5868583 5868584 ECS88_0414 ECS88_0415 yajO dxs FALSE 0.140 55.000 0.009 1.000 N NA
 5868584 5868585 ECS88_0415 ECS88_0416 dxs ispA TRUE 0.940 25.000 0.060 1.000 Y NA
 5868585 5868586 ECS88_0416 ECS88_0417 ispA xseB TRUE 0.883 0.000 0.035 1.000 N NA
 5868588 5868589 ECS88_0420 ECS88_0421 yajL panE TRUE 0.728 -37.000 0.155 NA   NA
 5868591 5868592 ECS88_0423 ECS88_0424 yajR cyoE FALSE 0.054 149.000 0.061 NA N NA
 5868592 5868593 ECS88_0424 ECS88_0425 cyoE cyoD TRUE 0.954 12.000 0.118 0.091 N NA
 5868593 5868594 ECS88_0425 ECS88_0426 cyoD cyoC TRUE 0.999 0.000 0.485 0.051 Y NA
 5868594 5868595 ECS88_0426 ECS88_0427 cyoC cyoB TRUE 0.996 -10.000 0.697 0.051 Y NA
 5868595 5868596 ECS88_0427 ECS88_0428 cyoB cyoA TRUE 0.973 22.000 0.041 0.004 Y NA
 5868596 5868597 ECS88_0428 ECS88_0429 cyoA ampG FALSE 0.006 459.000 0.000 NA   NA
 5868597 5868598 ECS88_0429 ECS88_0430 ampG yajG TRUE 0.791 44.000 0.256 NA   NA
 5868599 5868600 ECS88_0431 ECS88_0432 bolA   TRUE 0.421 -66.000 0.000 NA   NA
 5868600 5868601 ECS88_0432 ECS88_0433   tig FALSE 0.103 147.000 0.000 NA   NA
 5868601 5868602 ECS88_0433 ECS88_0434 tig clpP FALSE 0.315 255.000 0.351 1.000 Y NA
 5868602 5868603 ECS88_0434 ECS88_0435 clpP clpX TRUE 0.794 126.000 0.352 1.000 Y NA
 5868605 5868606 ECS88_0436 ECS88_0437 lon hupB FALSE 0.024 209.000 0.000 1.000 N NA
 5868606 5868607 ECS88_0437 ECS88_0438 hupB ppiD FALSE 0.032 192.000 0.000 1.000 N NA
 5868607 5868608 ECS88_0438 ECS88_0439 ppiD ybaV FALSE 0.040 151.000 0.033 1.000 N NA
 5868608 5868609 ECS88_0439 ECS88_0440 ybaV ybaW FALSE 0.167 106.000 0.027 1.000   NA
 5868610 5868611 ECS88_0441 ECS88_0442 queC ybaE FALSE 0.246 65.000 0.019 1.000   NA
 5868612 5868613 ECS88_0443 ECS88_0444 cof ybaO FALSE 0.313 -75.000 0.020 1.000   NA
 5868613 5868614 ECS88_0444 ECS88_0445 ybaO mdlA TRUE 0.806 30.000 0.179 1.000 N NA
 5868614 5868615 ECS88_0445 ECS88_0446 mdlA mdlB TRUE 0.998 -7.000 0.911 0.007 Y NA
 5868615 5868616 ECS88_0446 ECS88_0447 mdlB glnK FALSE 0.022 181.000 0.028 1.000 N NA
 5868616 5868617 ECS88_0447 ECS88_0448 glnK amtB TRUE 0.779 30.000 0.156 1.000 N NA
 5868621 5868622 ECS88_0452 ECS88_misc_RNA_8   ffs FALSE 0.228 -188.000 0.000 NA   NA
 5868622 5868623 ECS88_misc_RNA_8 ECS88_0453 ffs ybaA FALSE 0.191 110.000 0.000 NA   NA
 5868624 5868625 ECS88_0454 ECS88_0455 ylaB ylaC FALSE 0.078 164.000 0.000 NA   NA
 5868625 5868626 ECS88_0455 ECS88_0456 ylaC maa FALSE 0.273 116.000 0.101 1.000   NA
 5868626 5868627 ECS88_0456 ECS88_0457 maa hha FALSE 0.066 174.000 0.000 NA   NA
 5868627 5868628 ECS88_0457 ECS88_0458 hha ybaJ FALSE 0.215 -220.000 0.000 NA   NA
 5868628 5868629 ECS88_0458 ECS88_0459 ybaJ acrB FALSE 0.005 545.000 0.000 NA   NA
 5868629 5868630 ECS88_0459 ECS88_0460 acrB acrA TRUE 0.950 23.000 0.458 1.000 N NA
 5868631 5868632 ECS88_0461 ECS88_0462 acrR kefA FALSE 0.082 128.000 0.000 NA N NA
 5868633 5868634 ECS88_0463 ECS88_0464 ybaM priC TRUE 0.981 14.000 0.474 NA   NA
 5868635 5868636 ECS88_0465 ECS88_0466 ybaN apt FALSE 0.073 153.000 0.043 NA   NA
 5868636 5868637 ECS88_0466 ECS88_0467 apt dnaX FALSE 0.139 129.000 0.088 1.000 N NA
 5868637 5868638 ECS88_0467 ECS88_0468 dnaX ybaB TRUE 0.817 53.000 0.411 NA   NA
 5868638 5868639 ECS88_0468 ECS88_0469 ybaB recR TRUE 0.995 0.000 0.604 NA   NA
 5868639 5868640 ECS88_0469 ECS88_0470 recR htpG FALSE 0.081 110.000 0.028 1.000 N NA
 5868640 5868641 ECS88_0470 ECS88_0471 htpG adk FALSE 0.073 181.000 0.035 0.100 N NA
 5868641 5868642 ECS88_0471 ECS88_0472 adk hemH FALSE 0.043 132.000 0.013 1.000 N NA
 5868645 5868646 ECS88_0475 ECS88_0476 ybaL fsr FALSE 0.012 239.000 0.000 NA N NA
 5868648 5868649 ECS88_misc_RNA_9 ECS88_0478 rybC   FALSE 0.239 86.000 0.000 NA   NA
 5868649 5868650 ECS88_0478 ECS88_0479     TRUE 0.928 -3.000 0.000 NA   NA
 5868650 5868651 ECS88_0479 ECS88_0480   ybaK TRUE 0.736 24.000 0.000 NA   NA
 5868654 5868655 ECS88_0483 ECS88_0484   ybaQ TRUE 0.868 36.000 0.286 NA   NA
 5868657 5868658 ECS88_0486 ECS88_0487 ybaS ybaT TRUE 0.987 3.000 0.028 1.000 Y NA
 5868658 5868659 ECS88_0487 ECS88_0488 ybaT cueR FALSE 0.109 125.000 0.000 1.000 N NA
 5868660 5868661 ECS88_0489 ECS88_0490     TRUE 0.928 -3.000 0.000 NA   NA
 5868661 5868662 ECS88_0490 ECS88_0491     FALSE 0.239 86.000 0.000 NA   NA
 5868664 5868665 ECS88_0493 ECS88_0494 ybbJ ybbK TRUE 0.997 0.000 0.313 NA Y NA
 5868666 5868667 ECS88_0495 ECS88_0496 ybbL ybbM TRUE 0.845 -13.000 0.127 NA   NA
 5868668 5868669 ECS88_0497 ECS88_0498 ybbN ybbO TRUE 0.495 61.000 0.118 1.000   NA
 5868669 5868670 ECS88_0498 ECS88_0499 ybbO tesA TRUE 0.832 -10.000 0.072 1.000   NA
 5868671 5868672 ECS88_0500 ECS88_0501 ybbA ybbP TRUE 0.998 -3.000 0.535 NA Y NA
 5868673 5868674 ECS88_0502 ECS88_0503 ybbB ybbS FALSE 0.179 69.000 0.012 NA   NA
 5868675 5868676 ECS88_0504 ECS88_0505 allA allR TRUE 0.772 78.000 0.625 1.000 N NA
 5868676 5868677 ECS88_0505 ECS88_0506 allR gcl FALSE 0.244 90.000 0.054 1.000   NA
 5868677 5868678 ECS88_0506 ECS88_0507 gcl hyi TRUE 0.897 13.000 0.065 1.000   NA
 5868678 5868679 ECS88_0507 ECS88_0508 hyi glxR FALSE 0.309 100.000 0.154 1.000 N NA
 5868679 5868680 ECS88_0508 ECS88_0510 glxR ybbW FALSE 0.048 170.000 0.000 1.000 N NA
 5868680 5868681 ECS88_0510 ECS88_0511 ybbW allB TRUE 0.841 60.000 0.161 1.000 Y NA
 5868681 5868682 ECS88_0511 ECS88_0512 allB ybbY TRUE 0.859 56.000 0.161 1.000 Y NA
 5868682 5868683 ECS88_0512 ECS88_0513 ybbY glxK TRUE 0.824 22.000 0.133 1.000 N NA
 5868684 5868685 ECS88_0514 ECS88_0515 ylbA allC TRUE 0.902 11.000 0.059 NA   NA
 5868685 5868686 ECS88_0515 ECS88_0516 allC allD TRUE 0.865 22.000 0.174 1.000 N NA
 5868687 5868688 ECS88_0517 ECS88_0518 fdrA ylbE TRUE 0.986 10.000 0.412 NA   NA
 5868688 5868689 ECS88_0518 ECS88_0519 ylbE ylbF TRUE 0.974 11.000 0.265 NA   NA
 5868689 5868690 ECS88_0519 ECS88_0520 ylbF ybcF TRUE 0.988 -3.000 0.375 NA   NA
 5868691 5868692 ECS88_0521 ECS88_0522 purK purE TRUE 0.996 -3.000 0.136 0.001 Y NA
 5868692 5868693 ECS88_0522 ECS88_0523 purE   FALSE 0.121 96.000 0.002 NA   NA
 5868693 5868694 ECS88_0523 ECS88_0524   lpxH FALSE 0.108 111.000 0.005 NA   NA
 5868694 5868695 ECS88_0524 ECS88_0525 lpxH ppiB TRUE 0.984 3.000 0.237 1.000   NA
 5868697 5868698 ECS88_0527 ECS88_0528 ybcI ybcJ FALSE 0.117 108.000 0.011 NA   NA
 5868698 5868699 ECS88_0528 ECS88_0529 ybcJ folD TRUE 0.948 2.000 0.055 1.000   NA
 5868700 5868701 ECS88_0530 ECS88_tRNA7     TRUE 0.640 33.000 0.000 NA   NA
 5868702 5868703 ECS88_0531 ECS88_0532 intD   FALSE 0.247 -144.000 0.000 NA   NA
 5868703 5868704 ECS88_0532 ECS88_0533   yfdT FALSE 0.351 -84.000 0.000 NA   NA
 5868704 5868705 ECS88_0533 ECS88_0534 yfdT yfdS TRUE 0.947 0.000 0.000 NA   NA
 5868705 5868706 ECS88_0534 ECS88_0535 yfdS yfdR TRUE 0.809 -9.000 0.000 NA   NA
 5868706 5868707 ECS88_0535 ECS88_0536 yfdR yfdQ FALSE 0.116 128.000 0.039 NA   NA
 5868707 5868708 ECS88_0536 ECS88_0537 yfdQ   TRUE 0.604 66.000 0.233 NA   NA
 5868708 5868709 ECS88_0537 ECS88_0538     FALSE 0.040 203.000 0.000 NA   NA
 5868709 5868710 ECS88_0538 ECS88_0539     FALSE 0.252 80.000 0.000 NA   NA
 5868711 5868712 ECS88_0540 ECS88_0541   ymfL TRUE 0.840 -7.000 0.000 NA   NA
 5868712 5868713 ECS88_0541 ECS88_0543 ymfL   TRUE 0.928 -3.000 0.000 NA   NA
 5868713 5868714 ECS88_0543 ECS88_0544     TRUE 0.928 -3.000 0.000 NA   NA
 5868714 5868715 ECS88_0544 ECS88_0545     TRUE 0.928 -3.000 0.000 NA   NA
 5868715 5868716 ECS88_0545 ECS88_0546     TRUE 0.521 -42.000 0.000 NA   NA
 5868716 5868717 ECS88_0546 ECS88_0547   yfdN TRUE 0.928 -3.000 0.000 NA   NA
 5868717 5868718 ECS88_0547 ECS88_0548 yfdN   TRUE 0.570 -33.000 0.000 NA   NA
 5868718 5868719 ECS88_0548 ECS88_0549     TRUE 0.939 -3.000 0.000 1.000   NA
 5868719 5868720 ECS88_0549 ECS88_0550     TRUE 0.939 -3.000 0.000 1.000   NA
 5868720 5868721 ECS88_0550 ECS88_0551     FALSE 0.094 151.000 0.000 NA   NA
 5868721 5868722 ECS88_0551 ECS88_0552     TRUE 0.943 2.000 0.000 NA   NA
 5868722 5868723 ECS88_0552 ECS88_0553     TRUE 0.938 3.000 0.000 NA   NA
 5868723 5868724 ECS88_0553 ECS88_0554     TRUE 0.434 49.000 0.000 NA   NA
 5868724 5868725 ECS88_0554 ECS88_0555     FALSE 0.017 279.000 0.000 NA   NA
 5868725 5868726 ECS88_0555 ECS88_0556     FALSE 0.128 135.000 0.000 NA   NA
 5868726 5868727 ECS88_0556 ECS88_tRNA8     TRUE 0.675 29.000 0.000 NA   NA
 5868727 5868728 ECS88_tRNA8 ECS88_tRNA9     TRUE 0.921 8.000 0.000 NA   NA
 5868728 5868729 ECS88_tRNA9 ECS88_tRNA10     TRUE 0.865 14.000 0.000 NA   NA
 5868729 5868730 ECS88_tRNA10 ECS88_0557     FALSE 0.006 492.000 0.000 NA   NA
 5868730 5868731 ECS88_0557 ECS88_0558     FALSE 0.124 137.000 0.000 NA   NA
 5868731 5868732 ECS88_0558 ECS88_0559     FALSE 0.254 -136.000 0.000 NA   NA
 5868732 5868733 ECS88_0559 ECS88_0560   essD FALSE 0.260 76.000 0.000 NA   NA
 5868733 5868734 ECS88_0560 ECS88_0561 essD   TRUE 0.943 2.000 0.000 NA   NA
 5868734 5868735 ECS88_0561 ECS88_0562   ydfQ FALSE 0.314 64.000 0.000 NA   NA
 5868735 5868736 ECS88_0562 ECS88_0563 ydfQ   FALSE 0.159 124.000 0.000 NA   NA
 5868736 5868737 ECS88_0563 ECS88_0564     TRUE 0.943 2.000 0.000 NA   NA
 5868737 5868738 ECS88_0564 ECS88_0565     FALSE 0.041 202.000 0.000 NA   NA
 5868738 5868739 ECS88_0565 ECS88_0566     FALSE 0.004 691.000 0.000 NA   NA
 5868740 5868741 ECS88_0567 ECS88_0568 ynfO   TRUE 0.837 16.000 0.000 NA   NA
 5868742 5868743 ECS88_0569 ECS88_0570     FALSE 0.402 -70.000 0.000 NA   NA
 5868743 5868744 ECS88_0570 ECS88_0571     FALSE 0.345 -85.000 0.000 NA   NA
 5868744 5868745 ECS88_0571 ECS88_0572     TRUE 0.712 -16.000 0.000 NA   NA
 5868745 5868746 ECS88_0572 ECS88_0573     TRUE 0.610 -33.000 0.000 1.000   NA
 5868746 5868747 ECS88_0573 ECS88_0574     TRUE 0.900 -10.000 0.150 1.000   NA
 5868747 5868748 ECS88_0574 ECS88_0575     TRUE 0.626 37.000 0.000 1.000   NA
 5868748 5868749 ECS88_0575 ECS88_0576     FALSE 0.353 58.000 0.000 NA   NA
 5868749 5868750 ECS88_0576 ECS88_0577     TRUE 0.932 4.000 0.000 NA   NA
 5868750 5868751 ECS88_0577 ECS88_0578     TRUE 0.509 -43.000 0.000 NA   NA
 5868751 5868752 ECS88_0578 ECS88_0579     TRUE 0.466 -54.000 0.000 NA   NA
 5868752 5868753 ECS88_0579 ECS88_0580     TRUE 0.928 -3.000 0.000 NA   NA
 5868753 5868754 ECS88_0580 ECS88_0581     TRUE 0.653 -22.000 0.000 NA   NA
 5868754 5868755 ECS88_0581 ECS88_0582     TRUE 0.837 16.000 0.000 NA   NA
 5868755 5868756 ECS88_0582 ECS88_0583     TRUE 0.967 -18.000 0.667 NA   NA
 5868756 5868757 ECS88_0583 ECS88_0584     TRUE 0.840 -7.000 0.000 NA   NA
 5868757 5868758 ECS88_0584 ECS88_0586     TRUE 0.928 -3.000 0.000 NA   NA
 5868758 5868759 ECS88_0586 ECS88_0587     TRUE 0.947 0.000 0.000 NA   NA
 5868759 5868760 ECS88_0587 ECS88_0588     FALSE 0.210 -250.000 0.000 NA   NA
 5868760 5868761 ECS88_0588 ECS88_0589     TRUE 0.898 -102.000 1.000 NA   NA
 5868761 5868762 ECS88_0589 ECS88_0590     FALSE 0.010 344.000 0.000 NA   NA
 5868762 5868763 ECS88_0590 ECS88_0591     FALSE 0.288 68.000 0.000 NA   NA
 5868763 5868764 ECS88_0591 ECS88_0592     FALSE 0.106 152.000 0.000 1.000   NA
 5868764 5868765 ECS88_0592 ECS88_0593     TRUE 0.928 -3.000 0.000 NA   NA
 5868765 5868766 ECS88_0593 ECS88_0594     TRUE 0.913 10.000 0.000 NA   NA
 5868767 5868768 ECS88_0595 ECS88_0596 ybcY   FALSE 0.005 630.000 0.000 1.000   NA
 5868768 5868769 ECS88_0596 ECS88_0597   ompT FALSE 0.133 187.000 0.000 0.024   NA
 5868769 5868770 ECS88_0597 ECS88_0598 ompT   FALSE 0.006 475.000 0.000 NA   NA
 5868770 5868771 ECS88_0598 ECS88_0599     TRUE 0.475 -52.000 0.000 NA   NA
 5868773 5868774 ECS88_0601 ECS88_0602 ybcY ompT FALSE 0.015 316.000 0.000 1.000   NA
 5868774 5868775 ECS88_0602 ECS88_0603 ompT ybcH FALSE 0.004 658.000 0.000 NA   NA
 5868775 5868776 ECS88_0603 ECS88_0604 ybcH nfrA TRUE 0.993 1.000 0.500 NA   NA
 5868776 5868777 ECS88_0604 ECS88_0605 nfrA nfrB TRUE 0.884 -13.000 0.159 1.000   NA
 5868777 5868778 ECS88_0605 ECS88_0606 nfrB cusS FALSE 0.145 150.000 0.000 0.098 N NA
 5868778 5868779 ECS88_0606 ECS88_0607 cusS cusR TRUE 0.997 -10.000 0.600 0.001 Y NA
 5868780 5868781 ECS88_0609 ECS88_0610 cusC cusF TRUE 0.960 24.000 0.500 NA   NA
 5868781 5868782 ECS88_0610 ECS88_0611 cusF cusB TRUE 0.837 16.000 0.000 NA   NA
 5868782 5868783 ECS88_0611 ECS88_0612 cusB cusA TRUE 0.983 12.000 0.500 1.000 N NA
 5868783 5868784 ECS88_0612 ECS88_0613 cusA pheP FALSE 0.295 102.000 0.000 0.089 N NA
 5868785 5868786 ECS88_0614 ECS88_0615 ybdG nfnB FALSE 0.038 108.000 0.012 NA N NA
 5868786 5868787 ECS88_0615 ECS88_0616 nfnB ybdF TRUE 0.747 79.000 0.500 NA   NA
 5868787 5868788 ECS88_0616 ECS88_0617 ybdF ybdJ FALSE 0.307 65.000 0.000 NA   NA
 5868788 5868789 ECS88_0617 ECS88_0618 ybdJ ybdK FALSE 0.299 66.000 0.000 NA   NA
 5868791 5868792 ECS88_0621 ECS88_0622 entD fepA TRUE 0.490 166.000 0.700 1.000 N NA
 5868793 5868794 ECS88_0623 ECS88_0624 fes ybdZ TRUE 0.987 3.000 0.320 NA   NA
 5868794 5868795 ECS88_0624 ECS88_0625 ybdZ entF TRUE 0.942 -3.000 0.080 NA   NA
 5868795 5868796 ECS88_0625 ECS88_0626 entF fepE FALSE 0.022 216.000 0.000 1.000 N NA
 5868797 5868798 ECS88_0627 ECS88_0628 fepC fepG TRUE 0.986 -3.000 0.038 1.000 Y NA
 5868798 5868799 ECS88_0628 ECS88_0629 fepG fepD TRUE 0.992 -3.000 0.000 0.056 Y NA
 5868802 5868803 ECS88_0632 ECS88_0633 entC entE TRUE 0.998 10.000 0.667 1.000 Y NA
 5868803 5868804 ECS88_0633 ECS88_0634 entE entB TRUE 0.997 14.000 0.667 1.000 Y NA
 5868804 5868805 ECS88_0634 ECS88_0635 entB entA TRUE 0.989 0.000 0.024 1.000 Y NA
 5868805 5868806 ECS88_0635 ECS88_0636 entA ybdB TRUE 0.988 3.000 0.065 NA Y NA
 5868806 5868807 ECS88_0636 ECS88_0637 ybdB cstA FALSE 0.129 181.000 0.222 NA N NA
 5868807 5868808 ECS88_0637 ECS88_0638 cstA ybdD TRUE 0.543 113.000 0.333 NA   NA
 5868810 5868811 ECS88_0640 ECS88_0641 ybdL ybdL TRUE 0.454 -57.000 0.000 NA   NA
 5868812 5868813 ECS88_0642 ECS88_0643 ibrB ibrA TRUE 0.655 -27.000 0.000 1.000   NA
 5868813 5868814 ECS88_0643 ECS88_0644 ibrA ybdO FALSE 0.401 147.000 0.333 1.000   NA
 5868814 5868815 ECS88_0644 ECS88_0645 ybdO dsbG FALSE 0.053 169.000 0.067 1.000 N NA
 5868816 5868817 ECS88_0647 ECS88_0648 ahpC ahpF TRUE 0.850 171.000 0.551 0.001 Y NA
 5868818 5868819 ECS88_0649 ECS88_0650 uspG   FALSE 0.159 124.000 0.000 NA   NA
 5868819 5868820 ECS88_0650 ECS88_0651   rnk FALSE 0.111 143.000 0.000 NA   NA
 5868820 5868821 ECS88_0651 ECS88_0652 rnk rna FALSE 0.008 230.000 0.018 1.000 N NA
 5868821 5868822 ECS88_0652 ECS88_0653 rna citT FALSE 0.070 114.000 0.024 1.000 N NA
 5868822 5868823 ECS88_0653 ECS88_0654 citT citG TRUE 0.614 51.000 0.194 1.000 N NA
 5868823 5868824 ECS88_0654 ECS88_0655 citG citX TRUE 0.976 -25.000 0.400 1.000 Y NA
 5868824 5868825 ECS88_0655 ECS88_0656 citX citF TRUE 0.901 4.000 0.000 1.000 N NA
 5868825 5868826 ECS88_0656 ECS88_0657 citF citE TRUE 0.964 11.000 0.000 0.001 N NA
 5868826 5868827 ECS88_0657 ECS88_0658 citE citD TRUE 0.996 -3.000 0.537 0.001 N NA
 5868827 5868828 ECS88_0658 ECS88_0659 citD citC TRUE 0.972 15.000 0.000 1.000 Y NA
 5868829 5868830 ECS88_0660 ECS88_0661 citA citB TRUE 0.896 -31.000 0.000 1.000 Y NA
 5868832 5868833 ECS88_0664 ECS88_0665 crcA cspE FALSE 0.286 175.000 0.333 1.000   NA
 5868835 5868836 ECS88_0667 ECS88_0668 ybeM tatE FALSE 0.352 129.000 0.196 1.000   NA
 5868837 5868838 ECS88_0669 ECS88_0670 lipA ybeF FALSE 0.026 232.000 0.000 NA   NA
 5868838 5868839 ECS88_0670 ECS88_0671 ybeF lipB FALSE 0.007 412.000 0.000 NA   NA
 5868839 5868840 ECS88_0671 ECS88_0672 lipB ybeD TRUE 0.460 101.000 0.219 NA   NA
 5868840 5868841 ECS88_0672 ECS88_0673 ybeD dacA FALSE 0.230 110.000 0.081 NA   NA
 5868841 5868842 ECS88_0673 ECS88_0675 dacA rlpA TRUE 0.779 140.000 0.475 NA Y NA
 5868842 5868843 ECS88_0675 ECS88_0676 rlpA mrdB TRUE 0.735 11.000 0.035 NA N NA
 5868843 5868844 ECS88_0676 ECS88_0677 mrdB mrdA TRUE 0.888 3.000 0.046 1.000 N NA
 5868844 5868845 ECS88_0677 ECS88_0678 mrdA ybeA TRUE 0.568 31.000 0.031 NA   NA
 5868845 5868846 ECS88_0678 ECS88_0679 ybeA ybeB TRUE 0.985 4.000 0.307 NA   NA
 5868846 5868847 ECS88_0679 ECS88_0680 ybeB phpB FALSE 0.020 260.000 0.000 NA   NA
 5868847 5868848 ECS88_0680 ECS88_0681 phpB nadD TRUE 0.636 24.000 0.057 1.000 N NA
 5868848 5868849 ECS88_0681 ECS88_0682 nadD holA TRUE 0.894 2.000 0.045 1.000 N NA
 5868849 5868850 ECS88_0682 ECS88_0683 holA rlpB TRUE 0.973 0.000 0.199 NA N NA
 5868850 5868851 ECS88_0683 ECS88_0684 rlpB leuS TRUE 0.916 15.000 0.182 NA N NA
 5868853 5868854 ECS88_0686 ECS88_0687 rihA gltL FALSE 0.294 118.000 0.195 NA N NA
 5868854 5868855 ECS88_0687 ECS88_0688 gltL gltK TRUE 0.998 0.000 0.379 1.000 Y NA
 5868855 5868856 ECS88_0688 ECS88_0689 gltK gltJ TRUE 0.999 0.000 0.933 0.017 Y NA
 5868856 5868857 ECS88_0689 ECS88_misc_RNA_11 gltJ   TRUE 0.890 12.000 0.000 NA   NA
 5868857 5868858 ECS88_misc_RNA_11 ECS88_0690   gltI TRUE 0.945 1.000 0.000 NA   NA
 5868860 5868861 ECS88_0692 ECS88_0693 lnt ybeX TRUE 0.956 25.000 0.557 1.000 N NA
 5868861 5868862 ECS88_0693 ECS88_0694 ybeX ybeY FALSE 0.389 90.000 0.150 NA   NA
 5868862 5868863 ECS88_0694 ECS88_0695 ybeY ybeZ TRUE 0.990 -3.000 0.457 NA   NA
 5868863 5868864 ECS88_0695 ECS88_0696 ybeZ miaB FALSE 0.367 114.000 0.220 1.000 N NA
 5868866 5868867 ECS88_tRNA91 ECS88_tRNA90     TRUE 0.569 38.000 0.000 NA   NA
 5868867 5868868 ECS88_tRNA90 ECS88_tRNA89     TRUE 0.434 49.000 0.000 NA   NA
 5868868 5868869 ECS88_tRNA89 ECS88_tRNA88     TRUE 0.837 16.000 0.000 NA   NA
 5868869 5868870 ECS88_tRNA88 ECS88_tRNA87     TRUE 0.615 35.000 0.000 NA   NA
 5868872 5868873 ECS88_tRNA86 ECS88_tRNA85     TRUE 0.903 11.000 0.000 NA   NA
 5868873 5868874 ECS88_tRNA85 ECS88_0699   asnB FALSE 0.008 381.000 0.000 NA   NA
 5868874 5868875 ECS88_0699 ECS88_0700 asnB nagD FALSE 0.014 256.000 0.000 1.000 N NA
 5868875 5868876 ECS88_0700 ECS88_0701 nagD nagC TRUE 0.839 48.000 0.070 1.000 Y NA
 5868876 5868877 ECS88_0701 ECS88_0702 nagC nagA TRUE 0.998 9.000 0.571 1.000 Y NA
 5868877 5868878 ECS88_0702 ECS88_0703 nagA nagB TRUE 0.975 60.000 0.557 0.001 Y NA
 5868880 5868881 ECS88_0705 ECS88_0706     FALSE 0.330 -90.000 0.000 NA   NA
 5868881 5868882 ECS88_0706 ECS88_0707     FALSE 0.214 -232.000 0.000 NA   NA
 5868882 5868883 ECS88_0707 ECS88_0708     TRUE 0.989 -3.000 0.092 NA Y NA
 5868883 5868884 ECS88_0708 ECS88_0709   ygdQ FALSE 0.307 65.000 0.000 NA   NA
 5868884 5868885 ECS88_0709 ECS88_0710 ygdQ ygdQ FALSE 0.320 -93.000 0.000 NA   NA
 5868885 5868886 ECS88_0710 ECS88_0711 ygdQ dapA FALSE 0.338 60.000 0.000 NA   NA
 5868886 5868887 ECS88_0711 ECS88_0712 dapA   TRUE 0.984 4.000 0.208 0.061 N NA
 5868888 5868889 ECS88_0713 ECS88_0714     TRUE 0.969 -7.000 0.361 NA   NA
 5868889 5868890 ECS88_0714 ECS88_0715     TRUE 0.992 2.000 0.533 1.000 N NA
 5868890 5868891 ECS88_0715 ECS88_0716   glnS FALSE 0.020 220.000 0.000 1.000 N NA
 5868891 5868892 ECS88_0716 ECS88_0717 glnS ybfM FALSE 0.007 449.000 0.000 1.000   NA
 5868892 5868893 ECS88_0717 ECS88_0718 ybfM ybfN TRUE 0.422 50.000 0.000 NA   NA
 5868896 5868897 ECS88_0721 ECS88_0722 fldA ybfE TRUE 0.538 140.000 0.473 1.000   NA
 5868897 5868898 ECS88_0722 ECS88_0723 ybfE ybfF FALSE 0.353 140.000 0.276 NA   NA
 5868899 5868900 ECS88_0724 ECS88_0725 seqA pgm TRUE 0.803 26.000 0.151 1.000 N NA
 5868901 5868902 ECS88_0726 ECS88_0727 potE speF TRUE 0.989 -3.000 0.087 1.000 Y NA
 5868902 5868903 ECS88_0727 ECS88_0728 speF kdpE FALSE 0.003 689.000 0.000 1.000 N NA
 5868903 5868904 ECS88_0728 ECS88_0729 kdpE kdpD TRUE 0.997 -3.000 0.385 1.000 Y NA
 5868904 5868905 ECS88_0729 ECS88_0730 kdpD kdpC TRUE 0.852 -7.000 0.100 1.000 N NA
 5868905 5868906 ECS88_0730 ECS88_0731 kdpC kdpB TRUE 0.999 9.000 0.877 0.001 Y NA
 5868906 5868907 ECS88_0731 ECS88_0732 kdpB kdpA TRUE 0.988 23.000 0.201 0.001 Y NA
 5868907 5868908 ECS88_0732 ECS88_0733 kdpA kdpF TRUE 0.982 0.000 0.022 0.001   NA
 5868909 5868910 ECS88_0734 ECS88_0735 ybfA ybgA TRUE 0.478 101.000 0.231 NA   NA
 5868910 5868911 ECS88_0735 ECS88_0736 ybgA phr TRUE 0.884 -3.000 0.019 NA   NA
 5868913 5868914 ECS88_0738 ECS88_0739 ybgI ybgJ TRUE 0.722 23.000 0.050 NA   NA
 5868914 5868915 ECS88_0739 ECS88_0740 ybgJ ybgK TRUE 0.993 -6.000 0.379 NA Y NA
 5868915 5868916 ECS88_0740 ECS88_0741 ybgK ybgL TRUE 0.920 -10.000 0.211 NA   NA
 5868916 5868917 ECS88_0741 ECS88_0742 ybgL nei TRUE 0.577 36.000 0.037 1.000   NA
 5868918 5868919 ECS88_0743 ECS88_0744 abrB ybgO FALSE 0.091 152.000 0.000 NA   NA
 5868919 5868920 ECS88_0744 ECS88_0745 ybgO gltA FALSE 0.101 148.000 0.000 NA   NA
 5868921 5868922 ECS88_0747 ECS88_0748 sdhC sdhD TRUE 0.997 -6.000 0.453 0.001 Y NA
 5868922 5868923 ECS88_0748 ECS88_0749 sdhD sdhA TRUE 0.999 0.000 0.705 0.002 Y NA
 5868923 5868924 ECS88_0749 ECS88_0750 sdhA sdhB TRUE 0.998 16.000 0.604 0.002 Y NA
 5868924 5868925 ECS88_0750 ECS88_0751 sdhB sucA FALSE 0.055 361.000 0.067 1.000 Y NA
 5868925 5868926 ECS88_0751 ECS88_0752 sucA sucB TRUE 0.996 15.000 0.667 1.000 Y NA
 5868926 5868927 ECS88_0752 ECS88_0753 sucB sucC TRUE 0.717 94.000 0.136 1.000 Y NA
 5868927 5868928 ECS88_0753 ECS88_0754 sucC sucD TRUE 1.000 0.000 0.806 0.001 Y NA
 5868928 5868929 ECS88_0754 ECS88_misc_RNA_12 sucD rybD TRUE 0.945 1.000 0.000 NA   NA
 5868929 5868930 ECS88_misc_RNA_12 ECS88_0755 rybD   FALSE 0.119 139.000 0.000 NA   NA
 5868930 5868931 ECS88_0755 ECS88_0756   cydA FALSE 0.004 1330.000 0.000 1.000   NA
 5868931 5868932 ECS88_0756 ECS88_0757 cydA cydB TRUE 0.982 16.000 0.000 0.049 Y NA
 5868932 5868933 ECS88_0757 ECS88_0758 cydB ybgE FALSE 0.207 128.000 0.100 NA   NA
 5868933 5868934 ECS88_0758 ECS88_0759 ybgE ybgC FALSE 0.133 150.000 0.095 NA   NA
 5868934 5868935 ECS88_0759 ECS88_0760 ybgC tolQ TRUE 0.994 -3.000 0.593 1.000   NA
 5868935 5868936 ECS88_0760 ECS88_0761 tolQ tolR TRUE 0.999 4.000 0.556 0.072 Y NA
 5868936 5868937 ECS88_0761 ECS88_0762 tolR tolA FALSE 0.316 65.000 0.114 NA N NA
 5868937 5868938 ECS88_0762 ECS88_0763 tolA tolB FALSE 0.062 133.000 0.051 NA N NA
 5868938 5868939 ECS88_0763 ECS88_0764 tolB pal TRUE 0.935 35.000 0.592 1.000 N NA
 5868939 5868940 ECS88_0764 ECS88_0765 pal ybgF TRUE 0.943 10.000 0.088 1.000   NA
 5868940 5868941 ECS88_0765 ECS88_tRNA11 ybgF   FALSE 0.076 165.000 0.000 NA   NA
 5868941 5868942 ECS88_tRNA11 ECS88_tRNA12     TRUE 0.603 36.000 0.000 NA   NA
 5868942 5868943 ECS88_tRNA12 ECS88_tRNA13     TRUE 0.938 3.000 0.000 NA   NA
 5868943 5868944 ECS88_tRNA13 ECS88_tRNA14     FALSE 0.404 52.000 0.000 NA   NA
 5868944 5868945 ECS88_tRNA14 ECS88_tRNA15     TRUE 0.932 4.000 0.000 NA   NA
 5868945 5868946 ECS88_tRNA15 ECS88_tRNA16     TRUE 0.434 49.000 0.000 NA   NA
 5868946 5868947 ECS88_tRNA16 ECS88_tRNA17     TRUE 0.629 34.000 0.000 NA   NA
 5868947 5868948 ECS88_tRNA17 ECS88_0766   nadA FALSE 0.017 278.000 0.000 NA   NA
 5868948 5868949 ECS88_0766 ECS88_0767 nadA pnuC TRUE 0.864 38.000 0.023 1.000 Y NA
 5868950 5868951 ECS88_0768 ECS88_0769 zitB ybgS FALSE 0.178 114.000 0.057 NA   NA
 5868953 5868954 ECS88_0771 ECS88_0772 gpmA galM FALSE 0.157 203.000 0.009 1.000 Y NA
 5868954 5868955 ECS88_0772 ECS88_0773 galM galK TRUE 0.991 -6.000 0.083 0.001 Y NA
 5868955 5868956 ECS88_0773 ECS88_0774 galK galT TRUE 0.994 4.000 0.370 0.001 N NA
 5868956 5868957 ECS88_0774 ECS88_0775 galT galE TRUE 0.966 10.000 0.053 0.001 N NA
 5868957 5868958 ECS88_0775 ECS88_0776 galE modF FALSE 0.015 263.000 0.023 1.000   NA
 5868958 5868959 ECS88_0776 ECS88_0777 modF modE FALSE 0.399 68.000 0.009 0.096   NA
 5868960 5868961 ECS88_0778 ECS88_0779 ybhT modA FALSE 0.084 167.000 0.072 NA   NA
 5868961 5868962 ECS88_0779 ECS88_0780 modA modB TRUE 0.999 0.000 0.627 0.001 Y NA
 5868962 5868963 ECS88_0780 ECS88_0781 modB modC TRUE 0.999 3.000 0.537 0.001 Y NA
 5868967 5868968 ECS88_0785 ECS88_0786 ybhH ybhI FALSE 0.260 76.000 0.000 NA   NA
 5868968 5868969 ECS88_0786 ECS88_0787 ybhI ybhI TRUE 0.923 7.000 0.000 NA   NA
 5868969 5868970 ECS88_0787 ECS88_0788 ybhI ybhJ FALSE 0.057 183.000 0.000 NA   NA
 5868971 5868972 ECS88_0789 ECS88_0790 ybhC ybhB FALSE 0.091 152.000 0.000 NA   NA
 5868972 5868973 ECS88_0790 ECS88_0791 ybhB bioA FALSE 0.213 59.000 0.003 NA   NA
 5868974 5868975 ECS88_0792 ECS88_0793 bioB bioF TRUE 0.997 -3.000 0.168 0.002 Y NA
 5868975 5868976 ECS88_0793 ECS88_0794 bioF bioC TRUE 0.924 -13.000 0.133 0.002 N NA
 5868976 5868977 ECS88_0794 ECS88_0795 bioC bioD TRUE 0.928 -7.000 0.054 0.002 N NA
 5868977 5868978 ECS88_0795 ECS88_0796 bioD uvrB FALSE 0.008 579.000 0.000 0.096 N NA
 5868980 5868981 ECS88_0798 ECS88_0799 moaA moaB TRUE 0.982 22.000 0.108 0.003 Y NA
 5868981 5868982 ECS88_0799 ECS88_0800 moaB moaC TRUE 0.996 3.000 0.109 0.003 Y NA
 5868982 5868983 ECS88_0800 ECS88_0801 moaC moaD TRUE 0.992 -7.000 0.175 0.003 Y NA
 5868983 5868984 ECS88_0801 ECS88_0802 moaD moaE TRUE 0.999 2.000 0.501 0.003 Y NA
 5868984 5868985 ECS88_0802 ECS88_0803 moaE ybhL FALSE 0.082 137.000 0.025 NA   NA
 5868985 5868986 ECS88_0803 ECS88_0805 ybhL ybhM FALSE 0.028 206.000 0.037 NA   NA
 5868987 5868988 ECS88_0806 ECS88_0807 ybhN ybhO TRUE 0.953 0.000 0.071 NA   NA
 5868988 5868989 ECS88_0807 ECS88_0808 ybhO ybhP TRUE 0.986 -3.000 0.333 NA   NA
 5868991 5868992 ECS88_0810 ECS88_0811 ybhR ybhS TRUE 0.999 11.000 0.609 0.007 Y NA
 5868992 5868993 ECS88_0811 ECS88_0812 ybhS ybhF TRUE 0.989 -7.000 0.547 0.096   NA
 5868993 5868994 ECS88_0812 ECS88_0813 ybhF ybhG TRUE 0.982 -7.000 0.545 1.000   NA
 5868994 5868995 ECS88_0813 ECS88_0814 ybhG ybiH TRUE 0.981 0.000 0.236 1.000 N NA
 5868998 5868999 ECS88_0817 ECS88_0818 dinG ybiB TRUE 0.510 28.000 0.041 1.000 N NA
 5868999 5869000 ECS88_0818 ECS88_0819 ybiB ybiC FALSE 0.180 141.000 0.000 0.061 N NA
 5869001 5869002 ECS88_0820 ECS88_0821 ybiJ ybiI FALSE 0.012 265.000 0.027 NA   NA
 5869002 5869003 ECS88_0821 ECS88_0822 ybiI ybiX FALSE 0.299 74.000 0.000 1.000   NA
 5869003 5869004 ECS88_0822 ECS88_0823 ybiX fiu FALSE 0.086 216.000 0.171 1.000   NA
 5869004 5869005 ECS88_0823 ECS88_0824 fiu ybiM FALSE 0.019 265.000 0.000 NA   NA
 5869007 5869008 ECS88_0826 ECS88_0827 ybiO glnQ FALSE 0.099 117.000 0.000 NA N NA
 5869008 5869009 ECS88_0827 ECS88_0828 glnQ glnP TRUE 0.986 -3.000 0.038 1.000 Y NA
 5869009 5869010 ECS88_0828 ECS88_0829 glnP glnH TRUE 0.558 139.000 0.051 0.071 Y NA
 5869010 5869011 ECS88_0829 ECS88_0830 glnH dps FALSE 0.005 404.000 0.000 1.000 N NA
 5869011 5869012 ECS88_0830 ECS88_0831 dps rhtA FALSE 0.011 299.000 0.044 NA   NA
 5869014 5869015 ECS88_0833 ECS88_0834 ybiP   FALSE 0.018 272.000 0.000 NA   NA
 5869015 5869016 ECS88_0834 ECS88_misc_RNA_13   rybA TRUE 0.499 -45.000 0.000 NA   NA
 5869017 5869018 ECS88_0835 ECS88_0836 mntR ybiR TRUE 0.789 -3.000 0.014 1.000 N NA
 5869021 5869022 ECS88_0839 ECS88_0840 ybiV ybiW FALSE 0.122 146.000 0.000 1.000   NA
 5869022 5869023 ECS88_0840 ECS88_0841 ybiW ybiY TRUE 0.991 6.000 0.316 0.004 N NA
 5869025 5869026 ECS88_0843 ECS88_0844 moeB moeA TRUE 0.999 0.000 0.323 0.003 Y NA
 5869027 5869028 ECS88_0845 ECS88_0846 iaaA yliA TRUE 0.870 20.000 0.104 1.000   NA
 5869028 5869029 ECS88_0846 ECS88_0847 yliA yliB TRUE 0.850 20.000 0.083 1.000   NA
 5869029 5869030 ECS88_0847 ECS88_0848 yliB yliC TRUE 0.997 18.000 0.803 0.055 Y NA
 5869030 5869031 ECS88_0848 ECS88_0849 yliC yliD TRUE 0.999 3.000 0.689 0.055 Y NA
 5869031 5869032 ECS88_0849 ECS88_0850 yliD yliE FALSE 0.033 177.000 0.000 NA N NA
 5869032 5869033 ECS88_0850 ECS88_0851 yliE yliF TRUE 0.985 8.000 0.000 NA Y NA
 5869035 5869036 ECS88_0853 ECS88_0854 bssR yliI FALSE 0.164 111.000 0.047 NA   NA
 5869039 5869040 ECS88_0857 ECS88_0858 deoR ybjG TRUE 0.687 58.000 0.235 1.000   NA
 5869042 5869043 ECS88_0860 ECS88_0861 ybjH ybjI FALSE 0.242 85.000 0.000 NA   NA
 5869043 5869044 ECS88_0861 ECS88_0862 ybjI ybjJ TRUE 0.947 0.000 0.000 NA   NA
 5869046 5869047 ECS88_misc_RNA_14 ECS88_0864 rybB ybjL FALSE 0.258 77.000 0.000 NA   NA
 5869050 5869051 ECS88_0867 ECS88_0868 ybjC nfsA TRUE 0.851 -16.000 0.159 NA   NA
 5869051 5869052 ECS88_0868 ECS88_0869 nfsA rimK FALSE 0.247 61.000 0.000 1.000 N NA
 5869052 5869053 ECS88_0869 ECS88_0870 rimK ybjN FALSE 0.242 88.000 0.065 NA   NA
 5869053 5869054 ECS88_0870 ECS88_0871 ybjN potF FALSE 0.010 350.000 0.000 NA   NA
 5869054 5869055 ECS88_0871 ECS88_0872 potF potG TRUE 0.681 197.000 0.679 1.000 Y NA
 5869055 5869056 ECS88_0872 ECS88_0873 potG potH TRUE 0.998 10.000 0.857 1.000 Y NA
 5869056 5869057 ECS88_0873 ECS88_0874 potH potI TRUE 0.999 -3.000 0.528 0.055 Y NA
 5869057 5869058 ECS88_0874 ECS88_0875 potI ybjO TRUE 0.671 60.000 0.264 NA   NA
 5869058 5869059 ECS88_0875 ECS88_0876 ybjO rumB TRUE 0.798 41.000 0.226 NA   NA
 5869060 5869061 ECS88_0877 ECS88_0879 artJ artM FALSE 0.308 225.000 0.143 0.071 Y NA
 5869061 5869062 ECS88_0879 ECS88_0880 artM artQ TRUE 0.999 0.000 0.714 0.017 Y NA
 5869062 5869063 ECS88_0880 ECS88_0881 artQ artI TRUE 0.997 7.000 0.260 0.055 Y NA
 5869063 5869064 ECS88_0881 ECS88_0882 artI artP TRUE 0.988 18.000 0.323 1.000 Y NA
 5869064 5869065 ECS88_0882 ECS88_0884 artP ybjP FALSE 0.031 218.000 0.000 NA   NA
 5869065 5869066 ECS88_0884 ECS88_0885 ybjP ybjP FALSE 0.392 -72.000 0.000 NA   NA
 5869067 5869068 ECS88_0887 ECS88_0888 ybjQ ybjR TRUE 0.928 -3.000 0.000 NA   NA
 5869069 5869070 ECS88_0889 ECS88_0890 ybjS ybjT TRUE 0.717 99.000 0.022 0.009 Y NA
 5869070 5869071 ECS88_0890 ECS88_0891 ybjT ltaE TRUE 0.882 11.000 0.074 1.000 N NA
 5869071 5869072 ECS88_0891 ECS88_0892 ltaE poxB TRUE 0.883 37.000 0.041 1.000 Y NA
 5869072 5869073 ECS88_0892 ECS88_0893 poxB hcr FALSE 0.051 133.000 0.025 1.000 N NA
 5869073 5869074 ECS88_0893 ECS88_0894 hcr hcp TRUE 0.989 12.000 0.000 0.015 Y NA
 5869074 5869075 ECS88_0894 ECS88_0895 hcp ybjE FALSE 0.110 144.000 0.000 NA   NA
 5869080 5869081 ECS88_0900 ECS88_0901 macA macB TRUE 0.994 -3.000 0.789 1.000 N NA
 5869083 5869084 ECS88_0903 ECS88_0904 clpS clpA TRUE 0.955 31.000 0.596 NA   NA
 5869084 5869085 ECS88_0904 ECS88_0905 clpA   FALSE 0.002 707.000 0.000 NA N NA
 11454660 5869081   ECS88_0901   macB FALSE NA 3460.000 0.000 NA   NA
 11597023 5869081   ECS88_0901   macB FALSE NA 3460.000 0.000 NA   NA
 11739415 5869081   ECS88_0901   macB FALSE NA 3460.000 0.000 NA   NA
 11454661 5869081   ECS88_0901   macB FALSE NA 3488.000 0.000 NA   NA
 11597024 5869081   ECS88_0901   macB FALSE NA 3488.000 0.000 NA   NA
 11739416 5869081   ECS88_0901   macB FALSE NA 3488.000 0.000 NA   NA
 11454662 5869081   ECS88_0901   macB FALSE NA 3520.000 0.000 NA   NA
 11597025 5869081   ECS88_0901   macB FALSE NA 3520.000 0.000 NA   NA
 11739417 5869081   ECS88_0901   macB FALSE NA 3520.000 0.000 NA   NA
 11454663 5869081   ECS88_0901   macB FALSE NA 3548.000 0.000 NA   NA
 11597026 5869081   ECS88_0901   macB FALSE NA 3548.000 0.000 NA   NA
 11739418 5869081   ECS88_0901   macB FALSE NA 3548.000 0.000 NA   NA
 11454664 5869081   ECS88_0901   macB FALSE NA 3580.000 0.000 NA   NA
 11597027 5869081   ECS88_0901   macB FALSE NA 3580.000 0.000 NA   NA
 11739419 5869081   ECS88_0901   macB FALSE NA 3580.000 0.000 NA   NA
 11454665 5869081   ECS88_0901   macB FALSE NA 3608.000 0.000 NA   NA
 11597028 5869081   ECS88_0901   macB FALSE NA 3608.000 0.000 NA   NA
 11739420 5869081   ECS88_0901   macB FALSE NA 3608.000 0.000 NA   NA
 11454666 5869081   ECS88_0901   macB FALSE NA 3640.000 0.000 NA   NA
 11597029 5869081   ECS88_0901   macB FALSE NA 3640.000 0.000 NA   NA
 11739421 5869081   ECS88_0901   macB FALSE NA 3640.000 0.000 NA   NA
 11454667 5869081   ECS88_0901   macB FALSE NA 3668.000 0.000 NA   NA
 11597030 5869081   ECS88_0901   macB FALSE NA 3668.000 0.000 NA   NA
 11739422 5869081   ECS88_0901   macB FALSE NA 3668.000 0.000 NA   NA
 11454668 5869081   ECS88_0901   macB FALSE NA 3700.000 0.000 NA   NA
 11597031 5869081   ECS88_0901   macB FALSE NA 3700.000 0.000 NA   NA
 11739423 5869081   ECS88_0901   macB FALSE NA 3700.000 0.000 NA   NA
 11454669 5869081   ECS88_0901   macB FALSE NA 3728.000 0.000 NA   NA
 11597032 5869081   ECS88_0901   macB FALSE NA 3728.000 0.000 NA   NA
 11739424 5869081   ECS88_0901   macB FALSE NA 3728.000 0.000 NA   NA
 11454670 5869081   ECS88_0901   macB FALSE NA 3760.000 0.000 NA   NA
 11597033 5869081   ECS88_0901   macB FALSE NA 3760.000 0.000 NA   NA
 11739425 5869081   ECS88_0901   macB FALSE NA 3760.000 0.000 NA   NA
 5869085 5869086 ECS88_0905 ECS88_0906     TRUE 0.995 -3.000 0.707 NA   NA
 5869086 5869087 ECS88_0906 ECS88_0907     FALSE 0.091 330.000 0.528 NA   NA
 5869087 5869088 ECS88_0907 ECS88_0908     TRUE 0.928 -3.000 0.000 NA   NA
 5869088 5869089 ECS88_0908 ECS88_0909     FALSE 0.293 67.000 0.000 NA   NA
 5869089 5869090 ECS88_0909 ECS88_0910     TRUE 0.903 11.000 0.000 NA   NA
 5869090 5869091 ECS88_0910 ECS88_0911     TRUE 0.919 -31.000 0.468 NA   NA
 5869092 5869093 ECS88_tRNA84 ECS88_0913   infA FALSE 0.004 844.000 0.000 NA   NA
 11454671 5869087   ECS88_0907     FALSE NA 3038.000 0.000 NA   NA
 11597034 5869087   ECS88_0907     FALSE NA 3038.000 0.000 NA   NA
 11739426 5869087   ECS88_0907     FALSE NA 3038.000 0.000 NA   NA
 11454672 5869087   ECS88_0907     FALSE NA 3066.000 0.000 NA   NA
 11597035 5869087   ECS88_0907     FALSE NA 3066.000 0.000 NA   NA
 11739427 5869087   ECS88_0907     FALSE NA 3066.000 0.000 NA   NA
 11454673 5869087   ECS88_0907     FALSE NA 3099.000 0.000 NA   NA
 11597036 5869087   ECS88_0907     FALSE NA 3099.000 0.000 NA   NA
 11739428 5869087   ECS88_0907     FALSE NA 3099.000 0.000 NA   NA
 11454674 5869087   ECS88_0907     FALSE NA 3127.000 0.000 NA   NA
 11597037 5869087   ECS88_0907     FALSE NA 3127.000 0.000 NA   NA
 11739429 5869087   ECS88_0907     FALSE NA 3127.000 0.000 NA   NA
 11454675 5869087   ECS88_0907     FALSE NA 3159.000 0.000 NA   NA
 11597038 5869087   ECS88_0907     FALSE NA 3159.000 0.000 NA   NA
 11739430 5869087   ECS88_0907     FALSE NA 3159.000 0.000 NA   NA
 11454676 5869087   ECS88_0907     FALSE NA 3187.000 0.000 NA   NA
 11597039 5869087   ECS88_0907     FALSE NA 3187.000 0.000 NA   NA
 11739431 5869087   ECS88_0907     FALSE NA 3187.000 0.000 NA   NA
 11454677 5869087   ECS88_0907     FALSE NA 3219.000 0.000 NA   NA
 11597040 5869087   ECS88_0907     FALSE NA 3219.000 0.000 NA   NA
 11739432 5869087   ECS88_0907     FALSE NA 3219.000 0.000 NA   NA
 11454678 5869087   ECS88_0907     FALSE NA 3247.000 0.000 NA   NA
 11597041 5869087   ECS88_0907     FALSE NA 3247.000 0.000 NA   NA
 11739433 5869087   ECS88_0907     FALSE NA 3247.000 0.000 NA   NA
 11454679 5869087   ECS88_0907     FALSE NA 3279.000 0.000 NA   NA
 11597042 5869087   ECS88_0907     FALSE NA 3279.000 0.000 NA   NA
 11739434 5869087   ECS88_0907     FALSE NA 3279.000 0.000 NA   NA
 11454680 5869087   ECS88_0907     FALSE NA 3307.000 0.000 NA   NA
 11597043 5869087   ECS88_0907     FALSE NA 3307.000 0.000 NA   NA
 11739435 5869087   ECS88_0907     FALSE NA 3307.000 0.000 NA   NA
 11454681 5869087   ECS88_0907     FALSE NA 3339.000 0.000 NA   NA
 11597044 5869087   ECS88_0907     FALSE NA 3339.000 0.000 NA   NA
 11739436 5869087   ECS88_0907     FALSE NA 3339.000 0.000 NA   NA
 11454682 5869087   ECS88_0907     FALSE NA 3367.000 0.000 NA   NA
 11597045 5869087   ECS88_0907     FALSE NA 3367.000 0.000 NA   NA
 11739437 5869087   ECS88_0907     FALSE NA 3367.000 0.000 NA   NA
 11454683 5869087   ECS88_0907     FALSE NA 3399.000 0.000 NA   NA
 11597046 5869087   ECS88_0907     FALSE NA 3399.000 0.000 NA   NA
 11739438 5869087   ECS88_0907     FALSE NA 3399.000 0.000 NA   NA
 5869093 5869094 ECS88_0913 ECS88_0914 infA aat FALSE 0.005 285.000 0.020 1.000 N NA
 5869094 5869095 ECS88_0914 ECS88_0915 aat cydC TRUE 0.860 42.000 0.049 1.000 Y NA
 5869095 5869096 ECS88_0915 ECS88_0916 cydC cydD TRUE 0.999 1.000 0.631 0.007 Y NA
 5869096 5869097 ECS88_0916 ECS88_0917 cydD trxB TRUE 0.519 123.000 0.049 1.000 Y NA
 5869098 5869099 ECS88_0919 ECS88_0921 lrp ftsK FALSE 0.402 135.000 0.345 1.000 N NA
 5869099 5869100 ECS88_0921 ECS88_0922 ftsK lolA FALSE 0.261 156.000 0.305 1.000 N NA
 5869100 5869101 ECS88_0922 ECS88_0923 lolA ycaJ TRUE 0.947 11.000 0.167 1.000 N NA
 5869101 5869102 ECS88_0923 ECS88_0924 ycaJ serS FALSE 0.353 91.000 0.078 0.093 N NA
 5869102 5869103 ECS88_0924 ECS88_0925 serS dmsA FALSE 0.016 239.000 0.000 1.000 N NA
 5869103 5869104 ECS88_0925 ECS88_0926 dmsA dmsB TRUE 0.994 11.000 0.172 0.048 Y NA
 5869104 5869105 ECS88_0926 ECS88_0927 dmsB dmsC TRUE 0.990 2.000 0.333 1.000   NA
 5869108 5869109 ECS88_0930 ECS88_0931 pflA pflB FALSE 0.049 192.000 0.092 1.000 N NA
 5869109 5869110 ECS88_0931 ECS88_0932 pflB focA TRUE 0.734 55.000 0.345 1.000 N NA
 5869110 5869111 ECS88_0932 ECS88_0933 focA ycaO FALSE 0.007 406.000 0.000 NA   NA
 5869112 5869113 ECS88_0934 ECS88_0935 ycaP serC FALSE 0.024 199.000 0.014 NA   NA
 5869113 5869114 ECS88_0935 ECS88_0936 serC aroA TRUE 0.658 71.000 0.033 1.000 Y NA
 5869114 5869115 ECS88_0936 ECS88_0937 aroA ycaL FALSE 0.018 170.000 0.003 1.000 N NA
 5869115 5869116 ECS88_0937 ECS88_0938 ycaL cmk FALSE 0.018 173.000 0.004 1.000 N NA
 5869116 5869117 ECS88_0938 ECS88_0939 cmk rpsA TRUE 0.442 111.000 0.281 1.000 N NA
 5869117 5869118 ECS88_0939 ECS88_0940 rpsA ihfB FALSE 0.242 160.000 0.292 1.000 N NA
 5869118 5869119 ECS88_0940 ECS88_0941 ihfB ycaI FALSE 0.025 206.000 0.003 1.000   NA
 5869119 5869120 ECS88_0941 ECS88_0942 ycaI msbA TRUE 0.793 37.000 0.075 0.084   NA
 5869120 5869121 ECS88_0942 ECS88_0943 msbA lpxK TRUE 0.969 -3.000 0.205 1.000 N NA
 5869121 5869122 ECS88_0943 ECS88_0944 lpxK ycaQ TRUE 0.448 37.000 0.017 NA   NA
 5869122 5869123 ECS88_0944 ECS88_0945 ycaQ ycaR FALSE 0.279 52.000 0.016 NA   NA
 5869123 5869124 ECS88_0945 ECS88_0946 ycaR kdsB TRUE 0.981 -3.000 0.265 NA   NA
 5869124 5869125 ECS88_0946 ECS88_0947 kdsB ycbJ FALSE 0.056 154.000 0.023 NA   NA
 5869127 5869128 ECS88_0949 ECS88_0950 smtA mukF TRUE 0.980 -3.000 0.325 NA N NA
 5869128 5869129 ECS88_0950 ECS88_0951 mukF mukE TRUE 0.982 8.000 0.036 NA Y NA
 5869129 5869130 ECS88_0951 ECS88_0952 mukE mukB TRUE 0.996 0.000 0.000 0.001 Y NA
 5869130 5869131 ECS88_0952 ECS88_0953 mukB ycbB FALSE 0.023 261.000 0.000 1.000   NA
 5869131 5869132 ECS88_0953 ECS88_0954 ycbB ycbK FALSE 0.275 181.000 0.372 NA   NA
 5869132 5869133 ECS88_0954 ECS88_0955 ycbK ycbL TRUE 0.760 27.000 0.089 NA   NA
 5869134 5869135 ECS88_0956 ECS88_0957 aspC ompF FALSE 0.024 185.000 0.036 1.000 N NA
 5869135 5869136 ECS88_0957 ECS88_0958 ompF asnS FALSE 0.003 602.000 0.000 1.000 N NA
 5869136 5869137 ECS88_0958 ECS88_0959 asnS pncB FALSE 0.031 169.000 0.034 1.000 N NA
 5869139 5869140 ECS88_0961 ECS88_0962 ssuB ssuC TRUE 0.997 -3.000 0.472 1.000 Y NA
 5869140 5869141 ECS88_0962 ECS88_0963 ssuC ssuD TRUE 0.957 12.000 0.226 1.000 N NA
 5869141 5869142 ECS88_0963 ECS88_0964 ssuD ssuA TRUE 0.983 -3.000 0.341 1.000 N NA
 5869142 5869143 ECS88_0964 ECS88_0965 ssuA ssuE TRUE 0.936 -7.000 0.169 1.000   NA
 5869144 5869145 ECS88_0966 ECS88_0967 pyrD ycbW FALSE 0.082 174.000 0.081 NA   NA
 5869147 5869148 ECS88_0969 ECS88_0970 ycbY uup TRUE 0.906 12.000 0.061 1.000   NA
 5869148 5869149 ECS88_0970 ECS88_0971 uup pqiA FALSE 0.132 130.000 0.054 NA   NA
 5869149 5869150 ECS88_0971 ECS88_0972 pqiA pqiB TRUE 0.995 5.000 0.819 NA   NA
 5869150 5869151 ECS88_0972 ECS88_0973 pqiB ymbA TRUE 0.987 12.000 0.531 NA   NA
 5869151 5869152 ECS88_0973 ECS88_0974 ymbA rmf FALSE 0.021 256.000 0.000 NA   NA
 5869153 5869154 ECS88_0975 ECS88_0976 fabA ycbZ TRUE 0.586 69.000 0.290 1.000 N NA
 5869157 5869158 ECS88_0979 ECS88_misc_RNA_15   isf FALSE 0.270 -125.000 0.000 NA   NA
 5869161 5869162 ECS88_0982 ECS88_0983 yccS yccF TRUE 0.850 19.000 0.090 NA   NA
 5869164 5869165 ECS88_0985 ECS88_0986 mgsA yccT FALSE 0.201 96.000 0.055 NA   NA
 5869167 5869168 ECS88_0988 ECS88_0989 yccV yccW TRUE 0.440 58.000 0.094 NA   NA
 5869170 5869171 ECS88_0991 ECS88_0992 tusE yccA FALSE 0.364 92.000 0.140 NA   NA
 5869171 5869172 ECS88_0992 ECS88_tRNA83 yccA   FALSE 0.037 207.000 0.000 NA   NA
 5869173 5869174 ECS88_0994 ECS88_0995 hyaA hyaB TRUE 0.995 -3.000 0.000 0.001 Y NA
 5869174 5869175 ECS88_0995 ECS88_0996 hyaB hyaC TRUE 0.993 19.000 0.355 0.047 Y NA
 5869175 5869176 ECS88_0996 ECS88_0997 hyaC hyaD TRUE 0.993 -3.000 0.177 1.000 Y NA
 5869176 5869177 ECS88_0997 ECS88_0998 hyaD hyaE TRUE 0.950 -3.000 0.096 NA   NA
 5869177 5869178 ECS88_0998 ECS88_0999 hyaE hyaF TRUE 0.995 -3.000 0.769 NA   NA
 5869178 5869179 ECS88_0999 ECS88_1000 hyaF appC FALSE 0.132 134.000 0.061 NA   NA
 5869179 5869180 ECS88_1000 ECS88_1001 appC appB TRUE 0.993 12.000 0.158 0.047 Y NA
 5869180 5869181 ECS88_1001 ECS88_1002 appB appA FALSE 0.064 185.000 0.000 1.000   NA
 5869183 5869184 ECS88_1004 ECS88_1005   cspG FALSE 0.023 241.000 0.000 NA   NA
 5869184 5869185 ECS88_1005 ECS88_1006 cspG gnsA FALSE 0.008 394.000 0.000 NA   NA
 5869186 5869187 ECS88_1007 ECS88_1008 yccM torS FALSE 0.145 83.000 0.000 NA N NA
 5869190 5869191 ECS88_1011 ECS88_1012 torC torA TRUE 0.995 0.000 0.000 0.047 Y NA
 5869191 5869192 ECS88_1012 ECS88_1013 torA torD TRUE 0.975 -3.000 0.077 0.047   NA
 5869193 5869194 ECS88_1014 ECS88_1015 cbpM cbpA TRUE 0.994 0.000 0.512 NA   NA
 5869196 5869197 ECS88_1017 ECS88_1018 yccJ wrbA TRUE 0.939 21.000 0.290 NA   NA
 5869198 5869199 ECS88_1019 ECS88_1020     TRUE 0.551 -36.000 0.000 NA   NA
 5869200 5869201 ECS88_1021 ECS88_1022 rutG rutG TRUE 0.928 -3.000 0.000 NA   NA
 5869201 5869202 ECS88_1022 ECS88_1023 rutG rutF FALSE 0.320 -93.000 0.000 NA   NA
 5869202 5869203 ECS88_1023 ECS88_1024 rutF rutE TRUE 0.995 11.000 0.625 0.028   NA
 5869203 5869204 ECS88_1024 ECS88_1025 rutE rutD TRUE 0.976 10.000 0.256 NA   NA
 5869204 5869205 ECS88_1025 ECS88_1026 rutD rutC TRUE 0.986 8.000 0.365 NA   NA
 5869205 5869206 ECS88_1026 ECS88_1027 rutC rutB TRUE 0.979 12.000 0.442 NA N NA
 5869206 5869207 ECS88_1027 ECS88_1028 rutB rutA TRUE 0.994 0.000 0.621 NA N NA
 5869210 5869211 ECS88_1032 ECS88_1033 putP efeU FALSE 0.018 211.000 0.000 NA N NA
 5869211 5869212 ECS88_1033 ECS88_1034 efeU efeO TRUE 0.916 58.000 0.356 NA Y NA
 5869212 5869213 ECS88_1034 ECS88_1035 efeO efeB TRUE 0.996 6.000 0.378 NA Y NA
 5869213 5869214 ECS88_1035 ECS88_1036 efeB phoH FALSE 0.003 491.000 0.000 NA N NA
 5869215 5869216 ECS88_1037 ECS88_1038 pgaD pgaC TRUE 0.992 2.000 0.462 NA   NA
 5869216 5869217 ECS88_1038 ECS88_1039 pgaC pgaB TRUE 0.970 -7.000 0.435 1.000 N NA
 5869217 5869218 ECS88_1039 ECS88_1040 pgaB pgaA TRUE 0.918 9.000 0.000 NA   NA
 5869218 5869219 ECS88_1040 ECS88_1041 pgaA pgaA FALSE 0.012 319.000 0.000 NA   NA
 5869222 5869223 ECS88_1044 ECS88_1045 ycdW ycdX TRUE 0.869 55.000 0.169 1.000 Y NA
 5869223 5869224 ECS88_1045 ECS88_1046 ycdX ycdY TRUE 0.955 24.000 0.417 1.000   NA
 5869224 5869225 ECS88_1046 ECS88_1048 ycdY ycdZ FALSE 0.353 102.000 0.145 NA   NA
 5869226 5869227 ECS88_1049 ECS88_1050 csgG csgF TRUE 0.648 27.000 0.043 NA   NA
 5869227 5869228 ECS88_1050 ECS88_1051 csgF csgE TRUE 0.974 25.000 0.723 NA   NA
 5869228 5869229 ECS88_1051 ECS88_1052 csgE csgD TRUE 0.971 5.000 0.176 NA   NA
 5869230 5869231 ECS88_1053 ECS88_1054 csgB csgA TRUE 0.930 41.000 0.333 0.008   NA
 5869231 5869232 ECS88_1054 ECS88_1055 csgA csgC TRUE 0.852 -100.000 0.667 NA   NA
 5869232 5869233 ECS88_1055 ECS88_1056 csgC ymdA TRUE 0.591 121.000 0.429 NA   NA
 5869233 5869234 ECS88_1056 ECS88_1057 ymdA ymdB FALSE 0.151 95.000 0.028 NA   NA
 5869234 5869235 ECS88_1057 ECS88_1058 ymdB ymdC TRUE 0.932 2.000 0.046 NA   NA
 5869236 5869237 ECS88_1059 ECS88_1060 mdoC   TRUE 0.482 45.000 0.000 NA   NA
 5869237 5869238 ECS88_1060 ECS88_1061     TRUE 0.932 4.000 0.000 NA   NA
 5869239 5869240 ECS88_1062 ECS88_1063 mdoG mdoH TRUE 0.969 -7.000 0.469 NA N NA
 5869240 5869241 ECS88_1063 ECS88_1065 mdoH yceK FALSE 0.125 172.000 0.135 NA   NA
 5869242 5869243 ECS88_1066 ECS88_1067 msyB mdtG TRUE 0.633 83.000 0.333 NA   NA
 5869243 5869244 ECS88_1067 ECS88_1068 mdtG lpxL TRUE 0.628 172.000 0.857 0.083 N NA
 5869246 5869247 ECS88_1070 ECS88_1071 yceI yceJ TRUE 0.995 4.000 0.676 NA   NA
 5869247 5869248 ECS88_1071 ECS88_1072 yceJ yceO FALSE 0.020 261.000 0.000 NA   NA
 5869248 5869249 ECS88_1072 ECS88_1073 yceO solA TRUE 0.934 21.000 0.269 NA   NA
 5869249 5869250 ECS88_1073 ECS88_1074 solA bssS TRUE 0.610 115.000 0.423 NA   NA
 5869250 5869251 ECS88_1074 ECS88_1075 bssS dinI FALSE 0.015 290.000 0.000 NA   NA
 5869251 5869252 ECS88_1075 ECS88_1076 dinI pyrC FALSE 0.354 -58.000 0.031 NA   NA
 5869252 5869253 ECS88_1076 ECS88_1077 pyrC yceB FALSE 0.132 106.000 0.022 NA   NA
 5869253 5869254 ECS88_1077 ECS88_1078 yceB grxB FALSE 0.156 134.000 0.078 NA   NA
 5869254 5869255 ECS88_1078 ECS88_1079 grxB mdtH FALSE 0.300 64.000 0.103 NA N NA
 5869256 5869257 ECS88_1080 ECS88_1081 rimJ yceH TRUE 0.940 11.000 0.116 NA   NA
 5869257 5869258 ECS88_1081 ECS88_1082 yceH mviM TRUE 0.962 2.000 0.103 NA   NA
 5869258 5869259 ECS88_1082 ECS88_1083 mviM mviN FALSE 0.153 110.000 0.022 1.000   NA
 5869260 5869261 ECS88_1084 ECS88_1085 flgN flgM TRUE 0.998 5.000 0.361 0.002 Y NA
 5869261 5869262 ECS88_1085 ECS88_1086 flgM flgA TRUE 0.861 76.000 0.330 NA Y NA
 5869263 5869264 ECS88_1087 ECS88_1088 flgB flgC TRUE 0.999 4.000 0.824 0.003 Y NA
 5869264 5869265 ECS88_1088 ECS88_1089 flgC flgD TRUE 0.989 12.000 0.186 NA Y NA
 5869265 5869266 ECS88_1089 ECS88_1090 flgD flgE TRUE 0.952 25.000 0.116 NA Y NA
 5869266 5869267 ECS88_1090 ECS88_1091 flgE flgF TRUE 0.995 20.000 0.476 0.003 Y NA
 5869267 5869268 ECS88_1091 ECS88_1092 flgF flgG TRUE 0.804 172.000 0.420 0.001 Y NA
 5869268 5869269 ECS88_1092 ECS88_1093 flgG flgH TRUE 0.952 53.000 0.268 0.005 Y NA
 5869269 5869270 ECS88_1093 ECS88_1094 flgH flgI TRUE 0.991 12.000 0.073 0.006 Y NA
 5869270 5869271 ECS88_1094 ECS88_1095 flgI flgJ TRUE 0.995 0.000 0.036 0.006 Y NA
 5869271 5869272 ECS88_1095 ECS88_1096 flgJ flgK TRUE 0.977 66.000 0.705 0.002 Y NA
 5869272 5869273 ECS88_1096 ECS88_1097 flgK flgL TRUE 0.994 12.000 0.142 0.001 Y NA
 5869274 5869275 ECS88_1098 ECS88_misc_RNA_16 rne   TRUE 0.723 25.000 0.000 NA   NA
 5869278 5869279 ECS88_misc_RNA_17 ECS88_1101 sraB yceD TRUE 0.586 37.000 0.000 NA   NA
 5869279 5869280 ECS88_1101 ECS88_1103 yceD rpmF TRUE 0.881 52.000 0.599 NA   NA
 5869280 5869281 ECS88_1103 ECS88_1104 rpmF plsX TRUE 0.657 81.000 0.418 1.000 N NA
 5869281 5869282 ECS88_1104 ECS88_1105 plsX fabH TRUE 0.948 68.000 0.380 0.004 Y NA
 5869282 5869283 ECS88_1105 ECS88_1106 fabH fabD TRUE 0.992 16.000 0.182 0.004 Y NA
 5869283 5869284 ECS88_1106 ECS88_1107 fabD fabG TRUE 0.997 13.000 0.432 0.004 Y NA
 5869284 5869285 ECS88_1107 ECS88_1108 fabG acpP TRUE 0.570 211.000 0.321 0.004 Y NA
 5869285 5869286 ECS88_1108 ECS88_1109 acpP fabF TRUE 0.866 87.000 0.346 1.000 Y NA
 5869286 5869287 ECS88_1109 ECS88_1110 fabF pabC FALSE 0.306 120.000 0.187 1.000 N NA
 5869287 5869288 ECS88_1110 ECS88_1111 pabC yceG TRUE 0.979 3.000 0.204 NA   NA
 5869288 5869289 ECS88_1111 ECS88_1112 yceG tmk TRUE 0.918 -10.000 0.209 NA   NA
 5869289 5869290 ECS88_1112 ECS88_1113 tmk holB TRUE 0.970 -3.000 0.211 1.000 N NA
 5869290 5869291 ECS88_1113 ECS88_1114 holB ycfH TRUE 0.986 11.000 0.110 NA Y NA
 5869291 5869292 ECS88_1114 ECS88_1115 ycfH ptsG FALSE 0.002 295.000 0.004 NA N NA
 5869294 5869295 ECS88_1117 ECS88_1118 hinT ycfL TRUE 0.932 3.000 0.051 NA   NA
 5869295 5869296 ECS88_1118 ECS88_1119 ycfL ycfM TRUE 0.983 14.000 0.516 NA   NA
 5869296 5869297 ECS88_1119 ECS88_1120 ycfM ycfN TRUE 0.909 -19.000 0.310 NA   NA
 5869297 5869298 ECS88_1120 ECS88_1121 ycfN nagZ TRUE 0.875 11.000 0.069 1.000 N NA
 5869298 5869299 ECS88_1121 ECS88_1122 nagZ ycfP TRUE 0.805 23.000 0.091 NA   NA
 5869299 5869300 ECS88_1122 ECS88_1123 ycfP ndh FALSE 0.007 399.000 0.057 NA   NA
 5869300 5869301 ECS88_1123 ECS88_1124 ndh ycfJ FALSE 0.037 227.000 0.071 1.000   NA
 5869304 5869305 ECS88_1127 ECS88_1128 ycfS mfd FALSE 0.075 145.000 0.006 1.000   NA
 5869305 5869306 ECS88_1128 ECS88_1129 mfd ycfT FALSE 0.102 128.000 0.003 1.000   NA
 5869307 5869308 ECS88_1130 ECS88_1131 lolC lolD TRUE 0.952 -7.000 0.175 0.068 N NA
 5869308 5869309 ECS88_1131 ECS88_1132 lolD lolE TRUE 0.980 0.000 0.125 0.068 N NA
 5869309 5869310 ECS88_1132 ECS88_1133 lolE ycfX TRUE 0.849 29.000 0.225 1.000 N NA
 5869310 5869311 ECS88_1133 ECS88_1134 ycfX cobB TRUE 0.977 16.000 0.119 1.000 Y NA
 5869312 5869313 ECS88_1135 ECS88_1136 ycfZ ymfA FALSE 0.291 -105.000 0.000 NA   NA
 5869313 5869314 ECS88_1136 ECS88_1137 ymfA potD FALSE 0.353 58.000 0.000 NA   NA
 5869314 5869315 ECS88_1137 ECS88_1138 potD potC TRUE 0.992 -3.000 0.000 0.053 Y NA
 5869315 5869316 ECS88_1138 ECS88_1139 potC potB TRUE 0.997 -3.000 0.286 0.053 Y NA
 5869316 5869317 ECS88_1139 ECS88_1140 potB potA TRUE 0.997 14.000 0.789 1.000 Y NA
 5869317 5869318 ECS88_1140 ECS88_1141 potA   TRUE 0.664 -21.000 0.000 NA   NA
 5869320 5869321 ECS88_1143 ECS88_1144 ycfD phoQ TRUE 0.706 76.000 0.408 NA   NA
 5869321 5869322 ECS88_1144 ECS88_1145 phoQ phoP TRUE 0.999 0.000 0.940 1.000 Y NA
 5869322 5869323 ECS88_1145 ECS88_1146 phoP purB FALSE 0.021 169.000 0.011 1.000 N NA
 5869323 5869324 ECS88_1146 ECS88_1147 purB hflD TRUE 0.951 4.000 0.093 NA   NA
 5869324 5869325 ECS88_1147 ECS88_1148 hflD trmU TRUE 0.802 36.000 0.180 NA   NA
 5869325 5869326 ECS88_1148 ECS88_1149 trmU ymfB TRUE 0.527 54.000 0.158 1.000 N NA
 5869326 5869327 ECS88_1149 ECS88_1150 ymfB ymfC TRUE 0.957 10.000 0.182 1.000 N NA
 5869329 5869330 ECS88_1152 ECS88_1153 int ymfG TRUE 0.991 -10.000 0.714 0.011   NA
 5869330 5869331 ECS88_1153 ECS88_1154 ymfG   FALSE 0.116 140.000 0.000 NA   NA
 5869331 5869332 ECS88_1154 ECS88_1155     TRUE 0.712 -16.000 0.000 NA   NA
 5869334 5869335 ECS88_1157 ECS88_1158     TRUE 0.903 11.000 0.000 NA   NA
 5869335 5869336 ECS88_1158 ECS88_1159     TRUE 0.617 -27.000 0.000 NA   NA
 5869336 5869337 ECS88_1159 ECS88_1160     TRUE 0.809 -9.000 0.000 NA   NA
 5869337 5869338 ECS88_1160 ECS88_1161     TRUE 0.928 -3.000 0.000 NA   NA
 5869338 5869339 ECS88_1161 ECS88_1162     TRUE 0.905 6.000 0.040 NA   NA
 5869339 5869340 ECS88_1162 ECS88_1163     FALSE 0.051 188.000 0.000 NA   NA
 5869340 5869341 ECS88_1163 ECS88_1164     FALSE 0.268 73.000 0.000 NA   NA
 5869341 5869342 ECS88_1164 ECS88_1165     FALSE 0.057 183.000 0.000 NA   NA
 5869342 5869343 ECS88_1165 ECS88_1166     TRUE 0.981 -16.000 1.000 NA   NA
 5869344 5869345 ECS88_1167 ECS88_1168     FALSE 0.020 261.000 0.000 NA   NA
 5869346 5869347 ECS88_1169 ECS88_1170     FALSE 0.306 -100.000 0.000 NA   NA
 5869347 5869348 ECS88_1170 ECS88_1171     FALSE 0.005 594.000 0.000 NA   NA
 5869349 5869350 ECS88_1172 ECS88_1173     FALSE 0.130 142.000 0.000 1.000   NA
 5869352 5869353 ECS88_1174 ECS88_1175     FALSE 0.275 -123.000 0.000 NA   NA
 5869353 5869354 ECS88_1175 ECS88_1176     TRUE 0.928 -3.000 0.000 NA   NA
 5869354 5869355 ECS88_1176 ECS88_1177     TRUE 0.928 -3.000 0.000 NA   NA
 5869355 5869356 ECS88_1177 ECS88_1178     FALSE 0.369 56.000 0.000 NA   NA
 5869356 5869357 ECS88_1178 ECS88_1179     TRUE 0.430 -63.000 0.000 NA   NA
 5869357 5869358 ECS88_1179 ECS88_1180     FALSE 0.132 134.000 0.000 NA   NA
 5869358 5869359 ECS88_1180 ECS88_1181   rusA FALSE 0.037 207.000 0.000 NA   NA
 5869359 5869360 ECS88_1181 ECS88_1182 rusA ybcQ FALSE 0.034 223.000 0.000 1.000   NA
 5869362 5869363 ECS88_1184 ECS88_1185 essD ybcS TRUE 0.947 0.000 0.000 NA   NA
 5869363 5869364 ECS88_1185 ECS88_1186 ybcS rzpD TRUE 0.939 -3.000 0.000 1.000   NA
 5869366 5869367 ECS88_1188 ECS88_1189     FALSE 0.037 207.000 0.000 NA   NA
 5869367 5869368 ECS88_1189 ECS88_1190     FALSE 0.028 227.000 0.000 NA   NA
 5869368 5869369 ECS88_1190 ECS88_1191     FALSE 0.248 82.000 0.000 NA   NA
 5869369 5869370 ECS88_1191 ECS88_1192     FALSE 0.402 -70.000 0.000 NA   NA
 5869370 5869371 ECS88_1192 ECS88_1193     TRUE 0.712 -16.000 0.000 NA   NA
 5869371 5869372 ECS88_1193 ECS88_1194     TRUE 0.610 -33.000 0.000 1.000   NA
 5869372 5869373 ECS88_1194 ECS88_1195     TRUE 0.900 -10.000 0.150 1.000   NA
 5869373 5869374 ECS88_1195 ECS88_1196     TRUE 0.626 37.000 0.000 1.000   NA
 5869374 5869375 ECS88_1196 ECS88_1197     FALSE 0.353 58.000 0.000 NA   NA
 5869375 5869376 ECS88_1197 ECS88_1198     TRUE 0.932 4.000 0.000 NA   NA
 5869376 5869377 ECS88_1198 ECS88_1199     TRUE 0.509 -43.000 0.000 NA   NA
 5869377 5869378 ECS88_1199 ECS88_1200     TRUE 0.466 -54.000 0.000 NA   NA
 5869378 5869379 ECS88_1200 ECS88_1201     TRUE 0.928 -3.000 0.000 NA   NA
 5869379 5869380 ECS88_1201 ECS88_1202     TRUE 0.653 -22.000 0.000 NA   NA
 5869380 5869381 ECS88_1202 ECS88_1203     TRUE 0.837 16.000 0.000 NA   NA
 5869381 5869382 ECS88_1203 ECS88_1204     TRUE 0.967 -18.000 0.667 NA   NA
 5869382 5869383 ECS88_1204 ECS88_1205     TRUE 0.840 -7.000 0.000 NA   NA
 5869383 5869384 ECS88_1205 ECS88_1206     TRUE 0.928 -3.000 0.000 NA   NA
 5869384 5869385 ECS88_1206 ECS88_1207     TRUE 0.947 0.000 0.000 NA   NA
 5869385 5869386 ECS88_1207 ECS88_1208     TRUE 0.925 6.000 0.000 NA   NA
 5869386 5869387 ECS88_1208 ECS88_1209     FALSE 0.299 -102.000 0.000 NA   NA
 5869387 5869388 ECS88_1209 ECS88_1210     FALSE 0.331 61.000 0.000 NA   NA
 5869388 5869389 ECS88_1210 ECS88_1211     FALSE 0.393 53.000 0.000 NA   NA
 5869389 5869390 ECS88_1211 ECS88_1212     TRUE 0.928 -3.000 0.000 NA   NA
 5869390 5869391 ECS88_1212 ECS88_1213     TRUE 0.876 13.000 0.000 NA   NA
 5869392 5869393 ECS88_1214 ECS88_1215 sitD sitC TRUE 0.999 -3.000 0.525 0.007 Y NA
 5869393 5869394 ECS88_1215 ECS88_1216 sitC sitB TRUE 0.999 -3.000 0.857 0.090 Y NA
 5869394 5869395 ECS88_1216 ECS88_1217 sitB sitA TRUE 0.999 0.000 0.894 1.000 Y NA
 5869396 5869397 ECS88_1218 ECS88_1219     FALSE 0.162 123.000 0.000 NA   NA
 5869397 5869398 ECS88_1219 ECS88_1220   icd FALSE 0.046 194.000 0.000 NA   NA
 5869399 5869400 ECS88_1221 ECS88_1222 ycgX ycgE FALSE 0.030 221.000 0.000 NA   NA
 5869400 5869401 ECS88_1222 ECS88_1223 ycgE   FALSE 0.330 -90.000 0.000 NA   NA
 5869401 5869402 ECS88_1223 ECS88_1224   ycgF FALSE 0.111 143.000 0.000 NA   NA
 5869403 5869404 ECS88_1225 ECS88_1226 ycgZ ymgA TRUE 0.506 43.000 0.000 NA   NA
 5869404 5869405 ECS88_1226 ECS88_1227 ymgA ymgB TRUE 0.675 29.000 0.000 NA   NA
 5869405 5869406 ECS88_1227 ECS88_1228 ymgB ymgC FALSE 0.184 113.000 0.000 NA   NA
 5869406 5869407 ECS88_1228 ECS88_1229 ymgC ycgG FALSE 0.010 340.000 0.000 NA   NA
 5869407 5869408 ECS88_1229 ECS88_1230 ycgG ymgF FALSE 0.137 132.000 0.000 NA   NA
 5869408 5869409 ECS88_1230 ECS88_1231 ymgF   FALSE 0.007 398.000 0.000 NA   NA
 5869409 5869410 ECS88_1231 ECS88_1232     FALSE 0.015 290.000 0.000 NA   NA
 5869410 5869411 ECS88_1232 ECS88_1233     FALSE 0.106 146.000 0.000 NA   NA
 5869412 5869413 ECS88_1234 ECS88_1235 ymgD ymgG TRUE 0.913 10.000 0.000 NA   NA
 5869415 5869416 ECS88_1237 ECS88_1238 minE minD TRUE 0.998 4.000 0.618 NA Y NA
 5869416 5869417 ECS88_1238 ECS88_1239 minD minC TRUE 0.988 24.000 0.466 1.000 Y NA
 5869420 5869421 ECS88_1242 ECS88_1243 ycgL ycgM FALSE 0.262 72.000 0.056 NA   NA
 5869421 5869422 ECS88_1243 ECS88_1244 ycgM ycgN FALSE 0.278 92.000 0.088 NA   NA
 5869424 5869425 ECS88_misc_RNA_19 ECS88_1246   umuD FALSE 0.338 60.000 0.000 NA   NA
 5869425 5869426 ECS88_1246 ECS88_1247 umuD umuC TRUE 0.922 0.000 0.000 1.000 N NA
 5869427 5869428 ECS88_1248 ECS88_1249 dsbB nhaB TRUE 0.590 146.000 0.723 1.000 N NA
 5869431 5869432 ECS88_1252 ECS88_1253 dadA dadX TRUE 0.953 10.000 0.168 1.000 N NA
 5869433 5869434 ECS88_1254 ECS88_1255 cvrA ldcA FALSE 0.205 95.000 0.103 NA N NA
 5869438 5869439 ECS88_1259 ECS88_1260 prrA modD TRUE 0.841 5.000 0.034 1.000 N NA
 5869439 5869440 ECS88_1260 ECS88_1261 modD   TRUE 0.902 -3.000 0.034 NA   NA
 5869440 5869441 ECS88_1261 ECS88_1262     TRUE 0.950 10.000 0.123 NA   NA
 5869441 5869442 ECS88_1262 ECS88_1263     TRUE 0.953 -141.000 0.862 1.000 Y NA
 5869442 5869443 ECS88_1263 ECS88_1264     TRUE 0.998 0.000 0.422 1.000 Y NA
 5869443 5869444 ECS88_1264 ECS88_1265   treA FALSE 0.009 295.000 0.000 1.000 N NA
 5869444 5869445 ECS88_1265 ECS88_1266 treA dhaH FALSE 0.014 319.000 0.000 1.000   NA
 5869445 5869446 ECS88_1266 ECS88_1267 dhaH dhaL TRUE 0.948 11.000 0.118 1.000   NA
 5869446 5869447 ECS88_1267 ECS88_1268 dhaL dhaK TRUE 0.997 11.000 0.226 0.001 Y NA
 5869449 5869450 ECS88_1270 ECS88_1271   ychF FALSE 0.126 136.000 0.000 NA   NA
 5869450 5869451 ECS88_1271 ECS88_1272 ychF pth TRUE 0.713 117.000 0.184 1.000 Y NA
 5869453 5869454 ECS88_1274 ECS88_1275 ychM prsA FALSE 0.063 125.000 0.027 1.000 N NA
 5869454 5869455 ECS88_1275 ECS88_1276 prsA ispE FALSE 0.057 151.000 0.053 1.000 N NA
 5869455 5869456 ECS88_1276 ECS88_1277 ispE lolB TRUE 0.969 0.000 0.157 1.000 N NA
 5869457 5869458 ECS88_1278 ECS88_1279 hemA prfA TRUE 0.814 42.000 0.171 0.042 N NA
 5869458 5869459 ECS88_1279 ECS88_1280 prfA prmC TRUE 0.998 0.000 0.229 0.042 Y NA
 5869459 5869460 ECS88_1280 ECS88_1281 prmC ychQ TRUE 0.955 -3.000 0.109 NA   NA
 5869460 5869461 ECS88_1281 ECS88_1282 ychQ ychA TRUE 0.975 4.000 0.195 NA   NA
 5869461 5869462 ECS88_1282 ECS88_1283 ychA kdsA TRUE 0.707 36.000 0.089 1.000   NA
 5869466 5869467 ECS88_1286 ECS88_1287 chaB chaC FALSE 0.220 137.000 0.140 NA   NA
 5869470 5869471 ECS88_1290 ECS88_1291 narL narX TRUE 0.997 -7.000 0.521 0.014 Y NA
 5869472 5869473 ECS88_1292 ECS88_1293   narK FALSE 0.214 95.000 0.000 NA   NA
 5869473 5869474 ECS88_1293 ECS88_1294 narK narG FALSE 0.005 393.000 0.000 1.000 N NA
 5869474 5869475 ECS88_1294 ECS88_1295 narG narH TRUE 0.999 -3.000 0.471 0.001 Y NA
 5869475 5869476 ECS88_1295 ECS88_1296 narH narJ TRUE 0.999 -3.000 0.588 0.003 Y NA
 5869476 5869477 ECS88_1296 ECS88_1297 narJ narI TRUE 0.999 0.000 0.500 0.003 Y NA
 5869478 5869479 ECS88_1298 ECS88_misc_RNA_21   rtt FALSE 0.029 224.000 0.000 NA   NA
 5869479 5869480 ECS88_misc_RNA_21 ECS88_tRNA81 rtt   TRUE 0.921 8.000 0.000 NA   NA
 5869480 5869481 ECS88_tRNA81 ECS88_tRNA80     TRUE 0.629 34.000 0.000 NA   NA
 5869481 5869482 ECS88_tRNA80 ECS88_1300   purU FALSE 0.081 160.000 0.000 NA   NA
 5869482 5869483 ECS88_1300 ECS88_1301 purU ychJ TRUE 0.683 50.000 0.200 NA   NA
 5869484 5869485 ECS88_1302 ECS88_1303 rssA rssB FALSE 0.224 92.000 0.048 1.000   NA
 5869485 5869486 ECS88_1303 ECS88_1304 rssB galU FALSE 0.109 202.000 0.235 1.000 N NA
 5869489 5869490 ECS88_1307 ECS88_1308   adhE FALSE 0.107 126.000 0.000 1.000 N NA
 5869493 5869494 ECS88_1311 ECS88_1312 oppA oppB TRUE 0.837 86.000 0.151 0.051 Y NA
 5869494 5869495 ECS88_1312 ECS88_1313 oppB oppC TRUE 0.998 15.000 0.870 0.051 Y NA
 5869495 5869496 ECS88_1313 ECS88_1314 oppC oppD TRUE 0.996 12.000 0.554 1.000 Y NA
 5869496 5869497 ECS88_1314 ECS88_1315 oppD oppF TRUE 0.999 -3.000 0.420 0.002 Y NA
 5869498 5869499 ECS88_1316 ECS88_1317 yciU cls TRUE 0.849 35.000 0.231 NA   NA
 5869501 5869502 ECS88_1319 ECS88_1321 kch yciI FALSE 0.014 300.000 0.000 NA   NA
 5869504 5869505 ECS88_1323 ECS88_1324 yciA yciB FALSE 0.291 106.000 0.167 NA N NA
 5869505 5869506 ECS88_1324 ECS88_1325 yciB yciC TRUE 0.670 30.000 0.061 NA   NA
 5869508 5869509 ECS88_1327 ECS88_1328     TRUE 0.853 -22.000 0.000 0.010   NA
 5869509 5869510 ECS88_1328 ECS88_1329     FALSE 0.343 65.000 0.000 1.000   NA
 5869510 5869511 ECS88_1329 ECS88_1330   ydfD FALSE 0.218 93.000 0.000 NA   NA
 5869511 5869512 ECS88_1330 ECS88_1331 ydfD   TRUE 0.928 -3.000 0.000 NA   NA
 5869512 5869513 ECS88_1331 ECS88_misc_RNA_22   dicF FALSE 0.279 70.000 0.000 NA   NA
 5869515 5869516 ECS88_1333 ECS88_1334 ydfC ydfB TRUE 0.668 30.000 0.000 NA   NA
 5869516 5869517 ECS88_1334 ECS88_1335 ydfB ydfA TRUE 0.943 2.000 0.000 NA   NA
 5869517 5869518 ECS88_1335 ECS88_1336 ydfA   FALSE 0.034 212.000 0.000 NA   NA
 5869519 5869520 ECS88_1337 ECS88_1338     FALSE 0.338 -88.000 0.000 NA   NA
 5869520 5869521 ECS88_1338 ECS88_1339     FALSE 0.299 66.000 0.000 NA   NA
 5869521 5869522 ECS88_1339 ECS88_1340     TRUE 0.535 41.000 0.000 NA   NA
 5869522 5869523 ECS88_1340 ECS88_1341     TRUE 0.522 42.000 0.000 NA   NA
 5869523 5869524 ECS88_1341 ECS88_1342     TRUE 0.894 16.000 0.111 NA   NA
 5869524 5869525 ECS88_1342 ECS88_1343     FALSE 0.186 112.000 0.000 NA   NA
 5869525 5869526 ECS88_1343 ECS88_1345   ydfU FALSE 0.004 819.000 0.000 NA   NA
 5869526 5869527 ECS88_1345 ECS88_1346 ydfU   TRUE 0.925 6.000 0.000 NA   NA
 5869527 5869528 ECS88_1346 ECS88_1347     FALSE 0.223 -193.000 0.000 NA   NA
 5869528 5869529 ECS88_1347 ECS88_1348     TRUE 0.939 -3.000 0.000 1.000   NA
 5869529 5869530 ECS88_1348 ECS88_1349     FALSE 0.029 225.000 0.000 NA   NA
 5869530 5869531 ECS88_1349 ECS88_1350     FALSE 0.353 151.000 0.333 NA   NA
 5869531 5869532 ECS88_1350 ECS88_tRNA18     TRUE 0.422 50.000 0.000 NA   NA
 5869532 5869533 ECS88_tRNA18 ECS88_tRNA19     FALSE 0.210 98.000 0.000 NA   NA
 5869533 5869534 ECS88_tRNA19 ECS88_1351     FALSE 0.004 976.000 0.000 NA   NA
 5869534 5869535 ECS88_1351 ECS88_1352     TRUE 0.521 -42.000 0.000 NA   NA
 5869535 5869536 ECS88_1352 ECS88_1353     TRUE 0.482 45.000 0.000 NA   NA
 5869536 5869537 ECS88_1353 ECS88_1354     TRUE 0.927 5.000 0.000 NA   NA
 5869539 5869540 ECS88_1356 ECS88_1357     FALSE 0.223 -193.000 0.000 NA   NA
 5869540 5869541 ECS88_1357 ECS88_1358     FALSE 0.159 124.000 0.000 NA   NA
 5869541 5869542 ECS88_1358 ECS88_1359   rzpD TRUE 0.943 2.000 0.000 NA   NA
 5869543 5869544 ECS88_1361 ECS88_1362     TRUE 0.466 46.000 0.000 NA   NA
 5869544 5869545 ECS88_1362 ECS88_1363   ynfO TRUE 0.506 43.000 0.000 NA   NA
 5869546 5869547 ECS88_1364 ECS88_1365     FALSE 0.402 -70.000 0.000 NA   NA
 5869547 5869548 ECS88_1365 ECS88_1366     TRUE 0.761 -12.000 0.000 NA   NA
 5869548 5869549 ECS88_1366 ECS88_1367     TRUE 0.712 -16.000 0.000 NA   NA
 5869549 5869550 ECS88_1367 ECS88_1368     TRUE 0.939 -3.000 0.000 1.000   NA
 5869550 5869551 ECS88_1368 ECS88_1369     TRUE 0.900 -10.000 0.150 1.000   NA
 5869551 5869552 ECS88_1369 ECS88_1370     TRUE 0.626 37.000 0.000 1.000   NA
 5869552 5869553 ECS88_1370 ECS88_1371     FALSE 0.353 58.000 0.000 NA   NA
 5869553 5869554 ECS88_1371 ECS88_1372     TRUE 0.932 4.000 0.000 NA   NA
 5869554 5869555 ECS88_1372 ECS88_1373     TRUE 0.509 -43.000 0.000 NA   NA
 5869555 5869556 ECS88_1373 ECS88_1374     TRUE 0.837 16.000 0.000 NA   NA
 5869556 5869557 ECS88_1374 ECS88_1375     TRUE 0.928 -3.000 0.000 NA   NA
 5869557 5869558 ECS88_1375 ECS88_1376     TRUE 0.921 8.000 0.000 NA   NA
 5869558 5869559 ECS88_1376 ECS88_1377     TRUE 0.865 14.000 0.000 NA   NA
 5869559 5869560 ECS88_1377 ECS88_1378     TRUE 0.968 27.000 0.667 NA   NA
 5869560 5869561 ECS88_1378 ECS88_1379     TRUE 0.675 -19.000 0.000 NA   NA
 5869561 5869562 ECS88_1379 ECS88_1380     TRUE 0.928 -3.000 0.000 NA   NA
 5869562 5869563 ECS88_1380 ECS88_1381     FALSE 0.338 60.000 0.000 NA   NA
 5869563 5869564 ECS88_1381 ECS88_1382     TRUE 0.542 -37.000 0.000 NA   NA
 5869564 5869565 ECS88_1382 ECS88_1383     FALSE 0.299 -102.000 0.000 NA   NA
 5869565 5869566 ECS88_1383 ECS88_1384     FALSE 0.327 62.000 0.000 NA   NA
 5869566 5869567 ECS88_1384 ECS88_1385     FALSE 0.293 67.000 0.000 NA   NA
 5869567 5869568 ECS88_1385 ECS88_1386     FALSE 0.288 68.000 0.000 NA   NA
 5869568 5869569 ECS88_1386 ECS88_1387     FALSE 0.106 152.000 0.000 1.000   NA
 5869569 5869570 ECS88_1387 ECS88_1388   tfaQ TRUE 0.947 0.000 0.000 NA   NA
 5869572 5869573 ECS88_1390 ECS88_1391     TRUE 0.932 4.000 0.000 NA   NA
 5869574 5869575 ECS88_1392 ECS88_1393 yciE yciF TRUE 0.829 46.000 0.115 0.001   NA
 5869575 5869576 ECS88_1393 ECS88_1394 yciF yciG FALSE 0.239 86.000 0.000 NA   NA
 5869576 5869577 ECS88_1394 ECS88_1395 yciG trpA FALSE 0.008 381.000 0.000 NA   NA
 5869577 5869578 ECS88_1395 ECS88_1396 trpA trpB TRUE 1.000 0.000 0.947 0.001 Y NA
 5869578 5869579 ECS88_1396 ECS88_1397 trpB trpC TRUE 0.996 12.000 0.221 0.001 Y NA
 5869579 5869580 ECS88_1397 ECS88_1398 trpC trpD TRUE 0.996 4.000 0.293 1.000 Y NA
 5869580 5869581 ECS88_1398 ECS88_1399 trpD trpE TRUE 0.995 0.000 0.010 0.001 Y NA
 5869581 5869582 ECS88_1399 ECS88_5088 trpE trpL FALSE 0.150 92.000 0.023 NA   NA
 5869583 5869584 ECS88_1400 ECS88_1401 yciV yciO TRUE 0.982 -3.000 0.281 NA   NA
 5869584 5869585 ECS88_1401 ECS88_1402 yciO yciQ TRUE 0.685 28.000 0.000 NA   NA
 5869585 5869586 ECS88_1402 ECS88_1403 yciQ rluB FALSE 0.034 213.000 0.000 NA   NA
 5869587 5869588 ECS88_1404 ECS88_1405 btuR yciK TRUE 0.878 -3.000 0.050 1.000 N NA
 5869588 5869589 ECS88_1405 ECS88_1406 yciK   TRUE 0.494 44.000 0.000 NA   NA
 5869592 5869593 ECS88_1410 ECS88_1411     FALSE 0.293 -103.000 0.000 NA   NA
 5869593 5869594 ECS88_1411 ECS88_1412   topA FALSE 0.091 123.000 0.003 NA   NA
 5869594 5869595 ECS88_1412 ECS88_1413 topA cysB FALSE 0.009 210.000 0.008 1.000 N NA
 5869595 5869596 ECS88_1413 ECS88_1414 cysB   FALSE 0.014 295.000 0.000 NA   NA
 5869596 5869597 ECS88_1414 ECS88_1415     TRUE 0.957 -18.000 0.556 NA   NA
 5869597 5869598 ECS88_1415 ECS88_1416   acnA FALSE 0.009 359.000 0.000 NA   NA
 5869600 5869601 ECS88_1418 ECS88_1419 pgpB yciS FALSE 0.184 149.000 0.143 NA   NA
 5869601 5869602 ECS88_1419 ECS88_1420 yciS yciM TRUE 0.992 7.000 0.576 NA   NA
 5869602 5869603 ECS88_1420 ECS88_1422 yciM pyrF FALSE 0.065 192.000 0.125 1.000 N NA
 5869603 5869604 ECS88_1422 ECS88_1423 pyrF yciH TRUE 0.902 0.000 0.045 1.000 N NA
 5869605 5869606 ECS88_1424 ECS88_1425 osmB deoT FALSE 0.018 269.000 0.000 NA   NA
 5869606 5869607 ECS88_1425 ECS88_1426 deoT   FALSE 0.385 90.000 0.146 NA   NA
 5869607 5869608 ECS88_1426 ECS88_1427   gmr FALSE 0.149 139.000 0.083 NA   NA
 5869608 5869609 ECS88_1427 ECS88_1428 gmr rnb FALSE 0.017 234.000 0.000 1.000 N NA
 5869609 5869610 ECS88_1428 ECS88_1429 rnb yciW FALSE 0.389 68.000 0.105 NA   NA
 5869610 5869611 ECS88_1429 ECS88_1430 yciW fabI FALSE 0.104 145.000 0.057 NA   NA
 5869612 5869613 ECS88_1431 ECS88_1432     TRUE 0.431 116.000 0.286 1.000 N NA
 5869613 5869614 ECS88_1432 ECS88_1433     TRUE 0.971 0.000 0.167 1.000 N NA
 5869614 5869615 ECS88_1433 ECS88_1434     TRUE 0.991 4.000 0.367 0.050 N NA
 5869615 5869616 ECS88_1434 ECS88_1435     TRUE 0.973 9.000 0.143 0.050 N NA
 5869617 5869618 ECS88_1436 ECS88_1437 sapF sapD TRUE 0.999 2.000 0.684 0.016 Y NA
 5869618 5869619 ECS88_1437 ECS88_1438 sapD sapC TRUE 0.999 0.000 0.667 1.000 Y NA
 5869619 5869620 ECS88_1438 ECS88_1439 sapC sapB TRUE 0.987 -13.000 0.284 0.050 Y NA
 5869620 5869621 ECS88_1439 ECS88_1440 sapB sapA TRUE 0.987 -3.000 0.264 0.050 N NA
 5869621 5869622 ECS88_1440 ECS88_1441 sapA ymjA FALSE 0.013 313.000 0.000 NA   NA
 5869622 5869623 ECS88_1441 ECS88_1442 ymjA puuP FALSE 0.132 134.000 0.000 NA   NA
 5869623 5869624 ECS88_1442 ECS88_1443 puuP pspF FALSE 0.051 189.000 0.000 NA   NA
 5869625 5869626 ECS88_1445 ECS88_1446 pspA pspB TRUE 0.903 54.000 0.739 NA   NA
 5869626 5869627 ECS88_1446 ECS88_1447 pspB pspC TRUE 0.997 0.000 0.913 NA   NA
 5869627 5869628 ECS88_1447 ECS88_1448 pspC pspD TRUE 0.965 9.000 0.167 NA   NA
 5869628 5869629 ECS88_1448 ECS88_1449 pspD pspE FALSE 0.408 75.000 0.133 NA   NA
 5869629 5869630 ECS88_1449 ECS88_1450 pspE ycjM FALSE 0.024 210.000 0.000 1.000 N NA
 5869630 5869631 ECS88_1450 ECS88_1451 ycjM ycjN TRUE 0.993 14.000 0.360 1.000 Y NA
 5869631 5869632 ECS88_1451 ECS88_1452 ycjN ycjO TRUE 0.996 21.000 0.620 0.050 Y NA
 5869632 5869633 ECS88_1452 ECS88_1453 ycjO ycjP TRUE 0.996 -13.000 0.805 0.050 Y NA
 5869633 5869634 ECS88_1453 ECS88_1454 ycjP ycjQ TRUE 0.658 31.000 0.000 NA   NA
 5869634 5869635 ECS88_1454 ECS88_1455 ycjQ ycjQ FALSE 0.041 202.000 0.000 NA   NA
 5869635 5869636 ECS88_1455 ECS88_1456 ycjQ ycjR TRUE 0.803 19.000 0.000 NA   NA
 5869636 5869637 ECS88_1456 ECS88_1457 ycjR ycjS TRUE 0.983 10.000 0.347 NA   NA
 5869637 5869638 ECS88_1457 ECS88_1458 ycjS ycjT TRUE 0.939 -3.000 0.000 1.000   NA
 5869638 5869639 ECS88_1458 ECS88_1459 ycjT ycjU TRUE 0.939 -3.000 0.000 1.000   NA
 5869639 5869640 ECS88_1459 ECS88_1460 ycjU ycjV TRUE 0.918 14.000 0.103 1.000   NA
 5869640 5869641 ECS88_1460 ECS88_1461 ycjV ompG TRUE 0.776 45.000 0.222 1.000   NA
 5869643 5869644 ECS88_1463 ECS88_1464 ycjX ycjF TRUE 0.995 -3.000 0.791 NA   NA
 5869644 5869645 ECS88_1464 ECS88_1465 ycjF tyrR FALSE 0.182 148.000 0.137 NA   NA
 5869648 5869649 ECS88_1468 ECS88_1469 mpaA ymjC FALSE 0.017 231.000 0.000 1.000 N NA
 5869649 5869650 ECS88_1469 ECS88_1470 ymjC ycjY FALSE 0.309 71.000 0.000 1.000   NA
 5869651 5869652 ECS88_1471 ECS88_1472 ycjZ mppA FALSE 0.007 337.000 0.000 1.000 N NA
 5869655 5869656 ECS88_1475 ECS88_1476 uspE fnr TRUE 0.803 152.000 0.619 1.000 Y NA
 5869656 5869657 ECS88_1476 ECS88_1477 fnr ogt FALSE 0.030 195.000 0.000 1.000 N NA
 5869657 5869658 ECS88_1477 ECS88_1478 ogt   TRUE 0.903 11.000 0.000 NA   NA
 5869661 5869662 ECS88_1481 ECS88_1482     TRUE 0.985 -3.000 0.293 1.000   NA
 5869662 5869663 ECS88_1482 ECS88_1483   ydaL FALSE 0.045 195.000 0.000 NA   NA
 5869665 5869666 ECS88_1485 ECS88_1486 ydaN   FALSE 0.017 275.000 0.000 NA   NA
 5869666 5869667 ECS88_1486 ECS88_misc_RNA_24   C0343 FALSE 0.281 -118.000 0.000 NA   NA
 5869667 5869668 ECS88_misc_RNA_24 ECS88_1487 C0343 dbpA FALSE 0.265 74.000 0.000 NA   NA
 5869669 5869670 ECS88_1488 ECS88_1489 ydaO   FALSE 0.404 52.000 0.000 NA   NA
 5869670 5869671 ECS88_1489 ECS88_1490     FALSE 0.003 1509.000 0.000 NA   NA
 5869671 5869672 ECS88_1490 ECS88_1491   uspF FALSE 0.024 237.000 0.000 NA   NA
 5869672 5869673 ECS88_1491 ECS88_1492 uspF ompN FALSE 0.078 141.000 0.000 1.000 N NA
 5869677 5869678 ECS88_1495 ECS88_1496 hslJ ldhA FALSE 0.107 111.000 0.000 NA N NA
 5869679 5869680 ECS88_1497 ECS88_1498 ydbH ynbE TRUE 0.934 -3.000 0.068 NA   NA
 5869680 5869681 ECS88_1498 ECS88_1499 ynbE ydbL TRUE 0.994 8.000 0.726 NA   NA
 5869681 5869682 ECS88_1499 ECS88_1500 ydbL ydbA FALSE 0.008 376.000 0.000 NA   NA
 5869682 5869683 ECS88_1500 ECS88_1501 ydbA ydbC FALSE 0.031 220.000 0.000 NA   NA
 5869685 5869686 ECS88_1503 ECS88_1504 ynbA ynbB TRUE 0.992 0.000 0.179 0.002   NA
 5869686 5869687 ECS88_1504 ECS88_1505 ynbB ynbC TRUE 0.837 16.000 0.000 NA   NA
 5869687 5869688 ECS88_1505 ECS88_1506 ynbC ynbD TRUE 0.990 14.000 0.285 NA Y NA
 5869690 5869691 ECS88_1509 ECS88_1510 hrpA ydcF FALSE 0.018 273.000 0.000 NA   NA
 5869691 5869692 ECS88_1510 ECS88_1511 ydcF aldA FALSE 0.034 197.000 0.040 NA   NA
 5869696 5869697 ECS88_1514 ECS88_1515 ydcA trg FALSE 0.083 158.000 0.000 NA   NA
 5869699 5869700 ECS88_1517 ECS88_1519 ydcJ mdoD FALSE 0.021 255.000 0.000 NA   NA
 5869702 5869703 ECS88_1521 ECS88_1522 ydcH rimL FALSE 0.231 63.000 0.026 NA   NA
 5869705 5869706 ECS88_1524 ECS88_1525 tehA tehB TRUE 0.974 -3.000 0.175 1.000   NA
 5869706 5869707 ECS88_1525 ECS88_1526 tehB ydcL FALSE 0.018 303.000 0.088 NA   NA
 5869709 5869710 ECS88_1528 ECS88_1529 ydcN ydcP FALSE 0.195 73.000 0.000 1.000 N NA
 5869712 5869713 ECS88_1531 ECS88_1532 ydcQ ydcR FALSE 0.254 79.000 0.000 NA   NA
 5869713 5869714 ECS88_1532 ECS88_1533 ydcR ydcS FALSE 0.123 245.000 0.000 1.000 Y NA
 5869714 5869715 ECS88_1533 ECS88_1534 ydcS ydcT TRUE 0.994 18.000 0.609 1.000 Y NA
 5869715 5869716 ECS88_1534 ECS88_1535 ydcT ydcT TRUE 0.932 4.000 0.000 NA   NA
 5869716 5869717 ECS88_1535 ECS88_1536 ydcT ydcU TRUE 0.945 1.000 0.000 NA   NA
 5869717 5869718 ECS88_1536 ECS88_1537 ydcU ydcV TRUE 0.997 -10.000 0.821 0.050 Y NA
 5869718 5869719 ECS88_1537 ECS88_1538 ydcV ydcW TRUE 0.891 22.000 0.216 1.000 N NA
 5869719 5869720 ECS88_1538 ECS88_1539 ydcW ydcX FALSE 0.013 312.000 0.000 NA   NA
 5869720 5869721 ECS88_1539 ECS88_1540 ydcX ydcY FALSE 0.239 86.000 0.000 NA   NA
 5869722 5869723 ECS88_1541 ECS88_1542 ydcZ yncA TRUE 0.936 -3.000 0.070 NA   NA
 5869724 5869725 ECS88_1543 ECS88_1544 yncB   TRUE 0.438 -60.000 0.000 NA   NA
 5869729 5869730 ECS88_1549 ECS88_1550 yncG yncG TRUE 0.865 14.000 0.000 NA   NA
 5869730 5869731 ECS88_1550 ECS88_1551 yncG   FALSE 0.005 541.000 0.000 NA   NA
 5869731 5869732 ECS88_1551 ECS88_1552     TRUE 0.803 19.000 0.000 NA   NA
 5869732 5869733 ECS88_1552 ECS88_1553     TRUE 0.493 -46.000 0.000 NA   NA
 5869733 5869734 ECS88_1553 ECS88_1554     FALSE 0.393 53.000 0.000 NA   NA
 5869734 5869735 ECS88_1554 ECS88_1555   ydcC FALSE 0.062 178.000 0.000 NA   NA
 5869735 5869736 ECS88_1555 ECS88_1556 ydcC   FALSE 0.256 78.000 0.000 NA   NA
 5869739 5869740 ECS88_1559 ECS88_1560 yddE narV FALSE 0.284 80.000 0.000 1.000   NA
 5869740 5869741 ECS88_1560 ECS88_1561 narV narW TRUE 0.999 -3.000 0.714 0.003 Y NA
 5869741 5869742 ECS88_1561 ECS88_1562 narW narY TRUE 0.999 0.000 0.714 0.003 Y NA
 5869742 5869743 ECS88_1562 ECS88_1563 narY narZ TRUE 0.999 -3.000 0.833 0.001 Y NA
 5869743 5869744 ECS88_1563 ECS88_1564 narZ narU TRUE 0.693 95.000 0.556 1.000 N NA
 5869744 5869745 ECS88_1564 ECS88_1565 narU yddG FALSE 0.021 273.000 0.000 1.000   NA
 5869746 5869747 ECS88_1566 ECS88_1568 fdnG fdnH TRUE 0.997 13.000 0.429 0.002 Y NA
 5869747 5869748 ECS88_1568 ECS88_1569 fdnH fdnI TRUE 0.995 -7.000 0.333 0.002 Y NA
 5869748 5869749 ECS88_1569 ECS88_misc_RNA_27 fdnI C0362 TRUE 0.913 10.000 0.000 NA   NA
 5869750 5869751 ECS88_1570 ECS88_1571 yddM   TRUE 0.947 0.000 0.000 NA   NA
 5869751 5869752 ECS88_1571 ECS88_1572   adhP FALSE 0.053 186.000 0.000 NA   NA
 5869752 5869753 ECS88_1572 ECS88_1573 adhP sfcA FALSE 0.152 134.000 0.000 1.000   NA
 5869753 5869754 ECS88_1573 ECS88_1575 sfcA bdm FALSE 0.007 395.000 0.000 NA   NA
 5869756 5869757 ECS88_1577 ECS88_1578 dos yddV TRUE 0.932 25.000 0.130 0.004   NA
 5869757 5869758 ECS88_1578 ECS88_1579 yddV yddW FALSE 0.013 324.000 0.000 1.000   NA
 5869758 5869759 ECS88_1579 ECS88_1580 yddW gadC FALSE 0.160 131.000 0.000 1.000   NA
 5869759 5869760 ECS88_1580 ECS88_1581 gadC gadB FALSE 0.419 156.000 0.103 1.000 Y NA
 5869760 5869761 ECS88_1581 ECS88_1582 gadB pqqL FALSE 0.011 361.000 0.000 1.000   NA
 5869761 5869762 ECS88_1582 ECS88_1583 pqqL yddB TRUE 0.717 45.000 0.167 1.000   NA
 5869762 5869763 ECS88_1583 ECS88_1584 yddB yddA TRUE 0.768 38.000 0.000 0.064   NA
 5869763 5869764 ECS88_1584 ECS88_1585 yddA ydeM FALSE 0.018 291.000 0.000 1.000   NA
 5869764 5869765 ECS88_1585 ECS88_1586 ydeM ydeN TRUE 0.930 52.000 0.600 0.055   NA
 5869765 5869766 ECS88_1586 ECS88_1587 ydeN ydeO FALSE 0.005 402.000 0.000 1.000 N NA
 5869766 5869767 ECS88_1587 ECS88_1588 ydeO   FALSE 0.263 75.000 0.000 NA   NA
 5869767 5869768 ECS88_1588 ECS88_1589   ydeP FALSE 0.022 248.000 0.000 NA   NA
 5869768 5869769 ECS88_1589 ECS88_1590 ydeP ydeQ FALSE 0.010 339.000 0.000 NA   NA
 5869769 5869770 ECS88_1590 ECS88_1591 ydeQ   FALSE 0.009 364.000 0.000 NA   NA
 5869770 5869771 ECS88_1591 ECS88_1592     FALSE 0.015 315.000 0.000 1.000   NA
 5869773 5869774 ECS88_1594 ECS88_1595 hipA hipB TRUE 0.996 0.000 0.675 NA   NA
 5869776 5869777 ECS88_1597 ECS88_1598 yneE uxaB FALSE 0.086 197.000 0.143 NA   NA
 5869777 5869778 ECS88_1598 ECS88_1599 uxaB yneF FALSE 0.019 227.000 0.000 1.000 N NA
 5869778 5869779 ECS88_1599 ECS88_1600 yneF yneG FALSE 0.168 139.000 0.098 NA   NA
 5869779 5869780 ECS88_1600 ECS88_1601 yneG yneH TRUE 0.930 0.000 0.037 NA   NA
 5869780 5869781 ECS88_1601 ECS88_1602 yneH yneI FALSE 0.232 64.000 0.000 1.000 N NA
 5869782 5869783 ECS88_1603 ECS88_1604 yneJ ydeA FALSE 0.002 339.000 0.027 NA N NA
 5869785 5869786 ECS88_1606 ECS88_1607 marR marA TRUE 0.996 21.000 0.667 0.042 Y NA
 5869786 5869787 ECS88_1607 ECS88_1608 marA marB TRUE 0.648 32.000 0.000 NA   NA
 5869788 5869789 ECS88_1609 ECS88_1610     TRUE 0.975 -6.000 0.000 1.000 Y NA
 5869789 5869790 ECS88_1610 ECS88_1611     TRUE 0.942 55.000 0.250 0.013 Y NA
 5869790 5869791 ECS88_1611 ECS88_1612     TRUE 0.974 25.000 0.105 0.013 Y NA
 5869791 5869792 ECS88_1612 ECS88_1613     TRUE 0.970 76.000 0.789 0.013 Y NA
 5869796 5869797 ECS88_1617 ECS88_1618 ydeH dcp FALSE 0.004 508.000 0.000 1.000 N NA
 5869798 5869799 ECS88_1619 ECS88_1620 ydfG ydfH FALSE 0.262 89.000 0.000 1.000   NA
 5869799 5869800 ECS88_1620 ECS88_1621 ydfH ydfZ FALSE 0.063 177.000 0.000 NA   NA
 5869801 5869802 ECS88_1622 ECS88_1623 ydfI ydfJ FALSE 0.231 89.000 0.000 NA   NA
 5869802 5869803 ECS88_1623 ECS88_1624 ydfJ ynfP TRUE 0.712 -16.000 0.000 NA   NA
 5869803 5869804 ECS88_1624 ECS88_1625 ynfP rspB FALSE 0.353 58.000 0.000 NA   NA
 5869804 5869805 ECS88_1625 ECS88_1626 rspB rspA TRUE 0.815 12.000 0.049 1.000 N NA
 5869805 5869806 ECS88_1626 ECS88_1627 rspA ynfA FALSE 0.028 206.000 0.020 1.000   NA
 5869807 5869808 ECS88_1628 ECS88_1629 ynfB speG TRUE 0.599 35.000 0.055 NA   NA
 5869810 5869811 ECS88_1631 ECS88_1632 ynfD ynfE FALSE 0.169 199.000 0.304 NA   NA
 5869811 5869812 ECS88_1632 ECS88_1633 ynfE ynfF TRUE 0.940 61.000 0.231 0.001 Y NA
 5869812 5869813 ECS88_1633 ECS88_1634 ynfF ynfG TRUE 0.999 11.000 0.667 0.044 Y NA
 5869813 5869814 ECS88_1634 ECS88_1635 ynfG ynfH TRUE 0.990 2.000 0.333 1.000   NA
 5869814 5869815 ECS88_1635 ECS88_1636 ynfH dmsD TRUE 0.681 43.000 0.125 1.000   NA
 5869815 5869816 ECS88_1636 ECS88_1637 dmsD clcB FALSE 0.060 198.000 0.079 1.000   NA
 5869817 5869818 ECS88_1638 ECS88_1639 ynfK dgsA TRUE 0.519 125.000 0.455 NA N NA
 5869818 5869819 ECS88_1639 ECS88_1640 dgsA ynfL TRUE 0.771 135.000 0.408 NA Y NA
 5869820 5869821 ECS88_1641 ECS88_1642 ynfM asr FALSE 0.007 425.000 0.000 NA   NA
 5869821 5869822 ECS88_1642 ECS88_1643 asr ydgD FALSE 0.017 276.000 0.000 NA   NA
 5869823 5869824 ECS88_1644 ECS88_1645 mdtI mdtJ TRUE 0.996 -13.000 0.869 0.078 Y NA
 5869826 5869827 ECS88_1647 ECS88_1648 pntB pntA TRUE 0.999 11.000 0.745 0.001 Y NA
 5869828 5869829 ECS88_1649 ECS88_1650 ydgH ydgI FALSE 0.104 186.000 0.143 NA   NA
 5869829 5869830 ECS88_1650 ECS88_1651 ydgI folM TRUE 0.683 37.000 0.140 1.000 N NA
 5869832 5869833 ECS88_1654 ECS88_1655 rstA rstB TRUE 0.994 4.000 0.181 1.000 Y NA
 5869833 5869834 ECS88_1655 ECS88_1656 rstB tus TRUE 0.536 76.000 0.200 1.000   NA
 5869835 5869836 ECS88_1657 ECS88_1658 fumC fumA TRUE 0.641 143.000 0.000 0.001 Y NA
 5869837 5869838 ECS88_1659 ECS88_1660 manA ydgA TRUE 0.801 101.000 0.778 NA   NA
 5869839 5869840 ECS88_1661 ECS88_1662 uidC uidB TRUE 0.895 39.000 0.375 1.000   NA
 5869840 5869841 ECS88_1662 ECS88_1663 uidB uidA TRUE 0.995 -3.000 0.235 1.000 Y NA
 5869841 5869842 ECS88_1663 ECS88_1665 uidA uidR FALSE 0.005 390.000 0.000 1.000 N NA
 5869842 5869843 ECS88_1665 ECS88_1666 uidR hdhA FALSE 0.018 229.000 0.000 1.000 N NA
 5869843 5869844 ECS88_1666 ECS88_1667 hdhA malI FALSE 0.131 112.000 0.000 1.000 N NA
 5869845 5869846 ECS88_1668 ECS88_1669 malX malY TRUE 0.988 10.000 0.531 1.000 N NA
 5869846 5869847 ECS88_1669 ECS88_1670 malY add FALSE 0.270 104.000 0.132 1.000 N NA
 5869849 5869850 ECS88_1672 ECS88_1673 blr ydgT FALSE 0.018 273.000 0.000 NA   NA
 5869850 5869851 ECS88_1673 ECS88_1674 ydgT ydgK FALSE 0.356 86.000 0.120 NA   NA
 5869851 5869852 ECS88_1674 ECS88_1675 ydgK rsxA TRUE 0.428 77.000 0.148 NA   NA
 5869852 5869853 ECS88_1675 ECS88_1676 rsxA rsxB TRUE 0.999 0.000 0.564 0.044 Y NA
 5869853 5869854 ECS88_1676 ECS88_1677 rsxB rsxC TRUE 0.997 -7.000 0.537 0.044 Y NA
 5869854 5869855 ECS88_1677 ECS88_1678 rsxC rsxD TRUE 0.999 1.000 0.814 0.044 Y NA
 5869855 5869856 ECS88_1678 ECS88_1679 rsxD rsxG TRUE 0.999 4.000 0.924 0.044 Y NA
 5869856 5869857 ECS88_1679 ECS88_1680 rsxG rsxE TRUE 0.999 4.000 0.908 0.044 Y NA
 5869857 5869858 ECS88_1680 ECS88_1681 rsxE nth TRUE 0.955 0.000 0.109 1.000 N NA
 5869858 5869859 ECS88_1681 ECS88_1682 nth ydgR FALSE 0.003 611.000 0.000 1.000 N NA
 5869859 5869860 ECS88_1682 ECS88_1683 ydgR gst TRUE 0.535 105.000 0.344 1.000 N NA
 5869861 5869862 ECS88_1684 ECS88_1685 pdxY tyrS FALSE 0.202 59.000 0.041 1.000 N NA
 5869862 5869863 ECS88_1685 ECS88_1686 tyrS pdxH FALSE 0.091 129.000 0.054 1.000 N NA
 5869863 5869864 ECS88_1686 ECS88_1687 pdxH ydhA FALSE 0.271 59.000 0.034 NA   NA
 5869864 5869865 ECS88_1687 ECS88_1688 ydhA anmK FALSE 0.159 98.000 0.034 NA   NA
 5869868 5869869 ECS88_1691 ECS88_1692 ydhI ydhJ TRUE 0.991 3.000 0.412 NA   NA
 5869869 5869870 ECS88_1692 ECS88_1693 ydhJ ydhK TRUE 0.947 0.000 0.000 NA   NA
 5869871 5869872 ECS88_1694 ECS88_1695 sodC ydhF FALSE 0.222 81.000 0.033 1.000   NA
 5869872 5869873 ECS88_1695 ECS88_1697 ydhF ydhL FALSE 0.388 49.000 0.045 NA   NA
 5869874 5869875 ECS88_1698 ECS88_1699 ydhM nemA TRUE 0.873 37.000 0.362 1.000 N NA
 5869875 5869876 ECS88_1699 ECS88_1700 nemA gloA FALSE 0.172 81.000 0.057 1.000 N NA
 5869876 5869877 ECS88_1700 ECS88_1701 gloA rnt FALSE 0.276 103.000 0.136 1.000 N NA
 5869877 5869878 ECS88_1701 ECS88_1702 rnt   FALSE 0.218 93.000 0.000 NA   NA
 5869880 5869881 ECS88_1704 ECS88_1705 ydhO sodB FALSE 0.048 128.000 0.015 1.000 N NA
 5869885 5869886 ECS88_1709 ECS88_1710 ydhC cfa FALSE 0.010 291.000 0.000 1.000 N NA
 5869890 5869891 ECS88_tRNA20 ECS88_tRNA21     TRUE 0.927 5.000 0.000 NA   NA
 5869891 5869892 ECS88_tRNA21 ECS88_1715   ydhR FALSE 0.196 108.000 0.000 NA   NA
 5869892 5869893 ECS88_1715 ECS88_1716 ydhR ydhS FALSE 0.154 126.000 0.000 NA   NA
 5869894 5869895 ECS88_1717 ECS88_1718 ydhT ydhU TRUE 0.979 4.000 0.222 NA   NA
 5869895 5869896 ECS88_1718 ECS88_1719 ydhU ydhX TRUE 0.997 -3.000 0.444 NA Y NA
 5869896 5869897 ECS88_1719 ECS88_1720 ydhX ydhW TRUE 0.624 64.000 0.235 NA   NA
 5869897 5869898 ECS88_1720 ECS88_1721 ydhW ydhV TRUE 0.991 4.000 0.458 NA   NA
 5869898 5869899 ECS88_1721 ECS88_1722 ydhV ydhY TRUE 0.996 21.000 0.600 0.013 Y NA
 5869899 5869900 ECS88_1722 ECS88_1723 ydhY ydhZ FALSE 0.006 456.000 0.000 NA   NA
 5869901 5869902 ECS88_1726 ECS88_1727 pykF lpp FALSE 0.009 311.000 0.000 1.000 N NA
 5869903 5869904 ECS88_1728 ECS88_1729 ynhG sufE FALSE 0.108 149.000 0.069 NA   NA
 5869904 5869905 ECS88_1729 ECS88_1730 sufE sufS TRUE 0.951 13.000 0.183 NA   NA
 5869905 5869906 ECS88_1730 ECS88_1731 sufS sufD TRUE 0.967 -3.000 0.193 1.000 N NA
 5869906 5869907 ECS88_1731 ECS88_1732 sufD sufC TRUE 0.980 -25.000 0.482 1.000 Y NA
 5869907 5869908 ECS88_1732 ECS88_1733 sufC sufB TRUE 0.997 10.000 0.466 1.000 Y NA
 5869908 5869909 ECS88_1733 ECS88_1734 sufB sufA TRUE 0.899 9.000 0.041 NA   NA
 5869911 5869912 ECS88_1735 ECS88_1736 ydiH ydiI TRUE 0.739 19.000 0.032 NA   NA
 5869912 5869913 ECS88_1736 ECS88_1737 ydiI ydiJ TRUE 0.940 -3.000 0.129 NA N NA
 5869914 5869915 ECS88_1738 ECS88_misc_RNA_29 ydiK rprA FALSE 0.053 186.000 0.000 NA   NA
 5869915 5869916 ECS88_misc_RNA_29 ECS88_1739 rprA ydiL FALSE 0.111 143.000 0.000 NA   NA
 5869916 5869917 ECS88_1739 ECS88_1740 ydiL ydiM FALSE 0.305 100.000 0.095 1.000   NA
 5869917 5869918 ECS88_1740 ECS88_1741 ydiM ydiN FALSE 0.028 227.000 0.000 NA   NA
 5869918 5869919 ECS88_1741 ECS88_1742 ydiN ydiB TRUE 0.856 12.000 0.082 NA N NA
 5869919 5869920 ECS88_1742 ECS88_1743 ydiB aroD TRUE 0.940 31.000 0.113 1.000 Y NA
 5869920 5869921 ECS88_1743 ECS88_1744 aroD ydiF FALSE 0.035 146.000 0.019 1.000 N NA
 5869921 5869922 ECS88_1744 ECS88_1745 ydiF ydiO TRUE 0.995 14.000 0.500 1.000 Y NA
 5869923 5869924 ECS88_1746 ECS88_1747 ydiP   FALSE 0.205 103.000 0.000 NA   NA
 5869925 5869926 ECS88_1748 ECS88_1749 ydiQ ydiR TRUE 0.998 20.000 1.000 0.011 Y NA
 5869926 5869927 ECS88_1749 ECS88_1750 ydiR ydiS TRUE 0.986 55.000 1.000 0.044 Y NA
 5869927 5869928 ECS88_1750 ECS88_1751 ydiS ydiT TRUE 0.998 -3.000 0.400 0.044 Y NA
 5869928 5869929 ECS88_1751 ECS88_1752 ydiT ydiD TRUE 0.929 3.000 0.080 1.000 N NA
 5869931 5869932 ECS88_1754 ECS88_1755 ydiA aroH FALSE 0.197 157.000 0.165 1.000   NA
 5869932 5869933 ECS88_1755 ECS88_1756 aroH ydiE FALSE 0.067 132.000 0.054 NA N NA
 5869934 5869935 ECS88_1757 ECS88_1758 ydiU ydiV FALSE 0.244 63.000 0.031 NA   NA
 5869935 5869936 ECS88_1758 ECS88_1759 ydiV nlpC FALSE 0.012 247.000 0.000 NA N NA
 5869936 5869937 ECS88_1759 ECS88_1760 nlpC btuD FALSE 0.151 78.000 0.000 NA N NA
 5869937 5869938 ECS88_1760 ECS88_1761 btuD btuE TRUE 0.922 0.000 0.000 1.000 N NA
 5869938 5869939 ECS88_1761 ECS88_1762 btuE btuC FALSE 0.311 62.000 0.084 1.000 N NA
 5869939 5869940 ECS88_1762 ECS88_1763 btuC ihfA FALSE 0.081 101.000 0.023 1.000 N NA
 5869940 5869941 ECS88_1763 ECS88_1764 ihfA pheT TRUE 0.969 5.000 0.208 1.000 N NA
 5869941 5869942 ECS88_1764 ECS88_1765 pheT pheS TRUE 0.998 15.000 0.574 0.001 Y NA
 5869942 5869943 ECS88_1765 ECS88_5089 pheS pheM FALSE 0.016 284.000 0.000 NA   NA
 5869943 5869944 ECS88_5089 ECS88_1766 pheM rplT FALSE 0.162 123.000 0.000 NA   NA
 5869944 5869945 ECS88_1766 ECS88_1767 rplT rpmI TRUE 0.987 53.000 0.928 0.010 Y NA
 5869945 5869946 ECS88_1767 ECS88_1768 rpmI infC FALSE 0.211 97.000 0.000 NA   NA
 5869946 5869947 ECS88_1768 ECS88_1769 infC thrS FALSE 0.186 112.000 0.000 NA   NA
 5869948 5869949 ECS88_1770 ECS88_1771     TRUE 0.434 49.000 0.000 NA   NA
 5869949 5869950 ECS88_1771 ECS88_1772     TRUE 0.521 -42.000 0.000 NA   NA
 5869950 5869951 ECS88_1772 ECS88_1773     FALSE 0.338 60.000 0.000 NA   NA
 5869953 5869954 ECS88_1775 ECS88_1776 pfkB ydiZ FALSE 0.207 101.000 0.000 NA   NA
 5869954 5869955 ECS88_1776 ECS88_1777 ydiZ yniA FALSE 0.201 106.000 0.000 NA   NA
 5869957 5869958 ECS88_1779 ECS88_1780 yniC ydjM FALSE 0.085 164.000 0.068 NA   NA
 5869958 5869959 ECS88_1780 ECS88_1781 ydjM ydjN FALSE 0.192 133.000 0.102 NA   NA
 5869962 5869963 ECS88_1785 ECS88_1786 chbG chbF TRUE 0.990 13.000 0.429 0.018   NA
 5869963 5869964 ECS88_1786 ECS88_1787 chbF chbR TRUE 0.717 104.000 0.625 1.000 N NA
 5869964 5869965 ECS88_1787 ECS88_1788 chbR chbA TRUE 0.993 8.000 0.727 1.000 N NA
 5869965 5869966 ECS88_1788 ECS88_1789 chbA chbC TRUE 0.986 51.000 0.833 0.013 Y NA
 5869966 5869967 ECS88_1789 ECS88_1790 chbC chbB TRUE 0.945 85.000 0.500 0.013 Y NA
 5869967 5869968 ECS88_1790 ECS88_1791 chbB osmE FALSE 0.016 299.000 0.000 1.000   NA
 5869969 5869970 ECS88_1792 ECS88_1793 nadE ydjQ FALSE 0.007 230.000 0.010 1.000 N NA
 5869971 5869972 ECS88_1794 ECS88_1795 ydjR spy FALSE 0.026 203.000 0.028 NA   NA
 5869972 5869973 ECS88_1795 ECS88_1796 spy astE FALSE 0.006 330.000 0.000 NA N NA
 5869973 5869974 ECS88_1796 ECS88_1797 astE astB TRUE 0.979 -7.000 0.126 1.000 Y NA
 5869974 5869975 ECS88_1797 ECS88_1798 astB astD TRUE 0.980 -3.000 0.306 1.000 N NA
 5869975 5869976 ECS88_1798 ECS88_1799 astD astA TRUE 0.964 -3.000 0.179 1.000 N NA
 5869976 5869977 ECS88_1799 ECS88_1800 astA astC TRUE 0.998 -3.000 0.625 1.000 Y NA
 5869978 5869979 ECS88_1801 ECS88_1802 xthA ydjX FALSE 0.043 167.000 0.016 NA   NA
 5869979 5869980 ECS88_1802 ECS88_1803 ydjX ydjY TRUE 0.943 5.000 0.083 NA   NA
 5869980 5869981 ECS88_1803 ECS88_1804 ydjY ydjZ TRUE 0.943 14.000 0.174 NA   NA
 5869981 5869982 ECS88_1804 ECS88_1805 ydjZ ynjA TRUE 0.960 0.000 0.087 NA   NA
 5869982 5869983 ECS88_1805 ECS88_1806 ynjA ynjB TRUE 0.878 10.000 0.032 NA   NA
 5869983 5869984 ECS88_1806 ECS88_1807 ynjB ynjC TRUE 0.990 18.000 0.627 0.049   NA
 5869984 5869985 ECS88_1807 ECS88_1808 ynjC ynjD TRUE 0.995 0.000 0.602 1.000   NA
 5869985 5869986 ECS88_1808 ECS88_1809 ynjD ynjE TRUE 0.437 67.000 0.111 1.000   NA
 5869988 5869989 ECS88_1811 ECS88_1812 nudG gdhA FALSE 0.004 474.000 0.000 1.000 N NA
 5869990 5869991 ECS88_1813 ECS88_1814 topB selD TRUE 0.860 5.000 0.041 1.000 N NA
 5869991 5869992 ECS88_1814 ECS88_1815 selD   TRUE 0.446 -58.000 0.000 NA   NA
 5869992 5869993 ECS88_1815 ECS88_1816   ydjA TRUE 0.708 26.000 0.000 NA   NA
 5869994 5869995 ECS88_1817 ECS88_1818   sppA TRUE 0.454 -57.000 0.000 NA   NA
 5869995 5869996 ECS88_1818 ECS88_1819 sppA ansA FALSE 0.089 167.000 0.113 1.000 N NA
 5869996 5869997 ECS88_1819 ECS88_1820 ansA pncA TRUE 0.812 11.000 0.040 1.000 N NA
 5869998 5869999 ECS88_1821 ECS88_1822 ydjE ydjF TRUE 0.644 118.000 0.125 1.000 Y NA
 5869999 5870000 ECS88_1822 ECS88_1823 ydjF ydjG FALSE 0.316 137.000 0.269 1.000 N NA
 5870000 5870001 ECS88_1823 ECS88_1824 ydjG ydjH TRUE 0.972 10.000 0.269 1.000 N NA
 5870001 5870002 ECS88_1824 ECS88_1825 ydjH ydjI TRUE 0.996 5.000 0.368 1.000 Y NA
 5870002 5870003 ECS88_1825 ECS88_1826 ydjI ydjJ TRUE 0.942 21.000 0.194 0.016 N NA
 5870003 5870004 ECS88_1826 ECS88_1827 ydjJ ydjK TRUE 0.898 17.000 0.167 1.000 N NA
 5870004 5870005 ECS88_1827 ECS88_1828 ydjK ydjL TRUE 0.875 27.000 0.250 1.000 N NA
 5870005 5870006 ECS88_1828 ECS88_1829 ydjL yeaC FALSE 0.009 370.000 0.000 NA   NA
 5870006 5870007 ECS88_1829 ECS88_1831 yeaC msrB TRUE 0.778 42.000 0.216 NA   NA
 5870008 5870009 ECS88_1832 ECS88_1833 gapA yeaD TRUE 0.764 84.000 0.154 1.000 Y NA
 5870010 5870011 ECS88_1834 ECS88_1835 yeaE mipA FALSE 0.243 90.000 0.067 NA   NA
 5870012 5870013 ECS88_1836 ECS88_1837 yeaG yeaH TRUE 0.756 113.000 0.683 NA   NA
 5870013 5870014 ECS88_1837 ECS88_1838 yeaH yeaI FALSE 0.103 147.000 0.000 NA   NA
 5870014 5870015 ECS88_1838 ECS88_1839 yeaI yeaJ TRUE 0.945 1.000 0.000 NA   NA
 5870015 5870016 ECS88_1839 ECS88_1840 yeaJ yeaJ TRUE 0.837 16.000 0.000 NA   NA
 5870016 5870017 ECS88_1840 ECS88_1841 yeaJ yeaK TRUE 0.506 43.000 0.000 NA   NA
 5870021 5870022 ECS88_1846 ECS88_1847 yeaN yeaO FALSE 0.242 55.000 0.007 NA   NA
 5870025 5870026 ECS88_1850 ECS88_1851 yeaQ yoaG FALSE 0.101 148.000 0.000 NA   NA
 5870026 5870027 ECS88_1851 ECS88_1852 yoaG yeaR TRUE 0.932 4.000 0.000 NA   NA
 5870027 5870028 ECS88_1852 ECS88_1853 yeaR yeaS FALSE 0.036 173.000 0.000 NA N NA
 5870028 5870029 ECS88_1853 ECS88_1854 yeaS   FALSE 0.151 127.000 0.000 NA   NA
 5870031 5870032 ECS88_1856 ECS88_1857 rnd fadD FALSE 0.325 70.000 0.115 1.000 N NA
 5870032 5870033 ECS88_1857 ECS88_1858 fadD yeaY FALSE 0.072 205.000 0.169 1.000 N NA
 5870033 5870034 ECS88_1858 ECS88_1859 yeaY yeaZ FALSE 0.291 40.000 0.024 1.000 N NA
 5870034 5870035 ECS88_1859 ECS88_1860 yeaZ yoaA FALSE 0.329 58.000 0.082 1.000 N NA
 5870036 5870037 ECS88_1861 ECS88_1862 yoaB yoaC FALSE 0.009 362.000 0.000 NA   NA
 5870039 5870040 ECS88_1864 ECS88_1865 pabB yeaB TRUE 0.964 4.000 0.116 1.000   NA
 5870040 5870041 ECS88_1865 ECS88_1866 yeaB sdaA FALSE 0.307 184.000 0.409 1.000   NA
 5870041 5870042 ECS88_1866 ECS88_1867 sdaA adrB TRUE 0.434 131.000 0.389 NA N NA
 5870044 5870045 ECS88_1869 ECS88_1870 manX manY TRUE 0.839 63.000 0.000 0.018 Y NA
 5870045 5870046 ECS88_1870 ECS88_1871 manY manZ TRUE 0.999 4.000 0.939 0.018 Y NA
 5870046 5870047 ECS88_1871 ECS88_1872 manZ yobD TRUE 0.902 55.000 0.755 NA   NA
 5870047 5870048 ECS88_1872 ECS88_misc_RNA_30 yobD   FALSE 0.043 198.000 0.000 NA   NA
 5870048 5870049 ECS88_misc_RNA_30 ECS88_1873   yebN FALSE 0.194 109.000 0.000 NA   NA
 5870050 5870051 ECS88_1874 ECS88_1875 rrmA cspC FALSE 0.069 166.000 0.038 1.000   NA
 5870051 5870052 ECS88_1875 ECS88_1876 cspC yobF TRUE 0.958 13.000 0.214 NA   NA
 5870052 5870053 ECS88_1876 ECS88_1877 yobF yebO FALSE 0.004 671.000 0.000 NA   NA
 5870053 5870054 ECS88_1877 ECS88_1878 yebO yobG TRUE 0.755 75.000 0.500 NA   NA
 5870058 5870059 ECS88_1882 ECS88_1883 htpX prc FALSE 0.078 192.000 0.042 0.020 N NA
 5870059 5870060 ECS88_1883 ECS88_1884 prc proQ TRUE 0.928 20.000 0.304 NA N NA
 5870060 5870061 ECS88_1884 ECS88_1885 proQ yebR TRUE 0.627 97.000 0.081 NA Y NA
 5870062 5870063 ECS88_1886 ECS88_1887 yebS yebT TRUE 0.961 -31.000 0.840 NA   NA
 5870063 5870064 ECS88_1887 ECS88_1888 yebT yebU TRUE 0.703 80.000 0.420 NA   NA
 5870064 5870065 ECS88_1888 ECS88_1889 yebU yebV FALSE 0.269 118.000 0.121 NA   NA
 5870065 5870066 ECS88_1889 ECS88_1890 yebV yebW TRUE 0.953 21.000 0.353 NA   NA
 5870069 5870070 ECS88_misc_RNA_32 ECS88_1892 ryeB   FALSE 0.330 -90.000 0.000 NA   NA
 5870070 5870071 ECS88_1892 ECS88_1893   yebY TRUE 0.814 18.000 0.000 NA   NA
 5870071 5870072 ECS88_1893 ECS88_1894 yebY yebZ TRUE 0.990 13.000 0.704 NA   NA
 5870072 5870073 ECS88_1894 ECS88_1895 yebZ yobA TRUE 0.994 4.000 0.613 1.000   NA
 5870074 5870075 ECS88_1896 ECS88_1897 holE yobB TRUE 0.490 102.000 0.222 1.000   NA
 5870075 5870076 ECS88_1897 ECS88_1898 yobB exoX TRUE 0.966 23.000 0.500 1.000   NA
 5870077 5870078 ECS88_1899 ECS88_1901 ptrB yebE FALSE 0.050 209.000 0.092 NA   NA
 5870078 5870079 ECS88_1901 ECS88_1903 yebE yebF FALSE 0.007 327.000 0.028 NA   NA
 5870079 5870080 ECS88_1903 ECS88_1904 yebF yebG FALSE 0.281 55.000 0.027 NA   NA
 5870082 5870083 ECS88_1906 ECS88_1907 eda edd TRUE 0.979 37.000 0.523 1.000 Y NA
 5870086 5870087 ECS88_1910 ECS88_1911 yebK pykA FALSE 0.118 128.000 0.071 1.000 N NA
 5870088 5870089 ECS88_1912 ECS88_1913 lpxM yebA TRUE 0.781 119.000 0.299 1.000 Y NA
 5870089 5870090 ECS88_1913 ECS88_1914 yebA znuA TRUE 0.881 16.000 0.131 1.000 N NA
 5870091 5870092 ECS88_1915 ECS88_1916 znuC znuB TRUE 0.999 -3.000 0.755 0.084 Y NA
 5870093 5870094 ECS88_1917 ECS88_1918 ruvB ruvA TRUE 0.999 9.000 0.549 0.001 Y NA
 5870096 5870097 ECS88_1921 ECS88_1922 ruvC yebC TRUE 0.870 35.000 0.277 NA   NA
 5870097 5870098 ECS88_1922 ECS88_1923 yebC nudB TRUE 0.599 29.000 0.035 NA   NA
 5870098 5870099 ECS88_1923 ECS88_1924 nudB aspS TRUE 0.902 2.000 0.050 1.000 N NA
 5870100 5870101 ECS88_1925 ECS88_1926 yecD yecE TRUE 0.947 -3.000 0.089 NA   NA
 5870101 5870102 ECS88_1926 ECS88_1927 yecE yecN TRUE 0.545 53.000 0.126 NA   NA
 5870102 5870103 ECS88_1927 ECS88_1928 yecN yecO TRUE 0.612 41.000 0.089 NA   NA
 5870103 5870104 ECS88_1928 ECS88_1929 yecO yecP TRUE 0.984 -3.000 0.315 NA   NA
 5870105 5870106 ECS88_1930 ECS88_1931 torZ torY TRUE 0.992 25.000 0.481 0.043 Y NA
 5870106 5870107 ECS88_1931 ECS88_1932 torY cutC FALSE 0.005 388.000 0.000 1.000 N NA
 5870107 5870108 ECS88_1932 ECS88_1933 cutC yecM TRUE 0.860 14.000 0.057 NA   NA
 5870110 5870111 ECS88_1936 ECS88_1937 flhE flhA TRUE 0.991 0.000 0.158 0.002   NA
 5870111 5870112 ECS88_1937 ECS88_1938 flhA flhB TRUE 0.994 -7.000 0.287 0.008 Y NA
 5870112 5870113 ECS88_1938 ECS88_1939 flhB cheZ FALSE 0.183 209.000 0.000 1.000 Y NA
 5870113 5870114 ECS88_1939 ECS88_1940 cheZ cheY TRUE 0.982 11.000 0.000 1.000 Y NA
 5870114 5870115 ECS88_1940 ECS88_1941 cheY cheB TRUE 0.985 15.000 0.000 0.010 Y NA
 5870115 5870116 ECS88_1941 ECS88_1942 cheB cheR TRUE 0.989 3.000 0.000 1.000 Y NA
 5870116 5870117 ECS88_1942 ECS88_1943 cheR tar FALSE 0.074 291.000 0.037 1.000 Y NA
 5870119 5870120 ECS88_1944 ECS88_1945 cheW cheA TRUE 0.995 21.000 0.447 0.003 Y NA
 5870120 5870121 ECS88_1945 ECS88_1946 cheA motB TRUE 0.999 5.000 0.913 1.000 Y NA
 5870121 5870122 ECS88_1946 ECS88_1947 motB motA TRUE 0.997 -3.000 0.429 1.000 Y NA
 5870122 5870123 ECS88_1947 ECS88_1948 motA flhC TRUE 0.570 127.000 0.408 1.000   NA
 5870123 5870124 ECS88_1948 ECS88_1949 flhC flhD TRUE 0.984 3.000 0.000 0.001   NA
 5870126 5870127 ECS88_1951 ECS88_1952 otsA otsB TRUE 0.964 -25.000 0.068 0.000 Y NA
 5870127 5870128 ECS88_1952 ECS88_1954 otsB araH FALSE 0.293 167.000 0.037 1.000 Y NA
 5870128 5870129 ECS88_1954 ECS88_1955 araH araG TRUE 0.996 12.000 0.451 1.000 Y NA
 5870129 5870130 ECS88_1955 ECS88_1956 araG araF TRUE 0.959 70.000 0.917 NA Y NA
 5870132 5870133 ECS88_1958 ECS88_misc_RNA_34 yecJ isrB FALSE 0.250 81.000 0.000 NA   NA
 5870134 5870135 ECS88_1959 ECS88_1960   yecR FALSE 0.037 207.000 0.000 NA   NA
 5870135 5870136 ECS88_1960 ECS88_1961 yecR ftn FALSE 0.068 172.000 0.000 NA   NA
 5870139 5870140 ECS88_1964 ECS88_tRNA79 yecA   FALSE 0.044 196.000 0.000 NA   NA
 5870140 5870141 ECS88_tRNA79 ECS88_tRNA78     TRUE 0.876 13.000 0.000 NA   NA
 5870141 5870142 ECS88_tRNA78 ECS88_tRNA77     FALSE 0.378 55.000 0.000 NA   NA
 5870142 5870143 ECS88_tRNA77 ECS88_1966   pgsA FALSE 0.091 152.000 0.000 NA   NA
 5870143 5870144 ECS88_1966 ECS88_1967 pgsA uvrC TRUE 0.609 57.000 0.227 1.000 N NA
 5870144 5870145 ECS88_1967 ECS88_1968 uvrC uvrY TRUE 0.969 -3.000 0.086 0.019 N NA
 5870147 5870148 ECS88_1970 ECS88_1971 sdiA yecC FALSE 0.021 230.000 0.071 1.000 N NA
 5870148 5870149 ECS88_1971 ECS88_1972 yecC yecS TRUE 0.992 -3.000 0.150 1.000 Y NA
 5870149 5870150 ECS88_1972 ECS88_1973 yecS yedO TRUE 0.970 15.000 0.050 1.000 Y NA
 5870150 5870151 ECS88_1973 ECS88_1974 yedO fliY TRUE 0.879 105.000 0.469 1.000 Y NA
 5870151 5870152 ECS88_1974 ECS88_1975 fliY fliZ TRUE 0.587 88.000 0.280 1.000   NA
 5870152 5870153 ECS88_1975 ECS88_1976 fliZ fliA TRUE 0.616 46.000 0.108 1.000   NA
 5870153 5870154 ECS88_1976 ECS88_1977 fliA FliC FALSE 0.003 320.000 0.012 1.000 N NA
 5870155 5870156 ECS88_1978 ECS88_1979 fliD fliS TRUE 0.989 25.000 0.284 0.002 Y NA
 5870156 5870157 ECS88_1979 ECS88_1980 fliS fliT TRUE 0.990 0.000 0.324 1.000   NA
 5870157 5870158 ECS88_1980 ECS88_1981 fliT amyA FALSE 0.397 78.000 0.115 1.000   NA
 5870160 5870161 ECS88_1983 ECS88_1984 yedE yedF TRUE 0.996 -3.000 0.844 NA   NA
 5870161 5870162 ECS88_1984 ECS88_1985 yedF yedK FALSE 0.194 109.000 0.000 NA   NA
 5870162 5870163 ECS88_1985 ECS88_1986 yedK nmpC FALSE 0.005 513.000 0.000 NA   NA
 5870164 5870165 ECS88_1987 ECS88_1988 ybcM ybcL TRUE 0.992 10.000 0.625 NA   NA
 5870165 5870166 ECS88_1988 ECS88_1989 ybcL emrE FALSE 0.071 169.000 0.000 NA   NA
 5870166 5870167 ECS88_1989 ECS88_1990 emrE fliE FALSE 0.052 165.000 0.000 1.000 N NA
 5870168 5870169 ECS88_1991 ECS88_1992 fliF fliG TRUE 0.993 -7.000 0.220 0.004 Y NA
 5870169 5870170 ECS88_1992 ECS88_1993 fliG fliH TRUE 0.986 -7.000 0.000 0.003 Y NA
 5870170 5870171 ECS88_1993 ECS88_1994 fliH fliI TRUE 0.991 0.000 0.000 1.000 Y NA
 5870171 5870172 ECS88_1994 ECS88_1995 fliI fliJ TRUE 0.948 19.000 0.006 1.000 Y NA
 5870172 5870173 ECS88_1995 ECS88_1996 fliJ fliK TRUE 0.998 -3.000 0.317 0.004 Y NA
 5870173 5870174 ECS88_1996 ECS88_1997 fliK fliL TRUE 0.681 105.000 0.119 1.000 Y NA
 5870174 5870175 ECS88_1997 ECS88_1998 fliL fliM TRUE 0.999 5.000 0.957 0.001 Y NA
 5870175 5870176 ECS88_1998 ECS88_1999 fliM fliN TRUE 0.996 -3.000 0.137 0.001 Y NA
 5870176 5870177 ECS88_1999 ECS88_2000 fliN fliO TRUE 0.998 3.000 0.443 1.000 Y NA
 5870177 5870178 ECS88_2000 ECS88_2001 fliO fliP TRUE 0.996 0.000 0.203 1.000 Y NA
 5870178 5870179 ECS88_2001 ECS88_2002 fliP fliQ TRUE 0.999 10.000 0.827 0.008 Y NA
 5870179 5870180 ECS88_2002 ECS88_2003 fliQ fliR TRUE 0.993 9.000 0.000 0.002 Y NA
 5870180 5870181 ECS88_2003 ECS88_2004 fliR rcsA FALSE 0.011 285.000 0.000 1.000 N NA
 5870182 5870183 ECS88_2006 ECS88_misc_RNA_35 dsrB dsrB FALSE 0.229 -186.000 0.000 NA   NA
 5870187 5870188 ECS88_2009 ECS88_2010 yedQ   FALSE 0.371 -79.000 0.000 NA   NA
 5870188 5870189 ECS88_2010 ECS88_2011   yedI FALSE 0.011 323.000 0.000 NA   NA
 5870191 5870192 ECS88_2013 ECS88_2014 vsr dcm TRUE 0.951 -19.000 0.048 0.055 Y NA
 5870192 5870193 ECS88_2014 ECS88_2015 dcm yedJ FALSE 0.362 67.000 0.074 1.000   NA
 5870193 5870194 ECS88_2015 ECS88_2016 yedJ yedR TRUE 0.552 40.000 0.062 NA   NA
 5870195 5870196 ECS88_misc_RNA_37 ECS88_2017 rseX   FALSE 0.016 282.000 0.000 NA   NA
 5870196 5870197 ECS88_2017 ECS88_2019   hchA FALSE 0.005 596.000 0.000 NA   NA
 5870198 5870199 ECS88_2020 ECS88_2021 yedV yedW TRUE 1.000 0.000 0.857 0.001 Y NA
 5870200 5870201 ECS88_2022 ECS88_2023 yedX yedY FALSE 0.221 109.000 0.000 1.000   NA
 5870201 5870202 ECS88_2023 ECS88_2024 yedY yedZ TRUE 0.998 1.000 0.790 0.042   NA
 5870202 5870203 ECS88_2024 ECS88_2025 yedZ yodA FALSE 0.024 257.000 0.000 1.000   NA
 5870205 5870206 ECS88_2028 ECS88_tRNA22 yeeI   FALSE 0.207 101.000 0.000 NA   NA
 5870209 5870210 ECS88_2032 ECS88_2033 irp irp TRUE 0.796 28.000 0.176 NA N NA
 5870210 5870211 ECS88_2033 ECS88_2034 irp irp FALSE 0.303 -130.000 0.130 NA N NA
 5870211 5870212 ECS88_2034 ECS88_2035 irp irp TRUE 0.993 -40.000 0.913 0.006 Y NA
 5870213 5870214 ECS88_2036 ECS88_2037 ybtA irp FALSE 0.235 173.000 0.333 1.000 N NA
 5870214 5870215 ECS88_2037 ECS88_2038 irp irp TRUE 0.877 88.000 0.158 0.001 Y NA
 5870215 5870216 ECS88_2038 ECS88_2039 irp irp TRUE 0.962 -63.000 0.333 0.026 Y NA
 5870216 5870217 ECS88_2039 ECS88_2040 irp irp TRUE 0.997 -3.000 0.406 1.000 Y NA
 5870217 5870218 ECS88_2040 ECS88_2041 irp irp TRUE 0.990 4.000 0.094 1.000 Y NA
 5870218 5870219 ECS88_2041 ECS88_2043 irp fyuA FALSE 0.180 131.000 0.125 1.000 N NA
 5870219 5870220 ECS88_2043 ECS88_2044 fyuA yeeJ FALSE 0.005 594.000 0.000 NA   NA
 5870220 5870221 ECS88_2044 ECS88_2045 yeeJ yeeJ FALSE 0.384 -73.000 0.000 NA   NA
 5870221 5870222 ECS88_2045 ECS88_2046 yeeJ yeeJ TRUE 0.603 36.000 0.000 NA   NA
 5870224 5870225 ECS88_2049 ECS88_2050 shiA amn FALSE 0.077 102.000 0.021 1.000 N NA
 5870225 5870226 ECS88_2050 ECS88_2051 amn yeeN FALSE 0.010 343.000 0.000 NA   NA
 5870227 5870228 ECS88_tRNA75 ECS88_2052   yeeO FALSE 0.207 101.000 0.000 NA   NA
 5870230 5870231 ECS88_2053 ECS88_2054 cbl nac TRUE 0.852 102.000 0.222 0.050 Y NA
 5870233 5870234 ECS88_2055 ECS88_2056 erfK cobT FALSE 0.200 65.000 0.015 NA   NA
 5870234 5870235 ECS88_2056 ECS88_2057 cobT cobS TRUE 0.990 12.000 0.056 0.003 Y NA
 5870235 5870236 ECS88_2057 ECS88_2058 cobS cobU TRUE 0.987 -3.000 0.000 1.000 Y NA
 5870236 5870237 ECS88_2058 ECS88_2059 cobU   FALSE 0.091 152.000 0.000 NA   NA
 5870237 5870238 ECS88_2059 ECS88_2061     FALSE 0.049 191.000 0.000 NA   NA
 5870238 5870239 ECS88_2061 ECS88_2063     FALSE 0.003 1246.000 0.000 NA   NA
 5870239 5870240 ECS88_2063 ECS88_2064     FALSE 0.009 354.000 0.000 NA   NA
 5870241 5870242 ECS88_2065 ECS88_2066     FALSE 0.198 107.000 0.000 NA   NA
 5870242 5870243 ECS88_2066 ECS88_2067     FALSE 0.044 196.000 0.000 NA   NA
 5870243 5870244 ECS88_2067 ECS88_2068     TRUE 0.865 14.000 0.000 NA   NA
 5870244 5870245 ECS88_2068 ECS88_2069     FALSE 0.363 57.000 0.000 NA   NA
 5870245 5870246 ECS88_2069 ECS88_2070     TRUE 0.942 3.000 0.067 NA   NA
 5870247 5870248 ECS88_2071 ECS88_2072     TRUE 0.494 44.000 0.000 NA   NA
 5870248 5870249 ECS88_2072 ECS88_2073     FALSE 0.254 79.000 0.000 NA   NA
 5870249 5870250 ECS88_2073 ECS88_2074     FALSE 0.016 284.000 0.000 NA   NA
 5870250 5870251 ECS88_2074 ECS88_2075     FALSE 0.310 -99.000 0.000 NA   NA
 5870251 5870252 ECS88_2075 ECS88_2076     FALSE 0.021 254.000 0.000 NA   NA
 5870252 5870253 ECS88_2076 ECS88_2079     FALSE 0.004 759.000 0.000 NA   NA
 5870253 5870254 ECS88_2079 ECS88_2080     TRUE 0.914 31.000 0.000 NA Y NA
 5870254 5870255 ECS88_2080 ECS88_2081     TRUE 0.986 -3.000 0.000 NA Y NA
 5870256 5870257 ECS88_2082 ECS88_2083     FALSE 0.254 79.000 0.000 NA   NA
 5870257 5870258 ECS88_2083 ECS88_2085     FALSE 0.007 428.000 0.000 NA   NA
 5870259 5870260 ECS88_2086 ECS88_2087     FALSE 0.137 132.000 0.000 NA   NA
 5870260 5870261 ECS88_2087 ECS88_2088     TRUE 0.966 16.000 0.000 NA Y NA
 5870262 5870263 ECS88_2089 ECS88_2090     FALSE 0.004 1119.000 0.000 NA   NA
 5870263 5870264 ECS88_2090 ECS88_2091     TRUE 0.482 45.000 0.000 NA   NA
 5870264 5870265 ECS88_2091 ECS88_2092     FALSE 0.093 218.000 0.000 0.008   NA
 5870265 5870266 ECS88_2092 ECS88_2093     TRUE 0.993 -3.000 0.600 NA   NA
 5870266 5870267 ECS88_2093 ECS88_2094     TRUE 0.995 -3.000 0.800 NA   NA
 5870267 5870268 ECS88_2094 ECS88_2095     TRUE 0.685 28.000 0.000 NA   NA
 5870268 5870269 ECS88_2095 ECS88_2096     TRUE 0.837 16.000 0.000 NA   NA
 5870269 5870270 ECS88_2096 ECS88_2097     FALSE 0.030 221.000 0.000 NA   NA
 5870270 5870271 ECS88_2097 ECS88_2098     FALSE 0.248 82.000 0.000 NA   NA
 5870271 5870272 ECS88_2098 ECS88_2099   yeeS TRUE 0.466 46.000 0.000 NA   NA
 5870272 5870273 ECS88_2099 ECS88_2100 yeeS yeeT FALSE 0.322 63.000 0.000 NA   NA
 5870273 5870274 ECS88_2100 ECS88_2101 yeeT yeeU FALSE 0.265 74.000 0.000 NA   NA
 5870274 5870275 ECS88_2101 ECS88_2102 yeeU yeeV FALSE 0.231 89.000 0.000 NA   NA
 5870275 5870276 ECS88_2102 ECS88_2103 yeeV yeeW FALSE 0.198 107.000 0.000 NA   NA
 5870276 5870277 ECS88_2103 ECS88_2104 yeeW yoeF FALSE 0.006 441.000 0.000 NA   NA
 5870278 5870279 ECS88_2106 ECS88_2107 yeeX yeeA FALSE 0.402 106.000 0.180 NA   NA
 5870279 5870280 ECS88_2107 ECS88_2108 yeeA sbmC FALSE 0.060 199.000 0.096 NA   NA
 5870280 5870281 ECS88_2108 ECS88_2109 sbmC dacD FALSE 0.170 119.000 0.110 NA N NA
 5870283 5870284 ECS88_2111 ECS88_2112 yeeD yeeE TRUE 0.978 14.000 0.419 NA   NA
 5870284 5870285 ECS88_2112 ECS88_2113 yeeE yeeF FALSE 0.061 179.000 0.000 NA   NA
 5870285 5870286 ECS88_2113 ECS88_2114 yeeF yeeY FALSE 0.012 267.000 0.000 1.000 N NA
 5870286 5870287 ECS88_2114 ECS88_2115 yeeY yeeZ FALSE 0.204 46.000 0.015 1.000 N NA
 5870287 5870288 ECS88_2115 ECS88_2116 yeeZ yoeB FALSE 0.246 83.000 0.000 NA   NA
 5870288 5870289 ECS88_2116 ECS88_2117 yoeB yefM TRUE 0.987 -3.000 0.366 NA   NA
 5870290 5870291 ECS88_5090 ECS88_2118 hisL hisG FALSE 0.235 146.000 0.003 0.002   NA
 5870291 5870292 ECS88_2118 ECS88_2119 hisG hisD TRUE 0.997 6.000 0.171 0.002 Y NA
 5870292 5870293 ECS88_2119 ECS88_2120 hisD hisC TRUE 0.998 -3.000 0.294 0.002 Y NA
 5870293 5870294 ECS88_2120 ECS88_2121 hisC hisB TRUE 0.999 0.000 0.341 0.002 Y NA
 5870294 5870295 ECS88_2121 ECS88_2122 hisB hisH TRUE 0.997 0.000 0.128 0.002 Y NA
 5870295 5870296 ECS88_2122 ECS88_2123 hisH hisA TRUE 0.998 0.000 0.210 0.002 Y NA
 5870296 5870297 ECS88_2123 ECS88_2124 hisA hisF TRUE 0.992 -18.000 0.433 0.002 Y NA
 5870297 5870298 ECS88_2124 ECS88_2125 hisF hisI TRUE 0.997 -6.000 0.430 0.002 Y NA
 5870299 5870300 ECS88_2126 ECS88_2127 cld ugd FALSE 0.410 147.000 0.000 1.000 Y NA
 5870300 5870301 ECS88_2127 ECS88_2128 ugd gnd FALSE 0.015 249.000 0.000 1.000 N NA
 5870301 5870302 ECS88_2128 ECS88_2130 gnd rmlA FALSE 0.040 181.000 0.000 1.000 N NA
 5870302 5870303 ECS88_2130 ECS88_2131 rmlA wbvC FALSE 0.074 145.000 0.000 1.000 N NA
 5870303 5870304 ECS88_2131 ECS88_2132 wbvC wzy TRUE 0.558 -34.000 0.000 NA   NA
 5870304 5870305 ECS88_2132 ECS88_2133 wzy wbvB TRUE 0.840 -7.000 0.000 NA   NA
 5870305 5870306 ECS88_2133 ECS88_2134 wbvB wzx TRUE 0.745 -13.000 0.000 NA   NA
 5870306 5870307 ECS88_2134 ECS88_2135 wzx wbvA TRUE 0.745 -13.000 0.000 NA   NA
 5870307 5870308 ECS88_2135 ECS88_2136 wbvA tll TRUE 0.943 2.000 0.000 NA   NA
 5870308 5870309 ECS88_2136 ECS88_2137 tll rmlC TRUE 0.686 63.000 0.012 1.000 Y NA
 5870309 5870310 ECS88_2137 ECS88_2138 rmlC rmlB TRUE 0.692 72.000 0.000 1.000 Y NA
 5870310 5870311 ECS88_2138 ECS88_2139 rmlB galF FALSE 0.049 372.000 0.000 1.000 Y NA
 5870311 5870312 ECS88_2139 ECS88_2140 galF wcaM FALSE 0.212 175.000 0.259 NA   NA
 5870312 5870313 ECS88_2140 ECS88_2141 wcaM wcaL TRUE 0.976 11.000 0.292 NA   NA
 5870313 5870314 ECS88_2141 ECS88_2142 wcaL wcaK TRUE 0.949 -3.000 0.095 NA   NA
 5870314 5870315 ECS88_2142 ECS88_2143 wcaK wzxC FALSE 0.025 276.000 0.095 NA   NA
 5870315 5870316 ECS88_2143 ECS88_2144 wzxC wcaJ TRUE 0.987 2.000 0.304 NA   NA
 5870316 5870317 ECS88_2144 ECS88_2145 wcaJ cpsG TRUE 0.816 55.000 0.538 NA N NA
 5870317 5870318 ECS88_2145 ECS88_2146 cpsG cpsB TRUE 0.462 193.000 1.000 1.000 N NA
 5870318 5870319 ECS88_2146 ECS88_2147 cpsB wcaI TRUE 0.992 3.000 0.123 1.000 Y NA
 5870319 5870320 ECS88_2147 ECS88_2148 wcaI nudD TRUE 0.939 -3.000 0.108 1.000 N NA
 5870320 5870321 ECS88_2148 ECS88_2149 nudD fcl TRUE 0.991 3.000 0.217 0.000 N NA
 5870321 5870322 ECS88_2149 ECS88_2150 fcl gmd TRUE 0.995 3.000 0.000 0.007 Y NA
 5870322 5870323 ECS88_2150 ECS88_2151 gmd wcaF TRUE 0.636 27.000 0.022 1.000   NA
 5870323 5870324 ECS88_2151 ECS88_2152 wcaF wcaE TRUE 0.861 16.000 0.077 NA   NA
 5870324 5870325 ECS88_2152 ECS88_2153 wcaE wcaD TRUE 0.638 81.000 0.333 NA   NA
 5870325 5870326 ECS88_2153 ECS88_2154 wcaD wcaC TRUE 0.918 -25.000 0.400 NA   NA
 5870326 5870327 ECS88_2154 ECS88_2155 wcaC wcaB TRUE 0.976 -3.000 0.259 1.000 N NA
 5870327 5870328 ECS88_2155 ECS88_2156 wcaB wcaA TRUE 0.983 3.000 0.259 NA   NA
 5870328 5870329 ECS88_2156 ECS88_2157 wcaA wzc FALSE 0.144 129.000 0.000 NA   NA
 5870329 5870330 ECS88_2157 ECS88_2158 wzc wzb TRUE 0.909 3.000 0.000 1.000 N NA
 5870330 5870331 ECS88_2158 ECS88_2159 wzb wza TRUE 0.977 6.000 0.286 1.000 N NA
 5870332 5870333 ECS88_2160 ECS88_2161 yegH   FALSE 0.263 75.000 0.000 NA   NA
 5870333 5870334 ECS88_2161 ECS88_2162     TRUE 0.869 -28.000 0.286 NA   NA
 5870335 5870336 ECS88_2163 ECS88_2164 asmA dcd TRUE 0.614 22.000 0.057 NA N NA
 5870336 5870337 ECS88_2164 ECS88_2165 dcd udk TRUE 0.683 92.000 0.098 1.000 Y NA
 5870341 5870342 ECS88_2170 ECS88_2171 yegI yegK TRUE 0.964 -12.000 0.455 1.000   NA
 5870342 5870343 ECS88_2171 ECS88_2172 yegK yegL TRUE 0.928 -3.000 0.000 NA   NA
 5870344 5870345 ECS88_misc_RNA_38 ECS88_misc_RNA_39 ryeC rygC FALSE 0.272 -124.000 0.000 NA   NA
 5870345 5870346 ECS88_misc_RNA_39 ECS88_misc_RNA_40 rygC rygD FALSE 0.285 -115.000 0.000 NA   NA
 5870346 5870347 ECS88_misc_RNA_40 ECS88_misc_RNA_41 rygD ryeD FALSE 0.052 187.000 0.000 NA   NA
 5870347 5870348 ECS88_misc_RNA_41 ECS88_2173 ryeD mdtA FALSE 0.019 264.000 0.000 NA   NA
 5870348 5870349 ECS88_2173 ECS88_2174 mdtA mdtB TRUE 0.903 0.000 0.000 NA N NA
 5870349 5870350 ECS88_2174 ECS88_2175 mdtB mdtC TRUE 0.990 1.000 0.062 NA Y NA
 5870350 5870351 ECS88_2175 ECS88_2176 mdtC mdtD TRUE 0.990 1.000 0.438 NA N NA
 5870351 5870352 ECS88_2176 ECS88_2177 mdtD baeS TRUE 0.951 -3.000 0.139 1.000 N NA
 5870352 5870353 ECS88_2177 ECS88_2178 baeS baeR TRUE 0.998 -3.000 0.591 1.000 Y NA
 5870353 5870354 ECS88_2178 ECS88_2179 baeR yegP FALSE 0.062 180.000 0.062 NA   NA
 5870355 5870356 ECS88_2180 ECS88_2181     FALSE 0.404 52.000 0.000 NA   NA
 5870356 5870357 ECS88_2181 ECS88_2182     TRUE 0.904 -28.000 0.375 NA   NA
 5870357 5870358 ECS88_2182 ECS88_2183     TRUE 0.997 0.000 1.000 NA   NA
 5870359 5870360 ECS88_2184 ECS88_misc_RNA_42 yegQ ryeE FALSE 0.246 83.000 0.000 NA   NA
 5870361 5870362 ECS88_2185 ECS88_2186 ogrK GpD FALSE 0.248 82.000 0.000 NA   NA
 5870362 5870363 ECS88_2186 ECS88_2187 GpD GpU TRUE 0.995 0.000 0.600 NA   NA
 5870363 5870364 ECS88_2187 ECS88_2188 GpU GpT TRUE 0.986 15.000 0.625 NA   NA
 5870364 5870365 ECS88_2188 ECS88_2189 GpT GpE FALSE 0.345 145.000 0.286 NA   NA
 5870365 5870366 ECS88_2189 ECS88_2190 GpE   TRUE 0.806 57.000 0.429 NA   NA
 5870366 5870367 ECS88_2190 ECS88_2191     TRUE 0.876 13.000 0.000 NA   NA
 5870369 5870370 ECS88_2193 ECS88_2194     TRUE 0.927 5.000 0.000 NA   NA
 5870370 5870371 ECS88_2194 ECS88_2195     FALSE 0.007 422.000 0.000 NA   NA
 5870371 5870372 ECS88_2195 ECS88_2196     TRUE 0.932 4.000 0.000 NA   NA
 5870372 5870373 ECS88_2196 ECS88_2197     TRUE 0.995 11.000 1.000 NA   NA
 5870373 5870374 ECS88_2197 ECS88_2198     TRUE 0.986 -7.000 0.667 NA   NA
 5870374 5870375 ECS88_2198 ECS88_2199     TRUE 0.996 5.000 1.000 NA   NA
 5870375 5870376 ECS88_2199 ECS88_2200     TRUE 0.988 -3.000 0.400 NA   NA
 5870378 5870379 ECS88_2202 ECS88_2203     TRUE 0.976 -7.000 0.444 NA   NA
 5870379 5870380 ECS88_2203 ECS88_2204     TRUE 0.887 -37.000 0.400 NA   NA
 5870380 5870381 ECS88_2204 ECS88_2205     TRUE 0.438 -262.000 0.200 NA   NA
 5870381 5870382 ECS88_2205 ECS88_2206     TRUE 0.904 -12.000 0.200 NA   NA
 5870382 5870383 ECS88_2206 ECS88_2207     TRUE 0.980 15.000 0.500 NA   NA
 5870383 5870384 ECS88_2207 ECS88_2208     TRUE 0.994 0.000 0.500 NA   NA
 5870384 5870385 ECS88_2208 ECS88_2209     TRUE 0.986 4.000 0.333 NA   NA
 5870385 5870386 ECS88_2209 ECS88_2210     TRUE 0.785 -69.000 0.333 NA   NA
 5870386 5870387 ECS88_2210 ECS88_2211     TRUE 0.982 40.000 1.000 0.002   NA
 5870387 5870388 ECS88_2211 ECS88_2212     TRUE 0.932 4.000 0.000 NA   NA
 5870389 5870390 ECS88_2213 ECS88_2214     TRUE 0.995 12.000 0.400 1.000 Y NA
 5870391 5870392 ECS88_2215 ECS88_2216     FALSE 0.344 59.000 0.000 NA   NA
 5870393 5870394 ECS88_2217 ECS88_2218     TRUE 0.947 0.000 0.000 NA   NA
 5870395 5870396 ECS88_2219 ECS88_2220     TRUE 0.852 15.000 0.000 NA   NA
 5870396 5870397 ECS88_2220 ECS88_2221     TRUE 0.475 -52.000 0.000 NA   NA
 5870397 5870398 ECS88_2221 ECS88_2222     TRUE 0.969 -3.000 0.167 NA   NA
 5870398 5870399 ECS88_2222 ECS88_2223     FALSE 0.013 302.000 0.000 NA   NA
 5870399 5870400 ECS88_2223 ECS88_2224     TRUE 0.658 31.000 0.000 NA   NA
 5870400 5870401 ECS88_2224 ECS88_2225     TRUE 0.928 -3.000 0.000 NA   NA
 5870401 5870402 ECS88_2225 ECS88_2226   cox TRUE 0.745 -13.000 0.000 NA   NA
 5870403 5870404 ECS88_2227 ECS88_2228     FALSE 0.178 116.000 0.000 NA   NA
 5870404 5870405 ECS88_2228 ECS88_2229     TRUE 0.928 -3.000 0.000 NA   NA
 5870408 5870409 ECS88_2232 ECS88_2233 gatR gatD FALSE 0.148 100.000 0.000 1.000 N NA
 5870409 5870410 ECS88_2233 ECS88_2234 gatD gatC FALSE 0.348 48.000 0.000 1.000 N NA
 5870410 5870411 ECS88_2234 ECS88_2235 gatC gatB TRUE 0.993 4.000 0.000 0.018 Y NA
 5870411 5870412 ECS88_2235 ECS88_2236 gatB gatA TRUE 0.956 31.000 0.000 0.012 Y NA
 5870412 5870413 ECS88_2236 ECS88_2237 gatA gatZ TRUE 0.984 10.000 0.000 1.000 Y NA
 5870413 5870414 ECS88_2237 ECS88_2238 gatZ gatY TRUE 0.968 29.000 0.000 0.001 Y NA
 5870414 5870415 ECS88_2238 ECS88_2239 gatY fbaB FALSE 0.269 229.000 0.000 0.002 Y NA
 5870416 5870417 ECS88_2240 ECS88_2241 yegT yegU TRUE 0.987 -3.000 0.364 NA   NA
 5870417 5870418 ECS88_2241 ECS88_2242 yegU yegV TRUE 0.991 -3.000 0.600 NA N NA
 5870419 5870420 ECS88_2243 ECS88_2244 yegW yegX FALSE 0.310 52.000 0.000 1.000 N NA
 5870420 5870421 ECS88_2244 ECS88_2245 yegX thiD FALSE 0.226 65.000 0.000 1.000 N NA
 5870421 5870422 ECS88_2245 ECS88_2246 thiD thiM TRUE 0.993 -3.000 0.037 0.004 Y NA
 5870422 5870423 ECS88_2246 ECS88_misc_RNA_43 thiM   TRUE 0.615 35.000 0.000 NA   NA
 5870423 5870424 ECS88_misc_RNA_43 ECS88_2247   yohL FALSE 0.221 92.000 0.000 NA   NA
 5870425 5870426 ECS88_2248 ECS88_2249 rncA yohN TRUE 0.560 39.000 0.000 NA   NA
 5870427 5870428 ECS88_2250 ECS88_2251 yehA yehB TRUE 0.859 16.000 0.000 1.000   NA
 5870428 5870429 ECS88_2251 ECS88_2252 yehB yehC TRUE 0.997 16.000 1.000 1.000 Y NA
 5870429 5870430 ECS88_2252 ECS88_2253 yehC yehD TRUE 0.819 81.000 0.222 1.000 Y NA
 5870430 5870431 ECS88_2253 ECS88_2254 yehD yehE FALSE 0.014 294.000 0.000 NA   NA
 5870431 5870432 ECS88_2254 ECS88_2255 yehE mrp FALSE 0.020 263.000 0.000 NA   NA
 5870433 5870434 ECS88_2256 ECS88_2257 metG   FALSE 0.113 141.000 0.000 NA   NA
 5870434 5870435 ECS88_2257 ECS88_2258   yehI TRUE 0.913 10.000 0.000 NA   NA
 5870435 5870436 ECS88_2258 ECS88_2260 yehI   FALSE 0.246 83.000 0.000 NA   NA
 5870436 5870437 ECS88_2260 ECS88_2262   yehL FALSE 0.004 904.000 0.000 NA   NA
 5870437 5870438 ECS88_2262 ECS88_2263 yehL yehM TRUE 0.923 7.000 0.000 NA   NA
 5870438 5870439 ECS88_2263 ECS88_2264 yehM yehP TRUE 0.840 -7.000 0.000 NA   NA
 5870439 5870440 ECS88_2264 ECS88_2265 yehP yehQ TRUE 0.928 -3.000 0.000 NA   NA
 5870440 5870441 ECS88_2265 ECS88_2266 yehQ yehR FALSE 0.157 125.000 0.000 NA   NA
 5870442 5870443 ECS88_2267 ECS88_2268 yehS yehT TRUE 0.427 47.000 0.051 NA   NA
 5870443 5870444 ECS88_2268 ECS88_2269 yehT yehU TRUE 0.999 -3.000 0.877 0.013 Y NA
 5870445 5870446 ECS88_2270 ECS88_2271 mlrA yohO FALSE 0.338 60.000 0.000 NA   NA
 5870447 5870448 ECS88_2272 ECS88_2273 yehW yehX TRUE 0.998 5.000 0.542 1.000 Y NA
 5870448 5870449 ECS88_2273 ECS88_2274 yehX yehY TRUE 0.994 -7.000 0.489 1.000 Y NA
 5870449 5870450 ECS88_2274 ECS88_2275 yehY yehZ TRUE 0.994 7.000 0.521 0.046 N NA
 5870450 5870451 ECS88_2275 ECS88_2276 yehZ bglX FALSE 0.054 190.000 0.099 1.000 N NA
 5870453 5870454 ECS88_2278 ECS88_2280 pbpG yohC FALSE 0.129 174.000 0.145 NA   NA
 5870456 5870457 ECS88_2283 ECS88_2284 yohF yohG TRUE 0.425 53.000 0.105 1.000 N NA
 5870457 5870458 ECS88_2284 ECS88_2286 yohG dusC FALSE 0.002 1042.000 0.000 1.000 N NA
 5870459 5870460 ECS88_2287 ECS88_2288 yohJ yohK TRUE 0.987 -3.000 0.340 1.000   NA
 5870460 5870461 ECS88_2288 ECS88_2289 yohK cdd FALSE 0.274 130.000 0.198 1.000 N NA
 5870461 5870462 ECS88_2289 ECS88_2290 cdd sanA FALSE 0.080 150.000 0.045 NA   NA
 5870462 5870463 ECS88_2290 ECS88_2291 sanA yeiS TRUE 0.899 3.000 0.019 NA   NA
 5870463 5870464 ECS88_2291 ECS88_2292 yeiS yeiT FALSE 0.034 194.000 0.036 NA   NA
 5870464 5870465 ECS88_2292 ECS88_2293 yeiT yeiA TRUE 0.815 -6.000 0.062 1.000 N NA
 5870466 5870467 ECS88_2294 ECS88_2295 mglC mglA TRUE 0.997 16.000 0.905 1.000 Y NA
 5870467 5870468 ECS88_2295 ECS88_2296 mglA mglB TRUE 0.873 61.000 0.250 NA Y NA
 5870468 5870469 ECS88_2296 ECS88_2297 mglB galS FALSE 0.009 280.000 0.000 NA N NA
 5870471 5870472 ECS88_2299 ECS88_2300 yeiB folE TRUE 0.986 17.000 0.719 NA   NA
 5870473 5870474 ECS88_2301 ECS88_2302   frmC FALSE 0.392 -72.000 0.000 NA   NA
 5870475 5870476 ECS88_2303 ECS88_2304 cirA lysP FALSE 0.010 292.000 0.000 1.000 N NA
 5870476 5870477 ECS88_2304 ECS88_2305 lysP   TRUE 0.743 -16.000 0.074 NA   NA
 5870477 5870478 ECS88_2305 ECS88_2306   yeiE FALSE 0.342 -87.000 0.000 NA   NA
 5870479 5870480 ECS88_2307 ECS88_2308 yeiH nfo FALSE 0.219 74.000 0.040 NA   NA
 5870480 5870481 ECS88_2308 ECS88_2309 nfo yeiI TRUE 0.657 4.000 0.004 NA N NA
 5870484 5870485 ECS88_2312 ECS88_2313 yeiM yeiN FALSE 0.125 94.000 0.000 NA N NA
 5870485 5870486 ECS88_2313 ECS88_2314 yeiN yeiC FALSE 0.320 -12.000 0.008 NA N NA
 5870486 5870487 ECS88_2314 ECS88_2315 yeiC fruA FALSE 0.052 342.000 0.000 NA Y NA
 5870487 5870488 ECS88_2315 ECS88_2316 fruA fruK TRUE 0.994 17.000 0.562 1.000 Y NA
 5870488 5870489 ECS88_2316 ECS88_2317 fruK fruB TRUE 0.993 0.000 0.112 1.000 Y NA
 5870492 5870493 ECS88_2320 ECS88_2321   yeiQ FALSE 0.019 223.000 0.000 1.000 N NA
 5870493 5870494 ECS88_2321 ECS88_2322 yeiQ yeiR FALSE 0.335 118.000 0.167 NA   NA
 5870494 5870495 ECS88_2322 ECS88_2323 yeiR yeiU TRUE 0.840 39.000 0.275 NA   NA
 5870495 5870496 ECS88_2323 ECS88_2324 yeiU spr FALSE 0.007 412.000 0.000 NA   NA
 5870496 5870497 ECS88_2324 ECS88_2325 spr rtn FALSE 0.126 181.000 0.219 NA N NA
 5870497 5870498 ECS88_2325 ECS88_2326 rtn yejA TRUE 0.611 82.000 0.394 NA N NA
 5870498 5870499 ECS88_2326 ECS88_2327 yejA yejB TRUE 0.998 1.000 0.848 0.046   NA
 5870499 5870500 ECS88_2327 ECS88_2328 yejB yejE TRUE 0.998 0.000 0.833 0.046   NA
 5870500 5870501 ECS88_2328 ECS88_2329 yejE yejF TRUE 0.996 2.000 0.758 1.000   NA
 5870502 5870503 ECS88_2330 ECS88_2331 yejG bcr FALSE 0.010 334.000 0.000 NA   NA
 5870503 5870504 ECS88_2331 ECS88_2332 bcr rsuA TRUE 0.485 28.000 0.036 1.000 N NA
 5870505 5870506 ECS88_2333 ECS88_2334 yejH rplY FALSE 0.213 125.000 0.024 0.015 N NA
 5870508 5870509 ECS88_2336 ECS88_2337 yejL yejM TRUE 0.745 20.000 0.040 NA   NA
 5870509 5870510 ECS88_2337 ECS88_tRNA25 yejM   FALSE 0.263 75.000 0.000 NA   NA
 5870513 5870514 ECS88_2341 ECS88_2342 ccmH ccmG TRUE 0.998 -3.000 0.578 1.000 Y NA
 5870514 5870515 ECS88_2342 ECS88_2343 ccmG ccmF TRUE 0.999 -3.000 0.804 0.002 Y NA
 5870515 5870516 ECS88_2343 ECS88_2344 ccmF ccmE TRUE 0.997 -3.000 0.211 0.002 Y NA
 5870516 5870517 ECS88_2344 ECS88_2345 ccmE ccmD TRUE 0.983 -3.000 0.344 1.000 N NA
 5870517 5870518 ECS88_2345 ECS88_2346 ccmD ccmC TRUE 0.990 -3.000 0.501 1.000 N NA
 5870518 5870519 ECS88_2346 ECS88_2347 ccmC ccmB TRUE 0.987 42.000 0.501 0.001 Y NA
 5870519 5870520 ECS88_2347 ECS88_2348 ccmB ccmA TRUE 0.999 -3.000 0.503 0.002 Y NA
 5870520 5870521 ECS88_2348 ECS88_2349 ccmA napC TRUE 0.777 13.000 0.043 1.000 N NA
 5870521 5870522 ECS88_2349 ECS88_2350 napC napB TRUE 0.998 10.000 0.490 0.003 Y NA
 5870522 5870523 ECS88_2350 ECS88_2351 napB napH TRUE 0.998 -3.000 0.316 0.008 Y NA
 5870523 5870524 ECS88_2351 ECS88_2352 napH napG TRUE 0.988 -13.000 0.795 0.041   NA
 5870524 5870525 ECS88_2352 ECS88_2353 napG napA TRUE 0.989 7.000 0.243 0.041   NA
 5870525 5870526 ECS88_2353 ECS88_2354 napA napD TRUE 0.995 -3.000 0.875 NA N NA
 5870526 5870527 ECS88_2354 ECS88_2355 napD napF TRUE 0.919 -10.000 0.209 NA   NA
 5870528 5870529 ECS88_2356 ECS88_2357   eco FALSE 0.095 135.000 0.034 NA   NA
 5870530 5870531 ECS88_2358 ECS88_2359 mqo yojI FALSE 0.037 218.000 0.000 1.000   NA
 5870531 5870532 ECS88_2359 ECS88_2360 yojI alkB FALSE 0.224 76.000 0.076 1.000 N NA
 5870532 5870533 ECS88_2360 ECS88_2361 alkB ada TRUE 0.962 0.000 0.015 0.012 N NA
 5870533 5870534 ECS88_2361 ECS88_2362 ada yojL FALSE 0.100 74.000 0.019 1.000 N NA
 5870534 5870535 ECS88_2362 ECS88_2364 yojL ompC FALSE 0.140 112.000 0.066 1.000 N NA
 5870536 5870537 ECS88_misc_RNA_44 ECS88_2365 micF rcsD FALSE 0.013 312.000 0.000 NA   NA
 5870537 5870538 ECS88_2365 ECS88_2366 rcsD rcsB TRUE 0.994 17.000 0.558 1.000 Y NA
 5870540 5870541 ECS88_2368 ECS88_2369 atoS atoC TRUE 0.998 -3.000 0.364 0.013 Y NA
 5870541 5870542 ECS88_2369 ECS88_2370 atoC atoD FALSE 0.133 196.000 0.273 1.000 N NA
 5870542 5870543 ECS88_2370 ECS88_2371 atoD atoA TRUE 1.000 0.000 0.800 0.000 Y NA
 5870543 5870544 ECS88_2371 ECS88_2372 atoA atoE TRUE 0.993 -3.000 0.174 1.000 Y NA
 5870544 5870545 ECS88_2372 ECS88_2373 atoE atoB TRUE 0.955 31.000 0.174 1.000 Y NA
 5870546 5870547 ECS88_2374 ECS88_2375 yfaP yfaQ TRUE 0.927 5.000 0.000 NA   NA
 5870547 5870548 ECS88_2375 ECS88_2376 yfaQ   TRUE 0.979 1.000 0.182 NA   NA
 5870548 5870549 ECS88_2376 ECS88_2377   yfaT FALSE 0.400 -81.000 0.074 NA   NA
 5870549 5870550 ECS88_2377 ECS88_2378 yfaT yfaA TRUE 0.928 -3.000 0.000 NA   NA
 5870550 5870551 ECS88_2378 ECS88_2379 yfaA gyrA FALSE 0.098 149.000 0.000 NA   NA
 5870554 5870555 ECS88_2382 ECS88_2383 nrdA nrdB TRUE 0.623 147.000 0.000 0.001 Y NA
 5870555 5870556 ECS88_2383 ECS88_2384 nrdB yfaE TRUE 0.882 0.000 0.034 1.000 N NA
 5870557 5870558 ECS88_2385 ECS88_2386 inaA glpQ FALSE 0.046 203.000 0.000 1.000   NA
 5870558 5870559 ECS88_2386 ECS88_2387 glpQ glpT TRUE 0.985 5.000 0.396 1.000 N NA
 5870560 5870561 ECS88_2388 ECS88_2389 glpA glpB TRUE 0.989 -10.000 0.650 0.001 N NA
 5870561 5870562 ECS88_2389 ECS88_2390 glpB glpC TRUE 0.996 -3.000 0.547 0.001 N NA
 5870562 5870563 ECS88_2390 ECS88_2391 glpC yfaD FALSE 0.047 193.000 0.000 NA   NA
 5870563 5870564 ECS88_2391 ECS88_2392 yfaD ypaA TRUE 0.876 13.000 0.000 NA   NA
 5870565 5870566 ECS88_2393 ECS88_2394 yfaU yfaV TRUE 0.814 18.000 0.000 NA   NA
 5870566 5870567 ECS88_2394 ECS88_2395 yfaV yfaV FALSE 0.088 154.000 0.000 NA   NA
 5870567 5870568 ECS88_2395 ECS88_2396 yfaV yfaW TRUE 0.814 18.000 0.000 NA   NA
 5870568 5870569 ECS88_2396 ECS88_2397 yfaW yfaX TRUE 0.938 3.000 0.090 1.000 N NA
 5870569 5870570 ECS88_2397 ECS88_2398 yfaX yfaY FALSE 0.036 220.000 0.000 1.000   NA
 5870570 5870571 ECS88_2398 ECS88_2399 yfaY yfaZ FALSE 0.149 100.000 0.005 1.000   NA
 5870574 5870575 ECS88_2402 ECS88_2403 yfbE yfbF TRUE 0.997 4.000 0.378 NA Y NA
 5870575 5870576 ECS88_2403 ECS88_2404 yfbF yfbG TRUE 0.995 0.000 0.220 NA Y NA
 5870576 5870577 ECS88_2404 ECS88_2405 yfbG yfbH TRUE 0.997 -3.000 0.447 1.000 Y NA
 5870577 5870578 ECS88_2405 ECS88_2407 yfbH arnT TRUE 0.874 0.000 0.031 1.000 N NA
 5870578 5870579 ECS88_2407 ECS88_2408 arnT yfbW TRUE 0.954 -3.000 0.091 1.000   NA
 5870579 5870580 ECS88_2408 ECS88_2409 yfbW yfbJ TRUE 0.752 -282.000 0.613 NA   NA
 5870581 5870582 ECS88_2410 ECS88_2411 pmrD menE FALSE 0.110 110.000 0.005 NA   NA
 5870582 5870583 ECS88_2411 ECS88_2412 menE menC TRUE 0.991 -3.000 0.283 0.001 N NA
 5870583 5870584 ECS88_2412 ECS88_2413 menC menB TRUE 0.998 0.000 0.171 0.001 Y NA
 5870584 5870585 ECS88_2413 ECS88_2414 menB yfbB TRUE 0.960 15.000 0.280 NA   NA
 5870585 5870586 ECS88_2414 ECS88_2415 yfbB menD TRUE 0.987 -3.000 0.355 NA   NA
 5870586 5870587 ECS88_2415 ECS88_2416 menD menF TRUE 0.833 89.000 0.281 1.000 Y NA
 5870587 5870588 ECS88_2416 ECS88_2417 menF elaB FALSE 0.216 79.000 0.043 NA   NA
 5870588 5870589 ECS88_2417 ECS88_2418 elaB elaA TRUE 0.422 55.000 0.077 NA   NA
 5870592 5870593 ECS88_2421 ECS88_2422 yfbL yfbM FALSE 0.205 103.000 0.000 NA   NA
 5870594 5870595 ECS88_2423 ECS88_2424 nuoN nuoM TRUE 0.763 187.000 0.437 0.001 Y NA
 5870595 5870596 ECS88_2424 ECS88_2425 nuoM nuoL TRUE 0.900 164.000 0.713 0.001 Y NA
 5870596 5870597 ECS88_2425 ECS88_2426 nuoL nuoK TRUE 0.997 -3.000 0.211 0.004 Y NA
 5870597 5870598 ECS88_2426 ECS88_2427 nuoK nuoJ TRUE 0.998 -3.000 0.269 0.002 Y NA
 5870598 5870599 ECS88_2427 ECS88_2428 nuoJ nuoI TRUE 0.998 12.000 0.428 0.004 Y NA
 5870599 5870600 ECS88_2428 ECS88_2429 nuoI nuoH TRUE 0.997 15.000 0.423 0.004 Y NA
 5870600 5870601 ECS88_2429 ECS88_2430 nuoH nuoG TRUE 0.999 -3.000 0.664 0.004 Y NA
 5870601 5870602 ECS88_2430 ECS88_2431 nuoG nuoF TRUE 0.951 47.000 0.180 0.004 Y NA
 5870602 5870603 ECS88_2431 ECS88_2432 nuoF nuoE TRUE 0.997 -3.000 0.186 0.004 Y NA
 5870603 5870604 ECS88_2432 ECS88_2433 nuoE nuoC TRUE 0.999 3.000 0.407 0.004 Y NA
 5870604 5870605 ECS88_2433 ECS88_2434 nuoC nuoB TRUE 0.964 94.000 0.691 0.002 Y NA
 5870605 5870606 ECS88_2434 ECS88_2435 nuoB nuoA TRUE 0.996 16.000 0.377 0.002 Y NA
 5870606 5870607 ECS88_2435 ECS88_2436 nuoA lrhA FALSE 0.003 629.000 0.000 1.000 N NA
 5870608 5870609 ECS88_2437 ECS88_2438 yfbQ yfbR FALSE 0.364 84.000 0.104 1.000   NA
 5870610 5870611 ECS88_2439 ECS88_2440 yfbS yfbT TRUE 0.618 87.000 0.308 1.000   NA
 5870611 5870612 ECS88_2440 ECS88_2441 yfbT yfbU TRUE 0.983 11.000 0.375 NA   NA
 5870612 5870613 ECS88_2441 ECS88_2442 yfbU yfbV TRUE 0.519 83.000 0.221 NA   NA
 5870614 5870615 ECS88_2443 ECS88_2444 ackA pta TRUE 0.826 75.000 0.634 1.000   NA
 5870615 5870616 ECS88_2444 ECS88_2445 pta yfcC FALSE 0.050 190.000 0.000 NA   NA
 5870617 5870618 ECS88_2446 ECS88_2447 yfcD yfcE TRUE 0.739 58.000 0.143 0.009   NA
 5870618 5870619 ECS88_2447 ECS88_2448 yfcE yfcF TRUE 0.478 53.000 0.092 NA   NA
 5870620 5870621 ECS88_2449 ECS88_2450 yfcG folX FALSE 0.138 57.000 0.012 1.000 N NA
 5870621 5870622 ECS88_2450 ECS88_2451 folX yfcH TRUE 0.876 21.000 0.122 1.000   NA
 5870623 5870624 ECS88_2452 ECS88_2453 yfcI hisP FALSE 0.044 196.000 0.000 NA   NA
 5870624 5870625 ECS88_2453 ECS88_2454 hisP hisM TRUE 0.998 8.000 0.643 1.000 Y NA
 5870625 5870626 ECS88_2454 ECS88_2455 hisM hisQ TRUE 0.999 -3.000 0.900 0.014 Y NA
 5870626 5870627 ECS88_2455 ECS88_2456 hisQ hisJ TRUE 0.965 90.000 0.833 0.046 Y NA
 5870627 5870628 ECS88_2456 ECS88_2457 hisJ argT FALSE 0.261 221.000 0.000 0.011 Y NA
 5870628 5870629 ECS88_2457 ECS88_2458 argT ubiX FALSE 0.013 266.000 0.000 1.000 N NA
 5870629 5870630 ECS88_2458 ECS88_2459 ubiX purF FALSE 0.144 95.000 0.056 1.000 N NA
 5870630 5870631 ECS88_2459 ECS88_2460 purF cvpA TRUE 0.861 37.000 0.262 1.000   NA
 5870631 5870632 ECS88_2460 ECS88_2461 cvpA dedD FALSE 0.009 532.000 0.116 NA   NA
 5870632 5870633 ECS88_2461 ECS88_2462 dedD folC TRUE 0.922 -10.000 0.216 NA   NA
 5870633 5870634 ECS88_2462 ECS88_2463 folC accD TRUE 0.667 70.000 0.383 1.000 N NA
 5870634 5870635 ECS88_2463 ECS88_2464 accD dedA FALSE 0.053 156.000 0.020 NA   NA
 5870635 5870636 ECS88_2464 ECS88_2466 dedA truA FALSE 0.197 83.000 0.038 NA   NA
 5870636 5870637 ECS88_2466 ECS88_2467 truA usg TRUE 0.894 0.000 0.040 1.000 N NA
 5870637 5870638 ECS88_2467 ECS88_2468 usg pdxB TRUE 0.863 66.000 0.097 0.008 Y NA
 5870640 5870641 ECS88_2470 ECS88_2471 yfcJ fabB FALSE 0.010 265.000 0.000 NA N NA
 5870643 5870644 ECS88_2473 ECS88_2474 yfcL yfcM TRUE 0.924 34.000 0.425 NA   NA
 5870644 5870645 ECS88_2474 ECS88_2475 yfcM yfcA TRUE 0.975 0.000 0.153 NA   NA
 5870645 5870646 ECS88_2475 ECS88_2476 yfcA mepA TRUE 0.979 0.000 0.160 1.000   NA
 5870646 5870647 ECS88_2476 ECS88_2477 mepA aroC TRUE 0.824 4.000 0.025 1.000 N NA
 5870647 5870648 ECS88_2477 ECS88_2478 aroC prmB TRUE 0.586 35.000 0.081 1.000 N NA
 5870650 5870651 ECS88_2480 ECS88_2481   yfcP TRUE 0.745 -13.000 0.000 NA   NA
 5870651 5870652 ECS88_2481 ECS88_2482 yfcP yfcQ TRUE 0.998 -3.000 0.286 0.007 Y NA
 5870652 5870653 ECS88_2482 ECS88_2483 yfcQ yfcR TRUE 0.999 -3.000 0.571 0.007 Y NA
 5870653 5870654 ECS88_2483 ECS88_2484 yfcR yfcS TRUE 0.950 -49.000 0.333 1.000 Y NA
 5870654 5870655 ECS88_2484 ECS88_2485 yfcS yfcU TRUE 0.964 -121.000 1.000 1.000 Y NA
 5870655 5870656 ECS88_2485 ECS88_2486 yfcU   TRUE 0.960 -132.000 1.000 1.000 Y NA
 5870656 5870657 ECS88_2486 ECS88_2487   sixA FALSE 0.003 566.000 0.000 1.000 N NA
 5870657 5870658 ECS88_2487 ECS88_2488 sixA yfcX FALSE 0.027 203.000 0.000 1.000 N NA
 5870658 5870659 ECS88_2488 ECS88_2489 yfcX yfcY TRUE 0.998 0.000 0.430 1.000 Y NA
 5870659 5870660 ECS88_2489 ECS88_2490 yfcY yfcZ FALSE 0.060 181.000 0.061 NA   NA
 5870662 5870663 ECS88_2492 ECS88_2493 vacJ   TRUE 0.708 26.000 0.000 NA   NA
 5870664 5870665 ECS88_2494 ECS88_tRNA26 yfdC   FALSE 0.260 76.000 0.000 NA   NA
 5870665 5870666 ECS88_tRNA26 ECS88_2495   intS FALSE 0.080 162.000 0.000 NA   NA
 5870667 5870668 ECS88_2496 ECS88_2497 neuO   FALSE 0.004 707.000 0.000 NA   NA
 5870668 5870669 ECS88_2497 ECS88_2498     FALSE 0.207 101.000 0.000 NA   NA
 5870670 5870671 ECS88_misc_RNA_45 ECS88_2500 sar   FALSE 0.008 393.000 0.000 NA   NA
 5870671 5870672 ECS88_2500 ECS88_2501     TRUE 0.955 0.000 0.000 1.000   NA
 5870673 5870674 ECS88_2503 ECS88_2504     TRUE 0.918 9.000 0.000 NA   NA
 5870676 5870677 ECS88_2506 ECS88_2507     TRUE 0.969 -3.000 0.167 NA   NA
 5870677 5870678 ECS88_2507 ECS88_2508     TRUE 0.980 11.000 0.333 NA   NA
 5870678 5870679 ECS88_2508 ECS88_2509     TRUE 0.994 3.000 0.600 NA   NA
 5870679 5870680 ECS88_2509 ECS88_2510     TRUE 0.996 0.000 0.750 NA   NA
 5870680 5870681 ECS88_2510 ECS88_2511     TRUE 0.649 -102.000 0.286 NA   NA
 5870681 5870682 ECS88_2511 ECS88_2512     TRUE 0.989 10.000 0.500 NA   NA
 5870682 5870683 ECS88_2512 ECS88_2513     TRUE 0.675 -19.000 0.000 NA   NA
 5870683 5870684 ECS88_2513 ECS88_2514     TRUE 0.941 3.000 0.065 NA   NA
 5870684 5870685 ECS88_2514 ECS88_2515     TRUE 0.810 19.000 0.065 NA   NA
 5870685 5870686 ECS88_2515 ECS88_2517     TRUE 0.480 91.000 0.214 NA   NA
 5870686 5870687 ECS88_2517 ECS88_2518     TRUE 0.981 2.000 0.214 NA   NA
 5870687 5870688 ECS88_2518 ECS88_2519     TRUE 0.939 -3.000 0.000 1.000   NA
 5870688 5870689 ECS88_2519 ECS88_2520     TRUE 0.938 3.000 0.000 NA   NA
 5870689 5870690 ECS88_2520 ECS88_2521     FALSE 0.027 228.000 0.000 NA   NA
 5870690 5870691 ECS88_2521 ECS88_2522     FALSE 0.124 137.000 0.000 NA   NA
 5870691 5870692 ECS88_2522 ECS88_2523     TRUE 0.761 -12.000 0.000 NA   NA
 5870692 5870693 ECS88_2523 ECS88_2524   r TRUE 0.939 -3.000 0.000 1.000   NA
 5870693 5870694 ECS88_2524 ECS88_2525 r   TRUE 0.879 -16.000 0.200 NA   NA
 5870694 5870695 ECS88_2525 ECS88_2526     FALSE 0.005 597.000 0.000 NA   NA
 5870695 5870696 ECS88_2526 ECS88_2527     TRUE 0.928 -3.000 0.000 NA   NA
 5870696 5870697 ECS88_2527 ECS88_2528   rusA TRUE 0.996 -3.000 1.000 NA   NA
 5870697 5870698 ECS88_2528 ECS88_2529 rusA   TRUE 0.994 -3.000 0.667 NA   NA
 5870698 5870699 ECS88_2529 ECS88_2530   roi TRUE 0.947 0.000 0.000 NA   NA
 5870699 5870700 ECS88_2530 ECS88_2531 roi ninF TRUE 0.840 -7.000 0.000 NA   NA
 5870700 5870701 ECS88_2531 ECS88_2532 ninF   TRUE 0.840 -7.000 0.000 NA   NA
 5870701 5870702 ECS88_2532 ECS88_2533     FALSE 0.132 134.000 0.000 NA   NA
 5870702 5870703 ECS88_2533 ECS88_2534     FALSE 0.041 200.000 0.000 NA   NA
 5870703 5870704 ECS88_2534 ECS88_2535     FALSE 0.178 116.000 0.000 NA   NA
 5870704 5870705 ECS88_2535 ECS88_2536     FALSE 0.363 57.000 0.000 NA   NA
 5870705 5870706 ECS88_2536 ECS88_2537     FALSE 0.249 -142.000 0.000 NA   NA
 5870706 5870707 ECS88_2537 ECS88_2538     TRUE 0.977 -3.000 0.000 0.006   NA
 5870707 5870708 ECS88_2538 ECS88_2539     FALSE 0.219 -208.000 0.000 NA   NA
 5870708 5870709 ECS88_2539 ECS88_2540     TRUE 0.587 -31.000 0.000 NA   NA
 5870711 5870712 ECS88_2541 ECS88_2542 cII cro TRUE 0.892 22.000 0.000 0.052   NA
 5870713 5870714 ECS88_2543 ECS88_2544 cII N FALSE 0.007 429.000 0.000 NA   NA
 5870714 5870715 ECS88_2544 ECS88_2545 N   TRUE 0.918 9.000 0.000 NA   NA
 5870715 5870716 ECS88_2545 ECS88_2546     FALSE 0.011 332.000 0.000 NA   NA
 5870716 5870717 ECS88_2546 ECS88_2547     FALSE 0.371 -79.000 0.000 NA   NA
 5870717 5870718 ECS88_2547 ECS88_2548   erf TRUE 0.675 -19.000 0.000 NA   NA
 5870718 5870719 ECS88_2548 ECS88_2549 erf   FALSE 0.259 -90.000 0.034 NA   NA
 5870719 5870720 ECS88_2549 ECS88_2550   abc TRUE 0.960 24.000 0.500 NA   NA
 5870720 5870721 ECS88_2550 ECS88_2551 abc   FALSE 0.258 77.000 0.000 NA   NA
 5870721 5870722 ECS88_2551 ECS88_2552     FALSE 0.307 65.000 0.000 NA   NA
 5870722 5870723 ECS88_2552 ECS88_2553     TRUE 0.943 2.000 0.000 NA   NA
 5870723 5870724 ECS88_2553 ECS88_2554     FALSE 0.172 118.000 0.000 NA   NA
 5870724 5870725 ECS88_2554 ECS88_2555     TRUE 0.840 -7.000 0.000 NA   NA
 5870725 5870726 ECS88_2555 ECS88_2556     FALSE 0.268 73.000 0.000 NA   NA
 5870726 5870727 ECS88_2556 ECS88_2557   torI FALSE 0.353 58.000 0.000 NA   NA
 5870729 5870730 ECS88_2559 ECS88_2560 dsdX dsdA TRUE 0.968 18.000 0.083 1.000 Y NA
 5870731 5870732 ECS88_2562 ECS88_2563 emrY emrK TRUE 0.998 0.000 1.000 1.000   NA
 5870733 5870734 ECS88_2564 ECS88_2565 evgA evgS TRUE 0.993 5.000 0.000 0.009 Y NA
 5870735 5870736 ECS88_2566 ECS88_2567 yfdE yfdV FALSE 0.299 74.000 0.000 1.000   NA
 5870736 5870737 ECS88_2567 ECS88_2568 yfdV oxc FALSE 0.313 70.000 0.000 1.000   NA
 5870737 5870738 ECS88_2568 ECS88_2569 oxc frc TRUE 0.480 54.000 0.134 1.000 N NA
 5870738 5870739 ECS88_2569 ECS88_2570 frc yfdX FALSE 0.005 512.000 0.000 NA   NA
 5870739 5870740 ECS88_2570 ECS88_2571 yfdX   FALSE 0.005 547.000 0.000 NA   NA
 5870740 5870741 ECS88_2571 ECS88_2572   yfdY TRUE 0.499 -45.000 0.000 NA   NA
 5870743 5870744 ECS88_misc_RNA_47 ECS88_2574 tpke70 yfdZ FALSE 0.007 428.000 0.000 NA   NA
 5870745 5870746 ECS88_2575 ECS88_2576 ypdA ypdB TRUE 0.998 15.000 0.744 0.012 Y NA
 5870746 5870747 ECS88_2576 ECS88_2577 ypdB ypdC TRUE 0.985 13.000 0.051 0.066 Y NA
 5870748 5870749 ECS88_2578 ECS88_2579 ypdD ypdE TRUE 0.990 25.000 0.571 1.000 Y NA
 5870749 5870750 ECS88_2579 ECS88_2580 ypdE ypdF TRUE 0.959 0.000 0.009 0.019 N NA
 5870750 5870751 ECS88_2580 ECS88_2581 ypdF ypdG TRUE 0.587 16.000 0.011 1.000 N NA
 5870751 5870752 ECS88_2581 ECS88_2582 ypdG ypdH TRUE 0.997 22.000 0.875 0.012 Y NA
 5870752 5870753 ECS88_2582 ECS88_2583 ypdH glk FALSE 0.190 219.000 0.091 1.000 Y NA
 5870754 5870755 ECS88_2584 ECS88_2585 yfeO ypeC FALSE 0.181 115.000 0.000 NA   NA
 5870758 5870759 ECS88_2588 ECS88_tRNA74 yfeA   FALSE 0.037 207.000 0.000 NA   NA
 5870759 5870760 ECS88_tRNA74 ECS88_tRNA73     TRUE 0.548 40.000 0.000 NA   NA
 5870761 5870762 ECS88_2590 ECS88_2591 yfeC yfeD TRUE 0.982 2.000 0.000 0.005   NA
 5870764 5870765 ECS88_tRNA27 ECS88_tRNA28     TRUE 0.482 45.000 0.000 NA   NA
 5870765 5870766 ECS88_tRNA28 ECS88_tRNA29     TRUE 0.457 47.000 0.000 NA   NA
 5870766 5870767 ECS88_tRNA29 ECS88_tRNA30     TRUE 0.927 5.000 0.000 NA   NA
 5870768 5870769 ECS88_2593 ECS88_2595 xapR xapB FALSE 0.046 252.000 0.130 1.000   NA
 5870769 5870770 ECS88_2595 ECS88_2596 xapB xapA TRUE 0.482 61.000 0.111 1.000   NA
 5870774 5870775 ECS88_2600 ECS88_2601   ligA FALSE 0.216 -91.000 0.017 NA   NA
 5870775 5870776 ECS88_2601 ECS88_2602 ligA zipA FALSE 0.085 71.000 0.002 1.000 N NA
 5870777 5870778 ECS88_2603 ECS88_2604 cysZ cysK FALSE 0.330 185.000 0.122 1.000 Y NA
 5870778 5870779 ECS88_2604 ECS88_2605 cysK ptsH FALSE 0.002 384.000 0.019 1.000 N NA
 5870779 5870780 ECS88_2605 ECS88_2606 ptsH ptsI TRUE 0.914 45.000 0.000 0.012 Y NA
 5870780 5870781 ECS88_2606 ECS88_2607 ptsI crr TRUE 0.929 41.000 0.000 0.012 Y NA
 5870784 5870785 ECS88_2610 ECS88_2611 cysM cysA FALSE 0.074 135.000 0.049 1.000 N NA
 5870785 5870786 ECS88_2611 ECS88_2612 cysA cysW TRUE 0.977 -10.000 0.180 1.000 Y NA
 5870786 5870787 ECS88_2612 ECS88_2613 cysW cysU TRUE 0.997 0.000 0.583 0.000 N NA
 5870787 5870788 ECS88_2613 ECS88_2614 cysU cysP TRUE 0.996 0.000 0.479 0.002 N NA
 5870788 5870789 ECS88_2614 ECS88_2615 cysP ucpA FALSE 0.044 158.000 0.043 1.000 N NA
 5870790 5870791 ECS88_2616 ECS88_2617 yfeU murP TRUE 0.973 4.000 0.158 1.000   NA
 5870792 5870793 ECS88_2619 ECS88_2620 yfeX yfeY TRUE 0.587 96.000 0.333 NA   NA
 5870793 5870794 ECS88_2620 ECS88_2621 yfeY yfeZ TRUE 0.598 61.000 0.204 NA   NA
 5870794 5870795 ECS88_2621 ECS88_2622 yfeZ ypeA TRUE 0.744 -13.000 0.059 NA   NA
 5870796 5870797 ECS88_2623 ECS88_2624 amiA hemF TRUE 0.825 4.000 0.025 1.000 N NA
 5870798 5870799 ECS88_2625 ECS88_2626 yfeG yffI TRUE 0.703 46.000 0.250 NA N NA
 5870799 5870800 ECS88_2626 ECS88_2627 yffI eutL TRUE 0.874 13.000 0.106 NA N NA
 5870800 5870801 ECS88_2627 ECS88_2628 eutL eutC TRUE 0.984 10.000 0.000 1.000 Y NA
 5870801 5870802 ECS88_2628 ECS88_2629 eutC eutB TRUE 0.981 21.000 0.000 0.000 Y NA
 5870802 5870803 ECS88_2629 ECS88_2630 eutB eutA TRUE 0.978 12.000 0.000 NA Y NA
 5870803 5870804 ECS88_2630 ECS88_2631 eutA eutH TRUE 0.997 -3.000 0.400 NA Y NA
 5870804 5870805 ECS88_2631 ECS88_2632 eutH eutG FALSE 0.081 217.000 0.222 1.000 N NA
 5870805 5870806 ECS88_2632 ECS88_2633 eutG eutJ TRUE 0.968 -10.000 0.556 1.000 N NA
 5870806 5870807 ECS88_2633 ECS88_2634 eutJ eutE TRUE 0.979 11.000 0.375 1.000 N NA
 5870807 5870808 ECS88_2634 ECS88_2635 eutE cchB TRUE 0.997 12.000 0.667 NA Y NA
 5870808 5870809 ECS88_2635 ECS88_2636 cchB eutM FALSE 0.141 130.000 0.000 NA   NA
 5870809 5870810 ECS88_2636 ECS88_2637 eutM eutI TRUE 0.928 -3.000 0.000 NA   NA
 5870810 5870811 ECS88_2637 ECS88_2638 eutI eutT TRUE 0.931 -3.000 0.095 1.000 N NA
 5870811 5870812 ECS88_2638 ECS88_2639 eutT eutQ TRUE 0.994 -3.000 0.214 NA Y NA
 5870812 5870813 ECS88_2639 ECS88_2640 eutQ eutP TRUE 0.943 -25.000 0.167 NA Y NA
 5870813 5870814 ECS88_2640 ECS88_2641 eutP ypfE TRUE 0.977 13.000 0.000 1.000 Y NA
 5870814 5870815 ECS88_2641 ECS88_2642 ypfE maeB FALSE 0.011 293.000 0.070 1.000 N NA
 5870816 5870817 ECS88_2643 ECS88_2644 talA tktB TRUE 0.995 20.000 0.739 1.000 Y NA
 5870818 5870819 ECS88_2645 ECS88_2646 ypfG yffH TRUE 0.489 126.000 0.333 NA   NA
 5870819 5870820 ECS88_2646 ECS88_2647 yffH aegA TRUE 0.431 68.000 0.167 1.000 N NA
 5870821 5870822 ECS88_2648 ECS88_2649 narQ acrD FALSE 0.196 164.000 0.133 0.071 N NA
 5870822 5870823 ECS88_2649 ECS88_2651 acrD yffB FALSE 0.003 539.000 0.000 1.000 N NA
 5870823 5870824 ECS88_2651 ECS88_2652 yffB dapE TRUE 0.980 4.000 0.292 1.000 N NA
 5870824 5870825 ECS88_2652 ECS88_2653 dapE ypfN TRUE 0.577 28.000 0.025 NA   NA
 5870826 5870827 ECS88_2654 ECS88_2655 ypfH ypfI FALSE 0.265 74.000 0.000 NA   NA
 5870827 5870828 ECS88_2655 ECS88_2656 ypfI ypfJ TRUE 0.793 15.000 0.029 NA   NA
 5870828 5870829 ECS88_2656 ECS88_2658 ypfJ purC FALSE 0.039 168.000 0.006 NA   NA
 5870829 5870830 ECS88_2658 ECS88_2659 purC nlpB FALSE 0.007 213.000 0.019 NA N NA
 5870830 5870831 ECS88_2659 ECS88_2660 nlpB dapA TRUE 0.986 17.000 0.267 NA Y NA
 5870832 5870833 ECS88_2661 ECS88_2662 gcvR bcp TRUE 0.952 0.000 0.102 1.000 N NA
 5870835 5870836 ECS88_2665 ECS88_2666 yfgC yfgD TRUE 0.938 21.000 0.259 1.000   NA
 5870837 5870838 ECS88_2667 ECS88_2668 hda uraA FALSE 0.226 50.000 0.048 NA N NA
 5870838 5870839 ECS88_2668 ECS88_2669 uraA upp TRUE 0.708 86.000 0.101 1.000 Y NA
 5870840 5870841 ECS88_2671 ECS88_2672 purM purN TRUE 0.998 0.000 0.230 0.001 Y NA
 5870841 5870842 ECS88_2672 ECS88_2673 purN ppk FALSE 0.021 172.000 0.017 1.000 N NA
 5870842 5870843 ECS88_2673 ECS88_2674 ppk ppx TRUE 0.997 5.000 0.486 1.000 Y NA
 5870844 5870845 ECS88_2675 ECS88_2676 yfgF   FALSE 0.032 217.000 0.000 NA   NA
 5870846 5870847 ECS88_2677 ECS88_2678 yfgH yfgI TRUE 0.955 16.000 0.273 NA   NA
 5870848 5870849 ECS88_2679 ECS88_2680 guaA guaB TRUE 0.918 69.000 0.190 0.000 Y NA
 5870851 5870852 ECS88_2682 ECS88_2683     FALSE 0.166 121.000 0.000 NA   NA
 5870852 5870853 ECS88_2683 ECS88_2684     FALSE 0.324 -91.000 0.000 NA   NA
 5870853 5870854 ECS88_2684 ECS88_2685     FALSE 0.378 55.000 0.000 NA   NA
 5870854 5870855 ECS88_2685 ECS88_2686     FALSE 0.061 179.000 0.000 NA   NA
 5870855 5870856 ECS88_2686 ECS88_2687   der FALSE 0.203 63.000 0.009 NA   NA
 5870856 5870857 ECS88_2687 ECS88_2688 der yfgL FALSE 0.409 118.000 0.203 1.000   NA
 5870857 5870858 ECS88_2688 ECS88_2689 yfgL yfgM TRUE 0.988 11.000 0.492 1.000   NA
 5870858 5870859 ECS88_2689 ECS88_2690 yfgM hisS TRUE 0.950 18.000 0.259 1.000   NA
 5870859 5870860 ECS88_2690 ECS88_misc_RNA_48 hisS   TRUE 0.791 20.000 0.000 NA   NA
 5870860 5870861 ECS88_misc_RNA_48 ECS88_2691   ispG TRUE 0.945 1.000 0.000 NA   NA
 5870861 5870862 ECS88_2691 ECS88_2692 ispG yfgA TRUE 0.901 27.000 0.233 1.000   NA
 5870862 5870863 ECS88_2692 ECS88_2693 yfgA yfgB FALSE 0.012 285.000 0.020 1.000   NA
 5870863 5870864 ECS88_2693 ECS88_2694 yfgB ndk FALSE 0.212 150.000 0.156 1.000   NA
 5870864 5870865 ECS88_2694 ECS88_2695 ndk pbpC FALSE 0.028 149.000 0.008 1.000 N NA
 5870865 5870866 ECS88_2695 ECS88_2696 pbpC yfhM TRUE 0.996 1.000 0.711 1.000   NA
 5870870 5870871 ECS88_2698 ECS88_2699 sseB pepB FALSE 0.327 142.000 0.253 NA   NA
 5870871 5870872 ECS88_2699 ECS88_2700 pepB yfhJ TRUE 0.598 59.000 0.171 1.000   NA
 5870872 5870873 ECS88_2700 ECS88_2701 yfhJ fdx TRUE 0.991 12.000 0.625 1.000   NA
 5870873 5870874 ECS88_2701 ECS88_2702 fdx hscA TRUE 0.995 2.000 0.794 1.000 N NA
 5870874 5870875 ECS88_2702 ECS88_2703 hscA hscB TRUE 0.995 17.000 0.634 1.000 Y NA
 5870875 5870876 ECS88_2703 ECS88_2704 hscB iscA TRUE 0.718 96.000 0.500 1.000   NA
 5870876 5870877 ECS88_2704 ECS88_2705 iscA iscU TRUE 0.985 17.000 0.359 0.002   NA
 5870877 5870878 ECS88_2705 ECS88_2706 iscU iscS TRUE 0.932 28.000 0.448 1.000 N NA
 5870878 5870879 ECS88_2706 ECS88_2707 iscS iscR TRUE 0.572 112.000 0.424 1.000 N NA
 5870879 5870880 ECS88_2707 ECS88_2708 iscR yfhQ FALSE 0.025 270.000 0.126 1.000 N NA
 5870881 5870882 ECS88_2709 ECS88_2710 suhB yfhR FALSE 0.120 118.000 0.003 1.000   NA
 5870882 5870883 ECS88_2710 ECS88_2711 yfhR csiE FALSE 0.058 191.000 0.000 1.000   NA
 5870886 5870887 ECS88_2714 ECS88_2715 yphB yphC TRUE 0.843 12.000 0.000 1.000 N NA
 5870887 5870888 ECS88_2715 ECS88_2716 yphC yphD FALSE 0.220 66.000 0.000 1.000 N NA
 5870888 5870889 ECS88_2716 ECS88_2717 yphD yphE TRUE 0.962 25.000 0.148 1.000 Y NA
 5870889 5870890 ECS88_2717 ECS88_2718 yphE yphF TRUE 0.966 23.000 0.161 NA Y NA
 5870890 5870891 ECS88_2718 ECS88_2719 yphF yphG FALSE 0.211 97.000 0.000 NA   NA
 5870895 5870896 ECS88_2724 ECS88_2725 glnB yfhA TRUE 0.445 61.000 0.146 1.000 N NA
 5870896 5870897 ECS88_2725 ECS88_2726 yfhA yfhG TRUE 0.711 -10.000 0.029 NA   NA
 5870897 5870898 ECS88_2726 ECS88_2728 yfhG yfhK FALSE 0.053 165.000 0.029 NA   NA
 5870902 5870903 ECS88_2731 ECS88_2732 tadA yfhB TRUE 0.580 25.000 0.062 NA N NA
 5870904 5870905 ECS88_2733 ECS88_2734 yfhH yfhL FALSE 0.356 56.000 0.056 NA   NA
 5870906 5870907 ECS88_misc_RNA_52 ECS88_2735 ryfB   FALSE 0.231 -183.000 0.000 NA   NA
 5870909 5870910 ECS88_2736 ECS88_2737 acpS pdxJ TRUE 0.987 0.000 0.326 1.000 N NA
 5870910 5870911 ECS88_2737 ECS88_2738 pdxJ recO TRUE 0.937 12.000 0.166 1.000 N NA
 5870911 5870912 ECS88_2738 ECS88_2739 recO era TRUE 0.937 12.000 0.109 1.000   NA
 5870912 5870913 ECS88_2739 ECS88_2740 era rnc TRUE 0.982 -3.000 0.127 0.038   NA
 5870913 5870914 ECS88_2740 ECS88_2742 rnc lepB FALSE 0.036 267.000 0.117 1.000   NA
 5870914 5870915 ECS88_2742 ECS88_2743 lepB lepA TRUE 0.941 16.000 0.187 1.000   NA
 5870915 5870916 ECS88_2743 ECS88_2744 lepA rseC FALSE 0.017 198.000 0.045 NA N NA
 5870916 5870917 ECS88_2744 ECS88_2745 rseC rseB TRUE 0.998 -3.000 0.609 NA Y NA
 5870917 5870918 ECS88_2745 ECS88_2746 rseB rseA TRUE 0.999 0.000 0.856 NA Y NA
 5870918 5870919 ECS88_2746 ECS88_2747 rseA rpoE TRUE 0.951 33.000 0.705 NA N NA
 5870927 5870928 ECS88_2755 ECS88_2756 yfiF   TRUE 0.786 -10.000 0.000 NA   NA
 5870929 5870930 ECS88_2757 ECS88_2758 trxC yfiP FALSE 0.342 69.000 0.084 NA   NA
 5870930 5870931 ECS88_2758 ECS88_2759 yfiP yfiQ TRUE 0.860 32.000 0.222 NA   NA
 5870931 5870932 ECS88_2759 ECS88_2760 yfiQ pssA FALSE 0.387 114.000 0.121 0.049 N NA
 5870932 5870933 ECS88_2760 ECS88_2761 pssA yfiM FALSE 0.270 97.000 0.089 NA   NA
 5870935 5870936 ECS88_2763 ECS88_2764     TRUE 0.995 12.000 0.400 1.000 Y NA
 5870937 5870938 ECS88_2765 ECS88_2766     FALSE 0.256 78.000 0.000 NA   NA
 5870938 5870939 ECS88_2766 ECS88_2767     FALSE 0.351 -84.000 0.000 NA   NA
 5870939 5870940 ECS88_2767 ECS88_2768     FALSE 0.023 244.000 0.000 NA   NA
 5870940 5870941 ECS88_2768 ECS88_2769     FALSE 0.202 105.000 0.000 NA   NA
 5870941 5870942 ECS88_2769 ECS88_2770     TRUE 0.499 -45.000 0.000 NA   NA
 5870942 5870943 ECS88_2770 ECS88_5S_3     FALSE 0.167 120.000 0.000 NA   NA
 5870943 5870944 ECS88_5S_3 ECS88_23S_2     FALSE 0.214 95.000 0.000 NA   NA
 5870944 5870945 ECS88_23S_2 ECS88_tRNA72     FALSE 0.046 194.000 0.000 NA   NA
 5870945 5870946 ECS88_tRNA72 ECS88_16S_2     FALSE 0.239 86.000 0.000 NA   NA
 5870946 5870947 ECS88_16S_2 ECS88_2780   clpB FALSE 0.006 442.000 0.000 NA   NA
 5870947 5870948 ECS88_2780 ECS88_misc_RNA_54 clpB ryfD TRUE 0.653 -22.000 0.000 NA   NA
 5870948 5870949 ECS88_misc_RNA_54 ECS88_2781 ryfD yfiH TRUE 0.921 8.000 0.000 NA   NA
 5870949 5870950 ECS88_2781 ECS88_2782 yfiH rluD TRUE 0.970 -3.000 0.168 NA   NA
 5870951 5870952 ECS88_2783 ECS88_2784 yfiO yfiA FALSE 0.009 270.000 0.004 NA   NA
 5870952 5870953 ECS88_2784 ECS88_5091 yfiA pheL FALSE 0.204 104.000 0.000 NA   NA
 5870953 5870954 ECS88_5091 ECS88_2785 pheL pheA FALSE 0.209 99.000 0.000 NA   NA
 5870955 5870956 ECS88_2786 ECS88_2787 tyrA aroF TRUE 0.982 11.000 0.000 1.000 Y NA
 5870957 5870958 ECS88_2788 ECS88_2789 yfiL yfiR FALSE 0.190 149.000 0.148 NA   NA
 5870958 5870959 ECS88_2789 ECS88_2790 yfiR yfiN TRUE 0.968 -10.000 0.475 NA   NA
 5870959 5870960 ECS88_2790 ECS88_2791 yfiN yfiB TRUE 0.972 16.000 0.475 1.000 N NA
 5870961 5870962 ECS88_2792 ECS88_2793 rplS trmD TRUE 0.975 42.000 0.567 1.000 Y NA
 5870962 5870963 ECS88_2793 ECS88_2794 trmD rimM TRUE 0.989 31.000 0.672 1.000 Y NA
 5870963 5870964 ECS88_2794 ECS88_2795 rimM rpsP TRUE 0.994 19.000 0.342 0.009 Y NA
 5870964 5870965 ECS88_2795 ECS88_2796 rpsP ffh FALSE 0.405 137.000 0.361 1.000 N NA
 5870966 5870967 ECS88_2797 ECS88_2798 ypjD yfjD TRUE 0.570 111.000 0.349 NA   NA
 5870969 5870970 ECS88_2801 ECS88_2802 yfjB recN FALSE 0.380 86.000 0.170 1.000 N NA
 5870970 5870971 ECS88_2802 ECS88_2803 recN smpA FALSE 0.056 149.000 0.049 1.000 N NA
 5870972 5870973 ECS88_2804 ECS88_2805 yfjF yfjG TRUE 0.869 -10.000 0.124 NA   NA
 5870974 5870975 ECS88_2806 ECS88_misc_RNA_55 smpB ssrA FALSE 0.036 208.000 0.000 NA   NA
 5870975 5870976 ECS88_misc_RNA_55 ECS88_2808 ssrA   FALSE 0.198 107.000 0.000 NA   NA
 5870977 5870978 ECS88_2809 ECS88_2810 D U TRUE 0.996 -3.000 1.000 NA   NA
 5870978 5870979 ECS88_2810 ECS88_2811 U   TRUE 0.986 -3.000 0.333 NA   NA
 5870979 5870980 ECS88_2811 ECS88_2812     TRUE 0.840 -7.000 0.000 NA   NA
 5870980 5870981 ECS88_2812 ECS88_2813     TRUE 0.852 15.000 0.000 NA   NA
 5870981 5870982 ECS88_2813 ECS88_2814   fII FALSE 0.378 55.000 0.000 NA   NA
 5870982 5870983 ECS88_2814 ECS88_2815 fII fI TRUE 0.913 10.000 0.000 NA   NA
 5870983 5870984 ECS88_2815 ECS88_2816 fI tfaE FALSE 0.128 135.000 0.000 NA   NA
 5870984 5870985 ECS88_2816 ECS88_2817 tfaE   TRUE 0.947 0.000 0.000 NA   NA
 5870985 5870986 ECS88_2817 ECS88_2818   I TRUE 0.928 -3.000 0.000 NA   NA
 5870986 5870987 ECS88_2818 ECS88_2819 I J TRUE 0.991 -7.000 1.000 NA   NA
 5870987 5870988 ECS88_2819 ECS88_2820 J W TRUE 0.475 -52.000 0.000 NA   NA
 5870988 5870989 ECS88_2820 ECS88_2821 W V TRUE 0.928 -3.000 0.000 NA   NA
 5870991 5870992 ECS88_2823 ECS88_2824   R TRUE 0.991 -7.000 1.000 NA   NA
 5870992 5870993 ECS88_2824 ECS88_2825 R   TRUE 0.943 -58.000 1.000 NA   NA
 5870993 5870994 ECS88_2825 ECS88_2826     TRUE 0.862 -157.000 1.000 NA   NA
 5870994 5870995 ECS88_2826 ECS88_2827     TRUE 0.996 -3.000 1.000 NA   NA
 5870995 5870996 ECS88_2827 ECS88_2828   R TRUE 0.898 -70.000 0.667 NA   NA
 5870996 5870997 ECS88_2828 ECS88_2829 R   TRUE 0.965 -19.000 0.667 NA   NA
 5870997 5870998 ECS88_2829 ECS88_2830   X TRUE 0.996 4.000 1.000 NA   NA
 5870998 5870999 ECS88_2830 ECS88_2831 X L TRUE 0.997 0.000 1.000 NA   NA
 5870999 5871000 ECS88_2831 ECS88_2832 L M TRUE 0.988 33.000 1.000 0.002   NA
 5871000 5871001 ECS88_2832 ECS88_2833 M N TRUE 0.942 4.000 0.000 1.000   NA
 5871001 5871002 ECS88_2833 ECS88_2834 N O TRUE 0.848 17.000 0.000 1.000   NA
 5871003 5871004 ECS88_2835 ECS88_2836 P   TRUE 0.996 -3.000 1.000 NA   NA
 5871005 5871006 ECS88_2837 ECS88_2838     FALSE 0.012 322.000 0.000 NA   NA
 5871006 5871007 ECS88_2838 ECS88_2839     TRUE 0.920 -61.000 0.750 NA   NA
 5871007 5871008 ECS88_2839 ECS88_2840     TRUE 0.855 52.000 0.500 NA   NA
 5871008 5871009 ECS88_2840 ECS88_2841     TRUE 0.928 -3.000 0.000 NA   NA
 5871009 5871010 ECS88_2841 ECS88_2842   dam TRUE 0.996 -3.000 1.000 NA   NA
 5871010 5871011 ECS88_2842 ECS88_2843 dam   FALSE 0.332 -63.000 0.000 1.000 N NA
 5871011 5871012 ECS88_2843 ECS88_2844     TRUE 0.997 0.000 1.000 NA   NA
 5871012 5871013 ECS88_2844 ECS88_2845     TRUE 0.762 62.000 0.400 NA   NA
 5871013 5871014 ECS88_2845 ECS88_2846     TRUE 0.951 23.000 0.400 NA   NA
 5871014 5871015 ECS88_2846 ECS88_2847   fil FALSE 0.264 -129.000 0.000 NA   NA
 5871015 5871016 ECS88_2847 ECS88_2848 fil cII TRUE 0.653 -22.000 0.000 NA   NA
 5871016 5871017 ECS88_2848 ECS88_2849 cII   TRUE 0.640 33.000 0.000 NA   NA
 5871018 5871019 ECS88_2850 ECS88_2851 cI int TRUE 0.993 3.000 0.400 0.051 N NA
 5871019 5871020 ECS88_2851 ECS88_2852 int   TRUE 0.972 5.000 0.182 NA   NA
 5871020 5871021 ECS88_2852 ECS88_2853     FALSE 0.005 547.000 0.000 NA   NA
 5871021 5871022 ECS88_2853 ECS88_2854     TRUE 0.928 -3.000 0.000 NA   NA
 5871023 5871024 ECS88_2855 ECS88_2856     FALSE 0.363 57.000 0.000 NA   NA
 5871024 5871025 ECS88_2856 ECS88_2857     TRUE 0.921 8.000 0.000 NA   NA
 5871026 5871027 ECS88_2859 ECS88_2860     FALSE 0.009 365.000 0.000 NA   NA
 5871029 5871030 ECS88_2862 ECS88_2863     TRUE 0.938 3.000 0.000 NA   NA
 5871031 5871032 ECS88_2864 ECS88_2865 tfaE   TRUE 0.947 0.000 0.000 NA   NA
 5871032 5871033 ECS88_2865 ECS88_2866   ymfQ TRUE 0.996 4.000 1.000 NA   NA
 5871033 5871034 ECS88_2866 ECS88_2867 ymfQ   TRUE 0.846 -9.000 0.083 NA   NA
 5871034 5871035 ECS88_2867 ECS88_2868     TRUE 0.791 -13.000 0.083 NA   NA
 5871035 5871036 ECS88_2868 ECS88_2869     TRUE 0.996 -3.000 1.000 NA   NA
 5871036 5871037 ECS88_2869 ECS88_2870     TRUE 0.948 0.000 0.062 NA   NA
 5871037 5871038 ECS88_2870 ECS88_2871     TRUE 0.980 -3.000 0.250 NA   NA
 5871038 5871039 ECS88_2871 ECS88_2872     TRUE 0.932 19.000 0.222 NA   NA
 5871039 5871040 ECS88_2872 ECS88_2874     FALSE 0.271 142.000 0.200 NA   NA
 5871040 5871041 ECS88_2874 ECS88_2875     TRUE 0.997 0.000 0.900 NA   NA
 5871041 5871042 ECS88_2875 ECS88_2876     TRUE 0.997 0.000 1.000 NA   NA
 5871042 5871043 ECS88_2876 ECS88_2877     TRUE 0.975 -16.000 0.800 NA   NA
 5871043 5871044 ECS88_2877 ECS88_2878     TRUE 0.987 9.000 0.417 NA   NA
 5871044 5871045 ECS88_2878 ECS88_2879     TRUE 0.991 -3.000 0.500 NA   NA
 5871045 5871046 ECS88_2879 ECS88_2880     TRUE 0.587 -25.000 0.047 NA   NA
 5871046 5871047 ECS88_2880 ECS88_2881     TRUE 0.927 -3.000 0.058 NA   NA
 5871047 5871048 ECS88_2881 ECS88_2882     TRUE 0.988 3.000 0.333 NA   NA
 5871048 5871049 ECS88_2882 ECS88_2883     TRUE 0.494 50.000 0.087 NA   NA
 5871049 5871050 ECS88_2883 ECS88_2884     TRUE 0.937 15.000 0.174 NA   NA
 5871050 5871051 ECS88_2884 ECS88_2885     TRUE 0.729 -58.000 0.222 NA   NA
 5871051 5871052 ECS88_2885 ECS88_2886   ymfR TRUE 0.995 0.000 0.600 NA   NA
 5871052 5871053 ECS88_2886 ECS88_2887 ymfR   TRUE 0.934 12.000 0.120 NA   NA
 5871053 5871054 ECS88_2887 ECS88_2888     TRUE 0.975 -3.000 0.200 NA   NA
 5871054 5871055 ECS88_2888 ECS88_2889     FALSE 0.250 117.000 0.105 NA   NA
 5871057 5871058 ECS88_2891 ECS88_2892   rz FALSE 0.275 71.000 0.000 NA   NA
 5871058 5871059 ECS88_2892 ECS88_2893 rz r TRUE 0.939 -3.000 0.000 1.000   NA
 5871059 5871060 ECS88_2893 ECS88_2894 r   TRUE 0.745 -13.000 0.000 NA   NA
 5871060 5871061 ECS88_2894 ECS88_2895     FALSE 0.393 53.000 0.000 NA   NA
 5871061 5871062 ECS88_2895 ECS88_2896   ydfT FALSE 0.053 186.000 0.000 NA   NA
 5871062 5871063 ECS88_2896 ECS88_2897 ydfT   TRUE 0.766 14.000 0.002 NA   NA
 5871063 5871064 ECS88_2897 ECS88_2898     TRUE 0.943 2.000 0.000 NA   NA
 5871064 5871065 ECS88_2898 ECS88_2899   rusA TRUE 0.791 20.000 0.000 NA   NA
 5871065 5871066 ECS88_2899 ECS88_2900 rusA   TRUE 0.939 -3.000 0.000 1.000   NA
 5871066 5871067 ECS88_2900 ECS88_2901   dam TRUE 0.939 -3.000 0.000 1.000   NA
 5871067 5871068 ECS88_2901 ECS88_2902 dam yfdN TRUE 0.570 -33.000 0.000 NA   NA
 5871068 5871069 ECS88_2902 ECS88_2903 yfdN   TRUE 0.928 -3.000 0.000 NA   NA
 5871069 5871070 ECS88_2903 ECS88_2905   ymfM TRUE 0.913 10.000 0.000 NA   NA
 5871070 5871071 ECS88_2905 ECS88_2906 ymfM ymfL TRUE 0.928 -3.000 0.000 NA   NA
 5871071 5871072 ECS88_2906 ECS88_2907 ymfL   TRUE 0.648 32.000 0.000 NA   NA
 5871074 5871075 ECS88_2909 ECS88_2910     TRUE 0.434 49.000 0.000 NA   NA
 5871076 5871077 ECS88_2911 ECS88_2912   yfdQ FALSE 0.299 66.000 0.000 NA   NA
 5871077 5871078 ECS88_2912 ECS88_2913 yfdQ yfdR FALSE 0.116 128.000 0.039 NA   NA
 5871078 5871079 ECS88_2913 ECS88_2915 yfdR   FALSE 0.242 85.000 0.000 NA   NA
 5871079 5871080 ECS88_2915 ECS88_2916     TRUE 0.938 3.000 0.000 NA   NA
 5871080 5871081 ECS88_2916 ECS88_2917     TRUE 0.923 -39.000 0.571 NA   NA
 5871082 5871083 ECS88_2918 ECS88_2919     TRUE 0.903 11.000 0.000 NA   NA
 5871083 5871084 ECS88_2919 ECS88_2920     TRUE 0.927 5.000 0.000 NA   NA
 5871085 5871086 ECS88_2921 ECS88_2923   ygaT FALSE 0.004 632.000 0.000 NA   NA
 5871086 5871087 ECS88_2923 ECS88_2924 ygaT ygaF TRUE 0.791 20.000 0.000 NA   NA
 5871087 5871088 ECS88_2924 ECS88_2925 ygaF gabD TRUE 0.778 23.000 0.000 1.000   NA
 5871088 5871089 ECS88_2925 ECS88_2926 gabD gabT TRUE 0.960 14.000 0.303 1.000 N NA
 5871089 5871090 ECS88_2926 ECS88_2927 gabT gabP FALSE 0.174 238.000 0.121 1.000 Y NA
 5871090 5871091 ECS88_2927 ECS88_2928 gabP csiR TRUE 0.972 21.000 0.625 1.000 N NA
 5871092 5871093 ECS88_2929 ECS88_2930 ygaU yqaE FALSE 0.205 84.000 0.027 1.000   NA
 5871094 5871095 ECS88_2931 ECS88_2932 ygaV ygaP TRUE 0.887 10.000 0.083 NA N NA
 5871101 5871102 ECS88_2938 ECS88_2939   nrdH FALSE 0.019 209.000 0.009 NA   NA
 5871102 5871103 ECS88_2939 ECS88_2940 nrdH nrdI TRUE 0.751 -3.000 0.026 NA N NA
 5871103 5871104 ECS88_2940 ECS88_2941 nrdI nrdE TRUE 0.898 -27.000 0.000 NA Y NA
 5871104 5871105 ECS88_2941 ECS88_2942 nrdE nrdF TRUE 0.993 10.000 0.000 0.001 Y NA
 5871105 5871106 ECS88_2942 ECS88_2943 nrdF proV FALSE 0.006 356.000 0.000 1.000 N NA
 5871106 5871107 ECS88_2943 ECS88_2944 proV proW TRUE 0.997 -7.000 0.630 0.083 Y NA
 5871107 5871108 ECS88_2944 ECS88_2945 proW proX TRUE 0.977 58.000 0.695 0.044 Y NA
 5871108 5871109 ECS88_2945 ECS88_2946 proX   FALSE 0.082 192.000 0.174 NA N NA
 5871109 5871110 ECS88_2946 ECS88_2947   ygaZ FALSE 0.089 124.000 0.060 NA N NA
 5871110 5871111 ECS88_2947 ECS88_2948 ygaZ ygaH TRUE 0.986 -10.000 0.915 NA   NA
 5871111 5871112 ECS88_2948 ECS88_2949 ygaH mprA FALSE 0.235 91.000 0.065 NA   NA
 5871112 5871113 ECS88_2949 ECS88_2950 mprA emrA FALSE 0.171 127.000 0.107 1.000 N NA
 5871113 5871114 ECS88_2950 ECS88_2951 emrA emrB TRUE 0.986 17.000 0.875 1.000 N NA
 5871114 5871115 ECS88_2951 ECS88_2952 emrB   FALSE 0.020 258.000 0.000 NA   NA
 5871115 5871116 ECS88_2952 ECS88_2953     TRUE 0.986 -3.000 0.344 NA   NA
 5871119 5871120 ECS88_2955 ECS88_2956 gshA yqaA FALSE 0.293 73.000 0.071 NA   NA
 5871120 5871121 ECS88_2956 ECS88_2957 yqaA yqaB TRUE 0.933 -3.000 0.067 NA   NA
 5871121 5871122 ECS88_2957 ECS88_tRNA71 yqaB   FALSE 0.017 281.000 0.000 NA   NA
 5871122 5871123 ECS88_tRNA71 ECS88_tRNA70     FALSE 0.314 64.000 0.000 NA   NA
 5871123 5871124 ECS88_tRNA70 ECS88_tRNA69     FALSE 0.314 64.000 0.000 NA   NA
 5871124 5871125 ECS88_tRNA69 ECS88_tRNA68     FALSE 0.307 65.000 0.000 NA   NA
 5871125 5871126 ECS88_tRNA68 ECS88_tRNA67     TRUE 0.932 4.000 0.000 NA   NA
 5871126 5871127 ECS88_tRNA67 ECS88_2959   csrA FALSE 0.012 316.000 0.000 NA   NA
 5871127 5871128 ECS88_2959 ECS88_2960 csrA alaS FALSE 0.008 235.000 0.020 1.000 N NA
 5871128 5871129 ECS88_2960 ECS88_2961 alaS recX FALSE 0.209 128.000 0.085 1.000   NA
 5871129 5871130 ECS88_2961 ECS88_2962 recX recA TRUE 0.665 69.000 0.296 1.000   NA
 5871130 5871131 ECS88_2962 ECS88_2963 recA ygaD FALSE 0.300 80.000 0.082 NA   NA
 5871131 5871132 ECS88_2963 ECS88_2964 ygaD mltB FALSE 0.072 145.000 0.026 NA   NA
 5871133 5871134 ECS88_2965 ECS88_2966 srlA srlE TRUE 0.998 -3.000 0.349 0.011 Y NA
 5871134 5871135 ECS88_2966 ECS88_2967 srlE srlB TRUE 0.991 11.000 0.000 0.011 Y NA
 5871135 5871136 ECS88_2967 ECS88_2968 srlB srlD TRUE 0.865 4.000 0.040 1.000 N NA
 5871136 5871137 ECS88_2968 ECS88_2969 srlD gutM FALSE 0.337 106.000 0.197 NA N NA
 5871137 5871138 ECS88_2969 ECS88_2970 gutM srlR TRUE 0.816 67.000 0.183 NA Y NA
 5871138 5871139 ECS88_2970 ECS88_2971 srlR gutQ TRUE 0.978 -7.000 0.562 1.000 N NA
 5871141 5871142 ECS88_2973 ECS88_2974 norV norW TRUE 0.928 -3.000 0.000 NA   NA
 5871142 5871143 ECS88_2974 ECS88_misc_RNA_57 norW C0664 FALSE 0.191 110.000 0.000 NA   NA
 5871144 5871145 ECS88_2975 ECS88_2976 hypF hydN FALSE 0.029 153.000 0.018 1.000 N NA
 5871145 5871146 ECS88_2976 ECS88_2977 hydN ascG FALSE 0.302 149.000 0.316 1.000 N NA
 5871147 5871148 ECS88_2978 ECS88_2979 ascF ascB TRUE 0.997 9.000 0.485 1.000 Y NA
 5871149 5871150 ECS88_2980 ECS88_2981     TRUE 0.708 26.000 0.000 NA   NA
 5871150 5871151 ECS88_2981 ECS88_2982   hycI TRUE 0.615 25.000 0.022 NA   NA
 5871151 5871152 ECS88_2982 ECS88_2983 hycI hycH TRUE 0.969 -7.000 0.360 NA   NA
 5871152 5871153 ECS88_2983 ECS88_2984 hycH hycG TRUE 0.967 -3.000 0.156 NA   NA
 5871153 5871154 ECS88_2984 ECS88_2985 hycG hycF TRUE 0.997 0.000 0.111 0.001 Y NA
 5871154 5871155 ECS88_2985 ECS88_2986 hycF hycE TRUE 0.997 10.000 0.200 0.001 Y NA
 5871155 5871156 ECS88_2986 ECS88_2987 hycE hycD TRUE 0.984 18.000 0.235 1.000 Y NA
 5871156 5871157 ECS88_2987 ECS88_2988 hycD hycC TRUE 0.997 3.000 0.382 1.000 Y NA
 5871157 5871158 ECS88_2988 ECS88_2989 hycC hycB TRUE 0.992 -3.000 0.154 1.000 Y NA
 5871158 5871159 ECS88_2989 ECS88_2990 hycB hycA FALSE 0.157 125.000 0.000 NA   NA
 5871160 5871161 ECS88_2991 ECS88_2992 hypA hypB TRUE 0.994 4.000 0.306 0.001   NA
 5871161 5871162 ECS88_2992 ECS88_2993 hypB hypC TRUE 0.973 -9.000 0.139 NA Y NA
 5871162 5871163 ECS88_2993 ECS88_2994 hypC hypD TRUE 0.987 0.000 0.021 NA Y NA
 5871163 5871164 ECS88_2994 ECS88_2995 hypD hypE TRUE 0.964 39.000 0.353 1.000 Y NA
 5871164 5871165 ECS88_2995 ECS88_2996 hypE fhlA FALSE 0.099 74.000 0.019 1.000 N NA
 5871165 5871166 ECS88_2996 ECS88_2997 fhlA   TRUE 0.984 6.000 0.231 0.075 N NA
 5871168 5871169 ECS88_3000 ECS88_3001 mutS pphB FALSE 0.228 106.000 0.000 1.000   NA
 5871171 5871172 ECS88_3003 ECS88_3004 ygbJ ygbK TRUE 0.928 -3.000 0.000 NA   NA
 5871172 5871173 ECS88_3004 ECS88_3005 ygbK ygbL TRUE 0.928 -3.000 0.000 NA   NA
 5871173 5871174 ECS88_3005 ECS88_3006 ygbL ygbM TRUE 0.995 5.000 0.265 1.000 Y NA
 5871174 5871175 ECS88_3006 ECS88_3007 ygbM ygbN TRUE 0.740 89.000 0.143 1.000 Y NA
 5871178 5871179 ECS88_3010 ECS88_3011 rpoS nlpD TRUE 0.422 63.000 0.142 1.000 N NA
 5871179 5871180 ECS88_3011 ECS88_3013 nlpD pcm FALSE 0.048 140.000 0.030 1.000 N NA
 5871180 5871181 ECS88_3013 ECS88_3014 pcm surE TRUE 0.976 -6.000 0.353 1.000   NA
 5871181 5871182 ECS88_3014 ECS88_3015 surE truD TRUE 0.892 -19.000 0.235 1.000   NA
 5871182 5871183 ECS88_3015 ECS88_3016 truD ispF TRUE 0.974 -3.000 0.173 1.000   NA
 5871183 5871184 ECS88_3016 ECS88_3017 ispF ispD TRUE 0.998 0.000 0.419 1.000 Y NA
 5871184 5871185 ECS88_3017 ECS88_3018 ispD ftsB TRUE 0.898 19.000 0.185 1.000 N NA
 5871185 5871186 ECS88_3018 ECS88_3020 ftsB ygbE FALSE 0.032 193.000 0.028 NA   NA
 5871186 5871187 ECS88_3020 ECS88_3021 ygbE cysC TRUE 0.681 50.000 0.198 NA   NA
 5871187 5871188 ECS88_3021 ECS88_3022 cysC cysN TRUE 0.997 0.000 0.340 1.000 Y NA
 5871188 5871189 ECS88_3022 ECS88_3023 cysN cysD TRUE 0.997 2.000 0.574 0.000 N NA
 5871191 5871192 ECS88_3025 ECS88_3026   cysH FALSE 0.023 265.000 0.000 1.000   NA
 5871192 5871193 ECS88_3026 ECS88_3027 cysH cysI FALSE 0.311 74.000 0.116 1.000 N NA
 5871193 5871194 ECS88_3027 ECS88_3028 cysI cysJ TRUE 1.000 0.000 0.791 0.000 Y NA
 5871195 5871196 ECS88_3029 ECS88_3031 ygcM ygcN FALSE 0.090 78.000 0.014 1.000 N NA
 5871196 5871197 ECS88_3031 ECS88_3032 ygcN ygcO TRUE 0.949 -9.000 0.026 NA Y NA
 5871197 5871198 ECS88_3032 ECS88_3033 ygcO ygcP TRUE 0.526 17.000 0.026 NA N NA
 5871199 5871200 ECS88_3034 ECS88_3035 ygcQ ygcR TRUE 0.989 -3.000 0.102 NA Y NA
 5871200 5871201 ECS88_3035 ECS88_3036 ygcR ygcS TRUE 0.799 -22.000 0.182 1.000 N NA
 5871201 5871202 ECS88_3036 ECS88_3037 ygcS ygcU TRUE 0.455 94.000 0.250 1.000 N NA
 5871202 5871203 ECS88_3037 ECS88_3038 ygcU ygcW TRUE 0.832 70.000 0.500 0.023 N NA
 5871204 5871205 ECS88_3039 ECS88_3040 yqcE ygcE TRUE 0.535 27.000 0.058 NA N NA
 5871207 5871208 ECS88_3042 ECS88_3043   ygcG TRUE 0.712 -16.000 0.000 NA   NA
 5871208 5871209 ECS88_3043 ECS88_3044 ygcG   TRUE 0.852 15.000 0.000 NA   NA
 5871209 5871210 ECS88_3044 ECS88_3046     TRUE 0.867 -6.000 0.000 NA   NA
 5871211 5871212 ECS88_3047 ECS88_3048 eno pyrG FALSE 0.185 88.000 0.068 1.000 N NA
 5871212 5871213 ECS88_3048 ECS88_3049 pyrG mazG FALSE 0.021 228.000 0.025 1.000   NA
 5871213 5871214 ECS88_3049 ECS88_3050 mazG chpA FALSE 0.306 72.000 0.000 1.000   NA
 5871214 5871215 ECS88_3050 ECS88_3051 chpA chpR TRUE 0.998 0.000 0.531 NA Y NA
 5871215 5871216 ECS88_3051 ECS88_3052 chpR relA TRUE 0.654 78.000 0.000 NA Y NA
 5871216 5871217 ECS88_3052 ECS88_3053 relA rumA TRUE 0.421 48.000 0.082 1.000 N NA
 5871219 5871220 ECS88_3055 ECS88_3056 gudD gudX TRUE 0.981 21.000 0.000 0.000 Y NA
 5871220 5871221 ECS88_3056 ECS88_3057 gudX gudP TRUE 0.916 2.000 0.000 1.000 N NA
 5871221 5871222 ECS88_3057 ECS88_3058 gudP yqcA FALSE 0.004 434.000 0.000 1.000 N NA
 5871222 5871223 ECS88_3058 ECS88_3059 yqcA truC TRUE 0.914 18.000 0.209 1.000 N NA
 5871223 5871224 ECS88_3059 ECS88_3060 truC yqcC TRUE 0.994 0.000 0.518 NA   NA
 5871224 5871225 ECS88_3060 ECS88_misc_RNA_58 yqcC csrB TRUE 0.434 49.000 0.000 NA   NA
 5871225 5871226 ECS88_misc_RNA_58 ECS88_3062 csrB syd FALSE 0.031 218.000 0.000 NA   NA
 5871227 5871228 ECS88_3063 ECS88_3064 queF ygdH FALSE 0.218 112.000 0.079 NA   NA
 5871228 5871229 ECS88_3064 ECS88_3065 ygdH sdaC FALSE 0.005 557.000 0.000 NA   NA
 5871229 5871230 ECS88_3065 ECS88_3066 sdaC sdaB TRUE 0.767 58.000 0.000 1.000 Y NA
 5871230 5871231 ECS88_3066 ECS88_3067 sdaB exo TRUE 0.679 22.000 0.000 1.000 N NA
 5871232 5871233 ECS88_3068 ECS88_3069 fucO fucA TRUE 0.651 25.000 0.066 1.000 N NA
 5871234 5871235 ECS88_3070 ECS88_3071 fucP fucI TRUE 0.927 33.000 0.104 NA Y NA
 5871235 5871236 ECS88_3071 ECS88_3072 fucI fucK TRUE 0.844 79.000 0.269 1.000 Y NA
 5871236 5871237 ECS88_3072 ECS88_3073 fucK fucU TRUE 0.995 2.000 0.211 1.000 Y NA
 5871237 5871238 ECS88_3073 ECS88_3074 fucU fucR TRUE 0.908 58.000 0.308 1.000 Y NA
 5871239 5871240 ECS88_3075 ECS88_3076 ygdE ygdD TRUE 0.917 -7.000 0.144 NA   NA
 5871240 5871241 ECS88_3076 ECS88_3077 ygdD gcvA TRUE 0.838 19.000 0.081 NA   NA
 5871244 5871245 ECS88_3079 ECS88_3080 csdA ygdK TRUE 0.990 0.000 0.122 0.001   NA
 5871246 5871247 ECS88_3081 ECS88_3082 ygdL mltA FALSE 0.085 77.000 0.009 1.000 N NA
 5871248 5871249 ECS88_tRNA31 ECS88_tRNA32     TRUE 0.629 34.000 0.000 NA   NA
 5871249 5871250 ECS88_tRNA32 ECS88_tRNA33     TRUE 0.629 34.000 0.000 NA   NA
 5871250 5871251 ECS88_tRNA33 ECS88_3083     FALSE 0.004 615.000 0.000 NA   NA
 5871251 5871252 ECS88_3083 ECS88_3084     TRUE 0.810 53.000 0.400 NA   NA
 5871252 5871253 ECS88_3084 ECS88_3085     TRUE 0.959 18.000 0.333 NA   NA
 5871253 5871254 ECS88_3085 ECS88_3086     TRUE 0.986 -3.000 0.333 NA   NA
 5871254 5871255 ECS88_3086 ECS88_3087     TRUE 0.989 13.000 0.667 NA   NA
 5871255 5871256 ECS88_3087 ECS88_3088     FALSE 0.353 58.000 0.000 NA   NA
 5871256 5871257 ECS88_3088 ECS88_3089     FALSE 0.048 192.000 0.000 NA   NA
 5871257 5871258 ECS88_3089 ECS88_3090     TRUE 0.890 12.000 0.000 NA   NA
 5871258 5871259 ECS88_3090 ECS88_3091     TRUE 0.605 -28.000 0.000 NA   NA
 5871259 5871260 ECS88_3091 ECS88_3092     TRUE 0.664 -21.000 0.000 NA   NA
 5871260 5871261 ECS88_3092 ECS88_3093     TRUE 0.628 -25.000 0.000 NA   NA
 5871261 5871262 ECS88_3093 ECS88_3094     TRUE 0.587 -31.000 0.000 NA   NA
 5871262 5871263 ECS88_3094 ECS88_3095     FALSE 0.008 389.000 0.000 NA   NA
 5871263 5871264 ECS88_3095 ECS88_3096     FALSE 0.289 -109.000 0.000 NA   NA
 5871264 5871265 ECS88_3096 ECS88_3097     TRUE 0.978 10.000 0.286 NA   NA
 5871265 5871266 ECS88_3097 ECS88_3098     TRUE 0.558 -34.000 0.000 NA   NA
 5871266 5871267 ECS88_3098 ECS88_3099     TRUE 0.947 0.000 0.000 NA   NA
 5871267 5871268 ECS88_3099 ECS88_3100     TRUE 0.761 -12.000 0.000 NA   NA
 5871268 5871269 ECS88_3100 ECS88_3102     FALSE 0.004 1070.000 0.000 NA   NA
 5871269 5871270 ECS88_3102 ECS88_3103     TRUE 0.929 -45.000 0.667 NA   NA
 5871270 5871271 ECS88_3103 ECS88_3104     TRUE 0.965 -19.000 0.667 NA   NA
 5871271 5871272 ECS88_3104 ECS88_3105     TRUE 0.994 4.000 0.667 NA   NA
 5871272 5871273 ECS88_3105 ECS88_3106     TRUE 0.996 0.000 0.667 NA   NA
 5871274 5871275 ECS88_3107 ECS88_3108     FALSE 0.238 63.000 0.000 1.000 N NA
 5871275 5871276 ECS88_3108 ECS88_3109     TRUE 0.912 3.000 0.062 1.000 N NA
 5871276 5871277 ECS88_3109 ECS88_3110     TRUE 0.924 0.000 0.062 1.000 N NA
 5871277 5871278 ECS88_3110 ECS88_3111     TRUE 0.685 32.000 0.000 1.000   NA
 5871278 5871279 ECS88_3111 ECS88_3112   amiC FALSE 0.048 201.000 0.000 1.000   NA
 5871281 5871282 ECS88_3114 ECS88_3115 recD recB TRUE 0.999 0.000 0.688 0.001 Y NA
 5871282 5871283 ECS88_3115 ECS88_3116 recB ptr TRUE 0.842 -7.000 0.092 1.000 N NA
 5871283 5871284 ECS88_3116 ECS88_3117 ptr recC FALSE 0.064 176.000 0.092 1.000 N NA
 5871284 5871285 ECS88_3117 ECS88_3118 recC ppdC TRUE 0.827 13.000 0.076 NA N NA
 5871285 5871286 ECS88_3118 ECS88_3119 ppdC ygdB TRUE 0.963 -15.000 0.538 NA   NA
 5871286 5871287 ECS88_3119 ECS88_3120 ygdB ppdB TRUE 0.987 -3.000 0.373 NA   NA
 5871287 5871288 ECS88_3120 ECS88_3121 ppdB ppdA TRUE 0.989 -9.000 0.368 NA Y NA
 5871288 5871289 ECS88_3121 ECS88_3122 ppdA thyA FALSE 0.010 185.000 0.016 NA N NA
 5871289 5871290 ECS88_3122 ECS88_3123 thyA lgt TRUE 0.956 7.000 0.164 1.000 N NA
 5871290 5871291 ECS88_3123 ECS88_3124 lgt ptsP FALSE 0.064 151.000 0.000 1.000 N NA
 5871291 5871292 ECS88_3124 ECS88_3125 ptsP nudH TRUE 0.650 13.000 0.008 1.000 N NA
 5871293 5871294 ECS88_3126 ECS88_3127 mutH ygdQ FALSE 0.185 69.000 0.052 1.000 N NA
 5871294 5871295 ECS88_3127 ECS88_3128 ygdQ ygdR TRUE 0.500 138.000 0.429 NA   NA
 5871295 5871296 ECS88_3128 ECS88_3129 ygdR tas FALSE 0.163 108.000 0.043 NA   NA
 5871297 5871298 ECS88_3130 ECS88_3131 ygeD aas TRUE 0.905 -7.000 0.124 NA   NA
 5871298 5871299 ECS88_3131 ECS88_misc_RNA_60 aas omrA FALSE 0.234 88.000 0.000 NA   NA
 5871299 5871300 ECS88_misc_RNA_60 ECS88_misc_RNA_61 omrA omrB FALSE 0.178 116.000 0.000 NA   NA
 5871304 5871305 ECS88_3137 ECS88_3138 ygeA araE FALSE 0.044 129.000 0.011 1.000 N NA
 5871305 5871306 ECS88_3138 ECS88_3139 araE kduD FALSE 0.008 315.000 0.000 1.000 N NA
 5871306 5871307 ECS88_3139 ECS88_3140 kduD kduI TRUE 0.869 30.000 0.269 1.000 N NA
 5871307 5871308 ECS88_3140 ECS88_3141 kduI yqeF FALSE 0.010 287.000 0.000 1.000 N NA
 5871310 5871311 ECS88_tRNA66 ECS88_3143   ygeR FALSE 0.254 79.000 0.000 NA   NA
 5871312 5871313 ECS88_3145 ECS88_3146 xdhA xdhB TRUE 0.998 11.000 0.500 0.000 Y NA
 5871313 5871314 ECS88_3146 ECS88_3147 xdhB xdhC TRUE 0.999 -3.000 0.667 0.038 Y NA
 5871316 5871317 ECS88_3149 ECS88_3150 ygeW ygeX TRUE 0.896 58.000 0.265 1.000 Y NA
 5871317 5871318 ECS88_3150 ECS88_3151 ygeX ygeY TRUE 0.867 58.000 0.188 1.000 Y NA
 5871318 5871319 ECS88_3151 ECS88_3152 ygeY hyuA FALSE 0.263 53.000 0.050 1.000 N NA
 5871319 5871320 ECS88_3152 ECS88_3153 hyuA yqeA FALSE 0.241 48.000 0.031 1.000 N NA
 5871321 5871322 ECS88_3154 ECS88_3155 yqeB yqeC TRUE 0.585 48.000 0.119 NA   NA
 5871323 5871324 ECS88_3156 ECS88_3157 ygfJ ygfK FALSE 0.012 322.000 0.000 NA   NA
 5871324 5871325 ECS88_3157 ECS88_3158 ygfK ssnA TRUE 0.990 3.000 0.443 1.000 N NA
 5871325 5871326 ECS88_3158 ECS88_3159 ssnA ygfM FALSE 0.335 51.000 0.066 1.000 N NA
 5871326 5871327 ECS88_3159 ECS88_3160 ygfM xdhD TRUE 0.999 -3.000 0.800 0.023 Y NA
 5871327 5871328 ECS88_3160 ECS88_3161 xdhD ygfO FALSE 0.052 165.000 0.000 1.000 N NA
 5871328 5871329 ECS88_3161 ECS88_3162 ygfO guaD TRUE 0.972 15.000 0.000 1.000 Y NA
 5871329 5871330 ECS88_3162 ECS88_3163 guaD ygfQ TRUE 0.642 36.000 0.000 1.000   NA
 5871331 5871332 ECS88_3164 ECS88_3165 ygfS ygfT TRUE 0.994 0.000 0.333 0.010 N NA
 5871333 5871334 ECS88_3166 ECS88_3167   ygfU TRUE 0.460 -55.000 0.000 NA   NA
 5871334 5871335 ECS88_3167 ECS88_3169 ygfU idi FALSE 0.015 250.000 0.000 1.000 N NA
 5871336 5871337 ECS88_3170 ECS88_3171 lysS prfB TRUE 0.995 10.000 0.162 0.035 Y NA
 5871337 5871338 ECS88_3171 ECS88_3172 prfB recJ FALSE 0.096 91.000 0.028 1.000 N NA
 5871338 5871339 ECS88_3172 ECS88_3173 recJ dsbC TRUE 0.917 6.000 0.082 1.000 N NA
 5871339 5871340 ECS88_3173 ECS88_3174 dsbC xerD TRUE 0.691 25.000 0.079 1.000 N NA
 5871342 5871343 ECS88_3176 ECS88_3177 ygfX ygfY TRUE 0.678 -19.000 0.061 NA   NA
 5871345 5871346 ECS88_3179 ECS88_3180 yqfA yqfB FALSE 0.124 164.000 0.113 NA   NA
 5871348 5871349 ECS88_3182 ECS88_3183 gcvP gcvH TRUE 0.755 118.000 0.249 1.000 Y NA
 5871349 5871350 ECS88_3183 ECS88_3184 gcvH gcvT TRUE 0.991 24.000 0.317 0.001 Y NA
 5871350 5871351 ECS88_3184 ECS88_3186 gcvT visC FALSE 0.002 448.000 0.004 1.000 N NA
 5871351 5871352 ECS88_3186 ECS88_3187 visC ubiH TRUE 0.995 23.000 0.474 0.001 Y NA
 5871352 5871353 ECS88_3187 ECS88_3188 ubiH pepP TRUE 0.821 -3.000 0.026 1.000 N NA
 5871353 5871354 ECS88_3188 ECS88_3189 pepP ygfB TRUE 0.641 26.000 0.036 NA   NA
 5871355 5871356 ECS88_3190 ECS88_misc_RNA_62 zapA ssrS TRUE 0.522 42.000 0.000 NA   NA
 5871356 5871357 ECS88_misc_RNA_62 ECS88_3191 ssrS ygfA FALSE 0.260 76.000 0.000 NA   NA
 5871357 5871358 ECS88_3191 ECS88_misc_RNA_64 ygfA rygC TRUE 0.697 27.000 0.000 NA   NA
 5871358 5871359 ECS88_misc_RNA_64 ECS88_misc_RNA_63 rygC rygD FALSE 0.243 -148.000 0.000 NA   NA
 5871360 5871361 ECS88_3192 ECS88_3193 serA rpiA FALSE 0.008 256.000 0.029 1.000 N NA
 5871361 5871362 ECS88_3193 ECS88_3194 rpiA yqfE FALSE 0.369 56.000 0.000 NA   NA
 5871363 5871364 ECS88_3195 ECS88_3196 argP yliK FALSE 0.058 182.000 0.000 NA   NA
 5871365 5871366 ECS88_3197 ECS88_3198 ygfI yggE FALSE 0.063 158.000 0.037 NA   NA
 5871366 5871367 ECS88_3198 ECS88_3199 yggE argO FALSE 0.249 93.000 0.075 NA   NA
 5871367 5871368 ECS88_3199 ECS88_3200 argO mscS FALSE 0.123 139.000 0.049 1.000   NA
 5871368 5871369 ECS88_3200 ECS88_3201 mscS fbaA FALSE 0.023 191.000 0.038 1.000 N NA
 5871369 5871370 ECS88_3201 ECS88_3202 fbaA pgk FALSE 0.289 215.000 0.056 0.006 Y NA
 5871370 5871371 ECS88_3202 ECS88_3203 pgk epd TRUE 0.905 50.000 0.070 0.006 Y NA
 5871372 5871373 ECS88_3204 ECS88_3205     TRUE 0.820 23.000 0.103 NA   NA
 5871373 5871374 ECS88_3205 ECS88_3206     TRUE 0.995 1.000 0.605 NA   NA
 5871374 5871375 ECS88_3206 ECS88_3207     TRUE 0.938 -18.000 0.093 NA Y NA
 5871375 5871376 ECS88_3207 ECS88_3208     TRUE 0.964 -39.000 0.214 0.013 Y NA
 5871377 5871378 ECS88_3209 ECS88_3210 yggC yggD TRUE 0.991 -3.000 0.588 NA N NA
 5871378 5871379 ECS88_3210 ECS88_3211 yggD yggF TRUE 0.762 22.000 0.000 NA   NA
 5871379 5871380 ECS88_3211 ECS88_3212 yggF yggF TRUE 0.475 -52.000 0.000 NA   NA
 5871380 5871381 ECS88_3212 ECS88_3213 yggF yggP TRUE 0.928 -3.000 0.000 NA   NA
 5871381 5871382 ECS88_3213 ECS88_3214 yggP cmtA TRUE 0.974 15.000 0.458 1.000 N NA
 5871382 5871383 ECS88_3214 ECS88_3215 cmtA cmtB TRUE 0.983 28.000 0.250 0.011 Y NA
 5871387 5871388 ECS88_3219 ECS88_3220 speB   FALSE 0.126 136.000 0.000 NA   NA
 5871388 5871389 ECS88_3220 ECS88_3221   speA FALSE 0.106 146.000 0.000 NA   NA
 5871389 5871390 ECS88_3221 ECS88_3222 speA yqgB TRUE 0.918 9.000 0.000 NA   NA
 5871391 5871392 ECS88_3223 ECS88_3224 yqgC metK FALSE 0.013 304.000 0.000 NA   NA
 5871392 5871393 ECS88_3224 ECS88_3225 metK galP FALSE 0.004 437.000 0.000 1.000 N NA
 5871393 5871394 ECS88_3225 ECS88_3226 galP sprT FALSE 0.217 77.000 0.042 NA   NA
 5871394 5871395 ECS88_3226 ECS88_3227 sprT endA TRUE 0.456 95.000 0.210 NA   NA
 5871395 5871396 ECS88_3227 ECS88_3228 endA yggJ TRUE 0.501 80.000 0.201 NA   NA
 5871396 5871397 ECS88_3228 ECS88_3229 yggJ gshB TRUE 0.948 13.000 0.173 NA   NA
 5871397 5871398 ECS88_3229 ECS88_3230 gshB yqgE FALSE 0.210 109.000 0.120 NA N NA
 5871398 5871399 ECS88_3230 ECS88_3231 yqgE yqgF TRUE 0.981 0.000 0.263 NA N NA
 5871401 5871402 ECS88_3233 ECS88_3234 yggS yggT TRUE 0.926 18.000 0.189 NA   NA
 5871402 5871403 ECS88_3234 ECS88_3235 yggT yggU TRUE 0.943 -3.000 0.081 NA   NA
 5871403 5871404 ECS88_3235 ECS88_3236 yggU yggV TRUE 0.868 8.000 0.016 NA   NA
 5871404 5871405 ECS88_3236 ECS88_3237 yggV yggW TRUE 0.931 -7.000 0.218 1.000 N NA
 5871406 5871407 ECS88_3238 ECS88_3239 yggM ansB FALSE 0.109 117.000 0.018 NA   NA
 5871407 5871408 ECS88_3239 ECS88_3240 ansB yggN FALSE 0.042 176.000 0.027 NA   NA
 5871408 5871409 ECS88_3240 ECS88_3241 yggN yggL FALSE 0.117 184.000 0.155 NA   NA
 5871409 5871410 ECS88_3241 ECS88_3242 yggL yggH TRUE 0.962 0.000 0.092 NA   NA
 5871411 5871412 ECS88_3244 ECS88_3245 mutY yggX TRUE 0.759 28.000 0.150 NA N NA
 5871412 5871413 ECS88_3245 ECS88_3246 yggX mltC FALSE 0.347 65.000 0.128 NA N NA
 5871413 5871414 ECS88_3246 ECS88_3247 mltC nupG FALSE 0.038 202.000 0.056 NA   NA
 5871416 5871417 ECS88_3249 ECS88_tRNA34 yqgA   FALSE 0.201 106.000 0.000 NA   NA
 5871417 5871418 ECS88_tRNA34 ECS88_3250   int FALSE 0.043 198.000 0.000 NA   NA
 5871418 5871419 ECS88_3250 ECS88_3251 int   FALSE 0.037 440.000 0.000 1.000 Y NA
 5871421 5871422 ECS88_3253 ECS88_3254     TRUE 0.995 12.000 0.400 1.000 Y NA
 5871423 5871424 ECS88_3255 ECS88_3256   tia FALSE 0.064 175.000 0.000 NA   NA
 5871424 5871425 ECS88_3256 ECS88_3257 tia papG FALSE 0.011 351.000 0.000 1.000   NA
 5871425 5871426 ECS88_3257 ECS88_3258 papG papF TRUE 0.753 44.000 0.000 0.009   NA
 5871426 5871427 ECS88_3258 ECS88_3259 papF papE TRUE 0.919 45.000 0.000 0.007 Y NA
 5871427 5871428 ECS88_3259 ECS88_3260 papE papK TRUE 0.993 9.000 0.000 0.007 Y NA
 5871428 5871429 ECS88_3260 ECS88_3261 papK papJ TRUE 0.923 7.000 0.000 NA   NA
 5871429 5871430 ECS88_3261 ECS88_3262 papJ papD TRUE 0.586 37.000 0.000 NA   NA
 5871430 5871431 ECS88_3262 ECS88_3263 papD papC TRUE 0.951 71.000 0.750 1.000 Y NA
 5871431 5871432 ECS88_3263 ECS88_3264 papC papH TRUE 0.983 38.000 0.667 1.000 Y NA
 5871432 5871433 ECS88_3264 ECS88_3265 papH papA TRUE 0.852 63.000 0.000 0.007 Y NA
 5871433 5871434 ECS88_3265 ECS88_3266 papA papB FALSE 0.077 174.000 0.000 1.000   NA
 5871436 5871437 ECS88_3268 ECS88_3269     FALSE 0.285 -115.000 0.000 NA   NA
 5871437 5871438 ECS88_3269 ECS88_3270     FALSE 0.283 69.000 0.000 NA   NA
 5871438 5871439 ECS88_3270 ECS88_3271     FALSE 0.027 228.000 0.000 NA   NA
 5871440 5871441 ECS88_3272 ECS88_3273     TRUE 0.586 37.000 0.000 NA   NA
 5871441 5871442 ECS88_3273 ECS88_3274     FALSE 0.415 -67.000 0.000 NA   NA
 5871442 5871443 ECS88_3274 ECS88_3275   insD TRUE 0.521 -42.000 0.000 NA   NA
 5871443 5871444 ECS88_3275 ECS88_3276 insD insD TRUE 0.928 -3.000 0.000 NA   NA
 5871446 5871447 ECS88_3278 ECS88_3279 pgtC pgtB TRUE 0.995 -3.000 0.909 1.000 N NA
 5871447 5871448 ECS88_3279 ECS88_3280 pgtB pgtA TRUE 0.990 -19.000 0.500 0.074 Y NA
 5871448 5871449 ECS88_3280 ECS88_3281 pgtA   FALSE 0.036 209.000 0.000 NA   NA
 5871449 5871450 ECS88_3281 ECS88_3282     FALSE 0.363 57.000 0.000 NA   NA
 5871451 5871452 ECS88_3283 ECS88_3284     FALSE 0.307 65.000 0.000 NA   NA
 5871452 5871453 ECS88_3284 ECS88_3285     TRUE 0.777 21.000 0.000 NA   NA
 5871453 5871454 ECS88_3285 ECS88_3286   ibrB TRUE 0.548 40.000 0.000 NA   NA
 5871454 5871455 ECS88_3286 ECS88_3287 ibrB ibrB FALSE 0.384 -73.000 0.000 NA   NA
 5871455 5871456 ECS88_3287 ECS88_3288 ibrB ibrA TRUE 0.729 -15.000 0.000 NA   NA
 5871456 5871457 ECS88_3288 ECS88_3289 ibrA   FALSE 0.126 136.000 0.000 NA   NA
 5871457 5871458 ECS88_3289 ECS88_3290     FALSE 0.054 185.000 0.000 NA   NA
 5871458 5871459 ECS88_3290 ECS88_3291     FALSE 0.082 159.000 0.000 NA   NA
 5871459 5871460 ECS88_3291 ECS88_3292     TRUE 0.979 0.000 0.000 0.048   NA
 5871461 5871462 ECS88_3293 ECS88_3294     FALSE 0.108 145.000 0.000 NA   NA
 5871463 5871464 ECS88_3295 ECS88_3296 ireA   FALSE 0.006 476.000 0.000 NA   NA
 5871464 5871465 ECS88_3296 ECS88_3297     FALSE 0.234 88.000 0.000 NA   NA
 5871472 5871473 ECS88_3304 ECS88_3305   yfjR FALSE 0.040 203.000 0.000 NA   NA
 5871473 5871474 ECS88_3305 ECS88_3307 yfjR   TRUE 0.506 43.000 0.000 NA   NA
 5871474 5871475 ECS88_3307 ECS88_3308     TRUE 0.925 6.000 0.000 NA   NA
 5871475 5871476 ECS88_3308 ECS88_3309     FALSE 0.228 90.000 0.000 NA   NA
 5871476 5871477 ECS88_3309 ECS88_3311     FALSE 0.225 91.000 0.000 NA   NA
 5871477 5871478 ECS88_3311 ECS88_3312   yeeS TRUE 0.482 45.000 0.000 NA   NA
 5871478 5871479 ECS88_3312 ECS88_3313 yeeS yeeT FALSE 0.283 69.000 0.000 NA   NA
 5871479 5871480 ECS88_3313 ECS88_3314 yeeT yeeU FALSE 0.254 79.000 0.000 NA   NA
 5871480 5871481 ECS88_3314 ECS88_3315 yeeU yeeV FALSE 0.415 -67.000 0.000 NA   NA
 5871481 5871482 ECS88_3315 ECS88_3316 yeeV yeeW TRUE 0.928 -3.000 0.000 NA   NA
 5871482 5871483 ECS88_3316 ECS88_3317 yeeW   TRUE 0.570 -33.000 0.000 NA   NA
 5871483 5871484 ECS88_3317 ECS88_3318     FALSE 0.242 85.000 0.000 NA   NA
 5871484 5871485 ECS88_3318 ECS88_3319     FALSE 0.275 71.000 0.000 NA   NA
 5871485 5871486 ECS88_3319 ECS88_3320     FALSE 0.007 412.000 0.000 NA   NA
 5871486 5871487 ECS88_3320 ECS88_3321   kpsF FALSE 0.004 774.000 0.000 NA   NA
 5871487 5871488 ECS88_3321 ECS88_3322 kpsF kpsE TRUE 0.692 72.000 0.000 1.000 Y NA
 5871488 5871489 ECS88_3322 ECS88_3323 kpsE kpsD TRUE 0.955 21.000 0.000 1.000 Y NA
 5871489 5871490 ECS88_3323 ECS88_3324 kpsD kpsU TRUE 0.984 10.000 0.000 1.000 Y NA
 5871490 5871491 ECS88_3324 ECS88_3325 kpsU kpsC TRUE 0.983 -3.000 0.005 1.000 Y NA
 5871491 5871492 ECS88_3325 ECS88_3326 kpsC kpsS TRUE 0.985 35.000 0.315 0.001 Y NA
 5871493 5871494 ECS88_3327 ECS88_3328 neuE neuC FALSE 0.315 -94.000 0.000 NA   NA
 5871494 5871495 ECS88_3328 ECS88_3329 neuC neuA TRUE 0.995 -3.000 0.111 0.004 Y NA
 5871495 5871496 ECS88_3329 ECS88_3330 neuA neuB TRUE 0.993 0.000 0.105 1.000 Y NA
 5871496 5871497 ECS88_3330 ECS88_3331 neuB neuD TRUE 0.921 -3.000 0.036 1.000   NA
 5871497 5871498 ECS88_3331 ECS88_3332 neuD kpsT TRUE 0.642 50.000 0.000 0.073   NA
 5871498 5871499 ECS88_3332 ECS88_3333 kpsT kpsM TRUE 0.992 -3.000 0.056 0.073 Y NA
 5871499 5871500 ECS88_3333 ECS88_3335 kpsM yghD FALSE 0.002 998.000 0.000 1.000 N NA
 5871500 5871501 ECS88_3335 ECS88_3336 yghD yghE TRUE 0.999 2.000 0.811 1.000 Y NA
 5871501 5871502 ECS88_3336 ECS88_3337 yghE   TRUE 0.999 -3.000 0.537 0.066 Y NA
 5871502 5871503 ECS88_3337 ECS88_3338     TRUE 0.997 -3.000 0.461 1.000 Y NA
 5871503 5871504 ECS88_3338 ECS88_3339     TRUE 0.997 -3.000 0.569 0.004   NA
 5871504 5871505 ECS88_3339 ECS88_3340     TRUE 0.997 -3.000 0.605 0.004   NA
 5871505 5871506 ECS88_3340 ECS88_3341     TRUE 0.995 4.000 0.425 0.004   NA
 5871506 5871507 ECS88_3341 ECS88_3342   epsF TRUE 0.996 -10.000 0.599 0.004 Y NA
 5871507 5871508 ECS88_3342 ECS88_3343 epsF epsE TRUE 0.999 0.000 0.653 0.004 Y NA
 5871508 5871509 ECS88_3343 ECS88_3344 epsE epsD TRUE 0.999 0.000 0.776 0.004 Y NA
 5871509 5871510 ECS88_3344 ECS88_3345 epsD yghF TRUE 0.993 30.000 0.575 0.004 Y NA
 5871510 5871511 ECS88_3345 ECS88_3346 yghF yghG FALSE 0.103 147.000 0.000 NA   NA
 5871511 5871512 ECS88_3346 ECS88_3347 yghG pppA FALSE 0.299 66.000 0.000 NA   NA
 5871512 5871513 ECS88_3347 ECS88_3348 pppA yghJ FALSE 0.078 164.000 0.000 NA   NA
 5871513 5871514 ECS88_3348 ECS88_3349 yghJ yghK FALSE 0.006 466.000 0.000 NA   NA
 5871516 5871517 ECS88_3350 ECS88_3351 glcB glcG TRUE 0.742 22.000 0.052 NA   NA
 5871517 5871518 ECS88_3351 ECS88_3352 glcG glcF TRUE 0.925 5.000 0.057 NA   NA
 5871518 5871519 ECS88_3352 ECS88_3353 glcF glcE TRUE 0.991 11.000 0.074 0.023 Y NA
 5871519 5871520 ECS88_3353 ECS88_3354 glcE glcD TRUE 0.996 0.000 0.070 0.007 Y NA
 5871523 5871524 ECS88_3357 ECS88_3358     FALSE 0.217 -213.000 0.000 NA   NA
 5871524 5871525 ECS88_3358 ECS88_3359     TRUE 0.693 32.000 0.064 1.000   NA
 5871525 5871526 ECS88_3359 ECS88_3360     TRUE 0.966 0.000 0.091 1.000   NA
 5871527 5871528 ECS88_3361 ECS88_3362     TRUE 0.919 -84.000 0.631 0.066   NA
 5871528 5871529 ECS88_3362 ECS88_3363     TRUE 0.658 31.000 0.000 NA   NA
 5871529 5871530 ECS88_3363 ECS88_3364     TRUE 0.947 0.000 0.000 NA   NA
 5871530 5871531 ECS88_3364 ECS88_3365     TRUE 0.996 0.000 0.667 NA   NA
 5871531 5871532 ECS88_3365 ECS88_3366   yghR TRUE 0.920 46.000 0.667 NA   NA
 5871532 5871533 ECS88_3366 ECS88_3367 yghR yghS TRUE 0.648 32.000 0.000 NA   NA
 5871535 5871536 ECS88_3369 ECS88_3370 pitB gss FALSE 0.010 292.000 0.000 1.000 N NA
 5871538 5871539 ECS88_3372 ECS88_3373 hybG hybF TRUE 0.876 13.000 0.000 NA   NA
 5871539 5871540 ECS88_3373 ECS88_3374 hybF hybE TRUE 0.830 -7.000 0.055 NA   NA
 5871540 5871541 ECS88_3374 ECS88_3375 hybE hybD TRUE 0.959 -7.000 0.291 NA   NA
 5871541 5871542 ECS88_3375 ECS88_3376 hybD hybC TRUE 0.999 0.000 0.828 1.000 Y NA
 5871542 5871543 ECS88_3376 ECS88_3377 hybC hybB TRUE 0.986 -3.000 0.000 NA Y NA
 5871543 5871544 ECS88_3377 ECS88_3378 hybB hybA TRUE 0.953 -10.000 0.000 NA Y NA
 5871544 5871545 ECS88_3378 ECS88_3379 hybA hybO TRUE 0.998 3.000 0.615 NA Y NA
 5871545 5871546 ECS88_3379 ECS88_3380 hybO   TRUE 0.914 7.000 0.051 NA   NA
 5871546 5871547 ECS88_3380 ECS88_3381   yghW TRUE 0.969 -3.000 0.167 NA   NA
 5871547 5871548 ECS88_3381 ECS88_3382 yghW   FALSE 0.104 119.000 0.017 NA   NA
 5871552 5871553 ECS88_3386 ECS88_3387 exbD exbB TRUE 0.999 7.000 0.810 0.054 Y NA
 5871554 5871555 ECS88_3388 ECS88_3389 metC yghB FALSE 0.292 140.000 0.212 NA   NA
 5871557 5871558 ECS88_3391 ECS88_3392 yqhD dkgA TRUE 0.455 105.000 0.200 1.000   NA
 5871558 5871559 ECS88_3392 ECS88_3393 dkgA yqhG FALSE 0.051 200.000 0.080 NA   NA
 5871559 5871560 ECS88_3393 ECS88_3394 yqhG yqhH FALSE 0.414 51.000 0.000 NA   NA
 5871562 5871563 ECS88_3397 ECS88_3398     FALSE 0.010 287.000 0.000 1.000 N NA
 5871563 5871564 ECS88_3398 ECS88_3399     TRUE 0.949 -3.000 0.027 0.022 N NA
 5871564 5871565 ECS88_3399 ECS88_3400     TRUE 0.768 11.000 0.027 1.000 N NA
 5871565 5871566 ECS88_3400 ECS88_3401     FALSE 0.195 73.000 0.000 1.000 N NA
 5871566 5871567 ECS88_3401 ECS88_3402     TRUE 0.986 42.000 1.000 NA Y NA
 5871567 5871568 ECS88_3402 ECS88_3403   ygiK TRUE 0.989 -31.000 1.000 NA Y NA
 5871569 5871570 ECS88_3405 ECS88_3406 sufI plsC FALSE 0.378 75.000 0.154 1.000 N NA
 5871570 5871571 ECS88_3406 ECS88_3407 plsC parC FALSE 0.013 235.000 0.043 1.000 N NA
 5871571 5871572 ECS88_3407 ECS88_3408 parC ygiS FALSE 0.083 138.000 0.000 1.000 N NA
 5871572 5871573 ECS88_3408 ECS88_3409 ygiS ygiV FALSE 0.111 109.000 0.000 NA N NA
 5871573 5871574 ECS88_3409 ECS88_3410 ygiV ygiW FALSE 0.372 53.000 0.053 NA   NA
 5871575 5871576 ECS88_3411 ECS88_3412 qseB qseC TRUE 0.998 -3.000 0.526 1.000 Y NA
 5871577 5871578 ECS88_3413 ECS88_3414 ygiZ   TRUE 0.996 7.000 1.000 NA   NA
 5871578 5871579 ECS88_3414 ECS88_3415     TRUE 0.640 -24.000 0.000 NA   NA
 5871580 5871581 ECS88_3416 ECS88_3417 mdaB ygiN TRUE 0.805 31.000 0.025 0.022   NA
 5871582 5871583 ECS88_3418 ECS88_3419     TRUE 0.974 -3.000 0.242 1.000 N NA
 5871583 5871584 ECS88_3419 ECS88_3420     TRUE 0.901 -52.000 0.156 1.000 Y NA
 5871584 5871585 ECS88_3420 ECS88_3421     TRUE 0.996 -3.000 0.182 0.042 Y NA
 5871585 5871586 ECS88_3421 ECS88_3422     TRUE 0.999 -3.000 0.857 1.000 Y NA
 5871588 5871589 ECS88_3424 ECS88_3425 parE yqiA TRUE 0.871 29.000 0.217 NA   NA
 5871589 5871590 ECS88_3425 ECS88_3426 yqiA cpdA TRUE 0.992 0.000 0.427 NA   NA
 5871590 5871591 ECS88_3426 ECS88_3427 cpdA yqiB TRUE 0.951 25.000 0.433 NA   NA
 5871591 5871592 ECS88_3427 ECS88_3428 yqiB nudF TRUE 0.992 1.000 0.443 NA   NA
 5871593 5871594 ECS88_3429 ECS88_3430 tolC ygiB FALSE 0.162 244.000 0.480 NA   NA
 5871594 5871595 ECS88_3430 ECS88_3431 ygiB ygiC TRUE 0.993 6.000 0.632 NA   NA
 5871595 5871596 ECS88_3431 ECS88_3432 ygiC assT FALSE 0.006 485.000 0.000 NA   NA
 5871596 5871597 ECS88_3432 ECS88_3433 assT dsbA TRUE 0.976 18.000 0.500 1.000   NA
 5871597 5871598 ECS88_3433 ECS88_3434 dsbA   TRUE 0.988 15.000 0.375 0.003   NA
 5871602 5871603 ECS88_3439 ECS88_3440 ygiL yqiG TRUE 0.933 87.000 0.667 1.000 Y NA
 5871603 5871604 ECS88_3440 ECS88_3442 yqiG yqiH TRUE 0.998 7.000 0.667 1.000 Y NA
 5871604 5871605 ECS88_3442 ECS88_3443 yqiH yqiI TRUE 0.988 -3.000 0.400 NA   NA
 5871606 5871607 ECS88_3444 ECS88_misc_RNA_66 ribB   FALSE 0.204 104.000 0.000 NA   NA
 5871610 5871611 ECS88_3447 ECS88_3448 yqiJ yqiK TRUE 0.966 27.000 0.641 NA   NA
 5871612 5871613 ECS88_misc_RNA_67 ECS88_misc_RNA_68 rygC rygD FALSE 0.243 -148.000 0.000 NA   NA
 5871613 5871614 ECS88_misc_RNA_68 ECS88_3449 rygD rfaE TRUE 0.482 45.000 0.000 NA   NA
 5871614 5871615 ECS88_3449 ECS88_3450 rfaE glnE TRUE 0.422 48.000 0.083 1.000 N NA
 5871615 5871616 ECS88_3450 ECS88_3451 glnE ygiF TRUE 0.763 23.000 0.053 1.000   NA
 5871616 5871617 ECS88_3451 ECS88_3452 ygiF   TRUE 0.825 17.000 0.000 NA   NA
 5871618 5871619 ECS88_3453 ECS88_3454 htrG cca FALSE 0.309 64.000 0.106 NA N NA
 5871620 5871621 ECS88_3455 ECS88_3456 bacA folB FALSE 0.290 91.000 0.128 1.000 N NA
 5871624 5871625 ECS88_3459 ECS88_3460 ttdA ttdB TRUE 0.999 -3.000 0.667 0.000 Y NA
 5871625 5871626 ECS88_3460 ECS88_3461 ttdB ygjE FALSE 0.263 48.000 0.037 1.000 N NA
 5871628 5871629 ECS88_3463 ECS88_3464 rpsU dnaG FALSE 0.145 111.000 0.067 1.000 N NA
 5871629 5871630 ECS88_3464 ECS88_3465 dnaG rpoD FALSE 0.150 195.000 0.299 1.000 N NA
 5871638 5871639 ECS88_3472 ECS88_3473 ebgR ebgA FALSE 0.081 184.000 0.136 1.000 N NA
 5871639 5871640 ECS88_3473 ECS88_3474 ebgA ebgC TRUE 0.998 -3.000 0.682 NA Y NA
 5871640 5871641 ECS88_3474 ECS88_3475 ebgC ygjI TRUE 0.710 63.000 0.412 NA N NA
 5871641 5871642 ECS88_3475 ECS88_3476 ygjI ygjJ FALSE 0.132 134.000 0.000 NA   NA
 5871642 5871643 ECS88_3476 ECS88_3477 ygjJ ygjK TRUE 0.825 17.000 0.000 NA   NA
 5871643 5871644 ECS88_3477 ECS88_3478 ygjK fadH FALSE 0.081 171.000 0.000 1.000   NA
 5871646 5871647 ECS88_3480 ECS88_3481 ygjP ygjQ FALSE 0.170 77.000 0.019 NA   NA
 5871647 5871648 ECS88_3481 ECS88_3482 ygjQ ygjR FALSE 0.226 61.000 0.019 NA   NA
 5871648 5871649 ECS88_3482 ECS88_misc_RNA_69 ygjR sraF FALSE 0.258 77.000 0.000 NA   NA
 5871649 5871650 ECS88_misc_RNA_69 ECS88_3484 sraF alx TRUE 0.803 19.000 0.000 NA   NA
 5871650 5871651 ECS88_3484 ECS88_3485 alx sstT FALSE 0.007 324.000 0.000 1.000 N NA
 5871652 5871653 ECS88_3486 ECS88_3487 ygjV uxaA FALSE 0.378 83.000 0.126 NA   NA
 5871653 5871654 ECS88_3487 ECS88_3488 uxaA uxaC TRUE 0.977 15.000 0.092 1.000 Y NA
 5871655 5871656 ECS88_3489 ECS88_3490 exuT exuR TRUE 0.502 130.000 0.433 1.000 N NA
 5871656 5871657 ECS88_3490 ECS88_3491 exuR yqjA FALSE 0.010 345.000 0.000 NA   NA
 5871657 5871658 ECS88_3491 ECS88_3492 yqjA yqjB TRUE 0.992 4.000 0.529 NA   NA
 5871658 5871659 ECS88_3492 ECS88_3493 yqjB yqjC TRUE 0.614 147.000 0.684 NA   NA
 5871659 5871660 ECS88_3493 ECS88_3494 yqjC yqjD TRUE 0.938 38.000 0.609 NA   NA
 5871660 5871661 ECS88_3494 ECS88_3495 yqjD yqjE TRUE 0.977 3.000 0.185 NA   NA
 5871661 5871662 ECS88_3495 ECS88_3496 yqjE yqjK TRUE 0.911 -10.000 0.185 NA   NA
 5871662 5871663 ECS88_3496 ECS88_3497 yqjK yqjF FALSE 0.114 187.000 0.161 NA   NA
 5871663 5871664 ECS88_3497 ECS88_3498 yqjF yqjG FALSE 0.279 70.000 0.000 NA   NA
 5871664 5871665 ECS88_3498 ECS88_3499 yqjG yhaH FALSE 0.016 283.000 0.000 NA   NA
 5871667 5871668 ECS88_3501 ECS88_3502 yhaK yhaL TRUE 0.607 23.000 0.005 NA   NA
 5871669 5871670 ECS88_3503 ECS88_3504 yhaM yhaO TRUE 0.832 28.000 0.157 NA   NA
 5871670 5871671 ECS88_3504 ECS88_3505 yhaO tdcG FALSE 0.058 338.000 0.000 1.000 Y NA
 5871671 5871672 ECS88_3505 ECS88_3506 tdcG tdcF FALSE 0.349 72.000 0.150 NA N NA
 5871672 5871673 ECS88_3506 ECS88_3507 tdcF tdcE TRUE 0.768 14.000 0.000 NA N NA
 5871673 5871674 ECS88_3507 ECS88_3508 tdcE tdcD TRUE 0.966 34.000 0.286 1.000 Y NA
 5871674 5871675 ECS88_3508 ECS88_3509 tdcD tdcC TRUE 0.961 14.000 0.308 1.000 N NA
 5871675 5871676 ECS88_3509 ECS88_3510 tdcC tdcB TRUE 0.941 22.000 0.029 1.000 Y NA
 5871676 5871677 ECS88_3510 ECS88_3511 tdcB tdcA FALSE 0.086 93.000 0.023 1.000 N NA
 5871677 5871678 ECS88_3511 ECS88_misc_RNA_70 tdcA rnpB FALSE 0.004 1099.000 0.000 NA   NA
 5871678 5871679 ECS88_misc_RNA_70 ECS88_3512 rnpB garK TRUE 0.640 33.000 0.000 NA   NA
 5871679 5871680 ECS88_3512 ECS88_3513 garK garR TRUE 0.896 16.000 0.152 1.000 N NA
 5871680 5871681 ECS88_3513 ECS88_3514 garR garL TRUE 0.922 30.000 0.424 1.000 N NA
 5871681 5871682 ECS88_3514 ECS88_3515 garL garP TRUE 0.980 16.000 0.143 1.000 Y NA
 5871685 5871686 ECS88_3518 ECS88_3519 kbaZ agaV TRUE 0.980 23.000 0.280 1.000 Y NA
 5871686 5871687 ECS88_3519 ECS88_3520 agaV   TRUE 0.999 11.000 0.905 0.016 Y NA
 5871687 5871688 ECS88_3520 ECS88_3521     TRUE 0.994 -16.000 0.619 0.016 Y NA
 5871688 5871689 ECS88_3521 ECS88_3522     TRUE 0.997 18.000 0.692 0.016 Y NA
 5871689 5871690 ECS88_3522 ECS88_3523   agaA TRUE 0.933 -24.000 0.104 1.000 Y NA
 5871690 5871691 ECS88_3523 ECS88_3524 agaA agaS FALSE 0.006 349.000 0.000 1.000 N NA
 5871691 5871692 ECS88_3524 ECS88_3525 agaS kbaY TRUE 0.974 13.000 0.391 1.000 N NA
 5871692 5871693 ECS88_3525 ECS88_3526 kbaY agaB FALSE 0.362 167.000 0.087 1.000 Y NA
 5871693 5871694 ECS88_3526 ECS88_3527 agaB agaC TRUE 0.978 39.000 0.333 0.011 Y NA
 5871694 5871695 ECS88_3527 ECS88_3528 agaC agaD TRUE 0.994 -10.000 0.444 0.011 Y NA
 5871695 5871696 ECS88_3528 ECS88_3529 agaD agaI TRUE 0.992 1.000 0.080 1.000 Y NA
 5871698 5871699 ECS88_3531 ECS88_3532 yraM yraN TRUE 0.756 -42.000 0.172 1.000   NA
 5871699 5871700 ECS88_3532 ECS88_3533 yraN yraO TRUE 0.893 20.000 0.187 1.000 N NA
 5871700 5871701 ECS88_3533 ECS88_3534 yraO ecfH TRUE 0.992 10.000 0.613 NA   NA
 5871702 5871703 ECS88_3535 ECS88_3536 yraQ yraR FALSE 0.234 73.000 0.045 NA   NA
 5871707 5871708 ECS88_3540 ECS88_3541 yhbS yhbT TRUE 0.970 -6.000 0.295 1.000   NA
 5871709 5871710 ECS88_3542 ECS88_3543 yhbU yhbV TRUE 0.999 9.000 0.948 0.004 Y NA
 5871710 5871711 ECS88_3543 ECS88_3544 yhbV yhbW FALSE 0.104 81.000 0.041 NA N NA
 5871712 5871713 ECS88_3545 ECS88_3546 mtr deaD FALSE 0.025 154.000 0.009 1.000 N NA
 5871713 5871714 ECS88_3546 ECS88_3547 deaD nlpI FALSE 0.064 180.000 0.053 1.000   NA
 5871714 5871715 ECS88_3547 ECS88_3548 nlpI pnp FALSE 0.242 109.000 0.071 1.000   NA
 5871717 5871718 ECS88_3549 ECS88_3550 rpsO truB TRUE 0.585 149.000 0.211 1.000 Y NA
 5871718 5871719 ECS88_3550 ECS88_3551 truB rbfA TRUE 0.997 0.000 0.318 1.000 Y NA
 5871719 5871720 ECS88_3551 ECS88_3552 rbfA infB TRUE 0.737 164.000 0.530 1.000 Y NA
 5871720 5871721 ECS88_3552 ECS88_3553 infB nusA TRUE 0.922 25.000 0.342 1.000 N NA
 5871721 5871722 ECS88_3553 ECS88_3554 nusA yhbC TRUE 0.971 28.000 0.759 NA   NA
 5871722 5871723 ECS88_3554 ECS88_tRNA65 yhbC   FALSE 0.037 207.000 0.000 NA   NA
 5871725 5871726 ECS88_3556 ECS88_tRNA64 yhbX   FALSE 0.006 454.000 0.000 NA   NA
 5871726 5871727 ECS88_tRNA64 ECS88_3557   secG TRUE 0.852 15.000 0.000 NA   NA
 5871727 5871728 ECS88_3557 ECS88_3558 secG glmM FALSE 0.008 228.000 0.016 1.000 N NA
 5871728 5871729 ECS88_3558 ECS88_3559 glmM folP TRUE 0.943 -7.000 0.260 1.000 N NA
 5871729 5871730 ECS88_3559 ECS88_3560 folP ftsH TRUE 0.548 90.000 0.325 1.000 N NA
 5871730 5871731 ECS88_3560 ECS88_3561 ftsH rrmJ FALSE 0.306 100.000 0.152 1.000 N NA
 5871735 5871736 ECS88_3565 ECS88_3566 obgE yhbE TRUE 0.785 16.000 0.015 1.000   NA
 5871736 5871737 ECS88_3566 ECS88_3567 yhbE rpmA FALSE 0.116 127.000 0.019 1.000   NA
 5871737 5871738 ECS88_3567 ECS88_3568 rpmA rplU TRUE 0.997 21.000 0.667 0.009 Y NA
 5871739 5871740 ECS88_3569 ECS88_3570 ispB sfsB FALSE 0.017 233.000 0.000 1.000 N NA
 5871741 5871742 ECS88_3571 ECS88_3572 murA yrbA TRUE 0.628 55.000 0.258 NA N NA
 5871742 5871743 ECS88_3572 ECS88_3573 yrbA yrbB FALSE 0.405 160.000 0.453 NA   NA
 5871743 5871744 ECS88_3573 ECS88_3574 yrbB yrbC TRUE 0.988 0.000 0.308 NA   NA
 5871744 5871745 ECS88_3574 ECS88_3575 yrbC yrbD TRUE 0.920 19.000 0.188 NA   NA
 5871745 5871746 ECS88_3575 ECS88_3576 yrbD yrbE TRUE 0.992 5.000 0.562 NA   NA
 5871746 5871747 ECS88_3576 ECS88_3577 yrbE yrbF TRUE 0.997 8.000 0.530 NA Y NA
 5871748 5871749 ECS88_3578 ECS88_3580 yrbG kdsD TRUE 0.946 14.000 0.226 1.000 N NA
 5871749 5871750 ECS88_3580 ECS88_3581 kdsD kdsC TRUE 0.976 21.000 0.598 1.000   NA
 5871750 5871751 ECS88_3581 ECS88_3582 kdsC yrbK TRUE 0.993 -3.000 0.617 NA   NA
 5871751 5871752 ECS88_3582 ECS88_3583 yrbK lptA TRUE 0.917 -31.000 0.459 NA   NA
 5871752 5871753 ECS88_3583 ECS88_3584 lptA lptB TRUE 0.991 7.000 0.543 NA   NA
 5871753 5871754 ECS88_3584 ECS88_3585 lptB rpoN TRUE 0.682 48.000 0.163 1.000   NA
 5871754 5871755 ECS88_3585 ECS88_3586 rpoN yhbH TRUE 0.974 23.000 0.820 NA N NA
 5871755 5871756 ECS88_3586 ECS88_3587 yhbH ptsN TRUE 0.701 118.000 0.728 NA N NA
 5871756 5871757 ECS88_3587 ECS88_3588 ptsN yhbJ TRUE 0.709 46.000 0.186 NA   NA
 5871757 5871758 ECS88_3588 ECS88_3590 yhbJ npr TRUE 0.973 -3.000 0.182 NA   NA
 5871758 5871759 ECS88_3590 ECS88_3591 npr yrbL FALSE 0.018 214.000 0.007 NA   NA
 5871760 5871761 ECS88_3592 ECS88_3593 mtgA elbB TRUE 0.933 -3.000 0.066 NA   NA
 5871763 5871764 ECS88_3594 ECS88_3595 arcB yhcC FALSE 0.338 96.000 0.113 1.000   NA
 5871765 5871766 ECS88_3596 ECS88_3597 gltB gltD TRUE 0.992 13.000 0.096 0.000 Y NA
 5871767 5871768 ECS88_3598 ECS88_3599 yhcH nanK TRUE 0.986 -3.000 0.000 NA Y NA
 5871768 5871769 ECS88_3599 ECS88_3600 nanK nanE TRUE 0.987 -3.000 0.000 1.000 Y NA
 5871769 5871770 ECS88_3600 ECS88_3601 nanE nanT TRUE 0.830 48.000 0.000 1.000 Y NA
 5871770 5871771 ECS88_3601 ECS88_3602 nanT nanA TRUE 0.491 109.000 0.318 1.000 N NA
 5871771 5871772 ECS88_3602 ECS88_3603 nanA nanR FALSE 0.164 122.000 0.091 1.000 N NA
 5871772 5871773 ECS88_3603 ECS88_3604 nanR sspB FALSE 0.116 108.000 0.009 NA   NA
 5871773 5871774 ECS88_3604 ECS88_3605 sspB sspA TRUE 0.995 6.000 0.831 NA   NA
 5871774 5871775 ECS88_3605 ECS88_3606 sspA rpsI FALSE 0.001 395.000 0.014 NA N NA
 5871775 5871776 ECS88_3606 ECS88_3607 rpsI rplM TRUE 0.997 16.000 0.601 0.009 Y NA
 5871776 5871777 ECS88_3607 ECS88_3608 rplM yhcM FALSE 0.016 220.000 0.003 NA   NA
 5871778 5871779 ECS88_3609 ECS88_3610 yhcB degQ FALSE 0.177 154.000 0.154 NA   NA
 5871779 5871780 ECS88_3610 ECS88_3611 degQ degS TRUE 0.906 90.000 0.262 0.002 Y NA
 5871782 5871783 ECS88_3613 ECS88_3614 argR yhcN FALSE 0.009 364.000 0.000 NA   NA
 5871784 5871785 ECS88_3615 ECS88_3616 yhcO aaeB FALSE 0.157 92.000 0.027 NA   NA
 5871785 5871786 ECS88_3616 ECS88_3617 aaeB aaeA TRUE 0.994 6.000 0.667 NA   NA
 5871786 5871787 ECS88_3617 ECS88_3618 aaeA aaeX TRUE 0.946 8.000 0.100 NA   NA
 5871789 5871790 ECS88_3620 ECS88_3621 tldD yhdP FALSE 0.076 156.000 0.050 NA   NA
 5871790 5871791 ECS88_3621 ECS88_3622 yhdP rng TRUE 0.648 68.000 0.296 NA   NA
 5871791 5871792 ECS88_3622 ECS88_3623 rng yhdE TRUE 0.951 -10.000 0.417 NA N NA
 5871792 5871793 ECS88_3623 ECS88_3624 yhdE mreD TRUE 0.960 9.000 0.206 NA N NA
 5871793 5871794 ECS88_3624 ECS88_3625 mreD   TRUE 0.712 -16.000 0.000 NA   NA
 5871794 5871795 ECS88_3625 ECS88_3626   mreC FALSE 0.285 -115.000 0.000 NA   NA
 5871795 5871796 ECS88_3626 ECS88_3627 mreC mreB TRUE 0.833 66.000 0.689 1.000 N NA
 5871799 5871800 ECS88_3630 ECS88_3631 yhdH accB FALSE 0.002 978.000 0.000 1.000 N NA
 5871800 5871801 ECS88_3631 ECS88_3632 accB accC TRUE 0.997 11.000 0.275 0.000 Y NA
 5871802 5871803 ECS88_3633 ECS88_3634     TRUE 0.928 -3.000 0.000 NA   NA
 5871803 5871804 ECS88_3634 ECS88_3635     TRUE 0.946 22.000 0.000 NA Y NA
 5871804 5871805 ECS88_3635 ECS88_3636     TRUE 0.999 1.000 0.818 1.000 Y NA
 5871805 5871806 ECS88_3636 ECS88_3637     TRUE 0.996 31.000 0.900 0.002 Y NA
 5871806 5871807 ECS88_3637 ECS88_3638     TRUE 0.924 30.000 0.000 1.000 Y NA
 5871808 5871809 ECS88_3639 ECS88_3640     TRUE 0.509 -43.000 0.000 NA   NA
 5871809 5871810 ECS88_3640 ECS88_3641     FALSE 0.254 79.000 0.000 NA   NA
 5871810 5871811 ECS88_3641 ECS88_3642   yhdT FALSE 0.218 93.000 0.000 NA   NA
 5871811 5871812 ECS88_3642 ECS88_3643 yhdT panF TRUE 0.981 -10.000 0.682 NA   NA
 5871812 5871813 ECS88_3643 ECS88_3644 panF prmA TRUE 0.796 12.000 0.041 1.000 N NA
 5871813 5871814 ECS88_3644 ECS88_3645 prmA dusB FALSE 0.056 329.000 0.042 1.000 Y NA
 5871814 5871815 ECS88_3645 ECS88_3646 dusB fis TRUE 0.814 26.000 0.161 1.000 N NA
 5871815 5871816 ECS88_3646 ECS88_3647 fis yhdJ TRUE 0.587 88.000 0.016 1.000 Y NA
 5871816 5871817 ECS88_3647 ECS88_3648 yhdJ yhdU FALSE 0.400 84.000 0.143 NA   NA
 5871819 5871820 ECS88_3650 ECS88_3651 acrE acrF TRUE 0.992 12.000 0.889 1.000 N NA
 5871820 5871821 ECS88_3651 ECS88_3652 acrF yhdV FALSE 0.022 253.000 0.000 NA   NA
 5871821 5871822 ECS88_3652 ECS88_3653 yhdV   FALSE 0.028 226.000 0.000 NA   NA
 5871822 5871823 ECS88_3653 ECS88_3654   aapJ FALSE 0.124 137.000 0.000 NA   NA
 5871823 5871824 ECS88_3654 ECS88_3655 aapJ aapQ TRUE 0.959 68.000 0.548 0.041 Y NA
 5871824 5871825 ECS88_3655 ECS88_3656 aapQ aapM TRUE 0.999 10.000 0.815 0.013 Y NA
 5871825 5871826 ECS88_3656 ECS88_3657 aapM aapP TRUE 0.998 8.000 0.734 1.000 Y NA
 5871827 5871828 ECS88_5S_2 ECS88_tRNA63     TRUE 0.535 41.000 0.000 NA   NA
 5871828 5871829 ECS88_tRNA63 ECS88_5S_1     TRUE 0.876 13.000 0.000 NA   NA
 5871829 5871830 ECS88_5S_1 ECS88_23S_1     FALSE 0.214 95.000 0.000 NA   NA
 5871830 5871831 ECS88_23S_1 ECS88_tRNA62     FALSE 0.056 184.000 0.000 NA   NA
 5871831 5871832 ECS88_tRNA62 ECS88_tRNA61     TRUE 0.506 43.000 0.000 NA   NA
 5871832 5871833 ECS88_tRNA61 ECS88_16S_1     FALSE 0.283 69.000 0.000 NA   NA
 5871835 5871836 ECS88_3668 ECS88_3669 yrdB aroE TRUE 0.912 -3.000 0.043 NA   NA
 5871836 5871837 ECS88_3669 ECS88_3670 aroE yrdC TRUE 0.910 5.000 0.087 NA N NA
 5871837 5871838 ECS88_3670 ECS88_3671 yrdC yrdD TRUE 0.943 5.000 0.137 NA N NA
 5871838 5871839 ECS88_3671 ECS88_3672 yrdD smg TRUE 0.914 29.000 0.331 NA   NA
 5871839 5871840 ECS88_3672 ECS88_3673 smg smf TRUE 0.736 -28.000 0.124 NA   NA
 5871841 5871842 ECS88_3674 ECS88_3675 def fmt TRUE 0.985 15.000 0.058 0.013 Y NA
 5871842 5871843 ECS88_3675 ECS88_3676 fmt rsmB TRUE 0.924 52.000 0.305 1.000 Y NA
 5871843 5871844 ECS88_3676 ECS88_3677 rsmB trkA TRUE 0.809 22.000 0.122 1.000 N NA
 5871844 5871845 ECS88_3677 ECS88_3678 trkA mscL FALSE 0.065 130.000 0.035 1.000 N NA
 5871846 5871847 ECS88_3679 ECS88_3680 yhdL zntR TRUE 0.657 56.000 0.219 NA   NA
 5871847 5871848 ECS88_3680 ECS88_3681 zntR yhdN TRUE 0.931 11.000 0.095 NA   NA
 5871848 5871849 ECS88_3681 ECS88_3682 yhdN rplQ FALSE 0.120 107.000 0.012 NA   NA
 5871849 5871850 ECS88_3682 ECS88_3683 rplQ rpoA TRUE 0.946 41.000 0.873 1.000 N NA
 5871850 5871851 ECS88_3683 ECS88_3684 rpoA rpsD TRUE 0.952 26.000 0.549 1.000 N NA
 5871851 5871852 ECS88_3684 ECS88_3685 rpsD rpsK TRUE 0.990 34.000 0.509 0.011 Y NA
 5871852 5871853 ECS88_3685 ECS88_3686 rpsK rpsM TRUE 0.998 17.000 0.810 0.008 Y NA
 5871853 5871854 ECS88_3686 ECS88_3687 rpsM secY FALSE 0.004 295.000 0.011 1.000 N NA
 5871854 5871855 ECS88_3687 ECS88_3688 secY rplO TRUE 0.993 8.000 0.730 1.000 N NA
 5871855 5871856 ECS88_3688 ECS88_3689 rplO rpmD TRUE 0.999 4.000 0.653 0.001 Y NA
 5871856 5871857 ECS88_3689 ECS88_3690 rpmD rpsE TRUE 0.999 4.000 0.789 0.011 Y NA
 5871857 5871858 ECS88_3690 ECS88_3691 rpsE rplR TRUE 0.998 15.000 0.814 0.011 Y NA
 5871858 5871859 ECS88_3691 ECS88_3692 rplR rplF TRUE 0.999 10.000 0.815 0.008 Y NA
 5871859 5871860 ECS88_3692 ECS88_3693 rplF rpsH TRUE 0.999 13.000 0.808 0.008 Y NA
 5871860 5871861 ECS88_3693 ECS88_3694 rpsH rpsN TRUE 0.989 34.000 0.473 0.008 Y NA
 5871861 5871862 ECS88_3694 ECS88_3695 rpsN rplE TRUE 0.997 15.000 0.496 0.008 Y NA
 5871862 5871863 ECS88_3695 ECS88_3696 rplE rplX TRUE 0.998 15.000 0.758 0.008 Y NA
 5871863 5871864 ECS88_3696 ECS88_3697 rplX rplN TRUE 0.999 11.000 0.810 0.011 Y NA
 5871864 5871865 ECS88_3697 ECS88_3698 rplN rpsQ TRUE 0.887 165.000 0.791 0.011 Y NA
 5871865 5871866 ECS88_3698 ECS88_3699 rpsQ rpmC TRUE 0.999 0.000 0.828 0.008 Y NA
 5871866 5871867 ECS88_3699 ECS88_3700 rpmC rplP TRUE 0.999 0.000 0.802 0.008 Y NA
 5871867 5871868 ECS88_3700 ECS88_3701 rplP rpsC TRUE 0.999 13.000 0.828 0.011 Y NA
 5871868 5871869 ECS88_3701 ECS88_3702 rpsC rplV TRUE 0.997 18.000 0.719 0.011 Y NA
 5871869 5871870 ECS88_3702 ECS88_3703 rplV rpsS TRUE 0.998 15.000 0.769 0.011 Y NA
 5871870 5871871 ECS88_3703 ECS88_3704 rpsS rplB TRUE 0.998 17.000 0.820 0.011 Y NA
 5871871 5871872 ECS88_3704 ECS88_3705 rplB rplW TRUE 0.998 18.000 0.849 0.011 Y NA
 5871872 5871873 ECS88_3705 ECS88_3706 rplW rplD TRUE 0.999 -3.000 0.513 0.008 Y NA
 5871873 5871874 ECS88_3706 ECS88_3707 rplD rplC TRUE 0.998 11.000 0.486 0.008 Y NA
 5871874 5871875 ECS88_3707 ECS88_3708 rplC rpsJ TRUE 0.983 33.000 0.307 0.011 Y NA
 5871875 5871876 ECS88_3708 ECS88_3710 rpsJ pioO FALSE 0.024 238.000 0.000 NA   NA
 5871876 5871877 ECS88_3710 ECS88_3711 pioO gspA TRUE 0.918 2.000 0.031 NA   NA
 5871878 5871879 ECS88_3712 ECS88_3713 gspC gspD TRUE 0.994 -16.000 0.575 0.004 Y NA
 5871879 5871880 ECS88_3713 ECS88_3714 gspD gspE TRUE 0.999 10.000 0.776 0.004 Y NA
 5871880 5871881 ECS88_3714 ECS88_3715 gspE gspF TRUE 0.999 -3.000 0.653 0.004 Y NA
 5871881 5871882 ECS88_3715 ECS88_3716 gspF gspG TRUE 0.999 10.000 0.599 0.004 Y NA
 5871882 5871883 ECS88_3716 ECS88_3717 gspG gspH TRUE 0.998 8.000 0.425 0.004 Y NA
 5871883 5871884 ECS88_3717 ECS88_3718 gspH gspI TRUE 0.999 -3.000 0.605 0.004 Y NA
 5871884 5871885 ECS88_3718 ECS88_3719 gspI gspJ TRUE 0.997 -7.000 0.569 0.004 Y NA
 5871885 5871886 ECS88_3719 ECS88_3720 gspJ gspK TRUE 0.993 -7.000 0.461 1.000 Y NA
 5871886 5871887 ECS88_3720 ECS88_3721 gspK gspL TRUE 0.997 15.000 0.537 0.065 Y NA
 5871887 5871888 ECS88_3721 ECS88_3722 gspL gspM TRUE 0.996 -3.000 0.811 1.000   NA
 5871888 5871889 ECS88_3722 ECS88_3723 gspM gspO TRUE 0.955 0.000 0.000 1.000   NA
 5871890 5871891 ECS88_3724 ECS88_3725 bfr bfd TRUE 0.632 72.000 0.033 NA Y NA
 5871891 5871892 ECS88_3725 ECS88_3726 bfd chiA FALSE 0.071 169.000 0.000 NA   NA
 5871892 5871893 ECS88_3726 ECS88_3727 chiA tufA FALSE 0.017 292.000 0.000 1.000   NA
 5871893 5871894 ECS88_3727 ECS88_3728 tufA fusA TRUE 0.954 71.000 0.400 0.001 Y NA
 5871894 5871895 ECS88_3728 ECS88_3729 fusA rpsG TRUE 0.909 97.000 0.579 1.000 Y NA
 5871895 5871896 ECS88_3729 ECS88_3730 rpsG rpsL TRUE 0.957 97.000 0.620 0.002 Y NA
 5871896 5871897 ECS88_3730 ECS88_3731 rpsL tusB FALSE 0.083 126.000 0.058 NA N NA
 5871897 5871898 ECS88_3731 ECS88_3732 tusB tusC TRUE 0.998 7.000 0.804 NA Y NA
 5871898 5871899 ECS88_3732 ECS88_3733 tusC tusD TRUE 0.999 0.000 0.790 NA Y NA
 5871899 5871900 ECS88_3733 ECS88_3734 tusD yheO TRUE 0.983 0.000 0.220 NA   NA
 5871900 5871901 ECS88_3734 ECS88_3735 yheO fkpA FALSE 0.277 167.000 0.310 NA   NA
 5871903 5871904 ECS88_3737 ECS88_3738 slyD yheV TRUE 0.622 95.000 0.370 NA   NA
 5871904 5871905 ECS88_3738 ECS88_3739 yheV kefB TRUE 0.986 10.000 0.400 NA   NA
 5871905 5871906 ECS88_3739 ECS88_3740 kefB kefG TRUE 0.997 0.000 0.927 1.000   NA
 5871907 5871908 ECS88_3742 ECS88_3743 yheS yheT TRUE 0.911 0.000 0.016 NA   NA
 5871908 5871909 ECS88_3743 ECS88_3744 yheT yheU TRUE 0.956 -6.000 0.222 NA   NA
 5871909 5871910 ECS88_3744 ECS88_3745 yheU prkB TRUE 0.744 54.000 0.303 NA   NA
 5871911 5871912 ECS88_3746 ECS88_misc_RNA_73 yhfA crpTic TRUE 0.852 15.000 0.000 NA   NA
 5871913 5871914 ECS88_3747 ECS88_3748   crp TRUE 0.872 7.000 0.016 NA   NA
 5871914 5871915 ECS88_3748 ECS88_3749 crp yhfK TRUE 0.676 39.000 0.111 NA   NA
 5871916 5871917 ECS88_3750 ECS88_3751 argD pabA TRUE 0.812 86.000 0.088 0.010 Y NA
 5871917 5871918 ECS88_3751 ECS88_3752 pabA fic FALSE 0.326 32.000 0.008 1.000 N NA
 5871918 5871919 ECS88_3752 ECS88_3753 fic yhfG TRUE 0.786 -10.000 0.000 NA   NA
 5871919 5871920 ECS88_3753 ECS88_3754 yhfG ppiA TRUE 0.601 105.000 0.364 NA   NA
 5871921 5871922 ECS88_3755 ECS88_3756 tsgA nirB FALSE 0.010 262.000 0.000 NA N NA
 5871922 5871923 ECS88_3756 ECS88_3757 nirB nirD TRUE 0.998 -3.000 0.829 0.000 N NA
 5871923 5871924 ECS88_3757 ECS88_3758 nirD nirC TRUE 0.750 126.000 0.283 1.000 Y NA
 5871924 5871925 ECS88_3758 ECS88_3759 nirC cysG TRUE 0.729 19.000 0.000 1.000 N NA
 5871925 5871926 ECS88_3759 ECS88_3760 cysG yhfL FALSE 0.022 252.000 0.000 NA   NA
 5871927 5871928 ECS88_3761 ECS88_3762 yhfS yhfT TRUE 0.957 12.000 0.185 NA   NA
 5871928 5871929 ECS88_3762 ECS88_3763 yhfT yhfU TRUE 0.993 12.000 0.828 NA   NA
 5871929 5871930 ECS88_3763 ECS88_3764 yhfU php TRUE 0.980 11.000 0.312 1.000   NA
 5871930 5871931 ECS88_3764 ECS88_3765 php yhfW TRUE 0.955 -3.000 0.094 1.000   NA
 5871931 5871932 ECS88_3765 ECS88_3766 yhfW yhfX TRUE 0.994 1.000 0.625 NA N NA
 5871932 5871933 ECS88_3766 ECS88_3767 yhfX yhfY TRUE 0.536 84.000 0.233 NA   NA
 5871933 5871934 ECS88_3767 ECS88_3768 yhfY yhfZ TRUE 0.980 17.000 0.562 NA   NA
 5871934 5871935 ECS88_3768 ECS88_3769 yhfZ trpS FALSE 0.044 160.000 0.004 NA   NA
 5871935 5871936 ECS88_3769 ECS88_3770 trpS gph TRUE 0.912 -7.000 0.118 1.000   NA
 5871936 5871937 ECS88_3770 ECS88_3771 gph rpe TRUE 0.913 -7.000 0.120 1.000   NA
 5871937 5871938 ECS88_3771 ECS88_3772 rpe dam TRUE 0.671 18.000 0.040 1.000 N NA
 5871938 5871939 ECS88_3772 ECS88_3773 dam damX TRUE 0.470 107.000 0.234 NA   NA
 5871939 5871940 ECS88_3773 ECS88_3774 damX aroB FALSE 0.147 92.000 0.022 NA   NA
 5871940 5871941 ECS88_3774 ECS88_3775 aroB aroK TRUE 0.878 57.000 0.208 1.000 Y NA
 5871941 5871942 ECS88_3775 ECS88_3776 aroK hofQ FALSE 0.028 401.000 0.319 1.000 N NA
 5871942 5871943 ECS88_3776 ECS88_3777 hofQ yrfA FALSE 0.371 -88.000 0.072 NA   NA
 5871943 5871944 ECS88_3777 ECS88_3778 yrfA yrfB TRUE 0.965 -10.000 0.444 NA   NA
 5871944 5871945 ECS88_3778 ECS88_3779 yrfB yrfC TRUE 0.933 -16.000 0.348 NA   NA
 5871945 5871946 ECS88_3779 ECS88_3780 yrfC yrfD TRUE 0.997 0.000 0.870 NA   NA
 5871949 5871950 ECS88_3784 ECS88_3785 igaA yrfG TRUE 0.474 65.000 0.122 1.000   NA
 5871950 5871951 ECS88_3785 ECS88_3786 yrfG hslR TRUE 0.913 11.000 0.056 1.000   NA
 5871951 5871952 ECS88_3786 ECS88_3787 hslR hslO TRUE 0.798 25.000 0.140 1.000 N NA
 5871953 5871954 ECS88_3788 ECS88_3789 yhgE   FALSE 0.260 76.000 0.000 NA   NA
 5871956 5871957 ECS88_3791 ECS88_3792 envZ ompR TRUE 0.998 -3.000 0.584 1.000 Y NA
 5871958 5871959 ECS88_3793 ECS88_3794 greB yhgF TRUE 0.697 97.000 0.123 1.000 Y NA
 5871959 5871960 ECS88_3794 ECS88_3795 yhgF feoA FALSE 0.004 440.000 0.000 1.000 N NA
 5871960 5871961 ECS88_3795 ECS88_3796 feoA feoB TRUE 0.982 17.000 0.177 1.000 Y NA
 5871961 5871962 ECS88_3796 ECS88_3797 feoB yhgG TRUE 0.986 11.000 0.455 NA   NA
 5871962 5871963 ECS88_3797 ECS88_3798 yhgG yhgA FALSE 0.040 203.000 0.000 NA   NA
 5871965 5871966 ECS88_3801 ECS88_3803 gntX gntY FALSE 0.398 59.000 0.066 1.000   NA
 5871966 5871967 ECS88_3803 ECS88_3804 gntY gntT FALSE 0.011 361.000 0.000 1.000   NA
 5871968 5871969 ECS88_3805 ECS88_3806 malQ malP TRUE 0.994 10.000 0.137 0.015 Y NA
 5871971 5871972 ECS88_3808 ECS88_3809 rtcA rtcB TRUE 0.945 4.000 0.081 NA   NA
 5871973 5871974 ECS88_3810 ECS88_3811 rtcR rtcR FALSE 0.226 -189.000 0.000 NA   NA
 5871975 5871976 ECS88_3812 ECS88_3813 glpR glpG TRUE 0.937 17.000 0.190 1.000   NA
 5871976 5871977 ECS88_3813 ECS88_3814 glpG glpE TRUE 0.874 45.000 0.405 1.000   NA
 5871979 5871980 ECS88_3816 ECS88_3817     TRUE 0.938 3.000 0.000 NA   NA
 5871980 5871981 ECS88_3817 ECS88_3818     TRUE 0.938 3.000 0.000 NA   NA
 5871981 5871982 ECS88_3818 ECS88_3819   aufG FALSE 0.067 173.000 0.000 NA   NA
 5871982 5871983 ECS88_3819 ECS88_3820 aufG aufF TRUE 0.972 15.000 0.000 1.000 Y NA
 5871983 5871984 ECS88_3820 ECS88_3821 aufF aufE TRUE 0.997 7.000 0.500 1.000 Y NA
 5871984 5871985 ECS88_3821 ECS88_3822 aufE aufD TRUE 0.986 -55.000 0.667 0.007 Y NA
 5871985 5871986 ECS88_3822 ECS88_3823 aufD aufC TRUE 0.962 -9.000 0.000 1.000 Y NA
 5871986 5871987 ECS88_3823 ECS88_3824 aufC aufB TRUE 0.895 37.000 0.000 1.000 Y NA
 5871987 5871988 ECS88_3824 ECS88_3825 aufB aufA TRUE 0.685 74.000 0.000 1.000 Y NA
 5871988 5871989 ECS88_3825 ECS88_3826 aufA glgP FALSE 0.004 494.000 0.000 1.000 N NA
 5871989 5871990 ECS88_3826 ECS88_3827 glgP glgA TRUE 0.983 19.000 0.228 1.000 Y NA
 5871990 5871991 ECS88_3827 ECS88_3828 glgA glgC TRUE 0.997 0.000 0.307 1.000 Y NA
 5871991 5871992 ECS88_3828 ECS88_3829 glgC glgX TRUE 0.984 18.000 0.228 1.000 Y NA
 5871992 5871993 ECS88_3829 ECS88_3830 glgX glgB TRUE 0.993 -3.000 0.020 0.001 Y NA
 5871993 5871994 ECS88_3830 ECS88_3831 glgB asd FALSE 0.012 273.000 0.000 1.000 N NA
 5871996 5871997 ECS88_3833 ECS88_3834 gntU gntK TRUE 0.988 4.000 0.000 1.000 Y NA
 5871997 5871998 ECS88_3834 ECS88_3835 gntK gntR FALSE 0.082 139.000 0.000 1.000 N NA
 5871998 5871999 ECS88_3835 ECS88_3836 gntR yhhW FALSE 0.218 93.000 0.000 NA   NA
 5871999 5872000 ECS88_3836 ECS88_3837 yhhW yhhX TRUE 0.561 123.000 0.400 NA   NA
 5872003 5872004 ECS88_3839 ECS88_3840 yhhY yhhZ FALSE 0.024 236.000 0.000 NA   NA
 5872004 5872005 ECS88_3840 ECS88_3841 yhhZ yhhZ FALSE 0.134 133.000 0.000 NA   NA
 5872005 5872006 ECS88_3841 ECS88_3842 yhhZ yrhA TRUE 0.947 0.000 0.000 NA   NA
 5872006 5872007 ECS88_3842 ECS88_3843 yrhA yrhB FALSE 0.006 450.000 0.000 NA   NA
 5872010 5872011 ECS88_3846 ECS88_3847 ugpQ ugpC TRUE 0.918 -3.000 0.080 1.000 N NA
 5872011 5872012 ECS88_3847 ECS88_3848 ugpC ugpE TRUE 0.998 2.000 0.272 0.041 Y NA
 5872012 5872013 ECS88_3848 ECS88_3849 ugpE ugpA TRUE 0.997 -3.000 0.306 0.041 Y NA
 5872013 5872014 ECS88_3849 ECS88_3850 ugpA ugpB TRUE 0.959 98.000 0.793 0.041 Y NA
 5872014 5872015 ECS88_3850 ECS88_3851 ugpB livF FALSE 0.005 397.000 0.000 1.000 N NA
 5872015 5872016 ECS88_3851 ECS88_3852 livF livG TRUE 0.999 2.000 0.967 0.013 Y NA
 5872016 5872017 ECS88_3852 ECS88_3853 livG livM TRUE 0.998 -3.000 0.574 1.000 Y NA
 5872017 5872018 ECS88_3853 ECS88_3854 livM livH TRUE 0.999 -3.000 0.574 0.041 Y NA
 5872018 5872019 ECS88_3854 ECS88_3855 livH livK TRUE 0.830 48.000 0.000 1.000 Y NA
 5872022 5872023 ECS88_3858 ECS88_3859     TRUE 0.991 7.000 0.018 0.011 Y NA
 5872023 5872024 ECS88_3859 ECS88_3860     TRUE 0.981 17.000 0.000 0.015 Y NA
 5872024 5872025 ECS88_3860 ECS88_3861     TRUE 0.868 -79.000 0.000 0.015 Y NA
 5872025 5872026 ECS88_3861 ECS88_3862     TRUE 0.503 -28.000 0.000 1.000 N NA
 5872026 5872027 ECS88_3862 ECS88_3863     TRUE 0.922 0.000 0.000 1.000 N NA
 5872028 5872029 ECS88_3864 ECS88_3865 rpoH ftsX FALSE 0.013 245.000 0.051 1.000 N NA
 5872029 5872030 ECS88_3865 ECS88_3866 ftsX ftsE TRUE 0.978 -7.000 0.121 1.000 Y NA
 5872030 5872031 ECS88_3866 ECS88_3867 ftsE ftsY TRUE 0.975 3.000 0.117 0.071 N NA
 5872032 5872033 ECS88_3868 ECS88_3869 yhhF   FALSE 0.262 -133.000 0.063 NA   NA
 5872035 5872036 ECS88_3871 ECS88_3872 yhhN zntA TRUE 0.769 74.000 0.325 0.064   NA
 5872038 5872039 ECS88_3874 ECS88_3875 yhhQ dcrB FALSE 0.281 73.000 0.066 NA   NA
 5872041 5872042 ECS88_3877 ECS88_3878 yhhT acpT TRUE 0.736 55.000 0.300 NA   NA
 5872042 5872043 ECS88_3878 ECS88_3879 acpT nikA FALSE 0.133 111.000 0.000 1.000 N NA
 5872043 5872044 ECS88_3879 ECS88_3880 nikA nikB TRUE 0.999 0.000 0.833 0.053 Y NA
 5872044 5872045 ECS88_3880 ECS88_3881 nikB nikC TRUE 0.999 -3.000 0.629 0.001 Y NA
 5872045 5872046 ECS88_3881 ECS88_3882 nikC nikD TRUE 0.998 0.000 0.409 1.000 Y NA
 5872046 5872047 ECS88_3882 ECS88_3883 nikD nikE TRUE 0.997 -3.000 0.290 0.070 Y NA
 5872047 5872048 ECS88_3883 ECS88_3884 nikE nikR TRUE 0.828 6.000 0.031 1.000 N NA
 5872048 5872049 ECS88_3884 ECS88_3885 nikR   FALSE 0.347 190.000 0.000 0.060 Y NA
 5872049 5872050 ECS88_3885 ECS88_3886     TRUE 0.812 25.000 0.150 1.000 N NA
 5872050 5872051 ECS88_3886 ECS88_3887     TRUE 0.997 -3.000 0.231 0.011 Y NA
 5872051 5872052 ECS88_3887 ECS88_3888     TRUE 0.975 47.000 0.444 0.015 Y NA
 5872052 5872053 ECS88_3888 ECS88_3889     TRUE 0.988 -7.000 0.273 1.000 Y NA
 5872053 5872054 ECS88_3889 ECS88_3890     TRUE 0.957 -10.000 0.000 1.000 Y NA
 5872054 5872055 ECS88_3890 ECS88_3891     TRUE 0.980 32.000 0.429 1.000 Y NA
 5872056 5872057 ECS88_3892 ECS88_3893 yhhJ rbbA TRUE 0.997 0.000 0.500 0.005   NA
 5872057 5872058 ECS88_3893 ECS88_3894 rbbA yhiI TRUE 0.966 -3.000 0.049 0.078   NA
 5872063 5872064 ECS88_3900 ECS88_3901 uspA yhiP FALSE 0.008 317.000 0.000 1.000 N NA
 5872065 5872066 ECS88_3902 ECS88_3903 yhiQ prlC TRUE 0.945 8.000 0.098 NA   NA
 5872067 5872068 ECS88_3904 ECS88_3905 yhiR gor FALSE 0.392 72.000 0.100 1.000   NA
 5872070 5872071 ECS88_3907 ECS88_3908   arsC FALSE 0.011 333.000 0.000 NA   NA
 5872071 5872072 ECS88_3908 ECS88_3909 arsC yhiS FALSE 0.004 617.000 0.000 NA   NA
 5872072 5872073 ECS88_3909 ECS88_3910 yhiS slp FALSE 0.008 394.000 0.000 NA   NA
 5872073 5872074 ECS88_3910 ECS88_3911 slp yhiF FALSE 0.061 153.000 0.000 1.000 N NA
 5872075 5872076 ECS88_3912 ECS88_3913 chuS chuA TRUE 0.818 49.000 0.056 1.000 Y NA
 5872077 5872078 ECS88_3914 ECS88_3915 chuT   TRUE 0.506 20.000 0.010 1.000 N NA
 5872078 5872079 ECS88_3915 ECS88_3916     TRUE 0.913 13.000 0.135 1.000 N NA
 5872079 5872080 ECS88_3916 ECS88_3917     TRUE 0.914 0.000 0.054 1.000 N NA
 5872080 5872081 ECS88_3917 ECS88_3918   chuU FALSE 0.172 49.000 0.010 1.000 N NA
 5872081 5872082 ECS88_3918 ECS88_3919 chuU chuV TRUE 0.804 -156.000 0.220 1.000 Y NA
 5872083 5872084 ECS88_3920 ECS88_3921 yhiD hdeB FALSE 0.314 64.000 0.000 NA   NA
 5872084 5872085 ECS88_3921 ECS88_3922 hdeB hdeA FALSE 0.178 116.000 0.000 NA   NA
 5872086 5872087 ECS88_3923 ECS88_3924 hdeD gadE FALSE 0.004 799.000 0.000 NA   NA
 5872087 5872088 ECS88_3924 ECS88_3925 gadE mdtE FALSE 0.012 339.000 0.000 1.000   NA
 5872088 5872089 ECS88_3925 ECS88_3926 mdtE mdtF TRUE 0.633 25.000 0.000 1.000 N NA
 5872092 5872093 ECS88_3929 ECS88_3930 gadX gadA FALSE 0.006 368.000 0.000 1.000 N NA
 5872093 5872094 ECS88_3930 ECS88_3931 gadA yhjA FALSE 0.023 211.000 0.000 1.000 N NA
 5872097 5872098 ECS88_3934 ECS88_3935 yhjC yhjD TRUE 0.566 49.000 0.098 1.000   NA
 5872098 5872099 ECS88_3935 ECS88_3936 yhjD yhjE FALSE 0.009 393.000 0.000 1.000   NA
 5872100 5872101 ECS88_3937 ECS88_3938 yhjG yhjH FALSE 0.239 55.000 0.000 NA N NA
 5872102 5872103 ECS88_3939 ECS88_3940   kdgK FALSE 0.244 84.000 0.000 NA   NA
 5872104 5872105 ECS88_3941 ECS88_3942 yhjJ dctA FALSE 0.047 220.000 0.088 1.000   NA
 5872105 5872106 ECS88_3942 ECS88_3943 dctA yhjK FALSE 0.226 183.000 0.229 0.077 N NA
 5872106 5872107 ECS88_3943 ECS88_3944 yhjK bcsC FALSE 0.160 121.000 0.088 1.000 N NA
 5872107 5872108 ECS88_3944 ECS88_3945 bcsC bcsZ TRUE 0.876 -18.000 0.263 1.000 N NA
 5872108 5872109 ECS88_3945 ECS88_3946 bcsZ bcsB TRUE 0.934 7.000 0.000 1.000   NA
 5872109 5872110 ECS88_3946 ECS88_3947 bcsB bcsA TRUE 0.903 11.000 0.000 NA   NA
 5872110 5872111 ECS88_3947 ECS88_3948 bcsA bcsA TRUE 0.809 -9.000 0.000 NA   NA
 5872111 5872112 ECS88_3948 ECS88_3949 bcsA yhjQ TRUE 0.483 -51.000 0.000 NA   NA
 5872112 5872113 ECS88_3949 ECS88_3950 yhjQ yhjR TRUE 0.890 12.000 0.000 NA   NA
 5872114 5872115 ECS88_3951 ECS88_3952 bcsE bcsF TRUE 0.928 -3.000 0.000 NA   NA
 5872115 5872116 ECS88_3952 ECS88_3953 bcsF bcsG TRUE 0.928 -3.000 0.000 NA   NA
 5872119 5872120 ECS88_3956 ECS88_3957 ldrD ldrD FALSE 0.023 240.000 0.000 NA   NA
 5872124 5872125 ECS88_3960 ECS88_3961 dppF dppD TRUE 0.999 -3.000 0.500 0.001 Y NA
 5872125 5872126 ECS88_3961 ECS88_3962 dppD dppC TRUE 0.997 11.000 0.560 1.000 Y NA
 5872126 5872127 ECS88_3962 ECS88_3963 dppC dppB TRUE 0.999 10.000 0.779 0.040 Y NA
 5872127 5872128 ECS88_3963 ECS88_3964 dppB dppA TRUE 0.565 151.000 0.087 0.040 Y NA
 5872128 5872129 ECS88_3964 ECS88_tRNA60 dppA   FALSE 0.004 744.000 0.000 NA   NA
 5872129 5872130 ECS88_tRNA60 ECS88_3965   eptB FALSE 0.231 89.000 0.000 NA   NA
 5872130 5872131 ECS88_3965 ECS88_3966 eptB yhjX FALSE 0.028 324.000 0.000 0.064   NA
 5872131 5872132 ECS88_3966 ECS88_3967 yhjX yhjY FALSE 0.018 229.000 0.000 1.000 N NA
 5872133 5872134 ECS88_3968 ECS88_3969 tag yiaC TRUE 0.914 -3.000 0.028 1.000   NA
 5872136 5872137 ECS88_3971 ECS88_3972 yiaD tiaE FALSE 0.145 104.000 0.000 1.000 N NA
 5872139 5872140 ECS88_3974 ECS88_3975 yiaG cspA FALSE 0.092 281.000 0.000 1.000 Y NA
 5872141 5872142 ECS88_3976 ECS88_3977 glyS glyQ TRUE 0.999 10.000 0.651 0.000 Y NA
 5872142 5872143 ECS88_3977 ECS88_3978 glyQ ysaB FALSE 0.128 95.000 0.010 NA   NA
 5872145 5872146 ECS88_3980 ECS88_3981 yiaA yiaB FALSE 0.378 46.000 0.032 NA   NA
 5872146 5872147 ECS88_3981 ECS88_3982 yiaB xylB FALSE 0.137 169.000 0.143 NA   NA
 5872147 5872148 ECS88_3982 ECS88_3983 xylB xylA TRUE 0.655 72.000 0.034 1.000 Y NA
 5872149 5872150 ECS88_3984 ECS88_3985 xylF xylG TRUE 0.911 78.000 0.518 NA Y NA
 5872150 5872151 ECS88_3985 ECS88_3986 xylG xylH TRUE 0.982 -22.000 0.469 1.000 Y NA
 5872151 5872152 ECS88_3986 ECS88_3987 xylH   FALSE 0.338 -88.000 0.000 NA   NA
 5872152 5872153 ECS88_3987 ECS88_3988   xylR TRUE 0.786 -10.000 0.000 NA   NA
 5872155 5872156 ECS88_3990 ECS88_3991 malS avtA FALSE 0.058 178.000 0.085 1.000 N NA
 5872157 5872158 ECS88_3992 ECS88_3993 yiaI yiaJ TRUE 0.583 102.000 0.400 1.000 N NA
 5872159 5872160 ECS88_3994 ECS88_3995 yiaK yiaL TRUE 0.808 12.000 0.000 NA N NA
 5872160 5872161 ECS88_3995 ECS88_3996 yiaL   TRUE 0.748 23.000 0.000 NA   NA
 5872161 5872162 ECS88_3996 ECS88_3997   yiaM FALSE 0.238 114.000 0.091 NA   NA
 5872162 5872163 ECS88_3997 ECS88_3998 yiaM yiaN TRUE 0.941 -195.000 0.864 NA Y NA
 5872163 5872164 ECS88_3998 ECS88_3999 yiaN yiaO TRUE 0.977 13.000 0.000 1.000 Y NA
 5872164 5872165 ECS88_3999 ECS88_4000 yiaO lyxK TRUE 0.988 4.000 0.000 1.000 Y NA
 5872165 5872166 ECS88_4000 ECS88_4001 lyxK sgbH TRUE 0.999 -3.000 0.900 1.000 Y NA
 5872166 5872167 ECS88_4001 ECS88_4002 sgbH sgbU TRUE 0.991 -7.000 0.360 1.000 Y NA
 5872167 5872168 ECS88_4002 ECS88_4003 sgbU sgbE TRUE 0.988 -6.000 0.200 1.000 Y NA
 5872169 5872170 ECS88_4004 ECS88_4005 aldB   FALSE 0.223 108.000 0.000 1.000   NA
 5872170 5872171 ECS88_4005 ECS88_4006   yiaY FALSE 0.163 130.000 0.000 1.000   NA
 5872171 5872172 ECS88_4006 ECS88_4007 yiaY selB FALSE 0.015 191.000 0.015 1.000 N NA
 5872172 5872173 ECS88_4007 ECS88_4008 selB selA TRUE 0.996 -3.000 0.569 0.000 N NA
 5872173 5872174 ECS88_4008 ECS88_4009 selA yibF FALSE 0.109 98.000 0.040 1.000 N NA
 5872174 5872175 ECS88_4009 ECS88_4010 yibF yibH FALSE 0.252 71.000 0.081 1.000 N NA
 5872175 5872176 ECS88_4010 ECS88_4011 yibH yibI TRUE 0.993 3.000 0.556 NA   NA
 5872177 5872178 ECS88_4012 ECS88_4013 mtlA mtlD FALSE 0.172 319.000 0.292 1.000 Y NA
 5872178 5872179 ECS88_4013 ECS88_4014 mtlD mtlR TRUE 0.978 0.000 0.230 NA N NA
 5872181 5872182 ECS88_4016 ECS88_4017 yibL   FALSE 0.005 559.000 0.000 NA   NA
 5872182 5872183 ECS88_4017 ECS88_4018     FALSE 0.260 76.000 0.000 NA   NA
 5872183 5872184 ECS88_4018 ECS88_4019     TRUE 0.809 44.000 0.286 NA   NA
 5872184 5872185 ECS88_4019 ECS88_4020   lldP FALSE 0.005 410.000 0.000 1.000 N NA
 5872185 5872186 ECS88_4020 ECS88_4021 lldP lldR TRUE 0.995 0.000 0.652 1.000 N NA
 5872186 5872187 ECS88_4021 ECS88_4022 lldR lldD TRUE 0.981 -3.000 0.309 1.000 N NA
 5872187 5872188 ECS88_4022 ECS88_4023 lldD yibK FALSE 0.205 48.000 0.020 1.000 N NA
 5872189 5872190 ECS88_4024 ECS88_4025 cysE gpsA TRUE 0.668 80.000 0.429 1.000 N NA
 5872190 5872191 ECS88_4025 ECS88_4026 gpsA secB TRUE 0.977 0.000 0.206 1.000 N NA
 5872191 5872192 ECS88_4026 ECS88_4027 secB grxC FALSE 0.171 64.000 0.038 1.000 N NA
 5872192 5872193 ECS88_4027 ECS88_4028 grxC yibN FALSE 0.049 141.000 0.048 NA N NA
 5872194 5872195 ECS88_4029 ECS88_4030 gpmI envC TRUE 0.768 34.000 0.170 1.000 N NA
 5872195 5872196 ECS88_4030 ECS88_4031 envC yibQ TRUE 0.956 4.000 0.088 1.000   NA
 5872197 5872198 ECS88_4032 ECS88_4033 yibD tdh FALSE 0.012 239.000 0.000 NA N NA
 5872198 5872199 ECS88_4033 ECS88_4034 tdh kbl TRUE 0.988 10.000 0.547 1.000 N NA
 5872200 5872201 ECS88_4035 ECS88_4036 waaD waaF TRUE 0.990 10.000 0.146 1.000 Y NA
 5872201 5872202 ECS88_4036 ECS88_4037 waaF waaC TRUE 0.997 4.000 0.205 0.001 Y NA
 5872203 5872204 ECS88_4038 ECS88_4039 waaL waaV TRUE 0.629 46.000 0.133 NA   NA
 5872204 5872205 ECS88_4039 ECS88_4040 waaV waaW TRUE 0.644 82.000 0.000 NA Y NA
 5872205 5872206 ECS88_4040 ECS88_4041 waaW waaY TRUE 0.741 26.000 0.000 1.000   NA
 5872206 5872207 ECS88_4041 ECS88_4042 waaY waaT TRUE 0.986 10.000 0.375 1.000   NA
 5872207 5872208 ECS88_4042 ECS88_4043 waaT waaO TRUE 0.998 17.000 0.833 0.001 Y NA
 5872208 5872209 ECS88_4043 ECS88_4044 waaO waaP TRUE 0.859 16.000 0.000 1.000   NA
 5872209 5872210 ECS88_4044 ECS88_4045 waaP waaG TRUE 0.745 -16.000 0.000 1.000   NA
 5872210 5872211 ECS88_4045 ECS88_4046 waaG waaQ TRUE 0.989 -3.000 0.079 1.000 Y NA
 5872212 5872213 ECS88_4047 ECS88_4048 kdtA coaD TRUE 0.788 8.000 0.020 1.000 N NA
 5872214 5872215 ECS88_4049 ECS88_4050 mutM rpmG FALSE 0.100 98.000 0.034 1.000 N NA
 5872215 5872216 ECS88_4050 ECS88_4051 rpmG rpmB TRUE 0.992 21.000 0.332 0.008 Y NA
 5872216 5872217 ECS88_4051 ECS88_4052 rpmB yicR FALSE 0.008 217.000 0.002 1.000 N NA
 5872218 5872219 ECS88_4053 ECS88_4054 dfp dut TRUE 0.830 -19.000 0.201 1.000 N NA
 5872219 5872220 ECS88_4054 ECS88_4055 dut ttk FALSE 0.141 107.000 0.060 1.000 N NA
 5872221 5872222 ECS88_4056 ECS88_4057 pyrE rph FALSE 0.122 66.000 0.022 1.000 N NA
 5872223 5872224 ECS88_4058 ECS88_4059 yicC dinD FALSE 0.035 210.000 0.000 NA   NA
 5872224 5872225 ECS88_4059 ECS88_4060 dinD yicG FALSE 0.015 292.000 0.000 NA   NA
 5872227 5872228 ECS88_4063 ECS88_4064 gmk rpoZ TRUE 0.802 55.000 0.471 1.000 N NA
 5872228 5872229 ECS88_4064 ECS88_4065 rpoZ spoT TRUE 0.986 19.000 0.291 1.000 Y NA
 5872229 5872230 ECS88_4065 ECS88_4066 spoT trmH TRUE 0.927 7.000 0.095 1.000 N NA
 5872230 5872231 ECS88_4066 ECS88_4067 trmH recG TRUE 0.911 6.000 0.076 1.000 N NA
 5872233 5872234 ECS88_4070 ECS88_4071 yicE yicH TRUE 0.436 121.000 0.257 NA   NA
 5872235 5872236 ECS88_4072 ECS88_4073     TRUE 0.487 -58.000 0.000 1.000   NA
 5872236 5872237 ECS88_4073 ECS88_4074     TRUE 0.986 15.000 0.000 0.006 Y NA
 5872237 5872238 ECS88_4074 ECS88_4075     TRUE 0.883 81.000 0.167 0.002 Y NA
 5872238 5872239 ECS88_4075 ECS88_4076     TRUE 0.997 12.000 0.600 1.000 Y NA
 5872239 5872240 ECS88_4076 ECS88_4077     TRUE 0.975 25.000 0.107 0.011 Y NA
 5872240 5872241 ECS88_4077 ECS88_4078     TRUE 0.991 18.000 0.214 0.011 Y NA
 5872241 5872242 ECS88_4078 ECS88_4079     TRUE 0.895 27.000 0.143 0.011 N NA
 5872242 5872243 ECS88_4079 ECS88_4080   yicI FALSE 0.009 295.000 0.000 1.000 N NA
 5872243 5872244 ECS88_4080 ECS88_4081 yicI yicJ TRUE 0.984 10.000 0.000 1.000 Y NA
 5872245 5872246 ECS88_tRNA36 ECS88_4082     FALSE 0.392 -72.000 0.000 NA   NA
 5872246 5872247 ECS88_4082 ECS88_4083     FALSE 0.005 570.000 0.000 NA   NA
 5872247 5872248 ECS88_4083 ECS88_4084   yicL FALSE 0.014 297.000 0.000 NA   NA
 5872251 5872252 ECS88_4087 ECS88_4088 yicM yicN TRUE 0.768 46.000 0.250 NA   NA
 5872252 5872253 ECS88_4088 ECS88_4089 yicN yicO FALSE 0.393 53.000 0.000 NA   NA
 5872255 5872256 ECS88_4091 ECS88_4092 uhpT uhpC TRUE 0.597 138.000 0.000 0.040 Y NA
 5872256 5872257 ECS88_4092 ECS88_4093 uhpC uhpB TRUE 0.947 10.000 0.000 0.063 N NA
 5872257 5872258 ECS88_4093 ECS88_4094 uhpB uhpA TRUE 0.995 0.000 0.000 0.011 Y NA
 5872258 5872259 ECS88_4094 ECS88_4095 uhpA ilvN FALSE 0.418 73.000 0.118 1.000   NA
 5872259 5872260 ECS88_4095 ECS88_4096 ilvN ilvB TRUE 0.998 4.000 0.649 0.001   NA
 5872260 5872261 ECS88_4096 ECS88_5092 ilvB ivbL TRUE 0.447 106.000 0.216 NA   NA
 5872263 5872264 ECS88_4099 ECS88_4100 yidF yidG TRUE 0.990 -3.000 0.429 NA   NA
 5872264 5872265 ECS88_4100 ECS88_4101 yidG yidH TRUE 0.975 -10.000 0.571 NA   NA
 5872265 5872266 ECS88_4101 ECS88_4102 yidH yidJ FALSE 0.338 60.000 0.000 NA   NA
 5872266 5872267 ECS88_4102 ECS88_4103 yidJ yidJ TRUE 0.852 15.000 0.000 NA   NA
 5872267 5872268 ECS88_4103 ECS88_4104 yidJ yidK TRUE 0.928 -3.000 0.000 NA   NA
 5872268 5872269 ECS88_4104 ECS88_4105 yidK yidK FALSE 0.379 -75.000 0.000 NA   NA
 5872273 5872274 ECS88_4109 ECS88_4110 ibpB ibpA TRUE 0.614 112.000 0.099 NA Y NA
 5872278 5872279 ECS88_4114 ECS88_4115 dgoT dgoD FALSE 0.311 120.000 0.192 1.000 N NA
 5872279 5872280 ECS88_4115 ECS88_4116 dgoD dgoA TRUE 0.992 -3.000 0.385 0.044 N NA
 5872280 5872281 ECS88_4116 ECS88_4117 dgoA dgoK TRUE 0.994 -16.000 0.909 1.000 Y NA
 5872281 5872282 ECS88_4117 ECS88_4118 dgoK dgoR TRUE 0.994 -3.000 0.733 1.000 N NA
 5872284 5872285 ECS88_4120 ECS88_4121 yidA yidB FALSE 0.181 115.000 0.000 NA   NA
 5872285 5872286 ECS88_4121 ECS88_4122 yidB gyrB FALSE 0.023 240.000 0.000 NA   NA
 5872286 5872287 ECS88_4122 ECS88_4123 gyrB recF TRUE 0.985 29.000 0.249 0.002 Y NA
 5872287 5872288 ECS88_4123 ECS88_4124 recF dnaN TRUE 0.997 0.000 0.318 1.000 Y NA
 5872288 5872289 ECS88_4124 ECS88_4125 dnaN dnaA TRUE 0.996 5.000 0.328 1.000 Y NA
 5872290 5872291 ECS88_4126 ECS88_4127 rpmH rnpA TRUE 0.988 17.000 0.787 1.000   NA
 5872291 5872292 ECS88_4127 ECS88_4128 rnpA yidD TRUE 0.922 -36.000 0.540 NA   NA
 5872292 5872293 ECS88_4128 ECS88_4129 yidD yidC TRUE 0.992 3.000 0.461 NA   NA
 5872293 5872294 ECS88_4129 ECS88_4130 yidC trmE TRUE 0.479 106.000 0.221 1.000   NA
 5872294 5872295 ECS88_4130 ECS88_5093 trmE tnaC FALSE 0.023 242.000 0.000 NA   NA
 5872295 5872296 ECS88_5093 ECS88_4131 tnaC tnaA FALSE 0.036 221.000 0.077 NA   NA
 5872296 5872297 ECS88_4131 ECS88_4132 tnaA tnaB TRUE 0.740 92.000 0.154 1.000 Y NA
 5872297 5872298 ECS88_4132 ECS88_4133 tnaB mdtL FALSE 0.076 132.000 0.000 NA N NA
 5872298 5872299 ECS88_4133 ECS88_4134 mdtL yidZ TRUE 0.922 -25.000 0.526 NA N NA
 5872299 5872300 ECS88_4134 ECS88_4135 yidZ yieE FALSE 0.112 145.000 0.114 NA N NA
 5872300 5872301 ECS88_4135 ECS88_4136 yieE yieF TRUE 0.791 22.000 0.074 NA   NA
 5872303 5872304 ECS88_4138 ECS88_4139 yieH yieI FALSE 0.293 67.000 0.000 NA   NA
 5872305 5872306 ECS88_4140 ECS88_4141 yieK yieL TRUE 0.833 15.000 0.080 1.000 N NA
 5872306 5872307 ECS88_4141 ECS88_4142 yieL bglH TRUE 0.983 0.000 0.267 1.000 N NA
 5872307 5872308 ECS88_4142 ECS88_4143 bglH bglB TRUE 0.874 86.000 0.364 1.000 Y NA
 5872308 5872309 ECS88_4143 ECS88_4144 bglB bglF TRUE 0.993 19.000 0.562 1.000 Y NA
 5872309 5872310 ECS88_4144 ECS88_4145 bglF bglG TRUE 0.446 134.000 0.312 1.000   NA
 5872310 5872311 ECS88_4145 ECS88_4146 bglG phoU FALSE 0.016 286.000 0.000 NA   NA
 5872311 5872312 ECS88_4146 ECS88_4147 phoU pstB TRUE 0.990 15.000 0.317 NA Y NA
 5872312 5872313 ECS88_4147 ECS88_4148 pstB pstA TRUE 0.954 91.000 0.526 0.001 Y NA
 5872313 5872314 ECS88_4148 ECS88_4149 pstA pstC TRUE 0.999 0.000 0.537 0.001 Y NA
 5872314 5872315 ECS88_4149 ECS88_4150 pstC pstS TRUE 0.872 87.000 0.145 0.001 Y NA
 5872315 5872316 ECS88_4150 ECS88_4151 pstS glmS FALSE 0.008 314.000 0.000 1.000 N NA
 5872316 5872317 ECS88_4151 ECS88_4152 glmS glmU FALSE 0.336 161.000 0.055 1.000 Y NA
 5872317 5872318 ECS88_4152 ECS88_4153 glmU atpC FALSE 0.007 354.000 0.067 1.000 N NA
 5872318 5872319 ECS88_4153 ECS88_4154 atpC atpD TRUE 0.998 21.000 0.837 0.002 Y NA
 5872319 5872320 ECS88_4154 ECS88_4155 atpD atpG TRUE 0.996 27.000 0.724 0.002 Y NA
 5872320 5872321 ECS88_4155 ECS88_4156 atpG atpA TRUE 0.988 51.000 0.846 0.002 Y NA
 5872321 5872322 ECS88_4156 ECS88_4157 atpA atpH TRUE 0.999 13.000 0.864 0.002 Y NA
 5872322 5872323 ECS88_4157 ECS88_4158 atpH atpF TRUE 0.994 15.000 0.242 0.002 Y NA
 5872323 5872324 ECS88_4158 ECS88_4159 atpF atpE TRUE 0.977 62.000 0.666 0.002 Y NA
 5872324 5872325 ECS88_4159 ECS88_4160 atpE atpB TRUE 0.984 47.000 0.557 0.002 Y NA
 5872325 5872326 ECS88_4160 ECS88_4161 atpB atpI TRUE 0.998 9.000 0.291 0.002 Y NA
 5872326 5872327 ECS88_4161 ECS88_4162 atpI gidB FALSE 0.001 617.000 0.005 1.000 N NA
 5872327 5872328 ECS88_4162 ECS88_4163 gidB gidA TRUE 0.751 64.000 0.466 1.000 N NA
 5872328 5872329 ECS88_4163 ECS88_4164 gidA mioC FALSE 0.005 379.000 0.000 1.000 N NA
 5872329 5872330 ECS88_4164 ECS88_4165 mioC asnC FALSE 0.351 90.000 0.165 1.000 N NA
 5872332 5872333 ECS88_4167 ECS88_4168 yieM ravA TRUE 0.980 -6.000 0.443 NA   NA
 5872334 5872335 ECS88_4169 ECS88_4170 trkD rbsD FALSE 0.050 167.000 0.000 1.000 N NA
 5872335 5872336 ECS88_4170 ECS88_4171 rbsD rbsA TRUE 0.996 8.000 0.337 1.000 Y NA
 5872336 5872337 ECS88_4171 ECS88_4172 rbsA rbsC TRUE 0.998 5.000 0.504 1.000 Y NA
 5872337 5872338 ECS88_4172 ECS88_4173 rbsC rbsB TRUE 0.993 25.000 0.847 NA Y NA
 5872338 5872339 ECS88_4173 ECS88_4174 rbsB rbsK TRUE 0.778 126.000 0.347 NA Y NA
 5872339 5872340 ECS88_4174 ECS88_4175 rbsK rbsR TRUE 0.990 4.000 0.500 1.000 N NA
 5872341 5872342 ECS88_4176 ECS88_4177 hsrA yieP TRUE 0.837 23.000 0.100 1.000   NA
 5872343 5872344 ECS88_16S_4 ECS88_tRNA37     FALSE 0.239 86.000 0.000 NA   NA
 5872344 5872345 ECS88_tRNA37 ECS88_23S_4     FALSE 0.046 194.000 0.000 NA   NA
 5872345 5872346 ECS88_23S_4 ECS88_5S_5     FALSE 0.216 94.000 0.000 NA   NA
 5872346 5872347 ECS88_5S_5 ECS88_tRNA38     FALSE 0.404 52.000 0.000 NA   NA
 5872347 5872348 ECS88_tRNA38 ECS88_tRNA39     TRUE 0.918 9.000 0.000 NA   NA
 5872352 5872353 ECS88_4190 ECS88_4191 ilvL ilvG FALSE 0.373 140.000 0.091 0.002   NA
 5872353 5872354 ECS88_4191 ECS88_4192 ilvG ilvM TRUE 0.998 -3.000 0.943 0.001   NA
 5872354 5872355 ECS88_4192 ECS88_4193 ilvM ilvE TRUE 0.927 20.000 0.205 1.000   NA
 5872355 5872356 ECS88_4193 ECS88_4194 ilvE ilvD TRUE 0.745 65.000 0.075 1.000 Y NA
 5872356 5872357 ECS88_4194 ECS88_4195 ilvD ilvA TRUE 0.992 3.000 0.106 1.000 Y NA
 5872362 5872363 ECS88_4200 ECS88_4201 gpp   TRUE 0.925 6.000 0.000 NA   NA
 5872363 5872364 ECS88_4201 ECS88_4202   rhlB TRUE 0.489 -49.000 0.000 NA   NA
 5872365 5872366 ECS88_4203 ECS88_5094 trxA rhoL FALSE 0.062 141.000 0.004 NA   NA
 5872366 5872367 ECS88_5094 ECS88_4205 rhoL rho FALSE 0.141 85.000 0.002 NA   NA
 5872367 5872368 ECS88_4205 ECS88_4206 rho rfe FALSE 0.016 240.000 0.000 1.000 N NA
 5872368 5872369 ECS88_4206 ECS88_4207 rfe wzzE TRUE 0.999 12.000 0.735 0.004 Y NA
 5872369 5872370 ECS88_4207 ECS88_4208 wzzE rffE TRUE 0.981 56.000 0.677 0.004 Y NA
 5872370 5872371 ECS88_4208 ECS88_4209 rffE rffD TRUE 0.996 -3.000 0.348 1.000 Y NA
 5872371 5872372 ECS88_4209 ECS88_4210 rffD rffG TRUE 0.997 0.000 0.273 1.000 Y NA
 5872372 5872373 ECS88_4210 ECS88_4211 rffG rffH TRUE 0.998 19.000 0.739 0.002 Y NA
 5872373 5872374 ECS88_4211 ECS88_4212 rffH rffC FALSE 0.370 107.000 0.145 1.000   NA
 5872374 5872375 ECS88_4212 ECS88_4213 rffC rffA TRUE 0.981 5.000 0.248 1.000   NA
 5872375 5872376 ECS88_4213 ECS88_4214 rffA wzxE TRUE 0.983 2.000 0.218 1.000   NA
 5872376 5872377 ECS88_4214 ECS88_4215 wzxE rffT TRUE 0.994 -3.000 0.605 1.000   NA
 5872377 5872378 ECS88_4215 ECS88_4217 rffT wzyE TRUE 0.995 -3.000 0.684 1.000   NA
 5872378 5872379 ECS88_4217 ECS88_4218 wzyE rffM TRUE 0.970 3.000 0.126 1.000   NA
 5872379 5872380 ECS88_4218 ECS88_4219 rffM yifK FALSE 0.033 191.000 0.000 1.000 N NA
 5872380 5872381 ECS88_4219 ECS88_tRNA40 yifK   FALSE 0.205 103.000 0.000 NA   NA
 5872381 5872382 ECS88_tRNA40 ECS88_tRNA41     FALSE 0.344 59.000 0.000 NA   NA
 5872382 5872383 ECS88_tRNA41 ECS88_tRNA42     TRUE 0.777 21.000 0.000 NA   NA
 5872383 5872384 ECS88_tRNA42 ECS88_tRNA43     TRUE 0.506 43.000 0.000 NA   NA
 5872384 5872385 ECS88_tRNA43 ECS88_4221   aslB FALSE 0.103 147.000 0.000 NA   NA
 5872388 5872389 ECS88_4224 ECS88_4225 hemY hemX TRUE 0.993 3.000 0.144 1.000 Y NA
 5872389 5872390 ECS88_4225 ECS88_4226 hemX hemD TRUE 0.992 22.000 0.600 1.000 Y NA
 5872390 5872391 ECS88_4226 ECS88_4227 hemD hemC TRUE 0.997 -3.000 0.205 0.001 Y NA
 5872393 5872394 ECS88_4230 ECS88_4231 cyaY   TRUE 0.447 48.000 0.000 NA   NA
 5872394 5872395 ECS88_4231 ECS88_4232     TRUE 0.928 -3.000 0.000 NA   NA
 5872395 5872396 ECS88_4232 ECS88_4233     FALSE 0.242 85.000 0.000 NA   NA
 5872397 5872398 ECS88_4234 ECS88_4235 yifL dapF FALSE 0.225 37.000 0.021 NA N NA
 5872398 5872399 ECS88_4235 ECS88_4236 dapF yigA TRUE 0.971 -3.000 0.175 NA   NA
 5872399 5872400 ECS88_4236 ECS88_4237 yigA xerC TRUE 0.995 -3.000 0.714 NA   NA
 5872400 5872401 ECS88_4237 ECS88_4238 xerC yigB TRUE 0.992 0.000 0.367 1.000   NA
 5872401 5872402 ECS88_4238 ECS88_4239 yigB uvrD FALSE 0.408 84.000 0.128 1.000   NA
 5872403 5872404 ECS88_4240 ECS88_4241   yigE FALSE 0.246 83.000 0.000 NA   NA
 5872406 5872407 ECS88_4243 ECS88_4244     TRUE 0.993 -3.000 0.600 NA   NA
 5872407 5872408 ECS88_4244 ECS88_4245   rarD FALSE 0.013 311.000 0.000 NA   NA
 5872408 5872409 ECS88_4245 ECS88_4246 rarD yigI TRUE 0.505 52.000 0.099 NA   NA
 5872410 5872411 ECS88_4247 ECS88_4249 pldA recQ FALSE 0.157 125.000 0.000 NA   NA
 5872411 5872412 ECS88_4249 ECS88_4250 recQ recQ TRUE 0.615 35.000 0.000 NA   NA
 5872412 5872413 ECS88_4250 ECS88_4251 recQ rhtC FALSE 0.314 64.000 0.000 NA   NA
 5872415 5872416 ECS88_4253 ECS88_4254 pldB yigL TRUE 0.992 8.000 0.524 1.000   NA
 5872416 5872417 ECS88_4254 ECS88_4255 yigL yigM FALSE 0.308 76.000 0.067 1.000   NA
 5872420 5872421 ECS88_4258 ECS88_4259     FALSE 0.338 60.000 0.000 NA   NA
 5872421 5872422 ECS88_4259 ECS88_4260     TRUE 0.928 -3.000 0.000 NA   NA
 5872422 5872423 ECS88_4260 ECS88_4261     FALSE 0.094 151.000 0.000 NA   NA
 5872424 5872425 ECS88_4262 ECS88_4263   ptsG FALSE 0.419 42.000 0.000 1.000 N NA
 5872425 5872426 ECS88_4263 ECS88_4264 ptsG   TRUE 0.810 51.000 0.000 1.000 Y NA
 5872427 5872428 ECS88_4265 ECS88_4266     FALSE 0.313 201.000 0.000 0.042 Y NA
 5872428 5872429 ECS88_4266 ECS88_4267     FALSE 0.185 78.000 0.000 1.000 N NA
 5872429 5872430 ECS88_4267 ECS88_4268     TRUE 0.844 26.000 0.154 NA   NA
 5872430 5872431 ECS88_4268 ECS88_4269     TRUE 0.969 17.000 0.400 NA   NA
 5872431 5872432 ECS88_4269 ECS88_4270     FALSE 0.313 -94.000 0.059 NA   NA
 5872432 5872433 ECS88_4270 ECS88_4271     TRUE 0.697 -54.000 0.176 NA   NA
 5872433 5872434 ECS88_4271 ECS88_4272     FALSE 0.284 95.000 0.095 NA   NA
 5872434 5872435 ECS88_4272 ECS88_4273     TRUE 0.913 6.000 0.048 NA   NA
 5872435 5872436 ECS88_4273 ECS88_4274   ysgA FALSE 0.113 257.000 0.000 1.000 Y NA
 5872438 5872439 ECS88_4276 ECS88_4277     TRUE 0.974 13.000 0.333 NA   NA
 5872439 5872440 ECS88_4277 ECS88_4278     TRUE 0.865 14.000 0.000 NA   NA
 5872440 5872441 ECS88_4278 ECS88_4279     TRUE 0.755 25.000 0.000 1.000   NA
 5872441 5872442 ECS88_4279 ECS88_4280     TRUE 0.761 -85.000 0.000 1.000 Y NA
 5872442 5872443 ECS88_4280 ECS88_4281     TRUE 0.648 24.000 0.000 1.000 N NA
 5872444 5872445 ECS88_4282 ECS88_4283 rmuC ubiE FALSE 0.187 95.000 0.047 NA   NA
 5872445 5872446 ECS88_4283 ECS88_4284 ubiE yigP TRUE 0.938 14.000 0.145 1.000   NA
 5872446 5872447 ECS88_4284 ECS88_4285 yigP ubiB TRUE 0.991 -3.000 0.432 1.000   NA
 5872447 5872448 ECS88_4285 ECS88_4286 ubiB tatA FALSE 0.224 79.000 0.032 1.000   NA
 5872448 5872449 ECS88_4286 ECS88_4287 tatA tatB TRUE 0.994 4.000 0.188 1.000 Y NA
 5872449 5872450 ECS88_4287 ECS88_4288 tatB tatC TRUE 0.996 3.000 0.333 NA Y NA
 5872450 5872451 ECS88_4288 ECS88_4289 tatC tatD TRUE 0.551 42.000 0.121 NA N NA
 5872453 5872454 ECS88_4291 ECS88_4292 ubiD fre TRUE 0.853 46.000 0.090 NA Y NA
 5872455 5872456 ECS88_4293 ECS88_4294 fadA fadB TRUE 0.998 10.000 0.607 1.000 Y NA
 5872457 5872458 ECS88_4295 ECS88_4296 pepQ yigZ TRUE 0.974 0.000 0.127 1.000   NA
 5872458 5872459 ECS88_4296 ECS88_4297 yigZ trkH TRUE 0.809 39.000 0.202 1.000   NA
 5872459 5872460 ECS88_4297 ECS88_4298 trkH hemG TRUE 0.981 12.000 0.455 1.000 N NA
 5872460 5872461 ECS88_4298 ECS88_16S_5 hemG   FALSE 0.008 375.000 0.000 NA   NA
 5872461 5872462 ECS88_16S_5 ECS88_tRNA44     FALSE 0.283 69.000 0.000 NA   NA
 5872462 5872463 ECS88_tRNA44 ECS88_tRNA45     TRUE 0.506 43.000 0.000 NA   NA
 5872463 5872464 ECS88_tRNA45 ECS88_23S_5     FALSE 0.056 184.000 0.000 NA   NA
 5872464 5872465 ECS88_23S_5 ECS88_5S_6     FALSE 0.216 94.000 0.000 NA   NA
 5872466 5872467 ECS88_4306 ECS88_4307 mobB mobA TRUE 0.994 -3.000 0.064 0.002 Y NA
 5872468 5872469 ECS88_4308 ECS88_4309 yihD yihE FALSE 0.354 77.000 0.106 NA   NA
 5872469 5872470 ECS88_4309 ECS88_4310 yihE dsbA TRUE 0.885 17.000 0.111 NA   NA
 5872470 5872471 ECS88_4310 ECS88_4311 dsbA yihF FALSE 0.087 155.000 0.000 NA   NA
 5872473 5872474 ECS88_4313 ECS88_misc_RNA_79 polA spf FALSE 0.101 148.000 0.000 NA   NA
 5872476 5872477 ECS88_misc_RNA_80 ECS88_4315 csrC yihI FALSE 0.293 67.000 0.000 NA   NA
 5872477 5872478 ECS88_4315 ECS88_4316 yihI hemN FALSE 0.078 189.000 0.107 NA   NA
 5872479 5872480 ECS88_4318 ECS88_4319 glnG glnL TRUE 0.998 12.000 0.587 0.058 Y NA
 5872480 5872481 ECS88_4319 ECS88_4320 glnL glnA FALSE 0.039 174.000 0.053 1.000 N NA
 5872483 5872484 ECS88_4322 ECS88_4323     TRUE 0.988 40.000 1.000 1.000 Y NA
 5872485 5872486 ECS88_4324 ECS88_4325     TRUE 0.781 25.000 0.125 1.000 N NA
 5872486 5872487 ECS88_4325 ECS88_4326     TRUE 0.797 33.000 0.188 1.000 N NA
 5872487 5872488 ECS88_4326 ECS88_4327     FALSE 0.248 70.000 0.079 1.000 N NA
 5872488 5872489 ECS88_4327 ECS88_4328     FALSE 0.406 99.000 0.053 0.040   NA
 5872489 5872490 ECS88_4328 ECS88_4329     TRUE 0.804 -67.000 0.333 1.000   NA
 5872490 5872491 ECS88_4329 ECS88_4330   yihX FALSE 0.131 141.000 0.000 1.000   NA
 5872491 5872492 ECS88_4330 ECS88_4331 yihX rbn TRUE 0.885 -6.000 0.000 1.000   NA
 5872492 5872493 ECS88_4331 ECS88_4332 rbn dtd TRUE 0.944 -3.000 0.069 1.000   NA
 5872493 5872494 ECS88_4332 ECS88_4333 dtd yiiD TRUE 0.941 -3.000 0.065 1.000   NA
 5872496 5872497 ECS88_4335 ECS88_4336     TRUE 0.986 1.000 0.280 NA   NA
 5872497 5872498 ECS88_4336 ECS88_4337     FALSE 0.009 359.000 0.000 NA   NA
 5872498 5872499 ECS88_4337 ECS88_4338   yiiE FALSE 0.007 396.000 0.000 NA   NA
 5872500 5872501 ECS88_4339 ECS88_4340 fdhE fdoI TRUE 0.960 -3.000 0.182 NA N NA
 5872501 5872502 ECS88_4340 ECS88_4341 fdoI fdoH TRUE 0.999 -3.000 0.944 0.001 Y NA
 5872502 5872503 ECS88_4341 ECS88_4342 fdoH fdoG TRUE 0.999 13.000 0.833 0.001 Y NA
 5872504 5872505 ECS88_4344 ECS88_4345 fdhD yiiG FALSE 0.234 88.000 0.000 NA   NA
 5872505 5872506 ECS88_4345 ECS88_4346 yiiG yiiG FALSE 0.363 57.000 0.000 NA   NA
 5872506 5872507 ECS88_4346 ECS88_4347 yiiG   FALSE 0.009 354.000 0.000 NA   NA
 5872508 5872509 ECS88_4348 ECS88_4349 yiiL rhaD TRUE 0.945 10.000 0.112 NA   NA
 5872509 5872510 ECS88_4349 ECS88_4350 rhaD rhaA FALSE 0.203 277.000 0.247 1.000 Y NA
 5872510 5872511 ECS88_4350 ECS88_4351 rhaA rhaB TRUE 0.997 -3.000 0.387 1.000 Y NA
 5872512 5872513 ECS88_4353 ECS88_4355 rhaS rhaR TRUE 0.542 -37.000 0.000 NA   NA
 5872513 5872514 ECS88_4355 ECS88_4356 rhaR rhaR TRUE 0.509 -43.000 0.000 NA   NA
 5872516 5872517 ECS88_4358 ECS88_4359 sodA kdgT FALSE 0.024 260.000 0.000 1.000   NA
 5872517 5872518 ECS88_4359 ECS88_4360 kdgT yiiM FALSE 0.114 149.000 0.000 1.000   NA
 5872519 5872520 ECS88_4361 ECS88_4362 cpxA cpxR TRUE 0.999 -3.000 0.791 1.000 Y NA
 5872521 5872522 ECS88_4364 ECS88_4365 cpxP fieF FALSE 0.332 149.000 0.031 NA Y NA
 5872522 5872523 ECS88_4365 ECS88_4366 fieF pfkA FALSE 0.028 181.000 0.040 1.000 N NA
 5872523 5872524 ECS88_4366 ECS88_4367 pfkA sbp FALSE 0.006 320.000 0.049 1.000 N NA
 5872524 5872525 ECS88_4367 ECS88_4368 sbp cdh FALSE 0.140 107.000 0.000 1.000 N NA
 5872526 5872527 ECS88_4369 ECS88_4370 tpiA yiiQ FALSE 0.192 108.000 0.058 NA   NA
 5872528 5872529 ECS88_4371 ECS88_4372 yiiR yiiS FALSE 0.034 212.000 0.000 NA   NA
 5872529 5872530 ECS88_4372 ECS88_4373 yiiS yiiT TRUE 0.697 27.000 0.000 NA   NA
 5872531 5872532 ECS88_4374 ECS88_4375 fpr glpX FALSE 0.252 97.000 0.117 1.000 N NA
 5872532 5872533 ECS88_4375 ECS88_4376 glpX glpK FALSE 0.025 171.000 0.025 1.000 N NA
 5872533 5872534 ECS88_4376 ECS88_4377 glpK glpF TRUE 0.427 23.000 0.004 1.000 N NA
 5872536 5872537 ECS88_4379 ECS88_4380 rraA menA TRUE 0.723 93.000 0.158 NA Y NA
 5872537 5872538 ECS88_4380 ECS88_4381 menA hslU FALSE 0.189 67.000 0.051 1.000 N NA
 5872538 5872539 ECS88_4381 ECS88_4382 hslU hslV TRUE 0.998 10.000 0.752 1.000 Y NA
 5872539 5872540 ECS88_4382 ECS88_4383 hslV ftsN FALSE 0.240 93.000 0.122 NA N NA
 5872540 5872541 ECS88_4383 ECS88_4384 ftsN cytR TRUE 0.428 92.000 0.245 NA N NA
 5872541 5872542 ECS88_4384 ECS88_4385 cytR priA FALSE 0.026 156.000 0.013 1.000 N NA
 5872544 5872545 ECS88_4387 ECS88_4388 yiiX metJ FALSE 0.338 60.000 0.000 NA   NA
 5872546 5872547 ECS88_4390 ECS88_4391 metB metL TRUE 0.997 3.000 0.428 1.000 Y NA
 5872548 5872549 ECS88_4392 ECS88_4393 tsx   FALSE 0.187 77.000 0.000 1.000 N NA
 5872549 5872550 ECS88_4393 ECS88_4394     TRUE 0.958 35.000 0.000 0.001 Y NA
 5872550 5872551 ECS88_4394 ECS88_4395     FALSE 0.031 230.000 0.000 1.000   NA
 5872552 5872553 ECS88_4396 ECS88_4397   metF FALSE 0.005 382.000 0.000 1.000 N NA
 5872553 5872554 ECS88_4397 ECS88_4398 metF katG FALSE 0.003 329.000 0.010 1.000 N NA
 5872554 5872555 ECS88_4398 ECS88_4399 katG yijE FALSE 0.161 94.000 0.012 1.000   NA
 5872556 5872557 ECS88_4400 ECS88_4401 yijF gldA FALSE 0.017 276.000 0.000 NA   NA
 5872557 5872558 ECS88_4401 ECS88_4402 gldA fsaB TRUE 0.989 11.000 0.600 1.000 N NA
 5872558 5872559 ECS88_4402 ECS88_4403 fsaB ptsA TRUE 0.980 12.000 0.000 1.000 Y NA
 5872560 5872561 ECS88_4404 ECS88_4405 frwC frwB TRUE 0.996 15.000 0.400 0.011 Y NA
 5872561 5872562 ECS88_4405 ECS88_4406 frwB pflD TRUE 0.706 51.000 0.280 1.000 N NA
 5872562 5872563 ECS88_4406 ECS88_4407 pflD pflC TRUE 0.918 -34.000 0.312 0.003 N NA
 5872563 5872564 ECS88_4407 ECS88_4408 pflC frwD TRUE 0.966 2.000 0.156 1.000 N NA
 5872565 5872566 ECS88_4409 ECS88_4410 yijO yijP FALSE 0.059 226.000 0.130 1.000   NA
 5872566 5872567 ECS88_4410 ECS88_4411 yijP ppc FALSE 0.067 183.000 0.000 1.000   NA
 5872567 5872568 ECS88_4411 ECS88_4412 ppc argE FALSE 0.008 302.000 0.053 1.000 N NA
 5872569 5872570 ECS88_4413 ECS88_4414 argC argB TRUE 0.994 11.000 0.097 0.001 Y NA
 5872570 5872571 ECS88_4414 ECS88_4415 argB argH TRUE 0.698 61.000 0.017 1.000 Y NA
 5872571 5872572 ECS88_4415 ECS88_4416 argH rspA FALSE 0.004 498.000 0.000 1.000 N NA
 5872572 5872573 ECS88_4416 ECS88_4417 rspA   FALSE 0.177 67.000 0.000 NA N NA
 5872577 5872578 ECS88_4420 ECS88_4421     TRUE 0.548 43.000 0.000 1.000   NA
 5872578 5872579 ECS88_4421 ECS88_4422   fabR FALSE 0.326 50.000 0.000 1.000 N NA
 5872579 5872580 ECS88_4422 ECS88_4423 fabR yijD TRUE 0.981 0.000 0.194 NA   NA
 5872582 5872583 ECS88_misc_RNA_82 ECS88_4425   btuB FALSE 0.307 65.000 0.000 NA   NA
 5872583 5872584 ECS88_4425 ECS88_4426 btuB murI FALSE 0.227 -55.000 0.025 1.000 N NA
 5872584 5872585 ECS88_4426 ECS88_16S_6 murI   FALSE 0.008 374.000 0.000 NA   NA
 5872585 5872586 ECS88_16S_6 ECS88_tRNA46     FALSE 0.239 86.000 0.000 NA   NA
 5872586 5872587 ECS88_tRNA46 ECS88_23S_6     FALSE 0.046 194.000 0.000 NA   NA
 5872587 5872588 ECS88_23S_6 ECS88_5S_7     FALSE 0.214 95.000 0.000 NA   NA
 5872588 5872589 ECS88_5S_7 ECS88_4436   murB FALSE 0.128 135.000 0.000 NA   NA
 5872589 5872590 ECS88_4436 ECS88_4437 murB birA TRUE 0.970 -3.000 0.211 1.000 N NA
 5872592 5872593 ECS88_tRNA47 ECS88_tRNA48     TRUE 0.918 9.000 0.000 NA   NA
 5872593 5872594 ECS88_tRNA48 ECS88_tRNA49     FALSE 0.175 117.000 0.000 NA   NA
 5872594 5872595 ECS88_tRNA49 ECS88_tRNA50     TRUE 0.923 7.000 0.000 NA   NA
 5872595 5872596 ECS88_tRNA50 ECS88_4441   tufB FALSE 0.181 115.000 0.000 NA   NA
 5872596 5872597 ECS88_4441 ECS88_4442 tufB secE FALSE 0.007 230.000 0.009 1.000 N NA
 5872597 5872598 ECS88_4442 ECS88_4443 secE nusG TRUE 0.996 2.000 0.843 1.000 N NA
 5872598 5872599 ECS88_4443 ECS88_4444 nusG rplK TRUE 0.508 159.000 0.681 1.000 N NA
 5872599 5872600 ECS88_4444 ECS88_4445 rplK rplA TRUE 0.999 4.000 0.838 0.011 Y NA
 5872600 5872601 ECS88_4445 ECS88_4446 rplA rplJ FALSE 0.324 292.000 0.302 0.011 Y NA
 5872601 5872602 ECS88_4446 ECS88_4447 rplJ rplL TRUE 0.979 67.000 0.884 0.008 Y NA
 5872602 5872603 ECS88_4447 ECS88_4448 rplL rpoB FALSE 0.043 320.000 0.223 1.000   NA
 5872603 5872604 ECS88_4448 ECS88_4449 rpoB rpoC TRUE 0.939 77.000 0.851 0.000   NA
 5872605 5872606 ECS88_4450 ECS88_4451 thiH thiG TRUE 0.998 -3.000 0.277 0.003 Y NA
 5872606 5872607 ECS88_4451 ECS88_4452 thiG thiS TRUE 0.992 2.000 0.087 1.000 Y NA
 5872607 5872608 ECS88_4452 ECS88_4453 thiS thiF TRUE 0.988 -16.000 0.548 1.000 Y NA
 5872608 5872609 ECS88_4453 ECS88_4454 thiF thiE TRUE 0.987 -7.000 0.242 1.000 Y NA
 5872609 5872610 ECS88_4454 ECS88_4455 thiE thiC TRUE 0.996 0.000 0.063 0.003 Y NA
 5872610 5872611 ECS88_4455 ECS88_misc_RNA_83 thiC   FALSE 0.250 81.000 0.000 NA   NA
 5872611 5872612 ECS88_misc_RNA_83 ECS88_4456   rsd FALSE 0.404 52.000 0.000 NA   NA
 5872613 5872614 ECS88_4457 ECS88_4458 nudC hemE FALSE 0.363 40.000 0.040 1.000 N NA
 5872614 5872615 ECS88_4458 ECS88_4459 hemE nfi TRUE 0.795 10.000 0.028 1.000 N NA
 5872615 5872616 ECS88_4459 ECS88_4460 nfi yjaG TRUE 0.577 43.000 0.086 NA   NA
 5872616 5872617 ECS88_4460 ECS88_4461 yjaG hupA FALSE 0.241 187.000 0.355 NA   NA
 5872617 5872618 ECS88_4461 ECS88_4462 hupA yjaH TRUE 0.978 13.000 0.375 NA   NA
 5872620 5872621 ECS88_4464 ECS88_4465 zraS zraR TRUE 0.998 -3.000 0.500 0.068 Y NA
 5872622 5872623 ECS88_4466 ECS88_4467 purD purH TRUE 0.992 12.000 0.238 1.000 Y NA
 5872624 5872625 ECS88_16S_7 ECS88_tRNA51     FALSE 0.239 86.000 0.000 NA   NA
 5872625 5872626 ECS88_tRNA51 ECS88_23S_7     FALSE 0.046 194.000 0.000 NA   NA
 5872626 5872627 ECS88_23S_7 ECS88_5S_8     FALSE 0.216 94.000 0.000 NA   NA
 5872627 5872628 ECS88_5S_8 ECS88_4476   yjaA FALSE 0.263 75.000 0.000 NA   NA
 5872630 5872631 ECS88_4478 ECS88_4479 metA aceB FALSE 0.012 269.000 0.000 1.000 N NA
 5872631 5872632 ECS88_4479 ECS88_4480 aceB aceA TRUE 0.963 30.000 0.043 0.001 Y NA
 5872632 5872633 ECS88_4480 ECS88_4481 aceA aceK FALSE 0.336 49.000 0.000 1.000 N NA
 5872635 5872636 ECS88_4483 ECS88_4484 metH   FALSE 0.385 54.000 0.000 NA   NA
 5872636 5872637 ECS88_4484 ECS88_4485     TRUE 0.506 43.000 0.000 NA   NA
 5872637 5872638 ECS88_4485 ECS88_4486   yjbB FALSE 0.069 171.000 0.000 NA   NA
 5872639 5872640 ECS88_4487 ECS88_4488 pepE   FALSE 0.047 382.000 0.000 1.000 Y NA
 5872640 5872641 ECS88_4488 ECS88_4489     TRUE 0.809 40.000 0.286 1.000 N NA
 5872641 5872642 ECS88_4489 ECS88_4490     TRUE 0.986 -19.000 0.333 0.015 Y NA
 5872642 5872643 ECS88_4490 ECS88_4491     TRUE 0.947 66.000 0.400 0.015 Y NA
 5872643 5872644 ECS88_4491 ECS88_4492     TRUE 0.997 0.000 0.167 0.010 Y NA
 5872644 5872645 ECS88_4492 ECS88_4493     TRUE 0.905 10.000 0.083 1.000 N NA
 5872645 5872646 ECS88_4493 ECS88_4494     FALSE 0.278 70.000 0.091 1.000 N NA
 5872648 5872649 ECS88_4496 ECS88_4497 yjbD lysC FALSE 0.022 253.000 0.000 NA   NA
 5872649 5872650 ECS88_4497 ECS88_misc_RNA_84 lysC   FALSE 0.221 92.000 0.000 NA   NA
 5872653 5872654 ECS88_4500 ECS88_4501 yjbF yjbG TRUE 0.996 -3.000 1.000 NA   NA
 5872654 5872655 ECS88_4501 ECS88_4502 yjbG yjbH TRUE 0.973 0.000 0.140 NA   NA
 5872657 5872658 ECS88_4504 ECS88_4505   yjbA TRUE 0.928 -3.000 0.000 NA   NA
 5872659 5872660 ECS88_4506 ECS88_4507 malG malF TRUE 0.998 15.000 0.814 0.039 Y NA
 5872660 5872661 ECS88_4507 ECS88_4508 malF malE FALSE 0.369 154.000 0.000 1.000 Y NA
 5872662 5872663 ECS88_4509 ECS88_4510 malK lamB TRUE 0.834 72.000 0.111 0.051 Y NA
 5872663 5872664 ECS88_4510 ECS88_4511 lamB malM FALSE 0.026 323.000 0.143 1.000   NA
 5872664 5872665 ECS88_4511 ECS88_4512 malM ubiC FALSE 0.039 179.000 0.025 NA   NA
 5872665 5872666 ECS88_4512 ECS88_4513 ubiC ubiA TRUE 0.990 13.000 0.248 NA Y NA
 5872668 5872669 ECS88_4515 ECS88_4517 dgkA lexA FALSE 0.266 110.000 0.141 1.000 N NA
 5872669 5872670 ECS88_4517 ECS88_4518 lexA dinF TRUE 0.625 19.000 0.033 1.000 N NA
 5872670 5872671 ECS88_4518 ECS88_4519 dinF yjbJ FALSE 0.115 116.000 0.021 NA   NA
 5872673 5872674 ECS88_4521 ECS88_4522 yjbN yjbO FALSE 0.376 -76.000 0.000 NA   NA
 5872675 5872676 ECS88_4523 ECS88_4524 qor   TRUE 0.602 106.000 0.000 1.000 Y NA
 5872676 5872677 ECS88_4524 ECS88_4525     FALSE 0.193 -127.000 0.000 1.000 N NA
 5872677 5872678 ECS88_4525 ECS88_4526     FALSE 0.161 91.000 0.000 1.000 N NA
 5872678 5872679 ECS88_4526 ECS88_4527     TRUE 0.982 -7.000 0.000 0.043 Y NA
 5872680 5872681 ECS88_4528 ECS88_4529   dnaB FALSE 0.195 73.000 0.000 1.000 N NA
 5872681 5872682 ECS88_4529 ECS88_4530 dnaB alr TRUE 0.720 53.000 0.317 1.000 N NA
 5872682 5872683 ECS88_4530 ECS88_4531 alr   TRUE 0.662 23.000 0.000 1.000 N NA
 5872683 5872684 ECS88_4531 ECS88_4532     TRUE 0.933 -27.000 0.143 NA Y NA
 5872684 5872685 ECS88_4532 ECS88_4533   tyrB FALSE 0.146 82.000 0.000 NA N NA
 5872685 5872686 ECS88_4533 ECS88_4534 tyrB sucA FALSE 0.058 107.000 0.003 1.000 N NA
 5872686 5872687 ECS88_4534 ECS88_4535 sucA sucB TRUE 0.988 33.000 0.667 1.000 Y NA
 5872687 5872688 ECS88_4535 ECS88_4536 sucB   TRUE 0.992 12.000 0.253 1.000 Y NA
 5872688 5872689 ECS88_4536 ECS88_4537   sucC TRUE 0.954 22.000 0.069 1.000 Y NA
 5872689 5872690 ECS88_4537 ECS88_4538 sucC sucD TRUE 0.999 13.000 0.806 0.001 Y NA
 5872690 5872691 ECS88_4538 ECS88_4539 sucD   FALSE 0.025 206.000 0.000 1.000 N NA
 5872691 5872692 ECS88_4539 ECS88_4540     FALSE 0.387 -126.000 0.156 1.000 N NA
 5872693 5872694 ECS88_4541 ECS88_4542 dctD dctD TRUE 0.586 37.000 0.000 NA   NA
 5872694 5872695 ECS88_4542 ECS88_4543 dctD   TRUE 0.840 -7.000 0.000 NA   NA
 5872696 5872697 ECS88_4544 ECS88_4545 aphA yjbQ FALSE 0.111 111.000 0.009 NA   NA
 5872697 5872698 ECS88_4545 ECS88_4546 yjbQ yjbR TRUE 0.889 4.000 0.018 NA   NA
 5872706 5872707 ECS88_4554 ECS88_4555 yjcD yjcE FALSE 0.182 151.000 0.130 1.000   NA
 5872709 5872710 ECS88_4558 ECS88_4559     TRUE 0.990 -7.000 0.840 1.000   NA
 5872711 5872712 ECS88_4560 ECS88_4561 actP yjcH TRUE 0.995 -3.000 0.733 NA   NA
 5872712 5872713 ECS88_4561 ECS88_4562 yjcH acs FALSE 0.031 292.000 0.147 NA   NA
 5872714 5872715 ECS88_4563 ECS88_4564 nrfA nrfB TRUE 0.813 45.000 0.083 0.001   NA
 5872715 5872716 ECS88_4564 ECS88_4565 nrfB nrfC TRUE 0.979 -3.000 0.049 0.001   NA
 5872716 5872717 ECS88_4565 ECS88_4566 nrfC nrfD TRUE 0.998 -3.000 0.927 0.001 N NA
 5872717 5872718 ECS88_4566 ECS88_4567 nrfD nrfE TRUE 0.646 80.000 0.400 1.000 N NA
 5872718 5872719 ECS88_4567 ECS88_4568 nrfE nrfF TRUE 0.984 -7.000 0.214 NA Y NA
 5872719 5872720 ECS88_4568 ECS88_4569 nrfF nrfG TRUE 0.997 -3.000 0.464 NA Y NA
 5872720 5872721 ECS88_4569 ECS88_4570 nrfG gltP FALSE 0.006 343.000 0.000 1.000 N NA
 5872722 5872723 ECS88_4571 ECS88_4572 yjcO   FALSE 0.215 111.000 0.000 1.000   NA
 5872723 5872724 ECS88_4572 ECS88_4573     TRUE 0.994 -13.000 0.550 0.012 Y NA
 5872724 5872725 ECS88_4573 ECS88_4574     TRUE 0.931 -67.000 0.324 1.000 Y NA
 5872725 5872726 ECS88_4574 ECS88_4575     TRUE 0.999 0.000 0.441 0.039 Y NA
 5872726 5872727 ECS88_4575 ECS88_4576     TRUE 0.998 7.000 0.400 0.039 Y NA
 5872727 5872728 ECS88_4576 ECS88_4577   fdhF FALSE 0.010 375.000 0.000 1.000   NA
 5872728 5872729 ECS88_4577 ECS88_4579 fdhF yjcP FALSE 0.050 198.000 0.000 1.000   NA
 5872729 5872730 ECS88_4579 ECS88_4580 yjcP yjcQ TRUE 0.994 -3.000 0.625 NA   NA
 5872730 5872731 ECS88_4580 ECS88_4581 yjcQ yjcR TRUE 0.997 0.000 1.000 NA   NA
 5872731 5872732 ECS88_4581 ECS88_4582 yjcR   TRUE 0.980 19.000 0.625 NA   NA
 5872732 5872733 ECS88_4582 ECS88_4583   yjcS FALSE 0.081 160.000 0.000 NA   NA
 5872733 5872734 ECS88_4583 ECS88_4584 yjcS alsK FALSE 0.012 275.000 0.000 1.000 N NA
 5872734 5872735 ECS88_4584 ECS88_4585 alsK alsE TRUE 0.944 -16.000 0.081 1.000 Y NA
 5872735 5872736 ECS88_4585 ECS88_4586 alsE alsC TRUE 0.903 11.000 0.000 NA   NA
 5872736 5872737 ECS88_4586 ECS88_4587 alsC alsC TRUE 0.685 28.000 0.000 NA   NA
 5872737 5872738 ECS88_4587 ECS88_4588 alsC alsA TRUE 0.664 -21.000 0.000 NA   NA
 5872738 5872739 ECS88_4588 ECS88_4589 alsA alsB TRUE 0.494 127.000 0.000 NA Y NA
 5872739 5872740 ECS88_4589 ECS88_4590 alsB rpiR TRUE 0.588 59.000 0.250 NA N NA
 5872741 5872742 ECS88_4591 ECS88_4592 rpiB yjdP TRUE 0.420 69.000 0.125 NA   NA
 5872743 5872744 ECS88_4593 ECS88_4594 phnP phnO TRUE 0.951 2.000 0.000 1.000   NA
 5872744 5872745 ECS88_4594 ECS88_4595 phnO phnN TRUE 0.602 -13.000 0.000 NA N NA
 5872745 5872746 ECS88_4595 ECS88_4596 phnN phnM TRUE 0.996 0.000 0.235 NA Y NA
 5872746 5872747 ECS88_4596 ECS88_4597 phnM phnL TRUE 0.996 -3.000 0.320 1.000 Y NA
 5872747 5872748 ECS88_4597 ECS88_4598 phnL phnK TRUE 0.961 111.000 0.859 0.012 Y NA
 5872748 5872749 ECS88_4598 ECS88_4599 phnK phnJ TRUE 0.999 -3.000 0.883 1.000 Y NA
 5872749 5872750 ECS88_4599 ECS88_4600 phnJ phnI TRUE 0.997 -7.000 0.880 1.000 Y NA
 5872750 5872751 ECS88_4600 ECS88_4601 phnI phnH TRUE 1.000 0.000 0.960 0.001 Y NA
 5872751 5872752 ECS88_4601 ECS88_4602 phnH phnG TRUE 0.999 -3.000 0.967 0.001 Y NA
 5872752 5872753 ECS88_4602 ECS88_4603 phnG phnF TRUE 0.995 1.000 0.691 1.000 N NA
 5872753 5872754 ECS88_4603 ECS88_4604 phnF phnE TRUE 0.861 21.000 0.158 1.000 N NA
 5872754 5872755 ECS88_4604 ECS88_4605 phnE phnD TRUE 0.979 43.000 0.330 0.000 Y NA
 5872755 5872756 ECS88_4605 ECS88_4606 phnD phnC TRUE 0.992 25.000 0.337 0.001 Y NA
 5872756 5872757 ECS88_4606 ECS88_4608 phnC phnB FALSE 0.153 133.000 0.074 NA   NA
 5872757 5872758 ECS88_4608 ECS88_4609 phnB   FALSE 0.047 160.000 0.013 NA   NA
 5872759 5872760 ECS88_4610 ECS88_4611 yjdA yjcZ TRUE 0.996 -3.000 0.857 NA   NA
 5872760 5872761 ECS88_4611 ECS88_4612 yjcZ proP FALSE 0.019 264.000 0.000 NA   NA
 5872762 5872763 ECS88_4614 ECS88_4615 basS basR TRUE 0.990 10.000 0.143 1.000 Y NA
 5872763 5872764 ECS88_4615 ECS88_4616 basR eptA TRUE 0.956 -3.000 0.095 1.000   NA
 5872764 5872765 ECS88_4616 ECS88_4617 eptA adiC FALSE 0.232 104.000 0.000 1.000   NA
 5872765 5872766 ECS88_4617 ECS88_4618 adiC adiY FALSE 0.209 137.000 0.167 1.000 N NA
 5872766 5872767 ECS88_4618 ECS88_4619 adiY adiA FALSE 0.007 336.000 0.000 1.000 N NA
 5872767 5872768 ECS88_4619 ECS88_4620 adiA melR FALSE 0.030 196.000 0.000 1.000 N NA
 5872770 5872771 ECS88_4622 ECS88_4623 yjdF fumB FALSE 0.162 123.000 0.000 NA   NA
 5872771 5872772 ECS88_4623 ECS88_4624 fumB dcuB FALSE 0.289 78.000 0.000 1.000   NA
 5872772 5872773 ECS88_4624 ECS88_4626 dcuB dcuR FALSE 0.006 571.000 0.000 1.000   NA
 5872773 5872774 ECS88_4626 ECS88_4627 dcuR dcuS TRUE 0.993 -3.000 0.086 0.057 Y NA
 5872775 5872776 ECS88_4630 ECS88_4631 yjdI yjdJ TRUE 0.953 12.000 0.168 NA   NA
 5872776 5872777 ECS88_4631 ECS88_4632 yjdJ yjdK FALSE 0.027 228.000 0.000 NA   NA
 5872778 5872779 ECS88_4633 ECS88_4634 lysU yjdL FALSE 0.016 237.000 0.000 1.000 N NA
 5872779 5872780 ECS88_4634 ECS88_4635 yjdL cadA TRUE 0.760 59.000 0.000 1.000 Y NA
 5872780 5872781 ECS88_4635 ECS88_4636 cadA cadB TRUE 0.670 80.000 0.000 1.000 Y NA
 5872781 5872782 ECS88_4636 ECS88_4637 cadB cadC FALSE 0.006 366.000 0.000 1.000 N NA
 5872784 5872785 ECS88_4639 ECS88_4640   yeeW FALSE 0.242 85.000 0.000 NA   NA
 5872785 5872786 ECS88_4640 ECS88_4641 yeeW yeeV TRUE 0.928 -3.000 0.000 NA   NA
 5872786 5872787 ECS88_4641 ECS88_4642 yeeV yeeU FALSE 0.231 89.000 0.000 NA   NA
 5872787 5872788 ECS88_4642 ECS88_4643 yeeU yeeT FALSE 0.252 80.000 0.000 NA   NA
 5872788 5872789 ECS88_4643 ECS88_4644 yeeT yeeS FALSE 0.236 87.000 0.000 NA   NA
 5872789 5872790 ECS88_4644 ECS88_4645 yeeS   TRUE 0.482 45.000 0.000 NA   NA
 5872790 5872791 ECS88_4645 ECS88_4646     FALSE 0.046 194.000 0.000 NA   NA
 5872791 5872792 ECS88_4646 ECS88_4647     FALSE 0.228 90.000 0.000 NA   NA
 5872792 5872793 ECS88_4647 ECS88_4648     TRUE 0.925 6.000 0.000 NA   NA
 5872793 5872794 ECS88_4648 ECS88_4649     TRUE 0.506 43.000 0.000 NA   NA
 5872794 5872795 ECS88_4649 ECS88_4650     FALSE 0.040 203.000 0.000 NA   NA
 5872796 5872797 ECS88_4651 ECS88_4652     FALSE 0.003 1453.000 0.000 NA   NA
 5872797 5872798 ECS88_4652 ECS88_4653     FALSE 0.083 158.000 0.000 NA   NA
 5872798 5872799 ECS88_4653 ECS88_4654     FALSE 0.283 69.000 0.000 NA   NA
 5872800 5872801 ECS88_4655 ECS88_4656   insC TRUE 0.447 48.000 0.000 NA   NA
 5872802 5872803 ECS88_4657 ECS88_4658     FALSE 0.208 100.000 0.000 NA   NA
 5872803 5872804 ECS88_4658 ECS88_4659     FALSE 0.021 272.000 0.000 1.000   NA
 5872804 5872805 ECS88_4659 ECS88_4660     FALSE 0.278 -121.000 0.000 NA   NA
 5872806 5872807 ECS88_4661 ECS88_4662   metK FALSE 0.113 -51.000 0.003 NA N NA
 5872807 5872808 ECS88_4662 ECS88_4664 metK   FALSE 0.040 129.000 0.003 1.000 N NA
 5872808 5872809 ECS88_4664 ECS88_4665     TRUE 0.986 17.000 0.107 0.011 Y NA
 5872809 5872810 ECS88_4665 ECS88_misc_RNA_86     FALSE 0.019 267.000 0.000 NA   NA
 5872810 5872811 ECS88_misc_RNA_86 ECS88_4667     FALSE 0.034 212.000 0.000 NA   NA
 5872811 5872812 ECS88_4667 ECS88_4669     TRUE 0.902 28.000 0.000 0.000   NA
 5872812 5872813 ECS88_4669 ECS88_4670     FALSE 0.006 486.000 0.000 NA   NA
 5872813 5872814 ECS88_4670 ECS88_4671     FALSE 0.124 137.000 0.000 NA   NA
 5872814 5872815 ECS88_4671 ECS88_4672     TRUE 0.813 109.000 0.571 0.003 N NA
 5872815 5872816 ECS88_4672 ECS88_4673     FALSE 0.393 49.000 0.031 1.000   NA
 5872816 5872817 ECS88_4673 ECS88_4674     FALSE 0.169 -124.000 0.010 NA   NA
 5872817 5872818 ECS88_4674 ECS88_4675     TRUE 0.921 24.000 0.278 NA   NA
 5872818 5872819 ECS88_4675 ECS88_4676     FALSE 0.168 61.000 0.033 1.000 N NA
 5872819 5872820 ECS88_4676 ECS88_4677     TRUE 0.806 22.000 0.083 NA   NA
 5872820 5872821 ECS88_4677 ECS88_4678     FALSE 0.025 234.000 0.000 NA   NA
 5872821 5872822 ECS88_4678 ECS88_4680     FALSE 0.257 -82.000 0.024 NA   NA
 5872822 5872823 ECS88_4680 ECS88_4681     TRUE 0.686 28.000 0.061 NA   NA
 5872823 5872824 ECS88_4681 ECS88_4682     TRUE 0.952 12.000 0.167 NA   NA
 5872824 5872825 ECS88_4682 ECS88_4683     TRUE 0.831 -16.000 0.120 1.000   NA
 5872825 5872826 ECS88_4683 ECS88_4684     TRUE 0.487 55.000 0.160 NA N NA
 5872826 5872827 ECS88_4684 ECS88_4685     FALSE 0.066 140.000 0.062 NA N NA
 5872828 5872829 ECS88_4686 ECS88_4687     TRUE 0.986 21.000 1.000 NA   NA
 5872831 5872832 ECS88_4689 ECS88_4690     TRUE 0.825 17.000 0.000 NA   NA
 5872832 5872833 ECS88_4690 ECS88_4691     FALSE 0.271 72.000 0.000 NA   NA
 5872833 5872834 ECS88_4691 ECS88_4692     TRUE 0.865 14.000 0.000 NA   NA
 5872834 5872835 ECS88_4692 ECS88_4693     FALSE 0.159 124.000 0.000 NA   NA
 5872835 5872836 ECS88_4693 ECS88_4694     FALSE 0.104 132.000 0.036 NA   NA
 5872836 5872837 ECS88_4694 ECS88_4695     TRUE 0.992 0.000 0.400 NA   NA
 5872837 5872838 ECS88_4695 ECS88_4696     TRUE 0.949 -18.000 0.491 NA   NA
 5872838 5872839 ECS88_4696 ECS88_4697     TRUE 0.985 -3.000 0.330 NA   NA
 5872839 5872840 ECS88_4697 ECS88_4698     FALSE 0.029 222.000 0.000 NA   NA
 5872841 5872842 ECS88_4699 ECS88_4700     TRUE 0.938 8.000 0.083 NA   NA
 5872842 5872843 ECS88_4700 ECS88_4701     FALSE 0.128 135.000 0.000 NA   NA
 5872843 5872844 ECS88_4701 ECS88_4702     TRUE 0.777 21.000 0.000 NA   NA
 5872844 5872845 ECS88_4702 ECS88_4703     TRUE 0.857 57.000 0.000 0.044 Y NA
 5872845 5872846 ECS88_4703 ECS88_4704     TRUE 0.667 34.000 0.000 1.000   NA
 5872846 5872847 ECS88_4704 ECS88_4705     FALSE 0.009 363.000 0.000 NA   NA
 5872847 5872848 ECS88_4705 ECS88_4706     TRUE 0.603 36.000 0.000 NA   NA
 5872848 5872849 ECS88_4706 ECS88_4707     TRUE 0.995 27.000 0.667 0.006 Y NA
 5872850 5872851 ECS88_4708 ECS88_4709     TRUE 0.869 105.000 0.429 1.000 Y NA
 5872851 5872852 ECS88_4709 ECS88_4710     TRUE 0.903 75.000 0.429 1.000 Y NA
 5872852 5872853 ECS88_4710 ECS88_4711   insA FALSE 0.076 143.000 0.000 1.000 N NA
 5872853 5872854 ECS88_4711 ECS88_4712 insA insB TRUE 0.875 -81.000 0.000 0.006 Y NA
 5872855 5872856 ECS88_4713 ECS88_4714     FALSE 0.074 167.000 0.000 NA   NA
 5872856 5872857 ECS88_4714 ECS88_4715     FALSE 0.268 73.000 0.000 NA   NA
 5872857 5872858 ECS88_4715 ECS88_4716   insB TRUE 0.943 2.000 0.000 NA   NA
 5872858 5872859 ECS88_4716 ECS88_4717 insB insA TRUE 0.875 -81.000 0.000 0.006 Y NA
 5872859 5872860 ECS88_4717 ECS88_4719 insA   FALSE 0.006 530.000 0.000 1.000   NA
 5872860 5872861 ECS88_4719 ECS88_4720     FALSE 0.033 226.000 0.000 1.000   NA
 5872861 5872862 ECS88_4720 ECS88_tRNA59     FALSE 0.043 198.000 0.000 NA   NA
 5872862 5872863 ECS88_tRNA59 ECS88_4721   yjdC FALSE 0.198 107.000 0.000 NA   NA
 5872863 5872864 ECS88_4721 ECS88_4722 yjdC dipZ TRUE 0.836 37.000 0.217 1.000   NA
 5872864 5872865 ECS88_4722 ECS88_4723 dipZ cutA TRUE 0.642 -24.000 0.092 1.000 N NA
 5872865 5872866 ECS88_4723 ECS88_4724 cutA dcuA FALSE 0.126 116.000 0.005 1.000   NA
 5872866 5872867 ECS88_4724 ECS88_4725 dcuA aspA FALSE 0.129 118.000 0.015 1.000   NA
 5872870 5872871 ECS88_4728 ECS88_4729 groS groL TRUE 0.985 44.000 0.631 0.067 Y NA
 5872871 5872872 ECS88_4729 ECS88_4730 groL yjeI FALSE 0.123 138.000 0.062 NA   NA
 5872873 5872874 ECS88_4731 ECS88_4732 yjeJ yjeK FALSE 0.025 235.000 0.000 NA   NA
 5872875 5872876 ECS88_4733 ECS88_4734 efp ecnA FALSE 0.312 52.000 0.007 1.000   NA
 5872876 5872877 ECS88_4734 ECS88_4735 ecnA ecnB TRUE 0.686 111.000 0.212 0.000   NA
 5872877 5872878 ECS88_4735 ECS88_4736 ecnB sugE FALSE 0.085 176.000 0.074 1.000   NA
 5872879 5872880 ECS88_4737 ECS88_4738 blc ampC FALSE 0.091 89.000 0.022 1.000 N NA
 5872880 5872881 ECS88_4738 ECS88_4739 ampC frdD FALSE 0.136 63.000 0.022 1.000 N NA
 5872881 5872882 ECS88_4739 ECS88_4740 frdD frdC TRUE 0.999 11.000 0.787 0.002 Y NA
 5872882 5872883 ECS88_4740 ECS88_4741 frdC frdB TRUE 0.998 11.000 0.454 0.002 Y NA
 5872883 5872884 ECS88_4741 ECS88_4742 frdB frdA TRUE 0.997 -7.000 0.470 0.002 Y NA
 5872885 5872886 ECS88_4743 ECS88_4744 poxA yjeM FALSE 0.008 219.000 0.009 1.000 N NA
 5872886 5872887 ECS88_4744 ECS88_4745 yjeM yjeN TRUE 0.758 63.000 0.400 NA   NA
 5872887 5872888 ECS88_4745 ECS88_4746 yjeN yjeO TRUE 0.928 -3.000 0.000 NA   NA
 5872889 5872890 ECS88_4747 ECS88_4748 yjeP psd TRUE 0.839 22.000 0.148 1.000 N NA
 5872890 5872891 ECS88_4748 ECS88_4749 psd rsgA FALSE 0.307 97.000 0.095 1.000   NA
 5872892 5872893 ECS88_4750 ECS88_tRNA52 orn   FALSE 0.035 211.000 0.000 NA   NA
 5872893 5872894 ECS88_tRNA52 ECS88_tRNA53     TRUE 0.586 37.000 0.000 NA   NA
 5872894 5872895 ECS88_tRNA53 ECS88_tRNA54     TRUE 0.603 36.000 0.000 NA   NA
 5872897 5872898 ECS88_4753 ECS88_4754 yjeF yjeE TRUE 0.727 -28.000 0.118 NA   NA
 5872898 5872899 ECS88_4754 ECS88_4755 yjeE amiB TRUE 0.868 19.000 0.109 NA   NA
 5872899 5872900 ECS88_4755 ECS88_4756 amiB mutL TRUE 0.913 10.000 0.092 1.000 N NA
 5872900 5872901 ECS88_4756 ECS88_4757 mutL miaA TRUE 0.955 -7.000 0.188 0.067 N NA
 5872901 5872902 ECS88_4757 ECS88_4758 miaA hfq TRUE 0.763 86.000 0.531 1.000   NA
 5872902 5872903 ECS88_4758 ECS88_4759 hfq hflX TRUE 0.445 76.000 0.141 1.000   NA
 5872903 5872904 ECS88_4759 ECS88_4760 hflX hflK TRUE 0.632 86.000 0.184 0.061   NA
 5872904 5872905 ECS88_4760 ECS88_4761 hflK hflC TRUE 0.999 3.000 0.947 0.008 Y NA
 5872905 5872906 ECS88_4761 ECS88_4762 hflC yjeT TRUE 0.651 82.000 0.348 NA   NA
 5872906 5872907 ECS88_4762 ECS88_4763 yjeT purA FALSE 0.185 104.000 0.051 NA   NA
 5872907 5872908 ECS88_4763 ECS88_4764 purA nsrR FALSE 0.006 205.000 0.010 NA N NA
 5872908 5872909 ECS88_4764 ECS88_4765 nsrR rnr TRUE 0.858 39.000 0.038 NA Y NA
 5872909 5872910 ECS88_4765 ECS88_4766 rnr rlmB TRUE 0.515 92.000 0.147 0.012 N NA
 5872910 5872911 ECS88_4766 ECS88_4767 rlmB yjfI FALSE 0.083 127.000 0.002 NA   NA
 5872911 5872912 ECS88_4767 ECS88_4768 yjfI yjfJ TRUE 0.987 19.000 0.911 NA   NA
 5872912 5872913 ECS88_4768 ECS88_4769 yjfJ yjfK TRUE 0.455 50.000 0.071 NA   NA
 5872913 5872914 ECS88_4769 ECS88_4770 yjfK yjfL TRUE 0.965 18.000 0.379 NA   NA
 5872914 5872915 ECS88_4770 ECS88_4771 yjfL yjfM TRUE 0.988 10.000 0.470 NA   NA
 5872915 5872916 ECS88_4771 ECS88_4772 yjfM yjfC TRUE 0.929 3.000 0.049 NA   NA
 5872916 5872917 ECS88_4772 ECS88_4773 yjfC aidB FALSE 0.289 84.000 0.133 NA N NA
 5872918 5872919 ECS88_4774 ECS88_4775 yjfN yjfO TRUE 0.542 149.000 0.588 NA   NA
 5872921 5872922 ECS88_4777 ECS88_4778 ulaR ulaG FALSE 0.223 108.000 0.000 1.000   NA
 5872923 5872924 ECS88_4779 ECS88_4780 ulaA ulaB TRUE 0.937 16.000 0.059 0.014   NA
 5872924 5872925 ECS88_4780 ECS88_4781 ulaB ulaC TRUE 0.994 10.000 0.115 0.010 Y NA
 5872925 5872926 ECS88_4781 ECS88_4782 ulaC ulaD TRUE 0.992 14.000 0.328 1.000 Y NA
 5872926 5872927 ECS88_4782 ECS88_4783 ulaD ulaE TRUE 0.994 10.000 0.250 1.000 Y NA
 5872927 5872928 ECS88_4783 ECS88_4784 ulaE ulaF TRUE 0.995 0.000 0.200 1.000 Y NA
 5872930 5872931 ECS88_4786 ECS88_4787 rpsF priB TRUE 0.941 7.000 0.122 1.000 N NA
 5872931 5872932 ECS88_4787 ECS88_4788 priB rpsR TRUE 0.947 5.000 0.128 1.000 N NA
 5872932 5872933 ECS88_4788 ECS88_4789 rpsR rplI TRUE 0.984 42.000 0.499 0.008 Y NA
 5872933 5872934 ECS88_4789 ECS88_4790 rplI   FALSE 0.008 402.000 0.000 1.000   NA
 5872934 5872935 ECS88_4790 ECS88_4791     TRUE 0.981 3.000 0.230 NA   NA
 5872936 5872937 ECS88_4792 ECS88_4793     FALSE 0.218 93.000 0.000 NA   NA
 5872937 5872938 ECS88_4793 ECS88_4794     TRUE 0.723 25.000 0.000 NA   NA
 5872938 5872939 ECS88_4794 ECS88_4795     TRUE 0.928 -3.000 0.000 NA   NA
 5872939 5872940 ECS88_4795 ECS88_4796     TRUE 0.995 10.000 0.200 0.042 Y NA
 5872940 5872941 ECS88_4796 ECS88_4797     TRUE 0.877 4.000 0.000 NA N NA
 5872941 5872942 ECS88_4797 ECS88_4798     TRUE 0.844 10.000 0.000 NA N NA
 5872945 5872946 ECS88_4801 ECS88_4802 fklB cycA FALSE 0.009 309.000 0.000 1.000 N NA
 5872947 5872948 ECS88_4803 ECS88_4804 ytfE ytfF FALSE 0.260 108.000 0.150 NA N NA
 5872948 5872949 ECS88_4804 ECS88_4805 ytfF ytfG TRUE 0.555 100.000 0.021 1.000 Y NA
 5872955 5872956 ECS88_4811 ECS88_4812 ytfL msrA FALSE 0.009 323.000 0.042 NA   NA
 5872957 5872958 ECS88_4813 ECS88_4814 ytfM ytfN TRUE 0.993 -3.000 0.575 NA   NA
 5872958 5872959 ECS88_4814 ECS88_4815 ytfN ytfP TRUE 0.974 3.000 0.167 NA   NA
 5872961 5872962 ECS88_4818 ECS88_4819 ytfQ ytfR TRUE 0.870 140.000 0.804 NA Y NA
 5872962 5872963 ECS88_4819 ECS88_4820 ytfR ytfT TRUE 0.995 14.000 0.506 1.000 Y NA
 5872963 5872964 ECS88_4820 ECS88_4821 ytfT yjfF TRUE 0.997 -13.000 0.865 0.038 Y NA
 5872968 5872969 ECS88_4825 ECS88_4826 pmbA cybC FALSE 0.038 183.000 0.028 NA   NA
 5872970 5872971 ECS88_4827 ECS88_4828 nrdG nrdD FALSE 0.373 158.000 0.464 1.000 N NA
 5872971 5872972 ECS88_4828 ECS88_4829 nrdD treC FALSE 0.005 394.000 0.000 1.000 N NA
 5872972 5872973 ECS88_4829 ECS88_4830 treC treB TRUE 0.969 50.000 0.650 1.000 Y NA
 5872973 5872974 ECS88_4830 ECS88_4831 treB treR FALSE 0.281 119.000 0.168 1.000 N NA
 5872976 5872977 ECS88_4833 ECS88_4834 yjgF pyrI FALSE 0.220 73.000 0.084 NA N NA
 5872977 5872978 ECS88_4834 ECS88_4835 pyrI pyrB TRUE 0.995 13.000 0.197 0.002 Y NA
 5872978 5872979 ECS88_4835 ECS88_5095 pyrB pyrL TRUE 0.901 4.000 0.005 1.000   NA
 5872979 5872980 ECS88_5095 ECS88_4836 pyrL yjgH FALSE 0.017 281.000 0.000 NA   NA
 5872980 5872981 ECS88_4836 ECS88_4837 yjgH yjgI FALSE 0.077 131.000 0.000 NA N NA
 5872982 5872983 ECS88_4838 ECS88_4839 yjgJ yjgK FALSE 0.059 145.000 0.000 NA N NA
 5872983 5872984 ECS88_4839 ECS88_4840 yjgK   FALSE 0.162 123.000 0.000 NA   NA
 5872989 5872990 ECS88_4845 ECS88_4846 valS holC TRUE 0.946 0.000 0.089 1.000 N NA
 5872990 5872991 ECS88_4846 ECS88_4847 holC pepA FALSE 0.062 354.000 0.494 1.000 N NA
 5872992 5872993 ECS88_4848 ECS88_4849 yjgP yjgQ TRUE 0.997 0.000 0.631 0.060   NA
 5872994 5872995 ECS88_4850 ECS88_4851 yjgR yjgB FALSE 0.099 130.000 0.007 1.000   NA
 5872995 5872996 ECS88_4851 ECS88_4852 yjgB   FALSE 0.197 75.000 0.032 NA   NA
 5872997 5872998 ECS88_tRNA55 ECS88_4853     FALSE 0.005 534.000 0.000 NA   NA
 5873002 5873003 ECS88_misc_RNA_87 ECS88_4857 RNAC insO FALSE 0.004 634.000 0.000 NA   NA
 5873003 5873004 ECS88_4857 ECS88_4858 insO   TRUE 0.928 -3.000 0.000 NA   NA
 5873004 5873005 ECS88_4858 ECS88_4859   yjhV FALSE 0.384 -73.000 0.000 NA   NA
 5873006 5873007 ECS88_4860 ECS88_4861 fecE fecD TRUE 0.997 1.000 0.380 1.000 Y NA
 5873007 5873008 ECS88_4861 ECS88_4862 fecD fecC TRUE 0.900 -513.000 0.340 0.038 Y NA
 5873008 5873009 ECS88_4862 ECS88_4863 fecC fecB TRUE 0.999 -3.000 0.864 1.000 Y NA
 5873009 5873010 ECS88_4863 ECS88_4864 fecB fecA TRUE 0.923 45.000 0.211 1.000 Y NA
 5873010 5873011 ECS88_4864 ECS88_4865 fecA fecR TRUE 0.818 87.000 0.267 NA Y NA
 5873011 5873012 ECS88_4865 ECS88_4866 fecR fecI TRUE 0.978 -3.000 0.308 NA N NA
 5873013 5873014 ECS88_4868 ECS88_4869 insA insB FALSE 0.351 -84.000 0.000 NA   NA
 5873014 5873015 ECS88_4869 ECS88_4870 insB insB TRUE 0.945 1.000 0.000 NA   NA
 5873018 5873019 ECS88_4874 ECS88_4875     TRUE 0.548 40.000 0.000 NA   NA
 5873019 5873020 ECS88_4875 ECS88_4876     TRUE 0.943 2.000 0.000 NA   NA
 5873020 5873021 ECS88_4876 ECS88_4877     TRUE 0.422 50.000 0.000 NA   NA
 5873021 5873022 ECS88_4877 ECS88_4878     TRUE 0.986 -3.000 0.000 NA Y NA
 5873022 5873023 ECS88_4878 ECS88_4879     FALSE 0.010 334.000 0.000 NA   NA
 5873023 5873024 ECS88_4879 ECS88_4880     FALSE 0.310 -99.000 0.000 NA   NA
 5873024 5873025 ECS88_4880 ECS88_4881     FALSE 0.021 254.000 0.000 NA   NA
 5873025 5873026 ECS88_4881 ECS88_4883     FALSE 0.005 541.000 0.000 NA   NA
 5873026 5873027 ECS88_4883 ECS88_4884     TRUE 0.932 4.000 0.000 NA   NA
 5873027 5873028 ECS88_4884 ECS88_4885     FALSE 0.013 301.000 0.000 NA   NA
 5873029 5873030 ECS88_4886 ECS88_4887     FALSE 0.252 80.000 0.000 NA   NA
 5873030 5873031 ECS88_4887 ECS88_4888     FALSE 0.068 172.000 0.000 NA   NA
 5873031 5873032 ECS88_4888 ECS88_4889     FALSE 0.004 1035.000 0.000 NA   NA
 5873032 5873033 ECS88_4889 ECS88_4890     TRUE 0.965 22.000 0.500 NA   NA
 5873033 5873034 ECS88_4890 ECS88_4891     FALSE 0.016 297.000 0.000 1.000   NA
 5873034 5873035 ECS88_4891 ECS88_4892     TRUE 0.615 35.000 0.000 NA   NA
 5873035 5873036 ECS88_4892 ECS88_4893     FALSE 0.087 155.000 0.000 NA   NA
 5873036 5873037 ECS88_4893 ECS88_4894     TRUE 0.533 -39.000 0.000 NA   NA
 5873037 5873038 ECS88_4894 ECS88_4895   yeeS TRUE 0.466 46.000 0.000 NA   NA
 5873038 5873039 ECS88_4895 ECS88_4896 yeeS yeeT FALSE 0.322 63.000 0.000 NA   NA
 5873039 5873040 ECS88_4896 ECS88_4897 yeeT   TRUE 0.947 0.000 0.000 NA   NA
 5873041 5873042 ECS88_4898 ECS88_4899     TRUE 0.995 12.000 0.400 1.000 Y NA
 5873043 5873044 ECS88_4900 ECS88_4901 yeeU mtnK FALSE 0.004 928.000 0.000 NA   NA
 5873044 5873045 ECS88_4901 ECS88_4902 mtnK mtnA TRUE 0.949 10.000 0.104 1.000   NA
 5873045 5873046 ECS88_4902 ECS88_4903 mtnA mtnB TRUE 0.560 31.000 0.000 1.000 N NA
 5873046 5873047 ECS88_4903 ECS88_4904 mtnB   FALSE 0.204 104.000 0.000 NA   NA
 5873048 5873049 ECS88_4905 ECS88_4906 yjhU   FALSE 0.208 100.000 0.000 NA   NA
 5873049 5873050 ECS88_4906 ECS88_4907   yjhF FALSE 0.369 56.000 0.000 NA   NA
 5873050 5873051 ECS88_4907 ECS88_4908 yjhF yjhG TRUE 0.599 107.000 0.000 1.000 Y NA
 5873051 5873052 ECS88_4908 ECS88_4909 yjhG yjhH TRUE 0.990 11.000 0.000 0.042 Y NA
 5873052 5873053 ECS88_4909 ECS88_4910 yjhH yjhI TRUE 0.894 5.000 0.000 1.000 N NA
 5873053 5873054 ECS88_4910 ECS88_4911 yjhI sgcR FALSE 0.119 303.000 0.000 0.056 Y NA
 5873054 5873055 ECS88_4911 ECS88_4912 sgcR sgcE TRUE 0.966 17.000 0.000 1.000 Y NA
 5873055 5873056 ECS88_4912 ECS88_4913 sgcE sgcA TRUE 0.980 12.000 0.000 1.000 Y NA
 5873058 5873059 ECS88_4914 ECS88_4915 sgcQ sgcC TRUE 0.985 13.000 0.500 1.000   NA
 5873059 5873060 ECS88_4915 ECS88_4916 sgcC sgcB TRUE 0.993 12.000 0.148 0.014 Y NA
 5873060 5873061 ECS88_4916 ECS88_4917 sgcB sgcX TRUE 0.991 -3.000 0.111 1.000 Y NA
 5873061 5873062 ECS88_4917 ECS88_4920 sgcX yjhP FALSE 0.003 786.000 0.000 1.000 N NA
 5873062 5873063 ECS88_4920 ECS88_4921 yjhP yjhQ FALSE 0.409 56.000 0.000 1.000   NA
 5873063 5873064 ECS88_4921 ECS88_4922 yjhQ yjhX TRUE 0.890 12.000 0.000 NA   NA
 5873064 5873065 ECS88_4922 ECS88_4923 yjhX   FALSE 0.006 491.000 0.000 NA   NA
 5873066 5873067 ECS88_4924 ECS88_4925   yjhR TRUE 0.570 -33.000 0.000 NA   NA
 5873068 5873069 ECS88_4926 ECS88_4927 yjhS yjhT FALSE 0.307 65.000 0.000 NA   NA
 5873069 5873070 ECS88_4927 ECS88_4928 yjhT yjhA TRUE 0.791 20.000 0.000 NA   NA
 5873070 5873071 ECS88_4928 ECS88_4929 yjhA   FALSE 0.004 799.000 0.000 NA   NA
 5873072 5873073 ECS88_4930 ECS88_4931 fimB fimE FALSE 0.067 477.000 0.000 0.006 Y NA
 5873073 5873074 ECS88_4931 ECS88_4932 fimE fimA FALSE 0.004 481.000 0.000 1.000 N NA
 5873074 5873075 ECS88_4932 ECS88_4933 fimA fimI TRUE 0.970 65.000 0.600 0.006 Y NA
 5873075 5873076 ECS88_4933 ECS88_4934 fimI fimC TRUE 0.987 37.000 0.800 1.000 Y NA
 5873076 5873077 ECS88_4934 ECS88_4935 fimC fimD TRUE 0.955 67.000 0.750 1.000 Y NA
 5873077 5873078 ECS88_4935 ECS88_4936 fimD fimF TRUE 0.984 10.000 0.000 1.000 Y NA
 5873078 5873079 ECS88_4936 ECS88_4937 fimF fimG TRUE 0.989 13.000 0.000 0.006 Y NA
 5873079 5873080 ECS88_4937 ECS88_4938 fimG fimH TRUE 0.993 20.000 0.833 0.006   NA
 5873082 5873083 ECS88_4940 ECS88_4941 uxuA uxuB TRUE 0.681 81.000 0.070 1.000 Y NA
 5873083 5873084 ECS88_4941 ECS88_4942 uxuB uxuR FALSE 0.022 215.000 0.000 1.000 N NA
 5873086 5873087 ECS88_4944 ECS88_4945   yjiD TRUE 0.558 -34.000 0.000 NA   NA
 5873088 5873089 ECS88_4946 ECS88_4947 yjiE iadA FALSE 0.164 65.000 0.037 1.000 N NA
 5873089 5873090 ECS88_4947 ECS88_4948 iadA yjiG TRUE 0.853 13.000 0.028 1.000   NA
 5873090 5873091 ECS88_4948 ECS88_4949 yjiG yjiH TRUE 0.975 -3.000 0.019 0.001   NA
 5873093 5873094 ECS88_4952 ECS88_4953   yjiJ FALSE 0.035 211.000 0.000 NA   NA
 5873094 5873095 ECS88_4953 ECS88_4954 yjiJ yjiK FALSE 0.395 71.000 0.118 NA   NA
 5873095 5873096 ECS88_4954 ECS88_4955 yjiK   FALSE 0.030 221.000 0.000 NA   NA
 5873096 5873097 ECS88_4955 ECS88_4956     FALSE 0.044 196.000 0.000 NA   NA
 5873097 5873098 ECS88_4956 ECS88_4957     FALSE 0.253 -138.000 0.000 NA   NA
 5873098 5873099 ECS88_4957 ECS88_4958   hgdC TRUE 0.940 -3.000 0.078 NA   NA
 5873099 5873100 ECS88_4958 ECS88_4959 hgdC yjiM TRUE 0.878 10.000 0.078 NA N NA
 5873100 5873101 ECS88_4959 ECS88_4960 yjiM yjiN FALSE 0.108 116.000 0.013 NA   NA
 5873101 5873102 ECS88_4960 ECS88_4961 yjiN yjiO FALSE 0.406 41.000 0.020 NA   NA
 5873108 5873109 ECS88_4966 ECS88_4967     TRUE 0.831 83.000 0.000 0.000 Y NA
 5873109 5873110 ECS88_4967 ECS88_4968     TRUE 0.975 -10.000 0.000 0.043 Y NA
 5873110 5873111 ECS88_4968 ECS88_4969     FALSE 0.314 64.000 0.000 NA   NA
 5873111 5873112 ECS88_4969 ECS88_4970     TRUE 0.876 13.000 0.000 NA   NA
 5873113 5873114 ECS88_4971 ECS88_4972     TRUE 0.795 -154.000 0.654 NA   NA
 5873115 5873116 ECS88_4973 ECS88_4974 yjiA yjiX TRUE 0.967 11.000 0.212 NA   NA
 5873116 5873117 ECS88_4974 ECS88_4975 yjiX yjiY TRUE 0.874 50.000 0.531 NA   NA
 5873119 5873120 ECS88_4977 ECS88_4978 yjiZ yjjM FALSE 0.059 215.000 0.182 NA N NA
 5873122 5873123 ECS88_4980 ECS88_4981 mdoB yjjA FALSE 0.021 254.000 0.000 NA   NA
 5873123 5873124 ECS88_4981 ECS88_4982 yjjA dnaC TRUE 0.822 49.000 0.368 NA   NA
 5873124 5873125 ECS88_4982 ECS88_4983 dnaC dnaT TRUE 0.996 3.000 0.778 NA   NA
 5873125 5873126 ECS88_4983 ECS88_4984 dnaT   FALSE 0.172 107.000 0.046 NA   NA
 5873126 5873127 ECS88_4984 ECS88_4985   yjjP TRUE 0.962 -24.000 0.704 NA   NA
 5873128 5873129 ECS88_4986 ECS88_4987 yjjQ bglJ TRUE 0.999 12.000 0.889 0.015 Y NA
 5873132 5873133 ECS88_tRNA58 ECS88_tRNA57     TRUE 0.615 35.000 0.000 NA   NA
 5873133 5873134 ECS88_tRNA57 ECS88_tRNA56     TRUE 0.675 29.000 0.000 NA   NA
 5873134 5873135 ECS88_tRNA56 ECS88_4992   rsmC FALSE 0.018 268.000 0.000 NA   NA
 5873136 5873137 ECS88_4993 ECS88_4994 holD rimI TRUE 0.741 -31.000 0.121 1.000   NA
 5873137 5873138 ECS88_4994 ECS88_4995 rimI yjjG TRUE 0.807 15.000 0.018 1.000   NA
 5873138 5873139 ECS88_4995 ECS88_4996 yjjG   FALSE 0.009 386.000 0.000 1.000   NA
 5873140 5873141 ECS88_4997 ECS88_4998     FALSE 0.005 547.000 0.000 NA   NA
 5873141 5873142 ECS88_4998 ECS88_4999   yfdS TRUE 0.947 0.000 0.000 NA   NA
 5873142 5873143 ECS88_4999 ECS88_5000 yfdS yfdR TRUE 0.809 -9.000 0.000 NA   NA
 5873143 5873144 ECS88_5000 ECS88_5001 yfdR yfdQ FALSE 0.116 128.000 0.039 NA   NA
 5873144 5873145 ECS88_5001 ECS88_5002 yfdQ   TRUE 0.604 66.000 0.233 NA   NA
 5873145 5873146 ECS88_5002 ECS88_5003     FALSE 0.005 537.000 0.000 NA   NA
 5873147 5873148 ECS88_5004 ECS88_5005   ymfL TRUE 0.840 -7.000 0.000 NA   NA
 5873148 5873149 ECS88_5005 ECS88_5007 ymfL   TRUE 0.928 -3.000 0.000 NA   NA
 5873149 5873150 ECS88_5007 ECS88_5008     TRUE 0.996 -3.000 1.000 NA   NA
 5873150 5873151 ECS88_5008 ECS88_5009     TRUE 0.521 -42.000 0.000 NA   NA
 5873151 5873152 ECS88_5009 ECS88_5010   yfdN TRUE 0.938 3.000 0.000 NA   NA
 5873152 5873153 ECS88_5010 ECS88_5011 yfdN   TRUE 0.570 -33.000 0.000 NA   NA
 5873153 5873154 ECS88_5011 ECS88_5012     TRUE 0.939 -3.000 0.000 1.000   NA
 5873154 5873155 ECS88_5012 ECS88_5013     TRUE 0.791 20.000 0.000 NA   NA
 5873155 5873156 ECS88_5013 ECS88_5014     TRUE 0.995 2.000 0.667 NA   NA
 5873156 5873157 ECS88_5014 ECS88_5015   ydfT TRUE 0.766 14.000 0.002 NA   NA
 5873159 5873160 ECS88_5017 ECS88_5018 cspB essQ FALSE 0.004 753.000 0.000 NA   NA
 5873160 5873161 ECS88_5018 ECS88_5019 essQ   TRUE 0.712 -16.000 0.000 NA   NA
 5873161 5873162 ECS88_5019 ECS88_5020   ydfQ FALSE 0.012 322.000 0.000 NA   NA
 5873162 5873163 ECS88_5020 ECS88_5021 ydfQ ydfP TRUE 0.928 -3.000 0.000 NA   NA
 5873163 5873164 ECS88_5021 ECS88_5022 ydfP cspI FALSE 0.009 364.000 0.000 NA   NA
 5873164 5873165 ECS88_5022 ECS88_5023 cspI   FALSE 0.025 233.000 0.000 NA   NA
 5873165 5873166 ECS88_5023 ECS88_5024     FALSE 0.252 80.000 0.000 NA   NA
 5873166 5873167 ECS88_5024 ECS88_5025     FALSE 0.014 296.000 0.000 NA   NA
 5873167 5873168 ECS88_5025 ECS88_5026     FALSE 0.005 553.000 0.000 NA   NA
 5873168 5873169 ECS88_5026 ECS88_5027     TRUE 0.947 0.000 0.000 NA   NA
 5873169 5873170 ECS88_5027 ECS88_5028     TRUE 0.982 -9.000 0.667 NA   NA
 5873170 5873171 ECS88_5028 ECS88_5029     TRUE 0.894 -72.000 0.667 NA   NA
 5873171 5873172 ECS88_5029 ECS88_5030     FALSE 0.217 -247.000 0.049 1.000   NA
 5873172 5873173 ECS88_5030 ECS88_5031     TRUE 0.912 42.000 0.537 NA   NA
 5873173 5873174 ECS88_5031 ECS88_5032     TRUE 0.921 -7.000 0.152 NA   NA
 5873174 5873175 ECS88_5032 ECS88_5033     TRUE 0.890 12.000 0.000 NA   NA
 5873175 5873176 ECS88_5033 ECS88_5034     TRUE 0.982 -15.000 1.000 NA   NA
 5873176 5873177 ECS88_5034 ECS88_5035     TRUE 0.938 -64.000 1.000 NA   NA
 5873177 5873178 ECS88_5035 ECS88_5036     TRUE 0.803 19.000 0.000 NA   NA
 5873178 5873179 ECS88_5036 ECS88_5037     TRUE 0.918 9.000 0.000 NA   NA
 5873179 5873180 ECS88_5037 ECS88_5038     TRUE 0.841 -58.000 0.400 NA   NA
 5873180 5873181 ECS88_5038 ECS88_5039     TRUE 0.992 0.000 0.400 NA   NA
 5873181 5873182 ECS88_5039 ECS88_5040     TRUE 0.913 10.000 0.000 NA   NA
 5873182 5873183 ECS88_5040 ECS88_5041     TRUE 0.542 -37.000 0.000 NA   NA
 5873183 5873184 ECS88_5041 ECS88_5042     FALSE 0.299 -102.000 0.000 NA   NA
 5873184 5873185 ECS88_5042 ECS88_5043     TRUE 0.978 16.000 0.500 NA   NA
 5873185 5873186 ECS88_5043 ECS88_5044     FALSE 0.288 68.000 0.000 NA   NA
 5873186 5873187 ECS88_5044 ECS88_5045     TRUE 0.760 59.000 0.000 1.000 Y NA
 5873187 5873188 ECS88_5045 ECS88_5046     TRUE 0.947 0.000 0.000 NA   NA
 5873188 5873189 ECS88_5046 ECS88_5047     TRUE 0.913 10.000 0.000 NA   NA
 5873189 5873190 ECS88_5047 ECS88_5048     TRUE 0.903 11.000 0.000 NA   NA
 5873190 5873191 ECS88_5048 ECS88_5049   tfaR TRUE 0.535 41.000 0.000 NA   NA
 5873192 5873193 ECS88_5050 ECS88_5051 pinR ydfK FALSE 0.012 317.000 0.000 NA   NA
 5873193 5873194 ECS88_5051 ECS88_5053 ydfK   FALSE 0.005 576.000 0.000 NA   NA
 5873195 5873196 ECS88_5055 ECS88_5056 prfC osmY FALSE 0.008 393.000 0.000 NA   NA
 5873196 5873197 ECS88_5056 ECS88_5057 osmY ytjA FALSE 0.194 109.000 0.000 NA   NA
 5873197 5873198 ECS88_5057 ECS88_5058 ytjA yjjU FALSE 0.379 122.000 0.211 NA   NA
 5873198 5873199 ECS88_5058 ECS88_5059 yjjU yjjV TRUE 0.926 -3.000 0.057 NA   NA
 5873200 5873201 ECS88_5060 ECS88_5061 yjjW yjjI TRUE 0.962 -28.000 0.810 NA   NA
 5873202 5873203 ECS88_5062 ECS88_5063 deoC deoA TRUE 0.749 127.000 0.286 1.000 Y NA
 5873203 5873204 ECS88_5063 ECS88_5064 deoA deoB TRUE 0.782 52.000 0.398 1.000 N NA
 5873204 5873205 ECS88_5064 ECS88_5065 deoB deoD TRUE 0.765 57.000 0.414 1.000 N NA
 5873205 5873206 ECS88_5065 ECS88_5066 deoD yjjJ FALSE 0.058 167.000 0.041 NA   NA
 5873207 5873208 ECS88_5067 ECS88_5068 lplA ytjB TRUE 0.699 28.000 0.066 NA   NA
 5873209 5873210 ECS88_5069 ECS88_5070 serB radA FALSE 0.207 49.000 0.024 1.000 N NA
 5873210 5873211 ECS88_5070 ECS88_5071 radA nadR TRUE 0.528 21.000 0.021 1.000 N NA
 5873211 5873212 ECS88_5071 ECS88_5072 nadR   TRUE 0.865 14.000 0.000 NA   NA
 5873212 5873213 ECS88_5072 ECS88_5073     TRUE 0.983 2.000 0.229 NA   NA
 5873215 5873216 ECS88_5075 ECS88_5076 slt trpR FALSE 0.361 90.000 0.167 1.000 N NA
 5873220 5873221 ECS88_5080 ECS88_5081 creA creB TRUE 0.842 13.000 0.038 NA   NA
 5873221 5873222 ECS88_5081 ECS88_5082 creB creC TRUE 0.999 0.000 0.776 1.000 Y NA
 5873222 5873223 ECS88_5082 ECS88_5083 creC creD TRUE 0.658 58.000 0.311 NA N NA
 5873225 5868177 ECS88_5085 ECS88_5086 yjtD thrL FALSE 0.039 214.000 0.000 1.000   NA
 5873227 5873228 pECS88_0002 pECS88_0003 repA   FALSE 0.007 409.000 0.000 NA   NA
 5873228 5873229 pECS88_0003 pECS88_0004     TRUE 0.949 -31.000 0.667 NA   NA
 5873230 5873231 pECS88_0005 pECS88_0006     FALSE 0.054 185.000 0.000 NA   NA
 5873232 5873233 pECS88_0007 pECS88_0008     TRUE 0.651 -81.000 0.000 0.006   NA
 5873233 5873234 pECS88_0008 pECS88_0009   iutA FALSE 0.006 576.000 0.000 1.000   NA
 5873234 5873235 pECS88_0009 pECS88_0010 iutA iucD FALSE 0.155 82.000 0.050 1.000 N NA
 5873235 5873236 pECS88_0010 pECS88_0011 iucD iucC TRUE 0.997 -3.000 0.417 1.000 Y NA
 5873236 5873237 pECS88_0011 pECS88_0012 iucC iucB TRUE 0.987 0.000 0.250 1.000   NA
 5873237 5873238 pECS88_0012 pECS88_0013 iucB iucA TRUE 0.995 1.000 0.609 1.000   NA
 5873240 5873241 pECS88_0015 pECS88_0016     FALSE 0.165 72.000 0.008 NA   NA
 5873241 5873242 pECS88_0016 pECS88_0017     TRUE 0.870 -3.000 0.003 NA   NA
 5873242 5873243 pECS88_0017 pECS88_0019   sitD FALSE 0.007 468.000 0.000 1.000   NA
 5873243 5873244 pECS88_0019 pECS88_0020 sitD sitC TRUE 0.999 -3.000 0.525 0.005 Y NA
 5873244 5873245 pECS88_0020 pECS88_0021 sitC sitB TRUE 0.999 -3.000 0.857 0.065 Y NA
 5873245 5873246 pECS88_0021 pECS88_0022 sitB sitA TRUE 0.999 0.000 0.894 1.000 Y NA
 5873246 5873247 pECS88_0022 pECS88_0023 sitA   FALSE 0.162 123.000 0.000 NA   NA
 5873248 5873249 pECS88_0024 pECS88_0025 insA insB TRUE 0.697 27.000 0.000 NA   NA
 5873253 5873254 pECS88_0029 pECS88_0030     FALSE 0.004 617.000 0.000 NA   NA
 5873254 5873255 pECS88_0030 pECS88_0031     FALSE 0.028 226.000 0.000 NA   NA
 5873255 5873256 pECS88_0031 pECS88_0035     FALSE 0.003 1659.000 0.000 NA   NA
 5873256 5873257 pECS88_0035 pECS88_0036   insB TRUE 0.651 -81.000 0.000 0.006   NA
 5873257 5873258 pECS88_0036 pECS88_0037 insB sopA FALSE 0.010 291.000 0.000 1.000 N NA
 5873258 5873259 pECS88_0037 pECS88_0038 sopA sopB TRUE 0.829 0.000 0.010 1.000 N NA
 5873261 5873262 pECS88_0040 pECS88_0041     TRUE 0.907 63.000 1.000 NA   NA
 5873263 5873264 pECS88_0042 pECS88_0043     FALSE 0.091 152.000 0.000 NA   NA
 5873265 5873266 pECS88_0044 pECS88_0045 yubI   FALSE 0.228 90.000 0.000 NA   NA
 5873266 5873267 pECS88_0045 pECS88_0046     TRUE 0.947 0.000 0.000 NA   NA
 5873267 5873268 pECS88_0046 pECS88_0047   ydbA FALSE 0.003 1276.000 0.000 NA   NA
 5873268 5873269 pECS88_0047 pECS88_0048 ydbA ydcA TRUE 0.447 48.000 0.000 NA   NA
 5873269 5873270 pECS88_0048 pECS88_0050 ydcA ssb FALSE 0.005 806.000 0.000 1.000   NA
 5873270 5873271 pECS88_0050 pECS88_0051 ssb yubL TRUE 0.424 -64.000 0.000 NA   NA
 5873271 5873272 pECS88_0051 pECS88_0052 yubL   FALSE 0.010 337.000 0.000 NA   NA
 5873272 5873273 pECS88_0052 pECS88_0053     TRUE 0.995 12.000 0.400 1.000 Y NA
 5873273 5873274 pECS88_0053 pECS88_0054   ycjA FALSE 0.125 116.000 0.000 1.000 N NA
 5873274 5873275 pECS88_0054 pECS88_0055 ycjA psiB FALSE 0.404 52.000 0.000 NA   NA
 5873275 5873276 pECS88_0055 pECS88_0056 psiB psiA TRUE 0.928 -3.000 0.000 NA   NA
 5873280 5873281 pECS88_0060 pECS88_0061 yubO yubP TRUE 0.569 38.000 0.000 NA   NA
 5873283 5873284 pECS88_0063 pECS88_0064 traM traJ FALSE 0.201 106.000 0.000 NA   NA
 5873286 5873287 pECS88_0065 pECS88_0066 traY traA TRUE 0.867 33.000 0.000 0.002   NA
 5873287 5873288 pECS88_0066 pECS88_0067 traA traL TRUE 0.955 15.000 0.000 0.002   NA
 5873288 5873289 pECS88_0067 pECS88_0068 traL traE TRUE 0.921 22.000 0.000 0.002   NA
 5873289 5873290 pECS88_0068 pECS88_0069 traE traK TRUE 0.914 -13.000 0.000 0.002   NA
 5873290 5873291 pECS88_0069 pECS88_0070 traK traB TRUE 0.955 0.000 0.000 1.000   NA
 5873291 5873292 pECS88_0070 pECS88_0071 traB traP TRUE 0.786 -10.000 0.000 NA   NA
 5873292 5873293 pECS88_0071 pECS88_0072 traP trbD TRUE 0.865 -46.000 0.400 NA   NA
 5873293 5873294 pECS88_0072 pECS88_0073 trbD trbG TRUE 0.890 12.000 0.000 NA   NA
 5873294 5873295 pECS88_0073 pECS88_0074 trbG traV TRUE 0.928 -3.000 0.000 NA   NA
 5873295 5873296 pECS88_0074 pECS88_0075 traV traR FALSE 0.128 135.000 0.000 NA   NA
 5873296 5873297 pECS88_0075 pECS88_0077 traR traC FALSE 0.044 160.000 0.000 NA N NA
 5873297 5873298 pECS88_0077 pECS88_0078 traC trbI TRUE 0.928 -3.000 0.000 NA   NA
 5873298 5873299 pECS88_0078 pECS88_0079 trbI traW TRUE 0.928 -3.000 0.000 NA   NA
 5873299 5873300 pECS88_0079 pECS88_0080 traW traU TRUE 0.928 -3.000 0.000 NA   NA
 5873300 5873301 pECS88_0080 pECS88_0081 traU trbC TRUE 0.925 6.000 0.000 NA   NA
 5873301 5873302 pECS88_0081 pECS88_0082 trbC traN TRUE 0.969 -3.000 0.167 NA   NA
 5873302 5873303 pECS88_0082 pECS88_0083 traN trbE TRUE 0.736 24.000 0.000 NA   NA
 5873303 5873304 pECS88_0083 pECS88_0084 trbE traF TRUE 0.542 -37.000 0.000 NA   NA
 5873304 5873305 pECS88_0084 pECS88_0085 traF traQ FALSE 0.006 482.000 0.000 NA   NA
 5873305 5873306 pECS88_0085 pECS88_0086 traQ trbB TRUE 0.745 -13.000 0.000 NA   NA
 5873306 5873307 pECS88_0086 pECS88_0087 trbB trbJ TRUE 0.933 -70.000 1.000 NA   NA
 5873307 5873308 pECS88_0087 pECS88_0088 trbJ traH TRUE 0.928 -3.000 0.000 NA   NA
 5873308 5873309 pECS88_0088 pECS88_0089 traH traG TRUE 0.928 -3.000 0.000 NA   NA
 5873309 5873310 pECS88_0089 pECS88_0091 traG traS FALSE 0.012 319.000 0.000 NA   NA
 5873310 5873311 pECS88_0091 pECS88_0092 traS traT FALSE 0.415 -67.000 0.000 NA   NA
 5873311 5873312 pECS88_0092 pECS88_0093 traT traD FALSE 0.026 252.000 0.000 1.000   NA
 5873312 5873313 pECS88_0093 pECS88_0094 traD traI TRUE 0.992 0.000 0.167 0.002   NA
 5873313 5873314 pECS88_0094 pECS88_0095 traI traX TRUE 0.952 20.000 0.333 NA   NA
 5873314 5873315 pECS88_0095 pECS88_0096 traX finO TRUE 0.994 4.000 0.667 NA   NA
 5873315 5873316 pECS88_0096 pECS88_0097 finO yigA TRUE 0.421 138.000 0.333 NA   NA
 5873316 5873317 pECS88_0097 pECS88_0098 yigA yigB FALSE 0.057 183.000 0.000 NA   NA
 5873317 5873318 pECS88_0098 pECS88_0099 yigB repA2 TRUE 0.482 45.000 0.000 NA   NA
 5873320 5873321 pECS88_0100 pECS88_0101 repA1 yacA FALSE 0.004 916.000 0.000 NA   NA
 5873321 5873322 pECS88_0101 pECS88_0102 yacA yacB TRUE 0.928 -3.000 0.000 NA   NA
 5873322 5873323 pECS88_0102 pECS88_0103 yacB yacC TRUE 0.601 46.000 0.118 NA   NA
 5873323 5873324 pECS88_0103 pECS88_0104 yacC cia FALSE 0.099 186.000 0.118 1.000   NA
 5873327 5873328 pECS88_0108 pECS88_0109 ydeA ydfA TRUE 0.928 -3.000 0.000 NA   NA
 5873330 5873331 pECS88_0111 pECS88_0112     FALSE 0.018 268.000 0.000 NA   NA
 5873331 5873332 pECS88_0112 pECS88_0113     TRUE 0.605 -28.000 0.000 NA   NA
 5873333 5873334 pECS88_0114 pECS88_0115 cvi cvaC TRUE 0.653 -22.000 0.000 NA   NA
 5873335 5873336 pECS88_0116 pECS88_0117 cvaB cvaA TRUE 0.997 -7.000 1.000 1.000 Y NA
 5873336 5873337 pECS88_0117 pECS88_0118 cvaA   FALSE 0.007 408.000 0.000 NA   NA
 5873338 5873339 pECS88_0119 pECS88_0120 yacA yacB TRUE 0.928 -3.000 0.000 NA   NA
 5873339 5873340 pECS88_0120 pECS88_0121 yacB ybaA FALSE 0.209 99.000 0.000 NA   NA
 5873340 5873341 pECS88_0121 pECS88_0123 ybaA   FALSE 0.005 560.000 0.000 NA   NA
 5873341 5873342 pECS88_0123 pECS88_0124   iroN FALSE 0.003 853.000 0.000 1.000 N NA
 5873343 5873344 pECS88_0125 pECS88_0126 iroE iroD FALSE 0.251 85.000 0.065 NA   NA
 5873344 5873345 pECS88_0126 pECS88_0127 iroD iroC TRUE 0.719 104.000 0.667 NA N NA
 5873345 5873346 pECS88_0127 pECS88_0128 iroC iroB FALSE 0.080 140.000 0.000 1.000 N NA
 5873346 5873347 pECS88_0128 pECS88_0130 iroB   FALSE 0.004 1236.000 0.000 1.000   NA
 5873347 5873348 pECS88_0130 pECS88_0131     FALSE 0.364 110.000 0.167 NA   NA
 5873351 5873352 pECS88_0134 pECS88_0135 yqiG yqiG TRUE 0.988 -42.000 0.667 0.042 Y NA
 5873352 5873353 pECS88_0135 pECS88_0136 yqiG   FALSE 0.004 666.000 0.000 NA   NA
 5873353 5873354 pECS88_0136 pECS88_0137     FALSE 0.007 415.000 0.000 NA   NA
 5873354 5873355 pECS88_0137 pECS88_0138     FALSE 0.098 133.000 0.013 1.000   NA
 5873355 5873356 pECS88_0138 pECS88_0139     FALSE 0.152 187.000 0.000 0.006   NA
 5873356 5873357 pECS88_0139 pECS88_0140     TRUE 0.653 -22.000 0.000 NA   NA
 5873357 5873358 pECS88_0140 pECS88_0141     TRUE 0.434 49.000 0.000 NA   NA
 5873358 5873359 pECS88_0141 pECS88_0142     TRUE 0.586 37.000 0.000 NA   NA
 5873359 5873360 pECS88_0142 pECS88_0143     TRUE 0.913 10.000 0.000 NA   NA
 5873361 5873362 pECS88_0146 pECS88_0147 etsC etsB TRUE 0.989 4.000 0.303 0.070 N NA
 5873362 5873363 pECS88_0147 pECS88_0148 etsB etsA TRUE 0.942 -3.000 0.030 0.070 N NA
 5873364 5873365 pECS88_0149 pECS88_0150     TRUE 0.483 -51.000 0.000 NA   NA
 5873366 5873367 pECS88_0151 pECS88_0152     TRUE 0.972 -3.000 0.000 0.042   NA
 5873370 5873371 pECS88_0155 pECS88_0156 ompT hlyF FALSE 0.038 433.000 0.000 1.000 Y NA
 5873371 5873372 pECS88_0156 pECS88_0157 hlyF   FALSE 0.322 63.000 0.000 NA   NA
 5873372 5873226 pECS88_0157 pECS88_0001   int FALSE 0.004 683.000 0.000 NA   NA