MicrobesOnline Operon Predictions for Streptococcus suis BM407

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 7625300 7625301 SSUBM407_0001 SSUBM407_0002 dnaA dnaN TRUE 0.799 154.000 0.328 1.000 Y NA
 7625301 7625302 SSUBM407_0002 SSUBM407_0003 dnaN   FALSE 0.200 92.000 0.003 1.000 N NA
 7625302 7625303 SSUBM407_0003 SSUBM407_0004     TRUE 0.928 10.000 0.015 NA   NA
 7625303 7625304 SSUBM407_0004 SSUBM407_0005     FALSE 0.329 104.000 0.010 NA   NA
 7625304 7625305 SSUBM407_0005 SSUBM407_0006     FALSE 0.203 86.000 0.002 1.000 N NA
 7625305 7625306 SSUBM407_0006 SSUBM407_0007   pth TRUE 0.712 158.000 0.184 1.000 Y NA
 7625306 7625307 SSUBM407_0007 SSUBM407_0008 pth trcF TRUE 0.968 0.000 0.137 1.000 N NA
 7625307 7625308 SSUBM407_0008 SSUBM407_0009 trcF   TRUE 0.520 50.000 0.024 1.000 N NA
 7625308 7625309 SSUBM407_0009 SSUBM407_0010     TRUE 0.930 -13.000 0.053 1.000 N NA
 7625309 7625310 SSUBM407_0010 SSUBM407_0011     TRUE 0.915 -3.000 0.000 NA   NA
 7625310 7625311 SSUBM407_0011 SSUBM407_0012     TRUE 0.857 13.000 0.000 NA   NA
 7625311 7625312 SSUBM407_0012 SSUBM407_0013     TRUE 0.911 1.000 0.014 1.000 N NA
 7625312 7625313 SSUBM407_0013 SSUBM407_0014   hpt TRUE 0.942 8.000 0.067 0.069 N NA
 7625313 7625314 SSUBM407_0014 SSUBM407_0015 hpt ftsH TRUE 0.928 22.000 0.192 1.000 N NA
 7625314 7625315 SSUBM407_0015 SSUBM407_0016 ftsH comX FALSE 0.067 338.000 0.006 1.000   NA
 7625315 7625316 SSUBM407_0016 SSUBM407_r0001 comX   FALSE 0.022 540.000 0.000 NA   NA
 7625316 7625317 SSUBM407_r0001 SSUBM407_t0001     TRUE 0.435 52.000 0.000 NA   NA
 7625317 7625318 SSUBM407_t0001 SSUBM407_r0002     FALSE 0.057 281.000 0.000 NA   NA
 7625318 7625319 SSUBM407_r0002 SSUBM407_r0003     FALSE 0.253 78.000 0.000 NA   NA
 7625319 7625320 SSUBM407_r0003 SSUBM407_t0002     TRUE 0.905 1.000 0.000 NA   NA
 7625320 7625321 SSUBM407_t0002 SSUBM407_t0003     TRUE 0.887 3.000 0.000 NA   NA
 7625321 7625322 SSUBM407_t0003 SSUBM407_t0004     TRUE 0.518 46.000 0.000 NA   NA
 7625322 7625323 SSUBM407_t0004 SSUBM407_t0005     TRUE 0.878 4.000 0.000 NA   NA
 7625323 7625324 SSUBM407_t0005 SSUBM407_t0006     TRUE 0.844 15.000 0.000 NA   NA
 7625324 7625325 SSUBM407_t0006 SSUBM407_t0007     TRUE 0.857 13.000 0.000 NA   NA
 7625325 7625326 SSUBM407_t0007 SSUBM407_t0008     TRUE 0.864 8.000 0.000 NA   NA
 7625326 7625327 SSUBM407_t0008 SSUBM407_t0009     TRUE 0.805 19.000 0.000 NA   NA
 7625327 7625328 SSUBM407_t0009 SSUBM407_t0010     TRUE 0.491 48.000 0.000 NA   NA
 7625328 7625329 SSUBM407_t0010 SSUBM407_t0011     TRUE 0.857 13.000 0.000 NA   NA
 7625329 7625330 SSUBM407_t0011 SSUBM407_t0012     TRUE 0.831 17.000 0.000 NA   NA
 7625330 7625331 SSUBM407_t0012 SSUBM407_t0013     TRUE 0.867 7.000 0.000 NA   NA
 7625331 7625332 SSUBM407_t0013 SSUBM407_t0014     TRUE 0.867 11.000 0.000 NA   NA
 7625332 7625333 SSUBM407_t0014 SSUBM407_t0015     TRUE 0.837 16.000 0.000 NA   NA
 7625333 7625334 SSUBM407_t0015 SSUBM407_t0016     TRUE 0.667 32.000 0.000 NA   NA
 7625334 7625335 SSUBM407_t0016 SSUBM407_t0017     TRUE 0.857 13.000 0.000 NA   NA
 7625335 7625336 SSUBM407_t0017 SSUBM407_0017     TRUE 0.353 60.000 0.000 NA   NA
 7625336 7625337 SSUBM407_0017 SSUBM407_0018     TRUE 0.995 -10.000 0.550 0.004   NA
 7625337 7625338 SSUBM407_0018 SSUBM407_0019     TRUE 0.414 85.000 0.021 NA   NA
 7625338 7625339 SSUBM407_0019 SSUBM407_0020   prsA1 TRUE 0.521 103.000 0.107 NA   NA
 7625339 7625340 SSUBM407_0020 SSUBM407_0021 prsA1   TRUE 0.699 87.000 0.048 1.000 Y NA
 7625340 7625341 SSUBM407_0021 SSUBM407_0022   recO TRUE 0.895 -13.000 0.012 1.000 N NA
 7625341 7625342 SSUBM407_0022 SSUBM407_0023 recO plsX TRUE 0.915 -3.000 0.011 1.000 N NA
 7625342 7625343 SSUBM407_0023 SSUBM407_0024 plsX   TRUE 0.971 -7.000 0.017 0.009   NA
 7625343 7625344 SSUBM407_0024 SSUBM407_0025   purC FALSE 0.332 118.000 0.017 1.000   NA
 7625344 7625345 SSUBM407_0025 SSUBM407_0026 purC   TRUE 0.977 13.000 0.043 1.000 Y NA
 7625345 7625346 SSUBM407_0026 SSUBM407_0027   purF TRUE 0.980 3.000 0.024 1.000 Y NA
 7625346 7625347 SSUBM407_0027 SSUBM407_0028 purF purM TRUE 0.922 56.000 0.248 1.000 Y NA
 7625347 7625348 SSUBM407_0028 SSUBM407_0029 purM purN TRUE 0.996 -3.000 0.238 0.003 Y NA
 7625348 7625349 SSUBM407_0029 SSUBM407_0030 purN purH TRUE 0.991 10.000 0.225 1.000 Y NA
 7625349 7625350 SSUBM407_0030 SSUBM407_0031 purH purD TRUE 0.799 126.000 0.238 1.000 Y NA
 7625350 7625351 SSUBM407_0031 SSUBM407_0032 purD purE TRUE 0.947 26.000 0.044 1.000 Y NA
 7625351 7625352 SSUBM407_0032 SSUBM407_0033 purE purK TRUE 0.993 -13.000 0.136 0.001 Y NA
 7625352 7625353 SSUBM407_0033 SSUBM407_0034 purK   TRUE 0.544 44.000 0.000 NA   NA
 7625353 7625354 SSUBM407_0034 SSUBM407_0035     FALSE 0.274 73.000 0.000 NA   NA
 7625354 7625355 SSUBM407_0035 SSUBM407_0036   purB TRUE 0.897 2.000 0.000 NA   NA
 7625355 7625356 SSUBM407_0036 SSUBM407_0037 purB   FALSE 0.017 937.000 0.000 NA   NA
 7625356 7625357 SSUBM407_0037 SSUBM407_0038     TRUE 0.861 10.000 0.000 NA   NA
 7625357 7625358 SSUBM407_0038 SSUBM407_0039     TRUE 0.865 12.000 0.000 NA   NA
 7625358 7625359 SSUBM407_0039 SSUBM407_0040     TRUE 0.910 -7.000 0.000 NA   NA
 7625359 7625360 SSUBM407_0040 SSUBM407_0041     TRUE 0.870 6.000 0.000 NA   NA
 7625360 7625361 SSUBM407_0041 SSUBM407_0042     TRUE 0.887 3.000 0.000 NA   NA
 7625361 7625362 SSUBM407_0042 SSUBM407_0043   ruvB FALSE 0.008 570.000 0.000 1.000 N NA
 7625362 7625363 SSUBM407_0043 SSUBM407_0044 ruvB   TRUE 0.911 0.000 0.000 1.000   NA
 7625363 7625364 SSUBM407_0044 SSUBM407_0045     TRUE 0.928 2.000 0.000 0.063   NA
 7625364 7625365 SSUBM407_0045 SSUBM407_0046     FALSE 0.071 247.000 0.000 1.000   NA
 7625365 7625366 SSUBM407_0046 SSUBM407_0047     FALSE 0.043 405.000 0.000 0.085   NA
 7625367 7625368 SSUBM407_0048 SSUBM407_0049     FALSE 0.110 188.000 0.000 NA   NA
 7625369 7625370 SSUBM407_0050 SSUBM407_0051     TRUE 0.723 25.000 0.000 NA   NA
 7625370 7625371 SSUBM407_0051 SSUBM407_0052     TRUE 0.424 53.000 0.000 NA   NA
 7625371 7625372 SSUBM407_0052 SSUBM407_0053   mutL FALSE 0.191 118.000 0.000 NA   NA
 7625372 7625373 SSUBM407_0053 SSUBM407_0054 mutL ruvA TRUE 0.902 39.000 0.016 1.000 Y NA
 7625375 7625376 SSUBM407_0056 SSUBM407_0057 tag cinA TRUE 0.753 37.000 0.011 1.000   NA
 7625376 7625377 SSUBM407_0057 SSUBM407_0058 cinA recA TRUE 0.726 52.000 0.083 1.000   NA
 7625377 7625378 SSUBM407_0058 SSUBM407_0059 recA   FALSE 0.066 236.000 0.004 1.000 N NA
 7625378 7625379 SSUBM407_0059 SSUBM407_0060     TRUE 0.400 100.000 0.032 1.000   NA
 7625379 7625380 SSUBM407_0060 SSUBM407_0061     TRUE 0.994 0.000 0.537 1.000   NA
 7625380 7625381 SSUBM407_0061 SSUBM407_0062     TRUE 0.992 12.000 0.651 NA   NA
 7625381 7625382 SSUBM407_0062 SSUBM407_0063     FALSE 0.090 208.000 0.000 NA   NA
 7625382 7625383 SSUBM407_0063 SSUBM407_0064     FALSE 0.274 73.000 0.000 NA   NA
 7625383 7625384 SSUBM407_0064 SSUBM407_0065   rpsJ FALSE 0.044 323.000 0.000 NA   NA
 7625384 7625385 SSUBM407_0065 SSUBM407_0066 rpsJ rplC TRUE 0.919 97.000 0.467 0.041 Y NA
 7625385 7625386 SSUBM407_0066 SSUBM407_0067 rplC rplD TRUE 0.992 25.000 0.544 0.031 Y NA
 7625386 7625387 SSUBM407_0067 SSUBM407_0068 rplD rplW TRUE 0.997 0.000 0.307 0.031 Y NA
 7625387 7625388 SSUBM407_0068 SSUBM407_0069 rplW rplB TRUE 0.997 18.000 0.849 0.037 Y NA
 7625388 7625389 SSUBM407_0069 SSUBM407_0070 rplB rpsS TRUE 0.858 251.000 0.820 0.041 Y NA
 7625389 7625390 SSUBM407_0070 SSUBM407_0071 rpsS rplV TRUE 0.997 18.000 0.769 0.041 Y NA
 7625390 7625391 SSUBM407_0071 SSUBM407_0072 rplV rpsC TRUE 0.997 13.000 0.719 0.041 Y NA
 7625391 7625392 SSUBM407_0072 SSUBM407_0073 rpsC rplP TRUE 0.998 4.000 0.828 0.041 Y NA
 7625392 7625393 SSUBM407_0073 SSUBM407_0074 rplP rpmC TRUE 0.998 10.000 0.802 0.031 Y NA
 7625393 7625394 SSUBM407_0074 SSUBM407_0075 rpmC rpsQ TRUE 0.996 24.000 0.828 0.031 Y NA
 7625394 7625395 SSUBM407_0075 SSUBM407_0076 rpsQ rplN TRUE 0.995 25.000 0.791 0.041 Y NA
 7625395 7625396 SSUBM407_0076 SSUBM407_0077 rplN rplX TRUE 0.936 139.000 0.810 0.041 Y NA
 7625396 7625397 SSUBM407_0077 SSUBM407_0078 rplX rplE TRUE 0.995 24.000 0.758 0.031 Y NA
 7625397 7625398 SSUBM407_0078 SSUBM407_0079 rplE rpsN TRUE 0.996 15.000 0.496 0.031 Y NA
 7625398 7625399 SSUBM407_0079 SSUBM407_0080 rpsN   FALSE 0.173 131.000 0.000 NA   NA
 7625399 7625400 SSUBM407_0080 SSUBM407_0081   rpsH TRUE 0.630 36.000 0.000 NA   NA
 7625400 7625401 SSUBM407_0081 SSUBM407_0082 rpsH   FALSE 0.158 144.000 0.000 NA   NA
 7625401 7625402 SSUBM407_0082 SSUBM407_0083     TRUE 0.491 48.000 0.000 NA   NA
 7625402 7625403 SSUBM407_0083 SSUBM407_0084   rplF FALSE 0.240 87.000 0.000 NA   NA
 7625403 7625404 SSUBM407_0084 SSUBM407_0085 rplF rplR TRUE 0.961 89.000 0.815 0.031 Y NA
 7625404 7625405 SSUBM407_0085 SSUBM407_0086 rplR rpsE TRUE 0.997 19.000 0.814 0.041 Y NA
 7625405 7625406 SSUBM407_0086 SSUBM407_0087 rpsE rpmD TRUE 0.997 15.000 0.789 0.041 Y NA
 7625406 7625407 SSUBM407_0087 SSUBM407_0088 rpmD rplO TRUE 0.926 136.000 0.653 0.005 Y NA
 7625407 7625408 SSUBM407_0088 SSUBM407_0089 rplO secY TRUE 0.988 14.000 0.730 1.000 N NA
 7625408 7625409 SSUBM407_0089 SSUBM407_0090 secY adk TRUE 0.588 94.000 0.241 1.000 N NA
 7625409 7625410 SSUBM407_0090 SSUBM407_0091 adk infA FALSE 0.283 122.000 0.059 1.000 N NA
 7625410 7625411 SSUBM407_0091 SSUBM407_0092 infA rpmJ TRUE 0.956 25.000 0.067 1.000 Y NA
 7625411 7625412 SSUBM407_0092 SSUBM407_0093 rpmJ rpsM TRUE 0.979 20.000 0.086 0.031 Y NA
 7625412 7625413 SSUBM407_0093 SSUBM407_0094 rpsM rpsK TRUE 0.997 18.000 0.810 0.031 Y NA
 7625413 7625414 SSUBM407_0094 SSUBM407_0095 rpsK rpoA TRUE 0.870 45.000 0.308 1.000 N NA
 7625414 7625415 SSUBM407_0095 SSUBM407_0096 rpoA rplQ TRUE 0.991 15.000 0.873 1.000 N NA
 7625415 7625416 SSUBM407_0096 SSUBM407_r0004 rplQ   FALSE 0.019 650.000 0.000 NA   NA
 7625416 7625417 SSUBM407_r0004 SSUBM407_t0018     TRUE 0.435 52.000 0.000 NA   NA
 7625417 7625418 SSUBM407_t0018 SSUBM407_r0005     FALSE 0.059 280.000 0.000 NA   NA
 7625418 7625419 SSUBM407_r0005 SSUBM407_r0006     FALSE 0.253 78.000 0.000 NA   NA
 7625419 7625420 SSUBM407_r0006 SSUBM407_t0019     TRUE 0.887 3.000 0.000 NA   NA
 7625420 7625421 SSUBM407_t0019 SSUBM407_t0020     TRUE 0.870 6.000 0.000 NA   NA
 7625421 7625422 SSUBM407_t0020 SSUBM407_t0021     TRUE 0.675 31.000 0.000 NA   NA
 7625422 7625423 SSUBM407_t0021 SSUBM407_t0022     TRUE 0.867 7.000 0.000 NA   NA
 7625423 7625424 SSUBM407_t0022 SSUBM407_t0023     TRUE 0.861 9.000 0.000 NA   NA
 7625424 7625425 SSUBM407_t0023 SSUBM407_t0024     TRUE 0.861 10.000 0.000 NA   NA
 7625425 7625426 SSUBM407_t0024 SSUBM407_t0025     TRUE 0.837 16.000 0.000 NA   NA
 7625426 7625427 SSUBM407_t0025 SSUBM407_t0026     TRUE 0.779 21.000 0.000 NA   NA
 7625427 7625428 SSUBM407_t0026 SSUBM407_t0027     TRUE 0.864 8.000 0.000 NA   NA
 7625428 7625429 SSUBM407_t0027 SSUBM407_t0028     TRUE 0.864 8.000 0.000 NA   NA
 7625429 7625430 SSUBM407_t0028 SSUBM407_t0029     TRUE 0.865 12.000 0.000 NA   NA
 7625430 7625431 SSUBM407_t0029 SSUBM407_t0030     TRUE 0.865 12.000 0.000 NA   NA
 7625432 7625433 SSUBM407_0097 SSUBM407_0098     TRUE 0.995 -10.000 0.714 NA   NA
 7625433 7625434 SSUBM407_0098 SSUBM407_0099     TRUE 0.861 61.000 0.429 NA   NA
 7625434 7625435 SSUBM407_0099 SSUBM407_0100     TRUE 0.996 5.000 1.000 NA   NA
 7625435 7625436 SSUBM407_0100 SSUBM407_0101     FALSE 0.050 302.000 0.000 NA   NA
 7625436 7625437 SSUBM407_0101 SSUBM407_0102     TRUE 0.861 -31.000 0.000 NA   NA
 7625437 7625438 SSUBM407_0102 SSUBM407_0103     TRUE 0.405 55.000 0.000 NA   NA
 7625438 7625439 SSUBM407_0103 SSUBM407_0104     FALSE 0.122 179.000 0.000 NA   NA
 7625442 7625443 SSUBM407_0107 SSUBM407_0108     TRUE 0.983 1.000 0.192 1.000   NA
 7625443 7625444 SSUBM407_0108 SSUBM407_0109     TRUE 0.998 -7.000 0.673 1.000 Y NA
 7625444 7625445 SSUBM407_0109 SSUBM407_0110   adcA TRUE 0.985 10.000 0.111 1.000 Y NA
 7625445 7625446 SSUBM407_0110 SSUBM407_0111 adcA copY TRUE 0.551 85.000 0.188 1.000 N NA
 7625446 7625447 SSUBM407_0111 SSUBM407_0112 copY   TRUE 0.831 17.000 0.000 NA   NA
 7625447 7625448 SSUBM407_0112 SSUBM407_0113   copZ TRUE 0.915 -3.000 0.000 NA   NA
 7625449 7625450 SSUBM407_0114 SSUBM407_0115   tyrS FALSE 0.337 58.000 0.004 1.000 N NA
 7625452 7625453 SSUBM407_0117 SSUBM407_0118     FALSE 0.241 86.000 0.000 NA   NA
 7625454 7625455 SSUBM407_0119 SSUBM407_0120 rpoB rpoC TRUE 0.933 178.000 0.851 0.002 Y NA
 7625455 7625456 SSUBM407_0120 SSUBM407_0121 rpoC   FALSE 0.240 150.000 0.007 NA   NA
 7625458 7625459 SSUBM407_0123 SSUBM407_0124     TRUE 0.996 -79.000 0.639 1.000 Y NA
 7625459 7625460 SSUBM407_0124 SSUBM407_0125   comYC TRUE 0.999 2.000 0.861 0.001 Y NA
 7625460 7625461 SSUBM407_0125 SSUBM407_0126 comYC   TRUE 0.873 -19.000 0.000 NA   NA
 7625461 7625462 SSUBM407_0126 SSUBM407_0127     TRUE 0.863 -28.000 0.000 NA   NA
 7625462 7625463 SSUBM407_0127 SSUBM407_0128     TRUE 0.984 -13.000 0.250 NA   NA
 7625463 7625464 SSUBM407_0128 SSUBM407_0129     TRUE 0.869 -22.000 0.000 NA   NA
 7625464 7625465 SSUBM407_0129 SSUBM407_0130     TRUE 0.381 57.000 0.000 NA   NA
 7625465 7625466 SSUBM407_0130 SSUBM407_0131   ackA TRUE 0.712 50.000 0.130 1.000 N NA
 7625466 7625467 SSUBM407_0131 SSUBM407_0132 ackA   FALSE 0.046 314.000 0.000 NA   NA
 7625467 7625468 SSUBM407_0132 SSUBM407_0133   folC TRUE 0.392 56.000 0.000 NA   NA
 7625470 7625471 SSUBM407_0135 SSUBM407_0136     TRUE 0.981 -3.000 0.140 NA   NA
 7625471 7625472 SSUBM407_0136 SSUBM407_0137     TRUE 0.530 45.000 0.000 NA   NA
 7625472 7625473 SSUBM407_0137 SSUBM407_0138     TRUE 0.805 19.000 0.000 NA   NA
 7625477 7625478 SSUBM407_0142 SSUBM407_0143 groES groEL TRUE 0.989 11.000 0.160 1.000 Y NA
 7625478 7625479 SSUBM407_0143 SSUBM407_0144 groEL rpsL FALSE 0.033 232.000 0.000 1.000 N NA
 7625479 7625480 SSUBM407_0144 SSUBM407_0145 rpsL rpsG TRUE 0.992 17.000 0.224 0.006 Y NA
 7625480 7625481 SSUBM407_0145 SSUBM407_0146 rpsG fus TRUE 0.468 557.000 0.579 1.000 Y NA
 7625481 7625482 SSUBM407_0146 SSUBM407_0147 fus   FALSE 0.007 989.000 0.000 1.000 N NA
 7625482 7625483 SSUBM407_0147 SSUBM407_0148   plr FALSE 0.014 367.000 0.000 1.000 N NA
 7625483 7625484 SSUBM407_0148 SSUBM407_0149 plr pgk FALSE 0.280 256.000 0.000 0.007 Y NA
 7625484 7625485 SSUBM407_0149 SSUBM407_0150 pgk   FALSE 0.027 807.000 0.002 NA   NA
 7625485 7625486 SSUBM407_0150 SSUBM407_0151   glnR TRUE 0.650 76.000 0.154 NA   NA
 7625486 7625487 SSUBM407_0151 SSUBM407_0152 glnR glnA TRUE 0.888 29.000 0.179 1.000 N NA
 7625488 7625489 SSUBM407_0153 SSUBM407_0154     TRUE 0.992 4.000 0.576 NA   NA
 7625490 7625491 SSUBM407_0155 SSUBM407_0156     TRUE 0.986 -3.000 0.209 1.000   NA
 7625491 7625492 SSUBM407_0156 SSUBM407_0157     TRUE 0.956 -10.000 0.030 1.000   NA
 7625494 7625495 SSUBM407_0159 SSUBM407_0160     TRUE 0.978 69.000 1.000 0.036 Y NA
 7625495 7625496 SSUBM407_0160 SSUBM407_0161     TRUE 0.998 11.000 0.800 0.036 Y NA
 7625496 7625497 SSUBM407_0161 SSUBM407_0162     TRUE 0.984 10.000 0.095 1.000 Y NA
 7625497 7625498 SSUBM407_0162 SSUBM407_0163     FALSE 0.026 275.000 0.000 NA N NA
 7625498 7625499 SSUBM407_0163 SSUBM407_0164     TRUE 0.988 -13.000 0.338 NA   NA
 7625499 7625500 SSUBM407_0164 SSUBM407_0165     TRUE 0.861 10.000 0.000 NA   NA
 7625500 7625501 SSUBM407_0165 SSUBM407_0166   epf FALSE 0.025 463.000 0.000 NA   NA
 7625502 7625503 SSUBM407_0167 SSUBM407_0168     TRUE 0.985 10.000 0.385 NA   NA
 7625503 7625504 SSUBM407_0168 SSUBM407_0169     FALSE 0.037 356.000 0.000 1.000   NA
 7625505 7625506 SSUBM407_0170 SSUBM407_0171     FALSE 0.131 170.000 0.000 NA   NA
 7625506 7625507 SSUBM407_0171 SSUBM407_0172     FALSE 0.066 268.000 0.000 NA   NA
 7625507 7625508 SSUBM407_0172 SSUBM407_0173     TRUE 0.977 2.000 0.156 0.018 N NA
 7625508 7625509 SSUBM407_0173 SSUBM407_0174     TRUE 0.849 54.000 0.182 0.028   NA
 7625509 7625510 SSUBM407_0174 SSUBM407_0175     TRUE 0.988 2.000 0.333 1.000   NA
 7625510 7625511 SSUBM407_0175 SSUBM407_0176     TRUE 0.999 -3.000 0.742 0.002 Y NA
 7625511 7625512 SSUBM407_0176 SSUBM407_0177     FALSE 0.046 191.000 0.000 1.000 N NA
 7625514 7625515 SSUBM407_0179 SSUBM407_0180 agaS   FALSE 0.172 130.000 0.000 1.000   NA
 7625517 7625518 SSUBM407_0182 SSUBM407_0183     TRUE 0.915 -3.000 0.000 NA   NA
 7625520 7625521 SSUBM407_0185 SSUBM407_0186 dinB   TRUE 0.340 43.000 0.000 NA N NA
 7625521 7625522 SSUBM407_0186 SSUBM407_0187     FALSE 0.076 239.000 0.000 NA   NA
 7625522 7625523 SSUBM407_0187 SSUBM407_0188     FALSE 0.212 102.000 0.000 1.000   NA
 7625523 7625524 SSUBM407_0188 SSUBM407_0189     FALSE 0.148 66.000 0.000 1.000 N NA
 7625525 7625526 SSUBM407_0190 SSUBM407_0191     FALSE 0.115 184.000 0.000 NA   NA
 7625527 7625528 SSUBM407_0192 SSUBM407_0193     TRUE 0.981 5.000 0.250 NA   NA
 7625528 7625529 SSUBM407_0193 SSUBM407_0194     FALSE 0.188 120.000 0.000 NA   NA
 7625529 7625530 SSUBM407_0194 SSUBM407_0195     TRUE 0.805 19.000 0.000 NA   NA
 7625530 7625531 SSUBM407_0195 SSUBM407_0196     FALSE 0.086 217.000 0.000 NA   NA
 7625531 7625532 SSUBM407_0196 SSUBM407_0197     TRUE 0.998 -15.000 0.900 1.000 Y NA
 7625532 7625533 SSUBM407_0197 SSUBM407_0198     TRUE 0.963 39.000 0.222 1.000 Y NA
 7625533 7625534 SSUBM407_0198 SSUBM407_0199     TRUE 0.416 94.000 0.100 1.000 N NA
 7625534 7625535 SSUBM407_0199 SSUBM407_0200     FALSE 0.139 162.000 0.000 NA   NA
 7625535 7625536 SSUBM407_0200 SSUBM407_0201   tpx TRUE 0.878 4.000 0.000 NA   NA
 7625537 7625538 SSUBM407_0202 SSUBM407_0203     FALSE 0.158 241.000 0.099 1.000 N NA
 7625538 7625539 SSUBM407_0203 SSUBM407_0204     TRUE 0.926 10.000 0.080 1.000 N NA
 7625540 7625541 SSUBM407_0205 SSUBM407_0206     FALSE 0.029 409.000 0.000 1.000   NA
 7625542 7625543 SSUBM407_0207 SSUBM407_0208 treA   TRUE 0.934 81.000 0.650 1.000 Y NA
 7625544 7625545 SSUBM407_0209 SSUBM407_0210     TRUE 0.375 58.000 0.000 NA   NA
 7625545 7625546 SSUBM407_0210 SSUBM407_0211     TRUE 0.959 -3.000 0.019 NA   NA
 7625546 7625547 SSUBM407_0211 SSUBM407_0212   mutS2 TRUE 0.362 151.000 0.070 1.000   NA
 7625547 7625548 SSUBM407_0212 SSUBM407_0213 mutS2   TRUE 0.529 24.000 0.000 1.000 N NA
 7625548 7625549 SSUBM407_0213 SSUBM407_0214     FALSE 0.038 207.000 0.000 1.000 N NA
 7625549 7625550 SSUBM407_0214 SSUBM407_0215     FALSE 0.027 268.000 0.000 1.000 N NA
 7625550 7625551 SSUBM407_0215 SSUBM407_0216   msrAB TRUE 0.363 40.000 0.000 1.000 N NA
 7625551 7625552 SSUBM407_0216 SSUBM407_0217 msrAB   FALSE 0.161 139.000 0.000 1.000   NA
 7625552 7625553 SSUBM407_0217 SSUBM407_0218     FALSE 0.115 184.000 0.000 NA   NA
 7625553 7625554 SSUBM407_0218 SSUBM407_0219     TRUE 0.791 20.000 0.000 NA   NA
 7625554 7625555 SSUBM407_0219 SSUBM407_0220     TRUE 0.897 2.000 0.000 NA   NA
 7625555 7625556 SSUBM407_0220 SSUBM407_m0001     FALSE 0.087 213.000 0.000 NA   NA
 7625556 7625557 SSUBM407_m0001 SSUBM407_0221     FALSE 0.206 107.000 0.000 NA   NA
 7625557 7625558 SSUBM407_0221 SSUBM407_0222     FALSE 0.248 65.000 0.000 0.080 N NA
 7625558 7625559 SSUBM407_0222 SSUBM407_0223     TRUE 0.597 68.000 0.088 1.000   NA
 7625559 7625560 SSUBM407_0223 SSUBM407_0224     TRUE 0.405 55.000 0.000 NA   NA
 7625562 7625563 SSUBM407_0226 SSUBM407_0227 pyrD   FALSE 0.017 333.000 0.000 NA N NA
 7625563 7625564 SSUBM407_0227 SSUBM407_0228     TRUE 0.932 12.000 0.019 NA   NA
 7625565 7625566 SSUBM407_0229 SSUBM407_0230     TRUE 0.992 2.000 0.500 NA   NA
 7625566 7625567 SSUBM407_0230 SSUBM407_0231     TRUE 0.977 -7.000 0.115 NA   NA
 7625567 7625568 SSUBM407_0231 SSUBM407_0232     FALSE 0.241 85.000 0.000 1.000   NA
 7625570 7625571 SSUBM407_0234 SSUBM407_0235     TRUE 0.991 -3.000 0.350 NA   NA
 7625571 7625572 SSUBM407_0235 SSUBM407_0236     TRUE 0.984 -13.000 0.250 NA   NA
 7625573 7625574 SSUBM407_0237 SSUBM407_0238     TRUE 0.965 -25.000 0.121 1.000   NA
 7625576 7625577 SSUBM407_0240 SSUBM407_0241 gla   FALSE 0.174 129.000 0.000 1.000   NA
 7625577 7625578 SSUBM407_0241 SSUBM407_0242     FALSE 0.197 112.000 0.000 1.000   NA
 7625578 7625579 SSUBM407_0242 SSUBM407_0243     TRUE 0.897 2.000 0.000 NA   NA
 7625579 7625580 SSUBM407_0243 SSUBM407_0244     FALSE 0.138 163.000 0.000 NA   NA
 7625580 7625581 SSUBM407_0244 SSUBM407_0245     FALSE 0.026 435.000 0.000 NA   NA
 7625581 7625582 SSUBM407_0245 SSUBM407_0246     FALSE 0.204 108.000 0.000 NA   NA
 7625582 7625583 SSUBM407_0246 SSUBM407_0247     TRUE 0.559 43.000 0.000 NA   NA
 7625584 7625585 SSUBM407_0248 SSUBM407_0249 rpmG1 rpmF TRUE 0.975 16.000 0.012 0.039 Y NA
 7625588 7625589 SSUBM407_0252 SSUBM407_0253 adhE   FALSE 0.011 414.000 0.000 1.000 N NA
 7625589 7625590 SSUBM407_0253 SSUBM407_0254     FALSE 0.176 129.000 0.000 NA   NA
 7625590 7625591 SSUBM407_0254 SSUBM407_0255     TRUE 0.910 -7.000 0.000 NA   NA
 7625591 7625592 SSUBM407_0255 SSUBM407_0256     TRUE 0.970 1.000 0.081 NA   NA
 7625592 7625593 SSUBM407_0256 SSUBM407_0257     TRUE 0.994 -3.000 0.562 NA   NA
 7625593 7625594 SSUBM407_0257 SSUBM407_0258     TRUE 0.986 -36.000 0.429 1.000   NA
 7625594 7625595 SSUBM407_0258 SSUBM407_0259     TRUE 0.869 6.000 0.000 1.000   NA
 7625595 7625596 SSUBM407_0259 SSUBM407_0260   mvaK1 FALSE 0.015 355.000 0.000 1.000 N NA
 7625596 7625597 SSUBM407_0260 SSUBM407_0261 mvaK1 mvaD TRUE 0.997 -7.000 0.281 0.004 Y NA
 7625597 7625598 SSUBM407_0261 SSUBM407_0262 mvaD mvaK2 TRUE 0.996 2.000 0.312 0.004 Y NA
 7625598 7625599 SSUBM407_0262 SSUBM407_0263 mvaK2 fni TRUE 0.953 11.000 0.097 0.064 N NA
 7625600 7625601 SSUBM407_0264 SSUBM407_0265     TRUE 0.999 -10.000 0.911 0.013 Y NA
 7625602 7625603 SSUBM407_0266 SSUBM407_0267     TRUE 0.990 12.000 0.569 NA   NA
 7625603 7625604 SSUBM407_0267 SSUBM407_0268     FALSE 0.261 76.000 0.000 NA   NA
 7625604 7625605 SSUBM407_0268 SSUBM407_0269   hrcA FALSE 0.018 319.000 0.000 1.000 N NA
 7625605 7625606 SSUBM407_0269 SSUBM407_0270 hrcA grpE TRUE 0.905 13.000 0.051 1.000 N NA
 7625606 7625607 SSUBM407_0270 SSUBM407_0271 grpE dnaK TRUE 0.729 97.000 0.026 0.008 Y NA
 7625607 7625608 SSUBM407_0271 SSUBM407_0272 dnaK dnaJ TRUE 0.391 432.000 0.196 0.003 Y NA
 7625608 7625609 SSUBM407_0272 SSUBM407_0273 dnaJ   FALSE 0.025 276.000 0.000 1.000 N NA
 7625609 7625610 SSUBM407_0273 SSUBM407_0274     TRUE 0.711 10.000 0.000 1.000 N NA
 7625610 7625611 SSUBM407_0274 SSUBM407_0275     FALSE 0.081 125.000 0.000 1.000 N NA
 7625611 7625612 SSUBM407_0275 SSUBM407_0276     TRUE 0.820 91.000 0.125 0.036 Y NA
 7625613 7625614 SSUBM407_0277 SSUBM407_0278     TRUE 0.897 2.000 0.000 NA   NA
 7625614 7625615 SSUBM407_0278 SSUBM407_0279     FALSE 0.167 135.000 0.000 NA   NA
 7625615 7625616 SSUBM407_0279 SSUBM407_0280     TRUE 0.356 163.000 0.000 1.000 Y NA
 7625617 7625618 SSUBM407_0281 SSUBM407_0282 truA thiD TRUE 0.939 -10.000 0.058 1.000 N NA
 7625618 7625619 SSUBM407_0282 SSUBM407_0283 thiD   TRUE 0.987 -10.000 0.276 NA   NA
 7625619 7625620 SSUBM407_0283 SSUBM407_0284     TRUE 0.972 -19.000 0.149 NA   NA
 7625620 7625621 SSUBM407_0284 SSUBM407_0285     TRUE 0.912 0.000 0.000 NA   NA
 7625621 7625622 SSUBM407_0285 SSUBM407_0286     FALSE 0.064 273.000 0.000 NA   NA
 7625622 7625623 SSUBM407_0286 SSUBM407_0287     FALSE 0.057 281.000 0.000 NA   NA
 7625623 7625624 SSUBM407_0287 SSUBM407_0288     TRUE 0.359 80.000 0.057 NA N NA
 7625624 7625625 SSUBM407_0288 SSUBM407_0289     TRUE 0.711 26.000 0.000 NA   NA
 7625625 7625626 SSUBM407_0289 SSUBM407_0290     TRUE 0.910 -7.000 0.000 NA   NA
 7625626 7625627 SSUBM407_0290 SSUBM407_0291     TRUE 0.943 -7.000 0.000 0.019   NA
 7625627 7625628 SSUBM407_0291 SSUBM407_0292     TRUE 0.715 10.000 0.000 NA N NA
 7625630 7625631 SSUBM407_0294 SSUBM407_0295     FALSE 0.204 107.000 0.000 1.000   NA
 7625631 7625632 SSUBM407_0295 SSUBM407_0296   tig FALSE 0.035 222.000 0.000 1.000 N NA
 7625632 7625633 SSUBM407_0296 SSUBM407_0297 tig   TRUE 0.450 51.000 0.000 NA   NA
 7625633 7625634 SSUBM407_0297 SSUBM407_0298   lmb FALSE 0.202 109.000 0.000 NA   NA
 7625634 7625635 SSUBM407_0298 SSUBM407_0299 lmb   TRUE 0.643 34.000 0.000 NA   NA
 7625635 7625636 SSUBM407_0299 SSUBM407_0300   rpoE FALSE 0.179 127.000 0.000 NA   NA
 7625636 7625637 SSUBM407_0300 SSUBM407_0301 rpoE pyrG FALSE 0.133 193.000 0.029 1.000 N NA
 7625637 7625638 SSUBM407_0301 SSUBM407_t0031 pyrG   FALSE 0.057 281.000 0.000 NA   NA
 7625638 7625639 SSUBM407_t0031 SSUBM407_0302   fba FALSE 0.079 235.000 0.000 NA   NA
 7625639 7625640 SSUBM407_0302 SSUBM407_0303 fba rpmB FALSE 0.012 393.000 0.000 1.000 N NA
 7625640 7625641 SSUBM407_0303 SSUBM407_r0007 rpmB   FALSE 0.019 621.000 0.000 NA   NA
 7625641 7625642 SSUBM407_r0007 SSUBM407_t0032     TRUE 0.435 52.000 0.000 NA   NA
 7625642 7625643 SSUBM407_t0032 SSUBM407_r0008     FALSE 0.059 280.000 0.000 NA   NA
 7625643 7625644 SSUBM407_r0008 SSUBM407_r0009     FALSE 0.253 78.000 0.000 NA   NA
 7625644 7625645 SSUBM407_r0009 SSUBM407_t0033     TRUE 0.905 1.000 0.000 NA   NA
 7625645 7625646 SSUBM407_t0033 SSUBM407_t0034     TRUE 0.753 23.000 0.000 NA   NA
 7625646 7625647 SSUBM407_t0034 SSUBM407_0304   recG FALSE 0.189 119.000 0.000 NA   NA
 7625651 7625652 SSUBM407_0308 SSUBM407_0309   codY FALSE 0.033 409.000 0.015 1.000 N NA
 7625652 7625653 SSUBM407_0309 SSUBM407_0310 codY   TRUE 0.902 -10.000 0.000 NA   NA
 7625653 7625654 SSUBM407_0310 SSUBM407_0311   rplS FALSE 0.070 254.000 0.000 NA   NA
 7625654 7625655 SSUBM407_0311 SSUBM407_0312 rplS   FALSE 0.139 161.000 0.000 1.000   NA
 7625655 7625656 SSUBM407_0312 SSUBM407_0313   gatC FALSE 0.085 217.000 0.000 1.000   NA
 7625656 7625657 SSUBM407_0313 SSUBM407_0314 gatC gatA TRUE 0.998 0.000 0.643 0.002 Y NA
 7625657 7625658 SSUBM407_0314 SSUBM407_0315 gatA gatB TRUE 0.998 0.000 0.492 0.002 Y NA
 7625662 7625663 SSUBM407_0319 SSUBM407_0320 galK galT TRUE 0.990 10.000 0.107 0.002 Y NA
 7625663 7625664 SSUBM407_0320 SSUBM407_0321 galT   FALSE 0.258 76.000 0.000 1.000   NA
 7625664 7625665 SSUBM407_0321 SSUBM407_0322     TRUE 0.488 48.000 0.000 1.000   NA
 7625665 7625666 SSUBM407_0322 SSUBM407_0323     FALSE 0.091 207.000 0.000 NA   NA
 7625666 7625667 SSUBM407_0323 SSUBM407_0324     FALSE 0.115 184.000 0.000 NA   NA
 7625667 7625668 SSUBM407_0324 SSUBM407_0325     TRUE 0.993 1.000 0.555 1.000   NA
 7625668 7625669 SSUBM407_0325 SSUBM407_0326     FALSE 0.179 273.000 0.068 NA   NA
 7625669 7625670 SSUBM407_0326 SSUBM407_0327     TRUE 0.951 13.000 0.150 NA N NA
 7625670 7625671 SSUBM407_0327 SSUBM407_0328     TRUE 0.994 -3.000 0.199 1.000 Y NA
 7625671 7625672 SSUBM407_0328 SSUBM407_0329     FALSE 0.201 110.000 0.000 NA   NA
 7625672 7625673 SSUBM407_0329 SSUBM407_0330     TRUE 0.915 -3.000 0.000 NA   NA
 7625673 7625674 SSUBM407_0330 SSUBM407_0331     TRUE 0.897 2.000 0.000 NA   NA
 7625674 7625675 SSUBM407_0331 SSUBM407_0332     FALSE 0.157 302.000 0.085 NA   NA
 7625675 7625676 SSUBM407_0332 SSUBM407_0333     FALSE 0.229 95.000 0.000 NA   NA
 7625676 7625677 SSUBM407_0333 SSUBM407_0334     TRUE 0.366 59.000 0.000 NA   NA
 7625677 7625678 SSUBM407_0334 SSUBM407_0335     TRUE 0.395 96.000 0.023 NA   NA
 7625678 7625679 SSUBM407_0335 SSUBM407_0336     FALSE 0.225 96.000 0.000 1.000   NA
 7625679 7625680 SSUBM407_0336 SSUBM407_0337     TRUE 0.976 -10.000 0.125 NA   NA
 7625680 7625681 SSUBM407_0337 SSUBM407_0338     TRUE 0.985 -3.000 0.188 NA   NA
 7625681 7625682 SSUBM407_0338 SSUBM407_0339     TRUE 0.997 -3.000 1.000 NA   NA
 7625682 7625683 SSUBM407_0339 SSUBM407_0340   fms TRUE 0.915 -3.000 0.000 NA   NA
 7625683 7625684 SSUBM407_0340 SSUBM407_0341 fms clpL FALSE 0.020 305.000 0.000 1.000 N NA
 7625684 7625685 SSUBM407_0341 SSUBM407_0342 clpL malM FALSE 0.050 183.000 0.000 1.000 N NA
 7625685 7625686 SSUBM407_0342 SSUBM407_0343 malM glgP TRUE 0.997 -7.000 0.289 0.029 Y NA
 7625688 7625689 SSUBM407_0345 SSUBM407_0346     TRUE 0.969 34.000 0.610 NA   NA
 7625690 7625691 SSUBM407_0347 SSUBM407_0348     TRUE 0.988 11.000 0.486 NA   NA
 7625692 7625693 SSUBM407_0349 SSUBM407_0350     FALSE 0.023 501.000 0.000 NA   NA
 11469106 7625686   SSUBM407_0343   glgP FALSE NA 6058.000 0.000 NA   NA
 11611469 7625686   SSUBM407_0343   glgP FALSE NA 6058.000 0.000 NA   NA
 11753861 7625686   SSUBM407_0343   glgP FALSE NA 6058.000 0.000 NA   NA
 11469107 7625686   SSUBM407_0343   glgP FALSE NA 6078.000 0.000 NA   NA
 11611470 7625686   SSUBM407_0343   glgP FALSE NA 6078.000 0.000 NA   NA
 11753862 7625686   SSUBM407_0343   glgP FALSE NA 6078.000 0.000 NA   NA
 11469108 7625686   SSUBM407_0343   glgP FALSE NA 6115.000 0.000 NA   NA
 11611471 7625686   SSUBM407_0343   glgP FALSE NA 6115.000 0.000 NA   NA
 11753863 7625686   SSUBM407_0343   glgP FALSE NA 6115.000 0.000 NA   NA
 11469109 7625686   SSUBM407_0343   glgP FALSE NA 6135.000 0.000 NA   NA
 11611472 7625686   SSUBM407_0343   glgP FALSE NA 6135.000 0.000 NA   NA
 11753864 7625686   SSUBM407_0343   glgP FALSE NA 6135.000 0.000 NA   NA
 11469110 7625686   SSUBM407_0343   glgP FALSE NA 6195.000 0.000 NA   NA
 11611473 7625686   SSUBM407_0343   glgP FALSE NA 6195.000 0.000 NA   NA
 11753865 7625686   SSUBM407_0343   glgP FALSE NA 6195.000 0.000 NA   NA
 11469111 7625686   SSUBM407_0343   glgP FALSE NA 6215.000 0.000 NA   NA
 11611474 7625686   SSUBM407_0343   glgP FALSE NA 6215.000 0.000 NA   NA
 11753866 7625686   SSUBM407_0343   glgP FALSE NA 6215.000 0.000 NA   NA
 11469112 7625686   SSUBM407_0343   glgP FALSE NA 6252.000 0.000 NA   NA
 11611475 7625686   SSUBM407_0343   glgP FALSE NA 6252.000 0.000 NA   NA
 11753867 7625686   SSUBM407_0343   glgP FALSE NA 6252.000 0.000 NA   NA
 7625693 7625694 SSUBM407_0350 SSUBM407_0351     TRUE 0.918 21.000 0.068 NA   NA
 7625694 7625695 SSUBM407_0351 SSUBM407_0352     FALSE 0.204 108.000 0.000 NA   NA
 7625695 7625696 SSUBM407_0352 SSUBM407_0353     FALSE 0.087 213.000 0.000 NA   NA
 7625696 7625697 SSUBM407_0353 SSUBM407_0354     FALSE 0.083 225.000 0.000 NA   NA
 7625697 7625698 SSUBM407_0354 SSUBM407_0355     FALSE 0.191 118.000 0.000 NA   NA
 7625698 7625699 SSUBM407_0355 SSUBM407_0356     TRUE 0.994 -3.000 0.530 1.000   NA
 7625699 7625700 SSUBM407_0356 SSUBM407_0357     FALSE 0.062 160.000 0.000 1.000 N NA
 7625701 7625702 SSUBM407_0358 SSUBM407_0359 gidB pbp1A TRUE 0.665 59.000 0.000 1.000 Y NA
 7625702 7625703 SSUBM407_0359 SSUBM407_0360 pbp1A recU TRUE 0.983 -31.000 0.319 1.000   NA
 7625704 7625705 SSUBM407_0361 SSUBM407_0362     TRUE 0.867 71.000 0.579 NA   NA
 7625705 7625706 SSUBM407_0362 SSUBM407_m0002     FALSE 0.162 139.000 0.000 NA   NA
 7625706 7625707 SSUBM407_m0002 SSUBM407_0363     TRUE 0.450 51.000 0.000 NA   NA
 7625707 7625708 SSUBM407_0363 SSUBM407_0364     TRUE 0.935 10.000 0.029 NA   NA
 7625710 7625711 SSUBM407_0366 SSUBM407_0367   gmk FALSE 0.237 155.000 0.010 1.000   NA
 7625711 7625712 SSUBM407_0367 SSUBM407_0368 gmk rpoZ TRUE 0.952 27.000 0.471 1.000 N NA
 7625712 7625713 SSUBM407_0368 SSUBM407_0369 rpoZ priA FALSE 0.185 193.000 0.032 0.076 N NA
 7625713 7625714 SSUBM407_0369 SSUBM407_0370 priA fmt FALSE 0.248 132.000 0.052 1.000 N NA
 7625714 7625715 SSUBM407_0370 SSUBM407_0371 fmt   TRUE 0.994 -13.000 0.305 1.000 Y NA
 7625715 7625716 SSUBM407_0371 SSUBM407_0372     TRUE 0.759 38.000 0.074 1.000 N NA
 7625716 7625717 SSUBM407_0372 SSUBM407_0373     TRUE 0.998 0.000 0.704 1.000 Y NA
 7625717 7625718 SSUBM407_0373 SSUBM407_0374     FALSE 0.069 421.000 0.039 NA   NA
 7625718 7625719 SSUBM407_0374 SSUBM407_0375     TRUE 0.995 -3.000 0.679 NA   NA
 7625719 7625720 SSUBM407_0375 SSUBM407_0376     TRUE 0.998 -28.000 0.853 0.013 Y NA
 7625720 7625721 SSUBM407_0376 SSUBM407_0377     TRUE 0.828 50.000 0.164 1.000   NA
 7625721 7625722 SSUBM407_0377 SSUBM407_0378     TRUE 0.978 2.000 0.151 1.000   NA
 7625723 7625724 SSUBM407_0379 SSUBM407_0380 cysM   TRUE 0.430 90.000 0.033 1.000   NA
 7625725 7625726 SSUBM407_0381 SSUBM407_0382 comFA comFC TRUE 0.978 -7.000 0.130 1.000   NA
 7625726 7625727 SSUBM407_0382 SSUBM407_0383 comFC   TRUE 0.539 77.000 0.080 NA   NA
 7625727 7625728 SSUBM407_0383 SSUBM407_r0010     FALSE 0.041 338.000 0.000 NA   NA
 7625728 7625729 SSUBM407_r0010 SSUBM407_t0035     TRUE 0.435 52.000 0.000 NA   NA
 7625729 7625730 SSUBM407_t0035 SSUBM407_r0011     FALSE 0.059 280.000 0.000 NA   NA
 7625730 7625731 SSUBM407_r0011 SSUBM407_r0012     FALSE 0.253 78.000 0.000 NA   NA
 7625731 7625732 SSUBM407_r0012 SSUBM407_t0036     TRUE 0.905 1.000 0.000 NA   NA
 7625732 7625733 SSUBM407_t0036 SSUBM407_t0037     TRUE 0.887 3.000 0.000 NA   NA
 7625733 7625734 SSUBM407_t0037 SSUBM407_t0038     TRUE 0.518 46.000 0.000 NA   NA
 7625734 7625735 SSUBM407_t0038 SSUBM407_t0039     TRUE 0.878 4.000 0.000 NA   NA
 7625735 7625736 SSUBM407_t0039 SSUBM407_t0040     TRUE 0.844 15.000 0.000 NA   NA
 7625736 7625737 SSUBM407_t0040 SSUBM407_t0041     TRUE 0.857 13.000 0.000 NA   NA
 7625737 7625738 SSUBM407_t0041 SSUBM407_t0042     TRUE 0.864 8.000 0.000 NA   NA
 7625738 7625739 SSUBM407_t0042 SSUBM407_t0043     TRUE 0.805 19.000 0.000 NA   NA
 7625739 7625740 SSUBM407_t0043 SSUBM407_t0044     TRUE 0.491 48.000 0.000 NA   NA
 7625742 7625743 SSUBM407_0385 SSUBM407_0386     TRUE 0.444 76.000 0.025 NA   NA
 7625743 7625744 SSUBM407_0386 SSUBM407_0387     TRUE 0.623 58.000 0.051 NA   NA
 7625744 7625745 SSUBM407_0387 SSUBM407_0388     FALSE 0.218 100.000 0.000 NA   NA
 7625747 7625748 SSUBM407_0390 SSUBM407_0391     TRUE 0.710 54.000 0.000 1.000 Y NA
 7625748 7625749 SSUBM407_0391 SSUBM407_0392     TRUE 0.990 42.000 0.810 0.026 Y NA
 7625749 7625750 SSUBM407_0392 SSUBM407_0393     TRUE 0.976 -13.000 0.000 0.026 Y NA
 7625750 7625751 SSUBM407_0393 SSUBM407_0394     TRUE 0.981 0.000 0.000 0.021 Y NA
 7625751 7625752 SSUBM407_0394 SSUBM407_0395     FALSE 0.246 216.000 0.000 1.000 Y NA
 7625752 7625753 SSUBM407_0395 SSUBM407_0396     TRUE 0.429 110.000 0.061 NA   NA
 7625753 7625754 SSUBM407_0396 SSUBM407_0397     TRUE 0.844 15.000 0.000 NA   NA
 7625754 7625755 SSUBM407_0397 SSUBM407_0398     FALSE 0.074 242.000 0.000 NA   NA
 7625755 7625756 SSUBM407_0398 SSUBM407_0399     TRUE 0.915 -3.000 0.000 NA   NA
 7625756 7625757 SSUBM407_0399 SSUBM407_0400   valS FALSE 0.301 115.000 0.008 NA   NA
 7625757 7625758 SSUBM407_0400 SSUBM407_0401 valS   FALSE 0.253 78.000 0.000 NA   NA
 7625758 7625759 SSUBM407_0401 SSUBM407_0402     FALSE 0.280 72.000 0.000 NA   NA
 7625759 7625760 SSUBM407_0402 SSUBM407_0403     FALSE 0.246 81.000 0.000 NA   NA
 7625760 7625761 SSUBM407_0403 SSUBM407_0404     FALSE 0.106 95.000 0.000 1.000 N NA
 7625761 7625762 SSUBM407_0404 SSUBM407_0405     FALSE 0.193 116.000 0.000 NA   NA
 7625762 7625763 SSUBM407_0405 SSUBM407_0406     TRUE 0.972 13.000 0.182 NA   NA
 7625763 7625764 SSUBM407_0406 SSUBM407_0407     TRUE 0.844 15.000 0.000 NA   NA
 7625764 7625765 SSUBM407_0407 SSUBM407_0408   asnA TRUE 0.351 84.000 0.005 NA   NA
 7625765 7625766 SSUBM407_0408 SSUBM407_0409 asnA   FALSE 0.074 133.000 0.000 1.000 N NA
 7625766 7625767 SSUBM407_0409 SSUBM407_0410     TRUE 0.903 18.000 0.015 NA   NA
 7625767 7625768 SSUBM407_0410 SSUBM407_0411     FALSE 0.018 707.000 0.000 NA   NA
 7625768 7625769 SSUBM407_0411 SSUBM407_0412     TRUE 0.910 -7.000 0.000 NA   NA
 7625769 7625770 SSUBM407_0412 SSUBM407_0413     TRUE 0.667 32.000 0.000 NA   NA
 7625770 7625771 SSUBM407_0413 SSUBM407_0414     FALSE 0.206 107.000 0.000 NA   NA
 7625771 7625772 SSUBM407_0414 SSUBM407_0415   srtC1 TRUE 0.775 114.000 0.500 NA   NA
 7625774 7625775 SSUBM407_0417 SSUBM407_0418 murD murG TRUE 0.984 3.000 0.060 1.000 Y NA
 7625775 7625776 SSUBM407_0418 SSUBM407_0419 murG   TRUE 0.983 6.000 0.072 NA Y NA
 7625776 7625777 SSUBM407_0419 SSUBM407_0420   ftsA TRUE 0.558 153.000 0.389 NA N NA
 7625777 7625778 SSUBM407_0420 SSUBM407_0421 ftsA ftsZ TRUE 0.987 26.000 0.460 1.000 Y NA
 7625778 7625779 SSUBM407_0421 SSUBM407_0422 ftsZ   TRUE 0.938 7.000 0.030 NA   NA
 7625779 7625780 SSUBM407_0422 SSUBM407_0423     TRUE 0.968 17.000 0.194 NA   NA
 7625780 7625781 SSUBM407_0423 SSUBM407_0424     TRUE 0.986 5.000 0.370 NA   NA
 7625781 7625782 SSUBM407_0424 SSUBM407_0425     TRUE 0.985 3.000 0.287 1.000   NA
 7625782 7625783 SSUBM407_0425 SSUBM407_0426     TRUE 0.990 9.000 0.579 NA   NA
 7625783 7625784 SSUBM407_0426 SSUBM407_m0003     TRUE 0.844 15.000 0.000 NA   NA
 7625784 7625785 SSUBM407_m0003 SSUBM407_0427     TRUE 0.913 -5.000 0.000 NA   NA
 7625785 7625786 SSUBM407_0427 SSUBM407_0428   ileS TRUE 0.866 11.000 0.000 1.000   NA
 7625787 7625788 SSUBM407_0429 SSUBM407_0430     TRUE 0.740 55.000 0.114 NA   NA
 7625788 7625789 SSUBM407_0430 SSUBM407_0431   clpE FALSE 0.215 180.000 0.079 1.000 N NA
 7625790 7625791 SSUBM407_0432 SSUBM407_0433     TRUE 0.369 126.000 0.044 NA   NA
 7625791 7625792 SSUBM407_0433 SSUBM407_0434   glnQ3 TRUE 0.998 -7.000 0.640 1.000 Y NA
 7625792 7625793 SSUBM407_0434 SSUBM407_0435 glnQ3 folD FALSE 0.198 130.000 0.017 1.000 N NA
 7625793 7625794 SSUBM407_0435 SSUBM407_0436 folD   FALSE 0.016 1449.000 0.000 NA   NA
 7625794 7625795 SSUBM407_0436 SSUBM407_0437     TRUE 0.467 50.000 0.000 NA   NA
 7625795 7625796 SSUBM407_0437 SSUBM407_0438     TRUE 0.805 19.000 0.000 NA   NA
 7625798 7625799 SSUBM407_0440 SSUBM407_0441 srtC2   FALSE 0.174 130.000 0.000 NA   NA
 7625799 7625800 SSUBM407_0441 SSUBM407_0442     FALSE 0.238 89.000 0.000 NA   NA
 7625802 7625803 SSUBM407_0444 SSUBM407_0445     TRUE 0.523 295.000 0.156 0.003 Y NA
 7625803 7625804 SSUBM407_0445 SSUBM407_0446     FALSE 0.180 126.000 0.000 NA   NA
 7625810 7625811 SSUBM407_0452 SSUBM407_0453     TRUE 0.993 -19.000 0.923 1.000 N NA
 7625811 7625812 SSUBM407_0453 SSUBM407_0454     TRUE 0.999 1.000 0.923 1.000 Y NA
 7625812 7625813 SSUBM407_0454 SSUBM407_0456     FALSE 0.017 842.000 0.000 NA   NA
 7625813 7625814 SSUBM407_0456 SSUBM407_0457     TRUE 0.915 -3.000 0.000 NA   NA
 7625814 7625815 SSUBM407_0457 SSUBM407_0458     TRUE 0.641 149.000 0.333 NA   NA
 7625815 7625816 SSUBM407_0458 SSUBM407_0459     TRUE 0.993 -16.000 0.667 NA   NA
 7625816 7625817 SSUBM407_0459 SSUBM407_0460     TRUE 0.996 11.000 1.000 NA   NA
 7625817 7625818 SSUBM407_0460 SSUBM407_0461     TRUE 0.887 3.000 0.000 NA   NA
 7625818 7625819 SSUBM407_0461 SSUBM407_0462     TRUE 0.887 3.000 0.000 NA   NA
 7625819 7625820 SSUBM407_0462 SSUBM407_0463     FALSE 0.253 78.000 0.000 NA   NA
 7625820 7625821 SSUBM407_0463 SSUBM407_0464     TRUE 0.912 0.000 0.000 NA   NA
 7625821 7625822 SSUBM407_0464 SSUBM407_0465     TRUE 0.820 18.000 0.000 NA   NA
 7625822 7625823 SSUBM407_0465 SSUBM407_0466     TRUE 0.805 19.000 0.000 NA   NA
 7625823 7625824 SSUBM407_0466 SSUBM407_0467     TRUE 0.948 62.000 1.000 NA   NA
 7625824 7625825 SSUBM407_0467 SSUBM407_0468     TRUE 0.869 -22.000 0.000 NA   NA
 7625825 7625826 SSUBM407_0468 SSUBM407_0469     TRUE 0.897 2.000 0.000 NA   NA
 7625826 7625827 SSUBM407_0469 SSUBM407_0470     FALSE 0.040 339.000 0.000 NA   NA
 7625827 7625828 SSUBM407_0470 SSUBM407_0471     FALSE 0.142 160.000 0.000 NA   NA
 7625828 7625829 SSUBM407_0471 SSUBM407_0471a     TRUE 0.905 1.000 0.000 NA   NA
 7625829 7625830 SSUBM407_0471a SSUBM407_0472     TRUE 0.879 -16.000 0.000 NA   NA
 7625830 7625831 SSUBM407_0472 SSUBM407_0473     TRUE 0.467 50.000 0.000 NA   NA
 7625831 7625832 SSUBM407_0473 SSUBM407_0474     TRUE 0.884 71.000 0.667 NA   NA
 7625832 7625833 SSUBM407_0474 SSUBM407_0475     TRUE 0.995 14.000 1.000 NA   NA
 7625836 7625837 SSUBM407_0478 SSUBM407_0479     FALSE 0.133 169.000 0.000 NA   NA
 7625837 7625838 SSUBM407_0479 SSUBM407_0479a     FALSE 0.245 82.000 0.000 NA   NA
 7625838 7625839 SSUBM407_0479a SSUBM407_0480     FALSE 0.025 461.000 0.000 NA   NA
 7625839 7625840 SSUBM407_0480 SSUBM407_0481     TRUE 0.915 -3.000 0.000 NA   NA
 7625842 7625843 SSUBM407_0483 SSUBM407_0484 tetM1   FALSE 0.032 377.000 0.000 NA   NA
 7625843 7625844 SSUBM407_0484 SSUBM407_0485     TRUE 0.915 -3.000 0.000 NA   NA
 7625844 7625845 SSUBM407_0485 SSUBM407_0486     TRUE 0.915 -3.000 0.000 NA   NA
 7625845 7625846 SSUBM407_0486 SSUBM407_0487     TRUE 0.887 3.000 0.000 NA   NA
 7625846 7625847 SSUBM407_0487 SSUBM407_0488     TRUE 0.879 -16.000 0.000 NA   NA
 7625847 7625848 SSUBM407_0488 SSUBM407_0489     TRUE 0.866 -25.000 0.000 NA   NA
 7625848 7625849 SSUBM407_0489 SSUBM407_0490     FALSE 0.192 117.000 0.000 NA   NA
 7625849 7625850 SSUBM407_0490 SSUBM407_0491     TRUE 0.559 43.000 0.000 NA   NA
 7625850 7625851 SSUBM407_0491 SSUBM407_0492     FALSE 0.122 178.000 0.000 1.000   NA
 7625851 7625852 SSUBM407_0492 SSUBM407_0493     TRUE 0.686 29.000 0.000 NA   NA
 7625852 7625853 SSUBM407_0493 SSUBM407_0494     TRUE 0.837 16.000 0.000 NA   NA
 7625853 7625854 SSUBM407_0494 SSUBM407_0495     FALSE 0.046 316.000 0.000 NA   NA
 7625855 7625856 SSUBM407_0496 SSUBM407_0497     TRUE 0.604 39.000 0.000 NA   NA
 7625856 7625857 SSUBM407_0497 SSUBM407_0498     TRUE 0.962 54.000 1.000 NA   NA
 7625857 7625858 SSUBM407_0498 SSUBM407_0499     TRUE 0.993 -3.000 0.500 NA   NA
 7625858 7625859 SSUBM407_0499 SSUBM407_0500     TRUE 0.902 -10.000 0.000 NA   NA
 7625860 7625861 SSUBM407_0501 SSUBM407_0502     TRUE 0.892 -13.000 0.000 NA   NA
 7625861 7625862 SSUBM407_0502 SSUBM407_0503     TRUE 0.989 -3.000 0.286 NA   NA
 7625862 7625863 SSUBM407_0503 SSUBM407_0504     FALSE 0.070 143.000 0.000 1.000 N NA
 7625864 7625865 SSUBM407_0505 SSUBM407_0506     FALSE 0.019 638.000 0.000 NA   NA
 7625865 7625866 SSUBM407_0506 SSUBM407_0507     TRUE 0.992 10.000 0.667 NA   NA
 7625866 7625867 SSUBM407_0507 SSUBM407_0508     TRUE 0.892 -13.000 0.000 NA   NA
 7625868 7625869 SSUBM407_0509 SSUBM407_0510   lacR2 TRUE 0.859 9.000 0.000 1.000   NA
 7625870 7625871 SSUBM407_0511 SSUBM407_0512 glkA2 lacA2 FALSE 0.225 236.000 0.000 1.000 Y NA
 7625871 7625872 SSUBM407_0512 SSUBM407_0513 lacA2 lacB2 TRUE 0.992 34.000 0.667 0.003 Y NA
 7625872 7625873 SSUBM407_0513 SSUBM407_0514 lacB2 lacC2 TRUE 0.995 12.000 0.500 1.000 Y NA
 7625873 7625874 SSUBM407_0514 SSUBM407_0515 lacC2 lacD2 TRUE 0.977 3.000 0.000 0.003 Y NA
 7625874 7625875 SSUBM407_0515 SSUBM407_0516 lacD2 lacF2 TRUE 0.990 28.000 0.667 1.000 Y NA
 7625875 7625876 SSUBM407_0516 SSUBM407_0517 lacF2 lacE2 TRUE 0.995 0.000 0.150 0.016 Y NA
 7625876 7625877 SSUBM407_0517 SSUBM407_0518 lacE2 lacG2 TRUE 0.816 66.000 0.100 1.000 Y NA
 7625877 7625878 SSUBM407_0518 SSUBM407_0519 lacG2 lacX2 TRUE 0.521 88.000 0.000 1.000 Y NA
 7625878 7625879 SSUBM407_0519 SSUBM407_0520 lacX2   FALSE 0.071 247.000 0.000 1.000   NA
 7625879 7625880 SSUBM407_0520 SSUBM407_0521     FALSE 0.068 261.000 0.000 NA   NA
 7625880 7625881 SSUBM407_0521 SSUBM407_0522     FALSE 0.220 99.000 0.000 NA   NA
 7625881 7625882 SSUBM407_0522 SSUBM407_0523     TRUE 0.997 0.000 0.286 0.003 Y NA
 7625882 7625883 SSUBM407_0523 SSUBM407_0524     TRUE 0.998 -7.000 0.571 0.003 Y NA
 7625884 7625885 SSUBM407_0525 SSUBM407_0526   lysS FALSE 0.149 152.000 0.000 NA   NA
 7625885 7625886 SSUBM407_0526 SSUBM407_0527 lysS   FALSE 0.185 103.000 0.004 1.000 N NA
 7625886 7625887 SSUBM407_0527 SSUBM407_0528     TRUE 0.944 3.000 0.018 NA   NA
 7625887 7625888 SSUBM407_0528 SSUBM407_0529     TRUE 0.952 0.000 0.012 NA   NA
 7625888 7625889 SSUBM407_0529 SSUBM407_0530     FALSE 0.212 103.000 0.000 NA   NA
 7625889 7625890 SSUBM407_0530 SSUBM407_m0004     TRUE 0.366 59.000 0.000 NA   NA
 7625890 7625891 SSUBM407_m0004 SSUBM407_0531     TRUE 0.739 24.000 0.000 NA   NA
 7625892 7625893 SSUBM407_0532 SSUBM407_0533     TRUE 0.915 -3.000 0.000 NA   NA
 7625893 7625894 SSUBM407_0533 SSUBM407_0534   ftsW FALSE 0.165 137.000 0.000 NA   NA
 7625894 7625895 SSUBM407_0534 SSUBM407_0535 ftsW ppc TRUE 0.820 21.000 0.028 1.000 N NA
 7625895 7625896 SSUBM407_0535 SSUBM407_0536 ppc   FALSE 0.088 115.000 0.000 1.000 N NA
 7625896 7625897 SSUBM407_0536 SSUBM407_0537     TRUE 0.988 -13.000 0.333 NA   NA
 7625897 7625898 SSUBM407_0537 SSUBM407_0538   tufA FALSE 0.058 356.000 0.002 NA   NA
 7625898 7625899 SSUBM407_0538 SSUBM407_0539 tufA tpi FALSE 0.106 175.000 0.003 1.000 N NA
 7625900 7625901 SSUBM407_0540 SSUBM407_0541     TRUE 0.902 -10.000 0.000 NA   NA
 7625902 7625903 SSUBM407_0542 SSUBM407_0543     TRUE 0.931 12.000 0.017 NA   NA
 7625905 7625906 SSUBM407_m0005 SSUBM407_0545     TRUE 0.405 55.000 0.000 NA   NA
 7625908 7625909 SSUBM407_0547 SSUBM407_0548     FALSE 0.131 170.000 0.000 NA   NA
 7625909 7625910 SSUBM407_0548 SSUBM407_0549     TRUE 0.578 41.000 0.000 NA   NA
 7625910 7625911 SSUBM407_0549 SSUBM407_0550   prfB TRUE 0.609 35.000 0.006 1.000 N NA
 7625911 7625912 SSUBM407_0550 SSUBM407_0551 prfB ftsE FALSE 0.235 143.000 0.053 1.000 N NA
 7625912 7625913 SSUBM407_0551 SSUBM407_0552 ftsE ftsX TRUE 0.995 -16.000 0.431 1.000 Y NA
 7625914 7625915 SSUBM407_0553 SSUBM407_0554     TRUE 0.999 -3.000 0.871 1.000 Y NA
 7625916 7625917 SSUBM407_t0045 SSUBM407_0555     FALSE 0.024 470.000 0.000 NA   NA
 7625917 7625918 SSUBM407_0555 SSUBM407_0556     TRUE 0.999 0.000 0.844 0.011 Y NA
 7625918 7625919 SSUBM407_0556 SSUBM407_0557     TRUE 0.412 54.000 0.000 1.000   NA
 7625919 7625920 SSUBM407_0557 SSUBM407_0558   sly FALSE 0.020 590.000 0.000 1.000   NA
 7625920 7625921 SSUBM407_0558 SSUBM407_0559 sly   FALSE 0.046 311.000 0.000 1.000   NA
 7625921 7625922 SSUBM407_0559 SSUBM407_0560     TRUE 0.964 28.000 0.132 1.000 Y NA
 7625924 7625925 SSUBM407_0562 SSUBM407_0563   dgk TRUE 0.944 -19.000 0.035 NA   NA
 7625925 7625926 SSUBM407_0563 SSUBM407_0564 dgk era TRUE 0.937 17.000 0.063 1.000   NA
 7625926 7625927 SSUBM407_0564 SSUBM407_0565 era fpg FALSE 0.032 613.000 0.004 1.000   NA
 7625927 7625928 SSUBM407_0565 SSUBM407_0566 fpg coaE TRUE 0.949 -7.000 0.066 1.000 N NA
 7625928 7625929 SSUBM407_0566 SSUBM407_0567 coaE pmrA TRUE 0.882 -13.000 0.007 1.000 N NA
 7625929 7625930 SSUBM407_0567 SSUBM407_0568 pmrA rpmGB TRUE 0.914 0.000 0.012 1.000 N NA
 7625930 7625931 SSUBM407_0568 SSUBM407_0569 rpmGB secG TRUE 0.507 47.000 0.012 1.000 N NA
 7625931 7625932 SSUBM407_0569 SSUBM407_0570 secG rnr FALSE 0.049 432.000 0.064 1.000 N NA
 7625932 7625933 SSUBM407_0570 SSUBM407_0571 rnr smpB TRUE 0.971 3.000 0.143 0.031 N NA
 7625935 7625936 SSUBM407_0573 SSUBM407_0574     FALSE 0.180 194.000 0.071 1.000 N NA
 7625936 7625937 SSUBM407_0574 SSUBM407_0575   copA FALSE 0.017 331.000 0.000 1.000 N NA
 7625937 7625938 SSUBM407_0575 SSUBM407_0576 copA tpx TRUE 0.363 40.000 0.000 1.000 N NA
 7625938 7625939 SSUBM407_0576 SSUBM407_0577 tpx   FALSE 0.229 95.000 0.000 NA   NA
 7625939 7625940 SSUBM407_0577 SSUBM407_0578     FALSE 0.238 89.000 0.000 NA   NA
 7625940 7625941 SSUBM407_0578 SSUBM407_0579     TRUE 0.957 12.000 0.000 1.000 Y NA
 7625941 7625942 SSUBM407_0579 SSUBM407_0580     FALSE 0.149 152.000 0.000 NA   NA
 7625942 7625943 SSUBM407_0580 SSUBM407_0581   polA FALSE 0.261 76.000 0.000 NA   NA
 7625943 7625944 SSUBM407_0581 SSUBM407_0582 polA   TRUE 0.892 -13.000 0.000 NA   NA
 7625944 7625945 SSUBM407_0582 SSUBM407_0583     FALSE 0.188 120.000 0.000 NA   NA
 7625951 7625952 SSUBM407_0589 SSUBM407_0590     TRUE 0.997 1.000 0.413 0.014 Y NA
 7625952 7625953 SSUBM407_0590 SSUBM407_0591     TRUE 0.919 15.000 0.016 NA   NA
 7625953 7625954 SSUBM407_0591 SSUBM407_0592     FALSE 0.069 259.000 0.000 NA   NA
 7625954 7625955 SSUBM407_0592 SSUBM407_0593   thrS TRUE 0.924 14.000 0.018 NA   NA
 7625956 7625957 SSUBM407_0594 SSUBM407_0595     TRUE 0.998 15.000 0.947 0.011 Y NA
 7625957 7625958 SSUBM407_0595 SSUBM407_0596     TRUE 0.995 15.000 0.400 0.032 Y NA
 7625958 7625959 SSUBM407_0596 SSUBM407_0597   glnQ4 TRUE 0.990 11.000 0.185 1.000 Y NA
 7625960 7625961 SSUBM407_0598 SSUBM407_0599 vicR vicK TRUE 0.998 -7.000 0.597 0.050 Y NA
 7625961 7625962 SSUBM407_0599 SSUBM407_0600 vicK vicX TRUE 0.942 7.000 0.038 1.000   NA
 7625962 7625963 SSUBM407_0600 SSUBM407_0601 vicX   FALSE 0.023 515.000 0.000 1.000   NA
 7625963 7625964 SSUBM407_0601 SSUBM407_0602     FALSE 0.195 166.000 0.000 0.032   NA
 7625964 7625965 SSUBM407_0602 SSUBM407_0603   penA FALSE 0.254 77.000 0.000 1.000   NA
 7625965 7625966 SSUBM407_0603 SSUBM407_0604 penA recR TRUE 0.867 9.000 0.013 1.000 N NA
 7625966 7625967 SSUBM407_0604 SSUBM407_0605 recR ddlA FALSE 0.205 105.000 0.010 1.000 N NA
 7625967 7625968 SSUBM407_0605 SSUBM407_0606 ddlA   FALSE 0.237 88.000 0.000 1.000   NA
 7625968 7625969 SSUBM407_0606 SSUBM407_0607   murF FALSE 0.174 129.000 0.000 1.000   NA
 7625969 7625970 SSUBM407_0607 SSUBM407_0608 murF   TRUE 0.475 91.000 0.059 NA   NA
 7625973 7625974 SSUBM407_0611 SSUBM407_0612     FALSE 0.078 129.000 0.000 1.000 N NA
 7625975 7625976 SSUBM407_0613 SSUBM407_0614     FALSE 0.243 85.000 0.000 NA   NA
 7625976 7625977 SSUBM407_0614 SSUBM407_0615     TRUE 0.905 1.000 0.000 NA   NA
 7625977 7625978 SSUBM407_0615 SSUBM407_0616     FALSE 0.144 157.000 0.000 NA   NA
 7625978 7625979 SSUBM407_0616 SSUBM407_0617     TRUE 0.532 105.000 0.214 1.000 N NA
 7625979 7625980 SSUBM407_0617 SSUBM407_0618     TRUE 0.998 10.000 0.933 0.032 Y NA
 7625980 7625981 SSUBM407_0618 SSUBM407_0619     TRUE 0.986 47.000 0.733 0.032 Y NA
 7625981 7625982 SSUBM407_0619 SSUBM407_0620     TRUE 0.989 18.000 0.273 1.000 Y NA
 7625982 7625983 SSUBM407_0620 SSUBM407_0621     FALSE 0.080 126.000 0.000 1.000 N NA
 7625983 7625984 SSUBM407_0621 SSUBM407_0622     TRUE 0.909 0.000 0.010 NA N NA
 7625986 7625987 SSUBM407_0624 SSUBM407_0625 rplK rplA TRUE 0.991 41.000 0.838 0.035 Y NA
 7625987 7625988 SSUBM407_0625 SSUBM407_0626 rplA   FALSE 0.206 107.000 0.000 NA   NA
 7625988 7625989 SSUBM407_0626 SSUBM407_0627     TRUE 0.861 9.000 0.000 NA   NA
 7625989 7625990 SSUBM407_0627 SSUBM407_0628     FALSE 0.153 150.000 0.000 NA   NA
 7625990 7625991 SSUBM407_0628 SSUBM407_0629   pyrH FALSE 0.130 170.000 0.000 1.000   NA
 7625991 7625992 SSUBM407_0629 SSUBM407_0630 pyrH rrf TRUE 0.705 135.000 0.626 1.000 N NA
 7625992 7625993 SSUBM407_0630 SSUBM407_0631 rrf   FALSE 0.278 132.000 0.012 1.000   NA
 7625993 7625994 SSUBM407_0631 SSUBM407_0632     TRUE 0.859 10.000 0.000 1.000   NA
 7625994 7625995 SSUBM407_0632 SSUBM407_0633     TRUE 0.861 10.000 0.000 NA   NA
 7625995 7625996 SSUBM407_0633 SSUBM407_0634     TRUE 0.870 6.000 0.000 NA   NA
 7625996 7625997 SSUBM407_0634 SSUBM407_0635     TRUE 0.378 79.000 0.010 NA   NA
 7625997 7625998 SSUBM407_0635 SSUBM407_0636     FALSE 0.154 149.000 0.000 NA   NA
 7625998 7625999 SSUBM407_0636 SSUBM407_0637     TRUE 0.897 2.000 0.000 NA   NA
 7626003 7626004 SSUBM407_0641 SSUBM407_0642 miaA   TRUE 0.958 -7.000 0.027 1.000   NA
 7626004 7626005 SSUBM407_0642 SSUBM407_0643     TRUE 0.937 -16.000 0.014 NA   NA
 7626005 7626006 SSUBM407_0643 SSUBM407_0644   rnz TRUE 0.935 11.000 0.022 NA   NA
 7626006 7626007 SSUBM407_0644 SSUBM407_0645 rnz   TRUE 0.972 -3.000 0.074 1.000   NA
 7626009 7626010 SSUBM407_0647 SSUBM407_0648     FALSE 0.063 156.000 0.000 1.000 N NA
 7626010 7626011 SSUBM407_0648 SSUBM407_0649     TRUE 0.870 -21.000 0.000 NA   NA
 7626011 7626012 SSUBM407_0649 SSUBM407_0650   apt FALSE 0.027 433.000 0.000 NA   NA
 7626012 7626013 SSUBM407_0650 SSUBM407_0651 apt metA FALSE 0.199 104.000 0.009 1.000 N NA
 7626013 7626014 SSUBM407_0651 SSUBM407_0652 metA   TRUE 0.884 10.000 0.021 NA N NA
 7626014 7626015 SSUBM407_0652 SSUBM407_0653     TRUE 0.944 2.000 0.012 NA   NA
 7626015 7626016 SSUBM407_0653 SSUBM407_0654     TRUE 0.987 -10.000 0.283 NA   NA
 7626016 7626017 SSUBM407_0654 SSUBM407_0655     FALSE 0.211 176.000 0.011 NA   NA
 7626017 7626018 SSUBM407_0655 SSUBM407_0656   rmlA FALSE 0.102 98.000 0.000 1.000 N NA
 7626018 7626019 SSUBM407_0656 SSUBM407_0657 rmlA rmlC TRUE 0.992 0.000 0.149 1.000 Y NA
 7626019 7626020 SSUBM407_0657 SSUBM407_0658 rmlC   TRUE 0.981 0.000 0.150 NA   NA
 7626020 7626021 SSUBM407_0658 SSUBM407_0659   rmlB FALSE 0.323 189.000 0.100 NA   NA
 7626021 7626022 SSUBM407_0659 SSUBM407_0660 rmlB rmlD TRUE 0.953 55.000 0.273 0.002 Y NA
 7626022 7626023 SSUBM407_0660 SSUBM407_0661 rmlD   TRUE 0.829 17.000 0.000 1.000   NA
 7626023 7626024 SSUBM407_0661 SSUBM407_0662     TRUE 0.614 38.000 0.000 1.000   NA
 7626024 7626025 SSUBM407_0662 SSUBM407_0663     TRUE 0.530 45.000 0.000 NA   NA
 7626027 7626028 SSUBM407_0665 SSUBM407_0666     TRUE 0.996 -3.000 0.289 NA Y NA
 7626028 7626029 SSUBM407_0666 SSUBM407_0667     TRUE 0.994 3.000 0.289 NA Y NA
 7626029 7626030 SSUBM407_0667 SSUBM407_0668     TRUE 0.958 0.000 0.094 1.000 N NA
 7626030 7626031 SSUBM407_0668 SSUBM407_0669     TRUE 0.589 21.000 0.000 NA N NA
 7626031 7626032 SSUBM407_0669 SSUBM407_0670     TRUE 0.654 33.000 0.000 NA   NA
 7626032 7626033 SSUBM407_0670 SSUBM407_0671     TRUE 0.915 -3.000 0.000 NA   NA
 7626033 7626034 SSUBM407_0671 SSUBM407_0672     TRUE 0.753 23.000 0.000 NA   NA
 7626034 7626035 SSUBM407_0672 SSUBM407_0673     TRUE 0.887 3.000 0.000 NA   NA
 7626035 7626036 SSUBM407_0673 SSUBM407_0674     TRUE 0.861 10.000 0.000 NA   NA
 7626036 7626037 SSUBM407_0674 SSUBM407_0675     TRUE 0.981 0.000 0.000 0.013 Y NA
 7626037 7626038 SSUBM407_0675 SSUBM407_0676     FALSE 0.210 104.000 0.000 NA   NA
 7626038 7626039 SSUBM407_0676 SSUBM407_0677     TRUE 0.994 0.000 0.568 NA   NA
 7626039 7626040 SSUBM407_0677 SSUBM407_0678     TRUE 0.959 -10.000 0.041 NA   NA
 7626040 7626041 SSUBM407_0678 SSUBM407_0679     FALSE 0.117 183.000 0.000 NA   NA
 7626043 7626044 SSUBM407_0681 SSUBM407_0682   cmk TRUE 0.922 10.000 0.012 NA   NA
 7626044 7626045 SSUBM407_0682 SSUBM407_0683 cmk infC FALSE 0.096 196.000 0.010 1.000 N NA
 7626045 7626046 SSUBM407_0683 SSUBM407_0684 infC rpmI TRUE 0.990 27.000 0.652 1.000 Y NA
 7626046 7626047 SSUBM407_0684 SSUBM407_0685 rpmI rplT TRUE 0.992 44.000 0.928 0.026 Y NA
 7626047 7626048 SSUBM407_0685 SSUBM407_0686 rplT   FALSE 0.044 326.000 0.000 NA   NA
 7626050 7626051 SSUBM407_0688 SSUBM407_0689   aroD TRUE 0.915 -3.000 0.000 NA   NA
 7626051 7626052 SSUBM407_0689 SSUBM407_0690 aroD aroF TRUE 0.974 4.000 0.000 0.004 Y NA
 7626052 7626053 SSUBM407_0690 SSUBM407_0691 aroF tyrA TRUE 0.972 8.000 0.010 1.000 Y NA
 7626053 7626054 SSUBM407_0691 SSUBM407_0692 tyrA   TRUE 0.948 10.000 0.058 NA   NA
 7626054 7626055 SSUBM407_0692 SSUBM407_0693     FALSE 0.067 263.000 0.000 NA   NA
 7626055 7626056 SSUBM407_0693 SSUBM407_0694   lacD2 TRUE 0.953 23.000 0.030 1.000 Y NA
 7626056 7626057 SSUBM407_0694 SSUBM407_0695 lacD2   FALSE 0.214 102.000 0.000 NA   NA
 7626057 7626058 SSUBM407_0695 SSUBM407_0696     FALSE 0.023 494.000 0.000 NA   NA
 7626058 7626059 SSUBM407_0696 SSUBM407_0697     TRUE 0.965 24.000 0.333 NA   NA
 7626059 7626060 SSUBM407_0697 SSUBM407_0698     TRUE 0.405 55.000 0.000 NA   NA
 7626060 7626061 SSUBM407_0698 SSUBM407_0699     TRUE 0.859 10.000 0.000 1.000   NA
 7626062 7626063 SSUBM407_0700 SSUBM407_0701 aroB aroE TRUE 0.970 13.000 0.010 1.000 Y NA
 7626063 7626064 SSUBM407_0701 SSUBM407_0702 aroE aroF2 TRUE 0.788 46.000 0.000 1.000 Y NA
 7626064 7626065 SSUBM407_0702 SSUBM407_0703 aroF2 aroF1 TRUE 0.972 10.000 0.000 0.001 Y NA
 7626065 7626066 SSUBM407_0703 SSUBM407_0704 aroF1   FALSE 0.051 301.000 0.000 NA   NA
 7626067 7626068 SSUBM407_0705 SSUBM407_0706 metG   FALSE 0.323 64.000 0.000 NA   NA
 7626068 7626069 SSUBM407_0706 SSUBM407_0707   pepB TRUE 0.361 231.000 0.204 NA   NA
 7626069 7626070 SSUBM407_0707 SSUBM407_0708 pepB   TRUE 0.897 2.000 0.000 NA   NA
 7626070 7626071 SSUBM407_0708 SSUBM407_0709     TRUE 0.837 16.000 0.000 NA   NA
 7626071 7626072 SSUBM407_0709 SSUBM407_0710     FALSE 0.266 75.000 0.000 NA   NA
 7626072 7626073 SSUBM407_0710 SSUBM407_0711   prsA TRUE 0.522 61.000 0.016 1.000   NA
 7626073 7626074 SSUBM407_0711 SSUBM407_m0006 prsA   TRUE 0.844 15.000 0.000 NA   NA
 7626074 7626075 SSUBM407_m0006 SSUBM407_0712     TRUE 0.864 8.000 0.000 NA   NA
 7626075 7626076 SSUBM407_0712 SSUBM407_0713   alaS FALSE 0.098 280.000 0.006 NA   NA
 7626076 7626077 SSUBM407_0713 SSUBM407_0714 alaS   FALSE 0.089 209.000 0.000 NA   NA
 7626077 7626078 SSUBM407_0714 SSUBM407_0715     TRUE 0.643 34.000 0.000 NA   NA
 7626078 7626079 SSUBM407_0715 SSUBM407_0716     TRUE 0.879 -16.000 0.000 NA   NA
 7626079 7626080 SSUBM407_0716 SSUBM407_0717     TRUE 0.902 -10.000 0.000 NA   NA
 7626080 7626081 SSUBM407_0717 SSUBM407_0718     TRUE 0.933 13.000 0.029 NA   NA
 7626081 7626082 SSUBM407_0718 SSUBM407_0719     TRUE 0.991 -3.000 0.362 NA   NA
 7626082 7626083 SSUBM407_0719 SSUBM407_0720     TRUE 0.861 10.000 0.000 NA   NA
 7626083 7626084 SSUBM407_0720 SSUBM407_0721     TRUE 0.711 26.000 0.000 NA   NA
 7626084 7626085 SSUBM407_0721 SSUBM407_0722     TRUE 0.861 10.000 0.000 NA   NA
 7626085 7626086 SSUBM407_0722 SSUBM407_0723     TRUE 0.861 10.000 0.000 NA   NA
 7626086 7626087 SSUBM407_0723 SSUBM407_0724     FALSE 0.204 108.000 0.000 NA   NA
 7626087 7626088 SSUBM407_0724 SSUBM407_0725   idnO FALSE 0.007 1078.000 0.000 1.000 N NA
 7626088 7626089 SSUBM407_0725 SSUBM407_0726 idnO   TRUE 0.766 51.000 0.197 1.000 N NA
 7626089 7626090 SSUBM407_0726 SSUBM407_0727     TRUE 0.979 17.000 0.094 1.000 Y NA
 7626090 7626091 SSUBM407_0727 SSUBM407_0728   kgdA TRUE 0.989 11.000 0.167 1.000 Y NA
 7626091 7626092 SSUBM407_0728 SSUBM407_0730 kgdA   FALSE 0.165 287.000 0.000 1.000 Y NA
 7626092 7626093 SSUBM407_0730 SSUBM407_0731   ugl TRUE 0.972 12.000 0.160 1.000   NA
 7626093 7626094 SSUBM407_0731 SSUBM407_0732 ugl agaV TRUE 0.980 10.000 0.267 1.000   NA
 7626094 7626095 SSUBM407_0732 SSUBM407_0733 agaV agaW TRUE 0.998 19.000 0.933 0.019 Y NA
 7626095 7626096 SSUBM407_0733 SSUBM407_0734 agaW agaD TRUE 0.999 -13.000 0.933 0.019 Y NA
 7626096 7626097 SSUBM407_0734 SSUBM407_0735 agaD   TRUE 0.842 7.000 0.002 NA N NA
 7626097 7626098 SSUBM407_0735 SSUBM407_0736   hylA FALSE 0.224 97.000 0.000 NA   NA
 7626098 7626099 SSUBM407_0736 SSUBM407_0738 hylA   FALSE 0.042 335.000 0.000 NA   NA
 7626099 7626100 SSUBM407_0738 SSUBM407_0739     TRUE 0.818 97.000 0.562 NA   NA
 7626101 7626102 SSUBM407_0740 SSUBM407_0741     TRUE 0.701 27.000 0.000 NA   NA
 7626102 7626103 SSUBM407_0741 SSUBM407_0742     TRUE 0.518 46.000 0.000 NA   NA
 7626103 7626104 SSUBM407_0742 SSUBM407_0743   nrdH TRUE 0.951 33.000 0.562 1.000 N NA
 7626105 7626106 SSUBM407_0744 SSUBM407_0745 acnA citZ TRUE 0.984 -3.000 0.013 1.000 Y NA
 7626106 7626107 SSUBM407_0745 SSUBM407_0746 citZ icd TRUE 0.990 3.000 0.140 1.000 Y NA
 7626107 7626108 SSUBM407_0746 SSUBM407_0747 icd ptsH FALSE 0.063 156.000 0.000 1.000 N NA
 7626108 7626109 SSUBM407_0747 SSUBM407_0748 ptsH pstI TRUE 0.994 5.000 0.240 0.015 Y NA
 7626111 7626112 SSUBM407_0750 SSUBM407_0751     FALSE 0.033 373.000 0.000 NA   NA
 7626112 7626113 SSUBM407_0751 SSUBM407_0752     TRUE 0.996 12.000 1.000 NA   NA
 7626115 7626116 SSUBM407_0754 SSUBM407_0755 rnc smc TRUE 0.954 3.000 0.120 1.000 N NA
 7626116 7626117 SSUBM407_0755 SSUBM407_0756 smc   TRUE 0.914 -3.000 0.000 1.000   NA
 7626117 7626118 SSUBM407_0756 SSUBM407_0757     TRUE 0.937 -10.000 0.000 0.022   NA
 7626118 7626119 SSUBM407_0757 SSUBM407_0758   ftsY TRUE 0.936 2.000 0.005 1.000   NA
 7626120 7626121 SSUBM407_0759 SSUBM407_0760     TRUE 0.779 2.000 0.000 NA N NA
 7626121 7626122 SSUBM407_0760 SSUBM407_0761   zwf FALSE 0.041 200.000 0.000 NA N NA
 7626122 7626123 SSUBM407_0761 SSUBM407_0762 zwf   TRUE 0.444 79.000 0.032 NA   NA
 7626123 7626124 SSUBM407_0762 SSUBM407_0763     TRUE 0.997 -3.000 0.841 NA   NA
 7626125 7626126 SSUBM407_0764 SSUBM407_0765 lig yegS TRUE 0.875 11.000 0.013 1.000 N NA
 7626126 7626127 SSUBM407_0765 SSUBM407_0766 yegS atpE FALSE 0.163 137.000 0.000 1.000   NA
 7626127 7626128 SSUBM407_0766 SSUBM407_0767 atpE atpB TRUE 0.937 37.000 0.189 0.005   NA
 7626128 7626129 SSUBM407_0767 SSUBM407_0768 atpB atpF TRUE 0.978 18.000 0.032 0.005 Y NA
 7626129 7626130 SSUBM407_0768 SSUBM407_0769 atpF atpH TRUE 0.996 1.000 0.222 0.004 Y NA
 7626130 7626131 SSUBM407_0769 SSUBM407_0770 atpH atpA TRUE 0.997 22.000 0.864 0.004 Y NA
 7626131 7626132 SSUBM407_0770 SSUBM407_0771 atpA atpG TRUE 0.998 12.000 0.846 0.004 Y NA
 7626132 7626133 SSUBM407_0771 SSUBM407_0772 atpG atpD TRUE 0.996 20.000 0.724 0.004 Y NA
 7626133 7626134 SSUBM407_0772 SSUBM407_0773 atpD atpC TRUE 0.998 10.000 0.837 0.004 Y NA
 7626134 7626135 SSUBM407_0773 SSUBM407_0774 atpC   TRUE 0.581 60.000 0.039 NA   NA
 7626135 7626136 SSUBM407_0774 SSUBM407_0775   murA1 TRUE 0.739 24.000 0.000 NA   NA
 7626136 7626137 SSUBM407_0775 SSUBM407_0776 murA1 epuA TRUE 0.910 -7.000 0.000 NA   NA
 7626137 7626138 SSUBM407_0776 SSUBM407_0777 epuA endA TRUE 0.877 30.000 0.079 NA   NA
 7626138 7626139 SSUBM407_0777 SSUBM407_0778 endA   TRUE 0.641 187.000 0.500 NA   NA
 7626139 7626140 SSUBM407_0778 SSUBM407_0779     TRUE 0.982 56.000 1.000 NA Y NA
 7626140 7626141 SSUBM407_0779 SSUBM407_0780   uidA TRUE 0.980 16.000 0.095 1.000 Y NA
 7626141 7626142 SSUBM407_0780 SSUBM407_0781 uidA   TRUE 0.873 46.000 0.333 1.000 N NA
 7626142 7626143 SSUBM407_0781 SSUBM407_0782   dgoA TRUE 0.717 123.000 0.583 1.000 N NA
 7626143 7626144 SSUBM407_0782 SSUBM407_0783 dgoA uxaC TRUE 0.996 2.000 0.467 1.000 Y NA
 7626144 7626145 SSUBM407_0783 SSUBM407_0784 uxaC uxuA TRUE 0.997 15.000 0.533 0.001 Y NA
 7626145 7626146 SSUBM407_0784 SSUBM407_0785 uxuA kduD TRUE 0.982 3.000 0.364 1.000 N NA
 7626146 7626147 SSUBM407_0785 SSUBM407_0786 kduD   TRUE 0.962 0.000 0.035 NA   NA
 7626147 7626148 SSUBM407_0786 SSUBM407_0787     TRUE 0.661 47.000 0.012 NA   NA
 7626148 7626149 SSUBM407_0787 SSUBM407_0788     TRUE 0.993 11.000 0.182 0.002 Y NA
 7626149 7626150 SSUBM407_0788 SSUBM407_0789   pheS FALSE 0.010 456.000 0.000 1.000 N NA
 7626150 7626151 SSUBM407_0789 SSUBM407_0790 pheS   FALSE 0.156 202.000 0.009 1.000   NA
 7626151 7626152 SSUBM407_0790 SSUBM407_0791   pheT TRUE 0.938 2.000 0.007 1.000   NA
 7626152 7626153 SSUBM407_0791 SSUBM407_0792 pheT   TRUE 0.405 55.000 0.000 NA   NA
 7626155 7626156 SSUBM407_0794 SSUBM407_0795     TRUE 0.892 -13.000 0.000 NA   NA
 7626158 7626159 SSUBM407_0797 SSUBM407_0798 folE folP TRUE 0.982 9.000 0.073 1.000 Y NA
 7626159 7626160 SSUBM407_0798 SSUBM407_0799 folP folQ TRUE 0.990 -7.000 0.094 1.000 Y NA
 7626160 7626161 SSUBM407_0799 SSUBM407_0800 folQ folK TRUE 0.992 -3.000 0.142 1.000 Y NA
 7626161 7626162 SSUBM407_0800 SSUBM407_0801 folK   FALSE 0.246 51.000 0.000 1.000 N NA
 7626163 7626164 SSUBM407_0802 SSUBM407_0803     TRUE 0.381 57.000 0.000 NA   NA
 7626164 7626165 SSUBM407_0803 SSUBM407_0804     TRUE 0.878 4.000 0.000 NA   NA
 7626166 7626167 SSUBM407_0805 SSUBM407_0806     TRUE 0.878 20.000 0.012 NA   NA
 7626168 7626169 SSUBM407_0807 SSUBM407_0808     TRUE 0.892 -13.000 0.000 NA   NA
 7626169 7626170 SSUBM407_0808 SSUBM407_0809     TRUE 0.865 12.000 0.000 NA   NA
 7626170 7626171 SSUBM407_0809 SSUBM407_0810     TRUE 0.915 -3.000 0.000 NA   NA
 7626173 7626174 SSUBM407_0812 SSUBM407_0813   pepT FALSE 0.177 128.000 0.000 NA   NA
 7626174 7626175 SSUBM407_0813 SSUBM407_0814 pepT   TRUE 0.859 10.000 0.000 1.000   NA
 7626176 7626177 SSUBM407_0815 SSUBM407_0816     TRUE 0.820 18.000 0.000 NA   NA
 7626177 7626178 SSUBM407_0816 SSUBM407_0817     TRUE 0.867 7.000 0.000 NA   NA
 7626179 7626180 SSUBM407_0819 SSUBM407_0820     TRUE 0.941 18.000 0.000 NA Y NA
 7626181 7626182 SSUBM407_0821 SSUBM407_0822     TRUE 0.915 -3.000 0.000 NA   NA
 7626182 7626183 SSUBM407_0822 SSUBM407_0823     TRUE 0.701 27.000 0.000 NA   NA
 7626183 7626184 SSUBM407_0823 SSUBM407_0824   truB TRUE 0.467 50.000 0.000 NA   NA
 7626184 7626185 SSUBM407_0824 SSUBM407_0825 truB ribC TRUE 0.912 35.000 0.308 1.000 N NA
 7626185 7626186 SSUBM407_0825 SSUBM407_0826 ribC   TRUE 0.909 -7.000 0.000 1.000   NA
 7626186 7626187 SSUBM407_0826 SSUBM407_0827   spxA FALSE 0.263 75.000 0.000 1.000   NA
 7626187 7626188 SSUBM407_0827 SSUBM407_0828 spxA   TRUE 0.968 15.000 0.169 NA   NA
 7626188 7626189 SSUBM407_0828 SSUBM407_0829     TRUE 0.989 -10.000 0.337 NA   NA
 7626189 7626190 SSUBM407_0829 SSUBM407_0830     TRUE 0.979 0.000 0.229 NA N NA
 7626190 7626191 SSUBM407_0830 SSUBM407_0831   pstS TRUE 0.534 138.000 0.303 NA N NA
 7626191 7626192 SSUBM407_0831 SSUBM407_0832 pstS pstC TRUE 0.992 3.000 0.206 1.000 Y NA
 7626192 7626193 SSUBM407_0832 SSUBM407_0833 pstC   TRUE 0.999 -10.000 0.907 0.002 Y NA
 7626193 7626194 SSUBM407_0833 SSUBM407_0834   pstB2 TRUE 0.992 25.000 0.490 0.002 Y NA
 7626194 7626195 SSUBM407_0834 SSUBM407_0835 pstB2 pstB1 TRUE 0.997 12.000 0.542 0.001 Y NA
 7626195 7626196 SSUBM407_0835 SSUBM407_0836 pstB1 phoU TRUE 0.984 29.000 0.413 NA Y NA
 7626198 7626199 SSUBM407_0838 SSUBM407_0839   ciaR FALSE 0.107 191.000 0.000 NA   NA
 7626199 7626200 SSUBM407_0839 SSUBM407_0840 ciaR ciaH TRUE 0.998 -7.000 0.606 1.000 Y NA
 7626200 7626201 SSUBM407_0840 SSUBM407_0841 ciaH   FALSE 0.042 331.000 0.000 NA   NA
 7626201 7626202 SSUBM407_0841 SSUBM407_0842     FALSE 0.028 414.000 0.000 NA   NA
 7626203 7626204 SSUBM407_0843 SSUBM407_0844 rpsT coaA FALSE 0.286 74.000 0.014 1.000 N NA
 7626205 7626206 SSUBM407_0845 SSUBM407_0846   deoA TRUE 0.943 -3.000 0.044 1.000 N NA
 7626206 7626207 SSUBM407_0846 SSUBM407_0847 deoA deoC TRUE 0.982 16.000 0.106 1.000 Y NA
 7626207 7626208 SSUBM407_0847 SSUBM407_0848 deoC cdd TRUE 0.984 -13.000 0.051 1.000 Y NA
 7626208 7626209 SSUBM407_0848 SSUBM407_0849 cdd   FALSE 0.244 81.000 0.000 1.000   NA
 7626209 7626210 SSUBM407_0849 SSUBM407_0850     FALSE 0.100 195.000 0.000 1.000   NA
 7626210 7626211 SSUBM407_0850 SSUBM407_0851     TRUE 0.992 -7.000 0.438 1.000   NA
 7626211 7626212 SSUBM407_0851 SSUBM407_0852     TRUE 0.996 2.000 0.720 0.030   NA
 7626212 7626213 SSUBM407_0852 SSUBM407_0853     FALSE 0.158 144.000 0.000 NA   NA
 7626215 7626216 SSUBM407_0855 SSUBM407_0856 gyrA srtA TRUE 0.875 7.000 0.013 NA N NA
 7626216 7626217 SSUBM407_0856 SSUBM407_0857 srtA radC FALSE 0.243 113.000 0.028 NA N NA
 7626218 7626219 SSUBM407_0858 SSUBM407_0859   rex TRUE 0.993 4.000 0.714 1.000   NA
 7626219 7626220 SSUBM407_0859 SSUBM407_0860 rex   TRUE 0.576 135.000 0.214 NA   NA
 7626220 7626221 SSUBM407_0860 SSUBM407_0861     TRUE 0.968 2.000 0.083 NA   NA
 7626221 7626222 SSUBM407_0861 SSUBM407_0862     TRUE 0.980 2.000 0.166 NA   NA
 7626222 7626223 SSUBM407_0862 SSUBM407_0863   prsA2 TRUE 0.984 11.000 0.089 1.000 Y NA
 7626223 7626224 SSUBM407_0863 SSUBM407_0864 prsA2   TRUE 0.475 145.000 0.145 1.000   NA
 7626225 7626226 SSUBM407_0865 SSUBM407_0866   ppnK TRUE 0.994 -16.000 0.725 1.000   NA
 7626226 7626227 SSUBM407_0866 SSUBM407_0867 ppnK   TRUE 0.970 0.000 0.150 1.000 N NA
 7626227 7626228 SSUBM407_0867 SSUBM407_0868   pta TRUE 0.893 18.000 0.067 1.000 N NA
 7626228 7626229 SSUBM407_0868 SSUBM407_0869 pta   TRUE 0.776 2.000 0.000 1.000 N NA
 7626229 7626230 SSUBM407_0869 SSUBM407_0870     TRUE 0.999 -13.000 0.895 0.011 Y NA
 7626230 7626231 SSUBM407_0870 SSUBM407_0871     TRUE 0.788 -10.000 0.000 NA N NA
 7626231 7626232 SSUBM407_0871 SSUBM407_0872   mutY FALSE 0.039 208.000 0.000 NA N NA
 7626234 7626235 SSUBM407_0874 SSUBM407_0875     FALSE 0.156 146.000 0.000 NA   NA
 7626236 7626237 SSUBM407_0876 SSUBM407_0877     FALSE 0.235 91.000 0.000 NA   NA
 7626237 7626238 SSUBM407_0877 SSUBM407_0878     FALSE 0.238 89.000 0.000 NA   NA
 7626239 7626240 SSUBM407_0879 SSUBM407_0880 lacR1   TRUE 0.753 23.000 0.000 NA   NA
 7626240 7626241 SSUBM407_0880 SSUBM407_0881   lacA1 TRUE 0.915 -3.000 0.000 NA   NA
 7626241 7626242 SSUBM407_0881 SSUBM407_0882 lacA1 lacB1 TRUE 0.928 27.000 0.000 0.002 Y NA
 7626242 7626243 SSUBM407_0882 SSUBM407_0883 lacB1 lacC1 TRUE 0.861 10.000 0.000 NA   NA
 7626243 7626244 SSUBM407_0883 SSUBM407_0884 lacC1 lacD1 TRUE 0.897 2.000 0.000 NA   NA
 7626244 7626245 SSUBM407_0884 SSUBM407_0885 lacD1 lacT FALSE 0.108 189.000 0.000 1.000   NA
 7626245 7626246 SSUBM407_0885 SSUBM407_0886 lacT lacF1 TRUE 0.938 32.000 0.250 1.000   NA
 7626246 7626247 SSUBM407_0886 SSUBM407_0887 lacF1 lacE1 TRUE 0.995 0.000 0.150 0.015 Y NA
 7626247 7626248 SSUBM407_0887 SSUBM407_0888 lacE1 lacG1 FALSE 0.214 245.000 0.000 1.000 Y NA
 7626248 7626249 SSUBM407_0888 SSUBM407_0889 lacG1 lacX1 TRUE 0.612 65.000 0.000 1.000 Y NA
 7626249 7626250 SSUBM407_0889 SSUBM407_0890 lacX1   FALSE 0.041 336.000 0.000 NA   NA
 7626255 7626256 SSUBM407_0895 SSUBM407_0896 glnQ1   TRUE 0.996 0.000 0.326 1.000 Y NA
 7626257 7626258 SSUBM407_0897 SSUBM407_0898 uvrB   TRUE 0.887 3.000 0.000 NA   NA
 7626258 7626259 SSUBM407_0898 SSUBM407_0899   uvrB TRUE 0.643 34.000 0.000 NA   NA
 7626259 7626260 SSUBM407_0899 SSUBM407_0900 uvrB zmpC FALSE 0.129 173.000 0.000 NA   NA
 7626260 7626261 SSUBM407_0900 SSUBM407_0901 zmpC   FALSE 0.197 111.000 0.000 1.000   NA
 7626261 7626262 SSUBM407_0901 SSUBM407_0902     TRUE 0.957 -7.000 0.021 1.000   NA
 7626262 7626263 SSUBM407_0902 SSUBM407_0903     FALSE 0.212 200.000 0.111 1.000 N NA
 7626263 7626264 SSUBM407_0903 SSUBM407_0904     TRUE 0.450 172.000 0.000 0.002 Y NA
 7626265 7626266 SSUBM407_0905 SSUBM407_0906 glgB glgA TRUE 0.566 73.000 0.000 1.000 Y NA
 7626266 7626267 SSUBM407_0906 SSUBM407_0907 glgA glgC TRUE 0.861 9.000 0.000 NA   NA
 7626267 7626268 SSUBM407_0907 SSUBM407_0908 glgC glgC TRUE 0.857 13.000 0.000 NA   NA
 7626268 7626269 SSUBM407_0908 SSUBM407_0909 glgC   FALSE 0.059 164.000 0.000 1.000 N NA
 7626270 7626271 SSUBM407_0910 SSUBM407_0911 pyrK pyrD TRUE 0.986 10.000 0.592 1.000 N NA
 7626271 7626272 SSUBM407_0911 SSUBM407_0912 pyrD pyrF TRUE 0.757 165.000 0.154 0.003 Y NA
 7626272 7626273 SSUBM407_0912 SSUBM407_0913 pyrF   TRUE 0.942 -7.000 0.003 1.000   NA
 7626273 7626274 SSUBM407_0913 SSUBM407_0914   pyrE FALSE 0.244 138.000 0.004 1.000   NA
 7626274 7626275 SSUBM407_0914 SSUBM407_0915 pyrE   FALSE 0.093 109.000 0.000 NA N NA
 7626275 7626276 SSUBM407_0915 SSUBM407_0916   ung TRUE 0.715 10.000 0.000 NA N NA
 7626276 7626277 SSUBM407_0916 SSUBM407_0917 ung pyrC TRUE 0.577 40.000 0.009 1.000 N NA
 7626277 7626278 SSUBM407_0917 SSUBM407_0918 pyrC sntC TRUE 0.559 110.000 0.005 1.000 Y NA
 7626278 7626279 SSUBM407_0918 SSUBM407_0919 sntC   FALSE 0.238 52.000 0.000 NA N NA
 7626279 7626280 SSUBM407_0919 SSUBM407_0920     TRUE 0.435 52.000 0.000 NA   NA
 7626280 7626281 SSUBM407_0920 SSUBM407_0921     FALSE 0.218 100.000 0.000 NA   NA
 7626281 7626282 SSUBM407_0921 SSUBM407_0922   rnh TRUE 0.976 -13.000 0.148 1.000   NA
 7626282 7626283 SSUBM407_0922 SSUBM407_0923 rnh   TRUE 0.887 3.000 0.000 NA   NA
 7626284 7626285 SSUBM407_0924 SSUBM407_0925     TRUE 0.978 -10.000 0.146 NA   NA
 7626285 7626286 SSUBM407_0925 SSUBM407_0926     FALSE 0.204 108.000 0.000 NA   NA
 7626286 7626287 SSUBM407_0926 SSUBM407_0927     TRUE 0.983 -3.000 0.163 NA   NA
 7626288 7626289 SSUBM407_0928 SSUBM407_0929   maa TRUE 0.867 11.000 0.000 NA   NA
 7626289 7626290 SSUBM407_0929 SSUBM407_0930 maa   TRUE 0.493 59.000 0.005 1.000   NA
 7626290 7626291 SSUBM407_0930 SSUBM407_0931   topA TRUE 0.844 93.000 0.238 1.000 Y NA
 7626291 7626292 SSUBM407_0931 SSUBM407_0932 topA rplJ FALSE 0.008 577.000 0.000 1.000 N NA
 7626292 7626293 SSUBM407_0932 SSUBM407_0933 rplJ rplL TRUE 0.977 66.000 0.884 0.024 Y NA
 7626293 7626294 SSUBM407_0933 SSUBM407_0933a rplL   FALSE 0.098 199.000 0.000 NA   NA
 7626294 7626295 SSUBM407_0933a SSUBM407_0934     TRUE 0.915 -3.000 0.000 NA   NA
 7626295 7626296 SSUBM407_0934 SSUBM407_0935     FALSE 0.154 149.000 0.000 NA   NA
 7626296 7626297 SSUBM407_0935 SSUBM407_0936     TRUE 0.993 -16.000 0.667 NA   NA
 7626297 7626298 SSUBM407_0936 SSUBM407_0937     TRUE 0.992 11.000 0.667 NA   NA
 7626298 7626299 SSUBM407_0937 SSUBM407_0938     TRUE 0.861 9.000 0.000 NA   NA
 7626299 7626300 SSUBM407_0938 SSUBM407_0939     TRUE 0.887 3.000 0.000 NA   NA
 7626300 7626301 SSUBM407_0939 SSUBM407_0940     FALSE 0.253 78.000 0.000 NA   NA
 7626301 7626302 SSUBM407_0940 SSUBM407_0941     TRUE 0.912 0.000 0.000 NA   NA
 7626302 7626303 SSUBM407_0941 SSUBM407_0942     TRUE 0.820 18.000 0.000 NA   NA
 7626303 7626304 SSUBM407_0942 SSUBM407_0943     TRUE 0.805 19.000 0.000 NA   NA
 7626304 7626305 SSUBM407_0943 SSUBM407_0944     FALSE 0.338 62.000 0.000 NA   NA
 7626305 7626306 SSUBM407_0944 SSUBM407_0945     TRUE 0.869 -22.000 0.000 NA   NA
 7626306 7626307 SSUBM407_0945 SSUBM407_0946     TRUE 0.897 2.000 0.000 NA   NA
 7626308 7626309 SSUBM407_0947 SSUBM407_0948     TRUE 0.970 -3.000 0.061 NA   NA
 7626310 7626311 SSUBM407_0949 SSUBM407_0949a     TRUE 0.905 1.000 0.000 NA   NA
 7626311 7626312 SSUBM407_0949a SSUBM407_0950     TRUE 0.879 -16.000 0.000 NA   NA
 7626312 7626313 SSUBM407_0950 SSUBM407_0951     TRUE 0.467 50.000 0.000 NA   NA
 7626313 7626314 SSUBM407_0951 SSUBM407_0951a     TRUE 0.878 4.000 0.000 NA   NA
 7626314 7626315 SSUBM407_0951a SSUBM407_0952   ermB FALSE 0.069 257.000 0.000 NA   NA
 7626315 7626316 SSUBM407_0952 SSUBM407_0953 ermB   FALSE 0.024 472.000 0.000 NA   NA
 7626316 7626317 SSUBM407_0953 SSUBM407_0954   tetO FALSE 0.034 367.000 0.000 NA   NA
 7626318 7626319 SSUBM407_0954a SSUBM407_0955   aadE TRUE 0.544 44.000 0.000 NA   NA
 7626319 7626320 SSUBM407_0955 SSUBM407_0956 aadE   TRUE 0.654 33.000 0.000 NA   NA
 7626320 7626321 SSUBM407_0956 SSUBM407_0957     TRUE 0.428 127.000 0.000 1.000 Y NA
 7626321 7626322 SSUBM407_0957 SSUBM407_0958     FALSE 0.097 103.000 0.000 1.000 N NA
 7626322 7626323 SSUBM407_0958 SSUBM407_0959     FALSE 0.202 108.000 0.000 1.000   NA
 7626323 7626324 SSUBM407_0959 SSUBM407_0960     TRUE 0.842 15.000 0.000 1.000   NA
 7626324 7626325 SSUBM407_0960 SSUBM407_0960a     FALSE 0.159 143.000 0.000 NA   NA
 7626326 7626327 SSUBM407_0960b SSUBM407_0960c     TRUE 0.878 4.000 0.000 NA   NA
 7626329 7626330 SSUBM407_0961 SSUBM407_0962     TRUE 0.604 39.000 0.000 NA   NA
 7626330 7626331 SSUBM407_0962 SSUBM407_0963     TRUE 0.415 54.000 0.000 NA   NA
 7626331 7626332 SSUBM407_0963 SSUBM407_0964     TRUE 0.915 -3.000 0.000 NA   NA
 7626332 7626333 SSUBM407_0964 SSUBM407_0965     TRUE 0.892 -13.000 0.000 NA   NA
 7626333 7626334 SSUBM407_0965 SSUBM407_0966     FALSE 0.289 70.000 0.000 NA   NA
 7626334 7626335 SSUBM407_0966 SSUBM407_0967     TRUE 0.974 0.000 0.095 1.000   NA
 7626335 7626336 SSUBM407_0967 SSUBM407_0968     TRUE 0.915 -3.000 0.000 NA   NA
 7626336 7626337 SSUBM407_0968 SSUBM407_0969     TRUE 0.996 -13.000 0.415 NA Y NA
 7626337 7626338 SSUBM407_0969 SSUBM407_0970     FALSE 0.018 756.000 0.000 NA   NA
 7626338 7626339 SSUBM407_0970 SSUBM407_0971     TRUE 0.837 16.000 0.000 NA   NA
 7626339 7626340 SSUBM407_0971 SSUBM407_0972     TRUE 0.686 29.000 0.000 NA   NA
 7626340 7626341 SSUBM407_0972 SSUBM407_0973     FALSE 0.121 179.000 0.000 1.000   NA
 7626341 7626342 SSUBM407_0973 SSUBM407_0974     TRUE 0.559 43.000 0.000 NA   NA
 7626342 7626343 SSUBM407_0974 SSUBM407_0975     FALSE 0.192 117.000 0.000 NA   NA
 7626343 7626344 SSUBM407_0975 SSUBM407_0976     TRUE 0.866 -25.000 0.000 NA   NA
 7626344 7626345 SSUBM407_0976 SSUBM407_0977     TRUE 0.879 -16.000 0.000 NA   NA
 7626345 7626346 SSUBM407_0977 SSUBM407_0979     FALSE 0.016 1918.000 0.000 NA   NA
 7626346 7626347 SSUBM407_0979 SSUBM407_0980   cat FALSE 0.073 137.000 0.000 1.000 N NA
 7626347 7626348 SSUBM407_0980 SSUBM407_0981 cat   FALSE 0.009 524.000 0.000 NA N NA
 7626348 7626349 SSUBM407_0981 SSUBM407_0982     TRUE 0.915 -3.000 0.000 NA   NA
 7626349 7626350 SSUBM407_0982 SSUBM407_0983   tetM2 FALSE 0.032 377.000 0.000 NA   NA
 7626350 7626351 SSUBM407_0983 SSUBM407_0984 tetM2 tetL FALSE 0.097 194.000 0.000 0.005 N NA
 7626351 7626352 SSUBM407_0984 SSUBM407_0985 tetL pre FALSE 0.021 564.000 0.000 1.000   NA
 7626354 7626355 SSUBM407_0987 SSUBM407_0987a     TRUE 0.915 -3.000 0.000 NA   NA
 7626355 7626356 SSUBM407_0987a SSUBM407_0988     FALSE 0.025 461.000 0.000 NA   NA
 7626356 7626357 SSUBM407_0988 SSUBM407_0989     FALSE 0.245 82.000 0.000 NA   NA
 7626357 7626358 SSUBM407_0989 SSUBM407_0991     FALSE 0.016 1383.000 0.000 NA   NA
 7626358 7626359 SSUBM407_0991 SSUBM407_0992     TRUE 0.912 0.000 0.000 NA   NA
 7626359 7626360 SSUBM407_0992 SSUBM407_0993     TRUE 0.892 -13.000 0.000 NA   NA
 7626360 7626361 SSUBM407_0993 SSUBM407_0995     FALSE 0.009 563.000 0.000 NA N NA
 7626361 7626362 SSUBM407_0995 SSUBM407_0996     TRUE 0.954 13.000 0.000 1.000 Y NA
 7626362 7626363 SSUBM407_0996 SSUBM407_0997     TRUE 0.992 -7.000 0.462 NA   NA
 7626363 7626364 SSUBM407_0997 SSUBM407_0998     TRUE 0.995 -3.000 0.667 NA   NA
 7626364 7626365 SSUBM407_0998 SSUBM407_0999     TRUE 0.855 31.000 0.056 NA   NA
 7626365 7626366 SSUBM407_0999 SSUBM407_1000     TRUE 0.998 -15.000 0.741 0.011 Y NA
 7626366 7626367 SSUBM407_1000 SSUBM407_1001     FALSE 0.042 330.000 0.000 1.000   NA
 7626367 7626368 SSUBM407_1001 SSUBM407_1002     FALSE 0.060 279.000 0.000 NA   NA
 7626368 7626369 SSUBM407_1002 SSUBM407_1003     TRUE 0.955 23.000 0.222 NA   NA
 7626369 7626370 SSUBM407_1003 SSUBM407_1004     FALSE 0.113 185.000 0.000 1.000   NA
 7626370 7626371 SSUBM407_1004 SSUBM407_1005     FALSE 0.099 196.000 0.000 1.000   NA
 7626371 7626372 SSUBM407_1005 SSUBM407_1006     FALSE 0.266 74.000 0.000 1.000   NA
 7626372 7626373 SSUBM407_1006 SSUBM407_1007     FALSE 0.314 65.000 0.000 NA   NA
 7626373 7626374 SSUBM407_1007 SSUBM407_1008     FALSE 0.196 114.000 0.000 NA   NA
 7626374 7626375 SSUBM407_1008 SSUBM407_1009     TRUE 0.859 31.000 0.059 NA   NA
 7626375 7626376 SSUBM407_1009 SSUBM407_1010     TRUE 0.954 18.000 0.130 NA   NA
 7626376 7626377 SSUBM407_1010 SSUBM407_1011     FALSE 0.161 140.000 0.000 NA   NA
 7626377 7626378 SSUBM407_1011 SSUBM407_1012     TRUE 0.857 13.000 0.000 NA   NA
 7626378 7626379 SSUBM407_1012 SSUBM407_1013     TRUE 0.779 21.000 0.000 NA   NA
 7626379 7626380 SSUBM407_1013 SSUBM407_1014     TRUE 0.997 2.000 1.000 NA   NA
 7626380 7626381 SSUBM407_1014 SSUBM407_1015     TRUE 0.977 2.000 0.143 NA   NA
 7626381 7626382 SSUBM407_1015 SSUBM407_1016     FALSE 0.166 136.000 0.000 NA   NA
 7626382 7626383 SSUBM407_1016 SSUBM407_1017     TRUE 0.996 1.000 0.855 1.000   NA
 7626383 7626384 SSUBM407_1017 SSUBM407_1018     FALSE 0.233 92.000 0.000 NA   NA
 7626384 7626385 SSUBM407_1018 SSUBM407_1019     TRUE 0.988 -16.000 0.400 NA   NA
 7626385 7626386 SSUBM407_1019 SSUBM407_1020     TRUE 0.382 39.000 0.000 NA N NA
 7626386 7626387 SSUBM407_1020 SSUBM407_1021     TRUE 0.998 -3.000 0.812 1.000 Y NA
 7626387 7626388 SSUBM407_1021 SSUBM407_1022     FALSE 0.123 76.000 0.000 1.000 N NA
 7626389 7626390 SSUBM407_1023 SSUBM407_1024     FALSE 0.037 359.000 0.000 NA   NA
 7626390 7626391 SSUBM407_1024 SSUBM407_1025     FALSE 0.019 651.000 0.000 NA   NA
 7626391 7626392 SSUBM407_1025 SSUBM407_1026     FALSE 0.314 65.000 0.000 NA   NA
 7626392 7626393 SSUBM407_1026 SSUBM407_1027     TRUE 0.982 4.000 0.250 NA   NA
 7626393 7626394 SSUBM407_1027 SSUBM407_1028   ffh FALSE 0.154 194.000 0.002 NA   NA
 7626394 7626395 SSUBM407_1028 SSUBM407_1029 ffh   TRUE 0.969 13.000 0.151 1.000   NA
 7626395 7626396 SSUBM407_1029 SSUBM407_1030     TRUE 0.475 103.000 0.032 0.034   NA
 7626398 7626399 SSUBM407_1032 SSUBM407_1033     TRUE 0.993 -3.000 0.490 NA   NA
 7626400 7626401 SSUBM407_1034 SSUBM407_1035     FALSE 0.191 118.000 0.000 NA   NA
 7626402 7626403 SSUBM407_1036 SSUBM407_1037     TRUE 0.767 22.000 0.000 NA   NA
 7626403 7626404 SSUBM407_1037 SSUBM407_1038     TRUE 0.831 17.000 0.000 NA   NA
 7626404 7626405 SSUBM407_1038 SSUBM407_1039     FALSE 0.216 101.000 0.000 NA   NA
 7626405 7626406 SSUBM407_1039 SSUBM407_1040     TRUE 0.977 1.000 0.128 NA   NA
 7626406 7626407 SSUBM407_1040 SSUBM407_1041   glyA TRUE 0.976 0.000 0.103 NA   NA
 7626407 7626408 SSUBM407_1041 SSUBM407_1042 glyA   TRUE 0.890 24.000 0.056 1.000   NA
 7626408 7626409 SSUBM407_1042 SSUBM407_1043     TRUE 0.955 -3.000 0.012 NA   NA
 7626409 7626410 SSUBM407_1043 SSUBM407_1044     TRUE 0.985 -7.000 0.029 NA Y NA
 7626410 7626411 SSUBM407_1044 SSUBM407_1045   prfA TRUE 0.990 0.000 0.084 1.000 Y NA
 7626411 7626412 SSUBM407_1045 SSUBM407_1046 prfA tdk FALSE 0.045 451.000 0.062 1.000 N NA
 7626412 7626413 SSUBM407_1046 SSUBM407_1047 tdk   TRUE 0.831 17.000 0.000 NA   NA
 7626413 7626414 SSUBM407_1047 SSUBM407_1048     FALSE 0.101 195.000 0.000 NA   NA
 7626416 7626417 SSUBM407_1050 SSUBM407_1051 lepA   FALSE 0.056 282.000 0.000 NA   NA
 7626417 7626418 SSUBM407_1051 SSUBM407_1052   ndk FALSE 0.210 104.000 0.000 NA   NA
 7626418 7626419 SSUBM407_1052 SSUBM407_1053 ndk engB TRUE 0.751 23.000 0.000 1.000   NA
 7626419 7626420 SSUBM407_1053 SSUBM407_1054 engB clpX TRUE 0.626 56.000 0.043 1.000   NA
 7626420 7626421 SSUBM407_1054 SSUBM407_1055 clpX   TRUE 0.863 22.000 0.012 NA   NA
 7626421 7626422 SSUBM407_1055 SSUBM407_1056   dyr TRUE 0.949 3.000 0.030 NA   NA
 7626422 7626423 SSUBM407_1056 SSUBM407_1057 dyr thyA FALSE 0.250 286.000 0.295 1.000 N NA
 7626423 7626424 SSUBM407_1057 SSUBM407_1058 thyA   TRUE 0.424 53.000 0.000 NA   NA
 7626424 7626425 SSUBM407_1058 SSUBM407_1059     TRUE 0.865 12.000 0.000 NA   NA
 7626425 7626426 SSUBM407_1059 SSUBM407_1060   glkA1 FALSE 0.180 126.000 0.000 NA   NA
 7626426 7626427 SSUBM407_1060 SSUBM407_1061 glkA1   FALSE 0.227 96.000 0.000 NA   NA
 7626427 7626428 SSUBM407_1061 SSUBM407_1062     TRUE 0.905 1.000 0.000 NA   NA
 7626428 7626429 SSUBM407_1062 SSUBM407_1063   cca TRUE 0.966 -7.000 0.056 1.000   NA
 7626429 7626430 SSUBM407_1063 SSUBM407_1064 cca dapB TRUE 0.924 -3.000 0.015 1.000 N NA
 7626430 7626431 SSUBM407_1064 SSUBM407_1065 dapB   TRUE 0.911 9.000 0.004 NA   NA
 7626431 7626432 SSUBM407_1065 SSUBM407_1066     TRUE 0.976 2.000 0.139 NA   NA
 7626432 7626433 SSUBM407_1066 SSUBM407_1067   fruA TRUE 0.392 96.000 0.022 1.000   NA
 7626433 7626434 SSUBM407_1067 SSUBM407_1068 fruA fruK TRUE 0.998 -3.000 0.816 1.000 Y NA
 7626434 7626435 SSUBM407_1068 SSUBM407_1069 fruK   TRUE 0.998 -3.000 0.721 1.000 Y NA
 7626435 7626436 SSUBM407_1069 SSUBM407_1070   hisC FALSE 0.098 102.000 0.000 1.000 N NA
 7626436 7626437 SSUBM407_1070 SSUBM407_1071 hisC trmD TRUE 0.741 4.000 0.000 1.000 N NA
 7626437 7626438 SSUBM407_1071 SSUBM407_1072 trmD rimM TRUE 0.998 -10.000 0.672 1.000 Y NA
 7626438 7626439 SSUBM407_1072 SSUBM407_1073a rimM mdtK FALSE 0.222 98.000 0.000 NA   NA
 7626439 10784649 SSUBM407_1073a SSUBM407_1073 mdtK   TRUE 0.857 -1315.000 0.000 NA   NA
 10784649 7626440 SSUBM407_1073 SSUBM407_1074     FALSE 0.212 103.000 0.000 NA   NA
 7626440 7626441 SSUBM407_1074 SSUBM407_1075   nth FALSE 0.054 286.000 0.000 1.000   NA
 7626445 7626446 SSUBM407_1079 SSUBM407_1080   potD FALSE 0.302 114.000 0.022 0.063 N NA
 7626446 7626447 SSUBM407_1080 SSUBM407_1081 potD potC TRUE 0.996 0.000 0.253 0.028 Y NA
 7626447 7626448 SSUBM407_1081 SSUBM407_1082 potC potB TRUE 0.998 0.000 0.492 0.028 Y NA
 7626448 7626449 SSUBM407_1082 SSUBM407_1083 potB potA TRUE 0.999 -16.000 0.928 0.028 Y NA
 7626449 7626450 SSUBM407_1083 SSUBM407_1084 potA murB TRUE 0.694 39.000 0.041 1.000 N NA
 7626450 7626451 SSUBM407_1084 SSUBM407_1085 murB thrB FALSE 0.033 235.000 0.000 1.000 N NA
 7626451 7626452 SSUBM407_1085 SSUBM407_1086 thrB hom TRUE 0.980 4.000 0.036 1.000 Y NA
 7626454 7626455 SSUBM407_1088 SSUBM407_1089     TRUE 0.998 9.000 0.846 0.010 Y NA
 7626455 7626456 SSUBM407_1089 SSUBM407_1090     FALSE 0.258 76.000 0.000 1.000   NA
 7626456 7626457 SSUBM407_1090 SSUBM407_1091   rpsP TRUE 0.973 22.000 0.385 1.000   NA
 7626457 7626458 SSUBM407_1091 SSUBM407_1092 rpsP   FALSE 0.184 124.000 0.000 NA   NA
 7626458 7626459 SSUBM407_1092 SSUBM407_1093   pcp TRUE 0.865 12.000 0.000 NA   NA
 7626459 7626460 SSUBM407_1093 SSUBM407_1094 pcp   TRUE 0.915 -3.000 0.000 NA   NA
 7626460 7626461 SSUBM407_1094 SSUBM407_1095   carB FALSE 0.323 64.000 0.000 NA   NA
 7626461 7626462 SSUBM407_1095 SSUBM407_1096 carB carA TRUE 0.391 360.000 0.117 0.001 Y NA
 7626462 7626463 SSUBM407_1096 SSUBM407_1097 carA pyrB FALSE 0.309 248.000 0.014 1.000 Y NA
 7626463 7626464 SSUBM407_1097 SSUBM407_1098 pyrB pyrR TRUE 0.922 56.000 0.247 1.000 Y NA
 7626464 7626465 SSUBM407_1098 SSUBM407_1099 pyrR   FALSE 0.098 199.000 0.000 NA   NA
 7626465 7626466 SSUBM407_1099 SSUBM407_1100     TRUE 0.646 48.000 0.011 NA   NA
 7626466 7626467 SSUBM407_1100 SSUBM407_1101     FALSE 0.115 81.000 0.000 1.000 N NA
 7626467 7626468 SSUBM407_1101 SSUBM407_1102b   lspA TRUE 0.938 -16.000 0.082 1.000 N NA
 7626468 10784650 SSUBM407_1102b SSUBM407_1102 lspA   TRUE 0.858 -458.000 0.000 NA   NA
 10784650 7626469 SSUBM407_1102 SSUBM407_1103   cpsY TRUE 0.910 -7.000 0.000 NA   NA
 7626469 7626470 SSUBM407_1103 SSUBM407_1104 cpsY   TRUE 0.630 36.000 0.000 NA   NA
 7626470 7626471 SSUBM407_1104 SSUBM407_1105   rpmA FALSE 0.106 192.000 0.000 NA   NA
 7626471 7626472 SSUBM407_1105 SSUBM407_1106 rpmA rplU TRUE 0.985 47.000 0.667 0.023 Y NA
 7626472 7626473 SSUBM407_1106 SSUBM407_1107 rplU brnQ FALSE 0.046 191.000 0.000 1.000 N NA
 7626473 7626474 SSUBM407_1107 SSUBM407_1108 brnQ thiI FALSE 0.083 122.000 0.000 1.000 N NA
 7626474 7626475 SSUBM407_1108 SSUBM407_1109 thiI   TRUE 0.983 2.000 0.349 1.000 N NA
 7626476 7626477 SSUBM407_1110 SSUBM407_1111     TRUE 0.344 61.000 0.000 NA   NA
 7626478 7626479 SSUBM407_1112 SSUBM407_t0046     FALSE 0.338 62.000 0.000 NA   NA
 7626479 7626480 SSUBM407_t0046 SSUBM407_1113     TRUE 0.617 38.000 0.000 NA   NA
 7626480 7626481 SSUBM407_1113 SSUBM407_t0047     FALSE 0.184 124.000 0.000 NA   NA
 7626481 7626482 SSUBM407_t0047 SSUBM407_t0048     FALSE 0.061 276.000 0.000 NA   NA
 7626482 7626483 SSUBM407_t0048 SSUBM407_1114     TRUE 0.435 52.000 0.000 NA   NA
 7626483 7626484 SSUBM407_1114 SSUBM407_1115     TRUE 0.612 67.000 0.095 NA   NA
 7626484 7626485 SSUBM407_1115 SSUBM407_1116     FALSE 0.199 111.000 0.000 NA   NA
 7626485 7626486 SSUBM407_1116 SSUBM407_1117   parC FALSE 0.331 63.000 0.000 NA   NA
 7626486 7626487 SSUBM407_1117 SSUBM407_1118 parC   FALSE 0.095 201.000 0.000 NA   NA
 7626487 7626488 SSUBM407_1118 SSUBM407_1119     TRUE 0.887 3.000 0.000 NA   NA
 7626488 7626489 SSUBM407_1119 SSUBM407_1120     TRUE 0.654 33.000 0.000 NA   NA
 7626489 7626490 SSUBM407_1120 SSUBM407_1121     TRUE 0.739 24.000 0.000 NA   NA
 7626490 7626491 SSUBM407_1121 SSUBM407_1122     TRUE 0.424 53.000 0.000 NA   NA
 7626491 7626492 SSUBM407_1122 SSUBM407_1123   parE TRUE 0.827 30.000 0.025 NA   NA
 7626494 7626495 SSUBM407_1125 SSUBM407_1126   mrp FALSE 0.293 69.000 0.000 NA   NA
 7626495 7626496 SSUBM407_1126 SSUBM407_1127 mrp   FALSE 0.035 364.000 0.000 NA   NA
 7626496 7626497 SSUBM407_1127 SSUBM407_1128     FALSE 0.057 374.000 0.009 NA   NA
 7626497 7626498 SSUBM407_1128 SSUBM407_1129     FALSE 0.161 204.000 0.011 NA   NA
 7626498 7626499 SSUBM407_1129 SSUBM407_1130   uvrC TRUE 0.381 57.000 0.000 NA   NA
 7626500 7626501 SSUBM407_1131 SSUBM407_1132     TRUE 0.991 -3.000 0.341 NA   NA
 7626502 7626503 SSUBM407_1133 SSUBM407_1134     FALSE 0.238 89.000 0.000 NA   NA
 7626503 7626504 SSUBM407_1134 SSUBM407_1135     FALSE 0.038 351.000 0.000 NA   NA
 7626504 7626505 SSUBM407_1135 SSUBM407_1136     FALSE 0.074 243.000 0.000 NA   NA
 7626505 7626506 SSUBM407_1136 SSUBM407_1137     FALSE 0.250 79.000 0.000 NA   NA
 7626506 7626507 SSUBM407_1137 SSUBM407_1138     FALSE 0.019 622.000 0.000 1.000   NA
 7626507 7626508 SSUBM407_1138 SSUBM407_1139     TRUE 0.998 -3.000 0.667 0.028 Y NA
 7626508 7626509 SSUBM407_1139 SSUBM407_1140     TRUE 0.973 0.000 0.000 1.000 Y NA
 7626509 7626510 SSUBM407_1140 SSUBM407_1141     TRUE 0.791 20.000 0.000 NA   NA
 7626510 7626511 SSUBM407_1141 SSUBM407_1142     TRUE 0.946 5.000 0.039 NA   NA
 7626511 7626512 SSUBM407_1142 SSUBM407_1143     TRUE 0.936 12.000 0.098 NA N NA
 7626512 7626513 SSUBM407_1143 SSUBM407_1144   thiE FALSE 0.010 484.000 0.000 NA N NA
 7626513 7626514 SSUBM407_1144 SSUBM407_1145 thiE thiM TRUE 0.992 -7.000 0.061 0.003 Y NA
 7626514 7626515 SSUBM407_1145 SSUBM407_1146 thiM thiD TRUE 0.986 5.000 0.032 0.003 Y NA
 7626515 7626516 SSUBM407_1146 SSUBM407_1147 thiD   TRUE 0.914 -3.000 0.000 1.000   NA
 7626516 7626517 SSUBM407_1147 SSUBM407_m0007     FALSE 0.042 335.000 0.000 NA   NA
 7626517 7626518 SSUBM407_m0007 SSUBM407_1148   pcrA FALSE 0.331 63.000 0.000 NA   NA
 7626518 7626519 SSUBM407_1148 SSUBM407_1149 pcrA nox FALSE 0.078 289.000 0.000 0.050   NA
 7626519 7626520 SSUBM407_1149 SSUBM407_1150 nox   FALSE 0.113 185.000 0.000 1.000   NA
 7626522 7626523 SSUBM407_1152 SSUBM407_1153     TRUE 0.857 13.000 0.000 NA   NA
 7626523 7626524 SSUBM407_1153 SSUBM407_1154   glpF1 FALSE 0.171 132.000 0.000 NA   NA
 7626524 7626525 SSUBM407_1154 SSUBM407_1155 glpF1 glpO TRUE 0.981 14.000 0.500 1.000 N NA
 7626525 7626526 SSUBM407_1155 SSUBM407_1156 glpO glpK TRUE 0.947 76.000 0.500 0.001 Y NA
 7626526 7626527 SSUBM407_1156 SSUBM407_1157 glpK   TRUE 0.527 230.000 0.462 NA   NA
 7626527 7626528 SSUBM407_1157 SSUBM407_1158     TRUE 0.991 -10.000 0.462 NA   NA
 7626528 7626529 SSUBM407_1158 SSUBM407_1159   dapA FALSE 0.033 370.000 0.000 1.000   NA
 7626529 7626530 SSUBM407_1159 SSUBM407_1160 dapA asd TRUE 0.755 73.000 0.063 1.000 Y NA
 7626530 7626531 SSUBM407_1160 SSUBM407_1161 asd gldA FALSE 0.057 169.000 0.000 1.000 N NA
 7626531 7626532 SSUBM407_1161 SSUBM407_1162 gldA   TRUE 0.547 121.000 0.000 0.005 Y NA
 7626532 7626533 SSUBM407_1162 SSUBM407_1163   fsaA TRUE 0.443 32.000 0.000 1.000 N NA
 7626533 7626534 SSUBM407_1163 SSUBM407_1164 fsaA pflD TRUE 0.974 15.000 0.368 1.000 N NA
 7626534 7626535 SSUBM407_1164 SSUBM407_1165 pflD   FALSE 0.334 152.000 0.132 1.000 N NA
 7626535 7626536 SSUBM407_1165 SSUBM407_1166     TRUE 0.998 13.000 0.889 0.014 Y NA
 7626536 7626537 SSUBM407_1166 SSUBM407_1167     TRUE 0.995 33.000 0.889 0.014 Y NA
 7626537 7626538 SSUBM407_1167 SSUBM407_1168     FALSE 0.210 188.000 0.091 1.000 N NA
 7626538 7626539 SSUBM407_1168 SSUBM407_1169     TRUE 0.867 11.000 0.000 NA   NA
 7626541 7626542 SSUBM407_1171 SSUBM407_1172     TRUE 0.861 9.000 0.000 NA   NA
 7626542 7626543 SSUBM407_1172 SSUBM407_1173     TRUE 0.902 -10.000 0.000 NA   NA
 7626543 7626544 SSUBM407_1173 SSUBM407_1174     TRUE 0.954 1.000 0.021 NA   NA
 7626546 7626547 SSUBM407_1176 SSUBM407_1177     FALSE 0.148 153.000 0.000 NA   NA
 7626547 7626548 SSUBM407_1177 SSUBM407_1178     TRUE 0.910 -7.000 0.000 NA   NA
 7626548 7626549 SSUBM407_1178 SSUBM407_1179     TRUE 0.879 -16.000 0.000 NA   NA
 7626549 7626550 SSUBM407_1179 SSUBM407_1180     FALSE 0.107 93.000 0.000 1.000 N NA
 7626553 7626554 SSUBM407_1183 SSUBM407_1184 dpfB coaC TRUE 0.953 -7.000 0.013 1.000   NA
 7626554 7626555 SSUBM407_1184 SSUBM407_1185 coaC   TRUE 0.947 -13.000 0.019 NA   NA
 7626555 7626556 SSUBM407_1185 SSUBM407_1186   pgmA TRUE 0.536 91.000 0.098 NA   NA
 7626557 7626558 SSUBM407_1187 SSUBM407_1188     FALSE 0.084 222.000 0.000 NA   NA
 7626558 7626559 SSUBM407_1188 SSUBM407_1189     TRUE 0.878 4.000 0.000 NA   NA
 7626559 7626560 SSUBM407_1189 SSUBM407_1190     FALSE 0.016 1116.000 0.000 NA   NA
 7626560 7626561 SSUBM407_1190 SSUBM407_1191     TRUE 0.831 17.000 0.000 NA   NA
 7626563 7626564 SSUBM407_1193 SSUBM407_1194     FALSE 0.105 193.000 0.000 NA   NA
 7626564 7626565 SSUBM407_1194 SSUBM407_1195     FALSE 0.183 125.000 0.000 NA   NA
 7626565 7626566 SSUBM407_1195 SSUBM407_1196     FALSE 0.142 160.000 0.000 NA   NA
 7626567 7626568 SSUBM407_1197 SSUBM407_1198 exoA   FALSE 0.048 187.000 0.000 1.000 N NA
 7626569 7626570 SSUBM407_1199 SSUBM407_1200   ogt TRUE 0.920 -16.000 0.050 1.000 N NA
 7626570 7626571 SSUBM407_1200 SSUBM407_1201 ogt   TRUE 0.881 3.000 0.009 1.000 N NA
 7626571 7626572 SSUBM407_1201 SSUBM407_1202     TRUE 0.662 54.000 0.013 0.046   NA
 7626572 7626573 SSUBM407_1202 SSUBM407_1203   serC TRUE 0.952 0.000 0.012 1.000   NA
 7626573 7626574 SSUBM407_1203 SSUBM407_1204 serC   FALSE 0.024 470.000 0.000 1.000   NA
 7626574 7626575 SSUBM407_1204 SSUBM407_1205     TRUE 0.958 2.000 0.043 NA   NA
 7626575 7626576 SSUBM407_1205 SSUBM407_1206   holB TRUE 0.905 20.000 0.038 NA   NA
 7626576 7626577 SSUBM407_1206 SSUBM407_1207 holB tmk TRUE 0.982 -3.000 0.254 1.000 N NA
 7626579 7626580 SSUBM407_1209 SSUBM407_1210     TRUE 0.994 6.000 0.818 NA   NA
 7626580 7626581 SSUBM407_1210 SSUBM407_1211     FALSE 0.231 94.000 0.000 NA   NA
 7626581 7626582 SSUBM407_1211 SSUBM407_1212     FALSE 0.120 180.000 0.000 NA   NA
 7626582 7626583 SSUBM407_1212 SSUBM407_1213   comEC TRUE 0.831 17.000 0.000 NA   NA
 7626583 7626584 SSUBM407_1213 SSUBM407_1214 comEC comEA TRUE 0.970 -16.000 0.130 1.000   NA
 7626584 7626585 SSUBM407_1214 SSUBM407_1215 comEA   TRUE 0.349 63.000 0.014 1.000 N NA
 7626586 7626587 SSUBM407_1216 SSUBM407_1217 murE fhuC FALSE 0.238 152.000 0.062 1.000 N NA
 7626587 7626588 SSUBM407_1217 SSUBM407_1218 fhuC fhuD TRUE 0.998 13.000 0.889 1.000 Y NA
 7626588 7626589 SSUBM407_1218 SSUBM407_1219 fhuD fhuB TRUE 0.988 14.000 0.179 1.000 Y NA
 7626589 7626590 SSUBM407_1219 SSUBM407_1220 fhuB fhuG TRUE 0.999 -3.000 0.857 0.028 Y NA
 7626591 7626592 SSUBM407_1221 SSUBM407_1222     TRUE 0.693 14.000 0.000 1.000 N NA
 7626593 7626594 SSUBM407_1223 SSUBM407_1224     FALSE 0.274 73.000 0.000 NA   NA
 7626595 7626596 SSUBM407_1225 SSUBM407_1226 dltD dltC TRUE 0.991 -7.000 0.409 NA   NA
 7626596 7626597 SSUBM407_1226 SSUBM407_1227 dltC dltB TRUE 0.933 43.000 0.387 NA   NA
 7626597 7626598 SSUBM407_1227 SSUBM407_1228 dltB dltA TRUE 0.989 -3.000 0.435 NA N NA
 7626598 7626599 SSUBM407_1228 SSUBM407_1229 dltA   FALSE 0.019 615.000 0.000 NA   NA
 7626599 7626600 SSUBM407_1229 SSUBM407_1230     FALSE 0.201 110.000 0.000 NA   NA
 7626600 7626601 SSUBM407_1230 SSUBM407_1231     FALSE 0.027 432.000 0.000 NA   NA
 7626601 7626602 SSUBM407_1231 SSUBM407_1232     FALSE 0.030 399.000 0.000 NA   NA
 7626602 7626603 SSUBM407_1232 SSUBM407_1233   nagB FALSE 0.025 467.000 0.000 NA   NA
 7626604 7626605 SSUBM407_1234 SSUBM407_1235 queA argR FALSE 0.268 49.000 0.000 1.000 N NA
 7626606 7626607 SSUBM407_1236 SSUBM407_1237     FALSE 0.033 371.000 0.000 NA   NA
 7626607 7626608 SSUBM407_1237 SSUBM407_1238     FALSE 0.189 119.000 0.000 NA   NA
 7626608 7626609 SSUBM407_1238 SSUBM407_1239   arcC FALSE 0.040 343.000 0.000 NA   NA
 7626609 7626610 SSUBM407_1239 SSUBM407_1240 arcC arcB TRUE 0.746 118.000 0.146 1.000 Y NA
 7626610 7626611 SSUBM407_1240 SSUBM407_1241 arcB   TRUE 0.942 19.000 0.104 1.000   NA
 7626611 7626612 SSUBM407_1241 SSUBM407_1242   arcA TRUE 0.967 0.000 0.056 1.000   NA
 7626612 7626613 SSUBM407_1242 SSUBM407_1243 arcA   FALSE 0.028 261.000 0.000 1.000 N NA
 7626613 7626614 SSUBM407_1243 SSUBM407_1244     FALSE 0.055 286.000 0.000 NA   NA
 7626614 7626615 SSUBM407_1244 SSUBM407_1245     TRUE 0.993 -3.000 0.470 NA   NA
 7626615 7626616 SSUBM407_1245 SSUBM407_1246     TRUE 0.986 -3.000 0.214 NA   NA
 7626616 7626617 SSUBM407_1246 SSUBM407_1247     TRUE 0.900 22.000 0.051 NA   NA
 7626617 7626618 SSUBM407_1247 SSUBM407_1248     FALSE 0.249 51.000 0.000 NA N NA
 7626618 7626619 SSUBM407_1248 SSUBM407_1249     FALSE 0.012 406.000 0.000 NA N NA
 7626619 7626620 SSUBM407_1249 SSUBM407_1250     TRUE 0.997 -10.000 1.000 NA   NA
 7626620 7626621 SSUBM407_1250 SSUBM407_1251   asnS FALSE 0.065 272.000 0.000 NA   NA
 7626621 7626622 SSUBM407_1251 SSUBM407_1252 asnS aspC TRUE 0.910 15.000 0.068 1.000 N NA
 7626622 7626623 SSUBM407_1252 SSUBM407_1253 aspC   TRUE 0.986 -3.000 0.205 NA   NA
 7626623 7626624 SSUBM407_1253 SSUBM407_1254     TRUE 0.366 59.000 0.000 NA   NA
 7626624 7626625 SSUBM407_1254 SSUBM407_1255     TRUE 0.941 18.000 0.000 NA Y NA
 7626626 7626627 SSUBM407_1256 SSUBM407_1257     TRUE 0.851 63.000 0.414 1.000   NA
 7626630 7626631 SSUBM407_1260 SSUBM407_1261     TRUE 0.490 66.000 0.093 NA N NA
 7626631 7626632 SSUBM407_1261 SSUBM407_1262   pheA TRUE 0.891 12.000 0.025 NA N NA
 7626632 7626633 SSUBM407_1262 SSUBM407_1263 pheA aroK TRUE 0.984 -9.000 0.025 1.000 Y NA
 7626633 7626634 SSUBM407_1263 SSUBM407_1264 aroK aroA TRUE 0.972 9.000 0.012 1.000 Y NA
 7626638 7626639 SSUBM407_1268 SSUBM407_1269     TRUE 0.912 0.000 0.000 NA   NA
 7626639 7626640 SSUBM407_1269 SSUBM407_1270     FALSE 0.096 200.000 0.000 NA   NA
 7626640 7626641 SSUBM407_1270 SSUBM407_1271     FALSE 0.076 240.000 0.000 NA   NA
 7626641 7626642 SSUBM407_1271 SSUBM407_1272     TRUE 0.353 60.000 0.000 NA   NA
 7626642 7626643 SSUBM407_1272 SSUBM407_1273     TRUE 0.873 -19.000 0.000 NA   NA
 7626643 7626644 SSUBM407_1273 SSUBM407_1274     TRUE 0.624 37.000 0.000 NA   NA
 7626644 7626645 SSUBM407_1274 SSUBM407_1275     TRUE 0.849 38.000 0.000 NA Y NA
 7626645 7626646 SSUBM407_1275 SSUBM407_1276     FALSE 0.071 250.000 0.000 NA   NA
 7626646 7626647 SSUBM407_1276 SSUBM407_1277   neuA FALSE 0.099 197.000 0.000 NA   NA
 7626647 7626648 SSUBM407_1277 SSUBM407_1278 neuA   TRUE 0.924 9.000 0.013 1.000   NA
 7626648 7626649 SSUBM407_1278 SSUBM407_1279   neuC TRUE 0.918 14.000 0.013 1.000   NA
 7626649 7626650 SSUBM407_1279 SSUBM407_1280 neuC neuB TRUE 0.996 12.000 0.549 1.000 Y NA
 7626650 7626651 SSUBM407_1280 SSUBM407_1281 neuB   FALSE 0.022 523.000 0.000 1.000   NA
 7626651 7626652 SSUBM407_1281 SSUBM407_1282     TRUE 0.937 9.000 0.033 1.000   NA
 7626652 7626653 SSUBM407_1282 SSUBM407_1283     FALSE 0.218 100.000 0.000 NA   NA
 7626653 7626654 SSUBM407_1283 SSUBM407_1284     FALSE 0.113 186.000 0.000 NA   NA
 7626654 7626655 SSUBM407_1284 SSUBM407_1285     TRUE 0.630 36.000 0.000 NA   NA
 7626655 7626656 SSUBM407_1285 SSUBM407_1286     TRUE 0.559 43.000 0.000 NA   NA
 7626656 7626657 SSUBM407_1286 SSUBM407_1287   csp2K TRUE 0.589 40.000 0.000 NA   NA
 7626657 7626658 SSUBM407_1287 SSUBM407_1288 csp2K cps2J TRUE 0.910 -7.000 0.000 NA   NA
 7626658 7626659 SSUBM407_1288 SSUBM407_1289c cps2J wzy FALSE 0.162 139.000 0.000 NA   NA
 7626659 10784651 SSUBM407_1289c SSUBM407_1289 wzy   TRUE 0.857 -1127.000 0.000 NA   NA
 10784651 7626660 SSUBM407_1289 SSUBM407_1290   csp2H FALSE 0.297 68.000 0.000 NA   NA
 7626660 10784652 SSUBM407_1290 SSUBM407_1291 csp2H   FALSE 0.338 62.000 0.000 NA   NA
 10784652 7626661 SSUBM407_1291 SSUBM407_1292   csp2G FALSE 0.064 273.000 0.000 NA   NA
 7626661 7626662 SSUBM407_1292 SSUBM407_1293 csp2G cps2F TRUE 0.989 4.000 0.083 0.012 Y NA
 7626662 7626663 SSUBM407_1293 SSUBM407_1294 cps2F cps2E TRUE 0.936 35.000 0.067 NA Y NA
 7626663 7626664 SSUBM407_1294 SSUBM407_1295 cps2E wzh TRUE 0.901 25.000 0.000 NA Y NA
 7626664 7626665 SSUBM407_1295 SSUBM407_1296 wzh wze TRUE 0.377 39.000 0.000 1.000 N NA
 7626665 7626666 SSUBM407_1296 SSUBM407_1297 wze cps2B TRUE 0.990 10.000 0.800 1.000 N NA
 7626666 7626667 SSUBM407_1297 SSUBM407_1298 cps2B wzg TRUE 0.644 18.000 0.000 1.000 N NA
 7626667 7626668 SSUBM407_1298 SSUBM407_1299 wzg   FALSE 0.208 105.000 0.000 NA   NA
 7626672 7626673 SSUBM407_1303 SSUBM407_1304 proC proA TRUE 0.981 10.000 0.009 0.002 Y NA
 7626673 7626674 SSUBM407_1304 SSUBM407_1305 proA proB TRUE 0.933 65.000 0.281 0.002 Y NA
 7626674 7626675 SSUBM407_1305 SSUBM407_1306 proB   FALSE 0.062 160.000 0.000 1.000 N NA
 7626677 7626678 SSUBM407_1308 SSUBM407_1309     TRUE 0.570 42.000 0.000 NA   NA
 7626680 7626681 SSUBM407_1311 SSUBM407_1312     TRUE 0.979 21.000 0.154 1.000 Y NA
 7626681 7626682 SSUBM407_1312 SSUBM407_1313     TRUE 0.986 10.000 0.130 1.000 Y NA
 7626682 7626683 SSUBM407_1313 SSUBM407_1314   glmS FALSE 0.065 152.000 0.000 1.000 N NA
 7626683 7626684 SSUBM407_1314 SSUBM407_1315 glmS sipC FALSE 0.184 190.000 0.011 1.000   NA
 7626684 7626685 SSUBM407_1315 SSUBM407_1316 sipC   TRUE 0.556 43.000 0.000 1.000   NA
 7626687 7626688 SSUBM407_1318 SSUBM407_1319   pyk FALSE 0.139 161.000 0.000 1.000   NA
 7626688 7626689 SSUBM407_1319 SSUBM407_1320 pyk pfk TRUE 0.922 67.000 0.261 0.005 Y NA
 7626689 7626690 SSUBM407_1320 SSUBM407_1321 pfk dnaE TRUE 0.424 85.000 0.098 1.000 N NA
 7626691 7626692 SSUBM407_1322 SSUBM407_1323     TRUE 0.987 -7.000 0.412 1.000 N NA
 7626692 7626693 SSUBM407_1323 SSUBM407_1324     TRUE 0.984 17.000 0.471 NA   NA
 7626696 7626697 SSUBM407_t0049 SSUBM407_m0008   ssrA TRUE 0.870 6.000 0.000 NA   NA
 7626701 7626702 SSUBM407_1330 SSUBM407_1331   rpoD FALSE 0.289 169.000 0.044 NA   NA
 7626702 7626703 SSUBM407_1331 SSUBM407_1332 rpoD dnaG TRUE 0.970 3.000 0.209 1.000 N NA
 7626705 7626706 SSUBM407_1334 SSUBM407_1335 galE rpsU FALSE 0.208 104.000 0.000 1.000   NA
 7626706 7626707 SSUBM407_1335 SSUBM407_1336 rpsU   FALSE 0.220 99.000 0.000 NA   NA
 7626707 7626708 SSUBM407_1336 SSUBM407_1337     TRUE 0.989 -10.000 0.330 NA   NA
 7626708 7626709 SSUBM407_1337 SSUBM407_1338     TRUE 0.884 10.000 0.023 1.000 N NA
 7626709 7626710 SSUBM407_1338 SSUBM407_1339     TRUE 0.903 -13.000 0.015 1.000 N NA
 7626710 7626711 SSUBM407_1339 SSUBM407_1340   hemN FALSE 0.133 231.000 0.060 1.000 N NA
 7626713 7626714 SSUBM407_1342 SSUBM407_1343 glgP deoD FALSE 0.055 175.000 0.000 1.000 N NA
 7626714 7626715 SSUBM407_1343 SSUBM407_1344 deoD punA TRUE 0.954 33.000 0.040 0.001 Y NA
 7626715 7626716 SSUBM407_1344 SSUBM407_1345 punA   TRUE 0.717 12.000 0.000 1.000 N NA
 7626716 7626717 SSUBM407_1345 SSUBM407_1346   deoB TRUE 0.804 0.000 0.000 1.000 N NA
 7626717 7626718 SSUBM407_1346 SSUBM407_1347 deoB rpiA FALSE 0.216 329.000 0.018 1.000 Y NA
 7626720 7626721 SSUBM407_1349 SSUBM407_1350     TRUE 0.990 0.000 0.045 0.060 Y NA
 7626721 7626722 SSUBM407_1350 SSUBM407_1351     TRUE 0.996 13.000 0.564 0.060 Y NA
 7626723 7626724 SSUBM407_1352 SSUBM407_1353 trmE   FALSE 0.231 94.000 0.000 NA   NA
 7626725 7626726 SSUBM407_1354 SSUBM407_1355     FALSE 0.238 89.000 0.000 NA   NA
 7626726 7626727 SSUBM407_1355 SSUBM407_1356     TRUE 0.865 12.000 0.000 NA   NA
 7626727 7626728 SSUBM407_1356 SSUBM407_1357     FALSE 0.274 73.000 0.000 NA   NA
 7626728 7626729 SSUBM407_1357 SSUBM407_1358     FALSE 0.280 72.000 0.000 NA   NA
 7626729 7626730 SSUBM407_1358 SSUBM407_1359     TRUE 0.892 -13.000 0.000 NA   NA
 7626730 7626731 SSUBM407_1359 SSUBM407_1360   pepV TRUE 0.575 41.000 0.000 1.000   NA
 7626731 7626732 SSUBM407_1360 SSUBM407_1361 pepV   TRUE 0.487 101.000 0.000 1.000 Y NA
 7626732 7626733 SSUBM407_1361 SSUBM407_1362     FALSE 0.033 371.000 0.000 1.000   NA
 7626733 7626734 SSUBM407_1362 SSUBM407_1363     TRUE 0.589 40.000 0.000 NA   NA
 7626734 7626735 SSUBM407_1363 SSUBM407_1364     TRUE 0.630 36.000 0.000 NA   NA
 7626735 7626736 SSUBM407_1364 SSUBM407_1365     FALSE 0.151 151.000 0.000 NA   NA
 7626736 7626737 SSUBM407_1365 SSUBM407_1366     FALSE 0.171 131.000 0.000 1.000   NA
 7626737 7626738 SSUBM407_1366 SSUBM407_1367     FALSE 0.136 164.000 0.000 1.000   NA
 7626738 7626739 SSUBM407_1367 SSUBM407_1368     TRUE 0.968 13.000 0.150 NA   NA
 7626739 7626740 SSUBM407_1368 SSUBM407_1369     TRUE 0.993 -7.000 0.502 NA   NA
 7626741 7626742 SSUBM407_1370 SSUBM407_1371     TRUE 0.996 0.000 0.796 1.000   NA
 7626743 7626744 SSUBM407_1372 SSUBM407_1373     TRUE 0.896 2.000 0.000 1.000   NA
 7626744 7626745 SSUBM407_1373 SSUBM407_1374     FALSE 0.052 296.000 0.000 NA   NA
 7626745 7626746 SSUBM407_1374 SSUBM407_1375     TRUE 0.505 47.000 0.000 NA   NA
 7626746 7626747 SSUBM407_1375 SSUBM407_1376     TRUE 0.372 101.000 0.019 NA   NA
 7626747 7626748 SSUBM407_1376 SSUBM407_1377     TRUE 0.968 11.000 0.130 NA   NA
 7626748 7626749 SSUBM407_1377 SSUBM407_1378     FALSE 0.305 66.000 0.000 NA   NA
 7626749 7626750 SSUBM407_1378 SSUBM407_1379     FALSE 0.314 65.000 0.000 NA   NA
 7626750 7626751 SSUBM407_1379 SSUBM407_1380     FALSE 0.031 390.000 0.000 NA   NA
 7626751 7626752 SSUBM407_1380 SSUBM407_1381     TRUE 0.870 6.000 0.000 NA   NA
 7626752 7626753 SSUBM407_1381 SSUBM407_1382     FALSE 0.117 183.000 0.000 NA   NA
 7626753 7626754 SSUBM407_1382 SSUBM407_1383     TRUE 0.997 -3.000 0.895 1.000   NA
 7626754 7626755 SSUBM407_1383 SSUBM407_1384     TRUE 0.970 23.000 0.368 NA   NA
 7626755 7626756 SSUBM407_1384 SSUBM407_1385     FALSE 0.018 757.000 0.000 NA   NA
 7626756 7626757 SSUBM407_1385 SSUBM407_1386     TRUE 0.992 15.000 0.318 1.000 Y NA
 7626757 7626758 SSUBM407_1386 SSUBM407_1387     TRUE 0.981 11.000 0.259 1.000   NA
 7626760 7626761 SSUBM407_1389 SSUBM407_1390 aldB   TRUE 0.977 4.000 0.182 1.000   NA
 7626761 7626762 SSUBM407_1390 SSUBM407_1391     TRUE 0.989 -10.000 0.324 NA   NA
 7626763 7626764 SSUBM407_1392 SSUBM407_1393     TRUE 0.824 64.000 0.333 NA   NA
 7626765 7626766 SSUBM407_1394 SSUBM407_1395     FALSE 0.135 167.000 0.000 NA   NA
 7626766 7626767 SSUBM407_1395 SSUBM407_1396     TRUE 0.988 2.000 0.308 NA   NA
 7626767 7626768 SSUBM407_1396 SSUBM407_1397   eno FALSE 0.048 310.000 0.000 NA   NA
 7626772 7626773 SSUBM407_1401 SSUBM407_1402     FALSE 0.026 274.000 0.000 1.000 N NA
 7626773 7626774 SSUBM407_1402 SSUBM407_1403   ezrA TRUE 0.419 52.000 0.009 1.000 N NA
 7626774 7626775 SSUBM407_1403 SSUBM407_1404 ezrA gyrB FALSE 0.237 89.000 0.011 1.000 N NA
 7626775 7626776 SSUBM407_1404 SSUBM407_1405 gyrB   FALSE 0.118 182.000 0.000 NA   NA
 7626776 7626777 SSUBM407_1405 SSUBM407_1406     TRUE 0.850 14.000 0.000 NA   NA
 7626777 7626778 SSUBM407_1406 SSUBM407_1407     FALSE 0.016 1464.000 0.000 1.000   NA
 7626778 7626779 SSUBM407_1407 SSUBM407_1408     TRUE 0.892 -13.000 0.000 NA   NA
 7626779 7626780 SSUBM407_1408 SSUBM407_1409     FALSE 0.048 310.000 0.000 NA   NA
 7626780 7626781 SSUBM407_1409 SSUBM407_1410     TRUE 0.984 15.000 0.400 NA   NA
 7626781 7626782 SSUBM407_1410 SSUBM407_1411     TRUE 0.910 -7.000 0.000 NA   NA
 7626782 7626783 SSUBM407_1411 SSUBM407_1412     TRUE 0.865 12.000 0.000 NA   NA
 7626783 7626784 SSUBM407_1412 SSUBM407_1413     TRUE 0.779 21.000 0.000 NA   NA
 7626784 7626785 SSUBM407_1413 SSUBM407_1414     FALSE 0.038 354.000 0.000 NA   NA
 7626785 7626786 SSUBM407_1414 SSUBM407_1415     FALSE 0.173 131.000 0.000 NA   NA
 7626786 7626787 SSUBM407_1415 SSUBM407_1416     TRUE 0.865 12.000 0.000 NA   NA
 7626787 7626788 SSUBM407_1416 SSUBM407_1417     TRUE 0.892 -13.000 0.000 NA   NA
 7626788 7626789 SSUBM407_1417 SSUBM407_1418     TRUE 0.915 -3.000 0.000 NA   NA
 7626789 7626790 SSUBM407_1418 SSUBM407_1419     TRUE 0.915 -3.000 0.000 NA   NA
 7626790 7626791 SSUBM407_1419 SSUBM407_1420     TRUE 0.902 -10.000 0.000 NA   NA
 7626791 7626792 SSUBM407_1420 SSUBM407_1421     FALSE 0.051 297.000 0.000 NA   NA
 7626793 7626794 SSUBM407_1422 SSUBM407_1423     TRUE 0.392 56.000 0.000 NA   NA
 7626794 7626795 SSUBM407_1423 SSUBM407_1424     FALSE 0.018 687.000 0.000 NA   NA
 7626796 7626797 SSUBM407_1425 SSUBM407_1426 rpmE   FALSE 0.163 119.000 0.004 1.000 N NA
 7626797 7626798 SSUBM407_1426 SSUBM407_1427     TRUE 0.890 -13.000 0.000 1.000   NA
 7626799 7626800 SSUBM407_1428 SSUBM407_1429   rpsN FALSE 0.071 141.000 0.000 1.000 N NA
 7626800 7626801 SSUBM407_1429 SSUBM407_1430 rpsN   FALSE 0.114 82.000 0.000 1.000 N NA
 7626801 7626802 SSUBM407_1430 SSUBM407_1431     TRUE 0.953 -10.000 0.094 1.000 N NA
 7626803 7626804 SSUBM407_t0050 SSUBM407_1432     FALSE 0.100 196.000 0.000 NA   NA
 7626804 7626805 SSUBM407_1432 SSUBM407_1433   sodA FALSE 0.028 262.000 0.000 1.000 N NA
 7626805 7626806 SSUBM407_1433 SSUBM407_1434 sodA   FALSE 0.204 113.000 0.012 1.000 N NA
 7626806 7626807 SSUBM407_1434 SSUBM407_1435     FALSE 0.151 151.000 0.000 NA   NA
 7626807 7626808 SSUBM407_1435 SSUBM407_1436     FALSE 0.204 108.000 0.000 NA   NA
 7626808 7626809 SSUBM407_1436 SSUBM407_1437     FALSE 0.028 430.000 0.000 NA   NA
 7626809 7626810 SSUBM407_1437 SSUBM407_1438     TRUE 0.994 0.000 0.128 0.026 Y NA
 7626810 7626811 SSUBM407_1438 SSUBM407_1439     TRUE 0.996 0.000 0.349 1.000 Y NA
 7626811 7626812 SSUBM407_1439 SSUBM407_1440     TRUE 0.996 3.000 0.363 0.026 Y NA
 7626812 7626813 SSUBM407_1440 SSUBM407_1441     TRUE 0.552 216.000 0.150 1.000 Y NA
 7626813 7626814 SSUBM407_1441 SSUBM407_1442     TRUE 0.460 131.000 0.109 NA   NA
 7626814 7626815 SSUBM407_1442 SSUBM407_1443   clpP TRUE 0.402 127.000 0.065 NA   NA
 7626815 7626816 SSUBM407_1443 SSUBM407_1444 clpP upp FALSE 0.185 117.000 0.010 1.000 N NA
 7626816 7626817 SSUBM407_1444 SSUBM407_1445 upp dexB FALSE 0.116 80.000 0.000 1.000 N NA
 7626817 7626818 SSUBM407_1445 SSUBM407_1446 dexB gtfA TRUE 0.656 74.000 0.000 0.009 Y NA
 7626818 7626819 SSUBM407_1446 SSUBM407_1447 gtfA msmG TRUE 0.583 70.000 0.000 1.000 Y NA
 7626819 7626820 SSUBM407_1447 SSUBM407_1448 msmG msmF TRUE 0.999 11.000 0.925 0.026 Y NA
 7626820 7626821 SSUBM407_1448 SSUBM407_1449 msmF msmE TRUE 0.846 132.000 0.275 0.026 Y NA
 7626821 7626822 SSUBM407_1449 SSUBM407_1450 msmE aga TRUE 0.992 13.000 0.286 1.000 Y NA
 7626824 7626825 SSUBM407_1452 SSUBM407_1453     TRUE 0.989 4.000 0.082 0.010 Y NA
 7626826 7626827 SSUBM407_1454 SSUBM407_1455     TRUE 0.850 14.000 0.000 NA   NA
 7626827 7626828 SSUBM407_1455 SSUBM407_1456     TRUE 0.861 10.000 0.000 NA   NA
 7626828 7626829 SSUBM407_1456 SSUBM407_1457     FALSE 0.082 228.000 0.000 NA   NA
 7626829 7626830 SSUBM407_1457 SSUBM407_1458     TRUE 0.984 -10.000 0.209 1.000   NA
 7626830 7626831 SSUBM407_1458 SSUBM407_1459     TRUE 0.900 -10.000 0.000 1.000   NA
 7626832 7626833 SSUBM407_1460 SSUBM407_1461     FALSE 0.167 133.000 0.000 1.000   NA
 7626833 7626834 SSUBM407_1461 SSUBM407_1462     FALSE 0.198 112.000 0.000 NA   NA
 7626834 7626835 SSUBM407_1462 SSUBM407_1463     TRUE 0.892 -13.000 0.000 NA   NA
 7626835 7626836 SSUBM407_1463 SSUBM407_1464     TRUE 0.391 145.000 0.000 1.000 Y NA
 7626836 7626837 SSUBM407_1464 SSUBM407_1465     FALSE 0.027 433.000 0.000 NA   NA
 7626837 7626838 SSUBM407_1465 SSUBM407_1466     FALSE 0.253 78.000 0.000 NA   NA
 7626838 7626839 SSUBM407_1466 SSUBM407_1467     FALSE 0.235 91.000 0.000 NA   NA
 7626841 7626842 SSUBM407_1469 SSUBM407_1470     TRUE 0.981 -3.000 0.142 NA   NA
 7626842 7626843 SSUBM407_1470 SSUBM407_1471   mtnN FALSE 0.041 199.000 0.000 1.000 N NA
 7626843 7626844 SSUBM407_1471 SSUBM407_1472 mtnN   TRUE 0.942 9.000 0.041 NA   NA
 7626844 7626845 SSUBM407_1472 SSUBM407_1473     TRUE 0.937 11.000 0.025 NA   NA
 7626845 7626846 SSUBM407_1473 SSUBM407_1474   gcaD TRUE 0.874 9.000 0.015 1.000 N NA
 7626846 7626847 SSUBM407_1474 SSUBM407_1475 gcaD   FALSE 0.190 176.000 0.003 NA   NA
 7626847 7626848 SSUBM407_1475 SSUBM407_1476     TRUE 0.915 -3.000 0.000 NA   NA
 7626848 7626849 SSUBM407_1476 SSUBM407_1477     FALSE 0.193 116.000 0.000 NA   NA
 7626849 7626850 SSUBM407_1477 SSUBM407_1478     TRUE 0.995 -7.000 0.710 NA   NA
 7626850 7626851 SSUBM407_1478 SSUBM407_1479     TRUE 0.353 60.000 0.000 NA   NA
 7626851 7626852 SSUBM407_1479 SSUBM407_1480     TRUE 0.892 -13.000 0.000 NA   NA
 7626852 7626853 SSUBM407_1480 SSUBM407_1481     TRUE 0.915 -3.000 0.000 NA   NA
 7626853 7626854 SSUBM407_1481 SSUBM407_1482     FALSE 0.049 306.000 0.000 NA   NA
 7626854 7626855 SSUBM407_1482 SSUBM407_1483     FALSE 0.126 175.000 0.000 1.000   NA
 7626855 7626856 SSUBM407_1483 SSUBM407_1484     TRUE 0.996 2.000 0.855 1.000   NA
 7626856 7626857 SSUBM407_1484 SSUBM407_1485     TRUE 0.722 96.000 0.492 1.000 N NA
 7626857 7626858 SSUBM407_1485 SSUBM407_1486     TRUE 0.998 -7.000 0.812 1.000 Y NA
 7626860 7626861 SSUBM407_1488 SSUBM407_1489     FALSE 0.155 147.000 0.000 NA   NA
 7626861 7626862 SSUBM407_1489 SSUBM407_1490     TRUE 0.861 10.000 0.000 NA   NA
 7626862 7626863 SSUBM407_1490 SSUBM407_1491     TRUE 0.986 0.000 0.382 1.000 N NA
 7626863 7626864 SSUBM407_1491 SSUBM407_1492     TRUE 0.940 -7.000 0.046 1.000 N NA
 7626864 7626865 SSUBM407_1492 SSUBM407_1493     FALSE 0.047 311.000 0.000 NA   NA
 7626865 7626866 SSUBM407_1493 SSUBM407_1494     TRUE 0.979 -16.000 0.206 NA   NA
 7626866 7626867 SSUBM407_1494 SSUBM407_1495   lgt TRUE 0.956 11.000 0.079 NA   NA
 7626867 7626868 SSUBM407_1495 SSUBM407_1496 lgt ptsK TRUE 0.987 2.000 0.494 1.000 N NA
 7626869 7626870 SSUBM407_1497 SSUBM407_1498 pmi   FALSE 0.030 254.000 0.000 NA N NA
 7626870 7626871 SSUBM407_1498 SSUBM407_1499     TRUE 0.941 18.000 0.000 NA Y NA
 7626872 7626873 SSUBM407_1500 SSUBM407_1501     FALSE 0.289 70.000 0.000 NA   NA
 7626873 7626874 SSUBM407_1501 SSUBM407_1502     TRUE 0.892 -13.000 0.000 NA   NA
 7626874 7626875 SSUBM407_1502 SSUBM407_1503     FALSE 0.261 76.000 0.000 NA   NA
 7626875 7626876 SSUBM407_1503 SSUBM407_1504     FALSE 0.193 116.000 0.000 NA   NA
 7626878 7626879 SSUBM407_1506 SSUBM407_1507     TRUE 0.911 48.000 0.373 1.000   NA
 7626879 7626880 SSUBM407_1507 SSUBM407_1508     TRUE 0.974 -3.000 0.000 1.000 Y NA
 7626880 7626881 SSUBM407_1508 SSUBM407_1509   murZ FALSE 0.321 96.000 0.052 1.000 N NA
 7626881 7626882 SSUBM407_1509 SSUBM407_1510 murZ   FALSE 0.150 151.000 0.000 1.000   NA
 7626882 7626883 SSUBM407_1510 SSUBM407_1511   metK TRUE 0.541 44.000 0.000 1.000   NA
 7626883 7626884 SSUBM407_1511 SSUBM407_1512 metK   FALSE 0.012 399.000 0.000 1.000 N NA
 7626884 7626885 SSUBM407_1512 SSUBM407_1513     TRUE 0.805 19.000 0.000 NA   NA
 7626885 7626886 SSUBM407_1513 SSUBM407_1514     TRUE 0.366 59.000 0.000 NA   NA
 7626888 7626889 SSUBM407_1516 SSUBM407_1517   dnaH FALSE 0.261 195.000 0.067 NA   NA
 7626889 7626890 SSUBM407_1517 SSUBM407_1518 dnaH   TRUE 0.933 0.000 0.030 NA N NA
 7626890 7626891 SSUBM407_1518 SSUBM407_1519     TRUE 0.443 65.000 0.007 NA   NA
 7626891 7626892 SSUBM407_1519 SSUBM407_1520     FALSE 0.239 88.000 0.000 NA   NA
 7626892 7626893 SSUBM407_1520 SSUBM407_1521   udk TRUE 0.779 2.000 0.000 NA N NA
 7626894 7626895 SSUBM407_1522 SSUBM407_1523     TRUE 0.902 -10.000 0.000 NA   NA
 7626896 7626897 SSUBM407_1524 SSUBM407_1525 pgdA gloA FALSE 0.022 292.000 0.000 1.000 N NA
 7626897 7626898 SSUBM407_1525 SSUBM407_1526 gloA   FALSE 0.088 211.000 0.000 NA   NA
 7626898 7626899 SSUBM407_1526 SSUBM407_1527   gpmA FALSE 0.112 187.000 0.000 NA   NA
 7626900 7626901 SSUBM407_1528 SSUBM407_1529 atoB mvaS TRUE 0.883 29.000 0.000 1.000 Y NA
 7626901 7626902 SSUBM407_1529 SSUBM407_1530 mvaS mvaA TRUE 0.883 62.000 0.183 1.000 Y NA
 7626902 7626903 SSUBM407_1530 SSUBM407_1531 mvaA   FALSE 0.034 228.000 0.000 1.000 N NA
 7626906 7626907 SSUBM407_1534 SSUBM407_1535 hlpA   TRUE 0.627 90.000 0.156 NA   NA
 7626907 7626908 SSUBM407_1535 SSUBM407_1536     TRUE 0.994 -28.000 0.828 NA   NA
 7626908 7626909 SSUBM407_1536 SSUBM407_1537     TRUE 0.975 -31.000 0.203 NA   NA
 7626909 7626910 SSUBM407_1537 SSUBM407_1538   recN TRUE 0.341 94.000 0.006 NA   NA
 7626910 7626911 SSUBM407_1538 SSUBM407_1539 recN   TRUE 0.918 3.000 0.037 1.000 N NA
 7626911 7626912 SSUBM407_1539 SSUBM407_1540     TRUE 0.940 -7.000 0.048 1.000 N NA
 7626912 7626913 SSUBM407_1540 SSUBM407_1541   fps TRUE 0.945 -7.000 0.058 1.000 N NA
 7626913 7626914 SSUBM407_1541 SSUBM407_1542 fps xseB TRUE 0.960 0.000 0.100 1.000 N NA
 7626914 7626915 SSUBM407_1542 SSUBM407_1543 xseB xseA TRUE 0.996 -25.000 0.412 0.001 Y NA
 7626917 7626918 SSUBM407_1545 SSUBM407_1546     FALSE 0.031 388.000 0.000 1.000   NA
 7626918 7626919 SSUBM407_1546 SSUBM407_1547     TRUE 0.998 2.000 0.500 0.010 Y NA
 7626921 7626922 SSUBM407_1549 SSUBM407_1550     FALSE 0.021 569.000 0.000 NA   NA
 7626922 7626923 SSUBM407_1550 SSUBM407_1552   ppaC FALSE 0.021 561.000 0.000 1.000   NA
 7626925 7626926 SSUBM407_1554 SSUBM407_1555 pflC   TRUE 0.347 121.000 0.028 NA   NA
 7626929 7626930 SSUBM407_1558 SSUBM407_1559     FALSE 0.092 108.000 0.000 1.000 N NA
 7626930 7626931 SSUBM407_1559 SSUBM407_1560   nadE TRUE 0.993 13.000 0.194 0.003 Y NA
 7626932 7626933 SSUBM407_m0009 SSUBM407_1561     FALSE 0.018 660.000 0.000 NA   NA
 7626933 7626934 SSUBM407_1561 SSUBM407_1562     TRUE 0.955 -3.000 0.012 NA   NA
 7626934 7626935 SSUBM407_1562 SSUBM407_1563     TRUE 0.928 9.000 0.016 NA   NA
 7626935 7626936 SSUBM407_1563 SSUBM407_1564     FALSE 0.229 188.000 0.032 NA   NA
 7626936 7626937 SSUBM407_1564 SSUBM407_1565   coaD TRUE 0.872 -13.000 0.003 1.000 N NA
 7626937 7626938 SSUBM407_1565 SSUBM407_1566 coaD   TRUE 0.894 -10.000 0.008 1.000 N NA
 7626938 7626939 SSUBM407_1566 SSUBM407_1567     FALSE 0.048 308.000 0.000 NA   NA
 7626939 7626940 SSUBM407_1567 SSUBM407_1568     TRUE 0.381 57.000 0.000 NA   NA
 7626940 7626941 SSUBM407_1568 SSUBM407_1569     TRUE 0.963 0.000 0.035 NA   NA
 7626941 7626942 SSUBM407_1569 SSUBM407_1570     FALSE 0.048 308.000 0.000 NA   NA
 7626942 7626943 SSUBM407_1570 SSUBM407_1571     TRUE 0.999 -3.000 0.857 0.010 Y NA
 7626943 7626944 SSUBM407_1571 SSUBM407_1572     TRUE 0.956 39.000 0.500 NA   NA
 7626944 7626945 SSUBM407_1572 SSUBM407_1573     TRUE 0.981 -3.000 0.136 NA   NA
 7626945 7626946 SSUBM407_1573 SSUBM407_1574   dpr FALSE 0.015 361.000 0.000 1.000 N NA
 7626947 7626948 SSUBM407_1575 SSUBM407_1576     FALSE 0.131 170.000 0.000 NA   NA
 7626948 7626949 SSUBM407_1576 SSUBM407_1577     FALSE 0.309 132.000 0.019 NA   NA
 7626949 7626950 SSUBM407_1577 SSUBM407_1578     TRUE 0.989 -10.000 0.351 NA   NA
 7626951 7626952 SSUBM407_1579 SSUBM407_1580     TRUE 0.978 25.000 0.600 NA   NA
 7626952 7626953 SSUBM407_1580 SSUBM407_m0010     TRUE 0.366 59.000 0.000 NA   NA
 7626953 7626954 SSUBM407_m0010 SSUBM407_1581     TRUE 0.467 50.000 0.000 NA   NA
 7626954 7626955 SSUBM407_1581 SSUBM407_1582     TRUE 0.480 49.000 0.000 NA   NA
 7626955 7626956 SSUBM407_1582 SSUBM407_1583     FALSE 0.039 350.000 0.000 NA   NA
 7626956 7626957 SSUBM407_1583 SSUBM407_1584   rluB TRUE 0.955 0.000 0.014 NA   NA
 7626957 7626958 SSUBM407_1584 SSUBM407_1585 rluB scpB TRUE 0.976 -10.000 0.224 NA N NA
 7626958 7626959 SSUBM407_1585 SSUBM407_1586 scpB scpA TRUE 0.992 -16.000 0.570 NA   NA
 7626959 7626960 SSUBM407_1586 SSUBM407_1587 scpA xerD TRUE 0.956 0.000 0.017 NA   NA
 7626960 7626961 SSUBM407_1587 SSUBM407_1588 xerD   TRUE 0.978 -3.000 0.111 NA   NA
 7626961 7626962 SSUBM407_1588 SSUBM407_1589     TRUE 0.964 -3.000 0.034 NA   NA
 7626962 7626963 SSUBM407_1589 SSUBM407_1590     TRUE 0.913 -27.000 0.004 NA   NA
 7626963 7626964 SSUBM407_1590 SSUBM407_1591   glr TRUE 0.938 -3.000 0.034 1.000 N NA
 7626964 7626965 SSUBM407_1591 SSUBM407_1592 glr   TRUE 0.385 90.000 0.014 1.000   NA
 7626965 7626966 SSUBM407_1592 SSUBM407_1593     TRUE 0.433 100.000 0.051 1.000   NA
 7626968 7626969 SSUBM407_1595 SSUBM407_1596     TRUE 0.935 22.000 0.123 NA   NA
 7626969 7626970 SSUBM407_1596 SSUBM407_1597     TRUE 0.726 47.000 0.043 1.000   NA
 7626971 7626972 SSUBM407_1598 SSUBM407_1599     TRUE 0.572 70.000 0.154 1.000 N NA
 7626973 7626974 SSUBM407_1600 SSUBM407_1601 greA   TRUE 0.554 74.000 0.079 NA   NA
 7626974 7626975 SSUBM407_1601 SSUBM407_1602     TRUE 0.627 72.000 0.120 NA   NA
 7626975 7626976 SSUBM407_1602 SSUBM407_1603   murC TRUE 0.563 56.000 0.014 1.000   NA
 7626976 7626977 SSUBM407_1603 SSUBM407_1604 murC   TRUE 0.945 2.000 0.013 NA   NA
 7626977 7626978 SSUBM407_1604 SSUBM407_1605     TRUE 0.634 79.000 0.151 NA   NA
 7626978 7626979 SSUBM407_1605 SSUBM407_1606     FALSE 0.162 139.000 0.000 NA   NA
 7626979 7626980 SSUBM407_1606 SSUBM407_1607     TRUE 0.897 2.000 0.000 NA   NA
 7626980 7626981 SSUBM407_1607 SSUBM407_1608   engA FALSE 0.297 68.000 0.000 NA   NA
 7626981 7626982 SSUBM407_1608 SSUBM407_1609 engA   TRUE 0.805 19.000 0.000 NA   NA
 7626982 7626983 SSUBM407_1609 SSUBM407_1610   dnaI TRUE 0.820 18.000 0.000 NA   NA
 7626983 7626984 SSUBM407_1610 SSUBM407_1611 dnaI   TRUE 0.998 0.000 0.817 NA Y NA
 7626984 7626985 SSUBM407_1611 SSUBM407_1612     TRUE 0.954 -13.000 0.109 NA N NA
 7626985 7626986 SSUBM407_1612 SSUBM407_1613     FALSE 0.280 72.000 0.000 NA   NA
 7626986 7626987 SSUBM407_1613 SSUBM407_1614   csrR FALSE 0.237 90.000 0.000 NA   NA
 7626987 7626988 SSUBM407_1614 SSUBM407_1615 csrR gnd FALSE 0.246 82.000 0.012 1.000 N NA
 7626988 7626989 SSUBM407_1615 SSUBM407_1616 gnd   FALSE 0.317 97.000 0.002 NA   NA
 7626989 7626990 SSUBM407_1616 SSUBM407_1617     TRUE 0.850 14.000 0.000 NA   NA
 7626990 7626991 SSUBM407_1617 SSUBM407_1618     TRUE 0.960 14.000 0.117 NA   NA
 7626991 7626992 SSUBM407_1618 SSUBM407_1619     TRUE 0.820 18.000 0.000 NA   NA
 7626992 7626993 SSUBM407_1619 SSUBM407_1620     FALSE 0.250 79.000 0.000 NA   NA
 7626993 7626994 SSUBM407_1620 SSUBM407_1621   mraY FALSE 0.229 95.000 0.000 NA   NA
 7626994 7626995 SSUBM407_1621 SSUBM407_1622 mraY pbpX TRUE 0.984 2.000 0.038 1.000 Y NA
 7626995 7626996 SSUBM407_1622 SSUBM407_1623 pbpX ftsL TRUE 0.988 0.000 0.456 1.000 N NA
 7626996 7626997 SSUBM407_1623 SSUBM407_1624 ftsL mraW TRUE 0.928 11.000 0.077 1.000 N NA
 7626998 7626999 SSUBM407_1625 SSUBM407_1626     TRUE 0.867 11.000 0.000 NA   NA
 7626999 7627000 SSUBM407_1626 SSUBM407_1627     TRUE 0.844 15.000 0.000 NA   NA
 7627000 7627001 SSUBM407_1627 SSUBM407_1628     TRUE 0.867 11.000 0.000 NA   NA
 7627001 7627002 SSUBM407_1628 SSUBM407_1629     TRUE 0.857 13.000 0.000 NA   NA
 7627002 7627003 SSUBM407_1629 SSUBM407_1630     TRUE 0.902 -10.000 0.000 NA   NA
 7627003 7627004 SSUBM407_1630 SSUBM407_1631     TRUE 0.424 53.000 0.000 NA   NA
 7627005 7627006 SSUBM407_1632 SSUBM407_1633     TRUE 0.997 20.000 1.000 1.000 Y NA
 7627006 7627007 SSUBM407_1633 SSUBM407_1634     FALSE 0.251 78.000 0.000 1.000   NA
 7627007 7627008 SSUBM407_1634 SSUBM407_1635     FALSE 0.247 79.000 0.000 1.000   NA
 7627008 7627009 SSUBM407_1635 SSUBM407_1636     TRUE 0.621 19.000 0.000 1.000 N NA
 7627010 7627011 SSUBM407_1637 SSUBM407_1638     FALSE 0.168 133.000 0.000 NA   NA
 7627011 7627012 SSUBM407_1638 SSUBM407_1639     TRUE 0.844 15.000 0.000 NA   NA
 7627012 7627013 SSUBM407_1639 SSUBM407_1640     TRUE 0.997 12.000 0.490 0.002 Y NA
 7627013 7627014 SSUBM407_1640 SSUBM407_1641     FALSE 0.018 321.000 0.000 1.000 N NA
 7627015 7627016 SSUBM407_1642 SSUBM407_1643     FALSE 0.026 455.000 0.000 NA   NA
 7627016 7627017 SSUBM407_1643 SSUBM407_1644   glyS TRUE 0.931 10.000 0.020 NA   NA
 7627017 7627018 SSUBM407_1644 SSUBM407_1645 glyS glyQ TRUE 0.999 0.000 0.651 0.001 Y NA
 7627018 7627019 SSUBM407_1645 SSUBM407_1646 glyQ   FALSE 0.047 311.000 0.000 NA   NA
 7627019 7627020 SSUBM407_1646 SSUBM407_1647     FALSE 0.066 267.000 0.000 NA   NA
 7627020 7627021 SSUBM407_1647 SSUBM407_1648     FALSE 0.118 182.000 0.000 NA   NA
 7627021 7627022 SSUBM407_1648 SSUBM407_1649     TRUE 0.999 1.000 0.938 1.000 Y NA
 7627022 7627023 SSUBM407_1649 SSUBM407_1650     TRUE 0.961 -7.000 0.104 1.000 N NA
 7627023 7627024 SSUBM407_1650 SSUBM407_1651     FALSE 0.064 157.000 0.000 NA N NA
 7627024 7627025 SSUBM407_1651 SSUBM407_1652     FALSE 0.153 150.000 0.000 NA   NA
 7627026 7627027 SSUBM407_1653 SSUBM407_1654 metE metF TRUE 0.988 4.000 0.050 0.002 Y NA
 7627029 7627030 SSUBM407_1656 SSUBM407_1657   manL FALSE 0.083 222.000 0.000 1.000   NA
 7627030 7627031 SSUBM407_1657 SSUBM407_1658 manL manM TRUE 0.995 32.000 0.943 0.016 Y NA
 7627031 7627032 SSUBM407_1658 SSUBM407_1659 manM manN TRUE 0.997 18.000 0.812 0.016 Y NA
 7627032 7627033 SSUBM407_1659 SSUBM407_1660 manN   TRUE 0.902 60.000 0.583 NA   NA
 7627033 7627034 SSUBM407_1660 SSUBM407_m0011     TRUE 0.767 22.000 0.000 NA   NA
 7627034 7627035 SSUBM407_m0011 SSUBM407_1661   serS TRUE 0.867 11.000 0.000 NA   NA
 7627036 7627037 SSUBM407_1662 SSUBM407_1663     TRUE 0.890 45.000 0.011 0.056 Y NA
 7627037 7627038 SSUBM407_1663 SSUBM407_1664     TRUE 0.584 108.000 0.000 0.002 Y NA
 7627038 7627039 SSUBM407_1664 SSUBM407_1665     TRUE 0.976 -7.000 0.104 NA   NA
 7627041 7627042 SSUBM407_1667 SSUBM407_1668     FALSE 0.124 178.000 0.000 NA   NA
 7627042 7627043 SSUBM407_1668 SSUBM407_1669     TRUE 0.910 -7.000 0.000 NA   NA
 7627043 7627044 SSUBM407_1669 SSUBM407_1670   accA FALSE 0.321 64.000 0.000 1.000   NA
 7627044 7627045 SSUBM407_1670 SSUBM407_1671 accA accD TRUE 0.997 -3.000 0.234 0.001 Y NA
 7627045 7627046 SSUBM407_1671 SSUBM407_1672 accD accC TRUE 0.981 15.000 0.090 1.000 Y NA
 7627046 7627047 SSUBM407_1672 SSUBM407_1673 accC fabZ FALSE 0.288 294.000 0.045 1.000 Y NA
 7627047 7627048 SSUBM407_1673 SSUBM407_1674 fabZ fabE TRUE 0.991 -3.000 0.047 0.006 Y NA
 7627048 7627049 SSUBM407_1674 SSUBM407_1675 fabE fabF TRUE 0.988 1.000 0.074 1.000 Y NA
 7627049 7627050 SSUBM407_1675 SSUBM407_1676 fabF fabG TRUE 0.950 26.000 0.056 1.000 Y NA
 7627050 7627051 SSUBM407_1676 SSUBM407_1677 fabG fabD TRUE 0.996 10.000 0.432 0.006 Y NA
 7627051 7627052 SSUBM407_1677 SSUBM407_1678 fabD fabK TRUE 0.971 2.000 0.099 1.000   NA
 7627052 7627053 SSUBM407_1678 SSUBM407_1679 fabK acpP TRUE 0.500 173.000 0.216 1.000   NA
 7627053 7627054 SSUBM407_1679 SSUBM407_1680 acpP fabH TRUE 0.718 60.000 0.065 0.006   NA
 7627054 7627055 SSUBM407_1680 SSUBM407_1681 fabH   TRUE 0.953 -3.000 0.070 1.000 N NA
 7627055 7627056 SSUBM407_1681 SSUBM407_1682     TRUE 0.430 80.000 0.098 1.000 N NA
 7627056 7627057 SSUBM407_1682 SSUBM407_1683     FALSE 0.039 436.000 0.000 0.042   NA
 7627059 7627060 SSUBM407_1685 SSUBM407_1686   alr FALSE 0.095 201.000 0.000 NA   NA
 7627060 7627061 SSUBM407_1686 SSUBM407_1687 alr acpS TRUE 0.956 -7.000 0.093 1.000 N NA
 7627061 7627062 SSUBM407_1687 SSUBM407_1688 acpS secA FALSE 0.183 115.000 0.008 1.000 N NA
 7627062 7627063 SSUBM407_1688 SSUBM407_1689 secA   FALSE 0.045 320.000 0.000 NA   NA
 7627063 7627064 SSUBM407_1689 SSUBM407_1690   scrK FALSE 0.020 609.000 0.000 NA   NA
 7627064 7627065 SSUBM407_1690 SSUBM407_1691 scrK scrA TRUE 0.793 128.000 0.235 1.000 Y NA
 7627066 7627067 SSUBM407_1692 SSUBM407_1693 scrB scrR TRUE 0.987 -19.000 0.571 1.000 N NA
 7627068 7627069 SSUBM407_1694 SSUBM407_1695 nusB   TRUE 0.986 -10.000 0.265 NA   NA
 7627069 7627070 SSUBM407_1695 SSUBM407_1696   efp TRUE 0.844 28.000 0.031 NA   NA
 7627070 7627071 SSUBM407_1696 SSUBM407_1697 efp   TRUE 0.621 64.000 0.160 1.000 N NA
 7627071 7627072 SSUBM407_1697 SSUBM407_1698   uvrA FALSE 0.206 99.000 0.008 1.000 N NA
 7627073 7627074 SSUBM407_1699 SSUBM407_1700     TRUE 0.943 16.000 0.072 NA   NA
 7627075 7627076 SSUBM407_1701 SSUBM407_1702 rpsR ssb TRUE 0.660 33.000 0.012 1.000 N NA
 7627076 7627077 SSUBM407_1702 SSUBM407_1703 ssb rpsF TRUE 0.866 12.000 0.012 1.000 N NA
 7627081 7627082 SSUBM407_1707 SSUBM407_1708 acoL pdhC FALSE 0.187 274.000 0.000 1.000 Y NA
 7627082 7627083 SSUBM407_1708 SSUBM407_1709 pdhC pdhB FALSE 0.161 341.000 0.000 0.042 Y NA
 7627083 7627084 SSUBM407_1709 SSUBM407_1710 pdhB pdhA TRUE 0.827 287.000 0.769 0.001 Y NA
 7627086 7627087 SSUBM407_1712 SSUBM407_1713     FALSE 0.136 165.000 0.000 NA   NA
 7627087 7627088 SSUBM407_1713 SSUBM407_1714   rbfA FALSE 0.056 282.000 0.000 NA   NA
 7627088 7627089 SSUBM407_1714 SSUBM407_1715 rbfA infB TRUE 0.856 156.000 0.530 1.000 Y NA
 7627089 7627090 SSUBM407_1715 SSUBM407_1716 infB   TRUE 0.987 18.000 0.223 NA Y NA
 7627090 7627091 SSUBM407_1716 SSUBM407_1717     TRUE 0.984 -13.000 0.408 NA N NA
 7627091 7627092 SSUBM407_1717 SSUBM407_1718   nusA TRUE 0.991 17.000 0.323 NA Y NA
 7627092 7627093 SSUBM407_1718 SSUBM407_1719 nusA   TRUE 0.896 74.000 0.759 NA   NA
 7627093 7627094 SSUBM407_1719 SSUBM407_1720     FALSE 0.034 571.000 0.004 NA   NA
 7627094 7627095 SSUBM407_1720 SSUBM407_1721     TRUE 0.983 -3.000 0.154 NA   NA
 7627095 7627096 SSUBM407_1721 SSUBM407_1722     TRUE 0.684 50.000 0.107 NA N NA
 7627096 7627097 SSUBM407_1722 SSUBM407_1723     TRUE 0.975 -3.000 0.167 NA N NA
 7627098 7627099 SSUBM407_1724 SSUBM407_1725     TRUE 0.897 2.000 0.000 NA   NA
 7627100 7627101 SSUBM407_1726 SSUBM407_1727     TRUE 0.983 -3.000 0.283 NA N NA
 7627101 7627102 SSUBM407_1727 SSUBM407_1728     TRUE 0.961 -7.000 0.033 1.000   NA
 7627102 7627103 SSUBM407_1728 SSUBM407_1729     FALSE 0.214 101.000 0.000 1.000   NA
 7627103 7627104 SSUBM407_1729 SSUBM407_1730     TRUE 0.992 3.000 0.567 NA   NA
 7627106 7627107 SSUBM407_1732 SSUBM407_1733 oppC oppB TRUE 0.997 14.000 0.727 0.025 Y NA
 7627107 7627108 SSUBM407_1733 SSUBM407_1734 oppB oppF TRUE 0.995 2.000 0.727 1.000   NA
 7627108 7627109 SSUBM407_1734 SSUBM407_1735 oppF oppD TRUE 0.994 3.000 0.477 0.001   NA
 7627109 7627110 SSUBM407_1735 SSUBM407_1736 oppD oppA FALSE 0.101 386.000 0.000 1.000 Y NA
 7627112 7627113 SSUBM407_1738 SSUBM407_1739 sufB   FALSE 0.253 78.000 0.000 NA   NA
 7627113 7627114 SSUBM407_1739 SSUBM407_1740   iscU FALSE 0.158 144.000 0.000 NA   NA
 7627114 7627115 SSUBM407_1740 SSUBM407_1741 iscU csdB TRUE 0.979 -13.000 0.292 1.000 N NA
 7627115 7627116 SSUBM407_1741 SSUBM407_1742 csdB sufD TRUE 0.988 4.000 0.606 1.000 N NA
 7627116 7627117 SSUBM407_1742 SSUBM407_1743 sufD sufC TRUE 0.983 17.000 0.139 1.000 Y NA
 7627117 7627118 SSUBM407_1743 SSUBM407_1744 sufC rgpG FALSE 0.024 553.000 0.013 1.000 N NA
 7627118 7627119 SSUBM407_1744 SSUBM407_1745 rgpG mecA TRUE 0.982 -3.000 0.267 NA N NA
 7627119 7627120 SSUBM407_1745 SSUBM407_1746 mecA bacA TRUE 0.383 128.000 0.132 NA N NA
 7627121 7627122 SSUBM407_1747 SSUBM407_1748   glnQ2 TRUE 0.998 -7.000 0.758 1.000 Y NA
 7627123 7627124 SSUBM407_1749 SSUBM407_1750     TRUE 0.443 86.000 0.036 NA   NA
 7627124 7627125 SSUBM407_1750 SSUBM407_1751   ilvA TRUE 0.877 10.000 0.017 1.000 N NA
 7627125 7627126 SSUBM407_1751 SSUBM407_1752 ilvA ilvC FALSE 0.286 283.000 0.033 1.000 Y NA
 7627126 7627127 SSUBM407_1752 SSUBM407_1753 ilvC ilvH TRUE 0.768 141.000 0.130 0.002 Y NA
 7627127 7627128 SSUBM407_1753 SSUBM407_1754 ilvH alsS TRUE 0.996 -7.000 0.249 0.001 Y NA
 7627129 7627130 SSUBM407_1755 SSUBM407_1756     TRUE 0.970 -13.000 0.100 NA   NA
 7627130 7627131 SSUBM407_1756 SSUBM407_1757     TRUE 0.983 -25.000 0.300 NA   NA
 7627131 7627132 SSUBM407_1757 SSUBM407_1758   ilvD FALSE 0.140 161.000 0.000 NA   NA
 7627132 7627133 SSUBM407_1758 SSUBM407_1759 ilvD   TRUE 0.450 51.000 0.000 NA   NA
 7627134 7627135 SSUBM407_1760 SSUBM407_1761     FALSE 0.235 91.000 0.000 NA   NA
 7627135 7627136 SSUBM407_1761 SSUBM407_1762   rpsI FALSE 0.046 313.000 0.000 NA   NA
 7627136 7627137 SSUBM407_1762 SSUBM407_1763 rpsI rplM TRUE 0.995 20.000 0.601 0.020 Y NA
 7627137 7627138 SSUBM407_1763 SSUBM407_1764 rplM   TRUE 0.861 9.000 0.000 NA   NA
 7627138 7627139 SSUBM407_1764 SSUBM407_1765     FALSE 0.035 364.000 0.000 NA   NA
 7627139 7627140 SSUBM407_1765 SSUBM407_1766     TRUE 0.964 -3.000 0.036 NA   NA
 7627140 7627141 SSUBM407_1766 SSUBM407_1767     TRUE 0.975 1.000 0.109 NA   NA
 7627141 7627142 SSUBM407_1767 SSUBM407_1768     TRUE 0.389 56.000 0.000 1.000   NA
 7627143 7627144 SSUBM407_1769 SSUBM407_1770     FALSE 0.266 75.000 0.000 NA   NA
 7627145 7627146 SSUBM407_1771 SSUBM407_1772   msmK FALSE 0.076 240.000 0.000 NA   NA
 7627146 7627147 SSUBM407_1772 SSUBM407_1773 msmK lrp FALSE 0.078 236.000 0.000 NA   NA
 7627147 7627148 SSUBM407_1773 SSUBM407_1774 lrp   TRUE 0.857 13.000 0.000 NA   NA
 7627148 7627149 SSUBM407_1774 SSUBM407_1775     TRUE 0.996 -7.000 0.227 0.009 Y NA
 7627149 7627150 SSUBM407_1775 SSUBM407_1776     TRUE 0.995 -3.000 0.667 NA   NA
 7627150 7627151 SSUBM407_1776 SSUBM407_1777     FALSE 0.083 224.000 0.000 NA   NA
 7627151 7627152 SSUBM407_1777 SSUBM407_1778     FALSE 0.008 590.000 0.000 1.000 N NA
 7627152 7627153 SSUBM407_1778 SSUBM407_1779     TRUE 0.911 70.000 0.250 0.025 Y NA
 7627153 7627154 SSUBM407_1779 SSUBM407_1780     TRUE 0.998 10.000 0.917 0.025 Y NA
 7627154 7627155 SSUBM407_1780 SSUBM407_1781   gcnA TRUE 0.375 202.000 0.182 1.000   NA
 7627155 7627156 SSUBM407_1781 SSUBM407_1782 gcnA   TRUE 0.989 10.000 0.500 NA   NA
 7627156 7627157 SSUBM407_1782 SSUBM407_1783     TRUE 0.960 -19.000 0.000 NA Y NA
 7627157 7627158 SSUBM407_1783 SSUBM407_1784     TRUE 0.896 2.000 0.000 1.000   NA
 7627160 7627161 SSUBM407_1786 SSUBM407_1787     FALSE 0.072 246.000 0.000 1.000   NA
 7627161 7627162 SSUBM407_1787 SSUBM407_1788   cysS TRUE 0.978 -7.000 0.129 1.000   NA
 7627162 7627163 SSUBM407_1788 SSUBM407_1789 cysS   TRUE 0.867 11.000 0.000 NA   NA
 7627163 7627164 SSUBM407_1789 SSUBM407_1790     TRUE 0.913 -6.000 0.000 NA   NA
 7627164 7627165 SSUBM407_1790 SSUBM407_1791   cysE TRUE 0.682 15.000 0.000 1.000 N NA
 7627165 7627166 SSUBM407_1791 SSUBM407_1792 cysE pnpA TRUE 0.361 56.000 0.006 1.000 N NA
 7627168 7627169 SSUBM407_1794 SSUBM407_1795     TRUE 0.902 -10.000 0.000 NA   NA
 7627169 7627170 SSUBM407_1795 SSUBM407_1796   murQ TRUE 0.896 2.000 0.000 1.000   NA
 7627172 7627173 SSUBM407_1798 SSUBM407_1799 rpsO pyrP FALSE 0.039 204.000 0.000 1.000 N NA
 7627173 7627174 SSUBM407_1799 SSUBM407_1800 pyrP   FALSE 0.195 115.000 0.000 NA   NA
 7627174 7627175 SSUBM407_1800 SSUBM407_1801     FALSE 0.147 154.000 0.000 NA   NA
 7627175 7627176 SSUBM407_1801 SSUBM407_1802     FALSE 0.030 402.000 0.000 NA   NA
 7627176 7627177 SSUBM407_1802 SSUBM407_1803     TRUE 0.904 -9.000 0.000 1.000   NA
 7627177 7627178 SSUBM407_1803 SSUBM407_1804     TRUE 0.878 4.000 0.000 NA   NA
 7627178 7627179 SSUBM407_1804 SSUBM407_1805     FALSE 0.051 297.000 0.000 NA   NA
 7627181 7627182 SSUBM407_1807 SSUBM407_1808   leuD TRUE 0.380 60.000 0.015 NA N NA
 7627182 7627183 SSUBM407_1808 SSUBM407_1809 leuD leuC TRUE 0.912 0.000 0.000 NA   NA
 7627183 7627184 SSUBM407_1809 SSUBM407_1810 leuC leuB TRUE 0.887 3.000 0.000 NA   NA
 7627184 7627185 SSUBM407_1810 SSUBM407_1811 leuB leuA TRUE 0.972 9.000 0.000 0.001 Y NA
 7627185 7627186 SSUBM407_1811 SSUBM407_1812 leuA   FALSE 0.031 380.000 0.000 1.000   NA
 7627186 7627187 SSUBM407_1812 SSUBM407_1813   pepS TRUE 0.778 59.000 0.190 1.000   NA
 7627187 7627188 SSUBM407_1813 SSUBM407_1814 pepS   FALSE 0.063 273.000 0.000 1.000   NA
 7627188 7627189 SSUBM407_1814 SSUBM407_1815     FALSE 0.078 236.000 0.000 NA   NA
 7627189 7627190 SSUBM407_1815 SSUBM407_1816   polC FALSE 0.240 87.000 0.000 NA   NA
 7627190 7627191 SSUBM407_1816 SSUBM407_1817 polC   FALSE 0.081 125.000 0.000 1.000 N NA
 7627191 7627192 SSUBM407_1817 SSUBM407_1818     TRUE 0.991 11.000 0.625 1.000   NA
 7627193 7627194 SSUBM407_1819 SSUBM407_1820     TRUE 0.995 11.000 0.316 0.002 Y NA
 7627194 7627195 SSUBM407_1820 SSUBM407_1821     TRUE 0.976 -3.000 0.099 1.000   NA
 7627195 7627196 SSUBM407_1821 SSUBM407_1822   glpF2 TRUE 0.996 10.000 0.857 0.044   NA
 7627197 7627198 SSUBM407_1823 SSUBM407_1824 proS eep FALSE 0.024 281.000 0.000 1.000 N NA
 7627198 7627199 SSUBM407_1824 SSUBM407_1825 eep   TRUE 0.888 10.000 0.027 1.000 N NA
 7627199 7627200 SSUBM407_1825 SSUBM407_1826   uppS TRUE 0.985 10.000 0.113 1.000 Y NA
 7627200 7627201 SSUBM407_1826 SSUBM407_1827 uppS   FALSE 0.184 114.000 0.007 NA N NA
 7627201 7627202 SSUBM407_1827 SSUBM407_1828   purA FALSE 0.092 110.000 0.000 NA N NA
 7627203 7627204 SSUBM407_1829 SSUBM407_1830 gshA ssnA FALSE 0.017 886.000 0.000 NA   NA
 7627204 7627205 SSUBM407_1830 SSUBM407_1831 ssnA   FALSE 0.248 80.000 0.000 NA   NA
 7627205 7627206 SSUBM407_1831 SSUBM407_1832     TRUE 0.934 -7.000 0.034 1.000 N NA
 7627207 7627208 SSUBM407_1833 SSUBM407_1834     TRUE 0.801 -7.000 0.000 1.000 N NA
 7627208 7627209 SSUBM407_1834 SSUBM407_1835     TRUE 0.955 10.000 0.000 1.000 Y NA
 7627209 7627210 SSUBM407_1835 SSUBM407_1836   clpC FALSE 0.230 114.000 0.022 1.000 N NA
 7627210 7627211 SSUBM407_1836 SSUBM407_1837 clpC ctsR TRUE 0.963 6.000 0.188 NA N NA
 7627212 7627213 SSUBM407_1838 SSUBM407_1839     TRUE 0.912 0.000 0.000 NA   NA
 7627214 7627215 SSUBM407_1840 SSUBM407_1841 tsf rpsB TRUE 0.901 156.000 0.748 1.000 Y NA
 7627215 7627216 SSUBM407_1841 SSUBM407_1842 rpsB   FALSE 0.038 347.000 0.000 1.000   NA
 7627218 7627219 SSUBM407_1843 SSUBM407_1844   nusG FALSE 0.156 144.000 0.000 1.000   NA
 7627219 7627220 SSUBM407_1844 SSUBM407_1845 nusG   TRUE 0.822 110.000 0.843 1.000 N NA
 7627220 7627221 SSUBM407_1845 SSUBM407_1846     TRUE 0.927 10.000 0.080 1.000 N NA
 7627221 7627222 SSUBM407_1846 SSUBM407_1847   pbp2A TRUE 0.893 22.000 0.111 1.000 N NA
 7627223 7627224 SSUBM407_1848 SSUBM407_1849     TRUE 0.776 2.000 0.000 1.000 N NA
 7627225 7627226 SSUBM407_1850 SSUBM407_1851 purR   FALSE 0.214 102.000 0.000 NA   NA
 7627226 7627227 SSUBM407_1851 SSUBM407_1852     TRUE 0.912 0.000 0.000 NA   NA
 7627227 7627228 SSUBM407_1852 SSUBM407_1853     TRUE 0.956 -10.000 0.030 NA   NA
 7627228 7627229 SSUBM407_1853 SSUBM407_1854   thiN TRUE 0.958 1.000 0.030 NA   NA
 7627229 7627230 SSUBM407_1854 SSUBM407_1855 thiN rpe TRUE 0.973 -7.000 0.166 1.000 N NA
 7627230 7627231 SSUBM407_1855 SSUBM407_1856 rpe engC TRUE 0.973 15.000 0.213 1.000   NA
 7627233 7627234 SSUBM407_1857 SSUBM407_1858     TRUE 0.914 -3.000 0.000 1.000   NA
 7627234 7627235 SSUBM407_1858 SSUBM407_1859     FALSE 0.035 363.000 0.000 1.000   NA
 7627235 7627236 SSUBM407_1859 SSUBM407_1860     FALSE 0.189 119.000 0.000 NA   NA
 7627236 7627237 SSUBM407_1860 SSUBM407_1861     FALSE 0.120 180.000 0.000 NA   NA
 7627237 7627238 SSUBM407_1861 SSUBM407_1862     TRUE 0.857 13.000 0.000 NA   NA
 7627238 7627239 SSUBM407_1862 SSUBM407_1863   ksgA FALSE 0.035 365.000 0.000 NA   NA
 7627239 7627240 SSUBM407_1863 SSUBM407_1864 ksgA   TRUE 0.857 20.000 0.002 NA   NA
 7627240 7627241 SSUBM407_1864 SSUBM407_1865     TRUE 0.850 14.000 0.000 NA   NA
 7627241 7627242 SSUBM407_1865 SSUBM407_1866     TRUE 0.994 2.000 0.615 NA   NA
 7627242 7627243 SSUBM407_1866 SSUBM407_1867   mutX FALSE 0.125 76.000 0.000 NA N NA
 7627243 7627244 SSUBM407_1867 SSUBM407_1868 mutX   TRUE 0.867 7.000 0.000 NA   NA
 7627244 7627245 SSUBM407_1868 SSUBM407_1869     TRUE 0.902 -10.000 0.000 NA   NA
 7627245 7627246 SSUBM407_1869 SSUBM407_1870     FALSE 0.222 98.000 0.000 NA   NA
 7627246 7627247 SSUBM407_1870 SSUBM407_1871     TRUE 0.910 -7.000 0.000 NA   NA
 7627247 7627248 SSUBM407_1871 SSUBM407_1872     TRUE 0.983 -16.000 0.058 NA Y NA
 7627248 7627249 SSUBM407_1872 SSUBM407_1873   rpmH FALSE 0.294 107.000 0.002 NA   NA
 7627249 7627250 SSUBM407_1873 SSUBM407_1874 rpmH   FALSE 0.197 168.000 0.002 1.000   NA
 7627250 7627251 SSUBM407_1874 SSUBM407_1875     TRUE 0.937 20.000 0.106 1.000   NA
 7627251 7627252 SSUBM407_1875 SSUBM407_1876   rnpA TRUE 0.922 -16.000 0.052 1.000 N NA
 7627252 7627253 SSUBM407_1876 SSUBM407_1877 rnpA argH FALSE 0.256 71.000 0.005 1.000 N NA
 7627253 7627254 SSUBM407_1877 SSUBM407_1878 argH argG TRUE 0.991 14.000 0.278 1.000 Y NA
 7627254 7627255 SSUBM407_1878 SSUBM407_1879 argG   FALSE 0.103 194.000 0.000 NA   NA
 7627255 7627256 SSUBM407_1879 SSUBM407_1880     TRUE 0.605 73.000 0.107 NA   NA
 7627256 7627257 SSUBM407_1880 SSUBM407_1881     FALSE 0.207 106.000 0.000 NA   NA
 7627259 7627260 SSUBM407_1883 SSUBM407_1884 mmuM mmuP TRUE 0.983 13.000 0.093 1.000 Y NA
 7627260 7627261 SSUBM407_1884 SSUBM407_1885 mmuP gltX FALSE 0.073 137.000 0.000 1.000 N NA
 7627261 7627262 SSUBM407_1885 SSUBM407_1886 gltX   TRUE 0.408 72.000 0.008 NA   NA
 7627262 7627263 SSUBM407_1886 SSUBM407_1887     TRUE 0.495 92.000 0.071 NA   NA
 7627263 7627264 SSUBM407_1887 SSUBM407_1888     TRUE 0.993 5.000 0.714 NA   NA
 7627264 7627265 SSUBM407_1888 SSUBM407_1889     FALSE 0.124 178.000 0.000 NA   NA
 7627265 7627266 SSUBM407_1889 SSUBM407_1890     TRUE 0.449 208.000 0.278 NA   NA
 7627266 7627267 SSUBM407_1890 SSUBM407_1891   sms FALSE 0.175 124.000 0.009 1.000 N NA
 7627267 7627268 SSUBM407_1891 SSUBM407_1892 sms   TRUE 0.845 7.000 0.003 NA N NA
 7627268 7627269 SSUBM407_1892 SSUBM407_1893     TRUE 0.850 7.000 0.005 NA N NA
 7627269 7627270 SSUBM407_1893 SSUBM407_1894     FALSE 0.094 106.000 0.000 1.000 N NA
 7627270 7627271 SSUBM407_1894 SSUBM407_1895     TRUE 0.999 1.000 0.720 0.009 Y NA
 7627271 7627272 SSUBM407_1895 SSUBM407_1896     TRUE 0.954 -7.000 0.080 1.000 N NA
 7627273 7627274 SSUBM407_1897 SSUBM407_1898 gpsA hasC TRUE 0.604 45.000 0.032 1.000 N NA
 7627275 7627276 SSUBM407_1899 SSUBM407_1900     TRUE 0.948 -16.000 0.037 1.000   NA
 7627276 7627277 SSUBM407_1900 SSUBM407_1901     TRUE 0.699 41.000 0.006 1.000   NA
 7627277 7627278 SSUBM407_1901 SSUBM407_1902   dapD TRUE 0.985 10.000 0.372 1.000   NA
 7627278 7627279 SSUBM407_1902 SSUBM407_1903 dapD   FALSE 0.062 275.000 0.000 NA   NA
 7627279 7627280 SSUBM407_1903 SSUBM407_1904     FALSE 0.096 200.000 0.000 NA   NA
 7627280 7627281 SSUBM407_1904 SSUBM407_1905     FALSE 0.207 106.000 0.000 NA   NA
 7627281 7627282 SSUBM407_1905 SSUBM407_1906   pgi FALSE 0.302 66.000 0.000 1.000   NA
 7627282 7627283 SSUBM407_1906 SSUBM407_1907 pgi   FALSE 0.245 82.000 0.000 NA   NA
 7627283 7627284 SSUBM407_1907 SSUBM407_m0012     FALSE 0.164 138.000 0.000 NA   NA
 7627284 7627285 SSUBM407_m0012 SSUBM407_1908     TRUE 0.578 41.000 0.000 NA   NA
 7627285 7627286 SSUBM407_1908 SSUBM407_1909   tkt FALSE 0.024 280.000 0.000 1.000 N NA
 7627286 7627287 SSUBM407_1909 SSUBM407_1910 tkt   FALSE 0.088 211.000 0.000 NA   NA
 7627287 7627288 SSUBM407_1910 SSUBM407_1911     TRUE 0.643 110.000 0.231 NA   NA
 7627288 7627289 SSUBM407_1911 SSUBM407_1912     FALSE 0.183 125.000 0.000 NA   NA
 7627289 7627290 SSUBM407_1912 SSUBM407_1913     FALSE 0.243 85.000 0.000 NA   NA
 7627290 7627291 SSUBM407_1913 SSUBM407_1914     TRUE 0.998 0.000 0.700 1.000 Y NA
 7627291 7627292 SSUBM407_1914 SSUBM407_1915     TRUE 0.996 6.000 0.536 1.000 Y NA
 7627292 7627293 SSUBM407_1915 SSUBM407_1916     TRUE 0.993 11.000 0.328 1.000 Y NA
 7627293 7627294 SSUBM407_1916 SSUBM407_1917     TRUE 0.934 63.000 0.279 0.012 Y NA
 7627294 7627295 SSUBM407_1917 SSUBM407_1918     TRUE 0.905 59.000 0.431 0.015   NA
 7627295 7627296 SSUBM407_1918 SSUBM407_1919     FALSE 0.043 328.000 0.000 1.000   NA
 7627296 7627297 SSUBM407_1919 SSUBM407_1920     FALSE 0.039 206.000 0.000 1.000 N NA
 7627297 7627298 SSUBM407_1920 SSUBM407_1921   glnQ5 FALSE 0.014 366.000 0.000 1.000 N NA
 7627298 7627299 SSUBM407_1921 SSUBM407_1922 glnQ5   TRUE 0.976 10.000 0.031 1.000 Y NA
 7627299 7627300 SSUBM407_1922 SSUBM407_1923     TRUE 0.997 13.000 0.594 0.024 Y NA
 7627300 7627301 SSUBM407_1923 SSUBM407_1924     FALSE 0.155 148.000 0.000 NA   NA
 7627301 7627302 SSUBM407_1924 SSUBM407_1925     FALSE 0.039 344.000 0.000 NA   NA
 7627302 7627303 SSUBM407_1925 SSUBM407_1926     TRUE 0.906 44.000 0.273 NA   NA
 7627303 7627304 SSUBM407_1926 SSUBM407_1927     TRUE 0.983 19.000 0.500 NA   NA
 7627304 7627305 SSUBM407_1927 SSUBM407_1928     TRUE 0.998 2.000 0.500 0.012 Y NA
 7627305 7627306 SSUBM407_1928 SSUBM407_1929     TRUE 0.944 13.000 0.064 0.012 N NA
 7627306 7627307 SSUBM407_1929 SSUBM407_1930     TRUE 0.481 92.000 0.064 1.000   NA
 7627307 7627308 SSUBM407_1930 SSUBM407_1931     TRUE 0.865 7.000 0.000 1.000   NA
 7627308 7627309 SSUBM407_1931 SSUBM407_1932     TRUE 0.982 -3.000 0.000 0.020 Y NA
 7627309 7627310 SSUBM407_1932 SSUBM407_1933   leuS FALSE 0.055 175.000 0.000 1.000 N NA
 7627310 7627311 SSUBM407_1933 SSUBM407_1934 leuS pepO FALSE 0.097 103.000 0.000 1.000 N NA
 7627311 7627312 SSUBM407_1934 SSUBM407_1935 pepO   FALSE 0.322 56.000 0.000 0.054 N NA
 7627312 7627313 SSUBM407_1935 SSUBM407_1936     TRUE 0.998 -7.000 0.443 0.009 Y NA
 7627313 7627314 SSUBM407_1936 SSUBM407_1937     TRUE 0.997 -7.000 0.432 1.000 Y NA
 7627314 7627315 SSUBM407_1937 SSUBM407_1938     FALSE 0.030 402.000 0.000 NA   NA
 7627315 7627316 SSUBM407_1938 SSUBM407_1939     TRUE 0.701 27.000 0.000 NA   NA
 7627318 7627319 SSUBM407_1941 SSUBM407_1942     FALSE 0.241 86.000 0.000 NA   NA
 7627319 7627320 SSUBM407_1942 SSUBM407_1943     FALSE 0.323 64.000 0.000 NA   NA
 7627320 7627321 SSUBM407_1943 SSUBM407_1944     TRUE 0.905 1.000 0.000 NA   NA
 7627321 7627322 SSUBM407_1944 SSUBM407_1945     FALSE 0.124 178.000 0.000 NA   NA
 7627322 7627323 SSUBM407_1945 SSUBM407_1946     FALSE 0.198 113.000 0.000 NA   NA
 7627323 7627324 SSUBM407_1946 SSUBM407_1947     FALSE 0.323 64.000 0.000 NA   NA
 7627324 7627325 SSUBM407_1947 SSUBM407_1948   relA TRUE 0.969 2.000 0.177 1.000 N NA
 7627327 7627328 SSUBM407_1950 SSUBM407_1951 srtC3 srtC4 TRUE 0.998 0.000 0.800 NA Y NA
 7627328 7627329 SSUBM407_1951 SSUBM407_1952 srtC4 srtC5 TRUE 0.869 -22.000 0.000 NA   NA
 7627329 7627330 SSUBM407_1952 SSUBM407_1953 srtC5   FALSE 0.064 273.000 0.000 NA   NA
 7627330 7627331 SSUBM407_1953 SSUBM407_1954     TRUE 0.739 24.000 0.000 NA   NA
 7627331 7627332 SSUBM407_1954 SSUBM407_1955     TRUE 0.544 44.000 0.000 NA   NA
 7627332 7627333 SSUBM407_1955 SSUBM407_1955a     TRUE 0.951 -1.000 0.000 0.003   NA
 7627333 7627334 SSUBM407_1955a SSUBM407_1956     FALSE 0.106 192.000 0.000 NA   NA
 7627334 7627335 SSUBM407_1956 SSUBM407_1957     FALSE 0.017 937.000 0.000 NA   NA
 7627335 7627336 SSUBM407_1957 SSUBM407_1958     TRUE 0.878 4.000 0.000 NA   NA
 7627336 7627337 SSUBM407_1958 SSUBM407_1959     TRUE 0.984 2.000 0.227 NA   NA
 7627337 7627338 SSUBM407_1959 SSUBM407_1960     FALSE 0.020 599.000 0.000 NA   NA
 7627338 7627339 SSUBM407_1960 SSUBM407_1961     TRUE 0.971 2.000 0.100 NA   NA
 7627339 7627340 SSUBM407_1961 SSUBM407_1962     TRUE 0.897 2.000 0.000 NA   NA
 7627342 7627343 SSUBM407_1964 SSUBM407_1965 nrdG   TRUE 0.405 187.000 0.159 1.000   NA
 7627343 7627344 SSUBM407_1965 SSUBM407_1966     TRUE 0.896 2.000 0.000 1.000   NA
 7627344 7627345 SSUBM407_1966 SSUBM407_1967     TRUE 0.897 2.000 0.000 NA   NA
 7627345 7627346 SSUBM407_1967 SSUBM407_1968   nrdD TRUE 0.461 99.000 0.062 NA   NA
 7627348 7627349 SSUBM407_1970 SSUBM407_1971     TRUE 0.767 22.000 0.000 NA   NA
 7627349 7627350 SSUBM407_1971 SSUBM407_1972     TRUE 0.992 -3.000 0.392 NA   NA
 7627350 7627351 SSUBM407_1972 SSUBM407_1973   mutS FALSE 0.171 132.000 0.000 NA   NA
 7627351 7627352 SSUBM407_1973 SSUBM407_1974 mutS argR TRUE 0.832 15.000 0.008 1.000 N NA
 7627353 7627354 SSUBM407_1975 SSUBM407_1976 argS   FALSE 0.120 180.000 0.000 NA   NA
 7627358 10784653 SSUBM407_1980d SSUBM407_1980 malX   TRUE 0.858 -992.000 0.000 NA   NA
 10784653 7627359 SSUBM407_1980 SSUBM407_1981   malC FALSE 0.024 480.000 0.000 NA   NA
 7627359 7627360 SSUBM407_1981 SSUBM407_1982 malC malD TRUE 0.998 2.000 0.714 0.024 Y NA
 7627360 7627361 SSUBM407_1982 SSUBM407_1983 malD malA TRUE 0.776 60.000 0.200 NA   NA
 7627361 7627362 SSUBM407_1983 SSUBM407_1984 malA malR TRUE 0.985 10.000 0.364 NA   NA
 7627362 7627363 SSUBM407_1984 SSUBM407_1985 malR   TRUE 0.823 24.000 0.054 1.000 N NA
 7627364 7627365 SSUBM407_1986 SSUBM407_1987 nrdI   FALSE 0.257 77.000 0.000 NA   NA
 7627365 7627366 SSUBM407_1987 SSUBM407_1988   aspS TRUE 0.945 -13.000 0.016 NA   NA
 7627366 7627367 SSUBM407_1988 SSUBM407_1989 aspS   FALSE 0.225 96.000 0.000 1.000   NA
 7627367 7627368 SSUBM407_1989 SSUBM407_1990     TRUE 0.859 10.000 0.000 1.000   NA
 7627368 7627369 SSUBM407_1990 SSUBM407_1991     FALSE 0.289 70.000 0.000 NA   NA
 7627369 7627370 SSUBM407_1991 SSUBM407_1992     TRUE 0.434 33.000 0.000 NA N NA
 7627370 7627371 SSUBM407_1992 SSUBM407_1993     FALSE 0.036 362.000 0.000 1.000   NA
 7627371 7627372 SSUBM407_1993 SSUBM407_1994     TRUE 0.601 39.000 0.000 1.000   NA
 7627373 7627374 SSUBM407_1995 SSUBM407_1996     TRUE 0.915 -3.000 0.000 NA   NA
 7627375 7627376 SSUBM407_1997 SSUBM407_1998     FALSE 0.239 86.000 0.000 1.000   NA
 7627376 7627377 SSUBM407_1998 SSUBM407_1999     FALSE 0.168 133.000 0.000 NA   NA
 7627377 7627378 SSUBM407_1999 SSUBM407_2000   rpsD FALSE 0.305 66.000 0.000 NA   NA
 7627378 7627379 SSUBM407_2000 SSUBM407_2001 rpsD   TRUE 0.366 59.000 0.000 NA   NA
 7627379 7627380 SSUBM407_2001 SSUBM407_2002   veg TRUE 0.480 49.000 0.000 NA   NA
 7627380 7627381 SSUBM407_2002 SSUBM407_2003 veg dnaC TRUE 0.953 4.000 0.053 NA   NA
 7627381 7627382 SSUBM407_2003 SSUBM407_2004 dnaC rplI TRUE 0.824 32.000 0.100 1.000 N NA
 7627382 7627383 SSUBM407_2004 SSUBM407_2005 rplI   TRUE 0.945 11.000 0.119 1.000 N NA
 7627383 7627384 SSUBM407_2005 SSUBM407_2006   gidA FALSE 0.204 107.000 0.011 1.000 N NA
 7627384 7627385 SSUBM407_2006 SSUBM407_2007 gidA   TRUE 0.904 -3.000 0.005 1.000 N NA
 7627385 7627386 SSUBM407_2007 SSUBM407_2008     TRUE 0.887 -10.000 0.000 0.017 N NA
 7627386 7627387 SSUBM407_2008 SSUBM407_2009     TRUE 0.808 17.000 0.000 0.017 N NA
 7627387 7627388 SSUBM407_2009 SSUBM407_2010     FALSE 0.072 142.000 0.000 NA N NA
 7627391 7627392 SSUBM407_2013 SSUBM407_2014 sdhB sdhA TRUE 0.994 13.000 0.221 0.001 Y NA
 7627393 7627394 SSUBM407_2015 SSUBM407_2016     TRUE 0.346 132.000 0.041 1.000   NA
 7627394 7627395 SSUBM407_2016 SSUBM407_2017     TRUE 0.992 -7.000 0.136 1.000 Y NA
 7627395 7627396 SSUBM407_2017 SSUBM407_2018     TRUE 0.998 -24.000 0.713 0.024 Y NA
 7627396 7627397 SSUBM407_2018 SSUBM407_2019   pgsA TRUE 0.924 -3.000 0.015 1.000 N NA
 7627397 7627398 SSUBM407_2019 SSUBM407_2020 pgsA   TRUE 0.953 10.000 0.077 1.000   NA
 7627398 7627399 SSUBM407_2020 SSUBM407_2021     TRUE 0.633 82.000 0.156 1.000   NA
 7627399 7627400 SSUBM407_2021 SSUBM407_2022     TRUE 0.998 -3.000 0.872 0.004   NA
 7627401 7627402 SSUBM407_2023 SSUBM407_2024   recF TRUE 0.981 3.000 0.209 1.000   NA
 7627403 7627404 SSUBM407_2025 SSUBM407_2026 guaB trsA FALSE 0.065 232.000 0.002 1.000 N NA
 7627404 7627405 SSUBM407_2026 SSUBM407_m0013 trsA   TRUE 0.820 18.000 0.000 NA   NA
 7627406 7627407 SSUBM407_2027 SSUBM407_2028     TRUE 0.513 65.000 0.027 NA   NA
 7627407 7627408 SSUBM407_2028 SSUBM407_2029     FALSE 0.117 307.000 0.040 NA   NA
 7627409 7627410 SSUBM407_2030 SSUBM407_2031     TRUE 0.808 25.000 0.003 NA   NA
 7627411 7627412 SSUBM407_2032 SSUBM407_2033 htrA   TRUE 0.368 61.000 0.015 1.000 N NA
 7627412 7625300 SSUBM407_2033 SSUBM407_0001   dnaA FALSE 0.061 242.000 0.002 1.000 N NA
 7625282 7625283 SSUBM407_p001 SSUBM407_p002     FALSE 0.231 92.000 0.000 1.000   NA
 7625283 7625284 SSUBM407_p002 SSUBM407_p003     TRUE 0.829 17.000 0.000 1.000   NA
 7625284 7625285 SSUBM407_p003 SSUBM407_p004     TRUE 0.896 2.000 0.000 1.000   NA
 7625286 7625287 SSUBM407_p005 SSUBM407_p006     FALSE 0.293 69.000 0.000 NA   NA
 7625287 7625288 SSUBM407_p006 SSUBM407_p007     TRUE 0.878 4.000 0.000 NA   NA
 7625290 7625291 SSUBM407_p009 SSUBM407_p010   repR FALSE 0.156 146.000 0.000 NA   NA
 7625291 7625292 SSUBM407_p010 SSUBM407_p011 repR   FALSE 0.015 2716.000 0.000 NA   NA
 7625292 7625293 SSUBM407_p011 SSUBM407_p012     FALSE 0.016 1598.000 0.000 NA   NA
 7625295 7625296 SSUBM407_p014 SSUBM407_p015   rexA TRUE 0.382 182.000 0.000 0.053 Y NA
 7625296 7625297 SSUBM407_p015 SSUBM407_p016 rexA rexB TRUE 0.985 -33.000 0.070 0.053 Y NA
 7625297 7625298 SSUBM407_p016 SSUBM407_p017 rexB mrp FALSE 0.053 291.000 0.000 NA   NA
 7625298 7625299 SSUBM407_p017 SSUBM407_p018 mrp   TRUE 0.654 33.000 0.000 NA   NA