MicrobesOnline Operon Predictions for Burkholderia pseudomallei MSHR346

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 7545588 7545589 GBP346_A0002 GBP346_A0003 rpmH   TRUE 0.849 17.000 0.787 1.000   NA
 7545589 7545590 GBP346_A0003 GBP346_A0004     TRUE 0.657 80.000 0.540 NA   NA
 7545590 7545591 GBP346_A0004 GBP346_A0005     TRUE 0.795 9.000 0.461 NA   NA
 7545595 7545596 GBP346_A0009 GBP346_A0010 trmE   FALSE 0.142 169.000 0.008 1.000   NA
 7545597 7545598 GBP346_A0011 GBP346_A0012     FALSE 0.022 140.000 0.000 NA   NA
 7545598 7545599 GBP346_A0012 GBP346_A0013     TRUE 0.854 -3.000 0.800 NA   NA
 7545599 7545600 GBP346_A0013 GBP346_A0014     TRUE 0.778 -7.000 0.800 NA   NA
 7545600 7545601 GBP346_A0014 GBP346_A0015     FALSE 0.001 368.000 0.000 NA   NA
 7545601 7545602 GBP346_A0015 GBP346_A0016     TRUE 0.840 0.000 0.500 NA   NA
 7545602 7545603 GBP346_A0016 GBP346_A0017     FALSE 0.003 253.000 0.000 NA   NA
 7545603 7545604 GBP346_A0017 GBP346_A0018     FALSE 0.001 408.000 0.000 NA   NA
 7545606 7545607 GBP346_A0020 GBP346_A0021     FALSE 0.002 273.000 0.000 NA   NA
 7545609 7545610 GBP346_A0023 GBP346_A0024     FALSE 0.000 650.000 0.000 NA   NA
 7545610 7545611 GBP346_A0024 GBP346_A0025     FALSE 0.000 988.000 0.000 NA   NA
 7545612 7545613 GBP346_A0026 GBP346_A0027     FALSE 0.461 63.000 0.128 NA   NA
 7545615 7545616 GBP346_A0029 GBP346_A0030 speG   FALSE 0.335 12.000 0.027 NA   NA
 7545616 7545617 GBP346_A0030 GBP346_A0031     FALSE 0.003 242.000 0.000 NA   NA
 7545617 7545618 GBP346_A0031 GBP346_A0032     FALSE 0.025 216.000 0.028 NA   NA
 7545620 7545621 GBP346_A0034 GBP346_A0035   alkA TRUE 0.923 -3.000 0.087 0.060 N NA
 7545621 7545622 GBP346_A0035 GBP346_A0036 alkA   FALSE 0.122 1.000 0.000 NA   NA
 7545622 7545623 GBP346_A0036 GBP346_A0037   gshA_1 FALSE 0.052 39.000 0.000 NA   NA
 7545624 7545625 GBP346_A0038 GBP346_A0039     FALSE 0.002 263.000 0.000 NA   NA
 7545625 7545626 GBP346_A0039 GBP346_A0040     FALSE 0.048 89.000 0.000 NA   NA
 7545626 7545627 GBP346_A0040 GBP346_A0041     FALSE 0.051 44.000 0.000 NA   NA
 7545627 7545628 GBP346_A0041 GBP346_A0042     TRUE 0.799 103.000 0.750 NA N NA
 7545629 7545630 GBP346_A0043 GBP346_A0044 potF_1   TRUE 0.716 29.000 0.176 NA N NA
 7545630 7545631 GBP346_A0044 GBP346_A0045   aguB FALSE 0.402 11.000 0.042 NA   NA
 7545632 7545633 GBP346_A0046 GBP346_A0047     TRUE 0.700 -28.000 0.667 NA   NA
 7545635 7545636 GBP346_A0049 GBP346_A0050     FALSE 0.107 -3.000 0.000 NA   NA
 7545636 7545637 GBP346_A0050 GBP346_A0051     FALSE 0.000 1272.000 0.000 NA   NA
 7545638 7545639 GBP346_A0052 GBP346_A0053     FALSE 0.331 56.000 0.061 NA   NA
 7545639 7545640 GBP346_A0053 GBP346_A0054     TRUE 0.663 38.000 0.486 NA   NA
 7545643 7545644 GBP346_A0057 GBP346_A0058     FALSE 0.119 211.000 0.087 1.000   NA
 7545644 7545645 GBP346_A0058 GBP346_A0059     FALSE 0.474 60.000 0.022 1.000   NA
 7545645 7545646 GBP346_A0059 GBP346_A0060     FALSE 0.245 -3.000 0.003 NA   NA
 7545647 7545648 GBP346_A0061 GBP346_A0062 def_1 fmt TRUE 0.953 32.000 0.105 0.025 Y NA
 7545650 7545651 GBP346_A0064 GBP346_A0065     TRUE 0.683 110.000 0.062 1.000 N NA
 7545651 7545652 GBP346_A0065 GBP346_A0066     FALSE 0.039 165.000 0.007 NA   NA
 7545652 7545653 GBP346_A0066 GBP346_A0067   sun FALSE 0.012 168.000 0.000 NA   NA
 7545653 7545654 GBP346_A0067 GBP346_A0068 sun   FALSE 0.600 -3.000 0.094 NA   NA
 7545654 7545655 GBP346_A0068 GBP346_A0069     TRUE 0.872 2.000 0.810 NA   NA
 7545655 7545656 GBP346_A0069 GBP346_A0070     TRUE 0.904 1.000 0.605 1.000   NA
 7545656 7545657 GBP346_A0070 GBP346_A0071     FALSE 0.052 60.000 0.000 NA   NA
 7545657 7545658 GBP346_A0071 GBP346_A0072     FALSE 0.032 129.000 0.000 NA   NA
 7545658 7545659 GBP346_A0072 GBP346_A0073     FALSE 0.143 -19.000 0.005 NA   NA
 7545659 7545660 GBP346_A0073 GBP346_A0074     TRUE 0.692 94.000 0.270 1.000   NA
 7545660 7545661 GBP346_A0074 GBP346_A0075   queD TRUE 0.800 20.000 0.139 1.000 N NA
 7545661 7545662 GBP346_A0075 GBP346_A0076 queD   FALSE 0.188 32.000 0.015 NA   NA
 7545662 7545663 GBP346_A0076 GBP346_A0077     TRUE 0.715 65.000 0.750 NA   NA
 7545663 7545664 GBP346_A0077 GBP346_A0078     FALSE 0.554 34.000 0.214 NA   NA
 7545664 7545665 GBP346_A0078 GBP346_A0079     TRUE 0.870 -3.000 0.417 1.000   NA
 7545666 7545667 GBP346_A0080 GBP346_A0081 mrdB mrdA TRUE 0.825 12.000 0.073 1.000 N NA
 7545667 7545668 GBP346_A0081 GBP346_A0082 mrdA   FALSE 0.117 5.000 0.000 NA   NA
 7545668 7545669 GBP346_A0082 GBP346_A0083   mreD FALSE 0.054 27.000 0.000 NA   NA
 7545669 7545670 GBP346_A0083 GBP346_A0084 mreD mreC TRUE 0.988 -3.000 0.550 0.003 Y NA
 7545670 7545671 GBP346_A0084 GBP346_A0085 mreC   TRUE 0.834 120.000 0.689 1.000 N NA
 7545672 7545673 GBP346_A0086 GBP346_A0087     TRUE 0.971 113.000 0.643 0.002 Y NA
 7545673 7545674 GBP346_A0087 GBP346_A0088     TRUE 0.990 3.000 0.492 0.002 Y NA
 7545674 7545675 GBP346_A0088 GBP346_A0089     FALSE 0.354 127.000 0.016 1.000   NA
 7545675 7545676 GBP346_A0089 GBP346_A0090   xth_1 FALSE 0.484 33.000 0.024 1.000   NA
 7545679 7545680 GBP346_A0093 GBP346_A0094     FALSE 0.350 -10.000 0.054 NA   NA
 7545680 7545681 GBP346_A0094 GBP346_A0095   metW FALSE 0.518 12.000 0.087 NA   NA
 7545681 7545682 GBP346_A0095 GBP346_A0096 metW metX TRUE 0.822 -3.000 0.509 NA   NA
 7545682 7545683 GBP346_A0096 GBP346_A0097 metX   FALSE 0.036 349.000 0.006 1.000 N NA
 7545683 7545684 GBP346_A0097 GBP346_A0098     TRUE 0.608 -33.000 0.122 1.000   NA
 7545684 7545685 GBP346_A0098 GBP346_A0099     TRUE 0.737 -3.000 0.069 1.000   NA
 7545685 7545686 GBP346_A0099 GBP346_A0100     FALSE 0.137 21.000 0.003 NA   NA
 7545687 7545688 GBP346_A0101 GBP346_A0102     FALSE 0.279 18.000 0.030 NA   NA
 7545688 7545689 GBP346_A0102 GBP346_A0103     TRUE 0.960 20.000 0.682 1.000 Y NA
 7545690 7545691 GBP346_A0104 GBP346_A0105 hslU hslV TRUE 0.977 10.000 0.752 1.000 Y NA
 7545691 7545692 GBP346_A0105 GBP346_A0106 hslV dksA FALSE 0.359 156.000 0.011 1.000 N NA
 7545692 7545693 GBP346_A0106 GBP346_A0107 dksA   FALSE 0.003 539.000 0.045 NA   NA
 7545693 7545694 GBP346_A0107 GBP346_A0108     FALSE 0.106 178.000 0.094 NA   NA
 7545694 7545695 GBP346_A0108 GBP346_A0109   xerC FALSE 0.590 89.000 0.110 1.000   NA
 7545695 7545696 GBP346_A0109 GBP346_A0110 xerC   TRUE 0.722 31.000 0.714 NA   NA
 7545696 7545697 GBP346_A0110 GBP346_A0111   dapF FALSE 0.510 48.000 0.175 NA   NA
 7545697 7545698 GBP346_A0111 GBP346_A0112 dapF   TRUE 0.665 41.000 0.010 1.000 N NA
 7545704 7545705 GBP346_A0118 GBP346_A0119     FALSE 0.002 268.000 0.000 NA   NA
 7545705 7545706 GBP346_A0119 GBP346_A0120     FALSE 0.375 122.000 0.125 NA   NA
 7545706 7545707 GBP346_A0120 GBP346_A0121     FALSE 0.319 -3.000 0.014 NA   NA
 7545710 7545711 GBP346_A0124 GBP346_A0125     FALSE 0.306 41.000 0.053 NA   NA
 7545712 7545713 GBP346_A0126 GBP346_A0127     FALSE 0.200 134.000 0.062 NA   NA
 7545713 7545714 GBP346_A0127 GBP346_A0128     TRUE 0.831 35.000 0.312 1.000 N NA
 7545714 7545715 GBP346_A0128 GBP346_A0129     FALSE 0.463 79.000 0.150 NA   NA
 7545717 7545718 GBP346_A0131 GBP346_A0132   fliJ TRUE 0.968 57.000 0.317 0.007 Y NA
 7545718 7545719 GBP346_A0132 GBP346_A0133 fliJ fliI TRUE 0.958 6.000 0.070 1.000 Y NA
 7545719 7545720 GBP346_A0133 GBP346_A0134 fliI   TRUE 0.940 -6.000 0.115 1.000 Y NA
 7545720 7545721 GBP346_A0134 GBP346_A0135   fliG TRUE 0.976 -7.000 0.320 0.004 Y NA
 7545721 7545722 GBP346_A0135 GBP346_A0136 fliG fliF TRUE 0.970 -10.000 0.220 0.007 Y NA
 7545723 7545724 GBP346_A0137 GBP346_A0138 fliE fliS TRUE 0.959 68.000 0.149 0.004 Y NA
 7545724 7545725 GBP346_A0138 GBP346_A0139 fliS   TRUE 0.819 -3.000 0.189 1.000   NA
 7545725 7545726 GBP346_A0139 GBP346_A0140     FALSE 0.595 110.000 0.143 1.000   NA
 7545726 7545727 GBP346_A0140 GBP346_A0141     FALSE 0.573 -3.000 0.000 1.000   NA
 7545727 7545728 GBP346_A0141 GBP346_A0142     FALSE 0.019 218.000 0.016 NA   NA
 7545729 7545730 GBP346_A0143 GBP346_A0144     FALSE 0.276 199.000 0.113 1.000 N NA
 7545730 7545731 GBP346_A0144 GBP346_A0145     FALSE 0.135 242.000 0.075 1.000 N NA
 7545731 7545732 GBP346_A0145 GBP346_A0146     TRUE 0.979 -3.000 0.143 0.016 Y NA
 7545732 7545733 GBP346_A0146 GBP346_A0147   fpr_1 FALSE 0.020 414.000 0.000 1.000 N NA
 7545733 7545734 GBP346_A0147 GBP346_A0148 fpr_1   FALSE 0.242 213.000 0.133 1.000 N NA
 7545734 7545735 GBP346_A0148 GBP346_A0149     TRUE 0.708 66.000 0.714 NA   NA
 7545735 7545736 GBP346_A0149 GBP346_A0150     TRUE 0.858 7.000 0.833 NA   NA
 7545736 7545737 GBP346_A0150 GBP346_A0151     FALSE 0.046 97.000 0.000 NA   NA
 7545738 7545739 GBP346_A0152 GBP346_A0153     FALSE 0.540 72.000 0.065 1.000   NA
 7545739 7545740 GBP346_A0153 GBP346_A0154   hip FALSE 0.377 135.000 0.065 1.000   NA
 7545740 7545741 GBP346_A0154 GBP346_A0155 hip   FALSE 0.085 231.000 0.074 1.000   NA
 7545741 7545742 GBP346_A0155 GBP346_A0157     FALSE 0.561 46.000 0.231 NA   NA
 7545744 7545745 GBP346_A0158 GBP346_A0159     TRUE 0.930 112.000 0.072 0.063 Y NA
 7545745 7545746 GBP346_A0159 GBP346_A0160     TRUE 0.970 75.000 0.779 0.063 Y NA
 7545746 7545747 GBP346_A0160 GBP346_A0161     TRUE 0.980 2.000 0.560 1.000 Y NA
 7545747 7545748 GBP346_A0161 GBP346_A0162     TRUE 0.988 -3.000 0.377 0.001 Y NA
 7545748 7545749 GBP346_A0162 GBP346_A0163     TRUE 0.727 5.000 0.188 NA   NA
 7545750 7545751 GBP346_A0164 GBP346_A0165     TRUE 0.862 -3.000 0.939 NA   NA
 7545753 7545754 GBP346_A0167 GBP346_A0168     FALSE 0.595 59.000 0.092 1.000   NA
 7545754 7545755 GBP346_A0168 GBP346_A0169     TRUE 0.965 -3.000 0.155 1.000 Y NA
 7545758 7545759 GBP346_A0172 GBP346_A0173     TRUE 0.888 122.000 0.110 1.000 Y NA
 7545759 7545760 GBP346_A0173 GBP346_A0174     TRUE 0.722 64.000 0.060 1.000 N NA
 7545760 7545761 GBP346_A0174 GBP346_A0175     TRUE 0.866 -3.000 0.087 1.000 N NA
 7545762 7545763 GBP346_A0176 GBP346_A0177     FALSE 0.004 219.000 0.000 NA   NA
 7545765 7545766 GBP346_A0179 GBP346_A0180     TRUE 0.856 26.000 0.211 0.003   NA
 7545766 7545767 GBP346_A0180 GBP346_A0181     FALSE 0.569 104.000 0.330 NA   NA
 7545768 7545769 GBP346_A0182 GBP346_A0183 flgB flgC TRUE 0.974 84.000 0.714 0.004 Y NA
 7545769 7545770 GBP346_A0183 GBP346_A0184 flgC   TRUE 0.907 54.000 0.221 NA Y NA
 7545770 7545771 GBP346_A0184 GBP346_A0185     TRUE 0.885 28.000 0.093 NA Y NA
 7545771 7545772 GBP346_A0185 GBP346_A0186   flgF TRUE 0.975 27.000 0.533 0.004 Y NA
 7545772 7545773 GBP346_A0186 GBP346_A0187 flgF flgG TRUE 0.974 34.000 0.357 0.001 Y NA
 7545773 7545774 GBP346_A0187 GBP346_A0188 flgG flgH TRUE 0.974 21.000 0.463 0.007 Y NA
 7545774 7545775 GBP346_A0188 GBP346_A0189 flgH flgI TRUE 0.975 -6.000 0.256 0.008 Y NA
 7545775 7545776 GBP346_A0189 GBP346_A0190 flgI flgJ TRUE 0.983 1.000 0.131 0.008 Y NA
 7545776 7545777 GBP346_A0190 GBP346_A0191 flgJ   FALSE 0.289 216.000 0.000 NA Y NA
 7545777 7545778 GBP346_A0191 GBP346_A0192   flgK FALSE 0.592 65.000 0.057 NA N NA
 7545778 7545779 GBP346_A0192 GBP346_A0193 flgK flgL TRUE 0.969 16.000 0.074 0.002 Y NA
 7545779 7545780 GBP346_A0193 GBP346_A0194 flgL   FALSE 0.402 118.000 0.133 NA   NA
 7545780 7545781 GBP346_A0194 GBP346_A0195     FALSE 0.501 59.000 0.158 NA   NA
 7545781 7545782 GBP346_A0195 GBP346_A0196     TRUE 0.686 -3.000 0.158 NA   NA
 7545784 7545785 GBP346_A0198 GBP346_A0199     TRUE 0.989 -3.000 0.571 0.002 Y NA
 7545785 7545786 GBP346_A0199 GBP346_A0200     FALSE 0.397 -12.000 0.074 NA   NA
 7545788 7545789 GBP346_A0202 GBP346_A0203     FALSE 0.230 18.000 0.018 NA   NA
 7545791 7545792 GBP346_A0205 GBP346_A0206     FALSE 0.297 144.000 0.188 NA   NA
 7545793 7545794 GBP346_A0207 GBP346_A0208     TRUE 0.737 60.000 0.875 NA   NA
 7545794 7545795 GBP346_A0208 GBP346_A0209     FALSE 0.003 252.000 0.000 NA   NA
 7545795 7545796 GBP346_A0209 GBP346_A0210     TRUE 0.655 -42.000 0.571 NA   NA
 7545796 7545797 GBP346_A0210 GBP346_A0211     TRUE 0.764 -3.000 0.286 NA   NA
 7545797 7545798 GBP346_A0211 GBP346_A0212   hpnI_1 FALSE 0.336 -33.000 0.069 NA   NA
 7545798 7545799 GBP346_A0212 GBP346_A0213 hpnI_1   FALSE 0.095 382.000 0.000 1.000 Y NA
 7545799 7545800 GBP346_A0213 GBP346_A0214     TRUE 0.654 102.000 0.583 NA   NA
 7545800 7545801 GBP346_A0214 GBP346_A0215     FALSE 0.009 182.000 0.000 NA   NA
 7545801 7545802 GBP346_A0215 GBP346_A0216     FALSE 0.057 21.000 0.000 NA   NA
 7545803 7545804 GBP346_A0217 GBP346_A0218     TRUE 0.677 20.000 0.429 NA   NA
 7545804 7545805 GBP346_A0218 GBP346_A0219     FALSE 0.367 128.000 0.143 NA   NA
 7545807 7545808 GBP346_A0221 GBP346_A0222   gor FALSE 0.035 197.000 0.026 NA   NA
 7545810 7545811 GBP346_A0224 GBP346_A0225 argG_1   FALSE 0.091 126.000 0.004 NA   NA
 7545811 7545812 GBP346_A0225 GBP346_A0226     FALSE 0.570 108.000 0.333 NA   NA
 7545812 7545813 GBP346_A0226 GBP346_A0227     FALSE 0.082 13.000 0.000 NA   NA
 7545813 7545814 GBP346_A0227 GBP346_A0228     FALSE 0.052 61.000 0.000 NA   NA
 7545814 7545815 GBP346_A0228 GBP346_A0229     FALSE 0.001 337.000 0.000 NA   NA
 7545817 7545818 GBP346_A0231 GBP346_A0232     FALSE 0.002 300.000 0.000 NA   NA
 7545818 7545819 GBP346_A0232 GBP346_A0233     FALSE 0.595 -3.000 0.091 NA   NA
 7545819 7545820 GBP346_A0233 GBP346_A0234     TRUE 0.687 0.000 0.127 NA   NA
 7545820 7545821 GBP346_A0234 GBP346_A0236     FALSE 0.220 34.000 0.025 NA   NA
 7545823 7545824 GBP346_A0237 GBP346_A0238     TRUE 0.975 11.000 0.750 1.000 Y NA
 7545824 7545825 GBP346_A0238 GBP346_A0239     TRUE 0.945 -3.000 1.000 1.000 N NA
 7545825 7545826 GBP346_A0239 GBP346_A0240     TRUE 0.836 -3.000 0.625 NA   NA
 7545826 7545827 GBP346_A0240 GBP346_A0241     TRUE 0.849 4.000 0.600 NA   NA
 7545827 7545828 GBP346_A0241 GBP346_A0242     FALSE 0.558 114.000 0.333 NA   NA
 7545829 7545830 GBP346_A0243 GBP346_A0244 glmS_1 glmU TRUE 0.886 64.000 0.010 1.000 Y NA
 7545830 7545831 GBP346_A0244 GBP346_A0245 glmU   FALSE 0.129 39.000 0.003 NA   NA
 7545831 7545832 GBP346_A0245 GBP346_A0246     FALSE 0.004 234.000 0.000 NA   NA
 7545832 7545833 GBP346_A0246 GBP346_A0247   folB_1 TRUE 0.768 -3.000 0.059 NA N NA
 7545833 7545834 GBP346_A0247 GBP346_A0248 folB_1   TRUE 0.662 82.000 0.211 1.000   NA
 7545835 7545836 GBP346_A0249 GBP346_A0250     FALSE 0.371 18.000 0.058 NA   NA
 7545836 7545837 GBP346_A0250 GBP346_A0251     FALSE 0.322 -3.000 0.014 NA   NA
 7545838 7545839 GBP346_A0252 GBP346_A0253     FALSE 0.023 312.000 0.143 NA   NA
 7545839 7545840 GBP346_A0253 GBP346_A0254     TRUE 0.949 -3.000 0.026 1.000 Y NA
 7545840 7545841 GBP346_A0254 GBP346_A0255     TRUE 0.883 -3.000 0.128 1.000 N NA
 7545841 7545842 GBP346_A0255 GBP346_A0256     FALSE 0.437 171.000 0.176 1.000 N NA
 7545842 7545843 GBP346_A0256 GBP346_A0257     FALSE 0.480 63.000 0.143 NA   NA
 7545843 7545844 GBP346_A0257 GBP346_A0258     FALSE 0.315 57.000 0.056 NA   NA
 7545846 7545847 GBP346_A0259 GBP346_A0261     TRUE 0.688 -42.000 0.750 NA   NA
 7545848 7545849 GBP346_A0262 GBP346_A0263     TRUE 0.863 34.000 0.560 1.000 N NA
 7545849 7545850 GBP346_A0263 GBP346_A0264     FALSE 0.334 106.000 0.080 NA   NA
 7545852 7545853 GBP346_A0266 GBP346_A0267     FALSE 0.484 95.000 0.174 NA   NA
 7545856 7545857 GBP346_A0270 GBP346_A0271     FALSE 0.352 6.000 0.017 NA   NA
 7545857 7545858 GBP346_A0271 GBP346_A0272     FALSE 0.448 56.000 0.119 NA   NA
 7545858 7545859 GBP346_A0272 GBP346_A0273     TRUE 0.921 86.000 0.176 1.000 Y NA
 7545859 7545860 GBP346_A0273 GBP346_A0274     FALSE 0.591 5.000 0.079 NA   NA
 7545860 7545861 GBP346_A0274 GBP346_A0275     FALSE 0.181 25.000 0.013 NA   NA
 7545865 7545866 GBP346_A0278 GBP346_A0280     TRUE 0.720 47.000 0.769 NA   NA
 7545866 7545867 GBP346_A0280 GBP346_A0281     FALSE 0.003 238.000 0.000 NA   NA
 7545868 7545869 GBP346_A0282 GBP346_A0283     TRUE 0.860 -3.000 0.880 NA   NA
 7545869 7545870 GBP346_A0283 GBP346_A0284     FALSE 0.324 102.000 0.074 NA   NA
 7545871 7545872 GBP346_A0285 GBP346_A0286     TRUE 0.682 28.000 0.500 NA   NA
 7545873 7545874 GBP346_A0287 GBP346_A0288     TRUE 0.746 57.000 1.000 NA   NA
 7545875 7545876 GBP346_A0289 GBP346_A0290 dapA_1   FALSE 0.223 131.000 0.065 NA   NA
 7545876 7545877 GBP346_A0290 GBP346_A0291     TRUE 0.635 -43.000 0.500 NA   NA
 7545877 7545878 GBP346_A0291 GBP346_A0292     FALSE 0.001 395.000 0.000 NA   NA
 7545881 7545882 GBP346_A0295 GBP346_A0296     FALSE 0.244 49.000 0.033 NA   NA
 7545882 7545883 GBP346_A0296 GBP346_A0297     FALSE 0.004 235.000 0.000 NA   NA
 7545883 7545884 GBP346_A0297 GBP346_A0298     FALSE 0.015 503.000 0.000 1.000 N NA
 7545884 7545885 GBP346_A0298 GBP346_A0299     TRUE 0.692 73.000 0.667 NA   NA
 7545891 7545892 GBP346_A0305 GBP346_A0306     FALSE 0.001 314.000 0.000 NA   NA
 7545892 7545893 GBP346_A0306 GBP346_A0308     TRUE 0.764 -3.000 0.286 NA   NA
 7545895 7545896 GBP346_A0309 GBP346_A0310     TRUE 0.979 33.000 0.600 0.001 Y NA
 7545896 7545897 GBP346_A0310 GBP346_A0312     TRUE 0.762 15.000 0.526 NA   NA
 7545900 7545901 GBP346_A0314 GBP346_A0315 bioB bioD TRUE 0.945 73.000 0.025 0.002 Y NA
 7545901 7545902 GBP346_A0315 GBP346_A0316 bioD bioF TRUE 0.982 -3.000 0.121 0.002 Y NA
 7545902 7545903 GBP346_A0316 GBP346_A0317 bioF bioA TRUE 0.978 -3.000 0.054 0.002 Y NA
 7545905 7545906 GBP346_A0319 GBP346_A0320     FALSE 0.125 164.000 0.075 NA   NA
 7545906 7545907 GBP346_A0320 GBP346_A0321     FALSE 0.181 32.000 0.014 NA   NA
 7545907 7545908 GBP346_A0321 GBP346_A0322     FALSE 0.055 25.000 0.000 NA   NA
 7545908 7545909 GBP346_A0322 GBP346_A0323     FALSE 0.574 31.000 0.070 1.000   NA
 7545909 7545910 GBP346_A0323 GBP346_A0324     TRUE 0.767 -13.000 0.087 1.000 N NA
 7545910 7545911 GBP346_A0324 GBP346_A0325   aceK TRUE 0.789 58.000 0.158 1.000 N NA
 7545911 7545912 GBP346_A0325 GBP346_A0326 aceK   FALSE 0.514 -3.000 0.059 NA   NA
 7545914 7545915 GBP346_A0328 GBP346_A0329     FALSE 0.062 234.000 0.032 1.000   NA
 7545915 7545916 GBP346_A0329 GBP346_A0330     FALSE 0.226 98.000 0.034 NA   NA
 7545916 7545917 GBP346_A0330 GBP346_A0331     FALSE 0.041 196.000 0.034 NA   NA
 7545917 7545918 GBP346_A0331 GBP346_A0332     FALSE 0.454 -19.000 0.118 NA   NA
 7545920 7545921 GBP346_A0334 GBP346_A0335     TRUE 0.807 17.000 0.434 1.000   NA
 7545921 7545922 GBP346_A0335 GBP346_A0336     TRUE 0.806 52.000 0.573 NA N NA
 7545922 7545923 GBP346_A0336 GBP346_A0337   argS FALSE 0.598 67.000 0.062 NA N NA
 7545924 7545925 GBP346_A0338 GBP346_A0339     FALSE 0.491 104.000 0.200 NA   NA
 7545926 7545927 GBP346_A0340 GBP346_A0341 metH   TRUE 0.953 46.000 0.041 0.001 Y NA
 7545927 7545928 GBP346_A0341 GBP346_A0342     FALSE 0.152 188.000 0.216 NA   NA
 7545928 7545929 GBP346_A0342 GBP346_A0343     FALSE 0.137 183.000 0.162 NA   NA
 7545929 7545930 GBP346_A0343 GBP346_A0344     FALSE 0.441 79.000 0.130 NA   NA
 7545931 7545932 GBP346_A0345 GBP346_A0346     FALSE 0.365 -3.000 0.022 NA   NA
 7545932 7545933 GBP346_A0346 GBP346_A0347     FALSE 0.258 80.000 0.044 NA   NA
 7545933 7545934 GBP346_A0347 GBP346_A0348     TRUE 0.624 90.000 0.413 NA   NA
 7545934 7545935 GBP346_A0348 GBP346_A0349     FALSE 0.449 37.000 0.121 NA   NA
 7545935 7545936 GBP346_A0349 GBP346_A0350     FALSE 0.050 67.000 0.000 NA   NA
 7545938 7545939 GBP346_A0352 GBP346_A0353   rfaE_1 FALSE 0.398 141.000 0.119 1.000   NA
 7545940 7545941 GBP346_A0354 GBP346_A0355     FALSE 0.156 104.000 0.015 NA   NA
 7545941 7545942 GBP346_A0355 GBP346_A0356     TRUE 0.893 6.000 0.147 1.000 N NA
 7545942 7545943 GBP346_A0356 GBP346_A0357     FALSE 0.024 272.000 0.000 1.000   NA
 7545943 7545944 GBP346_A0357 GBP346_A0358     FALSE 0.551 74.000 0.074 1.000   NA
 7545945 7545946 GBP346_A0359 GBP346_A0360     TRUE 0.973 -3.000 0.922 NA Y NA
 7545946 7545947 GBP346_A0360 GBP346_A0361     TRUE 0.942 24.000 0.750 NA Y NA
 7545947 7545948 GBP346_A0361 GBP346_A0362     TRUE 0.609 19.000 0.239 NA   NA
 7545948 7545949 GBP346_A0362 GBP346_A0363     FALSE 0.429 32.000 0.103 NA   NA
 7545949 7545950 GBP346_A0363 GBP346_A0364     FALSE 0.564 106.000 0.320 NA   NA
 7545950 7545951 GBP346_A0364 GBP346_A0365     FALSE 0.513 47.000 0.179 NA   NA
 7545951 7545952 GBP346_A0365 GBP346_A0366     FALSE 0.004 776.000 0.079 NA   NA
 7545952 7545953 GBP346_A0366 GBP346_A0367     TRUE 0.830 90.000 0.390 1.000 N NA
 7545953 7545954 GBP346_A0367 GBP346_A0368     TRUE 0.683 -3.000 0.155 NA   NA
 7545956 7545957 GBP346_A0370 GBP346_A0371   lipB FALSE 0.214 93.000 0.028 NA   NA
 7545957 7545958 GBP346_A0371 GBP346_A0372 lipB lipA TRUE 0.979 -7.000 0.319 0.001 Y NA
 7545958 7545959 GBP346_A0372 GBP346_A0374 lipA   FALSE 0.131 36.000 0.004 NA   NA
 7545960 7545961 GBP346_A0373 GBP346_A0375   ggt_1 FALSE 0.379 128.000 0.032 1.000   NA
 7545962 7545963 GBP346_A0376 GBP346_A0377     FALSE 0.008 186.000 0.000 NA   NA
 7545965 7545966 GBP346_A0379 GBP346_A0380     TRUE 0.947 55.000 0.450 1.000 Y NA
 7545966 7545967 GBP346_A0380 GBP346_A0381     TRUE 0.973 10.000 0.050 0.005 Y NA
 7545967 7545968 GBP346_A0381 GBP346_A0382     TRUE 0.862 26.000 0.500 1.000 N NA
 7545968 7545969 GBP346_A0382 GBP346_A0383     FALSE 0.001 377.000 0.000 NA   NA
 7545969 7545970 GBP346_A0383 GBP346_A0384     TRUE 0.704 12.000 0.263 NA   NA
 7545970 7545971 GBP346_A0384 GBP346_A0385   dctA FALSE 0.010 368.000 0.000 1.000   NA
 7545971 7545972 GBP346_A0385 GBP346_A0386 dctA   TRUE 0.810 3.000 0.000 1.000 N NA
 7545972 7545973 GBP346_A0386 GBP346_A0387     TRUE 0.875 49.000 0.000 1.000 Y NA
 7545975 7545976 GBP346_A0389 GBP346_A0391     FALSE 0.000 540.000 0.000 NA   NA
 7545977 7545978 GBP346_A0390 GBP346_A0392     FALSE 0.403 18.000 0.069 NA   NA
 7545979 7545980 GBP346_A0393 GBP346_A0394     FALSE 0.476 22.000 0.125 NA   NA
 7545981 7545982 GBP346_A0395 GBP346_A0396     FALSE 0.196 138.000 0.074 NA   NA
 7545983 7545984 GBP346_A0397 GBP346_A0398   amt TRUE 0.802 33.000 0.189 1.000 N NA
 7545984 7545985 GBP346_A0398 GBP346_A0399 amt gshA_2 FALSE 0.011 359.000 0.000 1.000   NA
 7545985 7545986 GBP346_A0399 GBP346_A0400 gshA_2 gshB TRUE 0.634 28.000 0.120 1.000   NA
 7545986 7545987 GBP346_A0400 GBP346_A0401 gshB   FALSE 0.323 173.000 0.048 1.000 N NA
 7545987 7545988 GBP346_A0401 GBP346_A0402   ptsH TRUE 0.967 77.000 0.261 0.002 Y NA
 7545988 7545989 GBP346_A0402 GBP346_A0403 ptsH ptsP TRUE 0.836 178.000 0.205 0.002 Y NA
 7545989 7545990 GBP346_A0403 GBP346_A0404 ptsP   FALSE 0.256 63.000 0.037 NA   NA
 7545991 7545992 GBP346_A0405 GBP346_A0406     TRUE 0.707 105.000 0.082 1.000 N NA
 7545992 7545993 GBP346_A0406 GBP346_A0407     FALSE 0.155 221.000 0.036 1.000 N NA
 7545994 7545995 GBP346_A0408 GBP346_A0409   grxC TRUE 0.834 12.000 0.269 NA N NA
 7545995 7545996 GBP346_A0409 GBP346_A0410 grxC secB TRUE 0.764 117.000 0.221 1.000 N NA
 7545996 7545997 GBP346_A0410 GBP346_A0411 secB gpsA TRUE 0.805 17.000 0.097 1.000 N NA
 7545997 7545998 GBP346_A0411 GBP346_A0412 gpsA   FALSE 0.387 120.000 0.127 NA   NA
 7545999 7546000 GBP346_A0413 GBP346_A0414     TRUE 0.702 -3.000 0.045 1.000   NA
 7546001 7546002 GBP346_A0415 GBP346_A0416     FALSE 0.015 237.000 0.018 NA   NA
 7546002 7546003 GBP346_A0416 GBP346_A0417     FALSE 0.404 50.000 0.095 NA   NA
 7546003 7546004 GBP346_A0417 GBP346_A0418   ctaD_1 TRUE 0.977 44.000 0.741 0.003 Y NA
 7546004 7546005 GBP346_A0418 GBP346_A0419 ctaD_1   FALSE 0.329 24.000 0.057 NA   NA
 7546005 7546006 GBP346_A0419 GBP346_A0420     FALSE 0.301 22.000 0.046 NA   NA
 7546006 7546007 GBP346_A0420 GBP346_A0421     FALSE 0.538 17.000 0.129 NA   NA
 7546007 7546008 GBP346_A0421 GBP346_A0422     FALSE 0.323 134.000 0.152 NA   NA
 7546010 7546011 GBP346_A0424 GBP346_A0425     FALSE 0.457 149.000 0.722 NA   NA
 7546011 7546012 GBP346_A0425 GBP346_A0426     TRUE 0.706 44.000 0.255 1.000   NA
 7546012 7546013 GBP346_A0426 GBP346_A0427   cyoE TRUE 0.963 13.000 0.321 1.000 Y NA
 7546013 7546014 GBP346_A0427 GBP346_A0428 cyoE   FALSE 0.473 20.000 0.009 1.000   NA
 7546016 7546017 GBP346_A0430 GBP346_A0431     TRUE 0.829 -3.000 0.571 NA   NA
 7546017 7546018 GBP346_A0431 GBP346_A0432     TRUE 0.818 1.000 0.389 NA   NA
 7546018 7546019 GBP346_A0432 GBP346_A0433     FALSE 0.003 251.000 0.000 NA   NA
 7546019 7546020 GBP346_A0433 GBP346_A0434     FALSE 0.048 319.000 0.562 NA   NA
 7546020 7546021 GBP346_A0434 GBP346_A0435     TRUE 0.914 1.000 0.771 1.000   NA
 7546021 7546022 GBP346_A0435 GBP346_A0436     FALSE 0.006 207.000 0.000 NA   NA
 7546022 7546023 GBP346_A0436 GBP346_A0437     TRUE 0.673 -22.000 0.500 NA   NA
 7546023 7546024 GBP346_A0437 GBP346_A0438     TRUE 0.831 6.000 0.200 1.000   NA
 7546025 7546026 GBP346_A0439 GBP346_A0440     FALSE 0.436 44.000 0.114 NA   NA
 7546028 7546029 GBP346_A0441 GBP346_A0443     TRUE 0.776 76.000 0.167 1.000 N NA
 7546029 7546030 GBP346_A0443 GBP346_A0444     TRUE 0.724 45.000 0.800 NA   NA
 7546030 7546031 GBP346_A0444 GBP346_A0445     FALSE 0.527 75.000 0.211 NA   NA
 7546031 7546032 GBP346_A0445 GBP346_A0446     TRUE 0.830 -7.000 0.158 1.000 N NA
 7546032 7546033 GBP346_A0446 GBP346_A0447     TRUE 0.912 6.000 0.250 1.000 N NA
 7546033 7546034 GBP346_A0447 GBP346_A0448     TRUE 0.870 -3.000 0.417 1.000   NA
 7546034 7546035 GBP346_A0448 GBP346_A0449     TRUE 0.769 40.000 0.500 1.000   NA
 7546035 7546036 GBP346_A0449 GBP346_A0450     TRUE 0.930 2.000 0.375 1.000 N NA
 7546036 7546037 GBP346_A0450 GBP346_A0451     TRUE 0.969 -3.000 0.625 NA Y NA
 7546037 7546038 GBP346_A0451 GBP346_A0452     TRUE 0.945 18.000 0.571 NA Y NA
 7546038 7546039 GBP346_A0452 GBP346_A0453     TRUE 0.881 8.000 0.133 1.000 N NA
 7546039 7546040 GBP346_A0453 GBP346_A0454     FALSE 0.582 -10.000 0.200 NA   NA
 7546040 7546041 GBP346_A0454 GBP346_A0455     TRUE 0.796 5.000 0.333 NA   NA
 7546041 7546042 GBP346_A0455 GBP346_A0456     TRUE 0.655 19.000 0.333 NA   NA
 7546042 7546043 GBP346_A0456 GBP346_A0457     TRUE 0.841 -3.000 0.667 NA   NA
 7546043 7546044 GBP346_A0457 GBP346_A0458     TRUE 0.659 33.000 0.444 NA   NA
 7546044 7546045 GBP346_A0458 GBP346_A0459     TRUE 0.619 56.000 0.333 NA   NA
 7546045 7546046 GBP346_A0459 GBP346_A0460     TRUE 0.647 80.000 0.500 NA   NA
 7546047 7546048 GBP346_A0461 GBP346_A0462     FALSE 0.067 743.000 0.000 0.064 Y NA
 7546048 7546049 GBP346_A0462 GBP346_A0463   nagA TRUE 0.682 99.000 0.049 1.000 N NA
 7546049 7546050 GBP346_A0463 GBP346_A0464 nagA   TRUE 0.781 -16.000 0.122 1.000 N NA
 7546050 7546051 GBP346_A0464 GBP346_A0465     TRUE 0.803 58.000 0.200 1.000 N NA
 7546051 7546052 GBP346_A0465 GBP346_A0466   nagE TRUE 0.961 113.000 0.258 0.002 Y NA
 7546053 7546054 GBP346_A0467 GBP346_A0468     FALSE 0.005 211.000 0.000 NA   NA
 7546054 7546055 GBP346_A0468 GBP346_A0469     FALSE 0.003 244.000 0.000 NA   NA
 7546055 7546056 GBP346_A0469 GBP346_A0470     FALSE 0.107 -3.000 0.000 NA   NA
 7546056 7546057 GBP346_A0470 GBP346_A0471     FALSE 0.221 28.000 0.023 NA   NA
 7546057 7546058 GBP346_A0471 GBP346_A0472   cydB_1 FALSE 0.283 19.000 0.034 NA   NA
 7546058 7546059 GBP346_A0472 GBP346_A0473 cydB_1 cydA TRUE 0.967 38.000 0.474 0.058 Y NA
 7546059 7546060 GBP346_A0473 GBP346_A0474 cydA   TRUE 0.736 -10.000 0.625 NA   NA
 7546060 7546061 GBP346_A0474 GBP346_A0475   rpoH FALSE 0.001 479.000 0.000 NA   NA
 7546061 7546062 GBP346_A0475 GBP346_A0476 rpoH   FALSE 0.019 198.000 0.005 NA   NA
 7546063 7546064 GBP346_A0477 GBP346_A0478     TRUE 0.634 42.000 0.381 NA   NA
 7546067 7546068 GBP346_A0481 GBP346_A0482     FALSE 0.012 648.000 0.000 0.067   NA
 7546068 7546069 GBP346_A0482 GBP346_A0483     TRUE 0.671 -3.000 0.026 1.000   NA
 7546069 7546070 GBP346_A0483 GBP346_A0484     TRUE 0.708 -3.000 0.048 1.000   NA
 7546070 7546071 GBP346_A0484 GBP346_A0485   nirB_1 TRUE 0.960 13.000 0.539 0.001 N NA
 7546072 7546073 GBP346_A0486 GBP346_A0487   maiA FALSE 0.247 -13.000 0.027 NA   NA
 7546073 7546074 GBP346_A0487 GBP346_A0489 maiA   FALSE 0.227 38.000 0.027 NA   NA
 7546076 7546077 GBP346_A0490 GBP346_A0491   coaD TRUE 0.808 111.000 0.367 1.000 N NA
 7546077 7546078 GBP346_A0491 GBP346_A0492 coaD   FALSE 0.346 -48.000 0.088 NA   NA
 7546079 7546080 GBP346_A0493 GBP346_A0494 hisC_1 pth TRUE 0.650 86.000 0.014 1.000 N NA
 7546080 7546081 GBP346_A0494 GBP346_A0495 pth   TRUE 0.962 114.000 0.496 0.024 Y NA
 7546081 7546082 GBP346_A0495 GBP346_A0496     FALSE 0.451 164.000 0.122 1.000 N NA
 7546082 7546083 GBP346_A0496 GBP346_A0497     FALSE 0.051 47.000 0.000 NA   NA
 7546083 7546084 GBP346_A0497 GBP346_A0498   ispE FALSE 0.052 53.000 0.000 NA   NA
 7546084 7546085 GBP346_A0498 GBP346_A0499 ispE lolB TRUE 0.789 34.000 0.157 1.000 N NA
 7546085 7546086 GBP346_A0499 GBP346_A0500 lolB   TRUE 0.886 -3.000 0.139 1.000 N NA
 7546087 7546088 GBP346_A0501 GBP346_A0502 mutM mutY TRUE 0.977 5.000 0.021 0.003 Y NA
 7546089 7546090 GBP346_A0503 GBP346_A0504     FALSE 0.297 27.000 0.047 NA   NA
 7546090 7546091 GBP346_A0504 GBP346_A0505     FALSE 0.504 86.000 0.194 NA   NA
 7546091 7546092 GBP346_A0505 GBP346_A0506     TRUE 0.886 129.000 0.177 1.000 Y NA
 7546092 7546093 GBP346_A0506 GBP346_A0507   raiA FALSE 0.189 224.000 0.309 NA N NA
 7546093 7546094 GBP346_A0507 GBP346_A0508 raiA rpoN_1 FALSE 0.575 150.000 0.574 NA N NA
 7546094 7546095 GBP346_A0508 GBP346_A0509 rpoN_1   FALSE 0.381 136.000 0.075 1.000   NA
 7546095 7546096 GBP346_A0509 GBP346_A0510   lptA TRUE 0.825 -3.000 0.543 NA   NA
 7546096 7546097 GBP346_A0510 GBP346_A0511 lptA   TRUE 0.694 19.000 0.459 NA   NA
 7546097 7546098 GBP346_A0511 GBP346_A0512     TRUE 0.842 6.000 0.617 NA   NA
 7546098 7546099 GBP346_A0512 GBP346_A0513     TRUE 0.889 -3.000 0.598 1.000   NA
 7546100 7546101 GBP346_A0514 GBP346_A0515   apt TRUE 0.825 -3.000 0.022 1.000 N NA
 7546101 7546102 GBP346_A0515 GBP346_A0516 apt   TRUE 0.660 94.000 0.022 1.000 N NA
 7546102 7546103 GBP346_A0516 GBP346_A0517     TRUE 0.734 13.000 0.124 1.000   NA
 7546103 7546104 GBP346_A0517 GBP346_A0518   purU_1 TRUE 0.816 52.000 0.955 1.000   NA
 7546105 7546106 GBP346_A0519 GBP346_A0520   uvrA FALSE 0.019 201.000 0.007 NA   NA
 7546107 7546108 GBP346_A0521 GBP346_A0522     TRUE 0.646 114.000 0.037 1.000 N NA
 7546109 7546110 GBP346_A0523 GBP346_A0524     TRUE 0.745 54.000 1.000 NA   NA
 7546116 7546117 GBP346_A0530 GBP346_A0531     FALSE 0.048 76.000 0.000 NA   NA
 7546117 7546118 GBP346_A0531 GBP346_A0532     FALSE 0.021 144.000 0.000 NA   NA
 7546118 7546119 GBP346_A0532 GBP346_A0533     TRUE 0.603 52.000 0.308 NA   NA
 7546119 7546120 GBP346_A0533 GBP346_A0534     TRUE 0.788 -3.000 0.357 NA   NA
 7546120 7546121 GBP346_A0534 GBP346_A0535     FALSE 0.500 22.000 0.143 NA   NA
 7546121 7546122 GBP346_A0535 GBP346_A0536     TRUE 0.611 -27.000 0.333 NA   NA
 7546122 7546123 GBP346_A0536 GBP346_A0537     FALSE 0.054 30.000 0.000 NA   NA
 7546123 7546124 GBP346_A0537 GBP346_A0538     FALSE 0.006 207.000 0.000 NA   NA
 7546126 7546127 GBP346_A0540 GBP346_A0541     TRUE 0.784 18.000 1.000 NA   NA
 7546127 7546128 GBP346_A0541 GBP346_A0542     FALSE 0.004 227.000 0.000 NA   NA
 7546128 7546129 GBP346_A0542 GBP346_A0543     FALSE 0.003 242.000 0.000 NA   NA
 7546129 7546130 GBP346_A0543 GBP346_A0544     TRUE 0.841 -3.000 0.667 NA   NA
 7546131 7546132 GBP346_A0545 GBP346_A0546     TRUE 0.698 11.000 0.226 NA   NA
 7546132 7546133 GBP346_A0546 GBP346_A0547     TRUE 0.820 -3.000 0.194 1.000   NA
 7546133 7546134 GBP346_A0547 GBP346_A0548     TRUE 0.966 2.000 0.889 0.001   NA
 7546134 7546135 GBP346_A0548 GBP346_A0549     FALSE 0.520 92.000 0.205 NA   NA
 7546135 7546136 GBP346_A0549 GBP346_A0550     FALSE 0.481 70.000 0.154 NA   NA
 7546138 7546139 GBP346_A0552 GBP346_A0553     FALSE 0.591 65.000 0.286 NA   NA
 7546140 7546141 GBP346_A0554 GBP346_A0555     TRUE 0.779 77.000 0.667 1.000   NA
 7546141 7546142 GBP346_A0555 GBP346_A0556     TRUE 0.951 35.000 0.545 1.000 Y NA
 7546142 7546143 GBP346_A0556 GBP346_A0557     TRUE 0.808 -3.000 0.455 NA   NA
 7546143 7546144 GBP346_A0557 GBP346_A0558     TRUE 0.713 -33.000 0.800 NA   NA
 7546145 7546146 GBP346_A0559 GBP346_A0560     TRUE 0.802 28.000 0.667 1.000   NA
 7546146 7546147 GBP346_A0560 GBP346_A0561     TRUE 0.669 50.000 0.500 NA   NA
 7546147 7546148 GBP346_A0561 GBP346_A0562     FALSE 0.000 627.000 0.000 NA   NA
 7546149 7546150 GBP346_A0563 GBP346_A0564     TRUE 0.818 -3.000 0.500 NA   NA
 7546150 7546151 GBP346_A0564 GBP346_A0565     TRUE 0.831 -3.000 0.583 NA   NA
 7546151 7546152 GBP346_A0565 GBP346_A0566     TRUE 0.792 -3.000 0.375 NA   NA
 7546152 7546153 GBP346_A0566 GBP346_A0567     TRUE 0.823 -3.000 0.520 NA   NA
 7546153 7546154 GBP346_A0567 GBP346_A0568     TRUE 0.872 -3.000 0.440 1.000   NA
 7546154 7546155 GBP346_A0568 GBP346_A0569     FALSE 0.031 245.000 0.000 1.000   NA
 7546155 7546156 GBP346_A0569 GBP346_A0570     TRUE 0.818 -3.000 0.500 NA   NA
 7546157 7546158 GBP346_A0571 GBP346_A0572     FALSE 0.000 531.000 0.000 NA   NA
 7546158 7546159 GBP346_A0572 GBP346_A0573     TRUE 0.817 33.000 0.636 NA N NA
 7546159 7546160 GBP346_A0573 GBP346_A0574     TRUE 0.938 72.000 0.857 NA Y NA
 7546160 7546161 GBP346_A0574 GBP346_A0575     TRUE 0.731 181.000 0.364 1.000 Y NA
 7546162 7546163 GBP346_A0576 GBP346_A0577     FALSE 0.583 22.000 0.231 NA   NA
 7546164 7546165 GBP346_A0578 GBP346_A0580     FALSE 0.358 92.000 0.081 NA   NA
 7546167 7546168 GBP346_A0581 GBP346_A0582     TRUE 0.802 49.000 0.553 NA N NA
 7546169 7546170 GBP346_A0583 GBP346_A0584     FALSE 0.268 150.000 0.052 1.000   NA
 7546171 7546172 GBP346_A0585 GBP346_A0586     TRUE 0.940 2.000 0.558 1.000 N NA
 7546172 7546173 GBP346_A0586 GBP346_A0587     FALSE 0.460 11.000 0.058 NA   NA
 7546173 7546174 GBP346_A0587 GBP346_A0588     FALSE 0.540 -3.000 0.068 NA   NA
 7546175 7546176 GBP346_A0589 GBP346_A0590 queF ilvA_1 FALSE 0.581 20.000 0.062 1.000   NA
 7546176 7546177 GBP346_A0590 GBP346_A0591 ilvA_1   FALSE 0.002 275.000 0.000 NA   NA
 7546178 7546179 GBP346_A0592 GBP346_A0593     TRUE 0.790 20.000 0.118 1.000 N NA
 7546179 7546180 GBP346_A0593 GBP346_A0594     FALSE 0.578 -3.000 0.084 NA   NA
 7546180 7546181 GBP346_A0594 GBP346_A0595     FALSE 0.361 48.000 0.074 NA   NA
 7546181 7546182 GBP346_A0595 GBP346_A0596     FALSE 0.493 90.000 0.044 1.000   NA
 7546182 7546183 GBP346_A0596 GBP346_A0597     TRUE 0.613 81.000 0.135 1.000   NA
 7546183 7546184 GBP346_A0597 GBP346_A0598   ubiB TRUE 0.835 13.000 0.432 1.000   NA
 7546184 7546185 GBP346_A0598 GBP346_A0599 ubiB   FALSE 0.107 -3.000 0.000 NA   NA
 7546185 7546186 GBP346_A0599 GBP346_A0600     FALSE 0.054 26.000 0.000 NA   NA
 7546186 7546187 GBP346_A0600 GBP346_A0601     FALSE 0.266 101.000 0.050 NA   NA
 7546187 7546188 GBP346_A0601 GBP346_A0602     FALSE 0.511 71.000 0.190 NA   NA
 7546188 7546189 GBP346_A0602 GBP346_A0603   aspS FALSE 0.319 57.000 0.057 NA   NA
 7546189 7546190 GBP346_A0603 GBP346_A0604 aspS nudB FALSE 0.194 210.000 0.050 1.000 N NA
 7546190 7546191 GBP346_A0604 GBP346_A0605 nudB   TRUE 0.874 -3.000 0.105 1.000 N NA
 7546191 7546192 GBP346_A0605 GBP346_A0606     FALSE 0.218 190.000 0.176 1.000   NA
 7546192 7546193 GBP346_A0606 GBP346_A0607     TRUE 0.806 58.000 0.767 1.000   NA
 7546193 7546194 GBP346_A0607 GBP346_A0608     TRUE 0.751 158.000 0.108 1.000 Y NA
 7546194 7546195 GBP346_A0608 GBP346_A0609     TRUE 0.769 180.000 0.588 1.000 Y NA
 7546195 7546196 GBP346_A0609 GBP346_A0610     TRUE 0.936 17.000 0.100 1.000 Y NA
 7546199 7546200 GBP346_A0613 GBP346_A0614     FALSE 0.321 46.000 0.059 NA   NA
 7546201 7546202 GBP346_A0615 GBP346_A0616     FALSE 0.465 12.000 0.064 NA   NA
 7546203 7546204 GBP346_A0617 GBP346_A0618     TRUE 0.852 4.000 0.642 NA   NA
 7546205 7546206 GBP346_A0619 GBP346_A0620     TRUE 0.792 61.000 0.168 1.000 N NA
 7546206 7546207 GBP346_A0620 GBP346_A0621   pdxA TRUE 0.870 22.000 0.561 1.000 N NA
 7546207 7546208 GBP346_A0621 GBP346_A0622 pdxA ksgA TRUE 0.805 32.000 0.197 1.000 N NA
 7546211 7546212 GBP346_A0624 GBP346_A0626     FALSE 0.128 85.000 0.006 NA   NA
 7546212 7546213 GBP346_A0626 GBP346_A0627     FALSE 0.409 48.000 0.099 NA   NA
 7546213 7546214 GBP346_A0627 GBP346_A0628     TRUE 0.822 43.000 0.279 1.000 N NA
 7546214 7546215 GBP346_A0628 GBP346_A0629   glyS TRUE 0.807 18.000 0.123 1.000 N NA
 7546215 7546216 GBP346_A0629 GBP346_A0630 glyS glyQ TRUE 0.984 17.000 0.651 0.001 Y NA
 7546216 7546217 GBP346_A0630 GBP346_A0631 glyQ lnt FALSE 0.075 256.000 0.000 1.000 N NA
 7546217 7546218 GBP346_A0631 GBP346_A0632 lnt   TRUE 0.803 43.000 0.557 NA N NA
 7546218 7546219 GBP346_A0632 GBP346_A0633     FALSE 0.048 503.000 0.019 NA Y NA
 7546219 7546220 GBP346_A0633 GBP346_A0634     FALSE 0.193 21.000 0.014 NA   NA
 7546221 7546222 GBP346_A0635 GBP346_A0636     FALSE 0.039 119.000 0.000 NA   NA
 7546223 7546224 GBP346_A0637 GBP346_A0638   miaB TRUE 0.818 24.000 0.220 1.000 N NA
 7546224 7546225 GBP346_A0638 GBP346_A0639 miaB   FALSE 0.051 52.000 0.000 NA   NA
 7546225 7546226 GBP346_A0639 GBP346_A0640     FALSE 0.047 93.000 0.000 NA   NA
 7546226 7546227 GBP346_A0640 GBP346_A0641     TRUE 0.650 -3.000 0.125 NA   NA
 7546228 7546229 GBP346_A0642 GBP346_A0643     FALSE 0.553 134.000 0.194 NA N NA
 7546229 7546230 GBP346_A0643 GBP346_A0645   ribB FALSE 0.019 424.000 0.000 1.000 N NA
 7546231 7546232 GBP346_A0646 GBP346_A0647     FALSE 0.323 130.000 0.122 NA   NA
 7546232 7546233 GBP346_A0647 GBP346_A0648     FALSE 0.462 77.000 0.146 NA   NA
 7546233 7546234 GBP346_A0648 GBP346_A0649   asnB_1 TRUE 0.892 44.000 0.023 1.000 Y NA
 7546234 7546235 GBP346_A0649 GBP346_A0650 asnB_1   TRUE 0.884 44.000 0.007 1.000 Y NA
 7546235 7546236 GBP346_A0650 GBP346_A0651     TRUE 0.950 39.000 0.017 0.001 Y NA
 7546236 7546237 GBP346_A0651 GBP346_A0652     FALSE 0.525 22.000 0.007 NA N NA
 7546239 7546240 GBP346_A0654 GBP346_A0655   glpK TRUE 0.733 113.000 0.131 1.000 N NA
 7546240 7546241 GBP346_A0655 GBP346_A0656 glpK   TRUE 0.952 52.000 0.032 0.001 Y NA
 7546248 7546249 GBP346_A0663 GBP346_A0664     FALSE 0.592 70.000 0.306 NA   NA
 7546250 7546251 GBP346_A0665 GBP346_A0666 rhlE   TRUE 0.649 128.000 0.088 1.000 N NA
 7546251 7546252 GBP346_A0666 GBP346_A0667     TRUE 0.979 20.000 1.000 0.013 Y NA
 7546253 7546254 GBP346_A0668 GBP346_A0669     TRUE 0.771 -3.000 0.308 NA   NA
 7546259 7546260 GBP346_A0673 GBP346_A0675     TRUE 0.952 50.000 0.636 1.000 Y NA
 7546260 7546261 GBP346_A0675 GBP346_A0676     FALSE 0.590 23.000 0.250 NA   NA
 7546262 7546263 GBP346_A0677 GBP346_A0678     FALSE 0.292 149.000 0.214 NA   NA
 7546264 7546265 GBP346_A0679 GBP346_A0680     FALSE 0.430 81.000 0.125 NA   NA
 7546268 7546269 GBP346_A0683 GBP346_A0684     TRUE 0.704 -3.000 0.182 NA   NA
 7546269 7546270 GBP346_A0684 GBP346_A0685   ybbB FALSE 0.185 50.000 0.016 NA   NA
 7546271 7546272 GBP346_A0686 GBP346_A0687     FALSE 0.317 164.000 0.444 NA   NA
 7546273 7546274 GBP346_A0688 GBP346_A0689     FALSE 0.107 -3.000 0.000 NA   NA
 7546275 7546276 GBP346_A0690 GBP346_A0691     TRUE 0.940 66.000 0.333 1.000 Y NA
 7546277 7546278 GBP346_A0692 GBP346_A0693     TRUE 0.764 -45.000 0.667 1.000   NA
 7546278 7546279 GBP346_A0693 GBP346_A0694   pncB_1 TRUE 0.828 -3.000 0.025 1.000 N NA
 7546279 7546280 GBP346_A0694 GBP346_A0695 pncB_1   FALSE 0.241 151.000 0.038 1.000   NA
 7546281 7546282 GBP346_A0696 GBP346_A0697     FALSE 0.325 -3.000 0.014 NA   NA
 7546282 7546283 GBP346_A0697 GBP346_A0698     TRUE 0.666 66.000 0.500 NA   NA
 7546283 7546284 GBP346_A0698 GBP346_A0699     TRUE 0.740 -9.000 0.600 NA   NA
 7546284 7546285 GBP346_A0699 GBP346_A0700     TRUE 0.764 -3.000 0.286 NA   NA
 7546285 7546286 GBP346_A0700 GBP346_A0701     TRUE 0.983 17.000 0.786 0.003 Y NA
 7546286 7546287 GBP346_A0701 GBP346_A0702     TRUE 0.725 53.000 0.062 1.000 N NA
 7546288 7546289 GBP346_A0703 GBP346_A0704     TRUE 0.755 -10.000 0.750 NA   NA
 7546289 7546290 GBP346_A0704 GBP346_A0705     TRUE 0.818 -3.000 0.500 NA   NA
 7546290 7546291 GBP346_A0705 GBP346_A0706     FALSE 0.439 -10.000 0.088 NA   NA
 7546292 7546293 GBP346_A0707 GBP346_A0708 vasA_1   TRUE 0.694 53.000 0.600 NA   NA
 7546293 7546294 GBP346_A0708 GBP346_A0709     FALSE 0.003 239.000 0.000 NA   NA
 7546295 7546296 GBP346_A0710 GBP346_A0711     FALSE 0.389 30.000 0.000 1.000   NA
 7546297 7546298 GBP346_A0712 GBP346_A0713     TRUE 0.793 -30.000 0.733 1.000   NA
 7546298 7546299 GBP346_A0713 GBP346_A0714     TRUE 0.808 27.000 0.733 1.000   NA
 7546299 7546300 GBP346_A0714 GBP346_A0715     TRUE 0.696 8.000 0.182 NA   NA
 7546302 7546303 GBP346_A0717 GBP346_A0718     FALSE 0.001 484.000 0.000 NA   NA
 7546305 7546306 GBP346_A0720 GBP346_A0721     FALSE 0.051 -24.000 0.000 NA   NA
 7546307 7546308 GBP346_A0722 GBP346_A0723     FALSE 0.048 92.000 0.000 NA   NA
 7546309 7546310 GBP346_A0724 GBP346_A0725     FALSE 0.363 73.000 0.000 1.000   NA
 7546310 7546311 GBP346_A0725 GBP346_A0726     FALSE 0.001 413.000 0.000 NA   NA
 7546311 7546312 GBP346_A0726 GBP346_A0727     FALSE 0.000 519.000 0.000 NA   NA
 7546312 7546313 GBP346_A0727 GBP346_A0728     FALSE 0.002 295.000 0.000 NA   NA
 7546315 7546316 GBP346_A0729 GBP346_A0731     FALSE 0.021 144.000 0.000 NA   NA
 7546316 7546317 GBP346_A0731 GBP346_A0732     FALSE 0.052 37.000 0.000 NA   NA
 7546317 7546318 GBP346_A0732 GBP346_A0733     TRUE 0.688 67.000 0.600 NA   NA
 7546318 7546319 GBP346_A0733 GBP346_A0734     FALSE 0.044 223.000 0.000 1.000   NA
 7546319 7546320 GBP346_A0734 GBP346_A0735     TRUE 0.959 24.000 0.812 1.000 Y NA
 7546321 7546322 GBP346_A0736 GBP346_A0737 recA   TRUE 0.870 0.000 0.296 1.000   NA
 7546322 7546323 GBP346_A0737 GBP346_A0738     FALSE 0.065 145.000 0.010 NA   NA
 7546323 7546324 GBP346_A0738 GBP346_A0739     FALSE 0.345 80.000 0.076 NA   NA
 7546324 7546325 GBP346_A0739 GBP346_A0740   sucD TRUE 0.961 97.000 0.151 0.001 Y NA
 7546325 7546326 GBP346_A0740 GBP346_A0741 sucD   FALSE 0.569 151.000 0.220 1.000 N NA
 7546326 7546327 GBP346_A0741 GBP346_A0742     TRUE 0.817 114.000 0.462 1.000 N NA
 7546327 7546328 GBP346_A0742 GBP346_A0743     FALSE 0.148 238.000 0.229 NA N NA
 7546328 7546329 GBP346_A0743 GBP346_A0744     FALSE 0.315 51.000 0.057 NA   NA
 7546329 7546330 GBP346_A0744 GBP346_A0745     TRUE 0.650 -3.000 0.125 NA   NA
 7546330 7546331 GBP346_A0745 GBP346_A0746     TRUE 0.722 10.000 0.250 NA   NA
 7546331 7546332 GBP346_A0746 GBP346_A0747     TRUE 0.629 17.000 0.222 NA   NA
 7546333 7546334 GBP346_A0748 GBP346_A0749 moaC   FALSE 0.198 12.000 0.003 NA   NA
 7546336 7546337 GBP346_A0751 GBP346_A0752     FALSE 0.272 42.000 0.043 NA   NA
 7546337 7546338 GBP346_A0752 GBP346_A0753     FALSE 0.536 -7.000 0.131 NA   NA
 7546338 7546339 GBP346_A0753 GBP346_A0754     FALSE 0.399 20.000 0.075 NA   NA
 7546339 7546340 GBP346_A0754 GBP346_A0755   rfaF FALSE 0.255 132.000 0.088 NA   NA
 7546340 7546341 GBP346_A0755 GBP346_A0756 rfaF   FALSE 0.362 128.000 0.138 NA   NA
 7546341 7546342 GBP346_A0756 GBP346_A0757   ilvE_1 FALSE 0.554 66.000 0.223 NA   NA
 7546343 7546344 GBP346_A0758 GBP346_A0759     TRUE 0.804 -3.000 0.434 NA   NA
 7546344 7546345 GBP346_A0759 GBP346_A0760   pgk FALSE 0.088 132.000 0.009 NA   NA
 7546345 7546346 GBP346_A0760 GBP346_A0761 pgk   FALSE 0.114 81.000 0.003 NA   NA
 7546346 7546347 GBP346_A0761 GBP346_A0762   pyk_1 FALSE 0.266 -21.000 0.038 NA   NA
 7546347 7546348 GBP346_A0762 GBP346_A0763 pyk_1 fba FALSE 0.504 281.000 0.218 0.004 Y NA
 7546348 7546349 GBP346_A0763 GBP346_A0764 fba purC FALSE 0.263 190.000 0.055 1.000 N NA
 7546349 7546350 GBP346_A0764 GBP346_A0765 purC purE TRUE 0.898 36.000 0.038 1.000 Y NA
 7546350 7546351 GBP346_A0765 GBP346_A0766 purE purK TRUE 0.965 80.000 0.201 0.001 Y NA
 7546351 7546352 GBP346_A0766 GBP346_A0767 purK   TRUE 0.675 12.000 0.027 NA N NA
 7546353 7546354 GBP346_A0768 GBP346_A0769     TRUE 0.895 105.000 0.255 NA Y NA
 7546354 7546355 GBP346_A0769 GBP346_A0770     FALSE 0.005 209.000 0.000 NA   NA
 7546355 7546356 GBP346_A0770 GBP346_A0771   dacB FALSE 0.214 -24.000 0.024 NA   NA
 7546357 7546358 GBP346_A0772 GBP346_A0773     FALSE 0.041 -166.000 0.000 NA   NA
 7546358 7546359 GBP346_A0773 GBP346_A0774     TRUE 0.981 4.000 0.724 1.000 Y NA
 7546359 7546360 GBP346_A0774 GBP346_A0775     FALSE 0.262 136.000 0.111 NA   NA
 7546360 7546361 GBP346_A0775 GBP346_A0776     FALSE 0.538 57.000 0.200 NA   NA
 7546361 7546362 GBP346_A0776 GBP346_A0777     FALSE 0.514 160.000 0.733 1.000   NA
 7546362 7546363 GBP346_A0777 GBP346_A0778     TRUE 0.634 128.000 0.867 NA   NA
 7546363 7546364 GBP346_A0778 GBP346_A0779     TRUE 0.722 28.000 0.700 NA   NA
 7546366 7546367 GBP346_A0781 GBP346_A0782     TRUE 0.710 20.000 0.545 NA   NA
 7546367 7546368 GBP346_A0782 GBP346_A0783     TRUE 0.910 16.000 0.750 1.000 N NA
 7546368 7546369 GBP346_A0783 GBP346_A0784     TRUE 0.951 4.000 0.250 0.056 N NA
 7546369 7546370 GBP346_A0784 GBP346_A0786     TRUE 0.687 88.000 0.667 NA   NA
 7546371 7546372 GBP346_A0785 GBP346_A0787     FALSE 0.355 88.000 0.080 NA   NA
 7546375 7546376 GBP346_A0790 GBP346_A0791   fghA TRUE 0.737 14.000 0.136 1.000   NA
 7546377 7546378 GBP346_A0792 GBP346_A0793     TRUE 0.959 -40.000 0.379 0.099 Y NA
 7546378 7546379 GBP346_A0793 GBP346_A0794     TRUE 0.935 35.000 0.233 1.000 Y NA
 7546379 7546380 GBP346_A0794 GBP346_A0795     FALSE 0.589 190.000 0.080 1.000 Y NA
 7546381 7546382 GBP346_A0796 GBP346_A0797     FALSE 0.206 -45.000 0.029 NA   NA
 7546382 7546383 GBP346_A0797 GBP346_A0798     TRUE 0.863 5.000 0.059 1.000 N NA
 7546383 7546384 GBP346_A0798 GBP346_A0799     TRUE 0.891 -12.000 0.000 1.000 Y NA
 7546384 7546385 GBP346_A0799 GBP346_A0800     TRUE 0.875 51.000 0.000 1.000 Y NA
 7546385 7546386 GBP346_A0800 GBP346_A0801     TRUE 0.978 -3.000 0.148 0.056 Y NA
 7546386 7546387 GBP346_A0801 GBP346_A0802     TRUE 0.988 -3.000 0.918 0.056 Y NA
 7546387 7546388 GBP346_A0802 GBP346_A0803     TRUE 0.703 -3.000 0.045 1.000   NA
 7546388 7546389 GBP346_A0803 GBP346_A0805     TRUE 0.706 61.000 0.250 1.000   NA
 7546390 7546391 GBP346_A0804 GBP346_A0806     FALSE 0.107 -3.000 0.000 NA   NA
 7546391 7546392 GBP346_A0806 GBP346_A0807     FALSE 0.339 145.000 0.087 1.000   NA
 7546393 7546394 GBP346_A0808 GBP346_A0809     TRUE 0.856 -3.000 0.222 NA N NA
 7546395 7546396 GBP346_A0810 GBP346_A0811   xylB_1 TRUE 0.744 87.000 0.109 1.000 N NA
 7546396 7546397 GBP346_A0811 GBP346_A0812 xylB_1   TRUE 0.931 37.000 0.200 1.000 Y NA
 7546397 7546398 GBP346_A0812 GBP346_A0813     FALSE 0.460 172.000 0.229 1.000 N NA
 7546399 7546400 GBP346_A0814 GBP346_A0815     FALSE 0.441 136.000 0.000 1.000 N NA
 7546400 7546401 GBP346_A0815 GBP346_A0816   panE_1 TRUE 0.917 5.000 0.263 1.000 N NA
 7546404 7546405 GBP346_A0819 GBP346_A0820 kynA kynU TRUE 0.936 84.000 0.347 1.000 Y NA
 7546405 7546406 GBP346_A0820 GBP346_A0821 kynU kynB TRUE 0.613 42.000 0.111 1.000   NA
 7546410 7546411 GBP346_A0825 GBP346_A0826     FALSE 0.383 -30.000 0.088 NA   NA
 7546411 7546412 GBP346_A0826 GBP346_A0827     TRUE 0.638 27.000 0.353 NA   NA
 7546412 7546413 GBP346_A0827 GBP346_A0828   pdxH FALSE 0.552 132.000 0.036 1.000 N NA
 7546415 7546416 GBP346_A0830 GBP346_A0831     FALSE 0.227 54.000 0.027 NA   NA
 7546417 7546418 GBP346_A0832 GBP346_A0833     FALSE 0.032 217.000 0.046 NA   NA
 7546419 7546420 GBP346_A0834 GBP346_A0835     FALSE 0.348 -18.000 0.063 NA   NA
 7546421 7546422 GBP346_A0836 GBP346_A0837     TRUE 0.690 71.000 0.040 1.000 N NA
 7546422 7546423 GBP346_A0837 GBP346_A0838   xerD TRUE 0.959 0.000 0.046 1.000 Y NA
 7546425 7546426 GBP346_A0840 GBP346_A0841 ybaK   FALSE 0.498 109.000 0.061 1.000   NA
 7546432 7546433 GBP346_A0847 GBP346_A0848 mviN   TRUE 0.710 10.000 0.069 1.000   NA
 7546434 7546435 GBP346_A0849 GBP346_A0850     TRUE 0.839 -3.000 0.042 1.000 N NA
 7546435 7546436 GBP346_A0850 GBP346_A0851   kdsB FALSE 0.200 209.000 0.056 1.000 N NA
 7546436 7546437 GBP346_A0851 GBP346_A0852 kdsB   FALSE 0.319 174.000 0.265 1.000   NA
 7546437 7546438 GBP346_A0852 GBP346_A0853   lpxK TRUE 0.878 -19.000 0.263 0.001   NA
 7546438 7546439 GBP346_A0853 GBP346_A0854 lpxK   FALSE 0.100 124.000 0.006 NA   NA
 7546440 7546441 GBP346_A0855 GBP346_A0856 xseA   FALSE 0.224 197.000 0.037 1.000 N NA
 7546441 7546442 GBP346_A0856 GBP346_A0857     FALSE 0.025 270.000 0.000 1.000   NA
 7546442 7546443 GBP346_A0857 GBP346_A0858     FALSE 0.303 165.000 0.429 NA   NA
 7546444 7546445 GBP346_A0859 GBP346_A0860     FALSE 0.128 216.000 0.000 1.000 N NA
 7546446 7546447 GBP346_A0861 GBP346_A0862   panE_2 FALSE 0.453 16.000 0.074 NA   NA
 7546457 7546458 GBP346_A0872 GBP346_A0874     TRUE 0.865 -3.000 1.000 NA   NA
 7546460 7546461 GBP346_A0875 GBP346_A0876     FALSE 0.051 64.000 0.000 NA   NA
 7546461 7546462 GBP346_A0876 GBP346_A0877     FALSE 0.052 61.000 0.000 NA   NA
 7546462 7546463 GBP346_A0877 GBP346_A0878     TRUE 0.716 28.000 0.667 NA   NA
 7546463 7546464 GBP346_A0878 GBP346_A0879     TRUE 0.683 -45.000 0.750 NA   NA
 7546465 7546466 GBP346_A0880 GBP346_A0881 fusA_1   FALSE 0.346 125.000 0.115 NA   NA
 7546466 7546467 GBP346_A0881 GBP346_A0882     FALSE 0.292 -3.000 0.010 NA   NA
 7546467 7546468 GBP346_A0882 GBP346_A0883     FALSE 0.002 674.000 0.016 NA   NA
 7546473 7546474 GBP346_A0888 GBP346_A0889 clpS clpA TRUE 0.832 -3.000 0.596 NA   NA
 7546474 7546475 GBP346_A0889 GBP346_A0890 clpA   TRUE 0.643 100.000 0.018 1.000 N NA
 7546475 7546476 GBP346_A0890 GBP346_A0891     TRUE 0.680 88.000 0.636 NA   NA
 7546476 7546477 GBP346_A0891 GBP346_A0892     FALSE 0.260 165.000 0.292 NA   NA
 7546478 7546479 GBP346_A0893 GBP346_A0894   coaBC TRUE 0.802 64.000 0.201 1.000 N NA
 7546479 7546480 GBP346_A0894 GBP346_A0895 coaBC lspA TRUE 0.685 62.000 0.024 1.000 N NA
 7546480 7546481 GBP346_A0895 GBP346_A0896 lspA ileS_1 TRUE 0.876 0.000 0.071 1.000 N NA
 7546481 7546482 GBP346_A0896 GBP346_A0897 ileS_1 ribF TRUE 0.783 112.000 0.254 1.000 N NA
 7546483 7546484 GBP346_A0898 GBP346_A0899 purN   TRUE 0.802 -3.000 0.099 NA N NA
 7546484 7546485 GBP346_A0899 GBP346_A0900     FALSE 0.481 12.000 0.069 NA   NA
 7546485 7546486 GBP346_A0900 GBP346_A0901     FALSE 0.126 206.000 0.078 1.000   NA
 7546488 7546489 GBP346_A0903 GBP346_A0904 nadA nadC TRUE 0.984 -3.000 0.198 0.003 Y NA
 7546490 7546491 GBP346_A0905 GBP346_A0906 nadB rpmG TRUE 0.680 57.000 0.019 1.000 N NA
 7546491 7546492 GBP346_A0906 GBP346_A0907 rpmG rpmB TRUE 0.946 18.000 0.002 0.014 Y NA
 7546492 7546493 GBP346_A0907 GBP346_A0908 rpmB radC TRUE 0.750 36.000 0.091 1.000 N NA
 7546494 7546495 GBP346_A0909 GBP346_A0910   ispH_1 TRUE 0.942 3.000 0.626 1.000 N NA
 7546495 7546496 GBP346_A0910 GBP346_A0911 ispH_1   FALSE 0.002 290.000 0.000 NA   NA
 7546496 7546497 GBP346_A0911 GBP346_A0912     FALSE 0.004 223.000 0.000 NA   NA
 7546497 7546498 GBP346_A0912 GBP346_A0913     TRUE 0.985 11.000 0.917 0.056 Y NA
 7546498 7546499 GBP346_A0913 GBP346_A0914     TRUE 0.939 63.000 0.303 1.000 Y NA
 7546499 7546500 GBP346_A0914 GBP346_A0915     TRUE 0.980 12.000 0.333 0.023 Y NA
 7546500 7546501 GBP346_A0915 GBP346_A0916     FALSE 0.571 45.000 0.250 NA   NA
 7546502 7546503 GBP346_A0917 GBP346_A0918     TRUE 0.669 17.000 0.099 1.000   NA
 7546503 7546504 GBP346_A0918 GBP346_A0919     FALSE 0.081 277.000 0.040 1.000 N NA
 7546506 7546507 GBP346_A0920 GBP346_A0922     FALSE 0.506 33.000 0.160 NA   NA
 7546509 7546510 GBP346_A0924 GBP346_A0925     TRUE 0.936 115.000 0.115 0.059 Y NA
 7546512 7546513 GBP346_A0927 GBP346_A0928     TRUE 0.706 15.000 0.111 1.000   NA
 7546513 7546514 GBP346_A0928 GBP346_A0929     TRUE 0.817 82.000 0.333 1.000 N NA
 7546515 7546516 GBP346_A0930 GBP346_A0931     FALSE 0.353 99.000 0.086 NA   NA
 7546516 7546517 GBP346_A0931 GBP346_A0932     FALSE 0.000 857.000 0.000 NA   NA
 7546517 7546518 GBP346_A0932 GBP346_A0933     FALSE 0.001 436.000 0.000 NA   NA
 7546518 7546519 GBP346_A0933 GBP346_A0934     FALSE 0.004 221.000 0.000 NA   NA
 7546519 7546520 GBP346_A0934 GBP346_A0935     TRUE 0.683 26.000 0.500 NA   NA
 7546522 7546523 GBP346_A0937 GBP346_A0938     FALSE 0.550 24.000 0.200 NA   NA
 7546523 7546524 GBP346_A0938 GBP346_A0939     TRUE 0.852 8.000 0.833 NA   NA
 7546524 7546525 GBP346_A0939 GBP346_A0940     FALSE 0.041 114.000 0.000 NA   NA
 7546525 7546526 GBP346_A0940 GBP346_A0941     FALSE 0.000 707.000 0.000 NA   NA
 7546526 7546527 GBP346_A0941 GBP346_A0942     FALSE 0.009 180.000 0.000 NA   NA
 7546529 7546530 GBP346_A0944 GBP346_A0945     FALSE 0.046 -39.000 0.000 NA   NA
 7546530 7546531 GBP346_A0945 GBP346_A0946     FALSE 0.016 152.000 0.000 NA   NA
 7546531 7546532 GBP346_A0946 GBP346_A0947     FALSE 0.003 242.000 0.000 NA   NA
 7546532 7546533 GBP346_A0947 GBP346_A0948     FALSE 0.000 808.000 0.000 NA   NA
 7546534 7546535 GBP346_A0949 GBP346_A0950     FALSE 0.003 238.000 0.000 NA   NA
 7546538 7546539 GBP346_A0953 GBP346_A0954     TRUE 0.623 84.000 0.429 NA   NA
 7546539 7546540 GBP346_A0954 GBP346_A0955     TRUE 0.744 27.000 0.857 NA   NA
 7546540 7546541 GBP346_A0955 GBP346_A0956     FALSE 0.039 254.000 0.000 NA N NA
 7546541 7546542 GBP346_A0956 GBP346_A0957     FALSE 0.413 -12.000 0.000 1.000   NA
 7546542 7546543 GBP346_A0957 GBP346_A0958     TRUE 0.845 -3.000 0.714 NA   NA
 7546543 7546544 GBP346_A0958 GBP346_A0959     TRUE 0.857 -3.000 0.833 NA   NA
 7546544 7546545 GBP346_A0959 GBP346_A0960     FALSE 0.050 436.000 0.000 NA Y NA
 7546545 7546546 GBP346_A0960 GBP346_A0961     FALSE 0.000 1146.000 0.000 NA   NA
 7546546 7546547 GBP346_A0961 GBP346_A0962     TRUE 0.956 -3.000 0.667 0.001   NA
 7546547 7546548 GBP346_A0962 GBP346_A0963     FALSE 0.033 1724.000 0.000 1.000 Y NA
 7546548 7546549 GBP346_A0963 GBP346_A0964     FALSE 0.156 205.000 0.000 1.000 N NA
 7546549 7546550 GBP346_A0964 GBP346_A0965     FALSE 0.044 223.000 0.000 1.000   NA
 7546550 7546551 GBP346_A0965 GBP346_A0966     FALSE 0.002 300.000 0.000 NA   NA
 7546551 7546552 GBP346_A0966 GBP346_A0967     FALSE 0.040 116.000 0.000 NA   NA
 7546552 7546553 GBP346_A0967 GBP346_A0968     FALSE 0.025 379.000 0.000 1.000 N NA
 7546553 7546554 GBP346_A0968 GBP346_A0969     TRUE 0.873 -3.000 0.444 1.000   NA
 7546554 7546555 GBP346_A0969 GBP346_A0970   trbB TRUE 0.869 -3.000 0.409 1.000   NA
 7546555 7546556 GBP346_A0970 GBP346_A0971 trbB   TRUE 0.912 -3.000 0.000 NA Y NA
 7546556 7546557 GBP346_A0971 GBP346_A0972     TRUE 0.912 -3.000 0.000 NA Y NA
 7546557 7546558 GBP346_A0972 GBP346_A0973     TRUE 0.953 11.000 0.333 NA Y NA
 7546558 7546559 GBP346_A0973 GBP346_A0974   trbJ TRUE 0.970 -3.000 0.667 NA Y NA
 7546559 7546560 GBP346_A0974 GBP346_A0975 trbJ trbL TRUE 0.824 49.000 0.000 NA Y NA
 7546560 7546561 GBP346_A0975 GBP346_A0976 trbL   TRUE 0.948 13.000 0.333 NA Y NA
 7546561 7546562 GBP346_A0976 GBP346_A0977   trbG TRUE 0.961 -3.000 0.333 NA Y NA
 7546562 7546563 GBP346_A0977 GBP346_A0978 trbG   TRUE 0.973 3.000 0.667 NA Y NA
 7546563 7546564 GBP346_A0978 GBP346_A0979     TRUE 0.671 -3.000 0.143 NA   NA
 7546566 7546567 GBP346_A0981 GBP346_A0982     FALSE 0.001 365.000 0.000 NA   NA
 7546567 7546568 GBP346_A0982 GBP346_A0983     TRUE 0.974 -3.000 0.000 0.001 Y NA
 7546568 7546569 GBP346_A0983 GBP346_A0984     FALSE 0.573 -3.000 0.000 1.000   NA
 7546569 7546570 GBP346_A0984 GBP346_A0985     FALSE 0.003 979.000 0.000 1.000   NA
 7546570 7546571 GBP346_A0985 GBP346_A0986     FALSE 0.052 53.000 0.000 NA   NA
 7546571 7546572 GBP346_A0986 GBP346_A0987     FALSE 0.054 30.000 0.000 NA   NA
 7546572 7546573 GBP346_A0987 GBP346_A0988     FALSE 0.001 355.000 0.000 NA   NA
 7546573 7546574 GBP346_A0988 GBP346_A0989     FALSE 0.031 130.000 0.000 NA   NA
 7546575 7546576 GBP346_A0990 GBP346_A0991     FALSE 0.328 155.000 0.000 1.000 N NA
 7546576 7546577 GBP346_A0991 GBP346_A0992     TRUE 0.660 24.000 0.000 0.052   NA
 7546578 7546579 GBP346_A0993 GBP346_A0994     FALSE 0.009 1045.000 0.000 0.055   NA
 7546579 7546580 GBP346_A0994 GBP346_A0995     FALSE 0.042 229.000 0.000 1.000   NA
 7546580 7546581 GBP346_A0995 GBP346_A0996     FALSE 0.378 53.000 0.000 1.000   NA
 7546581 7546582 GBP346_A0996 GBP346_A0997     FALSE 0.378 39.000 0.000 1.000   NA
 7546583 7546584 GBP346_A0998 GBP346_A0999     FALSE 0.307 159.000 0.341 NA   NA
 7546585 7546586 GBP346_A1000 GBP346_A1001     TRUE 0.603 25.000 0.273 NA   NA
 7546586 7546587 GBP346_A1001 GBP346_A1002     TRUE 0.667 -3.000 0.139 NA   NA
 7546587 7546588 GBP346_A1002 GBP346_A1003     TRUE 0.890 81.000 0.048 1.000 Y NA
 7546588 7546589 GBP346_A1003 GBP346_A1004     TRUE 0.944 23.000 0.636 0.001 N NA
 7546589 7546590 GBP346_A1004 GBP346_A1005   cobA_1 TRUE 0.845 54.000 0.411 1.000 N NA
 7546591 7546592 GBP346_A1006 GBP346_A1007 cbiX   FALSE 0.553 32.000 0.059 1.000   NA
 7546592 7546593 GBP346_A1007 GBP346_A1008     TRUE 0.943 4.000 0.631 0.058   NA
 7546594 7546595 GBP346_A1009 GBP346_A1010     TRUE 0.852 44.000 0.494 1.000 N NA
 7546595 7546596 GBP346_A1010 GBP346_A1011     FALSE 0.166 22.000 0.009 NA   NA
 7546597 7546598 GBP346_A1012 GBP346_A1013     FALSE 0.402 44.000 0.094 NA   NA
 7546598 7546599 GBP346_A1013 GBP346_A1014   ilvD FALSE 0.216 48.000 0.025 NA   NA
 7546600 7546601 GBP346_A1015 GBP346_A1016     FALSE 0.107 -3.000 0.000 NA   NA
 7546601 7546602 GBP346_A1016 GBP346_A1017   lgt FALSE 0.107 -3.000 0.000 NA   NA
 7546605 7546606 GBP346_A1020 GBP346_A1021     FALSE 0.048 76.000 0.000 NA   NA
 7546606 7546607 GBP346_A1021 GBP346_A1022     FALSE 0.047 83.000 0.000 NA   NA
 7546607 7546608 GBP346_A1022 GBP346_A1023     FALSE 0.381 -3.000 0.025 NA   NA
 7546611 7546612 GBP346_A1027 GBP346_A1028     TRUE 0.963 -3.000 0.130 1.000 Y NA
 7546612 7546613 GBP346_A1028 GBP346_A1029   cobT TRUE 0.898 44.000 0.042 1.000 Y NA
 7546613 7546614 GBP346_A1029 GBP346_A1030 cobT cobS TRUE 0.981 7.000 0.164 0.010 Y NA
 7546614 7546615 GBP346_A1030 GBP346_A1031 cobS cobC TRUE 0.772 -15.000 0.102 1.000 N NA
 7546615 7546616 GBP346_A1031 GBP346_A1033 cobC   FALSE 0.250 47.000 0.035 NA   NA
 7546617 7546618 GBP346_A1032 GBP346_A1034   btuF FALSE 0.060 166.000 0.025 NA   NA
 7546618 7546619 GBP346_A1034 GBP346_A1035 btuF   TRUE 0.900 6.000 0.180 1.000 N NA
 7546619 7546620 GBP346_A1035 GBP346_A1036   cobD TRUE 0.936 -7.000 0.463 0.010 N NA
 7546620 7546621 GBP346_A1036 GBP346_A1037 cobD   TRUE 0.948 -6.000 0.191 1.000 Y NA
 7546622 7546623 GBP346_A1038 GBP346_A1039 cobQ   FALSE 0.006 281.000 0.005 NA   NA
 7546623 7546624 GBP346_A1039 GBP346_A1040     FALSE 0.012 359.000 0.092 NA   NA
 7546625 7546626 GBP346_A1041 GBP346_A1042 panD panC TRUE 0.942 53.000 0.342 1.000 Y NA
 7546626 7546627 GBP346_A1042 GBP346_A1043 panC   FALSE 0.001 402.000 0.000 NA   NA
 7546627 7546628 GBP346_A1043 GBP346_A1044     FALSE 0.019 193.000 0.003 NA   NA
 7546628 7546629 GBP346_A1044 GBP346_A1045     FALSE 0.498 5.000 0.048 NA   NA
 7546630 7546631 GBP346_A1046 GBP346_A1047     TRUE 0.778 14.000 0.575 NA   NA
 7546631 7546632 GBP346_A1047 GBP346_A1048     FALSE 0.002 296.000 0.000 NA   NA
 7546632 7546633 GBP346_A1048 GBP346_A1050     TRUE 0.818 -3.000 0.500 NA   NA
 7546634 7546635 GBP346_A1049 GBP346_A1051   metG FALSE 0.003 247.000 0.000 NA   NA
 7546635 7546636 GBP346_A1051 GBP346_A1052 metG   FALSE 0.016 482.000 0.000 1.000 N NA
 7546637 7546638 GBP346_A1053 GBP346_A1054   sodC FALSE 0.521 133.000 0.021 1.000 N NA
 7546638 7546639 GBP346_A1054 GBP346_A1055 sodC dcd TRUE 0.637 104.000 0.017 1.000 N NA
 7546639 7546640 GBP346_A1055 GBP346_A1056 dcd   TRUE 0.726 103.000 0.105 1.000 N NA
 7546640 7546641 GBP346_A1056 GBP346_A1057     TRUE 0.696 3.000 0.141 NA   NA
 7546642 7546643 GBP346_A1058 GBP346_A1059   argH_1 FALSE 0.448 33.000 0.009 1.000   NA
 7546643 7546644 GBP346_A1059 GBP346_A1060 argH_1   FALSE 0.288 169.000 0.002 1.000 N NA
 7546644 7546645 GBP346_A1060 GBP346_A1061     FALSE 0.027 782.000 0.000 NA Y NA
 7546645 7546646 GBP346_A1061 GBP346_A1062     TRUE 0.774 8.000 0.333 NA   NA
 7546648 7546649 GBP346_A1063 GBP346_A1065     FALSE 0.501 -3.000 0.056 NA   NA
 7546652 7546653 GBP346_A1068 GBP346_A1069   hemC FALSE 0.143 35.000 0.006 NA   NA
 7546653 7546654 GBP346_A1069 GBP346_A1070 hemC   TRUE 0.979 0.000 0.023 0.002 Y NA
 7546654 7546655 GBP346_A1070 GBP346_A1072     TRUE 0.981 5.000 0.765 1.000 Y NA
 7546656 7546657 GBP346_A1071 GBP346_A1073     FALSE 0.389 33.000 0.083 NA   NA
 7546657 7546658 GBP346_A1073 GBP346_A1074     TRUE 0.808 39.000 0.588 NA N NA
 7546658 7546659 GBP346_A1074 GBP346_A1075     TRUE 0.905 87.000 0.529 0.062 N NA
 7546662 7546663 GBP346_A1078 GBP346_A1079     TRUE 0.695 71.000 0.667 NA   NA
 7546665 7546666 GBP346_A1081 GBP346_A1082 nadE_1   TRUE 0.826 61.000 0.288 1.000 N NA
 7546669 7546670 GBP346_A1084 GBP346_A1086     TRUE 0.948 35.000 0.467 1.000 Y NA
 7546670 7546671 GBP346_A1086 GBP346_A1087     TRUE 0.986 -3.000 0.467 0.012 Y NA
 7546671 7546672 GBP346_A1087 GBP346_A1088     FALSE 0.531 211.000 0.000 0.066 Y NA
 7546672 7546673 GBP346_A1088 GBP346_A1089     FALSE 0.506 -39.000 0.200 NA   NA
 7546676 7546677 GBP346_A1092 GBP346_A1093   ompR FALSE 0.548 68.000 0.222 NA   NA
 7546677 7546678 GBP346_A1093 GBP346_A1094 ompR   TRUE 0.938 -16.000 0.227 1.000 Y NA
 7546679 7546680 GBP346_A1095 GBP346_A1096     FALSE 0.476 127.000 0.267 NA   NA
 7546681 7546682 GBP346_A1097 GBP346_A1098     TRUE 0.958 54.000 0.846 1.000 Y NA
 7546683 7546684 GBP346_A1099 GBP346_A1100     FALSE 0.597 57.000 0.286 NA   NA
 7546684 7546685 GBP346_A1100 GBP346_A1101     TRUE 0.838 -3.000 0.647 NA   NA
 7546685 7546686 GBP346_A1101 GBP346_A1102     FALSE 0.001 364.000 0.000 NA   NA
 7546687 7546688 GBP346_A1103 GBP346_A1104 otsA_1   TRUE 0.644 -7.000 0.255 NA   NA
 7546689 7546690 GBP346_A1105 GBP346_A1106     FALSE 0.000 770.000 0.000 NA   NA
 7546690 7546691 GBP346_A1106 GBP346_A1107     FALSE 0.436 124.000 0.196 NA   NA
 7546691 7546692 GBP346_A1107 GBP346_A1108     FALSE 0.000 574.000 0.000 NA   NA
 7546693 7546694 GBP346_A1109 GBP346_A1110     TRUE 0.748 0.000 0.200 NA   NA
 7546694 7546695 GBP346_A1110 GBP346_A1112     FALSE 0.003 258.000 0.000 NA   NA
 7546696 7546697 GBP346_A1111 GBP346_A1113     TRUE 0.617 -31.000 0.364 NA   NA
 7546699 7546700 GBP346_A1115 GBP346_A1116     FALSE 0.020 273.000 0.065 NA   NA
 7546700 7546701 GBP346_A1116 GBP346_A1117     TRUE 0.702 17.000 0.385 NA   NA
 7546702 7546703 GBP346_A1118 GBP346_A1119     FALSE 0.419 13.000 0.053 NA   NA
 7546705 7546706 GBP346_A1121 GBP346_A1122     TRUE 0.848 6.000 0.667 NA   NA
 7546706 7546707 GBP346_A1122 GBP346_A1123     TRUE 0.671 102.000 0.667 NA   NA
 7546707 7546708 GBP346_A1123 GBP346_A1124     FALSE 0.001 313.000 0.000 NA   NA
 7546708 7546709 GBP346_A1124 GBP346_A1125     TRUE 0.718 18.000 0.500 NA   NA
 7546709 7546710 GBP346_A1125 GBP346_A1126     FALSE 0.371 161.000 0.600 NA   NA
 7546710 7546711 GBP346_A1126 GBP346_A1127     FALSE 0.000 952.000 0.000 NA   NA
 7546713 7546714 GBP346_A1129 GBP346_A1130     FALSE 0.044 102.000 0.000 NA   NA
 7546714 7546715 GBP346_A1130 GBP346_A1131     FALSE 0.054 30.000 0.000 NA   NA
 7546716 7546717 GBP346_A1132 GBP346_A1133     TRUE 0.865 -3.000 1.000 NA   NA
 7546717 7546718 GBP346_A1133 GBP346_A1134     FALSE 0.002 303.000 0.000 NA   NA
 7546719 7546720 GBP346_A1135 GBP346_A1136     FALSE 0.051 -25.000 0.000 NA   NA
 7546721 7546722 GBP346_A1137 GBP346_A1138     FALSE 0.000 614.000 0.000 NA   NA
 7546723 7546724 GBP346_A1139 GBP346_A1140     FALSE 0.002 284.000 0.000 NA   NA
 7546724 7546725 GBP346_A1140 GBP346_A1141     FALSE 0.005 212.000 0.000 NA   NA
 7546725 7546726 GBP346_A1141 GBP346_A1142     TRUE 0.818 -3.000 0.500 NA   NA
 7546726 7546727 GBP346_A1142 GBP346_A1143     FALSE 0.001 356.000 0.000 NA   NA
 7546727 7546728 GBP346_A1143 GBP346_A1144     FALSE 0.067 -7.000 0.000 NA   NA
 7546728 7546729 GBP346_A1144 GBP346_A1145     TRUE 0.679 -7.000 0.333 NA   NA
 7546729 7546730 GBP346_A1145 GBP346_A1146     TRUE 0.793 -7.000 1.000 NA   NA
 7546730 7546731 GBP346_A1146 GBP346_A1147     TRUE 0.822 10.000 0.667 NA   NA
 7546731 7546732 GBP346_A1147 GBP346_A1148     TRUE 0.653 76.000 0.500 NA   NA
 7546732 7546733 GBP346_A1148 GBP346_A1149     FALSE 0.054 28.000 0.000 NA   NA
 7546736 7546737 GBP346_A1152 GBP346_A1153     FALSE 0.048 89.000 0.000 NA   NA
 7546737 7546738 GBP346_A1153 GBP346_A1154     FALSE 0.001 360.000 0.000 NA   NA
 7546739 7546740 GBP346_A1155 GBP346_A1156     FALSE 0.005 215.000 0.000 NA   NA
 7546740 7546741 GBP346_A1156 GBP346_A1157     TRUE 0.840 11.000 1.000 NA   NA
 7546741 7546742 GBP346_A1157 GBP346_A1158     TRUE 0.840 0.000 0.500 NA   NA
 7546745 7546746 GBP346_A1161 GBP346_A1162     FALSE 0.571 21.000 0.211 NA   NA
 7546746 7546747 GBP346_A1162 GBP346_A1163     FALSE 0.001 461.000 0.000 NA   NA
 7546748 7546749 GBP346_A1164 GBP346_A1165     FALSE 0.127 132.000 0.024 NA   NA
 7546749 7546750 GBP346_A1165 GBP346_A1166   parE FALSE 0.172 206.000 0.007 0.093   NA
 7546750 7546751 GBP346_A1166 GBP346_A1167 parE parC TRUE 0.960 59.000 0.106 0.002 Y NA
 7546756 7546757 GBP346_A1172 GBP346_A1173     FALSE 0.053 33.000 0.000 NA   NA
 7546758 7546759 GBP346_A1174 GBP346_A1175     TRUE 0.903 2.000 0.600 1.000   NA
 7546759 7546760 GBP346_A1175 GBP346_A1176     FALSE 0.032 276.000 0.000 NA N NA
 7546760 7546761 GBP346_A1176 GBP346_A1177     FALSE 0.107 -3.000 0.000 NA   NA
 7546762 7546763 GBP346_A1178 GBP346_A1179     TRUE 0.739 132.000 0.394 1.000 N NA
 7546763 7546764 GBP346_A1179 GBP346_A1180     FALSE 0.026 262.000 0.000 1.000   NA
 7546764 7546765 GBP346_A1180 GBP346_A1181     TRUE 0.671 5.000 0.125 NA   NA
 7546765 7546766 GBP346_A1181 GBP346_A1182     TRUE 0.724 65.000 0.216 NA N NA
 7546766 7546767 GBP346_A1182 GBP346_A1183     TRUE 0.654 61.000 0.155 1.000   NA
 7546767 7546768 GBP346_A1183 GBP346_A1184     FALSE 0.438 101.000 0.141 NA   NA
 7546769 7546770 GBP346_A1185 GBP346_A1186     FALSE 0.509 136.000 0.028 1.000 N NA
 7546770 7546771 GBP346_A1186 GBP346_A1187     TRUE 0.747 0.000 0.020 NA N NA
 7546771 7546772 GBP346_A1187 GBP346_A1188     TRUE 0.781 0.000 0.047 NA N NA
 7546772 7546773 GBP346_A1188 GBP346_A1189     FALSE 0.311 -3.000 0.012 NA   NA
 7546773 7546774 GBP346_A1189 GBP346_A1190     FALSE 0.300 93.000 0.058 NA   NA
 7546774 7546775 GBP346_A1190 GBP346_A1191     FALSE 0.096 193.000 0.115 NA   NA
 7546775 7546776 GBP346_A1191 GBP346_A1192     TRUE 0.849 -3.000 0.750 NA   NA
 7546777 7546778 GBP346_A1193 GBP346_A1194   tal FALSE 0.001 366.000 0.000 NA   NA
 7546778 7546779 GBP346_A1194 GBP346_A1195 tal   FALSE 0.142 111.000 0.012 NA   NA
 7546779 7546780 GBP346_A1195 GBP346_A1196     FALSE 0.362 40.000 0.074 NA   NA
 7546780 7546781 GBP346_A1196 GBP346_A1197     FALSE 0.322 84.000 0.067 NA   NA
 7546781 7546782 GBP346_A1197 GBP346_A1198     FALSE 0.145 213.000 0.431 NA   NA
 7546783 7546784 GBP346_A1199 GBP346_A1200     TRUE 0.974 41.000 0.688 0.012 Y NA
 7546787 7546788 GBP346_A1203 GBP346_A1204 nth   TRUE 0.856 5.000 0.048 1.000 N NA
 7546792 7546793 GBP346_A1208 GBP346_A1209     FALSE 0.396 42.000 0.091 NA   NA
 7546794 7546795 GBP346_A1210 GBP346_A1211     TRUE 0.610 -3.000 0.100 NA   NA
 7546796 7546797 GBP346_A1212 GBP346_A1213     FALSE 0.279 172.000 0.114 NA N NA
 7546798 7546799 GBP346_A1214 GBP346_A1215   purT FALSE 0.002 292.000 0.000 NA   NA
 7546799 7546800 GBP346_A1215 GBP346_A1216 purT   FALSE 0.103 170.000 0.070 NA   NA
 7546800 7546801 GBP346_A1216 GBP346_A1217     TRUE 0.703 59.000 0.647 NA   NA
 7546801 7546802 GBP346_A1217 GBP346_A1218     FALSE 0.599 20.000 0.235 NA   NA
 7546802 7546803 GBP346_A1218 GBP346_A1219     TRUE 0.647 84.000 0.500 NA   NA
 7546803 7546804 GBP346_A1219 GBP346_A1220     FALSE 0.346 14.000 0.034 NA   NA
 7546805 7546806 GBP346_A1221 GBP346_A1222     FALSE 0.055 24.000 0.000 NA   NA
 7546806 7546807 GBP346_A1222 GBP346_A1223     FALSE 0.504 44.000 0.039 1.000   NA
 7546808 7546809 GBP346_A1224 GBP346_A1225   dnaE FALSE 0.025 177.000 0.002 NA   NA
 7546809 7546810 GBP346_A1225 GBP346_A1226 dnaE msbA TRUE 0.662 40.000 0.008 1.000 N NA
 7546810 7546811 GBP346_A1226 GBP346_A1227 msbA   TRUE 0.701 54.000 0.039 1.000 N NA
 7546811 7546812 GBP346_A1227 GBP346_A1228     FALSE 0.121 348.000 0.000 1.000 Y NA
 7546812 7546813 GBP346_A1228 GBP346_A1229     TRUE 0.748 -3.000 0.250 NA   NA
 7546813 7546814 GBP346_A1229 GBP346_A1230     TRUE 0.795 -3.000 0.391 NA   NA
 7546814 7546815 GBP346_A1230 GBP346_A1231     TRUE 0.906 87.000 0.092 1.000 Y NA
 7546818 7546819 GBP346_A1234 GBP346_A1235     FALSE 0.023 304.000 0.125 NA   NA
 7546819 7546820 GBP346_A1235 GBP346_A1236     TRUE 0.855 -3.000 0.812 NA   NA
 7546820 7546821 GBP346_A1236 GBP346_A1237     FALSE 0.001 354.000 0.000 NA   NA
 7546821 7546822 GBP346_A1237 GBP346_A1238     FALSE 0.003 254.000 0.000 NA   NA
 7546822 7546823 GBP346_A1238 GBP346_A1239     FALSE 0.005 496.000 0.074 NA   NA
 7546823 7546824 GBP346_A1239 GBP346_A1240     FALSE 0.118 178.000 0.111 NA   NA
 7546826 7546827 GBP346_A1241 GBP346_A1243     FALSE 0.001 323.000 0.000 NA   NA
 7546828 7546829 GBP346_A1244 GBP346_A1245     FALSE 0.530 30.000 0.182 NA   NA
 7546829 7546830 GBP346_A1245 GBP346_A1246     FALSE 0.000 692.000 0.000 NA   NA
 7546830 7546831 GBP346_A1246 GBP346_A1247     TRUE 0.634 74.000 0.438 NA   NA
 7546834 7546835 GBP346_A1250 GBP346_A1251   maf_1 TRUE 0.878 9.000 0.417 NA N NA
 7546835 7546836 GBP346_A1251 GBP346_A1252 maf_1   FALSE 0.360 53.000 0.074 NA   NA
 7546836 7546837 GBP346_A1252 GBP346_A1253     TRUE 0.606 57.000 0.307 NA   NA
 7546837 7546838 GBP346_A1253 GBP346_A1254   nadD FALSE 0.480 5.000 0.044 NA   NA
 7546838 7546839 GBP346_A1254 GBP346_A1255 nadD hemF TRUE 0.955 -3.000 0.066 1.000 Y NA
 7546839 7546840 GBP346_A1255 GBP346_A1256 hemF purD FALSE 0.571 131.000 0.043 1.000 N NA
 7546840 7546841 GBP346_A1256 GBP346_A1257 purD   FALSE 0.209 111.000 0.034 NA   NA
 7546841 7546842 GBP346_A1257 GBP346_A1258     FALSE 0.125 40.000 0.002 NA   NA
 7546842 7546843 GBP346_A1258 GBP346_A1259   upp FALSE 0.125 39.000 0.002 NA   NA
 7546844 7546845 GBP346_A1260 GBP346_A1261   mgsA FALSE 0.130 239.000 0.046 1.000 N NA
 7546845 7546846 GBP346_A1261 GBP346_A1262 mgsA   FALSE 0.012 895.000 0.032 1.000 N NA
 7546846 7546847 GBP346_A1262 GBP346_A1263     FALSE 0.371 6.000 0.021 NA   NA
 7546847 7546848 GBP346_A1263 GBP346_A1264   kdpF FALSE 0.127 130.000 0.020 NA   NA
 7546848 7546849 GBP346_A1264 GBP346_A1265 kdpF kdpA TRUE 0.930 -3.000 0.192 0.001   NA
 7546849 7546850 GBP346_A1265 GBP346_A1266 kdpA kdpB TRUE 0.982 -3.000 0.091 0.001 Y NA
 7546850 7546851 GBP346_A1266 GBP346_A1267 kdpB kdpC TRUE 0.988 13.000 0.877 0.001 Y NA
 7546851 7546852 GBP346_A1267 GBP346_A1268 kdpC   FALSE 0.277 8.000 0.009 NA   NA
 7546852 7546853 GBP346_A1268 GBP346_A1269     TRUE 0.797 -3.000 0.400 NA   NA
 7546853 7546854 GBP346_A1269 GBP346_A1270     TRUE 0.888 -13.000 0.000 1.000 Y NA
 7546856 7546857 GBP346_A1272 GBP346_A1273     FALSE 0.051 216.000 0.086 NA   NA
 7546857 7546858 GBP346_A1273 GBP346_A1274     FALSE 0.096 192.000 0.114 NA   NA
 7546858 7546859 GBP346_A1274 GBP346_A1275     FALSE 0.595 -3.000 0.091 NA   NA
 7546859 7546860 GBP346_A1275 GBP346_A1276     FALSE 0.341 -3.000 0.017 NA   NA
 7546860 7546861 GBP346_A1276 GBP346_A1277     FALSE 0.190 -19.000 0.016 NA   NA
 7546861 7546862 GBP346_A1277 GBP346_A1278     FALSE 0.178 22.000 0.012 NA   NA
 7546862 7546863 GBP346_A1278 GBP346_A1279     FALSE 0.247 -39.000 0.042 NA   NA
 7546863 7546864 GBP346_A1279 GBP346_A1280     FALSE 0.520 -3.000 0.061 NA   NA
 7546864 7546865 GBP346_A1280 GBP346_A1281     FALSE 0.012 344.000 0.000 1.000   NA
 7546865 7546866 GBP346_A1281 GBP346_A1282     FALSE 0.132 266.000 0.133 1.000 N NA
 7546866 7546867 GBP346_A1282 GBP346_A1283     FALSE 0.051 50.000 0.000 NA   NA
 7546868 7546869 GBP346_A1284 GBP346_A1286     FALSE 0.008 494.000 0.000 NA N NA
 7546869 7546870 GBP346_A1286 GBP346_A1287     FALSE 0.001 418.000 0.000 NA   NA
 7546870 7546871 GBP346_A1287 GBP346_A1288     TRUE 0.758 -3.000 0.273 NA   NA
 7546871 7546872 GBP346_A1288 GBP346_A1289     FALSE 0.366 195.000 0.246 1.000 N NA
 7546872 7546873 GBP346_A1289 GBP346_A1290     TRUE 0.967 9.000 0.256 1.000 Y NA
 7546873 7546874 GBP346_A1290 GBP346_A1291     FALSE 0.597 22.000 0.255 NA   NA
 7546874 7546875 GBP346_A1291 GBP346_A1292     FALSE 0.189 91.000 0.021 NA   NA
 7546875 7546876 GBP346_A1292 GBP346_A1293     TRUE 0.773 7.000 0.310 NA   NA
 7546876 7546877 GBP346_A1293 GBP346_A1294     FALSE 0.348 31.000 0.064 NA   NA
 7546877 7546878 GBP346_A1294 GBP346_A1295     FALSE 0.489 -3.000 0.052 NA   NA
 7546879 7546880 GBP346_A1296 GBP346_A1297   ilvB FALSE 0.094 128.000 0.006 NA   NA
 7546880 7546881 GBP346_A1297 GBP346_A1298 ilvB ilvN TRUE 0.968 112.000 0.371 0.001 Y NA
 7546881 7546882 GBP346_A1298 GBP346_A1299 ilvN ilvC_1 TRUE 0.956 83.000 0.092 0.001 Y NA
 7546882 7546883 GBP346_A1299 GBP346_A1300 ilvC_1   TRUE 0.634 122.000 0.046 1.000 N NA
 7546883 7546884 GBP346_A1300 GBP346_A1301     TRUE 0.960 17.000 0.466 1.000 Y NA
 7546884 7546885 GBP346_A1301 GBP346_A1302   leuA FALSE 0.046 360.000 0.073 1.000 N NA
 7546886 7546887 GBP346_A1303 GBP346_A1304     TRUE 0.952 57.000 0.571 1.000 Y NA
 7546887 7546888 GBP346_A1304 GBP346_A1305     FALSE 0.001 444.000 0.000 NA   NA
 7546889 7546890 GBP346_A1306 GBP346_A1307     FALSE 0.338 -48.000 0.083 NA   NA
 7546890 7546891 GBP346_A1307 GBP346_A1308   rpsO FALSE 0.489 106.000 0.020 NA N NA
 7546891 7546892 GBP346_A1308 GBP346_A1309 rpsO pnp FALSE 0.309 304.000 0.335 1.000 Y NA
 7546892 7546893 GBP346_A1309 GBP346_A1310 pnp   TRUE 0.642 114.000 0.034 1.000 N NA
 7546893 7546894 GBP346_A1310 GBP346_A1311   tpiA TRUE 0.756 60.000 0.099 1.000 N NA
 7546894 7546895 GBP346_A1311 GBP346_A1312 tpiA   TRUE 0.778 80.000 0.184 1.000 N NA
 7546895 7546896 GBP346_A1312 GBP346_A1313     FALSE 0.043 108.000 0.000 NA   NA
 7546896 7546897 GBP346_A1313 GBP346_A1314     FALSE 0.015 155.000 0.000 NA   NA
 7546897 7546898 GBP346_A1314 GBP346_A1315     TRUE 0.971 81.000 0.507 0.003 Y NA
 7546898 7546899 GBP346_A1315 GBP346_A1316     TRUE 0.973 21.000 0.328 0.003 Y NA
 7546899 7546900 GBP346_A1316 GBP346_A1317   nuoD TRUE 0.983 12.000 0.483 0.006 Y NA
 7546900 7546901 GBP346_A1317 GBP346_A1318 nuoD   TRUE 0.872 169.000 0.355 0.006 Y NA
 7546901 7546902 GBP346_A1318 GBP346_A1319   nuoF TRUE 0.986 -3.000 0.343 0.006 Y NA
 7546902 7546903 GBP346_A1319 GBP346_A1320 nuoF nuoG TRUE 0.967 83.000 0.395 0.006 Y NA
 7546903 7546904 GBP346_A1320 GBP346_A1321 nuoG   TRUE 0.989 1.000 0.515 0.006 Y NA
 7546904 7546905 GBP346_A1321 GBP346_A1322     TRUE 0.981 16.000 0.500 0.006 Y NA
 7546905 7546906 GBP346_A1322 GBP346_A1323     TRUE 0.965 110.000 0.442 0.006 Y NA
 7546906 7546907 GBP346_A1323 GBP346_A1324     TRUE 0.977 19.000 0.484 0.003 Y NA
 7546907 7546908 GBP346_A1324 GBP346_A1325     TRUE 0.977 18.000 0.451 0.006 Y NA
 7546908 7546909 GBP346_A1325 GBP346_A1326   nuoM TRUE 0.973 16.000 0.175 0.006 Y NA
 7546909 7546910 GBP346_A1326 GBP346_A1327 nuoM nuoN_1 TRUE 0.971 25.000 0.340 0.006 Y NA
 7546910 7546911 GBP346_A1327 GBP346_A1328 nuoN_1   TRUE 0.752 0.000 0.202 NA   NA
 7546911 7546912 GBP346_A1328 GBP346_A1329     FALSE 0.320 37.000 0.058 NA   NA
 7546912 7546913 GBP346_A1329 GBP346_A1330     FALSE 0.107 152.000 0.046 NA   NA
 7546913 7546914 GBP346_A1330 GBP346_A1331     FALSE 0.496 61.000 0.155 NA   NA
 7546914 7546915 GBP346_A1331 GBP346_A1332     TRUE 0.978 12.000 0.174 0.004 Y NA
 7546915 7546916 GBP346_A1332 GBP346_A1333     TRUE 0.905 41.000 0.060 1.000 Y NA
 7546916 7546917 GBP346_A1333 GBP346_A1334     TRUE 0.982 -3.000 0.224 0.033 Y NA
 7546917 7546918 GBP346_A1334 GBP346_A1335     TRUE 0.619 93.000 0.400 NA   NA
 7546918 7546919 GBP346_A1335 GBP346_A1336     TRUE 0.769 -3.000 0.300 NA   NA
 7546920 7546921 GBP346_A1337 GBP346_A1338     TRUE 0.699 44.000 0.643 NA   NA
 7546921 7546922 GBP346_A1338 GBP346_A1339     TRUE 0.682 28.000 0.500 NA   NA
 7546922 7546923 GBP346_A1339 GBP346_A1340     TRUE 0.922 10.000 0.531 1.000 N NA
 7546924 7546925 GBP346_A1341 GBP346_A1342     FALSE 0.343 82.000 0.075 NA   NA
 7546926 7546927 GBP346_A1343 GBP346_A1344     TRUE 0.668 46.000 0.500 NA   NA
 7546928 7546929 GBP346_A1345 GBP346_A1346     FALSE 0.300 59.000 0.050 NA   NA
 7546930 7546931 GBP346_A1347 GBP346_A1348     FALSE 0.203 160.000 0.152 NA   NA
 7546931 7546932 GBP346_A1348 GBP346_A1349     FALSE 0.495 67.000 0.163 NA   NA
 7546932 7546933 GBP346_A1349 GBP346_A1350     FALSE 0.425 -49.000 0.139 NA   NA
 7546934 7546935 GBP346_A1352 GBP346_A1353   rrs_1 FALSE 0.051 65.000 0.000 NA   NA
 7546935 7546936 GBP346_A1353 GBP346_A1354 rrs_1   FALSE 0.047 83.000 0.000 NA   NA
 7546936 7546937 GBP346_A1354 GBP346_A1355     FALSE 0.053 34.000 0.000 NA   NA
 7546937 7546938 GBP346_A1355 GBP346_A4280   rrl_1 FALSE 0.001 392.000 0.000 NA   NA
 7546938 7546939 GBP346_A4280 GBP346_A1356 rrl_1 rrf_1 FALSE 0.008 184.000 0.000 NA   NA
 7546939 7546940 GBP346_A1356 GBP346_A1357 rrf_1   FALSE 0.000 757.000 0.000 NA   NA
 7546942 7546943 GBP346_A1359 GBP346_A1360     FALSE 0.038 320.000 0.000 1.000 N NA
 7546943 7546944 GBP346_A1360 GBP346_A1361     FALSE 0.149 20.000 0.004 NA   NA
 7546944 7546945 GBP346_A1361 GBP346_A1362     TRUE 0.652 34.000 0.429 NA   NA
 7546945 7546946 GBP346_A1362 GBP346_A1363     FALSE 0.013 164.000 0.000 NA   NA
 7546947 7546948 GBP346_A1364 GBP346_A1365     FALSE 0.567 -3.000 0.078 NA   NA
 7546948 7546949 GBP346_A1365 GBP346_A1366     TRUE 0.718 98.000 1.000 NA   NA
 7546950 7546951 GBP346_A1367 GBP346_A1368     FALSE 0.541 68.000 0.214 NA   NA
 7546951 7546952 GBP346_A1368 GBP346_A1369     FALSE 0.043 224.000 0.000 1.000   NA
 7546952 7546953 GBP346_A1369 GBP346_A1370     TRUE 0.629 40.000 0.364 NA   NA
 7546953 7546954 GBP346_A1370 GBP346_A1371     FALSE 0.002 276.000 0.000 NA   NA
 7546954 7546955 GBP346_A1371 GBP346_A1372     TRUE 0.989 0.000 0.500 0.012 Y NA
 7546955 7546956 GBP346_A1372 GBP346_A1373     TRUE 0.796 8.000 0.429 NA   NA
 7546956 7546957 GBP346_A1373 GBP346_A1374     TRUE 0.693 28.000 0.545 NA   NA
 7546957 7546958 GBP346_A1374 GBP346_A1375     TRUE 0.951 8.000 0.714 0.003   NA
 7546958 7546959 GBP346_A1375 GBP346_A1376     TRUE 0.989 -3.000 0.933 0.012 Y NA
 7546959 7546960 GBP346_A1376 GBP346_A1377     FALSE 0.532 49.000 0.200 NA   NA
 7546961 7546962 GBP346_A1378 GBP346_A1379     TRUE 0.902 35.000 0.188 NA Y NA
 7546963 7546964 GBP346_A1380 GBP346_A1381     FALSE 0.170 106.000 0.019 NA   NA
 7546967 7546968 GBP346_A1384 GBP346_A1385     TRUE 0.792 -3.000 0.375 NA   NA
 7546968 7546969 GBP346_A1385 GBP346_A1386     TRUE 0.972 1.000 0.538 NA Y NA
 7546969 7546970 GBP346_A1386 GBP346_A1387     TRUE 0.885 14.000 0.800 NA N NA
 7546973 7546974 GBP346_A1390 GBP346_A1391     TRUE 0.825 6.000 0.500 NA   NA
 7546975 7546976 GBP346_A1392 GBP346_A1393     FALSE 0.238 -39.000 0.038 NA   NA
 7546977 7546978 GBP346_A1394 GBP346_A1395     FALSE 0.489 90.000 0.171 NA   NA
 7546978 7546979 GBP346_A1395 GBP346_A1396     FALSE 0.581 -3.000 0.086 NA   NA
 7546979 7546980 GBP346_A1396 GBP346_A1397     FALSE 0.142 136.000 0.039 NA   NA
 7546983 7546984 GBP346_A1400 GBP346_A1401     TRUE 0.794 11.000 0.021 1.000 N NA
 7546984 7546985 GBP346_A1401 GBP346_A1402     TRUE 0.945 -10.000 0.026 0.051 Y NA
 7546986 7546987 GBP346_A1403 GBP346_A1404     TRUE 0.717 -3.000 0.200 NA   NA
 7546988 7546989 GBP346_A1405 GBP346_A1406     TRUE 0.780 -3.000 0.333 NA   NA
 7546989 7546990 GBP346_A1406 GBP346_A1407     TRUE 0.792 -3.000 0.375 NA   NA
 7546990 7546991 GBP346_A1407 GBP346_A1408     FALSE 0.002 301.000 0.000 NA   NA
 7546992 7546993 GBP346_A1409 GBP346_A1410 recC recB TRUE 0.990 -3.000 0.542 0.001 Y NA
 7546993 7546994 GBP346_A1410 GBP346_A1411 recB   TRUE 0.957 -3.000 0.688 0.001   NA
 7546994 7546995 GBP346_A1411 GBP346_A1412     TRUE 0.670 -3.000 0.025 1.000   NA
 7546996 7546997 GBP346_A1413 GBP346_A1414     FALSE 0.001 469.000 0.000 NA   NA
 7546997 7546998 GBP346_A1414 GBP346_A1415     FALSE 0.043 108.000 0.000 NA   NA
 7547000 7547001 GBP346_A1417 GBP346_A1418     FALSE 0.003 252.000 0.000 NA   NA
 7547001 7547002 GBP346_A1418 GBP346_A1419   thiC FALSE 0.004 224.000 0.000 NA   NA
 7547002 7547003 GBP346_A1419 GBP346_A1421 thiC   FALSE 0.022 184.000 0.003 NA   NA
 7547004 7547005 GBP346_A1422 GBP346_A1423     FALSE 0.052 39.000 0.000 NA   NA
 7547005 7547006 GBP346_A1423 GBP346_A1424     FALSE 0.107 -3.000 0.000 NA   NA
 7547006 7547007 GBP346_A1424 GBP346_A1425     TRUE 0.726 16.000 0.000 0.050   NA
 7547007 7547008 GBP346_A1425 GBP346_A1426     FALSE 0.001 316.000 0.000 NA   NA
 7547008 7547009 GBP346_A1426 GBP346_A1427     TRUE 0.647 4.000 0.106 NA   NA
 7547011 7547012 GBP346_A1429 GBP346_A1430     FALSE 0.227 155.000 0.167 NA   NA
 7547012 7547013 GBP346_A1430 GBP346_A1431     FALSE 0.407 150.000 0.529 NA   NA
 7547014 7547015 GBP346_A1432 GBP346_A1433     FALSE 0.202 216.000 0.382 1.000   NA
 7547015 7547016 GBP346_A1433 GBP346_A1434     FALSE 0.236 -69.000 0.044 NA   NA
 7547016 7547017 GBP346_A1434 GBP346_A1435     FALSE 0.556 0.000 0.060 NA   NA
 7547018 7547019 GBP346_A1436 GBP346_A1437     FALSE 0.247 176.000 0.400 NA   NA
 7547020 7547021 GBP346_A1438 GBP346_A1439     TRUE 0.920 95.000 0.870 0.051 N NA
 7547021 7547022 GBP346_A1439 GBP346_A1440     TRUE 0.878 57.000 0.761 1.000 N NA
 7547022 7547023 GBP346_A1440 GBP346_A1441     FALSE 0.004 646.000 0.000 1.000   NA
 7547023 7547024 GBP346_A1441 GBP346_A1442     FALSE 0.565 68.000 0.250 NA   NA
 7547024 7547025 GBP346_A1442 GBP346_A1443     FALSE 0.122 2.000 0.000 NA   NA
 7547025 7547026 GBP346_A1443 GBP346_A1444     FALSE 0.001 384.000 0.000 NA   NA
 7547031 7547032 GBP346_A1449 GBP346_A1450     TRUE 0.610 53.000 0.320 NA   NA
 7547033 7547034 GBP346_A1451 GBP346_A1452     FALSE 0.263 34.000 0.038 NA   NA
 7547037 7547038 GBP346_A1455 GBP346_A1456   glmS_2 FALSE 0.378 -123.000 0.111 NA   NA
 7547039 7547040 GBP346_A1457 GBP346_A1458     TRUE 0.758 22.000 1.000 NA   NA
 7547040 7547041 GBP346_A1458 GBP346_A1459     FALSE 0.123 0.000 0.000 NA   NA
 7547041 7547042 GBP346_A1459 GBP346_A1460     FALSE 0.047 -36.000 0.000 NA   NA
 7547044 7547045 GBP346_A1462 GBP346_A1463     FALSE 0.117 5.000 0.000 NA   NA
 7547045 7547046 GBP346_A1463 GBP346_A1464     FALSE 0.363 28.000 0.069 NA   NA
 7547046 7547047 GBP346_A1464 GBP346_A1465     TRUE 0.831 -3.000 0.586 NA   NA
 7547047 7547048 GBP346_A1465 GBP346_A1466     FALSE 0.071 -6.000 0.000 NA   NA
 7547050 7547051 GBP346_A1468 GBP346_A1469     FALSE 0.373 118.000 0.115 NA   NA
 7547051 7547052 GBP346_A1469 GBP346_A1470     FALSE 0.052 38.000 0.000 NA   NA
 7547052 7547053 GBP346_A1470 GBP346_A1471     TRUE 0.818 -3.000 0.500 NA   NA
 7547053 7547054 GBP346_A1471 GBP346_A1472     TRUE 0.935 32.000 0.583 NA Y NA
 7547054 7547055 GBP346_A1472 GBP346_A1473     FALSE 0.284 164.000 0.333 NA   NA
 7547056 7547057 GBP346_A1474 GBP346_A1475     FALSE 0.052 35.000 0.000 NA   NA
 7547057 7547058 GBP346_A1475 GBP346_A1476     FALSE 0.046 -40.000 0.000 NA   NA
 7547060 7547061 GBP346_A1478 GBP346_A1479     TRUE 0.656 95.000 0.021 1.000 N NA
 7547062 7547063 GBP346_A1480 GBP346_A1481     FALSE 0.071 187.000 0.066 NA   NA
 7547064 7547065 GBP346_A1482 GBP346_A1483 madL madM TRUE 0.818 14.000 0.945 NA   NA
 7547065 7547066 GBP346_A1483 GBP346_A1484 madM   FALSE 0.275 21.000 0.036 NA   NA
 7547066 7547067 GBP346_A1484 GBP346_A1485   mdcA TRUE 0.740 -3.000 0.231 NA   NA
 7547067 7547068 GBP346_A1485 GBP346_A1486 mdcA mdcC TRUE 0.710 14.000 0.316 NA   NA
 7547068 7547069 GBP346_A1486 GBP346_A1487 mdcC mdcD TRUE 0.804 -3.000 0.438 NA   NA
 7547069 7547070 GBP346_A1487 GBP346_A1488 mdcD mdcE TRUE 0.734 -13.000 0.700 NA   NA
 7547070 7547071 GBP346_A1488 GBP346_A1489 mdcE mdcG FALSE 0.381 -25.000 0.085 NA   NA
 7547071 7547072 GBP346_A1489 GBP346_A1490 mdcG   TRUE 0.736 -3.000 0.068 1.000   NA
 7547072 7547073 GBP346_A1490 GBP346_A1491   mdcH TRUE 0.900 -3.000 0.203 1.000 N NA
 7547073 7547074 GBP346_A1491 GBP346_A1492 mdcH   FALSE 0.357 34.000 0.070 NA   NA
 7547074 7547075 GBP346_A1492 GBP346_A1493     FALSE 0.000 520.000 0.000 NA   NA
 7547075 7547076 GBP346_A1493 GBP346_A1494     FALSE 0.006 420.000 0.061 NA   NA
 7547076 7547077 GBP346_A1494 GBP346_A1496     FALSE 0.001 317.000 0.000 NA   NA
 7547079 7547080 GBP346_A1497 GBP346_A1498     FALSE 0.047 78.000 0.000 NA   NA
 7547081 7547082 GBP346_A1499 GBP346_A1500 dnaQ rnhA TRUE 0.945 19.000 0.248 1.000 Y NA
 7547082 7547083 GBP346_A1500 GBP346_A1501 rnhA   TRUE 0.777 -3.000 0.111 1.000   NA
 7547084 7547085 GBP346_A1502 GBP346_A1503 gloB   FALSE 0.295 177.000 0.233 1.000   NA
 7547085 7547086 GBP346_A1503 GBP346_A1504     FALSE 0.204 135.000 0.067 NA   NA
 7547088 7547089 GBP346_A1506 GBP346_A1507     FALSE 0.051 48.000 0.000 NA   NA
 7547091 7547092 GBP346_A1509 GBP346_A1510 carA   TRUE 0.897 32.000 0.026 1.000 Y NA
 7547092 7547093 GBP346_A1510 GBP346_A1511   carB TRUE 0.895 52.000 0.030 1.000 Y NA
 7547093 7547094 GBP346_A1511 GBP346_A1512 carB   TRUE 0.767 119.000 0.241 1.000 N NA
 7547094 7547095 GBP346_A1512 GBP346_A1513     TRUE 0.626 0.000 0.089 NA   NA
 7547096 7547097 GBP346_A1514 GBP346_A1515     FALSE 0.061 19.000 0.000 NA   NA
 7547098 7547099 GBP346_A1516 GBP346_A1517 rrmJ   FALSE 0.287 168.000 0.095 NA N NA
 7547099 7547100 GBP346_A1517 GBP346_A1518   folP TRUE 0.796 113.000 0.325 1.000 N NA
 7547100 7547101 GBP346_A1518 GBP346_A1519 folP glmM TRUE 0.827 26.000 0.260 1.000 N NA
 7547101 7547102 GBP346_A1519 GBP346_A1520 glmM pstS FALSE 0.019 436.000 0.000 1.000 N NA
 7547102 7547103 GBP346_A1520 GBP346_A1521 pstS pstC TRUE 0.848 155.000 0.039 0.002 Y NA
 7547103 7547104 GBP346_A1521 GBP346_A1522 pstC pstA TRUE 0.989 -3.000 0.537 0.002 Y NA
 7547104 7547105 GBP346_A1522 GBP346_A1523 pstA pstB TRUE 0.983 16.000 0.526 0.002 Y NA
 7547105 7547106 GBP346_A1523 GBP346_A1524 pstB phoU TRUE 0.926 20.000 0.317 NA Y NA
 7547106 7547107 GBP346_A1524 GBP346_A1525 phoU phoB TRUE 0.665 29.000 0.104 NA N NA
 7547107 7547108 GBP346_A1525 GBP346_A1526 phoB phoR TRUE 0.944 70.000 0.453 1.000 Y NA
 7547112 7547113 GBP346_A1530 GBP346_A1531     FALSE 0.504 122.000 0.273 NA   NA
 7547114 7547115 GBP346_A1532 GBP346_A1533     FALSE 0.596 107.000 0.400 NA   NA
 7547117 7547118 GBP346_A1535 GBP346_A1536     TRUE 0.818 -3.000 0.500 NA   NA
 7547118 7547119 GBP346_A1536 GBP346_A1537     FALSE 0.003 251.000 0.000 NA   NA
 7547120 7547121 GBP346_A1538 GBP346_A1539     FALSE 0.160 152.000 0.085 NA   NA
 7547122 7547123 GBP346_A1540 GBP346_A1541     FALSE 0.548 64.000 0.214 NA   NA
 7547125 7547126 GBP346_A1543 GBP346_A1544     FALSE 0.250 83.000 0.042 NA   NA
 7547126 7547127 GBP346_A1544 GBP346_A1545     FALSE 0.020 298.000 0.096 NA   NA
 7547128 7547129 GBP346_A1546 GBP346_A1547     TRUE 0.647 66.000 0.444 NA   NA
 7547130 7547131 GBP346_A1548 GBP346_A1549     FALSE 0.129 297.000 0.320 1.000 N NA
 7547132 7547133 GBP346_A1550 GBP346_A1551     FALSE 0.006 207.000 0.000 NA   NA
 7547133 7547134 GBP346_A1551 GBP346_A1552     FALSE 0.000 1374.000 0.000 NA   NA
 7547136 7547137 GBP346_A1554 GBP346_A1555     FALSE 0.247 86.000 0.040 NA   NA
 7547137 7547138 GBP346_A1555 GBP346_A1556     FALSE 0.000 1467.000 0.000 NA   NA
 7547138 7547139 GBP346_A1556 GBP346_A1557     FALSE 0.000 1527.000 0.000 NA   NA
 7547139 7547140 GBP346_A1557 GBP346_A1558     FALSE 0.002 261.000 0.000 NA   NA
 7547145 7547146 GBP346_A1562 GBP346_A1564     FALSE 0.393 159.000 0.000 0.005   NA
 7547148 7547149 GBP346_A1566 GBP346_A1567     TRUE 0.838 9.000 0.750 NA   NA
 7547149 7547150 GBP346_A1567 GBP346_A1568     TRUE 0.672 -43.000 0.667 NA   NA
 7547150 7547151 GBP346_A1568 GBP346_A1569     FALSE 0.068 17.000 0.000 NA   NA
 7547151 7547152 GBP346_A1569 GBP346_A1570     TRUE 0.841 -3.000 0.667 NA   NA
 7547153 7547154 GBP346_A1571 GBP346_A1572     FALSE 0.467 36.000 0.130 NA   NA
 7547155 7547156 GBP346_A1573 GBP346_A1574     FALSE 0.452 18.000 0.091 NA   NA
 7547157 7547158 GBP346_A1575 GBP346_A1576     FALSE 0.055 24.000 0.000 NA   NA
 7547158 7547159 GBP346_A1576 GBP346_A1577     FALSE 0.054 28.000 0.000 NA   NA
 7547160 7547161 GBP346_A1578 GBP346_A1579 treY malQ TRUE 0.982 -3.000 0.141 0.004 Y NA
 7547161 7547162 GBP346_A1579 GBP346_A1580 malQ treZ TRUE 0.982 -3.000 0.167 0.004 Y NA
 7547162 7547163 GBP346_A1580 GBP346_A1581 treZ glgX TRUE 0.962 27.000 0.107 0.002 Y NA
 7547163 7547164 GBP346_A1581 GBP346_A1582 glgX glgB TRUE 0.971 53.000 0.323 0.002 Y NA
 7547164 7547165 GBP346_A1582 GBP346_A1583 glgB   TRUE 0.980 -3.000 0.115 0.004 Y NA
 7547165 7547166 GBP346_A1583 GBP346_A1584     TRUE 0.946 -3.000 0.544 0.004   NA
 7547170 7547171 GBP346_A1587 GBP346_A1589     FALSE 0.203 168.000 0.200 NA   NA
 7547171 7547172 GBP346_A1589 GBP346_A1590     FALSE 0.006 203.000 0.000 NA   NA
 7547175 7547176 GBP346_A1593 GBP346_A1594     FALSE 0.011 170.000 0.000 NA   NA
 7547176 7547177 GBP346_A1594 GBP346_A1595     FALSE 0.569 84.000 0.286 NA   NA
 7547177 7547178 GBP346_A1595 GBP346_A1596     TRUE 0.646 25.000 0.375 NA   NA
 7547178 7547179 GBP346_A1596 GBP346_A1597     FALSE 0.111 456.000 0.000 0.069 Y NA
 7547179 7547180 GBP346_A1597 GBP346_A1598     FALSE 0.051 42.000 0.000 NA   NA
 7547180 7547181 GBP346_A1598 GBP346_A1599     FALSE 0.076 15.000 0.000 NA   NA
 7547181 7547182 GBP346_A1599 GBP346_A1600     TRUE 0.614 32.000 0.308 NA   NA
 7547184 7547185 GBP346_A1602 GBP346_A1603     FALSE 0.001 367.000 0.000 NA   NA
 7547185 7547186 GBP346_A1603 GBP346_A1604     TRUE 0.686 101.000 0.750 NA   NA
 7547186 7547187 GBP346_A1604 GBP346_A1605     TRUE 0.695 36.000 0.600 NA   NA
 7547187 7547188 GBP346_A1605 GBP346_A1606     TRUE 0.766 81.000 0.600 1.000   NA
 7547188 7547189 GBP346_A1606 GBP346_A1607     TRUE 0.890 2.000 0.107 1.000 N NA
 7547189 7547190 GBP346_A1607 GBP346_A1608     TRUE 0.709 17.000 0.143 1.000   NA
 7547191 7547192 GBP346_A1609 GBP346_A1610     TRUE 0.724 46.000 0.800 NA   NA
 7547192 7547193 GBP346_A1610 GBP346_A1611     TRUE 0.877 35.000 0.667 0.048   NA
 7547193 7547194 GBP346_A1611 GBP346_A1612     TRUE 0.759 27.000 0.400 1.000   NA
 7547194 7547195 GBP346_A1612 GBP346_A1613     FALSE 0.510 79.000 0.200 NA   NA
 7547199 7547200 GBP346_A1617 GBP346_A1618     TRUE 0.616 24.000 0.300 NA   NA
 7547200 7547201 GBP346_A1618 GBP346_A1619     FALSE 0.002 260.000 0.000 NA   NA
 7547202 7547203 GBP346_A1620 GBP346_A1621     TRUE 0.776 16.000 0.667 NA   NA
 7547203 7547204 GBP346_A1621 GBP346_A1622     TRUE 0.812 3.000 0.375 NA   NA
 7547204 7547205 GBP346_A1622 GBP346_A1623     FALSE 0.506 137.000 0.625 NA   NA
 7547207 7547208 GBP346_A1625 GBP346_A1626     FALSE 0.594 109.000 0.400 NA   NA
 7547208 7547209 GBP346_A1626 GBP346_A1627     FALSE 0.000 908.000 0.000 NA   NA
 7547209 7547210 GBP346_A1627 GBP346_A1628     FALSE 0.023 139.000 0.000 NA   NA
 7547210 7547211 GBP346_A1628 GBP346_A1629     FALSE 0.046 -40.000 0.000 NA   NA
 7547211 7547212 GBP346_A1629 GBP346_A1630     TRUE 0.739 18.000 0.600 NA   NA
 7547212 7547213 GBP346_A1630 GBP346_A1631     TRUE 0.714 13.000 0.308 NA   NA
 7547213 7547214 GBP346_A1631 GBP346_A1632     TRUE 0.826 4.000 0.462 NA   NA
 7547214 7547215 GBP346_A1632 GBP346_A1633     TRUE 0.786 3.000 0.286 NA   NA
 7547217 7547218 GBP346_A1635 GBP346_A1636     FALSE 0.000 1242.000 0.000 NA   NA
 7547219 7547220 GBP346_A1637 GBP346_A1638     FALSE 0.049 71.000 0.000 NA   NA
 7547221 7547222 GBP346_A1639 GBP346_A1640     FALSE 0.002 282.000 0.000 NA   NA
 7547222 7547223 GBP346_A1640 GBP346_A1641     FALSE 0.050 69.000 0.000 NA   NA
 7547223 7547224 GBP346_A1641 GBP346_A1642     FALSE 0.017 150.000 0.000 NA   NA
 7547224 7547225 GBP346_A1642 GBP346_A1643     TRUE 0.662 -30.000 0.500 NA   NA
 7547227 7547228 GBP346_A1645 GBP346_A1647     FALSE 0.002 260.000 0.000 NA   NA
 7547230 7547231 GBP346_A1648 GBP346_A1649     FALSE 0.001 449.000 0.000 NA   NA
 7547232 7547233 GBP346_A1650 GBP346_A1651     TRUE 0.850 0.000 0.571 NA   NA
 7547233 7547234 GBP346_A1651 GBP346_A1652     FALSE 0.002 274.000 0.000 NA   NA
 7547234 7547235 GBP346_A1652 GBP346_A1653     TRUE 0.809 45.000 0.833 1.000   NA
 7547236 7547237 GBP346_A1654 GBP346_A1655     TRUE 0.752 3.000 0.211 NA   NA
 7547239 7547240 GBP346_A1657 GBP346_A1658     TRUE 0.673 86.000 0.600 NA   NA
 7547240 7547241 GBP346_A1658 GBP346_A1659     TRUE 0.655 -13.000 0.364 NA   NA
 7547241 7547242 GBP346_A1659 GBP346_A1660     TRUE 0.699 53.000 0.636 NA   NA
 7547242 7547243 GBP346_A1660 GBP346_A1661     FALSE 0.564 77.000 0.269 NA   NA
 7547243 7547244 GBP346_A1661 GBP346_A1662     FALSE 0.551 18.000 0.156 NA   NA
 7547244 7547245 GBP346_A1662 GBP346_A1663     TRUE 0.941 45.000 0.879 NA Y NA
 7547245 7547246 GBP346_A1663 GBP346_A1664     TRUE 0.798 16.000 0.848 NA   NA
 7547246 7547247 GBP346_A1664 GBP346_A1665     FALSE 0.001 411.000 0.000 NA   NA
 7547247 7547248 GBP346_A1665 GBP346_A1666     TRUE 0.988 1.000 0.429 0.010 Y NA
 7547249 7547250 GBP346_A1667 GBP346_A1668     TRUE 0.902 2.000 0.000 0.048 N NA
 7547250 7547251 GBP346_A1668 GBP346_A1669     TRUE 0.658 -3.000 0.130 NA   NA
 7547251 7547252 GBP346_A1669 GBP346_A1670     FALSE 0.552 -3.000 0.073 NA   NA
 7547252 7547253 GBP346_A1670 GBP346_A1671     FALSE 0.003 240.000 0.000 NA   NA
 7547253 7547254 GBP346_A1671 GBP346_A1672     FALSE 0.181 64.000 0.015 NA   NA
 7547254 7547255 GBP346_A1672 GBP346_A1673   acpA_1 FALSE 0.105 198.000 0.031 1.000   NA
 7547259 7547260 GBP346_A1676 GBP346_A1678     FALSE 0.055 25.000 0.000 NA   NA
 7547261 7547262 GBP346_A1679 GBP346_A1680     TRUE 0.675 19.000 0.391 NA   NA
 7547268 7547269 GBP346_A1686 GBP346_A1687     FALSE 0.001 332.000 0.000 NA   NA
 7547273 7547274 GBP346_A1691 GBP346_A1692     TRUE 0.681 -3.000 0.154 NA   NA
 7547274 7547275 GBP346_A1692 GBP346_A1693     FALSE 0.141 -204.000 0.013 NA   NA
 7547275 7547276 GBP346_A1693 GBP346_A1694     FALSE 0.376 5.000 0.020 NA   NA
 7547276 7547277 GBP346_A1694 GBP346_A1695     TRUE 0.945 29.000 0.059 0.048 Y NA
 7547277 7547278 GBP346_A1695 GBP346_A1696     TRUE 0.974 -3.000 0.059 0.020 Y NA
 7547279 7547280 GBP346_A1697 GBP346_A1698     TRUE 0.971 0.000 0.199 1.000 Y NA
 7547280 7547281 GBP346_A1698 GBP346_A1699     TRUE 0.844 -3.000 0.048 1.000 N NA
 7547281 7547282 GBP346_A1699 GBP346_A1700     TRUE 0.788 11.000 0.014 1.000 N NA
 7547282 7547283 GBP346_A1700 GBP346_A1701     TRUE 0.681 14.000 0.079 1.000   NA
 7547283 7547284 GBP346_A1701 GBP346_A1702     TRUE 0.808 13.000 0.289 1.000   NA
 7547284 7547285 GBP346_A1702 GBP346_A1703     TRUE 0.880 101.000 0.156 NA Y NA
 7547286 7547287 GBP346_A1704 GBP346_A1705     TRUE 0.806 -7.000 0.448 1.000   NA
 7547287 7547288 GBP346_A1705 GBP346_A1706     TRUE 0.932 13.000 0.440 0.001   NA
 7547288 7547289 GBP346_A1706 GBP346_A1707     FALSE 0.241 165.000 0.078 1.000   NA
 7547289 7547290 GBP346_A1707 GBP346_A1708     FALSE 0.002 276.000 0.000 NA   NA
 7547290 7547291 GBP346_A1708 GBP346_A1709     FALSE 0.001 304.000 0.000 NA   NA
 7547291 7547292 GBP346_A1709 GBP346_A1710     TRUE 0.612 15.000 0.172 NA   NA
 7547292 7547293 GBP346_A1710 GBP346_A1711     TRUE 0.750 11.000 0.345 NA   NA
 7547293 7547294 GBP346_A1711 GBP346_A1712     TRUE 0.677 98.000 0.667 NA   NA
 7547295 7547296 GBP346_A1713 GBP346_A1714 galU_1 valS TRUE 0.645 87.000 0.010 1.000 N NA
 7547297 7547298 GBP346_A1715 GBP346_A1716   mtnN TRUE 0.840 -3.000 0.043 1.000 N NA
 7547301 7547302 GBP346_A1718 GBP346_A1720     TRUE 0.724 79.000 1.000 NA   NA
 7547302 7547303 GBP346_A1720 GBP346_A1721     TRUE 0.630 14.000 0.182 NA   NA
 7547303 7547304 GBP346_A1721 GBP346_A1722     TRUE 0.704 -3.000 0.182 NA   NA
 7547304 7547305 GBP346_A1722 GBP346_A1723     TRUE 0.664 17.000 0.286 NA   NA
 7547306 7547307 GBP346_A1724 GBP346_A1725     FALSE 0.463 139.000 0.500 NA   NA
 7547308 7547309 GBP346_A1726 GBP346_A1727     TRUE 0.825 32.000 1.000 1.000   NA
 7547309 7547310 GBP346_A1727 GBP346_A1728     FALSE 0.240 35.000 0.031 NA   NA
 7547310 7547311 GBP346_A1728 GBP346_A1729   wrbA TRUE 0.839 -3.000 0.657 NA   NA
 7547313 7547314 GBP346_A1731 GBP346_A1732     FALSE 0.047 85.000 0.000 NA   NA
 7547315 7547316 GBP346_A1733 GBP346_A1734     TRUE 0.716 100.000 0.073 0.055   NA
 7547316 7547317 GBP346_A1734 GBP346_A1735   aroC TRUE 0.639 84.000 0.008 1.000 N NA
 7547317 7547318 GBP346_A1735 GBP346_A1737 aroC   FALSE 0.247 -3.000 0.004 NA   NA
 7547320 7547321 GBP346_A1738 GBP346_A1739     TRUE 0.721 45.000 0.300 1.000   NA
 7547324 7547325 GBP346_A1742 GBP346_A1743     FALSE 0.005 509.000 0.000 1.000   NA
 7547328 7547329 GBP346_A1746 GBP346_A1747     TRUE 0.992 2.000 0.789 0.001 Y NA
 7547330 7547331 GBP346_A1748 GBP346_A1749     TRUE 0.844 44.000 0.412 1.000 N NA
 7547331 7547332 GBP346_A1749 GBP346_A1750     TRUE 0.680 15.000 0.267 NA   NA
 7547333 7547334 GBP346_A1751 GBP346_A1752     FALSE 0.002 991.000 0.027 NA   NA
 7547334 7547335 GBP346_A1752 GBP346_A1753     FALSE 0.523 74.000 0.202 NA   NA
 7547335 7547336 GBP346_A1753 GBP346_A1754   relA TRUE 0.718 45.000 0.202 NA N NA
 7547336 7547337 GBP346_A1754 GBP346_A1755 relA   FALSE 0.043 109.000 0.000 NA   NA
 7547339 7547340 GBP346_A1757 GBP346_A1758 thrS infC TRUE 0.916 104.000 0.186 1.000 Y NA
 7547340 7547341 GBP346_A1758 GBP346_A1759 infC rpmI TRUE 0.733 193.000 0.652 1.000 Y NA
 7547341 7547342 GBP346_A1759 GBP346_A1760 rpmI rplT TRUE 0.977 31.000 0.928 0.012 Y NA
 7547342 7547343 GBP346_A1760 GBP346_A1761 rplT pheS TRUE 0.883 131.000 0.202 1.000 Y NA
 7547343 7547344 GBP346_A1761 GBP346_A1762 pheS pheT TRUE 0.976 88.000 0.574 0.001 Y NA
 7547344 7547345 GBP346_A1762 GBP346_A1763 pheT ihfA TRUE 0.795 73.000 0.208 1.000 N NA
 7547345 7547346 GBP346_A1763 GBP346_A1764 ihfA   TRUE 0.861 59.000 0.535 1.000 N NA
 7547347 7547348 GBP346_A1765 GBP346_A1766     FALSE 0.001 467.000 0.000 NA   NA
 7547348 7547349 GBP346_A1766 GBP346_A1767     FALSE 0.001 402.000 0.000 NA   NA
 7547349 7547350 GBP346_A1767 GBP346_A1768     FALSE 0.004 229.000 0.000 NA   NA
 7547350 7547351 GBP346_A1768 GBP346_A1769     TRUE 0.836 11.000 0.900 NA   NA
 7547351 7547352 GBP346_A1769 GBP346_A1770     FALSE 0.052 41.000 0.000 NA   NA
 7547353 7547354 GBP346_A1771 GBP346_A1772     FALSE 0.000 564.000 0.000 NA   NA
 7547355 7547356 GBP346_A1773 GBP346_A1774     FALSE 0.458 149.000 0.733 NA   NA
 7547356 7547357 GBP346_A1774 GBP346_A1775     FALSE 0.003 239.000 0.000 NA   NA
 7547358 7547359 GBP346_A1776 GBP346_A1777     FALSE 0.013 165.000 0.000 NA   NA
 7547361 7547362 GBP346_A1779 GBP346_A1780     FALSE 0.053 419.000 0.000 NA Y NA
 7547362 7547363 GBP346_A1780 GBP346_A1781     FALSE 0.518 64.000 0.013 NA N NA
 7547363 7547364 GBP346_A1781 GBP346_A1782     FALSE 0.004 305.000 0.004 NA   NA
 7547364 7547365 GBP346_A1782 GBP346_A1783     TRUE 0.851 -3.000 0.759 NA   NA
 7547365 7547366 GBP346_A1783 GBP346_A1784     TRUE 0.823 92.000 0.342 1.000 N NA
 7547366 7547367 GBP346_A1784 GBP346_A1785   rbfA TRUE 0.951 58.000 0.530 1.000 Y NA
 7547367 7547368 GBP346_A1785 GBP346_A1786 rbfA   TRUE 0.940 54.000 0.318 1.000 Y NA
 7547369 7547370 GBP346_A1787 GBP346_A1788     TRUE 0.810 23.000 0.733 1.000   NA
 7547370 7547371 GBP346_A1788 GBP346_A1789     TRUE 0.921 68.000 0.833 0.083 N NA
 7547371 7547372 GBP346_A1789 GBP346_A1790     TRUE 0.836 100.000 0.500 1.000 N NA
 7547372 7547373 GBP346_A1790 GBP346_A1791     FALSE 0.089 200.000 0.125 NA   NA
 7547374 7547375 GBP346_A1792 GBP346_A1793 typA sucA FALSE 0.033 339.000 0.000 1.000 N NA
 7547375 7547376 GBP346_A1793 GBP346_A1794 sucA sucB TRUE 0.909 135.000 0.667 1.000 Y NA
 7547376 7547377 GBP346_A1794 GBP346_A1795 sucB lpdA_1 TRUE 0.926 100.000 0.253 1.000 Y NA
 7547377 7547378 GBP346_A1795 GBP346_A1796 lpdA_1   FALSE 0.376 104.000 0.103 NA   NA
 7547378 7547379 GBP346_A1796 GBP346_A1797     FALSE 0.135 195.000 0.206 NA   NA
 7547382 7547383 GBP346_A1799 GBP346_A1801     FALSE 0.120 175.000 0.104 NA   NA
 7547383 7547384 GBP346_A1801 GBP346_A1802     TRUE 0.722 50.000 0.778 NA   NA
 7547385 7547386 GBP346_A1803 GBP346_A1804     FALSE 0.006 206.000 0.000 NA   NA
 7547386 7547387 GBP346_A1804 GBP346_A1805     FALSE 0.590 81.000 0.333 NA   NA
 7547387 7547388 GBP346_A1805 GBP346_A1806     TRUE 0.919 83.000 0.467 NA Y NA
 7547388 7547389 GBP346_A1806 GBP346_A1807     TRUE 0.965 -3.000 0.450 NA Y NA
 7547389 7547390 GBP346_A1807 GBP346_A1808   cpaB_1 TRUE 0.920 80.000 0.483 NA Y NA
 7547390 7547391 GBP346_A1808 GBP346_A1809 cpaB_1   TRUE 0.926 64.000 0.468 NA Y NA
 7547391 7547392 GBP346_A1809 GBP346_A1810     TRUE 0.953 67.000 0.696 1.000 Y NA
 7547392 7547393 GBP346_A1810 GBP346_A1811   tadA_1 TRUE 0.981 4.000 0.732 1.000 Y NA
 7547393 7547394 GBP346_A1811 GBP346_A1812 tadA_1   TRUE 0.954 -7.000 0.822 NA Y NA
 7547394 7547395 GBP346_A1812 GBP346_A1813     TRUE 0.974 6.000 0.844 NA Y NA
 7547395 7547396 GBP346_A1813 GBP346_A1814     TRUE 0.871 37.000 0.068 NA Y NA
 7547396 7547397 GBP346_A1814 GBP346_A1815     FALSE 0.401 22.000 0.083 NA   NA
 7547397 7547398 GBP346_A1815 GBP346_A1816     TRUE 0.619 8.000 0.111 NA   NA
 7547398 7547399 GBP346_A1816 GBP346_A1817     FALSE 0.519 17.000 0.118 NA   NA
 7547399 7547400 GBP346_A1817 GBP346_A1818     FALSE 0.372 91.000 0.088 NA   NA
 7547402 7547403 GBP346_A1820 GBP346_A1822     TRUE 0.755 15.000 0.500 NA   NA
 7547404 7547405 GBP346_A1821 GBP346_A1823     FALSE 0.536 21.000 0.174 NA   NA
 7547405 7547406 GBP346_A1823 GBP346_A1824     TRUE 0.658 -3.000 0.130 NA   NA
 7547406 7547407 GBP346_A1824 GBP346_A1825     FALSE 0.209 75.000 0.026 NA   NA
 7547407 7547408 GBP346_A1825 GBP346_A1826     FALSE 0.124 217.000 0.000 1.000 N NA
 7547408 7547409 GBP346_A1826 GBP346_A1827     FALSE 0.006 204.000 0.000 NA   NA
 7547410 7547411 GBP346_A1828 GBP346_A1829     FALSE 0.431 144.000 0.172 1.000   NA
 7547411 7547412 GBP346_A1829 GBP346_A1830     TRUE 0.725 47.000 0.317 1.000   NA
 7547413 7547414 GBP346_A1831 GBP346_A1832     FALSE 0.004 237.000 0.000 NA   NA
 7547414 7547415 GBP346_A1832 GBP346_A1833     FALSE 0.320 151.000 0.300 NA   NA
 7547416 7547417 GBP346_A1834 GBP346_A1835     TRUE 0.640 42.000 0.400 NA   NA
 7547418 7547419 GBP346_A1836 GBP346_A1837     FALSE 0.015 156.000 0.000 NA   NA
 7547420 7547421 GBP346_A1838 GBP346_A1839 rnr   TRUE 0.792 132.000 0.147 0.015 N NA
 7547421 7547422 GBP346_A1839 GBP346_A1840     FALSE 0.215 11.000 0.004 NA   NA
 7547422 7547423 GBP346_A1840 GBP346_A1841     TRUE 0.640 63.000 0.400 NA   NA
 7547423 7547424 GBP346_A1841 GBP346_A1842   rpiA FALSE 0.074 269.000 0.005 1.000 N NA
 7547424 7547425 GBP346_A1842 GBP346_A1843 rpiA   FALSE 0.034 338.000 0.000 1.000 N NA
 7547425 7547426 GBP346_A1843 GBP346_A1845     TRUE 0.793 100.000 0.938 1.000   NA
 7547427 7547428 GBP346_A1844 GBP346_A1846     FALSE 0.459 90.000 0.143 NA   NA
 7547428 7547429 GBP346_A1846 GBP346_A1847     TRUE 0.956 130.000 0.857 0.047 Y NA
 7547429 7547430 GBP346_A1847 GBP346_A1848   pyrD TRUE 0.634 111.000 0.022 1.000 N NA
 7547430 7547431 GBP346_A1848 GBP346_A1849 pyrD   TRUE 0.667 105.000 0.044 1.000 N NA
 7547431 7547432 GBP346_A1849 GBP346_A1850   aat TRUE 0.939 34.000 0.285 1.000 Y NA
 7547432 7547433 GBP346_A1850 GBP346_A1851 aat   TRUE 0.840 9.000 0.058 1.000 N NA
 7547433 7547434 GBP346_A1851 GBP346_A1852     FALSE 0.001 373.000 0.000 NA   NA
 7547435 7547436 GBP346_A1853 GBP346_A1854     TRUE 0.775 5.000 0.273 NA   NA
 7547436 7547437 GBP346_A1854 GBP346_A1855     TRUE 0.725 30.000 0.053 1.000 N NA
 7547437 7547438 GBP346_A1855 GBP346_A1856     TRUE 0.727 91.000 1.000 NA   NA
 7547438 7547439 GBP346_A1856 GBP346_A1857     FALSE 0.053 33.000 0.000 NA   NA
 7547441 7547442 GBP346_A1859 GBP346_A1860 ssuD_1   TRUE 0.864 18.000 0.340 1.000 N NA
 7547442 7547443 GBP346_A1860 GBP346_A1861     TRUE 0.972 -3.000 0.321 1.000 Y NA
 7547443 7547444 GBP346_A1861 GBP346_A1862     TRUE 0.895 89.000 0.435 0.083 N NA
 7547444 7547445 GBP346_A1862 GBP346_A1863     FALSE 0.456 129.000 0.261 NA   NA
 7547445 7547446 GBP346_A1863 GBP346_A1864     TRUE 0.725 74.000 0.933 NA   NA
 7547447 7547448 GBP346_A1865 GBP346_A1866     FALSE 0.049 72.000 0.000 NA   NA
 7547451 7547452 GBP346_A1869 GBP346_A1870     FALSE 0.052 59.000 0.000 NA   NA
 7547454 7547455 GBP346_A1872 GBP346_A1873     FALSE 0.042 276.000 0.019 NA N NA
 7547455 7547456 GBP346_A1873 GBP346_A1874     FALSE 0.001 356.000 0.000 NA   NA
 7547456 7547457 GBP346_A1874 GBP346_A1875     FALSE 0.008 315.000 0.030 NA   NA
 7547458 7547459 GBP346_A1876 GBP346_A1877   nodI TRUE 0.992 5.000 0.955 0.001 Y NA
 7547461 7547462 GBP346_A1879 GBP346_A1880     TRUE 0.641 34.000 0.389 NA   NA
 7547464 7547465 GBP346_A1882 GBP346_A1883 lexA   FALSE 0.051 64.000 0.000 NA   NA
 7547466 7547467 GBP346_A1884 GBP346_A1885   cysT TRUE 0.797 133.000 0.097 0.002 N NA
 7547467 7547468 GBP346_A1885 GBP346_A1886 cysT cysW TRUE 0.975 -3.000 0.935 0.001 N NA
 7547468 7547469 GBP346_A1886 GBP346_A1887 cysW   TRUE 0.969 14.000 0.587 1.000 Y NA
 7547469 7547470 GBP346_A1887 GBP346_A1888     TRUE 0.712 70.000 0.058 1.000 N NA
 7547470 7547471 GBP346_A1888 GBP346_A1889     FALSE 0.536 115.000 0.294 NA   NA
 7547471 7547472 GBP346_A1889 GBP346_A1890     FALSE 0.366 95.000 0.088 NA   NA
 7547474 7547475 GBP346_A1892 GBP346_A1893     TRUE 0.950 71.000 0.600 1.000 Y NA
 7547475 7547476 GBP346_A1893 GBP346_A1894     TRUE 0.782 30.000 0.129 1.000 N NA
 7547476 7547477 GBP346_A1894 GBP346_A1895   rbsK_1 TRUE 0.919 -3.000 0.355 1.000 N NA
 7547477 7547478 GBP346_A1895 GBP346_A1896 rbsK_1   FALSE 0.132 215.000 0.000 1.000 N NA
 7547478 7547479 GBP346_A1896 GBP346_A1897     FALSE 0.001 329.000 0.000 NA   NA
 7547479 7547480 GBP346_A1897 GBP346_A1898     FALSE 0.032 177.000 0.010 NA   NA
 7547480 7547481 GBP346_A1898 GBP346_A1899     TRUE 0.628 124.000 0.683 NA   NA
 7547481 7547482 GBP346_A1899 GBP346_A1900     TRUE 0.870 0.000 0.761 NA   NA
 7547482 7547483 GBP346_A1900 GBP346_A1901     FALSE 0.154 -33.000 0.011 NA   NA
 7547483 7547484 GBP346_A1901 GBP346_A1902     FALSE 0.304 108.000 0.068 NA   NA
 7547484 7547485 GBP346_A1902 GBP346_A1903     FALSE 0.040 253.000 0.000 NA N NA
 7547485 7547486 GBP346_A1903 GBP346_A1904     FALSE 0.448 52.000 0.121 NA   NA
 7547486 7547487 GBP346_A1904 GBP346_A1905     FALSE 0.200 140.000 0.000 1.000   NA
 7547487 7547488 GBP346_A1905 GBP346_A1906     TRUE 0.627 48.000 0.000 1.000 N NA
 7547488 7547489 GBP346_A1906 GBP346_A1907     TRUE 0.959 27.000 0.795 1.000 Y NA
 7547489 7547490 GBP346_A1907 GBP346_A1908     FALSE 0.000 558.000 0.000 NA   NA
 7547490 7547491 GBP346_A1908 GBP346_A1909     FALSE 0.514 26.000 0.160 NA   NA
 7547491 7547492 GBP346_A1909 GBP346_A1910   cpaB_2 TRUE 0.943 13.000 0.250 NA Y NA
 7547492 7547493 GBP346_A1910 GBP346_A1911 cpaB_2   TRUE 0.929 35.000 0.500 NA Y NA
 7547493 7547494 GBP346_A1911 GBP346_A1912     FALSE 0.518 34.000 0.175 NA   NA
 7547494 7547495 GBP346_A1912 GBP346_A1913     TRUE 0.695 11.000 0.222 NA   NA
 7547495 7547496 GBP346_A1913 GBP346_A1914     TRUE 0.941 -39.000 0.472 1.000 Y NA
 7547496 7547497 GBP346_A1914 GBP346_A1915     TRUE 0.943 -3.000 0.103 NA Y NA
 7547497 7547498 GBP346_A1915 GBP346_A1916     TRUE 0.946 -3.000 0.120 NA Y NA
 7547498 7547499 GBP346_A1916 GBP346_A1917     TRUE 0.969 -3.000 0.607 NA Y NA
 7547499 7547500 GBP346_A1917 GBP346_A1918     TRUE 0.949 -3.000 0.143 NA Y NA
 7547500 7547501 GBP346_A1918 GBP346_A1919     TRUE 0.744 -7.000 0.571 NA   NA
 7547501 7547502 GBP346_A1919 GBP346_A1920     FALSE 0.002 300.000 0.000 NA   NA
 7547502 7547503 GBP346_A1920 GBP346_A1921     FALSE 0.421 45.000 0.105 NA   NA
 7547503 7547504 GBP346_A1921 GBP346_A1922     TRUE 0.818 -3.000 0.500 NA   NA
 7547504 7547505 GBP346_A1922 GBP346_A1923     FALSE 0.592 2.000 0.074 NA   NA
 7547505 7547506 GBP346_A1923 GBP346_A1924     TRUE 0.990 3.000 0.692 0.010 Y NA
 7547507 7547508 GBP346_A1925 GBP346_A1926     FALSE 0.011 353.000 0.000 1.000   NA
 7547509 7547510 GBP346_A1927 GBP346_A1928     TRUE 0.848 17.000 0.211 1.000 N NA
 7547510 7547511 GBP346_A1928 GBP346_A1929   oprA TRUE 0.954 -3.000 0.368 0.047 N NA
 7547511 7547512 GBP346_A1929 GBP346_A1931 oprA   FALSE 0.602 -13.000 0.250 NA   NA
 7547513 7547514 GBP346_A1930 GBP346_A1932     FALSE 0.107 -3.000 0.000 NA   NA
 7547514 7547515 GBP346_A1932 GBP346_A1933     FALSE 0.052 59.000 0.000 NA   NA
 7547518 7547519 GBP346_A1936 GBP346_A1937     TRUE 0.847 150.000 0.400 1.000 Y NA
 7547519 7547520 GBP346_A1937 GBP346_A1938     TRUE 0.939 121.000 0.700 1.000 Y NA
 7547520 7547521 GBP346_A1938 GBP346_A1939     TRUE 0.871 -3.000 0.421 1.000   NA
 7547522 7547523 GBP346_A1940 GBP346_A1941     TRUE 0.802 -3.000 0.429 NA   NA
 7547523 7547524 GBP346_A1941 GBP346_A1942     TRUE 0.765 9.000 0.333 NA   NA
 7547524 7547525 GBP346_A1942 GBP346_A1943     TRUE 0.612 77.000 0.375 NA   NA
 7547525 7547526 GBP346_A1943 GBP346_A1944     TRUE 0.650 53.000 0.438 NA   NA
 7547526 7547527 GBP346_A1944 GBP346_A1945     FALSE 0.003 240.000 0.000 NA   NA
 7547528 7547529 GBP346_A1946 GBP346_A1947     TRUE 0.775 102.000 0.542 NA N NA
 7547529 7547530 GBP346_A1947 GBP346_A1948   rbsA TRUE 0.918 -6.000 0.125 NA Y NA
 7547530 7547531 GBP346_A1948 GBP346_A1949 rbsA   TRUE 0.936 -7.000 0.111 1.000 Y NA
 7547531 7547532 GBP346_A1949 GBP346_A1950     TRUE 0.628 -3.000 0.111 NA   NA
 7547532 7547533 GBP346_A1950 GBP346_A1951     TRUE 0.678 -3.000 0.150 NA   NA
 7547533 7547534 GBP346_A1951 GBP346_A1952     TRUE 0.791 31.000 0.150 1.000 N NA
 7547534 7547535 GBP346_A1952 GBP346_A1953     TRUE 0.879 -3.000 0.120 1.000 N NA
 7547535 7547536 GBP346_A1953 GBP346_A1954     FALSE 0.048 90.000 0.000 NA   NA
 7547536 7547537 GBP346_A1954 GBP346_A1955     FALSE 0.107 -3.000 0.000 NA   NA
 7547537 7547538 GBP346_A1955 GBP346_A1956     FALSE 0.376 35.000 0.079 NA   NA
 7547538 7547539 GBP346_A1956 GBP346_A1957     TRUE 0.624 56.000 0.342 NA   NA
 7547539 7547540 GBP346_A1957 GBP346_A1958     TRUE 0.638 59.000 0.382 NA   NA
 7547540 7547541 GBP346_A1958 GBP346_A1959     TRUE 0.666 38.000 0.176 1.000   NA
 7547541 7547542 GBP346_A1959 GBP346_A1960     TRUE 0.972 -3.000 0.333 1.000 Y NA
 7547542 7547543 GBP346_A1960 GBP346_A1961     FALSE 0.409 -3.000 0.031 NA   NA
 7547543 7547544 GBP346_A1961 GBP346_A1962     FALSE 0.467 -3.000 0.046 NA   NA
 7547545 7547546 GBP346_A1963 GBP346_A1964     FALSE 0.001 498.000 0.000 NA   NA
 7547546 7547547 GBP346_A1964 GBP346_A1965     FALSE 0.001 385.000 0.000 NA   NA
 7547548 7547549 GBP346_A1966 GBP346_A1967     TRUE 0.966 49.000 0.200 0.002 Y NA
 7547549 7547550 GBP346_A1967 GBP346_A1968   pvdA TRUE 0.960 -3.000 0.300 NA Y NA
 7547550 7547551 GBP346_A1968 GBP346_A1969 pvdA   TRUE 0.762 48.000 0.333 NA N NA
 7547551 7547552 GBP346_A1969 GBP346_A1970     FALSE 0.442 65.000 0.012 1.000   NA
 7547553 7547554 GBP346_A1971 GBP346_A1972   cobO TRUE 0.892 5.000 0.069 0.009   NA
 7547554 7547555 GBP346_A1972 GBP346_A1973 cobO   TRUE 0.739 59.000 0.026 0.009   NA
 7547556 7547557 GBP346_A1975 GBP346_A1976   hoxN FALSE 0.001 401.000 0.000 NA   NA
 7547557 7547558 GBP346_A1976 GBP346_A1977 hoxN cobW FALSE 0.481 122.000 0.072 1.000   NA
 7547558 7547559 GBP346_A1977 GBP346_A1978 cobW cobN TRUE 0.709 67.000 0.274 1.000   NA
 7547559 7547560 GBP346_A1978 GBP346_A1979 cobN   FALSE 0.313 -3.000 0.013 NA   NA
 7547560 7547561 GBP346_A1979 GBP346_A1980     FALSE 0.574 -3.000 0.081 NA   NA
 7547561 7547562 GBP346_A1980 GBP346_A1982     TRUE 0.924 81.000 0.568 NA Y NA
 7547564 7547565 GBP346_A1983 GBP346_A1984     FALSE 0.055 25.000 0.000 NA   NA
 7547566 7547567 GBP346_A1985 GBP346_A1986     TRUE 0.829 -3.000 0.571 NA   NA
 7547567 7547568 GBP346_A1986 GBP346_A1987     FALSE 0.193 170.000 0.200 NA   NA
 7547568 7547569 GBP346_A1987 GBP346_A1988     FALSE 0.012 345.000 0.000 1.000   NA
 7547569 7547570 GBP346_A1988 GBP346_A1989   cobI TRUE 0.979 -3.000 0.097 0.008 Y NA
 7547570 7547571 GBP346_A1989 GBP346_A1990 cobI   TRUE 0.982 -3.000 0.191 0.008 Y NA
 7547571 7547572 GBP346_A1990 GBP346_A1991   cobG TRUE 0.826 -7.000 0.149 1.000 N NA
 7547572 7547573 GBP346_A1991 GBP346_A1993 cobG   FALSE 0.004 224.000 0.000 NA   NA
 7547574 7547575 GBP346_A1994 GBP346_A1995 cobL cbiD TRUE 0.975 -3.000 0.043 0.008 Y NA
 7547575 7547576 GBP346_A1995 GBP346_A1996 cbiD cobK TRUE 0.980 -3.000 0.123 0.008 Y NA
 7547576 7547577 GBP346_A1996 GBP346_A1997 cobK cobM FALSE 0.284 339.000 0.076 0.008 Y NA
 7547578 7547579 GBP346_A1998 GBP346_A1999     FALSE 0.532 131.000 0.500 NA   NA
 7547581 7547582 GBP346_A2001 GBP346_A2002     FALSE 0.549 118.000 0.333 NA   NA
 7547582 7547583 GBP346_A2002 GBP346_A2003     FALSE 0.123 0.000 0.000 NA   NA
 7547585 7547586 GBP346_A2005 GBP346_A2006     FALSE 0.057 284.000 0.000 1.000 N NA
 7547587 7547588 GBP346_A2007 GBP346_A2008     FALSE 0.447 -3.000 0.041 NA   NA
 7547589 7547590 GBP346_A2009 GBP346_A2010   arcC FALSE 0.557 0.000 0.061 NA   NA
 7547590 7547591 GBP346_A2010 GBP346_A2011 arcC argF_2 TRUE 0.943 86.000 0.483 1.000 Y NA
 7547591 7547592 GBP346_A2011 GBP346_A2012 argF_2 arcA TRUE 0.923 65.000 0.150 1.000 Y NA
 7547592 7547593 GBP346_A2012 GBP346_A2013 arcA   TRUE 0.977 -3.000 0.562 1.000 Y NA
 7547597 7547598 GBP346_A2017 GBP346_A2018     FALSE 0.241 36.000 0.031 NA   NA
 7547598 7547599 GBP346_A2018 GBP346_A2019     TRUE 0.977 -3.000 0.542 1.000 Y NA
 7547599 7547600 GBP346_A2019 GBP346_A2020     TRUE 0.976 -3.000 0.489 1.000 Y NA
 7547600 7547601 GBP346_A2020 GBP346_A2021     TRUE 0.960 -3.000 0.521 0.046 N NA
 7547602 7547603 GBP346_A2022 GBP346_A2023     FALSE 0.389 -3.000 0.026 NA   NA
 7547604 7547605 GBP346_A2024 GBP346_A2025     TRUE 0.754 77.000 0.500 1.000   NA
 7547608 7547609 GBP346_A2028 GBP346_A2029     TRUE 0.969 38.000 0.333 0.006 Y NA
 7547609 7547610 GBP346_A2029 GBP346_A2030     FALSE 0.556 43.000 0.222 NA   NA
 7547611 7547612 GBP346_A2031 GBP346_A2032     FALSE 0.499 165.000 0.219 1.000 N NA
 7547613 7547614 GBP346_A2033 GBP346_A2034     FALSE 0.015 157.000 0.000 NA   NA
 7547614 7547615 GBP346_A2034 GBP346_A2036     FALSE 0.004 231.000 0.000 NA   NA
 7547617 7547618 GBP346_A2037 GBP346_A2038     FALSE 0.575 -13.000 0.211 NA   NA
 7547618 7547619 GBP346_A2038 GBP346_A2039     FALSE 0.149 62.000 0.008 NA   NA
 7547619 7547620 GBP346_A2039 GBP346_A2040     FALSE 0.459 28.000 0.011 1.000   NA
 7547620 7547621 GBP346_A2040 GBP346_A2041     TRUE 0.665 56.000 0.172 1.000   NA
 7547621 7547622 GBP346_A2041 GBP346_A2042   argG_2 TRUE 0.657 41.000 0.005 1.000 N NA
 7547622 7547623 GBP346_A2042 GBP346_A2043 argG_2 argH_2 TRUE 0.971 -3.000 0.278 1.000 Y NA
 7547623 7547624 GBP346_A2043 GBP346_A2044 argH_2   TRUE 0.705 18.000 0.004 1.000 N NA
 7547624 7547625 GBP346_A2044 GBP346_A2045     FALSE 0.352 54.000 0.069 NA   NA
 7547625 7547626 GBP346_A2045 GBP346_A2046     FALSE 0.581 -3.000 0.086 NA   NA
 7547626 7547627 GBP346_A2046 GBP346_A2047     TRUE 0.841 -3.000 0.667 NA   NA
 7547627 7547628 GBP346_A2047 GBP346_A2048     TRUE 0.885 35.000 0.005 1.000 Y NA
 7547628 7547629 GBP346_A2048 GBP346_A2049   ltaE TRUE 0.883 43.000 0.003 1.000 Y NA
 7547629 7547630 GBP346_A2049 GBP346_A2050 ltaE   TRUE 0.845 -3.000 0.050 1.000 N NA
 7547630 7547631 GBP346_A2050 GBP346_A2051     TRUE 0.908 -3.000 0.033 0.052 N NA
 7547631 7547632 GBP346_A2051 GBP346_A2052     TRUE 0.778 6.000 0.300 NA   NA
 7547632 7547633 GBP346_A2052 GBP346_A2053     TRUE 0.668 -34.000 0.571 NA   NA
 7547633 7547634 GBP346_A2053 GBP346_A2054     TRUE 0.674 125.000 0.429 1.000   NA
 7547635 7547636 GBP346_A2055 GBP346_A2056     FALSE 0.003 252.000 0.000 NA   NA
 7547636 7547637 GBP346_A2056 GBP346_A2057     FALSE 0.005 546.000 0.000 1.000   NA
 7547637 7547638 GBP346_A2057 GBP346_A2058     FALSE 0.018 298.000 0.000 1.000   NA
 7547638 7547639 GBP346_A2058 GBP346_A2059     FALSE 0.004 588.000 0.000 1.000   NA
 7547639 7547640 GBP346_A2059 GBP346_A2060     FALSE 0.033 128.000 0.000 NA   NA
 7547640 7547641 GBP346_A2060 GBP346_A2061     FALSE 0.001 311.000 0.000 NA   NA
 7547641 7547642 GBP346_A2061 GBP346_A2062     FALSE 0.007 428.000 0.000 1.000   NA
 7547643 7547644 GBP346_A2063 GBP346_A2064     FALSE 0.000 1542.000 0.000 NA   NA
 7547644 7547645 GBP346_A2064 GBP346_A2065     FALSE 0.001 455.000 0.000 NA   NA
 7547645 7547646 GBP346_A2065 GBP346_A2066     FALSE 0.037 122.000 0.000 NA   NA
 7547646 7547647 GBP346_A2066 GBP346_A2067     FALSE 0.052 56.000 0.000 NA   NA
 7547648 7547649 GBP346_A2068 GBP346_A2069     FALSE 0.003 249.000 0.000 NA   NA
 7547649 7547650 GBP346_A2069 GBP346_A2070     FALSE 0.076 15.000 0.000 NA   NA
 7547650 7547651 GBP346_A2070 GBP346_A2071     FALSE 0.024 137.000 0.000 NA   NA
 7547652 7547653 GBP346_A2072 GBP346_A2073     TRUE 0.842 7.000 0.667 NA   NA
 7547653 7547654 GBP346_A2073 GBP346_A2074     FALSE 0.006 203.000 0.000 NA   NA
 7547656 7547657 GBP346_A2076 GBP346_A2077     FALSE 0.063 203.000 0.000 1.000   NA
 7547658 7547659 GBP346_A2078 GBP346_A2079     FALSE 0.054 29.000 0.000 NA   NA
 7547660 7547661 GBP346_A2080 GBP346_A2081     FALSE 0.269 34.000 0.040 NA   NA
 7547661 7547662 GBP346_A2081 GBP346_A2082     TRUE 0.696 -10.000 0.450 NA   NA
 7547662 7547663 GBP346_A2082 GBP346_A2083     TRUE 0.716 6.000 0.184 NA   NA
 7547663 7547664 GBP346_A2083 GBP346_A2084     TRUE 0.748 -3.000 0.250 NA   NA
 7547665 7547666 GBP346_A2085 GBP346_A2086     TRUE 0.845 -3.000 0.700 NA   NA
 7547667 7547668 GBP346_A2087 GBP346_A2088     FALSE 0.054 212.000 0.000 1.000   NA
 7547671 7547672 GBP346_A2091 GBP346_A2092     TRUE 0.897 -3.000 0.191 1.000 N NA
 7547673 7547674 GBP346_A2093 GBP346_A2094     FALSE 0.167 181.000 0.214 NA   NA
 7547674 7547675 GBP346_A2094 GBP346_A2095   hutU_1 FALSE 0.336 19.000 0.051 NA   NA
 7547675 7547676 GBP346_A2095 GBP346_A2096 hutU_1   TRUE 0.757 37.000 0.102 1.000 N NA
 7547676 7547677 GBP346_A2096 GBP346_A2097     TRUE 0.875 18.000 0.444 1.000 N NA
 7547677 7547678 GBP346_A2097 GBP346_A2098     FALSE 0.596 90.000 0.333 NA   NA
 7547678 7547679 GBP346_A2098 GBP346_A2099     FALSE 0.002 291.000 0.000 NA   NA
 7547680 7547681 GBP346_A2100 GBP346_A2101     TRUE 0.705 -48.000 1.000 NA   NA
 7547681 7547682 GBP346_A2101 GBP346_A2102     FALSE 0.558 121.000 0.375 NA   NA
 7547682 7547683 GBP346_A2102 GBP346_A2103     FALSE 0.000 619.000 0.000 NA   NA
 7547685 7547686 GBP346_A2105 GBP346_A2106     FALSE 0.002 267.000 0.000 NA   NA
 7547686 7547687 GBP346_A2106 GBP346_A2107     FALSE 0.001 413.000 0.000 NA   NA
 7547687 7547688 GBP346_A2107 GBP346_A2108   cysC_1 FALSE 0.170 54.000 0.012 NA   NA
 7547690 7547691 GBP346_A2110 GBP346_A2111     TRUE 0.747 42.000 0.033 0.008   NA
 7547691 7547692 GBP346_A2111 GBP346_A2112     FALSE 0.405 120.000 0.025 1.000   NA
 7547692 7547693 GBP346_A2112 GBP346_A2113     TRUE 0.963 -3.000 0.667 0.048 N NA
 7547693 7547694 GBP346_A2113 GBP346_A2114     TRUE 0.675 35.000 0.190 1.000   NA
 7547694 7547695 GBP346_A2114 GBP346_A2115     TRUE 0.709 -3.000 0.190 NA   NA
 7547695 7547696 GBP346_A2115 GBP346_A2116     FALSE 0.401 132.000 0.222 NA   NA
 7547696 7547697 GBP346_A2116 GBP346_A2117     FALSE 0.453 111.000 0.167 NA   NA
 7547697 7547698 GBP346_A2117 GBP346_A2118     FALSE 0.539 18.000 0.027 1.000   NA
 7547698 7547699 GBP346_A2118 GBP346_A2119     FALSE 0.004 622.000 0.000 1.000   NA
 7547699 7547700 GBP346_A2119 GBP346_A2120     FALSE 0.241 197.000 0.750 NA   NA
 7547700 7547701 GBP346_A2120 GBP346_A2121     FALSE 0.001 417.000 0.000 NA   NA
 7547701 7547702 GBP346_A2121 GBP346_A2122     TRUE 0.617 125.000 0.667 NA   NA
 7547702 7547703 GBP346_A2122 GBP346_A2123     TRUE 0.837 99.000 0.500 1.000 N NA
 7547703 7547704 GBP346_A2123 GBP346_A2124     TRUE 0.832 22.000 0.267 1.000 N NA
 7547704 7547705 GBP346_A2124 GBP346_A2125     TRUE 0.803 -34.000 0.250 1.000 N NA
 7547705 7547706 GBP346_A2125 GBP346_A2126     TRUE 0.980 17.000 0.815 0.046 Y NA
 7547706 7547707 GBP346_A2126 GBP346_A2127     TRUE 0.990 2.000 0.852 0.046 Y NA
 7547707 7547708 GBP346_A2127 GBP346_A2128     TRUE 0.958 79.000 0.261 0.046 Y NA
 7547708 7547709 GBP346_A2128 GBP346_A2129     FALSE 0.583 70.000 0.286 NA   NA
 7547709 7547710 GBP346_A2129 GBP346_A2130     TRUE 0.606 70.000 0.333 NA   NA
 7547710 7547711 GBP346_A2130 GBP346_A2131     TRUE 0.931 44.000 0.548 NA Y NA
 7547711 7547712 GBP346_A2131 GBP346_A2132     FALSE 0.414 109.000 0.129 NA   NA
 7547712 7547713 GBP346_A2132 GBP346_A2133     TRUE 0.674 -7.000 0.109 1.000   NA
 7547713 7547714 GBP346_A2133 GBP346_A2134     TRUE 0.729 -10.000 0.582 NA   NA
 7547714 7547715 GBP346_A2134 GBP346_A2135     FALSE 0.002 297.000 0.000 NA   NA
 7547716 7547717 GBP346_A2136 GBP346_A2137     TRUE 0.704 109.000 1.000 NA   NA
 7547718 7547719 GBP346_A2138 GBP346_A2139     FALSE 0.048 91.000 0.000 NA   NA
 7547720 7547721 GBP346_A2140 GBP346_A2141     FALSE 0.002 290.000 0.000 NA   NA
 7547721 7547722 GBP346_A2141 GBP346_A2142     FALSE 0.005 215.000 0.000 NA   NA
 7547725 7547726 GBP346_A2145 GBP346_A2146     FALSE 0.082 13.000 0.000 NA   NA
 7547726 7547727 GBP346_A2146 GBP346_A2147     TRUE 0.656 73.000 0.500 NA   NA
 7547727 7547728 GBP346_A2147 GBP346_A2148     FALSE 0.094 327.000 0.000 NA Y NA
 7547728 7547729 GBP346_A2148 GBP346_A2149     TRUE 0.988 0.000 0.444 0.010 Y NA
 7547729 7547730 GBP346_A2149 GBP346_A2150     FALSE 0.002 302.000 0.000 NA   NA
 7547730 7547731 GBP346_A2150 GBP346_A2151     TRUE 0.825 6.000 0.500 NA   NA
 7547733 7547734 GBP346_A2152 GBP346_A2154     FALSE 0.002 279.000 0.000 NA   NA
 7547734 7547735 GBP346_A2154 GBP346_A2155     FALSE 0.005 213.000 0.000 NA   NA
 7547737 7547738 GBP346_A2157 GBP346_A2158   fimD TRUE 0.951 -9.000 0.308 1.000 Y NA
 7547738 7547739 GBP346_A2158 GBP346_A2159 fimD   TRUE 0.979 7.000 0.750 1.000 Y NA
 7547739 7547740 GBP346_A2159 GBP346_A2160     TRUE 0.959 22.000 0.750 1.000 Y NA
 7547743 7547744 GBP346_A2163 GBP346_A2164     TRUE 0.692 -33.000 0.667 NA   NA
 7547744 7547745 GBP346_A2164 GBP346_A2165     FALSE 0.129 199.000 0.222 NA   NA
 7547746 7547747 GBP346_A2166 GBP346_A2167     TRUE 0.865 -3.000 1.000 NA   NA
 7547747 7547748 GBP346_A2167 GBP346_A2168     FALSE 0.000 630.000 0.000 NA   NA
 7547748 7547749 GBP346_A2168 GBP346_A2169     TRUE 0.839 -3.000 0.000 0.006   NA
 7547749 7547750 GBP346_A2169 GBP346_A2170     FALSE 0.002 293.000 0.000 NA   NA
 7547751 7547752 GBP346_A2171 GBP346_A2173     FALSE 0.552 129.000 0.500 NA   NA
 7547754 7547755 GBP346_A2174 GBP346_A2175     TRUE 0.819 86.000 0.333 1.000 N NA
 7547755 7547756 GBP346_A2175 GBP346_A2176     TRUE 0.819 7.000 0.500 NA   NA
 7547756 7547757 GBP346_A2176 GBP346_A2177     TRUE 0.840 0.000 0.500 NA   NA
 7547758 7547759 GBP346_A2178 GBP346_A2179     FALSE 0.005 215.000 0.000 NA   NA
 7547759 7547760 GBP346_A2179 GBP346_A2180     TRUE 0.651 121.000 0.750 NA   NA
 7547760 7547761 GBP346_A2180 GBP346_A2181     FALSE 0.456 175.000 0.043 0.079 N NA
 7547761 7547762 GBP346_A2181 GBP346_A2182     TRUE 0.971 -3.000 0.057 0.079 Y NA
 7547762 7547763 GBP346_A2182 GBP346_A2183     TRUE 0.780 21.000 0.111 1.000 N NA
 7547764 7547765 GBP346_A2184 GBP346_A2185   nosZ FALSE 0.008 276.000 0.012 NA   NA
 7547765 7547766 GBP346_A2185 GBP346_A2186 nosZ nosD FALSE 0.422 196.000 0.029 0.003 N NA
 7547766 7547767 GBP346_A2186 GBP346_A2187 nosD nosF TRUE 0.889 -18.000 0.941 1.000 N NA
 7547767 7547768 GBP346_A2187 GBP346_A2188 nosF   TRUE 0.865 -3.000 1.000 NA   NA
 7547768 7547769 GBP346_A2188 GBP346_A2189     TRUE 0.792 -3.000 0.375 NA   NA
 7547769 7547770 GBP346_A2189 GBP346_A2190     TRUE 0.813 11.000 0.667 NA   NA
 7547770 7547771 GBP346_A2190 GBP346_A2191     TRUE 0.875 3.000 0.889 NA   NA
 7547771 7547772 GBP346_A2191 GBP346_A2192     FALSE 0.566 22.000 0.211 NA   NA
 7547772 7547773 GBP346_A2192 GBP346_A2193   nosR TRUE 0.800 59.000 0.192 1.000 N NA
 7547773 7547774 GBP346_A2193 GBP346_A2194 nosR   FALSE 0.565 -3.000 0.077 NA   NA
 7547774 7547775 GBP346_A2194 GBP346_A2196     FALSE 0.183 72.000 0.018 NA   NA
 7547777 7547778 GBP346_A2198 GBP346_A2199     TRUE 0.744 62.000 1.000 NA   NA
 7547778 7547779 GBP346_A2199 GBP346_A2200     TRUE 0.818 -3.000 0.500 NA   NA
 7547780 7547781 GBP346_A2201 GBP346_A2202     TRUE 0.685 9.000 0.182 NA   NA
 7547782 7547783 GBP346_A2203 GBP346_A2204     FALSE 0.400 67.000 0.095 NA   NA
 7547785 7547786 GBP346_A2206 GBP346_A2207     FALSE 0.596 -3.000 0.092 NA   NA
 7547787 7547788 GBP346_A2208 GBP346_A2209 lys   FALSE 0.247 79.000 0.040 NA   NA
 7547788 7547789 GBP346_A2209 GBP346_A2210     FALSE 0.047 94.000 0.000 NA   NA
 7547791 7547792 GBP346_A2211 GBP346_A2213     FALSE 0.497 -3.000 0.054 NA   NA
 7547792 7547793 GBP346_A2213 GBP346_A2214     FALSE 0.503 55.000 0.162 NA   NA
 7547793 7547794 GBP346_A2214 GBP346_A2215     FALSE 0.023 139.000 0.000 NA   NA
 7547794 7547795 GBP346_A2215 GBP346_A2216     FALSE 0.107 -3.000 0.000 NA   NA
 7547795 7547796 GBP346_A2216 GBP346_A2217     TRUE 0.717 -40.000 1.000 NA   NA
 7547800 7547801 GBP346_A2221 GBP346_A2222     FALSE 0.601 -27.000 0.312 NA   NA
 7547801 7547802 GBP346_A2222 GBP346_A2223     FALSE 0.584 58.000 0.260 NA   NA
 7547802 7547803 GBP346_A2223 GBP346_A2224     FALSE 0.012 619.000 0.000 1.000 N NA
 7547803 7547804 GBP346_A2224 GBP346_A2225     TRUE 0.914 5.000 0.235 1.000 N NA
 7547804 7547805 GBP346_A2225 GBP346_A2226     TRUE 0.928 85.000 0.238 1.000 Y NA
 7547805 7547806 GBP346_A2226 GBP346_A2227     TRUE 0.925 84.000 0.571 NA Y NA
 7547806 7547807 GBP346_A2227 GBP346_A2228     FALSE 0.253 116.000 0.053 NA   NA
 7547810 7547811 GBP346_A2231 GBP346_A2232     FALSE 0.328 110.000 0.079 NA   NA
 7547813 7547814 GBP346_A2234 GBP346_A2235     TRUE 0.886 -3.000 0.400 NA N NA
 7547814 7547815 GBP346_A2235 GBP346_A2236     TRUE 0.918 3.000 0.667 NA N NA
 7547818 7547819 GBP346_A2239 GBP346_A2240     TRUE 0.692 -6.000 0.333 NA   NA
 7547819 7547820 GBP346_A2240 GBP346_A2241     FALSE 0.416 22.000 0.091 NA   NA
 7547820 7547821 GBP346_A2241 GBP346_A2242     TRUE 0.782 11.000 0.491 NA   NA
 7547821 7547822 GBP346_A2242 GBP346_A2243     FALSE 0.012 313.000 0.058 NA   NA
 7547823 7547824 GBP346_A2244 GBP346_A2245     FALSE 0.561 51.000 0.230 NA   NA
 7547824 7547825 GBP346_A2245 GBP346_A2246     FALSE 0.541 40.000 0.203 NA   NA
 7547826 7547827 GBP346_A2247 GBP346_A2248     TRUE 0.988 -3.000 0.938 0.045 Y NA
 7547827 7547828 GBP346_A2248 GBP346_A2249   potG TRUE 0.950 63.000 0.533 1.000 Y NA
 7547828 7547829 GBP346_A2249 GBP346_A2250 potG potF_2 TRUE 0.943 91.000 0.474 1.000 Y NA
 7547830 7547831 GBP346_A2251 GBP346_A2252     TRUE 0.817 5.000 0.429 NA   NA
 7547831 7547832 GBP346_A2252 GBP346_A2253     FALSE 0.087 152.000 0.031 NA   NA
 7547833 7547834 GBP346_A2254 GBP346_A2255     FALSE 0.363 133.000 0.050 1.000   NA
 7547834 7547835 GBP346_A2255 GBP346_A2256     FALSE 0.219 199.000 0.014 0.028   NA
 7547837 7547838 GBP346_A2258 GBP346_A2259     FALSE 0.003 251.000 0.000 NA   NA
 7547839 7547840 GBP346_A2260 GBP346_A2261     FALSE 0.573 -3.000 0.081 NA   NA
 7547840 7547841 GBP346_A2261 GBP346_A2262     FALSE 0.001 313.000 0.000 NA   NA
 7547842 7547843 GBP346_A2263 GBP346_A2264     FALSE 0.002 293.000 0.000 NA   NA
 7547845 7547846 GBP346_A2266 GBP346_A2267 metC   FALSE 0.068 265.000 0.348 NA   NA
 7547846 7547847 GBP346_A2267 GBP346_A2268     TRUE 0.745 17.000 0.550 NA   NA
 7547847 7547848 GBP346_A2268 GBP346_A2269     TRUE 0.896 -3.000 0.500 NA N NA
 7547848 7547849 GBP346_A2269 GBP346_A2270     TRUE 0.752 3.000 0.026 NA N NA
 7547849 7547850 GBP346_A2270 GBP346_A2271   phaR FALSE 0.002 584.000 0.030 NA   NA
 7547850 7547851 GBP346_A2271 GBP346_A2272 phaR phbB FALSE 0.279 137.000 0.130 NA   NA
 7547851 7547852 GBP346_A2272 GBP346_A2273 phbB   TRUE 0.923 126.000 0.491 1.000 Y NA
 7547852 7547853 GBP346_A2273 GBP346_A2274   phbC_1 TRUE 0.939 97.000 0.420 1.000 Y NA
 7547853 7547854 GBP346_A2274 GBP346_A2275 phbC_1   FALSE 0.001 529.000 0.006 NA   NA
 7547854 7547855 GBP346_A2275 GBP346_A2276     TRUE 0.697 7.000 0.168 NA   NA
 7547857 7547858 GBP346_A2278 GBP346_A2279     FALSE 0.233 63.000 0.028 NA   NA
 7547858 7547859 GBP346_A2279 GBP346_A2280     FALSE 0.332 109.000 0.081 NA   NA
 7547859 7547860 GBP346_A2280 GBP346_A2281     TRUE 0.617 11.000 0.133 NA   NA
 7547864 7547865 GBP346_A2285 GBP346_A2286   purA TRUE 0.699 7.000 0.042 1.000   NA
 7547865 7547866 GBP346_A2286 GBP346_A2287 purA hisZ TRUE 0.714 125.000 0.161 1.000 N NA
 7547866 7547867 GBP346_A2287 GBP346_A2288 hisZ   FALSE 0.389 112.000 0.117 NA   NA
 7547867 7547868 GBP346_A2288 GBP346_A2289   hflC TRUE 0.638 25.000 0.348 NA   NA
 7547868 7547869 GBP346_A2289 GBP346_A2290 hflC   TRUE 0.983 17.000 0.947 0.009 Y NA
 7547869 7547870 GBP346_A2290 GBP346_A2291   hflX TRUE 0.805 46.000 0.184 0.047   NA
 7547870 7547871 GBP346_A2291 GBP346_A2292 hflX hfq FALSE 0.527 72.000 0.058 1.000   NA
 7547871 7547872 GBP346_A2292 GBP346_A2293 hfq engA FALSE 0.328 135.000 0.036 1.000   NA
 7547874 7547875 GBP346_A2295 GBP346_A2296 yfgL   TRUE 0.662 45.000 0.492 NA   NA
 7547875 7547876 GBP346_A2296 GBP346_A2297   hisS FALSE 0.580 53.000 0.259 NA   NA
 7547876 7547877 GBP346_A2297 GBP346_A2298 hisS ispG TRUE 0.830 19.000 0.207 1.000 N NA
 7547877 7547878 GBP346_A2298 GBP346_A2299 ispG   FALSE 0.472 144.000 0.233 1.000   NA
 7547878 7547879 GBP346_A2299 GBP346_A2300     FALSE 0.066 220.000 0.020 1.000   NA
 7547879 7547880 GBP346_A2300 GBP346_A2301     TRUE 0.653 42.000 0.156 1.000   NA
 7547884 7547885 GBP346_A2305 GBP346_A2306   rpoS TRUE 0.868 8.000 0.101 1.000 N NA
 7547885 7547886 GBP346_A2306 GBP346_A2307 rpoS   TRUE 0.841 12.000 0.101 1.000 N NA
 7547886 7547887 GBP346_A2307 GBP346_A2308     TRUE 0.791 12.000 0.028 1.000 N NA
 7547887 7547888 GBP346_A2308 GBP346_A2309   surE TRUE 0.862 -3.000 0.353 1.000   NA
 7547890 7547891 GBP346_A2310 GBP346_A2312   recR TRUE 0.666 70.000 0.018 1.000 N NA
 7547891 7547892 GBP346_A2312 GBP346_A2313 recR   TRUE 0.704 32.000 0.604 NA   NA
 7547892 7547893 GBP346_A2313 GBP346_A2314     TRUE 0.618 95.000 0.411 NA   NA
 7547893 7547894 GBP346_A2314 GBP346_A2315     FALSE 0.265 -3.000 0.006 NA   NA
 7547894 7547895 GBP346_A2315 GBP346_A2316   srpB FALSE 0.119 4.000 0.000 NA   NA
 7547896 7547897 GBP346_A2317 GBP346_A2318 trxA   FALSE 0.282 7.000 0.008 NA   NA
 7547897 7547898 GBP346_A2318 GBP346_A2319   rho FALSE 0.134 64.000 0.005 NA   NA
 7547898 7547899 GBP346_A2319 GBP346_A2320 rho   TRUE 0.621 170.000 0.012 1.000 Y NA
 7547899 7547900 GBP346_A2320 GBP346_A2321     TRUE 0.872 -3.000 0.438 1.000   NA
 7547900 7547901 GBP346_A2321 GBP346_A2322     FALSE 0.354 43.000 0.071 NA   NA
 7547901 7547902 GBP346_A2322 GBP346_A2323   rpmE FALSE 0.023 215.000 0.022 NA   NA
 7547902 7547903 GBP346_A2323 GBP346_A2324 rpmE   FALSE 0.318 153.000 0.067 NA N NA
 7547903 7547904 GBP346_A2324 GBP346_A2325     TRUE 0.848 4.000 0.154 NA N NA
 7547904 7547905 GBP346_A2325 GBP346_A2326     FALSE 0.053 152.000 0.009 NA   NA
 7547906 7547907 GBP346_A2327 GBP346_A2328     FALSE 0.533 72.000 0.211 NA   NA
 7547908 7547909 GBP346_A2329 GBP346_A2330     TRUE 0.666 79.000 0.571 NA   NA
 7547910 7547911 GBP346_A2331 GBP346_A2332 clpB   FALSE 0.125 94.000 0.005 NA   NA
 7547911 7547912 GBP346_A2332 GBP346_A2333     FALSE 0.592 -3.000 0.091 NA   NA
 7547914 7547915 GBP346_A2335 GBP346_A2336 moaE moaD TRUE 0.986 11.000 0.501 0.003 Y NA
 7547915 7547916 GBP346_A2336 GBP346_A2337 moaD moeA TRUE 0.960 22.000 0.095 0.003 Y NA
 7547916 7547917 GBP346_A2337 GBP346_A2338 moeA   FALSE 0.228 -24.000 0.027 NA   NA
 7547917 7547918 GBP346_A2338 GBP346_A2339   thrC FALSE 0.230 10.000 0.005 NA   NA
 7547918 7547919 GBP346_A2339 GBP346_A2340 thrC   TRUE 0.961 8.000 0.125 1.000 Y NA
 7547919 7547920 GBP346_A2340 GBP346_A2341     TRUE 0.915 45.000 0.102 1.000 Y NA
 7547921 7547922 GBP346_A2342 GBP346_A2343     FALSE 0.095 169.000 0.060 NA   NA
 7547922 7547923 GBP346_A2343 GBP346_A2344     TRUE 0.809 21.000 0.667 1.000   NA
 7547923 7547924 GBP346_A2344 GBP346_A2345     TRUE 0.693 127.000 0.545 1.000   NA
 7547924 7547925 GBP346_A2345 GBP346_A2346     TRUE 0.962 7.000 0.351 NA Y NA
 7547925 7547926 GBP346_A2346 GBP346_A2347   arnA_1 TRUE 0.893 -3.000 0.473 NA N NA
 7547926 7547927 GBP346_A2347 GBP346_A2348 arnA_1 arnA_2 TRUE 0.904 -3.000 0.227 1.000 N NA
 7547927 7547928 GBP346_A2348 GBP346_A2349 arnA_2   TRUE 0.965 14.000 0.447 1.000 Y NA
 7547928 7547929 GBP346_A2349 GBP346_A2350     TRUE 0.664 90.000 0.023 1.000 N NA
 7547931 7547932 GBP346_A2352 GBP346_A2353     FALSE 0.117 5.000 0.000 NA   NA
 7547932 7547933 GBP346_A2353 GBP346_A2354     FALSE 0.051 46.000 0.000 NA   NA
 7547933 7547934 GBP346_A2354 GBP346_A2355     FALSE 0.570 -3.000 0.080 NA   NA
 7547935 7547936 GBP346_A2356 GBP346_A2357     TRUE 0.956 11.000 0.396 NA Y NA
 7547936 7547937 GBP346_A2357 GBP346_A2358   dnaB FALSE 0.422 139.000 0.085 NA N NA
 7547937 7547938 GBP346_A2358 GBP346_A2359 dnaB   FALSE 0.352 10.000 0.025 NA   NA
 7547938 7547939 GBP346_A2359 GBP346_A2360   rplI FALSE 0.276 6.000 0.006 NA   NA
 7547939 7547940 GBP346_A2360 GBP346_A2361 rplI rpsR TRUE 0.972 28.000 0.499 0.011 Y NA
 7547940 7547941 GBP346_A2361 GBP346_A2362 rpsR   TRUE 0.840 3.000 0.128 NA N NA
 7547941 7547942 GBP346_A2362 GBP346_A2363   rpsF TRUE 0.670 37.000 0.122 NA N NA
 7547942 7547943 GBP346_A2363 GBP346_A2364 rpsF   FALSE 0.061 236.000 0.002 NA N NA
 7547943 7547944 GBP346_A2364 GBP346_A2365     TRUE 0.946 -10.000 0.659 NA Y NA
 7547945 7547946 GBP346_A2366 GBP346_A2367     FALSE 0.370 63.000 0.077 NA   NA
 7547946 7547947 GBP346_A2367 GBP346_A2368     TRUE 0.797 11.000 0.205 1.000   NA
 7547949 7547950 GBP346_A2370 GBP346_A2371 gcl hyi TRUE 0.714 117.000 0.495 1.000   NA
 7547950 7547951 GBP346_A2371 GBP346_A2372 hyi   TRUE 0.835 98.000 0.492 1.000 N NA
 7547951 7547952 GBP346_A2372 GBP346_A2373     FALSE 0.391 82.000 0.103 NA   NA
 7547952 7547953 GBP346_A2373 GBP346_A2375     FALSE 0.389 13.000 0.045 NA   NA
 7547954 7547955 GBP346_A2374 GBP346_A2376     FALSE 0.429 -3.000 0.036 NA   NA
 7547956 7547957 GBP346_A2377 GBP346_A2378     FALSE 0.536 -3.000 0.067 NA   NA
 7547957 7547958 GBP346_A2378 GBP346_A2380     FALSE 0.006 207.000 0.000 NA   NA
 7547961 7547962 GBP346_A2382 GBP346_A2383     FALSE 0.001 377.000 0.000 NA   NA
 7547962 7547963 GBP346_A2383 GBP346_A2384     FALSE 0.023 253.000 0.058 NA   NA
 7547963 7547964 GBP346_A2384 GBP346_A2385     FALSE 0.383 67.000 0.088 NA   NA
 7547964 7547965 GBP346_A2385 GBP346_A2386     FALSE 0.510 74.000 0.194 NA   NA
 7547965 7547966 GBP346_A2386 GBP346_A2387     FALSE 0.419 11.000 0.046 NA   NA
 7547966 7547967 GBP346_A2387 GBP346_A2388     FALSE 0.504 76.000 0.015 NA N NA
 7547967 7547968 GBP346_A2388 GBP346_A2389     TRUE 0.683 43.000 0.024 1.000 N NA
 7547968 7547969 GBP346_A2389 GBP346_A2390   tmk TRUE 0.826 20.000 0.211 1.000 N NA
 7547969 7547970 GBP346_A2390 GBP346_A2391 tmk   TRUE 0.754 1.000 0.209 NA   NA
 7547971 7547972 GBP346_A2392 GBP346_A2393     FALSE 0.233 71.000 0.032 NA   NA
 7547973 7547974 GBP346_A2394 GBP346_A2395     FALSE 0.056 372.000 0.147 0.050   NA
 7547974 7547975 GBP346_A2395 GBP346_A2396     TRUE 0.682 106.000 0.294 1.000   NA
 7547975 7547976 GBP346_A2396 GBP346_A2397     TRUE 0.693 92.000 0.694 NA   NA
 7547976 7547977 GBP346_A2397 GBP346_A2398     FALSE 0.504 -3.000 0.057 NA   NA
 7547977 7547978 GBP346_A2398 GBP346_A2399     FALSE 0.001 407.000 0.000 NA   NA
 7547980 7547981 GBP346_A2401 GBP346_A2402     TRUE 0.699 59.000 0.034 1.000 N NA
 7547981 7547982 GBP346_A2402 GBP346_A2403     TRUE 0.695 42.000 0.034 1.000 N NA
 7547982 7547983 GBP346_A2403 GBP346_A2404     FALSE 0.384 56.000 0.083 NA   NA
 7547983 7547984 GBP346_A2404 GBP346_A2405     FALSE 0.452 77.000 0.136 NA   NA
 7547985 7547986 GBP346_A2406 GBP346_A2407   msrB FALSE 0.601 -3.000 0.095 NA   NA
 7547986 7547987 GBP346_A2407 GBP346_A2408 msrB ispZ TRUE 0.761 93.000 0.136 1.000 N NA
 7547987 7547988 GBP346_A2408 GBP346_A2409 ispZ   TRUE 0.824 -3.000 0.133 NA N NA
 7547988 7547989 GBP346_A2409 GBP346_A2410     TRUE 0.710 25.000 0.162 NA N NA
 7547990 7547991 GBP346_A2411 GBP346_A2412   purL TRUE 0.659 5.000 0.011 1.000   NA
 7547991 7547992 GBP346_A2412 GBP346_A2413 purL   FALSE 0.038 171.000 0.011 NA   NA
 7547993 7547994 GBP346_A2414 GBP346_A2416     TRUE 0.852 48.000 0.022 0.002 N NA
 7547999 7548000 GBP346_A2420 GBP346_A2421     FALSE 0.041 177.000 0.017 NA   NA
 7548000 7548001 GBP346_A2421 GBP346_A2422     FALSE 0.047 87.000 0.000 NA   NA
 7548001 7548002 GBP346_A2422 GBP346_A2423     FALSE 0.000 568.000 0.000 NA   NA
 7548002 7548003 GBP346_A2423 GBP346_A2424     TRUE 0.865 3.000 0.750 NA   NA
 7548005 7548006 GBP346_A2426 GBP346_A2427     FALSE 0.386 4.000 0.021 NA   NA
 7548006 7548007 GBP346_A2427 GBP346_A2428     FALSE 0.401 130.000 0.200 NA   NA
 7548009 7548010 GBP346_A2430 GBP346_A2431     FALSE 0.051 64.000 0.000 NA   NA
 7548010 7548011 GBP346_A2431 GBP346_A2432     FALSE 0.543 130.000 0.500 NA   NA
 7548011 7548012 GBP346_A2432 GBP346_A2433   lon FALSE 0.124 81.000 0.005 NA   NA
 7548012 7548013 GBP346_A2433 GBP346_A2434 lon   FALSE 0.145 22.000 0.005 NA   NA
 7548013 7548014 GBP346_A2434 GBP346_A2435   clpX FALSE 0.239 7.000 0.002 NA   NA
 7548014 7548015 GBP346_A2435 GBP346_A2436 clpX clpP TRUE 0.810 161.000 0.352 1.000 Y NA
 7548015 7548016 GBP346_A2436 GBP346_A2437 clpP tig TRUE 0.888 135.000 0.351 1.000 Y NA
 7548017 7548018 GBP346_A2438 GBP346_A2439     FALSE 0.040 117.000 0.000 NA   NA
 7548018 7548019 GBP346_A2439 GBP346_A2440     TRUE 0.728 103.000 0.107 1.000 N NA
 7548020 7548021 GBP346_A2441 GBP346_A2442   panE_3 TRUE 0.789 -3.000 0.364 NA   NA
 7548021 7548022 GBP346_A2442 GBP346_A2443 panE_3   TRUE 0.815 84.000 0.320 1.000 N NA
 7548023 7548024 GBP346_A2444 GBP346_A2445     TRUE 0.793 24.000 0.429 NA N NA
 7548024 7548025 GBP346_A2445 GBP346_A2446     TRUE 0.725 57.000 0.208 NA N NA
 7548025 7548026 GBP346_A2446 GBP346_A2447     FALSE 0.087 195.000 0.104 NA   NA
 7548028 7548029 GBP346_A2449 GBP346_A2450     FALSE 0.558 61.000 0.222 NA   NA
 7548031 7548032 GBP346_A2452 GBP346_A2453     TRUE 0.865 -3.000 1.000 NA   NA
 7548032 7548033 GBP346_A2453 GBP346_A2454     FALSE 0.068 17.000 0.000 NA   NA
 7548033 7548034 GBP346_A2454 GBP346_A2455     FALSE 0.001 332.000 0.000 NA   NA
 7548034 7548035 GBP346_A2455 GBP346_A2456     TRUE 0.793 7.000 0.375 NA   NA
 7548036 7548037 GBP346_A2457 GBP346_A2458     FALSE 0.051 47.000 0.000 NA   NA
 7548037 7548038 GBP346_A2458 GBP346_A2459     FALSE 0.006 201.000 0.000 NA   NA
 7548040 7548041 GBP346_A2461 GBP346_A2462     TRUE 0.637 62.000 0.389 NA   NA
 7548041 7548042 GBP346_A2462 GBP346_A2463     FALSE 0.042 196.000 0.037 NA   NA
 7548042 7548043 GBP346_A2463 GBP346_A2464     TRUE 0.790 0.000 0.286 NA   NA
 7548044 7548045 GBP346_A2465 GBP346_A2466     TRUE 0.929 88.000 0.241 1.000 Y NA
 7548045 7548046 GBP346_A2466 GBP346_A2467     FALSE 0.206 199.000 0.027 1.000 N NA
 7548046 7548047 GBP346_A2467 GBP346_A2468     FALSE 0.298 78.000 0.058 NA   NA
 7548048 7548049 GBP346_A2469 GBP346_A2470 ispF ispD TRUE 0.945 41.000 0.419 1.000 Y NA
 7548052 7548053 GBP346_A2473 GBP346_A2474 argE   TRUE 0.946 62.000 0.441 1.000 Y NA
 7548056 7548057 GBP346_A2477 GBP346_A2478     FALSE 0.073 16.000 0.000 NA   NA
 7548057 7548058 GBP346_A2478 GBP346_A2479     FALSE 0.450 133.000 0.333 NA   NA
 7548059 7548060 GBP346_A2480 GBP346_A2481     FALSE 0.052 61.000 0.000 NA   NA
 7548060 7548061 GBP346_A2481 GBP346_A2482     FALSE 0.048 90.000 0.000 NA   NA
 7548061 7548062 GBP346_A2482 GBP346_A2483     FALSE 0.443 145.000 0.565 NA   NA
 7548062 7548063 GBP346_A2483 GBP346_A2484   mscL FALSE 0.111 184.000 0.012 1.000   NA
 7548063 7548064 GBP346_A2484 GBP346_A2485 mscL   FALSE 0.047 78.000 0.000 NA   NA
 7548064 7548065 GBP346_A2485 GBP346_A2486     FALSE 0.014 163.000 0.000 NA   NA
 7548070 7548071 GBP346_A2491 GBP346_A2492     FALSE 0.037 122.000 0.000 NA   NA
 7548072 7548073 GBP346_A2493 GBP346_A2494   uraH FALSE 0.438 84.000 0.130 NA   NA
 7548073 7548074 GBP346_A2494 GBP346_A2495 uraH   TRUE 0.760 50.000 0.463 1.000   NA
 7548074 7548075 GBP346_A2495 GBP346_A2496     FALSE 0.052 58.000 0.000 NA   NA
 7548076 7548077 GBP346_A2497 GBP346_A2498 allA_1 allC TRUE 0.981 -3.000 0.895 1.000 Y NA
 7548077 7548078 GBP346_A2498 GBP346_A2499 allC uraD TRUE 0.658 88.000 0.522 NA   NA
 7548078 7548079 GBP346_A2499 GBP346_A2500 uraD   TRUE 0.671 -3.000 0.143 NA   NA
 7548079 7548080 GBP346_A2500 GBP346_A2501     FALSE 0.555 146.000 0.143 1.000 N NA
 7548080 7548081 GBP346_A2501 GBP346_A2502     TRUE 0.911 11.000 0.458 1.000 N NA
 7548083 7548084 GBP346_A2504 GBP346_A2505     FALSE 0.019 323.000 0.000 NA N NA
 7548084 7548085 GBP346_A2505 GBP346_A2506     TRUE 0.665 56.000 0.115 NA N NA
 7548085 7548086 GBP346_A2506 GBP346_A2507     FALSE 0.495 -3.000 0.053 NA   NA
 7548086 7548087 GBP346_A2507 GBP346_A2508     FALSE 0.001 325.000 0.000 NA   NA
 7548087 7548088 GBP346_A2508 GBP346_A2509     TRUE 0.867 2.000 0.750 NA   NA
 7548088 7548089 GBP346_A2509 GBP346_A2510     FALSE 0.353 72.000 0.075 NA   NA
 7548090 7548091 GBP346_A2511 GBP346_A2512     TRUE 0.742 9.000 0.273 NA   NA
 7548092 7548093 GBP346_A2513 GBP346_A2514     FALSE 0.001 432.000 0.000 NA   NA
 7548093 7548094 GBP346_A2514 GBP346_A2515     FALSE 0.000 546.000 0.000 NA   NA
 7548094 7548095 GBP346_A2515 GBP346_A2516     TRUE 0.832 3.000 0.007 0.076   NA
 7548095 7548096 GBP346_A2516 GBP346_A2517     FALSE 0.354 0.000 0.014 NA   NA
 7548096 7548097 GBP346_A2517 GBP346_A2519     TRUE 0.750 -16.000 0.900 NA   NA
 7548097 7548098 GBP346_A2519 GBP346_A2520     FALSE 0.502 112.000 0.222 NA   NA
 7548099 7548100 GBP346_A2521 GBP346_A2522     FALSE 0.042 -49.000 0.000 NA   NA
 7548100 7548101 GBP346_A2522 GBP346_A2523     FALSE 0.373 -22.000 0.077 NA   NA
 7548101 7548102 GBP346_A2523 GBP346_A2524     FALSE 0.459 16.000 0.077 NA   NA
 7548103 7548104 GBP346_A2525 GBP346_A2526     FALSE 0.145 -18.000 0.005 NA   NA
 7548104 7548105 GBP346_A2526 GBP346_A2527     TRUE 0.704 -3.000 0.182 NA   NA
 7548105 7548106 GBP346_A2527 GBP346_A2528   guaB FALSE 0.373 7.000 0.023 NA   NA
 7548106 7548107 GBP346_A2528 GBP346_A2529 guaB   FALSE 0.124 52.000 0.002 NA   NA
 7548107 7548108 GBP346_A2529 GBP346_A2530     FALSE 0.442 15.000 0.067 NA   NA
 7548109 7548110 GBP346_A2531 GBP346_A2532     FALSE 0.271 32.000 0.039 NA   NA
 7548110 7548111 GBP346_A2532 GBP346_A2533     FALSE 0.001 335.000 0.000 NA   NA
 7548112 7548113 GBP346_A2534 GBP346_A2535     FALSE 0.428 6.000 0.033 NA   NA
 7548114 7548115 GBP346_A2536 GBP346_A2537   smpB FALSE 0.145 -19.000 0.006 NA   NA
 7548116 7548117 GBP346_A2538 GBP346_A2539     TRUE 0.867 80.000 0.091 NA Y NA
 7548117 7548118 GBP346_A2539 GBP346_A2540   ppsA FALSE 0.467 128.000 0.048 NA N NA
 7548120 7548121 GBP346_A2542 GBP346_A2543     FALSE 0.542 33.000 0.200 NA   NA
 7548121 7548122 GBP346_A2543 GBP346_A2544     FALSE 0.001 404.000 0.000 NA   NA
 7548124 7548125 GBP346_A2546 GBP346_A2547   rnhB TRUE 0.920 -3.000 0.046 0.013 N NA
 7548125 7548126 GBP346_A2547 GBP346_A2548 rnhB lpxB TRUE 0.910 0.000 0.186 1.000 N NA
 7548126 7548127 GBP346_A2548 GBP346_A2549 lpxB lpxA TRUE 0.974 4.000 0.289 1.000 Y NA
 7548127 7548128 GBP346_A2549 GBP346_A2550 lpxA fabZ TRUE 0.882 56.000 0.850 1.000 N NA
 7548128 7548129 GBP346_A2550 GBP346_A2551 fabZ lpxD TRUE 0.716 146.000 0.796 1.000 N NA
 7548129 7548130 GBP346_A2551 GBP346_A2552 lpxD   TRUE 0.968 17.000 0.814 1.000 Y NA
 7548130 7548131 GBP346_A2552 GBP346_A2553   yaeT TRUE 0.942 65.000 0.354 1.000 Y NA
 7548133 7548134 GBP346_A2554 GBP346_A2556 rseP dxr TRUE 0.886 18.000 0.568 1.000 N NA
 7548134 7548135 GBP346_A2556 GBP346_A2557 dxr cdsA TRUE 0.962 15.000 0.372 1.000 Y NA
 7548135 7548136 GBP346_A2557 GBP346_A2558 cdsA uppS TRUE 0.960 -6.000 0.400 1.000 Y NA
 7548136 7548137 GBP346_A2558 GBP346_A2559 uppS frr TRUE 0.842 48.000 0.409 1.000 N NA
 7548137 7548138 GBP346_A2559 GBP346_A2560 frr pyrH TRUE 0.703 91.000 0.058 1.000 N NA
 7548138 7548139 GBP346_A2560 GBP346_A2561 pyrH tsf TRUE 0.718 32.000 0.047 1.000 N NA
 7548139 7548140 GBP346_A2561 GBP346_A2562 tsf rpsB TRUE 0.771 183.000 0.748 1.000 Y NA
 7548141 7548142 GBP346_A2563 GBP346_A2564   map_1 FALSE 0.295 44.000 0.050 NA   NA
 7548142 7548143 GBP346_A2564 GBP346_A2565 map_1 glnD TRUE 0.627 166.000 0.817 1.000 N NA
 7548143 7548144 GBP346_A2565 GBP346_A2566 glnD   TRUE 0.869 15.000 0.237 1.000 N NA
 7548145 7548146 GBP346_A2567 GBP346_A2568 def_2 ligA TRUE 0.828 -3.000 0.025 1.000 N NA
 7548148 7548149 GBP346_A2569 GBP346_A2571   smc TRUE 0.690 82.000 0.006 0.009   NA
 7548149 7548150 GBP346_A2571 GBP346_A2572 smc   FALSE 0.412 149.000 0.016 1.000 N NA
 7548151 7548152 GBP346_A2573 GBP346_A2574 dapC dapD TRUE 0.925 57.000 0.149 1.000 Y NA
 7548152 7548153 GBP346_A2574 GBP346_A2575 dapD   TRUE 0.872 0.000 0.061 1.000 N NA
 7548153 7548154 GBP346_A2575 GBP346_A2576   dapE TRUE 0.815 74.000 0.292 1.000 N NA
 7548154 7548155 GBP346_A2576 GBP346_A2577 dapE prmB TRUE 0.837 14.000 0.115 1.000 N NA
 7548155 7548156 GBP346_A2577 GBP346_A2578 prmB   FALSE 0.070 288.000 0.028 1.000 N NA
 7548159 7548160 GBP346_A2581 GBP346_A2582   radA FALSE 0.052 164.000 0.015 NA   NA
 7548160 7548161 GBP346_A2582 GBP346_A2583 radA alr_1 TRUE 0.797 11.000 0.023 1.000 N NA
 7548162 7548163 GBP346_A2584 GBP346_A2585   thiD_1 FALSE 0.579 111.000 0.366 NA   NA
 7548163 7548164 GBP346_A2585 GBP346_A2586 thiD_1   FALSE 0.296 58.000 0.049 NA   NA
 7548165 7548166 GBP346_A2587 GBP346_A2588     FALSE 0.531 -3.000 0.064 NA   NA
 7548166 7548167 GBP346_A2588 GBP346_A2589   rimI TRUE 0.624 -13.000 0.096 1.000   NA
 7548167 7548168 GBP346_A2589 GBP346_A2590 rimI   TRUE 0.828 -3.000 0.209 1.000   NA
 7548169 7548170 GBP346_A2591 GBP346_A2592     FALSE 0.002 288.000 0.000 NA   NA
 7548170 7548171 GBP346_A2592 GBP346_A2593     FALSE 0.425 2.000 0.027 NA   NA
 7548171 7548172 GBP346_A2593 GBP346_A2594   aceA FALSE 0.475 132.000 0.000 1.000 N NA
 7548176 7548177 GBP346_A2598 GBP346_A2599 dehII aceB TRUE 0.626 53.000 0.123 1.000   NA
 7548178 7548179 GBP346_A2600 GBP346_A2601     FALSE 0.578 -3.000 0.084 NA   NA
 7548181 7548182 GBP346_A2603 GBP346_A2604     FALSE 0.014 160.000 0.000 NA   NA
 7548182 7548183 GBP346_A2604 GBP346_A2605     FALSE 0.047 80.000 0.000 NA   NA
 7548183 7548184 GBP346_A2605 GBP346_A2606     FALSE 0.052 63.000 0.000 NA   NA
 7548184 7548185 GBP346_A2606 GBP346_A2607     FALSE 0.048 76.000 0.000 NA   NA
 7548185 7548186 GBP346_A2607 GBP346_A2608     FALSE 0.017 150.000 0.000 NA   NA
 7548186 7548187 GBP346_A2608 GBP346_A2609   gltX FALSE 0.011 171.000 0.000 NA   NA
 7548189 7548190 GBP346_A2611 GBP346_A2612     FALSE 0.270 27.000 0.038 NA   NA
 7548190 7548191 GBP346_A2612 GBP346_A2613     FALSE 0.176 136.000 0.057 NA   NA
 7548191 7548192 GBP346_A2613 GBP346_A2614     TRUE 0.811 -3.000 0.167 1.000   NA
 7548192 7548193 GBP346_A2614 GBP346_A2615     TRUE 0.943 2.000 0.519 0.043   NA
 7548193 7548194 GBP346_A2615 GBP346_A2616     FALSE 0.531 189.000 0.815 0.043   NA
 7548200 7548201 GBP346_A2622 GBP346_A2623 fpr_2   TRUE 0.669 8.000 0.028 1.000   NA
 7548201 7548202 GBP346_A2623 GBP346_A2624     FALSE 0.012 721.000 0.167 1.000   NA
 7548204 7548205 GBP346_A2626 GBP346_A2627 map_2   TRUE 0.823 0.000 0.410 NA   NA
 7548205 7548206 GBP346_A2627 GBP346_A2628     FALSE 0.047 80.000 0.000 NA   NA
 7548206 7548207 GBP346_A2628 GBP346_A2629     FALSE 0.099 9.000 0.000 NA   NA
 7548207 7548208 GBP346_A2629 GBP346_A2630     TRUE 0.874 80.000 0.007 1.000 Y NA
 7548208 7548209 GBP346_A2630 GBP346_A2631     TRUE 0.932 5.000 0.462 1.000 N NA
 7548209 7548210 GBP346_A2631 GBP346_A2632     TRUE 0.733 23.000 0.057 1.000 N NA
 7548210 7548211 GBP346_A2632 GBP346_A2633     FALSE 0.050 216.000 0.000 1.000   NA
 7548211 7548212 GBP346_A2633 GBP346_A2634     FALSE 0.416 91.000 0.008 1.000   NA
 7548212 7548213 GBP346_A2634 GBP346_A2635     TRUE 0.664 41.000 0.010 1.000 N NA
 7548213 7548214 GBP346_A2635 GBP346_A2636     FALSE 0.560 52.000 0.227 NA   NA
 7548214 7548215 GBP346_A2636 GBP346_A2637     TRUE 0.833 -3.000 0.600 NA   NA
 7548215 7548216 GBP346_A2637 GBP346_A2638     TRUE 0.981 -3.000 0.087 0.001 Y NA
 7548216 7548217 GBP346_A2638 GBP346_A2639     FALSE 0.420 20.000 0.087 NA   NA
 7548217 7548218 GBP346_A2639 GBP346_A2640     TRUE 0.770 -6.000 0.667 NA   NA
 7548218 7548219 GBP346_A2640 GBP346_A2641     FALSE 0.206 20.000 0.016 NA   NA
 7548219 7548220 GBP346_A2641 GBP346_A2642     FALSE 0.179 70.000 0.016 NA   NA
 7548220 7548221 GBP346_A2642 GBP346_A2643     TRUE 0.822 5.000 0.455 NA   NA
 7548221 7548222 GBP346_A2643 GBP346_A2644     TRUE 0.769 -3.000 0.300 NA   NA
 7548222 7548223 GBP346_A2644 GBP346_A2645     TRUE 0.724 84.000 0.375 1.000   NA
 7548223 7548224 GBP346_A2645 GBP346_A2646     FALSE 0.475 125.000 0.250 NA   NA
 7548224 7548225 GBP346_A2646 GBP346_A2647     FALSE 0.107 -3.000 0.000 NA   NA
 7548225 7548226 GBP346_A2647 GBP346_A2648     TRUE 0.812 68.000 0.667 NA N NA
 7548226 7548227 GBP346_A2648 GBP346_A2649     TRUE 0.823 -12.000 0.200 1.000 N NA
 7548230 7548231 GBP346_A2652 GBP346_A2653     FALSE 0.001 333.000 0.000 NA   NA
 7548231 7548232 GBP346_A2653 GBP346_A2654     FALSE 0.593 94.000 0.333 NA   NA
 7548232 7548233 GBP346_A2654 GBP346_A2655     TRUE 0.871 -3.000 0.292 NA N NA
 7548233 7548234 GBP346_A2655 GBP346_A2656     FALSE 0.370 78.000 0.088 NA   NA
 7548235 7548236 GBP346_A2657 GBP346_A2658     FALSE 0.006 202.000 0.000 NA   NA
 7548236 7548237 GBP346_A2658 GBP346_A2659     FALSE 0.001 311.000 0.000 NA   NA
 7548237 7548238 GBP346_A2659 GBP346_A2660     FALSE 0.000 528.000 0.000 NA   NA
 7548238 7548239 GBP346_A2660 GBP346_A2661     FALSE 0.041 114.000 0.000 NA   NA
 7548241 7548242 GBP346_A2663 GBP346_A2664   accA TRUE 0.769 44.000 0.123 1.000 N NA
 7548242 7548243 GBP346_A2664 GBP346_A2665 accA   TRUE 0.685 104.000 0.059 1.000 N NA
 7548243 7548244 GBP346_A2665 GBP346_A2666   cysS TRUE 0.695 48.000 0.036 1.000 N NA
 7548245 7548246 GBP346_A2667 GBP346_A2668     TRUE 0.618 57.000 0.113 1.000   NA
 7548246 7548247 GBP346_A2668 GBP346_A2669     TRUE 0.974 81.000 0.577 0.002 Y NA
 7548247 7548248 GBP346_A2669 GBP346_A2670   lpxH TRUE 0.652 25.000 0.136 1.000   NA
 7548248 7548249 GBP346_A2670 GBP346_A2671 lpxH   FALSE 0.257 -3.000 0.005 NA   NA
 7548250 7548251 GBP346_A2672 GBP346_A2673     FALSE 0.363 191.000 0.208 1.000 N NA
 7548259 7548260 GBP346_A2681 GBP346_A2682     FALSE 0.089 186.000 0.091 NA   NA
 7548261 7548262 GBP346_A2683 GBP346_A2684     FALSE 0.011 170.000 0.000 NA   NA
 7548262 7548263 GBP346_A2684 GBP346_A2685     FALSE 0.000 837.000 0.000 NA   NA
 7548263 7548264 GBP346_A2685 GBP346_A2686     FALSE 0.000 1238.000 0.000 NA   NA
 7548264 7548265 GBP346_A2686 GBP346_A2687     TRUE 0.818 -3.000 0.500 NA   NA
 7548265 7548266 GBP346_A2687 GBP346_A2688     FALSE 0.068 17.000 0.000 NA   NA
 7548266 7548267 GBP346_A2688 GBP346_A2689     TRUE 0.615 -181.000 0.500 NA   NA
 7548267 7548268 GBP346_A2689 GBP346_A2690     TRUE 0.832 12.000 1.000 NA   NA
 7548269 7548270 GBP346_A2691 GBP346_A2692     FALSE 0.535 144.000 0.400 1.000   NA
 7548270 7548271 GBP346_A2692 GBP346_A2693     TRUE 0.921 0.000 1.000 1.000   NA
 7548271 7548272 GBP346_A2693 GBP346_A2694     FALSE 0.067 -7.000 0.000 NA   NA
 7548274 7548275 GBP346_A2696 GBP346_A2697     TRUE 0.769 10.000 0.375 NA   NA
 7548275 7548276 GBP346_A2697 GBP346_A2698     TRUE 0.668 -34.000 0.571 NA   NA
 7548276 7548277 GBP346_A2698 GBP346_A2699     TRUE 0.786 9.000 0.417 NA   NA
 7548277 7548278 GBP346_A2699 GBP346_A2700     TRUE 0.668 18.000 0.333 NA   NA
 7548278 7548279 GBP346_A2700 GBP346_A2701     TRUE 0.689 -46.000 0.800 NA   NA
 7548279 7548280 GBP346_A2701 GBP346_A2702     FALSE 0.515 70.000 0.192 NA   NA
 7548280 7548281 GBP346_A2702 GBP346_A2703     TRUE 0.768 11.000 0.423 NA   NA
 7548281 7548282 GBP346_A2703 GBP346_A2704     FALSE 0.546 66.000 0.217 NA   NA
 7548282 7548283 GBP346_A2704 GBP346_A2705     TRUE 0.776 16.000 0.667 NA   NA
 7548283 7548284 GBP346_A2705 GBP346_A2706     TRUE 0.714 -12.000 0.556 NA   NA
 7548284 7548285 GBP346_A2706 GBP346_A2707     TRUE 0.760 -7.000 0.667 NA   NA
 7548285 7548286 GBP346_A2707 GBP346_A2708     TRUE 0.792 -3.000 0.375 NA   NA
 7548286 7548287 GBP346_A2708 GBP346_A2709     TRUE 0.802 -3.000 0.429 NA   NA
 7548287 7548288 GBP346_A2709 GBP346_A2710     FALSE 0.591 65.000 0.286 NA   NA
 7548288 7548289 GBP346_A2710 GBP346_A2711     TRUE 0.760 3.000 0.222 NA   NA
 7548289 7548290 GBP346_A2711 GBP346_A2712     TRUE 0.760 -10.000 0.778 NA   NA
 7548290 7548291 GBP346_A2712 GBP346_A2713     TRUE 0.774 2.000 0.250 NA   NA
 7548291 7548292 GBP346_A2713 GBP346_A2714     TRUE 0.784 4.000 0.286 NA   NA
 7548292 7548293 GBP346_A2714 GBP346_A2715     TRUE 0.662 -34.000 0.545 NA   NA
 7548293 7548294 GBP346_A2715 GBP346_A2716     TRUE 0.702 27.000 0.588 NA   NA
 7548294 7548295 GBP346_A2716 GBP346_A2717     TRUE 0.897 -3.000 0.706 1.000   NA
 7548295 7548296 GBP346_A2717 GBP346_A2718     FALSE 0.107 -3.000 0.000 NA   NA
 7548296 7548297 GBP346_A2718 GBP346_A2719     FALSE 0.090 11.000 0.000 NA   NA
 7548297 7548298 GBP346_A2719 GBP346_A2720     FALSE 0.569 -163.000 0.353 NA   NA
 7548298 7548299 GBP346_A2720 GBP346_A2721     FALSE 0.080 237.000 0.250 NA   NA
 7548299 7548300 GBP346_A2721 GBP346_A2722     FALSE 0.000 805.000 0.000 NA   NA
 7548300 7548301 GBP346_A2722 GBP346_A2723     FALSE 0.004 218.000 0.000 NA   NA
 7548301 7548302 GBP346_A2723 GBP346_A2724     TRUE 0.620 120.000 0.571 NA   NA
 7548302 7548303 GBP346_A2724 GBP346_A2725     FALSE 0.473 131.000 0.333 NA   NA
 7548303 7548304 GBP346_A2725 GBP346_A2726     FALSE 0.000 601.000 0.000 NA   NA
 7548304 7548305 GBP346_A2726 GBP346_A2727     FALSE 0.122 2.000 0.000 NA   NA
 7548306 7548307 GBP346_A2728 GBP346_A2729     TRUE 0.726 52.000 0.800 NA   NA
 7548307 7548308 GBP346_A2729 GBP346_A2730     TRUE 0.865 -3.000 1.000 NA   NA
 7548308 7548309 GBP346_A2730 GBP346_A2731     TRUE 0.865 -3.000 1.000 NA   NA
 7548309 7548310 GBP346_A2731 GBP346_A2732     TRUE 0.854 0.000 0.600 NA   NA
 7548312 7548313 GBP346_A2734 GBP346_A2735     TRUE 0.855 9.000 1.000 NA   NA
 7548315 7548316 GBP346_A2737 GBP346_A2739 mutS   FALSE 0.266 -13.000 0.033 NA   NA
 7548319 7548320 GBP346_A2741 GBP346_A2742     FALSE 0.461 5.000 0.038 NA   NA
 7548320 7548321 GBP346_A2742 GBP346_A2743   dapA_2 TRUE 0.843 111.000 0.065 NA Y NA
 7548321 7548322 GBP346_A2743 GBP346_A2744 dapA_2   FALSE 0.482 45.000 0.147 NA   NA
 7548322 7548323 GBP346_A2744 GBP346_A2745   trpS_1 TRUE 0.675 -3.000 0.148 NA   NA
 7548323 7548324 GBP346_A2745 GBP346_A2746 trpS_1   TRUE 0.794 9.000 0.158 1.000   NA
 7548324 7548325 GBP346_A2746 GBP346_A2747     FALSE 0.387 99.000 0.104 NA   NA
 7548325 7548326 GBP346_A2747 GBP346_A2748     FALSE 0.588 65.000 0.281 NA   NA
 7548326 7548327 GBP346_A2748 GBP346_A2749     FALSE 0.199 16.000 0.007 NA   NA
 7548327 7548328 GBP346_A2749 GBP346_A2750     FALSE 0.515 8.000 0.062 NA   NA
 7548328 7548329 GBP346_A2750 GBP346_A2751     FALSE 0.144 155.000 0.076 NA   NA
 7548330 7548331 GBP346_A2752 GBP346_A2753   hslO FALSE 0.548 39.000 0.061 1.000   NA
 7548331 7548332 GBP346_A2753 GBP346_A2754 hslO   FALSE 0.192 84.000 0.022 NA   NA
 7548333 7548334 GBP346_A2755 GBP346_A2756   eno TRUE 0.801 92.000 0.241 1.000 N NA
 7548334 7548335 GBP346_A2756 GBP346_A2757 eno kdsA_1 TRUE 0.740 104.000 0.125 1.000 N NA
 7548335 7548336 GBP346_A2757 GBP346_A2758 kdsA_1 pyrG TRUE 0.885 -3.000 0.138 1.000 N NA
 7548338 7548339 GBP346_A2759 GBP346_A2761     FALSE 0.448 37.000 0.012 1.000   NA
 7548339 7548340 GBP346_A2761 GBP346_A2762     FALSE 0.320 11.000 0.022 NA   NA
 7548340 7548341 GBP346_A2762 GBP346_A2763   lolD TRUE 0.787 5.000 0.061 NA N NA
 7548341 7548342 GBP346_A2763 GBP346_A2764 lolD   TRUE 0.937 -7.000 0.620 0.051 N NA
 7548345 7548346 GBP346_A2767 GBP346_A2768   recJ FALSE 0.192 16.000 0.006 NA   NA
 7548346 7548347 GBP346_A2768 GBP346_A2769 recJ prfB FALSE 0.037 361.000 0.028 1.000 N NA
 7548347 7548348 GBP346_A2769 GBP346_A2770 prfB lysS TRUE 0.953 94.000 0.162 0.027 Y NA
 7548348 7548349 GBP346_A2770 GBP346_A2771 lysS   FALSE 0.031 351.000 0.000 1.000 N NA
 7548350 7548351 GBP346_A2772 GBP346_A2773   iscX FALSE 0.306 -3.000 0.012 NA   NA
 7548351 7548352 GBP346_A2773 GBP346_A2774 iscX fdx TRUE 0.814 19.000 0.625 1.000   NA
 7548352 7548353 GBP346_A2774 GBP346_A2775 fdx hscA TRUE 0.868 93.000 0.794 1.000 N NA
 7548353 7548354 GBP346_A2775 GBP346_A2776 hscA hscB TRUE 0.953 58.000 0.634 1.000 Y NA
 7548354 7548355 GBP346_A2776 GBP346_A2777 hscB iscA TRUE 0.704 122.000 0.500 1.000   NA
 7548355 7548356 GBP346_A2777 GBP346_A2778 iscA iscU TRUE 0.867 83.000 0.359 0.002   NA
 7548356 7548357 GBP346_A2778 GBP346_A2779 iscU iscS TRUE 0.846 66.000 0.448 1.000 N NA
 7548357 7548358 GBP346_A2779 GBP346_A2780 iscS   TRUE 0.781 69.000 0.160 1.000 N NA
 7548358 7548359 GBP346_A2780 GBP346_A2781     TRUE 0.658 102.000 0.032 1.000 N NA
 7548359 7548360 GBP346_A2781 GBP346_A2782     FALSE 0.202 77.000 0.024 NA   NA
 7548360 7548361 GBP346_A2782 GBP346_A2783     FALSE 0.413 144.000 0.423 NA   NA
 7548361 7548362 GBP346_A2783 GBP346_A2784     TRUE 0.867 142.000 0.923 NA Y NA
 7548364 7548365 GBP346_A2786 GBP346_A2787     FALSE 0.001 374.000 0.000 NA   NA
 7548366 7548367 GBP346_A2788 GBP346_A2789     FALSE 0.423 89.000 0.118 NA   NA
 7548368 7548369 GBP346_A2790 GBP346_A2791 lpdA_2 aceF FALSE 0.323 307.000 0.463 1.000 Y NA
 7548369 7548370 GBP346_A2791 GBP346_A2792 aceF aceE_1 TRUE 0.847 133.000 0.101 1.000 Y NA
 7548370 7548371 GBP346_A2792 GBP346_A2793 aceE_1   FALSE 0.340 132.000 0.154 NA   NA
 7548372 7548373 GBP346_A2794 GBP346_A2795     TRUE 0.988 -3.000 0.632 0.010 Y NA
 7548373 7548374 GBP346_A2795 GBP346_A2796     FALSE 0.114 317.000 0.404 1.000 N NA
 7548380 7548381 GBP346_A2802 GBP346_A2803 narD_1   TRUE 0.926 44.000 0.458 NA Y NA
 7548383 7548384 GBP346_A2805 GBP346_A2806   narH_1 TRUE 0.989 -3.000 0.526 0.001 Y NA
 7548384 7548385 GBP346_A2806 GBP346_A2807 narH_1   TRUE 0.990 -3.000 0.667 0.001 Y NA
 7548385 7548386 GBP346_A2807 GBP346_A2808   narI_1 TRUE 0.975 37.000 0.412 0.001 Y NA
 7548386 7548387 GBP346_A2808 GBP346_A2809 narI_1   FALSE 0.550 142.000 0.098 1.000 N NA
 7548387 7548388 GBP346_A2809 GBP346_A2810     TRUE 0.976 24.000 0.686 0.010 Y NA
 7548388 7548389 GBP346_A2810 GBP346_A2811   xth_2 TRUE 0.608 146.000 0.015 0.033 N NA
 7548390 7548391 GBP346_A2812 GBP346_A2813 ntrC ntrB TRUE 0.969 38.000 0.587 0.073 Y NA
 7548391 7548392 GBP346_A2813 GBP346_A2814 ntrB glnA FALSE 0.364 167.000 0.053 1.000 N NA
 7548392 7548393 GBP346_A2814 GBP346_A2815 glnA   FALSE 0.051 49.000 0.000 NA   NA
 7548395 7548396 GBP346_A2817 GBP346_A2818     TRUE 0.787 -3.000 0.123 1.000   NA
 7548398 7548399 GBP346_A2820 GBP346_A2821     TRUE 0.626 17.000 0.220 NA   NA
 7548399 7548400 GBP346_A2821 GBP346_A2822     FALSE 0.520 7.000 0.060 NA   NA
 7548400 7548401 GBP346_A2822 GBP346_A2823   hrpA FALSE 0.158 -21.000 0.009 NA   NA
 7548402 7548403 GBP346_A2824 GBP346_A2825 argA   TRUE 0.672 53.000 0.123 NA N NA
 7548404 7548405 GBP346_A2826 GBP346_A2827     TRUE 0.854 -3.000 0.800 NA   NA
 7548405 7548406 GBP346_A2827 GBP346_A2828     TRUE 0.764 -3.000 0.286 NA   NA
 7548406 7548407 GBP346_A2828 GBP346_A2829     TRUE 0.869 -3.000 0.094 1.000 N NA
 7548408 7548409 GBP346_A2830 GBP346_A2831     FALSE 0.013 164.000 0.000 NA   NA
 7548410 7548411 GBP346_A2832 GBP346_A2833     FALSE 0.003 240.000 0.000 NA   NA
 7548411 7548412 GBP346_A2833 GBP346_A2834     FALSE 0.005 217.000 0.000 NA   NA
 7548412 7548413 GBP346_A2834 GBP346_A2835     TRUE 0.818 35.000 0.250 1.000 N NA
 7548413 7548414 GBP346_A2835 GBP346_A2836     TRUE 0.666 33.000 0.167 1.000   NA
 7548414 7548415 GBP346_A2836 GBP346_A2837     TRUE 0.650 57.000 0.429 NA   NA
 7548417 7548418 GBP346_A2838 GBP346_A2840 hutG   FALSE 0.536 -3.000 0.067 NA   NA
 7548418 7548419 GBP346_A2840 GBP346_A2841   hutF FALSE 0.174 53.000 0.013 NA   NA
 7548419 7548420 GBP346_A2841 GBP346_A2842 hutF hutI TRUE 0.873 14.000 0.233 1.000 N NA
 7548420 7548421 GBP346_A2842 GBP346_A2843 hutI   FALSE 0.279 -3.000 0.008 NA   NA
 7548421 7548422 GBP346_A2843 GBP346_A2844   hutU_2 FALSE 0.202 21.000 0.016 NA   NA
 7548422 7548423 GBP346_A2844 GBP346_A2845 hutU_2 hutC TRUE 0.706 43.000 0.045 1.000 N NA
 7548423 7548424 GBP346_A2845 GBP346_A2846 hutC hutH TRUE 0.846 5.000 0.033 1.000 N NA
 7548426 7548427 GBP346_A2848 GBP346_A2849     FALSE 0.241 105.000 0.043 NA   NA
 7548427 7548428 GBP346_A2849 GBP346_A2850     FALSE 0.333 18.000 0.047 NA   NA
 7548428 7548429 GBP346_A2850 GBP346_A2851     FALSE 0.000 548.000 0.000 NA   NA
 7548429 7548430 GBP346_A2851 GBP346_A2852     TRUE 0.689 82.000 0.714 NA   NA
 7548430 7548431 GBP346_A2852 GBP346_A2853     TRUE 0.638 49.000 0.400 NA   NA
 7548431 7548432 GBP346_A2853 GBP346_A2854     FALSE 0.004 230.000 0.000 NA   NA
 7548432 7548433 GBP346_A2854 GBP346_A2855   cysC_2 FALSE 0.123 0.000 0.000 NA   NA
 7548433 7548434 GBP346_A2855 GBP346_A2856 cysC_2 phrB FALSE 0.532 131.000 0.014 1.000 N NA
 7548437 7548438 GBP346_A2859 GBP346_A2860     FALSE 0.254 80.000 0.043 NA   NA
 7548438 7548439 GBP346_A2860 GBP346_A2861     FALSE 0.437 55.000 0.112 NA   NA
 7548439 7548440 GBP346_A2861 GBP346_A2862     FALSE 0.272 41.000 0.043 NA   NA
 7548440 7548441 GBP346_A2862 GBP346_A2863     TRUE 0.875 5.000 1.000 NA   NA
 7548441 7548442 GBP346_A2863 GBP346_A2864   nrdD FALSE 0.172 114.000 0.022 NA   NA
 7548442 7548443 GBP346_A2864 GBP346_A2865 nrdD   TRUE 0.808 3.000 0.356 NA   NA
 7548443 7548444 GBP346_A2865 GBP346_A2866     FALSE 0.492 55.000 0.152 NA   NA
 7548445 7548446 GBP346_A2867 GBP346_A2868     FALSE 0.320 37.000 0.058 NA   NA
 7548446 7548447 GBP346_A2868 GBP346_A2869     FALSE 0.424 40.000 0.106 NA   NA
 7548447 7548448 GBP346_A2869 GBP346_A2870   yhbV TRUE 0.815 56.000 0.235 1.000 N NA
 7548448 7548449 GBP346_A2870 GBP346_A2871 yhbV   TRUE 0.980 41.000 0.948 0.002 Y NA
 7548449 7548450 GBP346_A2871 GBP346_A2872     FALSE 0.369 -3.000 0.022 NA   NA
 7548450 7548451 GBP346_A2872 GBP346_A2873     FALSE 0.144 -27.000 0.007 NA   NA
 7548453 7548454 GBP346_A2874 GBP346_A2876   hemN_1 TRUE 0.875 9.000 0.132 1.000 N NA
 7548454 7548455 GBP346_A2876 GBP346_A2877 hemN_1   FALSE 0.506 149.000 0.094 1.000 N NA
 7548456 7548457 GBP346_A2878 GBP346_A2879     TRUE 0.826 13.000 1.000 NA   NA
 7548457 7548458 GBP346_A2879 GBP346_A2881     TRUE 0.849 -3.000 0.750 NA   NA
 7548460 7548461 GBP346_A2882 GBP346_A2883 sufB sufC TRUE 0.950 30.000 0.466 1.000 Y NA
 7548461 7548462 GBP346_A2883 GBP346_A2884 sufC   TRUE 0.978 5.000 0.482 1.000 Y NA
 7548462 7548463 GBP346_A2884 GBP346_A2885     TRUE 0.792 -7.000 0.081 1.000 N NA
 7548463 7548464 GBP346_A2885 GBP346_A2886     TRUE 0.907 -3.000 0.249 1.000 N NA
 7548464 7548465 GBP346_A2886 GBP346_A2887   sufT FALSE 0.430 -3.000 0.036 NA   NA
 7548466 7548467 GBP346_A2888 GBP346_A2889     TRUE 0.629 -46.000 0.500 NA   NA
 7548470 7548471 GBP346_A2892 GBP346_A2893     TRUE 0.751 32.000 1.000 NA   NA
 7548471 7548472 GBP346_A2893 GBP346_A2894   cyoA TRUE 0.814 10.000 0.600 NA   NA
 7548472 7548473 GBP346_A2894 GBP346_A2895 cyoA cyoB_1 TRUE 0.988 4.000 0.444 0.009 Y NA
 7548473 7548474 GBP346_A2895 GBP346_A2896 cyoB_1 cyoC_1 TRUE 0.987 0.000 0.444 0.040 Y NA
 7548474 7548475 GBP346_A2896 GBP346_A2897 cyoC_1 cyoD_1 TRUE 0.990 1.000 0.857 0.040 Y NA
 7548475 7548476 GBP346_A2897 GBP346_A2898 cyoD_1   TRUE 0.775 112.000 0.227 1.000 N NA
 7548477 7548478 GBP346_A2899 GBP346_A2900     FALSE 0.459 77.000 0.143 NA   NA
 7548480 7548481 GBP346_A2902 GBP346_A2903 astE astB TRUE 0.926 -16.000 0.126 1.000 Y NA
 7548481 7548482 GBP346_A2903 GBP346_A2904 astB astD TRUE 0.843 14.000 0.126 1.000 N NA
 7548482 7548483 GBP346_A2904 GBP346_A2905 astD astA TRUE 0.948 5.000 0.875 1.000 N NA
 7548483 7548484 GBP346_A2905 GBP346_A2906 astA aruF TRUE 0.991 -3.000 0.778 0.001 Y NA
 7548484 7548485 GBP346_A2906 GBP346_A2907 aruF   TRUE 0.957 45.000 0.833 1.000 Y NA
 7548487 7548488 GBP346_A2909 GBP346_A2910     TRUE 0.859 19.000 0.353 1.000 N NA
 7548488 7548489 GBP346_A2910 GBP346_A2911     TRUE 0.935 22.000 0.200 1.000 Y NA
 7548489 7548490 GBP346_A2911 GBP346_A2912     TRUE 0.982 -3.000 0.200 0.009 Y NA
 7548492 7548493 GBP346_A2914 GBP346_A2915     FALSE 0.008 704.000 0.238 NA   NA
 7548493 7548494 GBP346_A2915 GBP346_A2916   hpnK TRUE 0.785 -3.000 0.347 NA   NA
 7548494 7548495 GBP346_A2916 GBP346_A2917 hpnK hpnJ TRUE 0.895 4.000 0.527 1.000   NA
 7548495 7548496 GBP346_A2917 GBP346_A2918 hpnJ hpnI_2 TRUE 0.805 88.000 0.257 1.000 N NA
 7548499 7548500 GBP346_A2921 GBP346_A2922     FALSE 0.235 36.000 0.029 NA   NA
 7548502 7548503 GBP346_A2924 GBP346_A2926     FALSE 0.009 808.000 0.067 NA N NA
 7548506 7548507 GBP346_A2928 GBP346_A2929     FALSE 0.230 56.000 0.027 NA   NA
 7548507 7548508 GBP346_A2929 GBP346_A2930     FALSE 0.002 267.000 0.000 NA   NA
 7548512 7548513 GBP346_A2934 GBP346_A2935 otsA_2 otsB TRUE 0.981 -3.000 0.079 0.001 Y NA
 7548516 7548517 GBP346_A2938 GBP346_A2939     FALSE 0.519 27.000 0.167 NA   NA
 7548517 7548518 GBP346_A2939 GBP346_A2940     TRUE 0.650 11.000 0.167 NA   NA
 7548519 7548520 GBP346_A2941 GBP346_A2942     FALSE 0.535 40.000 0.200 NA   NA
 7548521 7548522 GBP346_A2943 GBP346_A2944     FALSE 0.538 71.000 0.028 NA N NA
 7548523 7548524 GBP346_A2945 GBP346_A2946     FALSE 0.041 115.000 0.000 NA   NA
 7548524 7548525 GBP346_A2946 GBP346_A2947     FALSE 0.052 60.000 0.000 NA   NA
 7548525 7548526 GBP346_A2947 GBP346_A2948   pgsA FALSE 0.007 196.000 0.000 NA   NA
 7548526 7548527 GBP346_A2948 GBP346_A2949 pgsA uvrC TRUE 0.667 98.000 0.227 1.000   NA
 7548527 7548528 GBP346_A2949 GBP346_A2950 uvrC   FALSE 0.268 3.000 0.003 NA   NA
 7548529 7548530 GBP346_A2951 GBP346_A2952   efp FALSE 0.075 190.000 0.074 NA   NA
 7548533 7548534 GBP346_A2955 GBP346_A2956   acpS TRUE 0.753 28.000 0.081 1.000 N NA
 7548534 7548535 GBP346_A2956 GBP346_A2957 acpS pdxJ TRUE 0.920 6.000 0.326 1.000 N NA
 7548535 7548536 GBP346_A2957 GBP346_A2958 pdxJ recO TRUE 0.892 -3.000 0.166 1.000 N NA
 7548536 7548537 GBP346_A2958 GBP346_A2959 recO era FALSE 0.558 20.000 0.049 1.000   NA
 7548537 7548538 GBP346_A2959 GBP346_A2960 era   TRUE 0.738 70.000 0.058 0.033   NA
 7548538 7548539 GBP346_A2960 GBP346_A2961   lepB FALSE 0.505 151.000 0.117 1.000 N NA
 7548539 7548540 GBP346_A2961 GBP346_A2962 lepB lepA TRUE 0.849 16.000 0.187 1.000 N NA
 7548540 7548541 GBP346_A2962 GBP346_A2963 lepA   FALSE 0.011 241.000 0.010 NA   NA
 7548541 7548542 GBP346_A2963 GBP346_A2964     FALSE 0.551 -3.000 0.072 NA   NA
 7548542 7548543 GBP346_A2964 GBP346_A2965     TRUE 0.783 17.000 0.218 NA N NA
 7548543 7548544 GBP346_A2965 GBP346_A2966     TRUE 0.960 15.000 0.856 NA Y NA
 7548544 7548545 GBP346_A2966 GBP346_A2967   rpoE TRUE 0.819 48.000 0.705 NA N NA
 7548545 7548546 GBP346_A2967 GBP346_A2968 rpoE   FALSE 0.292 106.000 0.062 NA   NA
 7548546 7548547 GBP346_A2968 GBP346_A2969   fabF FALSE 0.339 12.000 0.028 NA   NA
 7548547 7548548 GBP346_A2969 GBP346_A2970 fabF acpP TRUE 0.818 157.000 0.346 1.000 Y NA
 7548548 7548549 GBP346_A2970 GBP346_A2971 acpP fabG TRUE 0.925 144.000 0.321 0.003 Y NA
 7548549 7548550 GBP346_A2971 GBP346_A2972 fabG fabD_1 TRUE 0.972 51.000 0.432 0.003 Y NA
 7548550 7548551 GBP346_A2972 GBP346_A2973 fabD_1   TRUE 0.962 71.000 0.182 0.003 Y NA
 7548551 7548552 GBP346_A2973 GBP346_A2974   plsX TRUE 0.989 0.000 0.380 0.003 Y NA
 7548552 7548553 GBP346_A2974 GBP346_A2975 plsX rpmF TRUE 0.692 140.000 0.418 1.000 N NA
 7548553 7548554 GBP346_A2975 GBP346_A2976 rpmF   TRUE 0.665 97.000 0.599 NA   NA
 7548555 7548556 GBP346_A2977 GBP346_A2978 maf_2   TRUE 0.621 -3.000 0.107 NA   NA
 7548557 7548558 GBP346_A2979 GBP346_A2980     TRUE 0.707 94.000 0.218 NA N NA
 7548558 7548559 GBP346_A2980 GBP346_A2981     TRUE 0.713 -3.000 0.199 NA   NA
 7548559 7548560 GBP346_A2981 GBP346_A2982     TRUE 0.872 6.000 0.389 1.000   NA
 7548561 7548562 GBP346_A2983 GBP346_A2984   moaA TRUE 0.639 119.000 0.042 1.000 N NA
 7548562 7548563 GBP346_A2984 GBP346_A2986 moaA mobA TRUE 0.969 15.000 0.075 0.003 Y NA
 7548565 7548566 GBP346_A2987 GBP346_A2988     FALSE 0.496 37.000 0.156 NA   NA
 7548566 7548567 GBP346_A2988 GBP346_A2989     TRUE 0.794 -3.000 0.389 NA   NA
 7548568 7548569 GBP346_A2990 GBP346_A2991     FALSE 0.511 -3.000 0.058 NA   NA
 7548569 7548570 GBP346_A2991 GBP346_A2992     TRUE 0.869 -3.000 0.283 NA N NA
 7548570 7548571 GBP346_A2992 GBP346_A2993     FALSE 0.556 -10.000 0.170 NA   NA
 7548571 7548572 GBP346_A2993 GBP346_A2994   pncB_2 FALSE 0.309 145.000 0.063 1.000   NA
 7548573 7548574 GBP346_A2995 GBP346_A2996     FALSE 0.324 -82.000 0.080 NA   NA
 7548574 7548575 GBP346_A2996 GBP346_A2997     FALSE 0.043 108.000 0.000 NA   NA
 7548575 7548576 GBP346_A2997 GBP346_A2998     FALSE 0.047 88.000 0.000 NA   NA
 7548576 7548577 GBP346_A2998 GBP346_A2999     FALSE 0.023 138.000 0.000 NA   NA
 7548577 7548578 GBP346_A2999 GBP346_A3000     FALSE 0.029 196.000 0.016 NA   NA
 7548578 7548579 GBP346_A3000 GBP346_A3001     TRUE 0.705 63.000 0.667 NA   NA
 7548580 7548581 GBP346_A3002 GBP346_A3003     TRUE 0.690 57.000 0.571 NA   NA
 7548582 7548583 GBP346_A3004 GBP346_A3005     FALSE 0.391 125.000 0.029 1.000   NA
 7548586 7548587 GBP346_A3008 GBP346_A3009     FALSE 0.054 182.000 0.038 NA   NA
 7548588 7548589 GBP346_A3010 GBP346_A3011     FALSE 0.001 369.000 0.000 NA   NA
 7548589 7548590 GBP346_A3011 GBP346_A3012     FALSE 0.091 162.000 0.045 NA   NA
 7548591 7548592 GBP346_A3013 GBP346_A3014 thyA_1   TRUE 0.672 57.000 0.013 1.000 N NA
 7548595 7548596 GBP346_A3017 GBP346_A3018     FALSE 0.258 157.000 0.222 NA   NA
 7548597 7548598 GBP346_A3019 GBP346_A3020     TRUE 0.705 40.000 0.667 NA   NA
 7548599 7548600 GBP346_A3021 GBP346_A3022   folA FALSE 0.174 208.000 0.018 1.000 N NA
 7548601 7548602 GBP346_A3023 GBP346_A3024     FALSE 0.117 118.000 0.008 NA   NA
 7548602 7548603 GBP346_A3024 GBP346_A3025     FALSE 0.150 62.000 0.008 NA   NA
 7548604 7548605 GBP346_A3026 GBP346_A3027     FALSE 0.518 17.000 0.117 NA   NA
 7548607 7548608 GBP346_A3029 GBP346_A3030   rsgA TRUE 0.703 -3.000 0.046 1.000   NA
 7548608 7548609 GBP346_A3030 GBP346_A3031 rsgA   FALSE 0.135 69.000 0.006 NA   NA
 7548610 7548611 GBP346_A3032 GBP346_A3033     TRUE 0.705 50.000 0.254 1.000   NA
 7548612 7548613 GBP346_A3034 GBP346_A3035     FALSE 0.001 457.000 0.000 NA   NA
 7548614 7548615 GBP346_A3036 GBP346_A3037 rplS trmD TRUE 0.893 138.000 0.567 1.000 Y NA
 7548615 7548616 GBP346_A3037 GBP346_A3038 trmD rimM TRUE 0.981 2.000 0.672 1.000 Y NA
 7548616 7548617 GBP346_A3038 GBP346_A3039 rimM rpsP TRUE 0.967 45.000 0.342 0.010 Y NA
 7548618 7548619 GBP346_A3040 GBP346_A3042     FALSE 0.482 107.000 0.196 NA   NA
 7548620 7548621 GBP346_A3041 GBP346_A3043     FALSE 0.285 109.000 0.060 NA   NA
 7548623 7548624 GBP346_A3045 GBP346_A3046     TRUE 0.897 114.000 0.462 0.010 N NA
 7548624 7548625 GBP346_A3046 GBP346_A3047     TRUE 0.981 16.000 0.625 0.011 Y NA
 7548625 7548626 GBP346_A3047 GBP346_A3048   metQ FALSE 0.063 221.000 0.000 NA N NA
 7548626 7548627 GBP346_A3048 GBP346_A3049 metQ   TRUE 0.916 89.000 0.400 NA Y NA
 7548627 7548628 GBP346_A3049 GBP346_A3050     TRUE 0.965 -10.000 0.914 1.000 Y NA
 7548632 7548633 GBP346_A3054 GBP346_A3055 cysM   FALSE 0.018 318.000 0.006 1.000   NA
 7548633 7548634 GBP346_A3055 GBP346_A3056   rfaD FALSE 0.523 72.000 0.056 1.000   NA
 7548634 7548635 GBP346_A3056 GBP346_A3057 rfaD rfaE_2 TRUE 0.930 59.000 0.191 1.000 Y NA
 7548635 7548636 GBP346_A3057 GBP346_A3058 rfaE_2   TRUE 0.895 -31.000 0.043 1.000 Y NA
 7548636 7548637 GBP346_A3058 GBP346_A3059     TRUE 0.768 121.000 0.259 1.000 N NA
 7548637 7548638 GBP346_A3059 GBP346_A3060     FALSE 0.562 53.000 0.229 NA   NA
 7548638 7548639 GBP346_A3060 GBP346_A3061   ihfB TRUE 0.656 -3.000 0.129 NA   NA
 7548639 7548640 GBP346_A3061 GBP346_A3062 ihfB rpsA TRUE 0.835 23.000 0.292 1.000 N NA
 7548640 7548641 GBP346_A3062 GBP346_A3063 rpsA cmk TRUE 0.630 145.000 0.281 1.000 N NA
 7548641 7548642 GBP346_A3063 GBP346_A3064 cmk aroA TRUE 0.820 21.000 0.209 1.000 N NA
 7548642 7548643 GBP346_A3064 GBP346_A3065 aroA pheA FALSE 0.348 239.000 0.035 1.000 Y NA
 7548643 7548644 GBP346_A3065 GBP346_A3066 pheA serC TRUE 0.920 35.000 0.121 1.000 Y NA
 7548644 7548645 GBP346_A3066 GBP346_A3067 serC   FALSE 0.259 78.000 0.044 NA   NA
 7548645 7548646 GBP346_A3067 GBP346_A3068   gyrA FALSE 0.195 101.000 0.025 NA   NA
 7548647 7548648 GBP346_A3069 GBP346_A3070     FALSE 0.001 390.000 0.000 NA   NA
 7548648 7548649 GBP346_A3070 GBP346_A3071   ubiG FALSE 0.589 124.000 0.017 1.000 N NA
 7548649 7548650 GBP346_A3071 GBP346_A3072 ubiG gph_1 TRUE 0.720 26.000 0.259 1.000   NA
 7548650 7548651 GBP346_A3072 GBP346_A3073 gph_1 ssrA FALSE 0.108 7.000 0.000 NA   NA
 7548651 7548652 GBP346_A3073 GBP346_A3075 ssrA   FALSE 0.006 200.000 0.000 NA   NA
 7548652 7548653 GBP346_A3075 GBP346_A3076     FALSE 0.051 52.000 0.000 NA   NA
 7548654 7548655 GBP346_A3077 GBP346_A3078     FALSE 0.042 112.000 0.000 NA   NA
 7548655 7548656 GBP346_A3078 GBP346_A3079     FALSE 0.009 179.000 0.000 NA   NA
 7548656 7548657 GBP346_A3079 GBP346_A3080     TRUE 0.818 -3.000 0.500 NA   NA
 7548657 7548658 GBP346_A3080 GBP346_A3081     FALSE 0.067 -7.000 0.000 NA   NA
 7548658 7548659 GBP346_A3081 GBP346_A3082     FALSE 0.001 362.000 0.000 NA   NA
 7548659 7548660 GBP346_A3082 GBP346_A3083     FALSE 0.123 0.000 0.000 NA   NA
 7548660 7548661 GBP346_A3083 GBP346_A3084     FALSE 0.044 103.000 0.000 NA   NA
 7548661 7548662 GBP346_A3084 GBP346_A3085     FALSE 0.000 538.000 0.000 NA   NA
 7548663 7548664 GBP346_A3086 GBP346_A3087     TRUE 0.638 92.000 0.462 NA   NA
 7548665 7548666 GBP346_A3088 GBP346_A3089     FALSE 0.001 308.000 0.000 NA   NA
 7548667 7548668 GBP346_A3090 GBP346_A3091     FALSE 0.041 113.000 0.000 NA   NA
 7548670 7548671 GBP346_A3093 GBP346_A3094     FALSE 0.001 482.000 0.000 NA   NA
 7548671 7548672 GBP346_A3094 GBP346_A3095   pmtA TRUE 0.603 82.000 0.364 NA   NA
 7548673 7548674 GBP346_A3096 GBP346_A3097     TRUE 0.641 102.000 0.519 NA   NA
 7548675 7548676 GBP346_A3098 GBP346_A3099     FALSE 0.356 32.000 0.068 NA   NA
 7548676 7548677 GBP346_A3099 GBP346_A3100     TRUE 0.990 -3.000 0.870 0.006 Y NA
 7548677 7548678 GBP346_A3100 GBP346_A3101     TRUE 0.829 15.000 0.466 1.000   NA
 7548678 7548679 GBP346_A3101 GBP346_A3102     TRUE 0.926 8.000 0.175 0.001   NA
 7548681 7548682 GBP346_A3104 GBP346_A3105     TRUE 0.643 13.000 0.188 NA   NA
 7548683 7548684 GBP346_A3106 GBP346_A3107     FALSE 0.003 241.000 0.000 NA   NA
 7548684 7548685 GBP346_A3107 GBP346_A3108     FALSE 0.052 54.000 0.000 NA   NA
 7548688 7548689 GBP346_A3111 GBP346_A3112     TRUE 0.802 109.000 0.326 1.000 N NA
 7548691 7548692 GBP346_A3114 GBP346_A3115 xdhC add TRUE 0.679 42.000 0.133 NA N NA
 7548692 7548693 GBP346_A3115 GBP346_A3116 add   FALSE 0.542 26.000 0.051 1.000   NA
 7548693 7548694 GBP346_A3116 GBP346_A3117   guaD FALSE 0.551 26.000 0.056 1.000   NA
 7548694 7548695 GBP346_A3117 GBP346_A3119 guaD   FALSE 0.422 81.000 0.121 NA   NA
 7548695 7548696 GBP346_A3119 GBP346_A3120     FALSE 0.339 -3.000 0.017 NA   NA
 7548697 7548698 GBP346_A3121 GBP346_A3122     FALSE 0.436 59.000 0.111 NA   NA
 7548700 7548701 GBP346_A3124 GBP346_A3125   metE FALSE 0.045 100.000 0.000 NA   NA
 7548702 7548703 GBP346_A3126 GBP346_A3127   metR FALSE 0.307 -3.000 0.012 NA   NA
 7548703 7548704 GBP346_A3127 GBP346_A3128 metR fbp TRUE 0.604 129.000 0.053 1.000 N NA
 7548704 7548705 GBP346_A3128 GBP346_A3129 fbp   FALSE 0.076 174.000 0.051 NA   NA
 7548705 7548706 GBP346_A3129 GBP346_A3130     FALSE 0.062 -10.000 0.000 NA   NA
 7548708 7548709 GBP346_A3132 GBP346_A3133     TRUE 0.727 89.000 1.000 NA   NA
 7548712 7548713 GBP346_A3136 GBP346_A3137     TRUE 0.741 -3.000 0.232 NA   NA
 7548713 7548714 GBP346_A3137 GBP346_A3138     TRUE 0.813 9.000 0.548 NA   NA
 7548717 7548718 GBP346_A3141 GBP346_A3143     FALSE 0.002 285.000 0.000 NA   NA
 7548719 7548720 GBP346_A3142 GBP346_A3144     FALSE 0.179 154.000 0.107 NA   NA
 7548720 7548721 GBP346_A3144 GBP346_A3145     TRUE 0.769 146.000 0.357 0.038 N NA
 7548722 7548723 GBP346_A3146 GBP346_A3147     FALSE 0.000 516.000 0.000 NA   NA
 7548725 7548726 GBP346_A3149 GBP346_A3150     FALSE 0.052 58.000 0.000 NA   NA
 7548727 7548728 GBP346_A3151 GBP346_A3152   rpoZ TRUE 0.937 67.000 0.291 1.000 Y NA
 7548728 7548729 GBP346_A3152 GBP346_A3153 rpoZ gmk TRUE 0.852 61.000 0.471 1.000 N NA
 7548729 7548730 GBP346_A3153 GBP346_A3154 gmk   TRUE 0.762 7.000 0.276 NA   NA
 7548731 7548732 GBP346_A3155 GBP346_A3156 rph rdgB TRUE 0.909 -3.000 0.262 1.000 N NA
 7548732 7548733 GBP346_A3156 GBP346_A3157 rdgB   TRUE 0.903 -3.000 0.218 1.000 N NA
 7548733 7548734 GBP346_A3157 GBP346_A3158     FALSE 0.042 112.000 0.000 NA   NA
 7548734 7548735 GBP346_A3158 GBP346_A3159     FALSE 0.003 240.000 0.000 NA   NA
 7548735 7548736 GBP346_A3159 GBP346_A3160     TRUE 0.720 60.000 0.750 NA   NA
 7548736 7548737 GBP346_A3160 GBP346_A3161     FALSE 0.527 144.000 1.000 NA   NA
 7548741 7548742 GBP346_A3165 GBP346_A3166     FALSE 0.079 181.000 0.066 NA   NA
 7548745 7548746 GBP346_A3169 GBP346_A3170   minE FALSE 0.118 122.000 0.010 NA   NA
 7548746 7548747 GBP346_A3170 GBP346_A3171 minE minD TRUE 0.959 13.000 0.618 NA Y NA
 7548747 7548748 GBP346_A3171 GBP346_A3172 minD minC TRUE 0.948 59.000 0.466 1.000 Y NA
 7548748 7548749 GBP346_A3172 GBP346_A3173 minC   FALSE 0.206 154.000 0.021 1.000   NA
 7548750 7548751 GBP346_A3174 GBP346_A3175     FALSE 0.085 233.000 0.250 NA   NA
 7548752 7548753 GBP346_A3176 GBP346_A3177   serS FALSE 0.042 111.000 0.000 NA   NA
 7548755 7548756 GBP346_A3179 GBP346_A3180     FALSE 0.313 198.000 0.167 1.000 N NA
 7548756 7548757 GBP346_A3180 GBP346_A3181     TRUE 0.776 58.000 0.130 1.000 N NA
 7548758 7548759 GBP346_A3182 GBP346_A3183 trxB   FALSE 0.089 168.000 0.053 NA   NA
 7548759 7548760 GBP346_A3183 GBP346_A3184     TRUE 0.605 26.000 0.281 NA   NA
 7548761 7548762 GBP346_A3185 GBP346_A3186     TRUE 0.968 101.000 0.723 0.040 Y NA
 7548762 7548763 GBP346_A3186 GBP346_A3187     TRUE 0.979 -10.000 0.816 0.040 Y NA
 7548763 7548764 GBP346_A3187 GBP346_A3188     FALSE 0.345 -16.000 0.061 NA   NA
 7548764 7548765 GBP346_A3188 GBP346_A3189     TRUE 0.608 21.000 0.267 NA   NA
 7548766 7548767 GBP346_A3190 GBP346_A3191 zwf pgl TRUE 0.892 88.000 0.046 1.000 Y NA
 7548767 7548768 GBP346_A3191 GBP346_A3192 pgl   TRUE 0.920 -22.000 0.117 1.000 Y NA
 7548768 7548769 GBP346_A3192 GBP346_A3193     FALSE 0.043 309.000 0.000 1.000 N NA
 7548769 7548770 GBP346_A3193 GBP346_A4279     FALSE 0.055 25.000 0.000 NA   NA
 7548770 7548771 GBP346_A4279 GBP346_A3194     FALSE 0.060 -11.000 0.000 NA   NA
 7548771 7548772 GBP346_A3194 GBP346_A3195   gltL_1 TRUE 0.931 47.000 0.212 1.000 Y NA
 7548772 7548773 GBP346_A3195 GBP346_A3196 gltL_1   TRUE 0.924 72.000 0.182 1.000 Y NA
 7548773 7548774 GBP346_A3196 GBP346_A3197     FALSE 0.599 -3.000 0.094 NA   NA
 7548776 7548777 GBP346_A3199 GBP346_A3200     FALSE 0.573 105.000 0.333 NA   NA
 7548777 7548778 GBP346_A3200 GBP346_A3201   hemL FALSE 0.280 19.000 0.034 NA   NA
 7548778 7548779 GBP346_A3201 GBP346_A3202 hemL ribD_1 TRUE 0.895 29.000 0.017 1.000 Y NA
 7548779 7548780 GBP346_A3202 GBP346_A3203 ribD_1 ribE TRUE 0.964 15.000 0.456 1.000 Y NA
 7548782 7548783 GBP346_A3205 GBP346_A3206   ribBA FALSE 0.256 33.000 0.034 NA   NA
 7548783 7548784 GBP346_A3206 GBP346_A3207 ribBA ribH TRUE 0.948 80.000 0.051 0.002 Y NA
 7548784 7548785 GBP346_A3207 GBP346_A3208 ribH nusB TRUE 0.918 -3.000 0.347 1.000 N NA
 7548785 7548786 GBP346_A3208 GBP346_A3209 nusB   TRUE 0.701 65.000 0.042 1.000 N NA
 7548786 7548787 GBP346_A3209 GBP346_A3210     FALSE 0.003 249.000 0.000 NA   NA
 7548789 7548790 GBP346_A3212 GBP346_A3213     FALSE 0.571 62.000 0.042 NA N NA
 7548793 7548794 GBP346_A3215 GBP346_A3217     TRUE 0.740 -3.000 0.231 NA   NA
 7548795 7548796 GBP346_A3218 GBP346_A3219     TRUE 0.661 5.000 0.012 1.000   NA
 7548797 7548798 GBP346_A3220 GBP346_A3221   crcB FALSE 0.446 24.000 0.110 NA   NA
 7548802 7548803 GBP346_A3225 GBP346_A3226     FALSE 0.160 126.000 0.026 NA   NA
 7548803 7548804 GBP346_A3226 GBP346_A3227     FALSE 0.052 -22.000 0.000 NA   NA
 7548804 7548805 GBP346_A3227 GBP346_A3228     FALSE 0.117 5.000 0.000 NA   NA
 7548805 7548806 GBP346_A3228 GBP346_A3229     FALSE 0.000 705.000 0.000 NA   NA
 7548806 7548807 GBP346_A3229 GBP346_A3230     FALSE 0.047 94.000 0.000 NA   NA
 7548808 7548809 GBP346_A3231 GBP346_A3232     FALSE 0.000 686.000 0.000 NA   NA
 7548810 7548811 GBP346_A3233 GBP346_A3234     FALSE 0.435 -61.000 0.152 NA   NA
 7548812 7548813 GBP346_A3235 GBP346_A3236   trmB FALSE 0.012 167.000 0.000 NA   NA
 7548814 7548815 GBP346_A3237 GBP346_A3238 uppP   FALSE 0.455 77.000 0.140 NA   NA
 7548815 7548816 GBP346_A3238 GBP346_A3239     TRUE 0.728 -3.000 0.212 NA   NA
 7548816 7548817 GBP346_A3239 GBP346_A3240     FALSE 0.308 26.000 0.050 NA   NA
 7548818 7548819 GBP346_A3241 GBP346_A3242 hemN_2   FALSE 0.374 82.000 0.092 NA   NA
 7548819 7548820 GBP346_A3242 GBP346_A3243     FALSE 0.262 108.000 0.051 NA   NA
 7548820 7548821 GBP346_A3243 GBP346_A3244     TRUE 0.891 9.000 0.200 1.000 N NA
 7548822 7548823 GBP346_A3245 GBP346_A3246     TRUE 0.841 -3.000 0.667 NA   NA
 7548824 7548825 GBP346_A3247 GBP346_A3248     TRUE 0.928 95.000 0.654 NA Y NA
 7548825 7548826 GBP346_A3248 GBP346_A3249   urtC TRUE 0.989 2.000 0.758 0.039 Y NA
 7548826 7548827 GBP346_A3249 GBP346_A3250 urtC urtD TRUE 0.904 -3.000 0.823 1.000   NA
 7548827 7548828 GBP346_A3250 GBP346_A3251 urtD urtE TRUE 0.950 5.000 0.731 0.016   NA
 7548828 7548829 GBP346_A3251 GBP346_A3252 urtE ureD FALSE 0.143 275.000 0.221 1.000 N NA
 7548829 7548830 GBP346_A3252 GBP346_A3253 ureD   FALSE 0.172 49.000 0.013 NA   NA
 7548830 7548831 GBP346_A3253 GBP346_A3254   ureA FALSE 0.182 60.000 0.015 NA   NA
 7548831 7548832 GBP346_A3254 GBP346_A3255 ureA ureB TRUE 0.976 90.000 0.595 0.001 Y NA
 7548832 7548833 GBP346_A3255 GBP346_A3256 ureB ureC TRUE 0.976 65.000 0.486 0.001 Y NA
 7548833 7548834 GBP346_A3256 GBP346_A3257 ureC   TRUE 0.938 18.000 0.315 0.001 N NA
 7548834 7548835 GBP346_A3257 GBP346_A3258   ureF TRUE 0.972 -43.000 0.560 0.002 Y NA
 7548835 7548836 GBP346_A3258 GBP346_A3259 ureF ureG TRUE 0.977 31.000 0.550 0.002 Y NA
 7548837 7548838 GBP346_A3260 GBP346_A3261     FALSE 0.304 38.000 0.052 NA   NA
 7548838 7548839 GBP346_A3261 GBP346_A3262   rfaC_2 TRUE 0.706 16.000 0.349 NA   NA
 7548839 7548840 GBP346_A3262 GBP346_A3263 rfaC_2   FALSE 0.308 181.000 0.067 1.000 N NA
 7548841 7548842 GBP346_A3264 GBP346_A3265     TRUE 0.635 -3.000 0.116 NA   NA
 7548842 7548843 GBP346_A3265 GBP346_A3266     FALSE 0.309 29.000 0.050 NA   NA
 7548843 7548844 GBP346_A3266 GBP346_A3267   galE TRUE 0.937 15.000 0.067 1.000 Y NA
 7548844 7548845 GBP346_A3267 GBP346_A3268 galE   TRUE 0.922 28.000 0.111 1.000 Y NA
 7548846 7548847 GBP346_A3269 GBP346_A3270     FALSE 0.126 173.000 0.107 NA   NA
 7548847 7548848 GBP346_A3270 GBP346_A3271   wbiH TRUE 0.963 7.000 0.129 1.000 Y NA
 7548848 7548849 GBP346_A3271 GBP346_A3272 wbiH   TRUE 0.948 18.000 0.250 1.000 Y NA
 7548849 7548850 GBP346_A3272 GBP346_A3273     FALSE 0.571 -3.000 0.080 NA   NA
 7548850 7548851 GBP346_A3273 GBP346_A3274     FALSE 0.297 105.000 0.063 NA   NA
 7548851 7548852 GBP346_A3274 GBP346_A3275     FALSE 0.385 52.000 0.086 NA   NA
 7548852 7548853 GBP346_A3275 GBP346_A3276     TRUE 0.794 4.000 0.318 NA   NA
 7548853 7548854 GBP346_A3276 GBP346_A3277     TRUE 0.627 60.000 0.350 NA   NA
 7548854 7548855 GBP346_A3277 GBP346_A3278     TRUE 0.925 0.000 0.300 1.000 N NA
 7548855 7548856 GBP346_A3278 GBP346_A3279     TRUE 0.899 -3.000 0.200 1.000 N NA
 7548856 7548857 GBP346_A3279 GBP346_A3280     TRUE 0.944 2.000 0.169 0.069 N NA
 7548857 7548858 GBP346_A3280 GBP346_A3281   rfbD TRUE 0.913 27.000 0.074 1.000 Y NA
 7548858 7548859 GBP346_A3281 GBP346_A3282 rfbD rfbC TRUE 0.957 -3.000 0.074 1.000 Y NA
 7548859 7548860 GBP346_A3282 GBP346_A3283 rfbC rfbA TRUE 0.953 -15.000 0.500 1.000 Y NA
 7548860 7548861 GBP346_A3283 GBP346_A3284 rfbA rfbB TRUE 0.972 12.000 0.064 0.003 Y NA
 7548861 7548862 GBP346_A3284 GBP346_A3285 rfbB   FALSE 0.003 241.000 0.000 NA   NA
 7548864 7548865 GBP346_A3287 GBP346_A3288     TRUE 0.787 15.000 0.047 1.000 N NA
 7548865 7548866 GBP346_A3288 GBP346_A3289   pyrB_1 TRUE 0.942 92.000 0.452 1.000 Y NA
 7548866 7548867 GBP346_A3289 GBP346_A3290 pyrB_1   TRUE 0.938 27.000 0.247 1.000 Y NA
 7548867 7548868 GBP346_A3290 GBP346_A3291     TRUE 0.781 -13.000 0.109 1.000 N NA
 7548868 7548869 GBP346_A3291 GBP346_A3292     TRUE 0.865 -3.000 0.263 NA N NA
 7548869 7548870 GBP346_A3292 GBP346_A3293     FALSE 0.021 206.000 0.012 NA   NA
 7548870 7548871 GBP346_A3293 GBP346_A3294     FALSE 0.147 177.000 0.151 NA   NA
 7548873 7548874 GBP346_A3296 GBP346_A3297 groL_1 groS_1 TRUE 0.969 48.000 0.600 0.069 Y NA
 7548874 7548875 GBP346_A3297 GBP346_A3298 groS_1   FALSE 0.003 240.000 0.000 NA   NA
 7548875 7548876 GBP346_A3298 GBP346_A3299     FALSE 0.004 234.000 0.000 NA   NA
 7548878 7548879 GBP346_A3300 GBP346_A3302     FALSE 0.006 203.000 0.000 NA   NA
 7548884 7548885 GBP346_A3307 GBP346_A3309     TRUE 0.818 -3.000 0.500 NA   NA
 7548886 7548887 GBP346_A3308 GBP346_A3310     TRUE 0.681 116.000 0.875 NA   NA
 7548887 7548888 GBP346_A3310 GBP346_A3311     TRUE 0.753 30.000 1.000 NA   NA
 7548888 7548889 GBP346_A3311 GBP346_A3312     TRUE 0.737 60.000 0.875 NA   NA
 7548889 7548890 GBP346_A3312 GBP346_A3313     FALSE 0.000 535.000 0.000 NA   NA
 7548890 7548891 GBP346_A3313 GBP346_A3314     TRUE 0.655 74.000 0.500 NA   NA
 7548892 7548893 GBP346_A3315 GBP346_A3316     FALSE 0.209 181.000 0.113 1.000   NA
 7548893 7548894 GBP346_A3316 GBP346_A3317     TRUE 0.827 -3.000 0.205 1.000   NA
 7548894 7548895 GBP346_A3317 GBP346_A3318     FALSE 0.011 350.000 0.000 1.000   NA
 7548895 7548896 GBP346_A3318 GBP346_A3319     FALSE 0.017 464.000 0.000 1.000 N NA
 7548896 7548897 GBP346_A3319 GBP346_A3320     FALSE 0.454 130.000 0.089 1.000   NA
 7548897 7548898 GBP346_A3320 GBP346_A3321     FALSE 0.381 138.000 0.273 NA   NA
 7548898 7548899 GBP346_A3321 GBP346_A3322     FALSE 0.364 13.000 0.038 NA   NA
 7548900 7548901 GBP346_A3323 GBP346_A3324     TRUE 0.824 0.000 0.417 NA   NA
 7548903 7548904 GBP346_A3326 GBP346_A3327     TRUE 0.681 -3.000 0.154 NA   NA
 7548904 7548905 GBP346_A3327 GBP346_A3328     FALSE 0.003 257.000 0.000 NA   NA
 7548906 7548907 GBP346_A3329 GBP346_A3330     TRUE 0.708 98.000 0.867 NA   NA
 7548907 7548908 GBP346_A3330 GBP346_A3331     TRUE 0.864 74.000 0.688 1.000 N NA
 7548909 7548910 GBP346_A3332 GBP346_A3333     TRUE 0.978 -3.000 0.667 1.000 Y NA
 7548910 7548911 GBP346_A3333 GBP346_A3334     TRUE 0.939 -6.000 0.105 1.000 Y NA
 7548911 7548912 GBP346_A3334 GBP346_A3335     TRUE 0.945 42.000 0.421 1.000 Y NA
 7548914 7548915 GBP346_A3337 GBP346_A3338     FALSE 0.134 185.000 0.167 NA   NA
 7548915 7548916 GBP346_A3338 GBP346_A3339   xdhB FALSE 0.034 385.000 0.048 1.000 N NA
 7548916 7548917 GBP346_A3339 GBP346_A3340 xdhB xdhA TRUE 0.962 29.000 0.085 0.001 Y NA
 7548918 7548919 GBP346_A3341 GBP346_A3342     TRUE 0.682 82.000 0.667 NA   NA
 7548923 7548924 GBP346_A3346 GBP346_A3347     FALSE 0.000 562.000 0.000 NA   NA
 7548924 7548925 GBP346_A3347 GBP346_A3348     TRUE 0.709 47.000 0.049 1.000 N NA
 7548925 7548926 GBP346_A3348 GBP346_A3349   bluB FALSE 0.062 542.000 0.024 1.000 Y NA
 7548926 7548927 GBP346_A3349 GBP346_A3350 bluB   FALSE 0.491 116.000 0.031 NA N NA
 7548927 7548928 GBP346_A3350 GBP346_A3351     FALSE 0.258 285.000 0.233 NA Y NA
 7548929 7548930 GBP346_A3352 GBP346_A3353 fahA hmgA TRUE 0.972 -3.000 0.316 1.000 Y NA
 7548930 7548931 GBP346_A3353 GBP346_A3354 hmgA pcaK_1 TRUE 0.730 19.000 0.034 1.000 N NA
 7548931 7548932 GBP346_A3354 GBP346_A3355 pcaK_1   FALSE 0.529 -3.000 0.064 NA   NA
 7548932 7548933 GBP346_A3355 GBP346_A3356     TRUE 0.709 43.000 0.681 NA   NA
 7548933 7548934 GBP346_A3356 GBP346_A3357     TRUE 0.747 20.000 0.297 1.000   NA
 7548934 7548935 GBP346_A3357 GBP346_A3358     FALSE 0.380 83.000 0.095 NA   NA
 7548936 7548937 GBP346_A3359 GBP346_A3360     FALSE 0.047 87.000 0.000 NA   NA
 7548938 7548939 GBP346_A3361 GBP346_A3362     FALSE 0.040 349.000 0.206 1.000   NA
 7548942 7548943 GBP346_A3365 GBP346_A3366     FALSE 0.359 124.000 0.121 NA   NA
 7548943 7548944 GBP346_A3366 GBP346_A3367     FALSE 0.484 104.000 0.194 NA   NA
 7548945 7548946 GBP346_A3368 GBP346_A3369     FALSE 0.513 71.000 0.192 NA   NA
 7548946 7548947 GBP346_A3369 GBP346_A3370     TRUE 0.662 39.000 0.483 NA   NA
 7548947 7548948 GBP346_A3370 GBP346_A3371     TRUE 0.697 -3.000 0.172 NA   NA
 7548948 7548949 GBP346_A3371 GBP346_A3372     TRUE 0.602 30.000 0.278 NA   NA
 7548949 7548950 GBP346_A3372 GBP346_A3373   nrdR FALSE 0.138 186.000 0.012 NA N NA
 7548950 7548951 GBP346_A3373 GBP346_A3374 nrdR glyA_1 TRUE 0.781 7.000 0.069 NA N NA
 7548952 7548953 GBP346_A3375 GBP346_A3376     FALSE 0.055 174.000 0.029 NA   NA
 7548953 7548954 GBP346_A3376 GBP346_A3377   ybgC FALSE 0.511 97.000 0.058 1.000   NA
 7548954 7548955 GBP346_A3377 GBP346_A3378 ybgC tolQ FALSE 0.395 177.000 0.593 1.000   NA
 7548955 7548956 GBP346_A3378 GBP346_A3379 tolQ tolR TRUE 0.983 11.000 0.556 0.047 Y NA
 7548956 7548957 GBP346_A3379 GBP346_A3380 tolR tolA TRUE 0.927 -3.000 0.460 0.068   NA
 7548957 7548958 GBP346_A3380 GBP346_A3381 tolA tolB TRUE 0.819 106.000 0.215 0.005   NA
 7548958 7548959 GBP346_A3381 GBP346_A3382 tolB   TRUE 0.888 18.000 0.592 1.000 N NA
 7548959 7548960 GBP346_A3382 GBP346_A3383     TRUE 0.690 20.000 0.167 1.000   NA
 7548960 7548961 GBP346_A3383 GBP346_A3384     FALSE 0.050 69.000 0.000 NA   NA
 7548962 7548963 GBP346_A3385 GBP346_A3386     FALSE 0.523 130.000 0.444 NA   NA
 7548963 7548964 GBP346_A3386 GBP346_A3387     FALSE 0.002 262.000 0.000 NA   NA
 7548965 7548966 GBP346_A3388 GBP346_A3389 galU_2   FALSE 0.567 32.000 0.222 NA   NA
 7548967 7548968 GBP346_A3390 GBP346_A3391     FALSE 0.597 103.000 0.133 1.000   NA
 7548968 7548969 GBP346_A3391 GBP346_A3392   kdsA_2 TRUE 0.708 -3.000 0.048 1.000   NA
 7548969 7548970 GBP346_A3392 GBP346_A3393 kdsA_2   TRUE 0.929 85.000 0.011 0.015 Y NA
 7548970 7548971 GBP346_A3393 GBP346_A3394     TRUE 0.980 -3.000 0.160 0.015 Y NA
 7548971 7548972 GBP346_A3394 GBP346_A3395     TRUE 0.939 -3.000 0.750 1.000 N NA
 7548972 7548973 GBP346_A3395 GBP346_A3396     TRUE 0.869 2.000 0.300 1.000   NA
 7548973 7548974 GBP346_A3396 GBP346_A3397     TRUE 0.785 33.000 0.039 0.002   NA
 7548974 7548975 GBP346_A3397 GBP346_A3398     TRUE 0.755 61.000 0.092 0.068   NA
 7548975 7548976 GBP346_A3398 GBP346_A3399     TRUE 0.877 42.000 0.778 1.000 N NA
 7548976 7548977 GBP346_A3399 GBP346_A3400     TRUE 0.943 -3.000 0.889 1.000 N NA
 7548977 7548978 GBP346_A3400 GBP346_A3401     TRUE 0.972 -3.000 0.778 NA Y NA
 7548981 7548982 GBP346_A3404 GBP346_A3405     FALSE 0.011 171.000 0.000 NA   NA
 7548984 7548985 GBP346_A3407 GBP346_A3408     FALSE 0.189 197.000 0.444 NA   NA
 7548985 7548986 GBP346_A3408 GBP346_A3410     TRUE 0.660 42.000 0.471 NA   NA
 7548987 7548988 GBP346_A3409 GBP346_A3411     FALSE 0.321 106.000 0.074 NA   NA
 7548988 7548989 GBP346_A3411 GBP346_A3412     TRUE 0.854 9.000 0.370 1.000   NA
 7548989 7548990 GBP346_A3412 GBP346_A3413   lpxC_1 TRUE 0.674 65.000 0.019 1.000 N NA
 7548990 7548991 GBP346_A3413 GBP346_A3414 lpxC_1   TRUE 0.811 -3.000 0.007 1.000 N NA
 7548991 7548992 GBP346_A3414 GBP346_A3415     TRUE 0.877 3.000 0.078 1.000 N NA
 7548992 7548993 GBP346_A3415 GBP346_A3416     TRUE 0.936 2.000 0.392 0.044   NA
 7548993 7548994 GBP346_A3416 GBP346_A3417     TRUE 0.814 -3.000 0.176 1.000   NA
 7548994 7548995 GBP346_A3417 GBP346_A3418     FALSE 0.251 180.000 0.009 1.000 N NA
 7548995 7548996 GBP346_A3418 GBP346_A3419     TRUE 0.854 -3.000 0.063 1.000 N NA
 7548996 7548997 GBP346_A3419 GBP346_A3420     TRUE 0.903 2.000 0.154 1.000 N NA
 7548997 7548998 GBP346_A3420 GBP346_A3421     TRUE 0.802 -3.000 0.148 1.000   NA
 7548998 7548999 GBP346_A3421 GBP346_A3422     TRUE 0.783 16.000 0.275 1.000   NA
 7548999 7549000 GBP346_A3422 GBP346_A3423     TRUE 0.980 10.000 0.167 0.003 Y NA
 7549000 7549001 GBP346_A3423 GBP346_A3424     TRUE 0.743 -3.000 0.235 NA   NA
 7549001 7549002 GBP346_A3424 GBP346_A3425     FALSE 0.002 291.000 0.000 NA   NA
 7549002 7549003 GBP346_A3425 GBP346_A3426     TRUE 0.748 -3.000 0.250 NA   NA
 7549005 7549006 GBP346_A3427 GBP346_A3429     TRUE 0.842 95.000 0.364 0.015   NA
 7549006 7549007 GBP346_A3429 GBP346_A3430     FALSE 0.572 33.000 0.073 1.000   NA
 7549007 7549008 GBP346_A3430 GBP346_A3431     TRUE 0.984 -3.000 0.418 0.068 Y NA
 7549008 7549009 GBP346_A3431 GBP346_A3432     TRUE 0.969 7.000 0.639 NA Y NA
 7549009 7549010 GBP346_A3432 GBP346_A3433     TRUE 0.889 82.000 0.176 NA Y NA
 7549013 7549014 GBP346_A3436 GBP346_A3437     FALSE 0.113 399.000 0.056 1.000 Y NA
 7549016 7549017 GBP346_A3439 GBP346_A3440     FALSE 0.546 111.000 0.096 1.000   NA
 7549018 7549019 GBP346_A3441 GBP346_A3442     FALSE 0.327 84.000 0.069 NA   NA
 7549020 7549021 GBP346_A3443 GBP346_A3444 mutL miaA TRUE 0.939 -3.000 0.188 0.068 N NA
 7549022 7549023 GBP346_A3445 GBP346_A3446   purM FALSE 0.002 434.000 0.005 NA   NA
 7549024 7549025 GBP346_A3447 GBP346_A3448     TRUE 0.671 22.000 0.104 NA N NA
 7549025 7549026 GBP346_A3448 GBP346_A3449     TRUE 0.859 -3.000 0.071 1.000 N NA
 7549026 7549027 GBP346_A3449 GBP346_A3450   folK TRUE 0.814 37.000 0.234 1.000 N NA
 7549027 7549028 GBP346_A3450 GBP346_A3451 folK   TRUE 0.769 -9.000 0.063 1.000 N NA
 7549028 7549029 GBP346_A3451 GBP346_A3452   panB TRUE 0.715 65.000 0.055 1.000 N NA
 7549030 7549031 GBP346_A3453 GBP346_A3454   dnaJ TRUE 0.721 34.000 0.054 1.000 N NA
 7549033 7549034 GBP346_A3456 GBP346_A3457 dnaK   FALSE 0.086 136.000 0.012 NA   NA
 7549034 7549035 GBP346_A3457 GBP346_A3458   grpE FALSE 0.275 165.000 0.333 NA   NA
 7549037 7549038 GBP346_A3459 GBP346_A3461   hemH TRUE 0.843 6.000 0.035 1.000 N NA
 7549038 7549039 GBP346_A3461 GBP346_A3462 hemH hrcA FALSE 0.323 173.000 0.048 1.000 N NA
 7549040 7549041 GBP346_A3463 GBP346_A3464   recN TRUE 0.799 30.000 0.170 1.000 N NA
 7549043 7549044 GBP346_A3466 GBP346_A3467     TRUE 0.627 52.000 0.358 NA   NA
 7549044 7549045 GBP346_A3467 GBP346_A3468     FALSE 0.554 80.000 0.259 NA   NA
 7549045 7549046 GBP346_A3468 GBP346_A3469     FALSE 0.305 0.000 0.007 NA   NA
 7549046 7549047 GBP346_A3469 GBP346_A3470     TRUE 0.610 -3.000 0.100 NA   NA
 7549048 7549049 GBP346_A3471 GBP346_A3472     FALSE 0.431 112.000 0.028 1.000   NA
 7549050 7549051 GBP346_A3473 GBP346_A3474     TRUE 0.949 65.000 0.070 0.009 Y NA
 7549051 7549052 GBP346_A3474 GBP346_A3475   glcE TRUE 0.929 102.000 0.013 0.009 Y NA
 7549052 7549053 GBP346_A3475 GBP346_A3476 glcE   TRUE 0.970 7.000 0.017 0.024 Y NA
 7549053 7549054 GBP346_A3476 GBP346_A3477     FALSE 0.020 260.000 0.052 NA   NA
 7549054 7549055 GBP346_A3477 GBP346_A3478   proC TRUE 0.629 35.000 0.357 NA   NA
 7549056 7549057 GBP346_A3479 GBP346_A3480 phnE phnD TRUE 0.987 -3.000 0.330 0.001 Y NA
 7549057 7549058 GBP346_A3480 GBP346_A3481 phnD phnC TRUE 0.969 83.000 0.337 0.002 Y NA
 7549058 7549059 GBP346_A3481 GBP346_A3482 phnC phnM FALSE 0.392 234.000 0.059 1.000 Y NA
 7549059 7549060 GBP346_A3482 GBP346_A3483 phnM phnL TRUE 0.964 12.000 0.320 1.000 Y NA
 7549060 7549061 GBP346_A3483 GBP346_A3484 phnL phnK TRUE 0.988 9.000 0.859 0.016 Y NA
 7549061 7549062 GBP346_A3484 GBP346_A3485 phnK phnJ TRUE 0.981 -3.000 0.883 1.000 Y NA
 7549062 7549063 GBP346_A3485 GBP346_A3486 phnJ   TRUE 0.981 -3.000 0.880 1.000 Y NA
 7549063 7549064 GBP346_A3486 GBP346_A3487   phnH TRUE 0.986 -6.000 0.960 0.002 Y NA
 7549064 7549065 GBP346_A3487 GBP346_A3488 phnH phnG TRUE 0.991 -3.000 0.967 0.002 Y NA
 7549066 7549067 GBP346_A3489 GBP346_A3490 phnF   FALSE 0.456 -10.000 0.096 NA   NA
 7549067 7549068 GBP346_A3490 GBP346_A3491   phnN TRUE 0.767 -3.000 0.296 NA   NA
 7549069 7549070 GBP346_A3492 GBP346_A3493 ubiA   FALSE 0.007 526.000 0.000 NA N NA
 7549070 7549071 GBP346_A3493 GBP346_A3494     TRUE 0.631 74.000 0.429 NA   NA
 7549071 7549072 GBP346_A3494 GBP346_A3495     FALSE 0.168 113.000 0.021 NA   NA
 7549074 7549075 GBP346_A3497 GBP346_A3498   katG FALSE 0.043 108.000 0.000 NA   NA
 7549077 7549078 GBP346_A3500 GBP346_A3501   recG TRUE 0.840 136.000 0.117 1.000 Y NA
 7549079 7549080 GBP346_A3502 GBP346_A3503 queA tgt FALSE 0.541 293.000 0.360 0.001 Y NA
 7549080 7549081 GBP346_A3503 GBP346_A3504 tgt   FALSE 0.009 180.000 0.000 NA   NA
 7549081 7549082 GBP346_A3504 GBP346_A3505   yajC FALSE 0.048 91.000 0.000 NA   NA
 7549082 7549083 GBP346_A3505 GBP346_A3506 yajC   TRUE 0.854 107.000 0.083 NA Y NA
 7549083 7549084 GBP346_A3506 GBP346_A3507   secF TRUE 0.981 16.000 0.332 0.001 Y NA
 7549085 7549086 GBP346_A3508 GBP346_A3509     FALSE 0.596 29.000 0.267 NA   NA
 7549086 7549087 GBP346_A3509 GBP346_A3510     FALSE 0.528 67.000 0.200 NA   NA
 7549087 7549088 GBP346_A3510 GBP346_A3511     TRUE 0.662 12.000 0.200 NA   NA
 7549089 7549090 GBP346_A3512 GBP346_A3513     TRUE 0.683 66.000 0.571 NA   NA
 7549090 7549091 GBP346_A3513 GBP346_A3514     TRUE 0.818 -3.000 0.500 NA   NA
 7549091 7549092 GBP346_A3514 GBP346_A3515     TRUE 0.705 80.000 0.800 NA   NA
 7549092 7549093 GBP346_A3515 GBP346_A3516     TRUE 0.847 -3.000 0.733 NA   NA
 7549094 7549095 GBP346_A3517 GBP346_A3518     FALSE 0.057 21.000 0.000 NA   NA
 7549096 7549097 GBP346_A3519 GBP346_A3520     FALSE 0.539 169.000 0.016 NA Y NA
 7549097 7549098 GBP346_A3520 GBP346_A3521     FALSE 0.135 33.000 0.004 NA   NA
 7549100 7549101 GBP346_A3523 GBP346_A3524     FALSE 0.319 164.000 0.452 NA   NA
 7549102 7549103 GBP346_A3525 GBP346_A3526     FALSE 0.266 127.000 0.073 NA   NA
 7549103 7549104 GBP346_A3526 GBP346_A3527     TRUE 0.924 -3.000 0.144 0.001   NA
 7549104 7549105 GBP346_A3527 GBP346_A3528     TRUE 0.947 13.000 0.829 0.001   NA
 7549106 7549107 GBP346_A3529 GBP346_A3530   trmU TRUE 0.891 -3.000 0.158 1.000 N NA
 7549107 7549108 GBP346_A3530 GBP346_A3531 trmU   TRUE 0.603 122.000 0.021 1.000 N NA
 7549109 7549110 GBP346_A3532 GBP346_A3533     FALSE 0.224 46.000 0.027 NA   NA
 7549111 7549112 GBP346_A3534 GBP346_A3535 pepP   TRUE 0.922 -3.000 0.396 1.000 N NA
 7549112 7549113 GBP346_A3535 GBP346_A3536     FALSE 0.330 208.000 0.019 0.009 N NA
 7549113 7549114 GBP346_A3536 GBP346_A3537     TRUE 0.891 -3.000 0.161 1.000 N NA
 7549114 7549115 GBP346_A3537 GBP346_A3539   purH TRUE 0.754 45.000 0.101 1.000 N NA
 7549117 7549118 GBP346_A3540 GBP346_A3541 ruvC ruvA TRUE 0.969 74.000 0.451 0.008 Y NA
 7549118 7549119 GBP346_A3541 GBP346_A3542 ruvA ruvB TRUE 0.905 168.000 0.549 0.001 Y NA
 7549119 7549120 GBP346_A3542 GBP346_A3543 ruvB   FALSE 0.186 26.000 0.014 NA   NA
 7549120 7549121 GBP346_A3543 GBP346_A3544     FALSE 0.298 132.000 0.118 NA   NA
 7549122 7549123 GBP346_A3545 GBP346_A3546   dtd TRUE 0.682 35.000 0.021 1.000 N NA
 7549123 7549124 GBP346_A3546 GBP346_A3547 dtd tyrS TRUE 0.953 17.000 0.026 0.025 Y NA
 7549126 7549127 GBP346_A3549 GBP346_A3550     TRUE 0.987 5.000 0.229 0.002 Y NA
 7549129 7549130 GBP346_A3552 GBP346_A3553     FALSE 0.031 130.000 0.000 NA   NA
 7549130 7549131 GBP346_A3553 GBP346_A3554   rpsI FALSE 0.015 207.000 0.003 NA   NA
 7549131 7549132 GBP346_A3554 GBP346_A3555 rpsI rplM TRUE 0.984 12.000 0.601 0.010 Y NA
 7549133 7549134 GBP346_A3556 GBP346_A3557     FALSE 0.042 160.000 0.006 NA   NA
 7549135 7549136 GBP346_A3558 GBP346_A3559     FALSE 0.005 211.000 0.000 NA   NA
 7549136 7549137 GBP346_A3559 GBP346_A3560   pyrC FALSE 0.274 77.000 0.048 NA   NA
 7549137 7549138 GBP346_A3560 GBP346_A3561 pyrC   FALSE 0.286 -3.000 0.009 NA   NA
 7549140 7549141 GBP346_A3563 GBP346_A3564     FALSE 0.490 122.000 0.250 NA   NA
 7549141 7549142 GBP346_A3564 GBP346_A3565     FALSE 0.001 493.000 0.000 NA   NA
 7549142 7549143 GBP346_A3565 GBP346_A3566     TRUE 0.938 66.000 0.778 NA Y NA
 7549143 7549144 GBP346_A3566 GBP346_A3567     FALSE 0.369 136.000 0.222 NA   NA
 7549145 7549146 GBP346_A3568 GBP346_A3569 groS_2 groL_2 TRUE 0.966 107.000 0.733 0.067 Y NA
 7549146 7549147 GBP346_A3569 GBP346_A3570 groL_2   FALSE 0.573 18.000 0.182 NA   NA
 7549147 7549148 GBP346_A3570 GBP346_A3571     TRUE 0.719 -9.000 0.500 NA   NA
 7549149 7549150 GBP346_A3572 GBP346_A3573   gltL_2 FALSE 0.355 150.000 0.000 1.000 N NA
 7549150 7549151 GBP346_A3573 GBP346_A3574 gltL_2   TRUE 0.968 -3.000 0.207 1.000 Y NA
 7549151 7549152 GBP346_A3574 GBP346_A3575     TRUE 0.991 0.000 0.933 0.008 Y NA
 7549152 7549153 GBP346_A3575 GBP346_A3576     TRUE 0.958 83.000 0.267 0.038 Y NA
 7549153 7549154 GBP346_A3576 GBP346_A3577     TRUE 0.787 140.000 0.044 1.000 Y NA
 7549156 7549157 GBP346_A3579 GBP346_A3580     FALSE 0.012 167.000 0.000 NA   NA
 7549158 7549159 GBP346_A3581 GBP346_A3582   purB FALSE 0.453 108.000 0.005 NA N NA
 7549160 7549161 GBP346_A3583 GBP346_A3584 aroK_1   TRUE 0.963 14.000 0.370 1.000 Y NA
 7549163 7549164 GBP346_A3586 GBP346_A3587   edd TRUE 0.953 22.000 0.523 1.000 Y NA
 7549165 7549166 GBP346_A3588 GBP346_A3589     FALSE 0.038 121.000 0.000 NA   NA
 7549166 7549167 GBP346_A3589 GBP346_A3591     FALSE 0.473 94.000 0.158 NA   NA
 7549168 7549169 GBP346_A3590 GBP346_A3592   proA FALSE 0.276 18.000 0.028 NA   NA
 7549169 7549170 GBP346_A3592 GBP346_A3593 proA holA FALSE 0.520 137.000 0.047 1.000 N NA
 7549170 7549171 GBP346_A3593 GBP346_A3594 holA   TRUE 0.712 46.000 0.199 NA N NA
 7549171 7549172 GBP346_A3594 GBP346_A3595   leuS TRUE 0.708 42.000 0.182 NA N NA
 7549172 7549173 GBP346_A3595 GBP346_A3596 leuS   FALSE 0.267 175.000 0.007 1.000 N NA
 7549173 7549174 GBP346_A3596 GBP346_A3597     TRUE 0.966 41.000 0.400 0.047 Y NA
 7549174 7549175 GBP346_A3597 GBP346_A3598   dapB TRUE 0.701 29.000 0.029 1.000 N NA
 7549175 7549176 GBP346_A3598 GBP346_A3599 dapB   TRUE 0.701 71.000 0.049 1.000 N NA
 7549178 7549179 GBP346_A3601 GBP346_A3602 allA_2 alc TRUE 0.974 14.000 1.000 1.000 Y NA
 7549179 7549180 GBP346_A3602 GBP346_A3603 alc   TRUE 0.728 75.000 0.082 1.000 N NA
 7549181 7549182 GBP346_A3604 GBP346_A3605     FALSE 0.002 272.000 0.000 NA   NA
 7549184 7549185 GBP346_A3607 GBP346_A3608   cynS TRUE 0.902 87.000 0.075 1.000 Y NA
 7549185 7549186 GBP346_A3608 GBP346_A3609 cynS   FALSE 0.168 182.000 0.032 NA N NA
 7549186 7549187 GBP346_A3609 GBP346_A3610     FALSE 0.599 30.000 0.273 NA   NA
 7549188 7549189 GBP346_A3611 GBP346_A3612 gap tkt TRUE 0.924 91.000 0.198 1.000 Y NA
 7549189 7549190 GBP346_A3612 GBP346_A3613 tkt   FALSE 0.412 92.000 0.111 NA   NA
 7549191 7549192 GBP346_A3614 GBP346_A3615 speE   TRUE 0.779 40.000 0.560 1.000   NA
 7549192 7549193 GBP346_A3615 GBP346_A3616     FALSE 0.585 -3.000 0.087 NA   NA
 7549194 7549195 GBP346_A3617 GBP346_A3618     FALSE 0.220 83.000 0.031 NA   NA
 7549195 7549196 GBP346_A3618 GBP346_A3619     TRUE 0.702 17.000 0.381 NA   NA
 7549196 7549197 GBP346_A3619 GBP346_A3620     FALSE 0.062 329.000 0.098 1.000 N NA
 7549198 7549199 GBP346_A3621 GBP346_A3622 thiL   TRUE 0.699 -10.000 0.005 1.000 N NA
 7549199 7549200 GBP346_A3622 GBP346_A3623     FALSE 0.475 44.000 0.141 NA   NA
 7549201 7549202 GBP346_A3624 GBP346_A3625   pyrF FALSE 0.130 97.000 0.007 NA   NA
 7549202 7549203 GBP346_A3625 GBP346_A3626 pyrF   TRUE 0.655 97.000 0.022 1.000 N NA
 7549203 7549204 GBP346_A3626 GBP346_A3627     TRUE 0.785 47.000 0.158 1.000 N NA
 7549204 7549205 GBP346_A3627 GBP346_A3628     TRUE 0.722 39.000 0.059 1.000 N NA
 7549205 7549206 GBP346_A3628 GBP346_A3629     TRUE 0.936 115.000 0.510 1.000 Y NA
 7549206 7549207 GBP346_A3629 GBP346_A3630     TRUE 0.936 89.000 0.857 NA Y NA
 7549207 7549208 GBP346_A3630 GBP346_A3631     TRUE 0.633 130.000 0.273 NA N NA
 7549208 7549209 GBP346_A3631 GBP346_A3632     TRUE 0.936 -3.000 0.133 0.043 N NA
 7549209 7549210 GBP346_A3632 GBP346_A3633     TRUE 0.915 38.000 0.096 1.000 Y NA
 7549210 7549211 GBP346_A3633 GBP346_A3634     TRUE 0.911 -3.000 0.276 1.000 N NA
 7549211 7549212 GBP346_A3634 GBP346_A3635     FALSE 0.005 208.000 0.000 NA   NA
 7549214 7549215 GBP346_A3636 GBP346_A3638     FALSE 0.005 208.000 0.000 NA   NA
 7549215 7549216 GBP346_A3638 GBP346_A3639   mtgA FALSE 0.047 94.000 0.000 NA   NA
 7549216 7549217 GBP346_A3639 GBP346_A3640 mtgA aroE TRUE 0.633 21.000 0.107 1.000   NA
 7549217 7549218 GBP346_A3640 GBP346_A3641 aroE   TRUE 0.834 -3.000 0.034 1.000 N NA
 7549218 7549219 GBP346_A3641 GBP346_A3642     FALSE 0.246 21.000 0.027 NA   NA
 7549219 7549220 GBP346_A3642 GBP346_A3643     FALSE 0.058 -13.000 0.000 NA   NA
 7549220 7549221 GBP346_A3643 GBP346_A3644   mpl FALSE 0.270 -3.000 0.007 NA   NA
 7549222 7549223 GBP346_A3645 GBP346_A3646     TRUE 0.656 -7.000 0.280 NA   NA
 7549223 7549224 GBP346_A3646 GBP346_A3647   aroQ_1 TRUE 0.703 61.000 0.041 1.000 N NA
 7549224 7549225 GBP346_A3647 GBP346_A3648 aroQ_1 accB TRUE 0.813 68.000 0.254 1.000 N NA
 7549225 7549226 GBP346_A3648 GBP346_A3649 accB accC_1 TRUE 0.970 85.000 0.275 0.000 Y NA
 7549226 7549227 GBP346_A3649 GBP346_A3650 accC_1 prmA TRUE 0.889 -3.000 0.152 1.000 N NA
 7549227 7549228 GBP346_A3650 GBP346_A3651 prmA   FALSE 0.315 48.000 0.058 NA   NA
 7549228 7549229 GBP346_A3651 GBP346_A3652     FALSE 0.159 68.000 0.011 NA   NA
 7549229 7549230 GBP346_A3652 GBP346_A3653     TRUE 0.673 101.000 0.045 1.000 N NA
 7549230 7549231 GBP346_A3653 GBP346_A3654     FALSE 0.584 24.000 0.040 NA N NA
 7549234 7549235 GBP346_A3657 GBP346_A3658     FALSE 0.419 368.000 0.564 0.000 Y NA
 7549237 7549238 GBP346_A3660 GBP346_A3661     FALSE 0.343 -3.000 0.017 NA   NA
 7549238 7549239 GBP346_A3661 GBP346_A3662     FALSE 0.230 14.000 0.010 NA   NA
 7549240 7549241 GBP346_A3663 GBP346_A3664 ffh   TRUE 0.648 98.000 0.018 1.000 N NA
 7549241 7549242 GBP346_A3664 GBP346_A3666     FALSE 0.211 90.000 0.027 NA   NA
 7549243 7549244 GBP346_A3665 GBP346_A3667   proS FALSE 0.541 32.000 0.018 NA N NA
 7549245 7549246 GBP346_A3668 GBP346_A3669     FALSE 0.346 86.000 0.075 NA   NA
 7549247 7549248 GBP346_A3670 GBP346_A3671   proB FALSE 0.200 12.000 0.003 NA   NA
 7549248 7549249 GBP346_A3671 GBP346_A3672 proB cgtA TRUE 0.663 85.000 0.206 1.000   NA
 7549251 7549252 GBP346_A3674 GBP346_A3675 rpmA rplU TRUE 0.976 29.000 0.667 0.009 Y NA
 7549253 7549254 GBP346_A3676 GBP346_A3677 ispB   FALSE 0.052 41.000 0.000 NA   NA
 7549254 7549255 GBP346_A3677 GBP346_A3678     FALSE 0.014 163.000 0.000 NA   NA
 7549255 7549256 GBP346_A3678 GBP346_A3679     FALSE 0.406 136.000 0.056 NA N NA
 7549256 7549257 GBP346_A3679 GBP346_A3680     TRUE 0.952 -3.000 0.048 1.000 Y NA
 7549257 7549258 GBP346_A3680 GBP346_A3681   pilD TRUE 0.946 45.000 0.454 1.000 Y NA
 7549258 7549259 GBP346_A3681 GBP346_A3682 pilD coaE TRUE 0.892 4.000 0.122 1.000 N NA
 7549259 7549260 GBP346_A3682 GBP346_A3683 coaE   FALSE 0.204 149.000 0.110 NA   NA
 7549260 7549261 GBP346_A3683 GBP346_A3684     TRUE 0.628 36.000 0.356 NA   NA
 7549262 7549263 GBP346_A3685 GBP346_A3686     TRUE 0.773 -3.000 0.105 1.000   NA
 7549263 7549264 GBP346_A3686 GBP346_A3687   argJ FALSE 0.563 21.000 0.056 1.000   NA
 7549264 7549265 GBP346_A3687 GBP346_A3688 argJ secA TRUE 0.888 2.000 0.102 1.000 N NA
 7549266 7549267 GBP346_A3689 GBP346_A3690     FALSE 0.133 -34.000 0.006 NA   NA
 7549268 7549269 GBP346_A3691 GBP346_A3692 lpxC_2   FALSE 0.100 242.000 0.012 1.000 N NA
 7549269 7549270 GBP346_A3692 GBP346_A3693   ftsZ TRUE 0.674 48.000 0.018 1.000 N NA
 7549270 7549271 GBP346_A3693 GBP346_A3694 ftsZ ftsA TRUE 0.936 109.000 0.460 1.000 Y NA
 7549271 7549272 GBP346_A3694 GBP346_A3695 ftsA   TRUE 0.785 27.000 0.389 NA N NA
 7549272 7549273 GBP346_A3695 GBP346_A3696     TRUE 0.928 21.000 0.372 NA Y NA
 7549273 7549274 GBP346_A3696 GBP346_A3697   murC TRUE 0.985 2.000 0.153 0.003 Y NA
 7549274 7549275 GBP346_A3697 GBP346_A3698 murC murG TRUE 0.971 -3.000 0.283 1.000 Y NA
 7549275 7549276 GBP346_A3698 GBP346_A3699 murG ftsW TRUE 0.824 122.000 0.647 1.000 N NA
 7549276 7549277 GBP346_A3699 GBP346_A3700 ftsW murD TRUE 0.961 -3.000 0.297 0.002 N NA
 7549277 7549278 GBP346_A3700 GBP346_A3701 murD mraY TRUE 0.985 14.000 0.647 0.003 Y NA
 7549278 7549279 GBP346_A3701 GBP346_A3702 mraY   TRUE 0.980 15.000 0.309 0.003 Y NA
 7549279 7549280 GBP346_A3702 GBP346_A3703     TRUE 0.989 -3.000 0.569 0.002 Y NA
 7549280 7549281 GBP346_A3703 GBP346_A3704     TRUE 0.959 -3.000 0.089 1.000 Y NA
 7549281 7549282 GBP346_A3704 GBP346_A3705   ftsL TRUE 0.879 -3.000 0.119 1.000 N NA
 7549282 7549283 GBP346_A3705 GBP346_A3706 ftsL mraW TRUE 0.817 -3.000 0.013 1.000 N NA
 7549283 7549284 GBP346_A3706 GBP346_A3707 mraW mraZ TRUE 0.711 24.000 0.635 NA   NA
 7549284 7549285 GBP346_A3707 GBP346_A3708 mraZ   FALSE 0.001 388.000 0.000 NA   NA
 7549287 7549288 GBP346_A3710 GBP346_A3711     FALSE 0.580 140.000 0.123 1.000 N NA
 7549290 7549291 GBP346_A3713 GBP346_A4281 rrf_2 rrl_2 FALSE 0.008 184.000 0.000 NA   NA
 7549291 7549292 GBP346_A4281 GBP346_A3714 rrl_2   FALSE 0.001 392.000 0.000 NA   NA
 7549292 7549293 GBP346_A3714 GBP346_A3715     FALSE 0.053 34.000 0.000 NA   NA
 7549293 7549294 GBP346_A3715 GBP346_A3716   rrs_2 FALSE 0.047 83.000 0.000 NA   NA
 7549294 7549295 GBP346_A3716 GBP346_A3717 rrs_2   FALSE 0.051 65.000 0.000 NA   NA
 7549298 7549299 GBP346_A3720 GBP346_A3721 paaN pcaF_1 TRUE 0.683 74.000 0.036 1.000 N NA
 7549299 7549300 GBP346_A3721 GBP346_A3722 pcaF_1 paaB TRUE 0.881 96.000 0.025 1.000 Y NA
 7549300 7549301 GBP346_A3722 GBP346_A3723 paaB paaD TRUE 0.701 86.000 0.204 NA N NA
 7549301 7549302 GBP346_A3723 GBP346_A3724 paaD paaF TRUE 0.638 38.000 0.088 NA N NA
 7549303 7549304 GBP346_A3725 GBP346_A3726 mltA apaG TRUE 0.609 58.000 0.063 NA N NA
 7549305 7549306 GBP346_A3728 GBP346_A3729 rpe gph_2 TRUE 0.820 -3.000 0.192 1.000   NA
 7549306 7549307 GBP346_A3729 GBP346_A3730 gph_2 trpE FALSE 0.073 288.000 0.233 1.000   NA
 7549307 7549308 GBP346_A3730 GBP346_A3731 trpE   TRUE 0.981 14.000 0.230 0.000 Y NA
 7549308 7549309 GBP346_A3731 GBP346_A3732   trpD TRUE 0.932 18.000 0.105 1.000 Y NA
 7549309 7549310 GBP346_A3732 GBP346_A3733 trpD trpC TRUE 0.939 63.000 0.293 1.000 Y NA
 7549310 7549311 GBP346_A3733 GBP346_A3734 trpC   TRUE 0.676 11.000 0.054 1.000   NA
 7549311 7549312 GBP346_A3734 GBP346_A3735   ung TRUE 0.704 42.000 0.250 1.000   NA
 7549313 7549314 GBP346_A3736 GBP346_A3737     FALSE 0.597 22.000 0.081 1.000   NA
 7549314 7549315 GBP346_A3737 GBP346_A3738     TRUE 0.631 100.000 0.174 1.000   NA
 7549315 7549316 GBP346_A3738 GBP346_A3739     TRUE 0.861 102.000 0.814 1.000 N NA
 7549316 7549317 GBP346_A3739 GBP346_A3740     FALSE 0.245 47.000 0.034 NA   NA
 7549318 7549319 GBP346_A3741 GBP346_A3742     FALSE 0.000 505.000 0.000 NA   NA
 7549319 7549320 GBP346_A3742 GBP346_A3743     FALSE 0.436 105.000 0.143 NA   NA
 7549320 7549321 GBP346_A3743 GBP346_A3744     FALSE 0.028 132.000 0.000 NA   NA
 7549321 7549322 GBP346_A3744 GBP346_A3745   ychF FALSE 0.138 24.000 0.004 NA   NA
 7549324 7549325 GBP346_A3747 GBP346_A3748     TRUE 0.787 14.000 0.038 1.000 N NA
 7549326 7549327 GBP346_A3749 GBP346_A3750 gabP   FALSE 0.394 145.000 0.400 NA   NA
 7549327 7549328 GBP346_A3750 GBP346_A3751     TRUE 0.793 -7.000 1.000 NA   NA
 7549331 7549332 GBP346_A3754 GBP346_A3755     FALSE 0.006 287.000 0.005 NA   NA
 7549333 7549334 GBP346_A3756 GBP346_A3757     TRUE 0.806 -3.000 0.156 1.000   NA
 7549334 7549335 GBP346_A3757 GBP346_A3758     TRUE 0.824 24.000 0.059 0.000   NA
 7549335 7549336 GBP346_A3758 GBP346_A3759     FALSE 0.479 -30.000 0.029 1.000   NA
 7549336 7549337 GBP346_A3759 GBP346_A3760     FALSE 0.472 19.000 0.109 NA   NA
 7549337 7549338 GBP346_A3760 GBP346_A3761     FALSE 0.107 -3.000 0.000 NA   NA
 7549339 7549340 GBP346_A3762 GBP346_A3763   hemA FALSE 0.209 12.000 0.005 NA   NA
 7549340 7549341 GBP346_A3763 GBP346_A3764 hemA prfA TRUE 0.878 67.000 0.171 0.024 N NA
 7549341 7549342 GBP346_A3764 GBP346_A3765 prfA hemK TRUE 0.934 44.000 0.229 1.000 Y NA
 7549342 7549343 GBP346_A3765 GBP346_A3766 hemK   TRUE 0.751 80.000 0.124 1.000 N NA
 7549343 7549344 GBP346_A3766 GBP346_A3767     TRUE 0.863 15.000 0.211 1.000 N NA
 7549344 7549345 GBP346_A3767 GBP346_A3768     FALSE 0.035 284.000 0.039 1.000   NA
 7549347 7549348 GBP346_A3770 GBP346_A3771     FALSE 0.002 302.000 0.000 NA   NA
 7549349 7549350 GBP346_A3772 GBP346_A3773     FALSE 0.014 646.000 0.014 1.000 N NA
 7549353 7549354 GBP346_A3776 GBP346_A3777     FALSE 0.007 338.000 0.041 NA   NA
 7549355 7549356 GBP346_A3778 GBP346_A3779     FALSE 0.188 128.000 0.042 NA   NA
 7549361 7549362 GBP346_A3784 GBP346_A3786     FALSE 0.002 297.000 0.000 NA   NA
 7549363 7549364 GBP346_A3785 GBP346_A3787     FALSE 0.001 407.000 0.000 NA   NA
 7549365 7549366 GBP346_A3788 GBP346_A3789     FALSE 0.597 59.000 0.286 NA   NA
 7549366 7549367 GBP346_A3789 GBP346_A3790     TRUE 0.710 103.000 1.000 NA   NA
 7549369 7549370 GBP346_A3792 GBP346_A3793     TRUE 0.973 15.000 1.000 1.000 Y NA
 7549370 7549371 GBP346_A3793 GBP346_A3794     TRUE 0.967 -3.000 0.875 0.046 N NA
 7549371 7549372 GBP346_A3794 GBP346_A3795     TRUE 0.652 -15.000 0.375 NA   NA
 7549374 7549375 GBP346_A3797 GBP346_A3798     FALSE 0.470 29.000 0.125 NA   NA
 7549375 7549376 GBP346_A3798 GBP346_A3799     TRUE 0.723 -15.000 0.667 NA   NA
 7549376 7549377 GBP346_A3799 GBP346_A3800   icmF_1 FALSE 0.601 8.000 0.100 NA   NA
 7549377 7549378 GBP346_A3800 GBP346_A3801 icmF_1   TRUE 0.849 -3.000 0.750 NA   NA
 7549378 7549379 GBP346_A3801 GBP346_A3802     TRUE 0.778 5.000 0.281 NA   NA
 7549380 7549381 GBP346_A3803 GBP346_A3804   clpV_1 FALSE 0.533 90.000 0.221 NA   NA
 7549381 7549382 GBP346_A3804 GBP346_A3805 clpV_1   TRUE 0.642 34.000 0.395 NA   NA
 7549382 7549383 GBP346_A3805 GBP346_A3806   vasA_3 FALSE 0.573 -36.000 0.292 NA   NA
 7549383 7549384 GBP346_A3806 GBP346_A3807 vasA_3   FALSE 0.417 79.000 0.117 NA   NA
 7549384 7549385 GBP346_A3807 GBP346_A3808     TRUE 0.628 58.000 0.350 NA   NA
 7549385 7549386 GBP346_A3808 GBP346_A3809     TRUE 0.642 73.000 0.458 NA   NA
 7549386 7549387 GBP346_A3809 GBP346_A3810     TRUE 0.792 17.000 0.920 NA   NA
 7549387 7549388 GBP346_A3810 GBP346_A3811     FALSE 0.448 37.000 0.120 NA   NA
 7549388 7549389 GBP346_A3811 GBP346_A3812     FALSE 0.533 94.000 0.222 NA   NA
 7549390 7549391 GBP346_A3813 GBP346_A3814     TRUE 0.720 49.000 0.769 NA   NA
 7549391 7549392 GBP346_A3814 GBP346_A3815     TRUE 0.838 -3.000 0.649 NA   NA
 7549392 7549393 GBP346_A3815 GBP346_A3816     FALSE 0.388 102.000 0.108 NA   NA
 7549394 7549395 GBP346_A3817 GBP346_A3818     TRUE 0.698 85.000 0.750 NA   NA
 7549395 7549396 GBP346_A3818 GBP346_A3819     TRUE 0.729 -7.000 0.500 NA   NA
 7549397 7549398 GBP346_A3820 GBP346_A3821     FALSE 0.107 -3.000 0.000 NA   NA
 7549398 7549399 GBP346_A3821 GBP346_A3822     FALSE 0.000 943.000 0.000 NA   NA
 7549401 7549402 GBP346_A3824 GBP346_A3825     TRUE 0.818 -3.000 0.500 NA   NA
 7549403 7549404 GBP346_A3826 GBP346_A3827     TRUE 0.841 -3.000 0.667 NA   NA
 7549406 7549407 GBP346_A3829 GBP346_A3830   sspB FALSE 0.057 21.000 0.000 NA   NA
 7549407 7549408 GBP346_A3830 GBP346_A3831 sspB   TRUE 0.722 70.000 0.831 NA   NA
 7549408 7549409 GBP346_A3831 GBP346_A3832     TRUE 0.756 93.000 0.370 NA N NA
 7549409 7549410 GBP346_A3832 GBP346_A3833   petB TRUE 0.980 23.000 0.630 0.001 Y NA
 7549410 7549411 GBP346_A3833 GBP346_A3834 petB petA TRUE 0.985 1.000 0.108 0.001 Y NA
 7549411 7549412 GBP346_A3834 GBP346_A3835 petA   FALSE 0.016 221.000 0.013 NA   NA
 7549413 7549414 GBP346_A3836 GBP346_A3837     FALSE 0.044 102.000 0.000 NA   NA
 7549415 7549416 GBP346_A3838 GBP346_A3839 tatC   TRUE 0.898 39.000 0.167 NA Y NA
 7549416 7549417 GBP346_A3839 GBP346_A3840     TRUE 0.973 27.000 0.402 0.005 Y NA
 7549417 7549418 GBP346_A3840 GBP346_A3841     TRUE 0.725 89.000 0.080 1.000 N NA
 7549418 7549419 GBP346_A3841 GBP346_A3842     FALSE 0.267 29.000 0.037 NA   NA
 7549419 7549420 GBP346_A3842 GBP346_A3843   hisE FALSE 0.353 53.000 0.070 NA   NA
 7549420 7549421 GBP346_A3843 GBP346_A3844 hisE hisI TRUE 0.982 -3.000 0.152 0.003 Y NA
 7549421 7549422 GBP346_A3844 GBP346_A3845 hisI hisF TRUE 0.989 0.000 0.430 0.003 Y NA
 7549422 7549423 GBP346_A3845 GBP346_A3846 hisF hisA TRUE 0.972 68.000 0.433 0.003 Y NA
 7549423 7549424 GBP346_A3846 GBP346_A3847 hisA hisH TRUE 0.839 168.000 0.120 0.003 Y NA
 7549424 7549425 GBP346_A3847 GBP346_A3848 hisH   TRUE 0.784 -3.000 0.074 NA N NA
 7549425 7549426 GBP346_A3848 GBP346_A3849   hisB FALSE 0.537 56.000 0.020 NA N NA
 7549426 7549427 GBP346_A3849 GBP346_A3850 hisB hisC_2 TRUE 0.970 64.000 0.341 0.003 Y NA
 7549427 7549428 GBP346_A3850 GBP346_A3851 hisC_2 hisD TRUE 0.879 156.000 0.165 0.003 Y NA
 7549428 7549429 GBP346_A3851 GBP346_A3852 hisD hisG TRUE 0.968 42.000 0.254 0.003 Y NA
 7549429 7549430 GBP346_A3852 GBP346_A3853 hisG murA TRUE 0.880 -3.000 0.123 1.000 N NA
 7549430 7549431 GBP346_A3853 GBP346_A3854 murA   TRUE 0.768 14.000 0.129 NA N NA
 7549431 7549432 GBP346_A3854 GBP346_A3855     FALSE 0.570 86.000 0.055 NA N NA
 7549432 7549433 GBP346_A3855 GBP346_A3856     TRUE 0.936 -3.000 0.160 0.065 N NA
 7549433 7549434 GBP346_A3856 GBP346_A3857     FALSE 0.031 296.000 0.174 NA   NA
 7549434 7549435 GBP346_A3857 GBP346_A3858     FALSE 0.530 -3.000 0.064 NA   NA
 7549435 7549436 GBP346_A3858 GBP346_A3859     TRUE 0.782 115.000 0.733 NA N NA
 7549436 7549437 GBP346_A3859 GBP346_A3860     FALSE 0.478 -3.000 0.049 NA   NA
 7549437 7549438 GBP346_A3860 GBP346_A3861     TRUE 0.781 13.000 0.562 NA   NA
 7549438 7549439 GBP346_A3861 GBP346_A3862     TRUE 0.967 -3.000 0.530 NA Y NA
 7549439 7549440 GBP346_A3862 GBP346_A3863     TRUE 0.701 100.000 0.069 1.000 N NA
 7549440 7549441 GBP346_A3863 GBP346_A3864   thiG TRUE 0.982 -3.000 0.118 0.002 Y NA
 7549441 7549442 GBP346_A3864 GBP346_A3865 thiG thiS TRUE 0.907 53.000 0.064 1.000 Y NA
 7549442 7549443 GBP346_A3865 GBP346_A3866 thiS   TRUE 0.834 49.000 0.342 1.000 N NA
 7549443 7549444 GBP346_A3866 GBP346_A3867     FALSE 0.497 -3.000 0.054 NA   NA
 7549445 7549446 GBP346_A3869 GBP346_A3870     FALSE 0.309 -57.000 0.071 NA   NA
 7549446 7549447 GBP346_A3870 GBP346_A3871     FALSE 0.454 -10.000 0.095 NA   NA
 7549448 7549449 GBP346_A3872 GBP346_A3873     TRUE 0.821 -3.000 0.016 1.000 N NA
 7549449 7549450 GBP346_A3873 GBP346_A3874     FALSE 0.205 281.000 0.000 1.000 Y NA
 7549450 7549451 GBP346_A3874 GBP346_A3875   gltB TRUE 0.968 94.000 0.236 0.000 Y NA
 7549451 7549452 GBP346_A3875 GBP346_A3876 gltB   FALSE 0.065 291.000 0.022 1.000 N NA
 7549454 7549455 GBP346_A3878 GBP346_A3879     TRUE 0.682 45.000 0.024 1.000 N NA
 7549455 7549456 GBP346_A3879 GBP346_A3880     TRUE 0.965 26.000 0.272 0.037 Y NA
 7549456 7549457 GBP346_A3880 GBP346_A3881     TRUE 0.983 -3.000 0.306 0.037 Y NA
 7549457 7549458 GBP346_A3881 GBP346_A3882     TRUE 0.974 47.000 0.793 0.037 Y NA
 7549458 7549459 GBP346_A3882 GBP346_A3883     TRUE 0.695 85.000 0.053 1.000 N NA
 7549459 7549460 GBP346_A3883 GBP346_A3884   aroB TRUE 0.721 49.000 0.060 1.000 N NA
 7549460 7549461 GBP346_A3884 GBP346_A3885 aroB aroK_2 TRUE 0.968 -3.000 0.208 1.000 Y NA
 7549461 7549462 GBP346_A3885 GBP346_A3886 aroK_2 pilQ TRUE 0.861 6.000 0.319 1.000   NA
 7549462 7549463 GBP346_A3886 GBP346_A3887 pilQ   FALSE 0.200 66.000 0.021 NA   NA
 7549463 7549464 GBP346_A3887 GBP346_A3888     FALSE 0.356 -3.000 0.020 NA   NA
 7549464 7549465 GBP346_A3888 GBP346_A3889     TRUE 0.966 9.000 0.616 NA Y NA
 7549468 7549469 GBP346_A3892 GBP346_A3893   lysA FALSE 0.244 11.000 0.008 NA   NA
 7549470 7549471 GBP346_A3894 GBP346_A3895     FALSE 0.159 33.000 0.009 NA   NA
 7549471 7549472 GBP346_A3895 GBP346_A3896     TRUE 0.939 10.000 0.790 0.036   NA
 7549472 7549473 GBP346_A3896 GBP346_A3897     FALSE 0.206 178.000 0.097 1.000   NA
 7549473 7549474 GBP346_A3897 GBP346_A3898     TRUE 0.966 5.000 0.399 NA Y NA
 7549474 7549475 GBP346_A3898 GBP346_A3899     FALSE 0.506 131.000 0.097 NA N NA
 7549476 7549477 GBP346_A3900 GBP346_A3901 ysxC hemB FALSE 0.108 194.000 0.024 1.000   NA
 7549478 7549479 GBP346_A3902 GBP346_A3903     TRUE 0.720 -7.000 0.007 1.000 N NA
 7549479 7549480 GBP346_A3903 GBP346_A3904   rplQ FALSE 0.507 135.000 0.020 1.000 N NA
 7549480 7549481 GBP346_A3904 GBP346_A3905 rplQ rpoA TRUE 0.751 141.000 0.873 1.000 N NA
 7549481 7549482 GBP346_A3905 GBP346_A3906 rpoA rpsD TRUE 0.794 128.000 0.549 1.000 N NA
 7549482 7549483 GBP346_A3906 GBP346_A3907 rpsD rpsK TRUE 0.913 151.000 0.509 0.013 Y NA
 7549483 7549484 GBP346_A3907 GBP346_A3908 rpsK rpsM TRUE 0.978 24.000 0.810 0.009 Y NA
 7549484 7549485 GBP346_A3908 GBP346_A3909 rpsM rpmJ TRUE 0.829 39.000 0.194 0.009   NA
 7549485 7549486 GBP346_A3909 GBP346_A3910 rpmJ infA_2 TRUE 0.629 21.000 0.104 1.000   NA
 7549486 7549487 GBP346_A3910 GBP346_A3911 infA_2 secY TRUE 0.848 10.000 0.083 1.000 N NA
 7549487 7549488 GBP346_A3911 GBP346_A3912 secY rplO TRUE 0.872 45.000 0.730 1.000 N NA
 7549488 7549489 GBP346_A3912 GBP346_A3913 rplO rpmD TRUE 0.978 29.000 0.653 0.002 Y NA
 7549489 7549490 GBP346_A3913 GBP346_A3914 rpmD rpsE TRUE 0.983 16.000 0.789 0.013 Y NA
 7549490 7549491 GBP346_A3914 GBP346_A3915 rpsE rplR TRUE 0.984 14.000 0.814 0.013 Y NA
 7549491 7549492 GBP346_A3915 GBP346_A3916 rplR rplF TRUE 0.985 13.000 0.815 0.009 Y NA
 7549492 7549493 GBP346_A3916 GBP346_A3917 rplF rpsH TRUE 0.978 21.000 0.808 0.009 Y NA
 7549493 7549494 GBP346_A3917 GBP346_A3918 rpsH   TRUE 0.978 15.000 0.295 0.009 Y NA
 7549494 7549495 GBP346_A3918 GBP346_A3919     TRUE 0.984 8.000 0.309 0.009 Y NA
 7549495 7549496 GBP346_A3919 GBP346_A3920   rplX TRUE 0.980 18.000 0.758 0.009 Y NA
 7549496 7549497 GBP346_A3920 GBP346_A3921 rplX rplN TRUE 0.987 10.000 0.810 0.013 Y NA
 7549497 7549498 GBP346_A3921 GBP346_A3922 rplN rpsQ FALSE 0.505 310.000 0.791 0.013 Y NA
 7549498 7549499 GBP346_A3922 GBP346_A3923 rpsQ rpmC TRUE 0.989 -3.000 0.828 0.009 Y NA
 7549499 7549500 GBP346_A3923 GBP346_A3924 rpmC rplP TRUE 0.988 10.000 0.802 0.009 Y NA
 7549500 7549501 GBP346_A3924 GBP346_A3925 rplP rpsC TRUE 0.990 3.000 0.828 0.013 Y NA
 7549501 7549502 GBP346_A3925 GBP346_A3926 rpsC rplV TRUE 0.985 12.000 0.719 0.013 Y NA
 7549502 7549503 GBP346_A3926 GBP346_A3927 rplV rpsS TRUE 0.985 13.000 0.769 0.013 Y NA
 7549503 7549504 GBP346_A3927 GBP346_A3928 rpsS rplB TRUE 0.986 11.000 0.820 0.013 Y NA
 7549504 7549505 GBP346_A3928 GBP346_A3929 rplB rplW TRUE 0.983 3.000 0.849 1.000 Y NA
 7549505 7549506 GBP346_A3929 GBP346_A3930 rplW rplD TRUE 0.977 -3.000 0.513 1.000 Y NA
 7549506 7549507 GBP346_A3930 GBP346_A3931 rplD rplC TRUE 0.989 0.000 0.486 0.009 Y NA
 7549507 7549508 GBP346_A3931 GBP346_A3932 rplC rpsJ TRUE 0.838 176.000 0.307 0.013 Y NA
 7549508 7549509 GBP346_A3932 GBP346_A3933 rpsJ tuf_1 TRUE 0.823 153.000 0.318 1.000 Y NA
 7549509 7549510 GBP346_A3933 GBP346_A3934 tuf_1 fusA_2 TRUE 0.975 42.000 0.400 0.001 Y NA
 7549510 7549511 GBP346_A3934 GBP346_A3935 fusA_2 rpsG TRUE 0.933 122.000 0.579 1.000 Y NA
 7549511 7549512 GBP346_A3935 GBP346_A3936 rpsG rpsL TRUE 0.895 171.000 0.620 0.002 Y NA
 7549515 7549516 GBP346_A3939 GBP346_A3940     FALSE 0.054 32.000 0.000 NA   NA
 7549517 7549518 GBP346_A3941 GBP346_A3942 rpoC rpoB TRUE 0.925 22.000 0.851 0.000   NA
 7549518 7549519 GBP346_A3942 GBP346_A3943 rpoB rplL FALSE 0.037 364.000 0.223 1.000   NA
 7549519 7549520 GBP346_A3943 GBP346_A3944 rplL   TRUE 0.958 64.000 0.884 1.000 Y NA
 7549520 7549521 GBP346_A3944 GBP346_A3945   rplA FALSE 0.471 241.000 0.302 1.000 Y NA
 7549521 7549522 GBP346_A3945 GBP346_A3946 rplA rplK TRUE 0.990 1.000 0.838 0.013 Y NA
 7549522 7549523 GBP346_A3946 GBP346_A3947 rplK nusG TRUE 0.704 146.000 0.681 1.000 N NA
 7549523 7549524 GBP346_A3947 GBP346_A3948 nusG secE TRUE 0.949 2.000 0.843 1.000 N NA
 7549524 7549525 GBP346_A3948 GBP346_A3949 secE   FALSE 0.051 42.000 0.000 NA   NA
 7549525 7549526 GBP346_A3949 GBP346_A3950   tuf_2 FALSE 0.052 59.000 0.000 NA   NA
 7549526 7549527 GBP346_A3950 GBP346_A3951 tuf_2   FALSE 0.052 63.000 0.000 NA   NA
 7549527 7549528 GBP346_A3951 GBP346_A3952     FALSE 0.055 25.000 0.000 NA   NA
 7549528 7549529 GBP346_A3952 GBP346_A3953     FALSE 0.051 44.000 0.000 NA   NA
 7549531 7549532 GBP346_A3954 GBP346_A3956   rrf_3 FALSE 0.000 510.000 0.000 NA   NA
 7549532 7549533 GBP346_A3956 GBP346_A4282 rrf_3 rrl_3 FALSE 0.008 184.000 0.000 NA   NA
 7549533 7549534 GBP346_A4282 GBP346_A3957 rrl_3   FALSE 0.001 392.000 0.000 NA   NA
 7549534 7549535 GBP346_A3957 GBP346_A3958     FALSE 0.053 34.000 0.000 NA   NA
 7549535 7549536 GBP346_A3958 GBP346_A3959   rrs_3 FALSE 0.047 83.000 0.000 NA   NA
 7549536 7549537 GBP346_A3959 GBP346_A3960 rrs_3   FALSE 0.051 65.000 0.000 NA   NA
 7549537 7549538 GBP346_A3960 GBP346_A3961     FALSE 0.001 367.000 0.000 NA   NA
 7549539 7549540 GBP346_A3962 GBP346_A3963 paaG paaH TRUE 0.867 6.000 0.920 NA   NA
 7549540 7549541 GBP346_A3963 GBP346_A3964 paaH paaI TRUE 0.837 11.000 0.943 NA   NA
 7549541 7549542 GBP346_A3964 GBP346_A3965 paaI paaJ TRUE 0.739 36.000 0.919 NA   NA
 7549542 7549543 GBP346_A3965 GBP346_A3966 paaJ paaK TRUE 0.849 2.000 0.571 NA   NA
 7549543 7549544 GBP346_A3966 GBP346_A3967 paaK   FALSE 0.297 137.000 0.150 NA   NA
 7549544 7549545 GBP346_A3967 GBP346_A3968     TRUE 0.648 27.000 0.383 NA   NA
 7549545 7549546 GBP346_A3968 GBP346_A3969     FALSE 0.032 243.000 0.000 1.000   NA
 7549550 7549551 GBP346_A3973 GBP346_A3974     FALSE 0.107 -3.000 0.000 NA   NA
 7549552 7549553 GBP346_A3975 GBP346_A3976     FALSE 0.102 185.000 0.109 NA   NA
 7549554 7549555 GBP346_A3977 GBP346_A3978 pyrE   FALSE 0.001 323.000 0.000 NA   NA
 7549557 7549558 GBP346_A3980 GBP346_A3981   argC FALSE 0.397 153.000 0.214 1.000   NA
 7549558 7549559 GBP346_A3981 GBP346_A3982 argC   FALSE 0.418 17.000 0.068 NA   NA
 7549559 7549560 GBP346_A3982 GBP346_A3983     FALSE 0.001 402.000 0.000 NA   NA
 7549560 7549561 GBP346_A3983 GBP346_A3984     FALSE 0.460 126.000 0.231 NA   NA
 7549561 7549562 GBP346_A3984 GBP346_A3985     FALSE 0.058 20.000 0.000 NA   NA
 7549565 7549566 GBP346_A3988 GBP346_A3989     TRUE 0.764 99.000 0.165 1.000 N NA
 7549568 7549569 GBP346_A3991 GBP346_A3992     FALSE 0.296 145.000 0.200 NA   NA
 7549569 7549570 GBP346_A3992 GBP346_A3993     TRUE 0.629 -46.000 0.500 NA   NA
 7549571 7549572 GBP346_A3994 GBP346_A3995     FALSE 0.047 83.000 0.000 NA   NA
 7549573 7549574 GBP346_A3996 GBP346_A3997     FALSE 0.001 306.000 0.000 NA   NA
 7549578 7549579 GBP346_A4001 GBP346_A4002     FALSE 0.051 65.000 0.000 NA   NA
 7549579 7549580 GBP346_A4002 GBP346_A4003     FALSE 0.497 -3.000 0.054 NA   NA
 7549580 7549581 GBP346_A4003 GBP346_A4004     TRUE 0.731 19.000 0.613 NA   NA
 7549581 7549582 GBP346_A4004 GBP346_A4005     TRUE 0.731 123.000 0.187 1.000 N NA
 7549585 7549586 GBP346_A4008 GBP346_A4009     TRUE 0.700 -3.000 0.044 1.000   NA
 7549586 7549587 GBP346_A4009 GBP346_A4010     TRUE 0.731 91.000 0.395 1.000   NA
 7549590 7549591 GBP346_A4013 GBP346_A4014     FALSE 0.047 88.000 0.000 NA   NA
 7549591 7549592 GBP346_A4014 GBP346_A4015     FALSE 0.040 118.000 0.000 NA   NA
 7549594 7549595 GBP346_A4017 GBP346_A4018     FALSE 0.006 456.000 0.000 1.000   NA
 7549595 7549596 GBP346_A4018 GBP346_A4019     FALSE 0.486 -3.000 0.051 NA   NA
 7549597 7549598 GBP346_A4020 GBP346_A4021     TRUE 0.813 45.000 0.245 1.000 N NA
 7549599 7549600 GBP346_A4022 GBP346_A4023 metF   FALSE 0.484 18.000 0.109 NA   NA
 7549600 7549601 GBP346_A4023 GBP346_A4024   ahcY FALSE 0.084 164.000 0.042 NA   NA
 7549603 7549604 GBP346_A4026 GBP346_A4027     TRUE 0.810 22.000 0.193 1.000 N NA
 7549604 7549605 GBP346_A4027 GBP346_A4028   flhF TRUE 0.792 -7.000 0.083 1.000 N NA
 7549605 7549606 GBP346_A4028 GBP346_A4029 flhF flhA TRUE 0.949 -3.000 0.028 1.000 Y NA
 7549606 7549607 GBP346_A4029 GBP346_A4030 flhA flhB TRUE 0.979 -3.000 0.088 0.006 Y NA
 7549607 7549608 GBP346_A4030 GBP346_A4031 flhB   FALSE 0.000 693.000 0.000 NA   NA
 7549608 7549609 GBP346_A4031 GBP346_A4032     FALSE 0.151 189.000 0.219 NA   NA
 7549609 7549610 GBP346_A4032 GBP346_A4033     TRUE 0.726 23.000 0.714 NA   NA
 7549610 7549611 GBP346_A4033 GBP346_A4034     FALSE 0.116 198.000 0.185 NA   NA
 7549611 7549612 GBP346_A4034 GBP346_A4035     TRUE 0.960 20.000 0.741 1.000 Y NA
 7549612 7549613 GBP346_A4035 GBP346_A4036     FALSE 0.331 349.000 0.200 0.008 Y NA
 7549613 7549614 GBP346_A4036 GBP346_A4037     TRUE 0.956 6.000 0.056 1.000 Y NA
 7549614 7549615 GBP346_A4037 GBP346_A4038     TRUE 0.975 -3.000 0.444 1.000 Y NA
 7549615 7549616 GBP346_A4038 GBP346_A4039     TRUE 0.960 4.000 0.062 1.000 Y NA
 7549616 7549617 GBP346_A4039 GBP346_A4040     TRUE 0.959 41.000 0.128 0.005 Y NA
 7549617 7549618 GBP346_A4040 GBP346_A4041     TRUE 0.953 31.000 0.064 0.005 Y NA
 7549618 7549619 GBP346_A4041 GBP346_A4042     TRUE 0.955 32.000 0.647 1.000 Y NA
 7549619 7549620 GBP346_A4042 GBP346_A4043     TRUE 0.885 31.000 0.824 1.000 N NA
 7549620 7549621 GBP346_A4043 GBP346_A4044     TRUE 0.954 17.000 0.306 1.000 Y NA
 7549621 7549622 GBP346_A4044 GBP346_A4045     FALSE 0.224 194.000 0.204 1.000   NA
 7549622 7549623 GBP346_A4045 GBP346_A4046     TRUE 0.910 94.000 0.938 0.001   NA
 7549626 7549627 GBP346_A4049 GBP346_A4050     FALSE 0.048 -33.000 0.000 NA   NA
 7549627 7549628 GBP346_A4050 GBP346_A4051   aqpZ FALSE 0.133 109.000 0.010 NA   NA
 7549629 7549630 GBP346_A4052 GBP346_A4053     FALSE 0.498 118.000 0.235 NA   NA
 7549631 7549632 GBP346_A4054 GBP346_A4056     FALSE 0.108 -49.000 0.004 NA   NA
 7549634 7549635 GBP346_A4057 GBP346_A4058     TRUE 0.835 150.000 0.312 1.000 Y NA
 7549635 7549636 GBP346_A4058 GBP346_A4059     TRUE 0.718 14.000 0.333 NA   NA
 7549636 7549637 GBP346_A4059 GBP346_A4060     FALSE 0.004 224.000 0.000 NA   NA
 7549637 7549638 GBP346_A4060 GBP346_A4061     TRUE 0.878 -3.000 0.116 1.000 N NA
 7549638 7549639 GBP346_A4061 GBP346_A4062     TRUE 0.839 -3.000 0.041 1.000 N NA
 7549639 7549640 GBP346_A4062 GBP346_A4063     TRUE 0.724 12.000 0.312 NA   NA
 7549640 7549641 GBP346_A4063 GBP346_A4064     TRUE 0.712 3.000 0.156 NA   NA
 7549641 7549642 GBP346_A4064 GBP346_A4065     TRUE 0.975 3.000 0.800 NA Y NA
 7549642 7549643 GBP346_A4065 GBP346_A4066     TRUE 0.747 0.000 0.054 1.000   NA
 7549643 7549644 GBP346_A4066 GBP346_A4067     TRUE 0.608 2.000 0.081 NA   NA
 7549645 7549646 GBP346_A4068 GBP346_A4069     FALSE 0.005 208.000 0.000 NA   NA
 7549647 7549648 GBP346_A4070 GBP346_A4071     FALSE 0.252 37.000 0.035 NA   NA
 7549649 7549650 GBP346_A4072 GBP346_A4073 acpA_2   TRUE 0.671 -3.000 0.143 NA   NA
 7549650 7549651 GBP346_A4073 GBP346_A4074     FALSE 0.047 94.000 0.000 NA   NA
 7549651 7549652 GBP346_A4074 GBP346_A4075     FALSE 0.228 63.000 0.027 NA   NA
 7549652 7549653 GBP346_A4075 GBP346_A4076     TRUE 0.836 9.000 0.740 NA   NA
 7549653 7549654 GBP346_A4076 GBP346_A4077     TRUE 0.699 60.000 0.625 NA   NA
 7549656 7549657 GBP346_A4079 GBP346_A4080     FALSE 0.104 8.000 0.000 NA   NA
 7549659 7549660 GBP346_A4082 GBP346_A4083     FALSE 0.175 144.000 0.071 NA   NA
 7549660 7549661 GBP346_A4083 GBP346_A4084     FALSE 0.589 9.000 0.100 NA   NA
 7549661 7549662 GBP346_A4084 GBP346_A4085     FALSE 0.218 189.000 0.167 1.000   NA
 7549667 7549668 GBP346_A4090 GBP346_A4091     FALSE 0.291 66.000 0.050 NA   NA
 7549670 7549671 GBP346_A4093 GBP346_A4094     FALSE 0.299 172.000 0.556 NA   NA
 7549673 7549674 GBP346_A4098 GBP346_A4099 gcvT gcvH TRUE 0.970 94.000 0.317 0.001 Y NA
 7549674 7549675 GBP346_A4099 GBP346_A4101 gcvH gcvP FALSE 0.117 501.000 0.249 1.000 Y NA
 7549677 7549678 GBP346_A4102 GBP346_A4103     TRUE 0.808 34.000 0.778 1.000   NA
 7549680 7549681 GBP346_A4105 GBP346_A4106     TRUE 0.757 29.000 0.273 NA N NA
 7549684 7549685 GBP346_A4108 GBP346_A4110   eutC FALSE 0.210 66.000 0.023 NA   NA
 7549685 7549686 GBP346_A4110 GBP346_A4111 eutC eutB TRUE 0.991 -3.000 0.859 0.000 Y NA
 7549686 7549687 GBP346_A4111 GBP346_A4112 eutB eat TRUE 0.945 57.000 0.407 1.000 Y NA
 7549687 7549688 GBP346_A4112 GBP346_A4113 eat   FALSE 0.200 90.000 0.023 NA   NA
 7549689 7549690 GBP346_A4114 GBP346_A4115     FALSE 0.343 40.000 0.067 NA   NA
 7549691 7549692 GBP346_A4116 GBP346_A4117     FALSE 0.001 460.000 0.000 NA   NA
 7549692 7549693 GBP346_A4117 GBP346_A4118     FALSE 0.122 2.000 0.000 NA   NA
 7549693 7549694 GBP346_A4118 GBP346_A4119     TRUE 0.626 13.000 0.167 NA   NA
 7549695 7549696 GBP346_A4120 GBP346_A4121 cadR   TRUE 0.897 100.000 0.250 NA Y NA
 7549697 7549698 GBP346_A4122 GBP346_A4123     FALSE 0.472 -396.000 0.200 NA   NA
 7549698 7549699 GBP346_A4123 GBP346_A4124     TRUE 0.674 -42.000 0.667 NA   NA
 7549699 7549700 GBP346_A4124 GBP346_A4125     FALSE 0.359 110.000 0.095 NA   NA
 7549700 7549701 GBP346_A4125 GBP346_A4126     TRUE 0.948 54.000 0.476 1.000 Y NA
 7549701 7549702 GBP346_A4126 GBP346_A4127     FALSE 0.044 103.000 0.000 NA   NA
 7549702 7549703 GBP346_A4127 GBP346_A4128     FALSE 0.052 63.000 0.000 NA   NA
 7549704 7549705 GBP346_A4129 GBP346_A4130   fcs TRUE 0.926 117.000 0.357 1.000 Y NA
 7549706 7549707 GBP346_A4131 GBP346_A4132     TRUE 0.762 85.000 0.143 1.000 N NA
 7549708 7549709 GBP346_A4133 GBP346_A4134     FALSE 0.600 110.000 0.429 NA   NA
 7549710 7549711 GBP346_A4135 GBP346_A4136 priA   FALSE 0.190 -7.000 0.008 NA   NA
 7549711 7549712 GBP346_A4136 GBP346_A4137   hemE FALSE 0.003 242.000 0.000 NA   NA
 7549714 7549715 GBP346_A4139 GBP346_A4140     FALSE 0.001 324.000 0.000 NA   NA
 7549715 7549716 GBP346_A4140 GBP346_A4141     FALSE 0.358 42.000 0.073 NA   NA
 7549716 7549717 GBP346_A4141 GBP346_A4142   atpC FALSE 0.116 233.000 0.002 1.000 N NA
 7549717 7549718 GBP346_A4142 GBP346_A4143 atpC atpD_1 FALSE 0.351 432.000 0.837 0.002 Y NA
 7549718 7549719 GBP346_A4143 GBP346_A4144 atpD_1 atpG_1 TRUE 0.976 80.000 0.724 0.002 Y NA
 7549719 7549720 GBP346_A4144 GBP346_A4145 atpG_1 atpA_1 TRUE 0.978 72.000 0.846 0.002 Y NA
 7549720 7549721 GBP346_A4145 GBP346_A4146 atpA_1 atpH TRUE 0.979 47.000 0.864 0.002 Y NA
 7549721 7549722 GBP346_A4146 GBP346_A4147 atpH atpF TRUE 0.987 3.000 0.242 0.002 Y NA
 7549722 7549723 GBP346_A4147 GBP346_A4148 atpF   TRUE 0.964 128.000 0.666 0.002 Y NA
 7549723 7549724 GBP346_A4148 GBP346_A4149   atpB_1 TRUE 0.974 77.000 0.557 0.002 Y NA
 7549724 7549725 GBP346_A4149 GBP346_A4150 atpB_1   TRUE 0.708 95.000 0.330 1.000   NA
 7549727 7549728 GBP346_A4151 GBP346_A4153     TRUE 0.814 8.000 0.016 1.000 N NA
 7549728 7549729 GBP346_A4153 GBP346_A4154     TRUE 0.880 36.000 0.827 1.000 N NA
 7549729 7549730 GBP346_A4154 GBP346_A4155   gidB TRUE 0.835 53.000 0.339 1.000 N NA
 7549730 7549731 GBP346_A4155 GBP346_A4156 gidB gidA TRUE 0.851 54.000 0.466 1.000 N NA
 7549731 7549732 GBP346_A4156 GBP346_A4157 gidA   FALSE 0.336 162.000 0.009 1.000 N NA
 7549732 7549733 GBP346_A4157 GBP346_A4158     TRUE 0.989 3.000 0.600 0.015 Y NA
 7549733 7549734 GBP346_A4158 GBP346_A4159     TRUE 0.987 5.000 0.525 0.036 Y NA
 7549734 7549735 GBP346_A4159 GBP346_A4160     FALSE 0.216 313.000 0.320 NA Y NA
 7549735 7549736 GBP346_A4160 GBP346_A4161     FALSE 0.002 268.000 0.000 NA   NA
 7549736 7549737 GBP346_A4161 GBP346_A4162     FALSE 0.053 -21.000 0.000 NA   NA
 7549737 7549738 GBP346_A4162 GBP346_A4163     FALSE 0.049 71.000 0.000 NA   NA
 7549738 7549739 GBP346_A4163 GBP346_A4164     FALSE 0.054 32.000 0.000 NA   NA
 7549739 7549740 GBP346_A4164 GBP346_A4165     TRUE 0.694 -12.000 0.000 0.036   NA
 7549740 7549741 GBP346_A4165 GBP346_A4166     TRUE 0.896 0.000 0.091 0.036   NA
 7549741 7549742 GBP346_A4166 GBP346_A4167     FALSE 0.371 21.000 0.068 NA   NA
 7549742 7549743 GBP346_A4167 GBP346_A4168     TRUE 0.717 -3.000 0.200 NA   NA
 7549743 7549744 GBP346_A4168 GBP346_A4169     TRUE 0.912 68.000 0.294 NA Y NA
 7549744 7549745 GBP346_A4169 GBP346_A4170     TRUE 0.988 -3.000 0.716 0.015 Y NA
 7549750 7549751 GBP346_A4175 GBP346_A4176     FALSE 0.492 42.000 0.154 NA   NA
 7549751 7549752 GBP346_A4176 GBP346_A4177     FALSE 0.039 393.000 0.089 1.000 N NA
 7549754 7549755 GBP346_A4179 GBP346_A4180 phhA   TRUE 0.866 -3.000 0.087 1.000 N NA
 7549757 7549758 GBP346_A4182 GBP346_A4183     TRUE 0.938 125.000 0.833 1.000 Y NA
 7549759 7549760 GBP346_A4184 GBP346_A4185     FALSE 0.046 259.000 0.040 1.000   NA
 7549760 7549761 GBP346_A4185 GBP346_A4186     FALSE 0.157 238.000 0.087 1.000 N NA
 7549761 7549762 GBP346_A4186 GBP346_A4187     TRUE 0.788 40.000 0.163 1.000 N NA
 7549764 7549765 GBP346_A4189 GBP346_A4190     TRUE 0.813 45.000 0.907 1.000   NA
 7549765 7549766 GBP346_A4190 GBP346_A4191     FALSE 0.010 739.000 0.000 1.000 N NA
 7549767 7549768 GBP346_A4192 GBP346_A4193     FALSE 0.004 235.000 0.000 NA   NA
 7549769 7549770 GBP346_A4194 GBP346_A4195     FALSE 0.038 319.000 0.360 NA   NA
 7549771 7549772 GBP346_A4196 GBP346_A4197   gspD FALSE 0.161 74.000 0.013 NA   NA
 7549772 7549773 GBP346_A4197 GBP346_A4198 gspD gspE TRUE 0.990 -3.000 0.776 0.002 Y NA
 7549773 7549774 GBP346_A4198 GBP346_A4199 gspE gspF TRUE 0.990 5.000 0.653 0.002 Y NA
 7549776 7549777 GBP346_A4201 GBP346_A4202   gspG FALSE 0.215 18.000 0.014 NA   NA
 7549777 7549778 GBP346_A4202 GBP346_A4203 gspG gspH TRUE 0.955 35.000 0.063 0.002 Y NA
 7549778 7549779 GBP346_A4203 GBP346_A4204 gspH gspI TRUE 0.982 -3.000 0.116 0.002 Y NA
 7549779 7549780 GBP346_A4204 GBP346_A4205 gspI   TRUE 0.876 -22.000 0.078 NA Y NA
 7549780 7549781 GBP346_A4205 GBP346_A4206   gspK TRUE 0.956 2.000 0.153 NA Y NA
 7549781 7549782 GBP346_A4206 GBP346_A4207 gspK gspL TRUE 0.797 46.000 0.150 0.038   NA
 7549782 7549783 GBP346_A4207 GBP346_A4208 gspL   TRUE 0.903 -3.000 0.811 1.000   NA
 7549783 7549784 GBP346_A4208 GBP346_A4209     TRUE 0.790 39.000 0.649 1.000   NA
 7549785 7549786 GBP346_A4210 GBP346_A4211     FALSE 0.004 222.000 0.000 NA   NA
 7549787 7549788 GBP346_A4212 GBP346_A4213     FALSE 0.598 148.000 0.857 1.000   NA
 7549790 7549791 GBP346_A4215 GBP346_A4216     TRUE 0.805 69.000 0.840 1.000   NA
 7549792 7549793 GBP346_A4217 GBP346_A4218     FALSE 0.002 269.000 0.000 NA   NA
 7549794 7549795 GBP346_A4219 GBP346_A4220 fliL fliM TRUE 0.963 23.000 0.094 0.001 Y NA
 7549795 7549796 GBP346_A4220 GBP346_A4221 fliM fliN TRUE 0.984 -7.000 0.741 0.001 Y NA
 7549796 7549797 GBP346_A4221 GBP346_A4222 fliN   TRUE 0.975 -3.000 0.443 1.000 Y NA
 7549797 7549798 GBP346_A4222 GBP346_A4223   fliP TRUE 0.972 2.000 0.203 1.000 Y NA
 7549798 7549799 GBP346_A4223 GBP346_A4224 fliP fliQ TRUE 0.978 26.000 0.827 0.006 Y NA
 7549799 7549800 GBP346_A4224 GBP346_A4225 fliQ fliR TRUE 0.956 119.000 0.208 0.002 Y NA
 7549802 7549803 GBP346_A4227 GBP346_A4228     TRUE 0.692 -33.000 0.667 NA   NA
 7549803 7549804 GBP346_A4228 GBP346_A4229     FALSE 0.279 158.000 0.273 NA   NA
 7549804 7549805 GBP346_A4229 GBP346_A4230     TRUE 0.933 84.000 0.303 1.000 Y NA
 7549805 7549806 GBP346_A4230 GBP346_A4231     TRUE 0.960 28.000 0.914 1.000 Y NA
 7549806 7549807 GBP346_A4231 GBP346_A4232     TRUE 0.878 78.000 0.257 0.063 N NA
 7549807 7549808 GBP346_A4232 GBP346_A4233     TRUE 0.977 11.000 0.917 1.000 Y NA
 7549808 7549809 GBP346_A4233 GBP346_A4235     FALSE 0.205 230.000 0.150 1.000 N NA
 7549811 7549812 GBP346_A4236 GBP346_A4237     TRUE 0.858 41.000 0.418 0.034   NA
 7549812 7549813 GBP346_A4237 GBP346_A4238     FALSE 0.003 241.000 0.000 NA   NA
 7549813 7549814 GBP346_A4238 GBP346_A4239     FALSE 0.426 145.000 0.500 NA   NA
 7549814 7549815 GBP346_A4239 GBP346_A4240     FALSE 0.022 400.000 0.000 1.000 N NA
 7549816 7549817 GBP346_A4241 GBP346_A4242     FALSE 0.578 -15.000 0.222 NA   NA
 7549817 7549818 GBP346_A4242 GBP346_A4243     FALSE 0.596 -10.000 0.214 NA   NA
 7549818 7549819 GBP346_A4243 GBP346_A4244     TRUE 0.976 -3.000 0.500 1.000 Y NA
 7549819 7549820 GBP346_A4244 GBP346_A4245     TRUE 0.986 -3.000 0.545 0.036 Y NA
 7549820 7549821 GBP346_A4245 GBP346_A4246     TRUE 0.966 5.000 0.364 NA Y NA
 7549821 7549822 GBP346_A4246 GBP346_A4247     FALSE 0.066 217.000 0.000 NA N NA
 7549822 7549823 GBP346_A4247 GBP346_A4248     TRUE 0.642 56.000 0.400 NA   NA
 7549823 7549824 GBP346_A4248 GBP346_A4249     TRUE 0.794 11.000 0.533 NA   NA
 7549824 7549825 GBP346_A4249 GBP346_A4250     TRUE 0.703 46.000 0.667 NA   NA
 7549825 7549826 GBP346_A4250 GBP346_A4251     TRUE 0.835 85.000 0.444 1.000 N NA
 7549827 7549828 GBP346_A4252 GBP346_A4253     TRUE 0.754 -3.000 0.261 NA   NA
 7549829 7549830 GBP346_A4254 GBP346_A4255     TRUE 0.746 59.000 1.000 NA   NA
 7549830 7549831 GBP346_A4255 GBP346_A4256     FALSE 0.412 24.000 0.091 NA   NA
 7549831 7549832 GBP346_A4256 GBP346_A4257     TRUE 0.773 30.000 0.333 NA N NA
 7549832 7549833 GBP346_A4257 GBP346_A4258     FALSE 0.047 460.000 0.000 NA Y NA
 7549836 7549837 GBP346_A4261 GBP346_A4262     TRUE 0.969 13.000 0.562 1.000 Y NA
 7549837 7549838 GBP346_A4262 GBP346_A4263     FALSE 0.026 372.000 0.000 1.000 N NA
 7549842 7549843 GBP346_A4267 GBP346_A4268     TRUE 0.749 -13.000 0.800 NA   NA
 7549843 7549844 GBP346_A4268 GBP346_A4269     FALSE 0.052 62.000 0.000 NA   NA
 7549845 7549846 GBP346_A4270 GBP346_A4271     FALSE 0.401 27.000 0.087 NA   NA
 7549846 7549847 GBP346_A4271 GBP346_A4272     TRUE 0.967 -3.000 0.525 NA Y NA
 7549848 7549849 GBP346_A4273 GBP346_A4274     FALSE 0.285 19.000 0.035 NA   NA
 7549849 7549850 GBP346_A4274 GBP346_A4275     TRUE 0.965 -3.000 0.719 0.035 N NA
 7549851 7549852 GBP346_A4276 GBP346_A4277 gyrB dnaN TRUE 0.618 189.000 0.114 1.000 Y NA
 7549852 7549853 GBP346_A4277 GBP346_A4278 dnaN dnaA TRUE 0.805 161.000 0.328 1.000 Y NA