MicrobesOnline Operon Predictions for Clavibacter michiganensis subsp. michiganensis NCPPB 382

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column	Description
Gene1	VIMSS id of 1st gene in pair
SysName1	Systematic name of 1st gene in pair
Name1	Ordinary name of 1st gene in pair
Gene2	VIMSS id of 2nd gene in pair
SysName2	Systematic name of 2nd gene in pair
Name2	Ordinary name of 2nd gene in pair
bOp	Whether the pair is predicted to lie in the same operon or not
pOp	Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep	Distance between the two genes, in base pairs
MOGScore	Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore	Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim	Whether the genes share a COG category or not
ExprSim	Correlation of expression patterns (not available for most genomes)

Gene1	Gene2	SysName1	SysName2	Name1	Name2	bOp	pOp	Sep	MOGScore	GOScore	COGSim	ExprSim
3748893	3748894	CMM_0001	CMM_0002	dnaA	dnaN	FALSE	0.272	544.000	0.328	1.000	Y	NA
3748894	3748895	CMM_0002	CMM_0003	dnaN	gndA1	FALSE	0.523	21.000	0.006	1.000	N	NA
3748895	3748896	CMM_0003	CMM_0004	gndA1	recF	TRUE	0.708	8.000	0.009	1.000	N	NA
3748896	3748897	CMM_0004	CMM_0005	recF		TRUE	0.919	-3.000	0.099	NA		NA
3748897	3748898	CMM_0005	CMM_0006		gyrB	FALSE	0.060	190.000	0.022	NA		NA
3748898	3748899	CMM_0006	CMM_0007	gyrB	gyrA	TRUE	0.922	83.000	0.306	0.002	Y	NA
3748899	3748900	CMM_0007	CMM_0008	gyrA		TRUE	0.841	-7.000	0.053	NA		NA
3748900	3748901	CMM_0008	CMM_tRNA_0001			FALSE	0.134	49.000	0.000	NA		NA
3748901	3748902	CMM_tRNA_0001	CMM_tRNA_0002			FALSE	0.105	81.000	0.000	NA		NA
3748904	3748905	CMM_0010	CMM_0011	ppiA		TRUE	0.958	0.000	0.182	1.000		NA
3748907	3748908	CMM_0013	CMM_0014		pabA	FALSE	0.212	158.000	0.046	NA	N	NA
3748909	3748910	CMM_0015	CMM_0016	pknB	pknA	TRUE	0.892	135.000	0.368	0.001	Y	NA
3748910	3748911	CMM_0016	CMM_0017	pknA	pbpA	TRUE	0.976	-3.000	0.162	0.004	N	NA
3748911	3748912	CMM_0017	CMM_0018	pbpA	ftsW1	TRUE	0.930	-3.000	0.070	1.000	N	NA
3748912	3748913	CMM_0018	CMM_0019	ftsW1		TRUE	0.953	-7.000	0.180	1.000	N	NA
3748913	3748914	CMM_0019	CMM_0020			TRUE	0.977	5.000	0.267	NA	Y	NA
3748914	3748915	CMM_0020	CMM_0021			TRUE	0.983	-3.000	0.629	NA		NA
3748916	3748917	CMM_tRNA_0003	CMM_0022			FALSE	0.032	171.000	0.000	NA		NA
3748917	3748918	CMM_0022	CMM_0023			TRUE	0.589	-3.000	0.000	NA		NA
3748918	3748919	CMM_0023	CMM_0024			TRUE	0.923	8.000	0.000	0.022	Y	NA
3748921	3748922	CMM_0026	CMM_0027		recQ1	FALSE	0.030	177.000	0.000	NA		NA
3748922	3748923	CMM_0027	CMM_0028	recQ1		TRUE	0.589	-3.000	0.000	NA		NA
3748923	3748924	CMM_0028	CMM_0029		glsA	FALSE	0.014	257.000	0.000	NA		NA
3748926	3748927	CMM_0031	CMM_0032			FALSE	0.109	78.000	0.000	NA		NA
3748929	3748930	CMM_0034	CMM_0035			TRUE	0.963	-3.000	0.286	NA		NA
3748930	3748931	CMM_0035	CMM_0036			FALSE	0.059	158.000	0.000	1.000		NA
3748931	3748932	CMM_0036	CMM_PS_01			FALSE	0.014	252.000	0.000	NA		NA
3748932	3748933	CMM_PS_01	CMM_PS_02			FALSE	0.010	304.000	0.000	NA		NA
3748934	3748935	CMM_0037	CMM_PS_03			FALSE	0.009	344.000	0.000	NA		NA
3748937	3748938	CMM_0038	CMM_0039		chpE	FALSE	0.007	442.000	0.000	NA		NA
3748938	3748939	CMM_0039	CMM_0040	chpE		FALSE	0.020	208.000	0.000	NA		NA
3748943	3748944	CMM_0044	CMM_0045	ppaC		FALSE	0.004	2147.000	0.000	NA		NA
3748945	3748946	CMM_PS_05	CMM_0046	chpA		FALSE	0.004	2179.000	0.000	NA		NA
3748947	3748948	CMM_0047	CMM_0048			FALSE	0.005	810.000	0.000	NA		NA
3748948	3748949	CMM_0048	CMM_PS_06			FALSE	0.015	247.000	0.000	NA		NA
3748954	3748955	CMM_PS_07	CMM_0053		chpF	FALSE	0.004	1863.000	0.000	NA		NA
3748956	3748957	CMM_0054	CMM_0055			TRUE	0.982	-7.000	0.692	NA		NA
3748957	3748958	CMM_0055	CMM_0056			FALSE	0.006	552.000	0.000	NA		NA
3748958	3748959	CMM_0056	CMM_0057			FALSE	0.004	897.000	0.000	NA		NA
3748960	3748961	CMM_0058	CMM_0059		chpG	FALSE	0.018	223.000	0.000	NA		NA
3748961	3748962	CMM_0059	CMM_0060	chpG		FALSE	0.004	1354.000	0.000	NA		NA
3748962	3748963	CMM_0060	CMM_0061			FALSE	0.009	354.000	0.000	NA		NA
3748963	3748964	CMM_0061	CMM_PS_09		parB2	FALSE	0.007	442.000	0.000	NA		NA
3748966	3748967	CMM_0062	CMM_0063			FALSE	0.008	376.000	0.000	NA		NA
3748968	3748969	CMM_0064	CMM_0065			FALSE	0.135	88.000	0.000	1.000		NA
3748970	3748971	CMM_0066	CMM_0067	parX		FALSE	0.005	787.000	0.000	NA		NA
3748971	3748972	CMM_0067	CMM_0068			FALSE	0.078	118.000	0.000	NA		NA
3748973	3748974	CMM_0069	CMM_0070	nhaA1	sbtA	FALSE	0.007	663.000	0.000	1.000		NA
3748974	3748975	CMM_0070	CMM_PS_25	sbtA		FALSE	0.010	318.000	0.000	NA		NA
3748975	3748976	CMM_PS_25	CMM_0071		ppaE	FALSE	0.016	241.000	0.000	NA		NA
3748976	3748977	CMM_0071	CMM_PS_11	ppaE		FALSE	0.085	111.000	0.000	NA		NA
3748977	3748978	CMM_PS_11	CMM_0072			FALSE	0.012	285.000	0.000	NA		NA
3748979	3748980	CMM_0073	CMM_0074			FALSE	0.004	3308.000	0.000	NA		NA
3748984	3748985	CMM_0078	CMM_0079			FALSE	0.260	17.000	0.000	NA		NA
3748985	3748986	CMM_0079	CMM_0080			TRUE	0.589	-3.000	0.000	NA		NA
3748987	3748988	CMM_0081	CMM_0082		bglB	FALSE	0.409	11.000	0.000	1.000		NA
3748988	3748989	CMM_0082	CMM_0083	bglB	bglC	FALSE	0.517	145.000	0.000	0.012	Y	NA
3748989	3748990	CMM_0083	CMM_0084	bglC		TRUE	0.814	70.000	0.143	1.000	Y	NA
3748990	3748991	CMM_0084	CMM_0085			TRUE	0.997	-3.000	0.786	0.080	Y	NA
3748991	3748992	CMM_0085	CMM_0086			TRUE	0.962	75.000	0.750	0.080	Y	NA
3748996	3748997	CMM_0090	CMM_0091	tomA	regB	FALSE	0.026	339.000	0.000	1.000	N	NA
3748997	3748998	CMM_0091	CMM_0092	regB	regA	TRUE	0.993	-3.000	0.333	0.021	Y	NA
3748998	3748999	CMM_0092	CMM_0093	regA		TRUE	0.844	-3.000	0.000	0.069		NA
3749000	3749001	CMM_0094	CMM_0095	cytA	cytB	TRUE	0.879	-3.000	0.000	0.008		NA
3749001	3749002	CMM_0095	CMM_0096	cytB	cytC	TRUE	0.860	-3.000	0.000	0.040		NA
3749003	3749004	CMM_0097	CMM_0098	bglD		FALSE	0.198	115.000	0.000	1.000	N	NA
3749005	3749006	CMM_0099	CMM_0100	bglE	bglF	TRUE	0.649	15.000	0.000	0.012		NA
3749006	3749007	CMM_0100	CMM_0101	bglF	bglG	FALSE	0.551	165.000	0.045	0.012	Y	NA
3749007	3749008	CMM_0101	CMM_0102	bglG	bglH	TRUE	0.615	20.000	0.000	0.015		NA
3749010	3749011	CMM_0104	CMM_0105		ramA	TRUE	0.674	-3.000	0.000	1.000		NA
3749012	3749013	CMM_0106	CMM_0107	aglA		FALSE	0.453	124.000	0.000	1.000	Y	NA
3749013	3749014	CMM_0107	CMM_0108			TRUE	0.997	0.000	0.667	0.080	Y	NA
3749014	3749015	CMM_0108	CMM_0109			TRUE	0.956	74.000	0.667	0.080	Y	NA
3749016	3749017	CMM_0110	CMM_0111			FALSE	0.514	83.000	0.000	NA	Y	NA
3749017	3749018	CMM_0111	CMM_0112			TRUE	0.963	-3.000	0.286	NA		NA
3749018	3749019	CMM_0112	CMM_0113			FALSE	0.092	94.000	0.000	NA		NA
3749019	3749020	CMM_0113	CMM_0114			TRUE	0.589	-3.000	0.000	NA		NA
3749020	3749021	CMM_0114	CMM_0115			FALSE	0.141	83.000	0.000	1.000		NA
3749021	3749022	CMM_0115	CMM_0116			FALSE	0.182	125.000	0.000	1.000	N	NA
3749025	3749026	CMM_0119	CMM_0120		uahA	FALSE	0.456	24.000	0.000	1.000	N	NA
3749026	3749027	CMM_0120	CMM_0121	uahA		TRUE	0.989	-3.000	0.835	NA		NA
3749027	3749028	CMM_0121	CMM_0122			TRUE	0.991	-3.000	0.931	NA		NA
3749028	3749029	CMM_0122	CMM_0123			TRUE	0.921	-3.000	0.108	NA		NA
3749029	3749030	CMM_0123	CMM_0124			FALSE	0.040	250.000	0.000	1.000	N	NA
3749030	3749031	CMM_0124	CMM_0125			TRUE	0.716	5.000	0.000	1.000	N	NA
3749031	3749032	CMM_0125	CMM_0126			FALSE	0.026	184.000	0.000	NA		NA
3749032	3749033	CMM_0126	CMM_0127		sigX	TRUE	0.589	-3.000	0.000	NA		NA
3749034	3749035	CMM_0128	CMM_0129			FALSE	0.440	6.000	0.000	NA		NA
3749036	3749037	CMM_0130	CMM_0131			FALSE	0.280	14.000	0.000	NA		NA
3749037	3749038	CMM_0131	CMM_0132			FALSE	0.078	118.000	0.000	NA		NA
3749039	3749040	CMM_0133	CMM_0134			FALSE	0.043	246.000	0.000	1.000	N	NA
3749041	3749042	CMM_0135	CMM_0136			TRUE	0.928	-3.000	0.129	NA		NA
3749042	3749043	CMM_0136	CMM_0137			FALSE	0.010	326.000	0.000	NA		NA
3749045	3749046	CMM_0139	CMM_0140			FALSE	0.511	15.000	0.000	1.000	N	NA
3749047	3749048	CMM_0141	CMM_0142			FALSE	0.104	82.000	0.000	NA		NA
3749048	3749049	CMM_0142	CMM_0143			TRUE	0.589	-3.000	0.000	NA		NA
3749050	3749051	CMM_0144	CMM_0145			FALSE	0.008	369.000	0.000	NA		NA
3749051	3749052	CMM_0145	CMM_0146			FALSE	0.071	126.000	0.000	NA		NA
3749052	3749053	CMM_0146	CMM_0147			TRUE	0.984	0.000	0.600	NA		NA
3749053	3749054	CMM_0147	CMM_0148			TRUE	0.674	-3.000	0.000	1.000		NA
3749054	3749055	CMM_0148	CMM_0149			FALSE	0.079	116.000	0.000	NA		NA
3749055	3749056	CMM_0149	CMM_0150			FALSE	0.051	147.000	0.000	NA		NA
3749057	3749058	CMM_0151	CMM_0152	dnaK	grpE	TRUE	0.984	-3.000	0.074	0.007	Y	NA
3749058	3749059	CMM_0152	CMM_0153	grpE	dnaJ1	TRUE	0.872	121.000	0.248	0.007	Y	NA
3749059	3749060	CMM_0153	CMM_0154	dnaJ1	hspR	TRUE	0.974	2.000	0.286	1.000	N	NA
3749060	3749061	CMM_0154	CMM_0155	hspR		TRUE	0.803	-3.000	0.000	1.000	N	NA
3749061	3749062	CMM_0155	CMM_0156			FALSE	0.128	53.000	0.000	NA		NA
3749063	3749064	CMM_0157	CMM_0158			TRUE	0.629	0.000	0.000	NA		NA
3749064	3749065	CMM_0158	CMM_0159			FALSE	0.105	81.000	0.000	NA		NA
3749065	3749066	CMM_0159	CMM_0160			FALSE	0.011	390.000	0.000	1.000		NA
3749066	3749067	CMM_0160	CMM_0161			FALSE	0.250	165.000	0.045	0.057		NA
3749067	3749068	CMM_0161	CMM_0162			FALSE	0.008	587.000	0.000	1.000		NA
3749069	3749070	CMM_0163	CMM_0164			FALSE	0.021	204.000	0.000	NA		NA
3749070	3749071	CMM_0164	CMM_0165		fhuC	FALSE	0.178	51.000	0.000	1.000		NA
3749071	3749072	CMM_0165	CMM_0166	fhuC	fhuD	TRUE	0.993	-3.000	0.577	1.000	Y	NA
3749072	3749073	CMM_0166	CMM_0167	fhuD	fhuB	TRUE	0.947	35.000	0.448	1.000	Y	NA
3749073	3749074	CMM_0167	CMM_0167a	fhuB		FALSE	0.105	121.000	0.000	1.000		NA
3749074	3749075	CMM_0167a	CMM_0168			FALSE	0.017	977.000	0.000	0.068		NA
3749075	3749076	CMM_0168	CMM_0169			TRUE	0.831	27.000	0.000	0.021	Y	NA
3749076	3749077	CMM_0169	CMM_0170			FALSE	0.158	67.000	0.000	1.000		NA
3749078	3749079	CMM_0171	CMM_0172			FALSE	0.157	72.000	0.000	1.000		NA
3749082	3749083	CMM_0175	CMM_0176	mntB		FALSE	0.130	51.000	0.000	NA		NA
3749083	3749084	CMM_0176	CMM_0177		mntC	TRUE	0.589	-3.000	0.000	NA		NA
3749084	3749085	CMM_0177	CMM_0178	mntC		TRUE	0.845	36.000	0.412	NA		NA
3749085	3749086	CMM_0178	CMM_0179			FALSE	0.056	140.000	0.000	NA		NA
3749086	3749087	CMM_0179	CMM_0180			FALSE	0.100	84.000	0.000	NA		NA
3749088	3749089	CMM_0181	CMM_0182			FALSE	0.096	89.000	0.000	NA		NA
3749090	3749091	CMM_0183	CMM_0184		metE1	TRUE	0.937	-3.000	0.000	1.000	Y	NA
3749091	3749092	CMM_0184	CMM_0185	metE1	metC	TRUE	0.930	3.000	0.000	1.000	Y	NA
3749092	3749093	CMM_0185	CMM_0186	metC		TRUE	0.976	3.000	0.400	NA	N	NA
3749095	3749096	CMM_0188	CMM_0189			FALSE	0.127	94.000	0.000	1.000		NA
3749096	3749097	CMM_0189	CMM_0190			TRUE	0.985	-7.000	0.750	1.000		NA
3749097	3749098	CMM_0190	CMM_0191			FALSE	0.532	6.000	0.000	1.000		NA
3749099	3749100	CMM_0192	CMM_0193			FALSE	0.324	11.000	0.000	NA		NA
3749101	3749102	CMM_0194	CMM_0195			TRUE	0.988	-3.000	0.750	1.000		NA
3749102	3749103	CMM_0195	CMM_0196			TRUE	0.718	55.000	0.250	1.000		NA
3749103	3749104	CMM_0196	CMM_0197			TRUE	0.888	52.000	0.171	0.079	Y	NA
3749104	3749105	CMM_0197	CMM_0198			TRUE	0.958	-3.000	0.000	0.079	Y	NA
3749106	3749107	CMM_0199	CMM_0200			TRUE	0.977	3.000	0.556	NA		NA
3749107	3749108	CMM_0200	CMM_0201			FALSE	0.144	45.000	0.000	NA		NA
3749108	3749109	CMM_0201	CMM_0202			FALSE	0.126	99.000	0.000	1.000		NA
3749109	3749110	CMM_0202	CMM_0203			FALSE	0.168	57.000	0.000	1.000		NA
3749112	3749113	CMM_0205	CMM_0206			FALSE	0.111	115.000	0.000	1.000		NA
3749113	3749114	CMM_0206	CMM_0207			FALSE	0.210	145.000	0.000	0.017		NA
3749115	3749116	CMM_0208	CMM_0209			FALSE	0.204	29.000	0.000	NA		NA
3749116	3749117	CMM_0209	CMM_0210			FALSE	0.162	40.000	0.000	NA		NA
3749118	3749119	CMM_0211	CMM_0212			FALSE	0.106	80.000	0.000	NA		NA
3749121	3749122	CMM_0214	CMM_0215			TRUE	0.589	-3.000	0.000	NA		NA
3749124	3749125	CMM_0217	CMM_0218			TRUE	0.991	-3.000	1.000	NA		NA
3749126	3749127	CMM_0219	CMM_0220			FALSE	0.155	42.000	0.000	NA		NA
3749128	3749129	CMM_0221	CMM_0222			TRUE	0.994	0.000	0.333	0.067	Y	NA
3749129	3749130	CMM_0222	CMM_0223			FALSE	0.089	133.000	0.000	1.000		NA
3749131	3749132	CMM_0224	CMM_0225			FALSE	0.034	279.000	0.000	1.000	N	NA
3749133	3749134	CMM_0226	CMM_0227			FALSE	0.063	134.000	0.000	NA		NA
3749134	3749135	CMM_0227	CMM_0228			FALSE	0.249	82.000	0.000	1.000	N	NA
3749135	3749136	CMM_0228	CMM_0229			TRUE	0.757	87.000	0.429	1.000		NA
3749136	3749137	CMM_0229	CMM_0230			TRUE	0.966	-3.000	0.286	1.000		NA
3749137	3749138	CMM_0230	CMM_0231			TRUE	0.984	-3.000	0.636	1.000		NA
3749138	3749139	CMM_0231	CMM_0232			TRUE	0.997	-3.000	0.818	0.078	Y	NA
3749139	3749140	CMM_0232	CMM_0233			TRUE	0.995	-3.000	0.556	0.078	Y	NA
3749140	3749141	CMM_0233	CMM_0234			FALSE	0.090	101.000	0.000	NA		NA
3749141	3749142	CMM_0234	CMM_0235			FALSE	0.095	90.000	0.000	NA		NA
3749142	3749143	CMM_0235	CMM_0236			FALSE	0.091	98.000	0.000	NA		NA
3749143	3749144	CMM_0236	CMM_0237			FALSE	0.019	213.000	0.000	NA		NA
3749144	3749145	CMM_0237	CMM_0238			FALSE	0.102	83.000	0.000	NA		NA
3749146	3749147	CMM_0239	CMM_0240			FALSE	0.026	183.000	0.000	NA		NA
3749148	3749149	CMM_0241	CMM_0242		ogtA	FALSE	0.115	71.000	0.000	NA		NA
3749149	3749150	CMM_0242	CMM_0243	ogtA	sigY	TRUE	0.989	-3.000	0.680	1.000	N	NA
3749151	3749152	CMM_0244	CMM_0245			FALSE	0.018	279.000	0.000	1.000		NA
3749152	3749153	CMM_0245	CMM_0246			FALSE	0.007	444.000	0.000	NA		NA
3749153	3749154	CMM_0246	CMM_0247			FALSE	0.018	222.000	0.000	NA		NA
3749154	3749155	CMM_0247	CMM_0248			FALSE	0.130	51.000	0.000	NA		NA
3749155	3749156	CMM_0248	CMM_0249			FALSE	0.029	179.000	0.000	NA		NA
3749156	3749157	CMM_0249	CMM_0250			TRUE	0.589	-3.000	0.000	NA		NA
3749158	3749159	CMM_0251	CMM_0252			FALSE	0.116	63.000	0.000	NA		NA
3749159	3749160	CMM_0252	CMM_0253			FALSE	0.130	51.000	0.000	NA		NA
3749160	3749161	CMM_0253	CMM_0254			FALSE	0.047	153.000	0.000	NA		NA
3749163	3749164	CMM_0256	CMM_0257			FALSE	0.324	11.000	0.000	NA		NA
3749164	3749165	CMM_0257	CMM_0258			FALSE	0.023	196.000	0.000	NA		NA
3749166	3749167	CMM_0259	CMM_0260	crcB1	crcB2	TRUE	0.994	-3.000	0.452	0.097	Y	NA
3749167	3749168	CMM_0260	CMM_0261	crcB2		TRUE	0.674	-3.000	0.000	1.000		NA
3749168	3749169	CMM_0261	CMM_0262			FALSE	0.444	10.000	0.000	1.000		NA
3749170	3749171	CMM_0263	CMM_0264	ddlA		FALSE	0.138	47.000	0.000	NA		NA
3749171	3749172	CMM_0264	CMM_0265			FALSE	0.561	3.000	0.000	NA		NA
3749173	3749174	CMM_0266	CMM_0267			TRUE	0.589	-3.000	0.000	NA		NA
3749174	3749175	CMM_0267	CMM_0268			TRUE	0.707	61.000	0.188	1.000	N	NA
3749175	3749176	CMM_0268	CMM_0269			TRUE	0.990	-3.000	0.750	1.000	N	NA
3749176	3749177	CMM_0269	CMM_0270			FALSE	0.053	214.000	0.000	1.000	N	NA
3749177	3749178	CMM_0270	CMM_0271			TRUE	0.998	0.000	0.833	0.078	Y	NA
3749178	3749179	CMM_0271	CMM_0272			TRUE	0.996	-7.000	0.833	0.078	Y	NA
3749179	3749180	CMM_0272	CMM_0273			TRUE	0.905	83.000	0.500	NA	Y	NA
3749180	3749181	CMM_0273	CMM_0274			TRUE	0.957	-3.000	0.240	NA		NA
3749181	3749182	CMM_0274	CMM_0275			FALSE	0.316	21.000	0.000	1.000		NA
3749182	3749183	CMM_0275	CMM_0276			TRUE	0.674	-3.000	0.000	1.000		NA
3749186	3749187	CMM_0279	CMM_0280			FALSE	0.120	59.000	0.000	NA		NA
3749187	3749188	CMM_0280	CMM_0281			FALSE	0.013	258.000	0.000	NA		NA
3749188	3749189	CMM_0281	CMM_0282			FALSE	0.532	6.000	0.000	1.000		NA
3749191	3749192	CMM_0284	CMM_0285			FALSE	0.253	18.000	0.000	NA		NA
3749193	3749194	CMM_0286	CMM_0287			TRUE	0.803	-3.000	0.000	1.000	N	NA
3749194	3749195	CMM_0287	CMM_0288			FALSE	0.157	72.000	0.000	1.000		NA
3749197	3749198	CMM_0290	CMM_0291	sigL		TRUE	0.986	-3.000	0.697	NA		NA
3749201	3749202	CMM_0294	CMM_0295			FALSE	0.270	29.000	0.000	1.000		NA
3749203	3749204	CMM_0296	CMM_0297			TRUE	0.884	11.000	0.000	0.078	Y	NA
3749204	3749205	CMM_0297	CMM_0298			TRUE	0.997	-3.000	0.833	0.078	Y	NA
3749205	3749206	CMM_0298	CMM_0299		bglX	TRUE	0.978	-3.000	0.119	1.000	Y	NA
3749210	3749211	CMM_0303	CMM_0304			FALSE	0.115	68.000	0.000	NA		NA
3749211	3749212	CMM_0304	CMM_0305			FALSE	0.165	39.000	0.000	NA		NA
3749212	3749213	CMM_0305	CMM_0306			FALSE	0.024	359.000	0.000	1.000	N	NA
3749218	3749219	CMM_0311	CMM_0312			FALSE	0.010	337.000	0.000	NA		NA
3749219	3749220	CMM_0312	CMM_0313			FALSE	0.138	47.000	0.000	NA		NA
3749221	3749222	CMM_0314	CMM_0315			FALSE	0.102	83.000	0.000	NA		NA
3749222	3749223	CMM_0315	CMM_0316		clpY	TRUE	0.575	67.000	0.000	1.000	Y	NA
3749226	3749227	CMM_0319	CMM_0320			FALSE	0.115	67.000	0.000	NA		NA
3749228	3749229	CMM_0321	CMM_0322			TRUE	0.652	8.000	0.000	1.000	N	NA
3749229	3749230	CMM_0322	CMM_0323			TRUE	0.674	-3.000	0.000	1.000		NA
3749231	3749232	CMM_0324	CMM_0325			TRUE	0.997	0.000	0.686	0.008	Y	NA
3749232	3749233	CMM_0325	CMM_0326			TRUE	0.674	-3.000	0.000	1.000		NA
3749233	3749234	CMM_0326	CMM_0327			TRUE	0.674	-3.000	0.000	1.000		NA
3749234	3749235	CMM_0327	CMM_0328			FALSE	0.509	98.000	0.000	1.000	Y	NA
3749235	3749236	CMM_0328	CMM_0329			TRUE	0.589	-3.000	0.000	NA		NA
3749236	3749237	CMM_0329	CMM_0330		npsB	TRUE	0.589	-3.000	0.000	NA		NA
3749237	3749238	CMM_0330	CMM_0331	npsB	npsA	TRUE	0.996	-3.000	0.571	0.002	Y	NA
3749239	3749240	CMM_0332	CMM_0333			TRUE	0.924	-7.000	0.000	1.000	Y	NA
3749240	3749241	CMM_0333	CMM_0334			TRUE	0.577	11.000	0.000	1.000	N	NA
3749242	3749243	CMM_0335	CMM_0336			FALSE	0.540	-7.000	0.000	NA		NA
3749243	3749244	CMM_0336	CMM_0337			FALSE	0.172	37.000	0.000	NA		NA
3749244	3749245	CMM_0337	CMM_0338			FALSE	0.034	169.000	0.000	NA		NA
3749245	3749246	CMM_0338	CMM_0339			FALSE	0.021	206.000	0.000	NA		NA
3749246	3749247	CMM_0339	CMM_0340			FALSE	0.095	90.000	0.000	NA		NA
3749247	3749248	CMM_0340	CMM_0341			TRUE	0.991	-3.000	1.000	NA		NA
3749248	3749249	CMM_0341	CMM_0342			TRUE	0.589	-3.000	0.000	NA		NA
3749249	3749250	CMM_0342	CMM_0343			FALSE	0.027	182.000	0.000	NA		NA
3749250	3749251	CMM_0343	CMM_0344			FALSE	0.021	201.000	0.000	NA		NA
3749251	3749252	CMM_0344	CMM_0345			FALSE	0.055	162.000	0.000	1.000		NA
3749252	3749253	CMM_0345	CMM_0346			FALSE	0.017	226.000	0.000	NA		NA
3749253	3749254	CMM_0346	CMM_0347		manX	FALSE	0.018	222.000	0.000	NA		NA
3749254	3749255	CMM_0347	CMM_0348	manX	bglY	TRUE	0.822	64.000	0.154	1.000	Y	NA
3749255	3749256	CMM_0348	CMM_0349	bglY		TRUE	0.973	-3.000	0.077	1.000	Y	NA
3749257	3749258	CMM_0350	CMM_0351			FALSE	0.540	76.000	0.000	NA	Y	NA
3749258	3749259	CMM_0351	CMM_0352			TRUE	0.997	-3.000	0.882	0.077	Y	NA
3749259	3749260	CMM_0352	CMM_0353			TRUE	0.998	-3.000	1.000	0.077	Y	NA
3749260	3749261	CMM_0353	CMM_0354		nagB	TRUE	0.937	-3.000	0.000	1.000	Y	NA
3749261	3749262	CMM_0354	CMM_0355	nagB	bgaA	TRUE	0.571	74.000	0.000	1.000	Y	NA
3749264	3749265	CMM_0357	CMM_0358			FALSE	0.038	163.000	0.000	NA		NA
3749265	3749266	CMM_0358	CMM_0359			FALSE	0.064	194.000	0.000	1.000	N	NA
3749266	3749267	CMM_0359	CMM_0360			TRUE	0.997	-3.000	0.778	0.077	Y	NA
3749267	3749268	CMM_0360	CMM_0361			TRUE	0.997	-3.000	0.778	0.077	Y	NA
3749268	3749269	CMM_0361	CMM_0362			FALSE	0.554	80.000	0.000	1.000	Y	NA
3749269	3749270	CMM_0362	CMM_0363			FALSE	0.200	114.000	0.000	1.000	N	NA
3749270	3749271	CMM_0363	CMM_0364			TRUE	0.997	-3.000	1.000	1.000	Y	NA
3749271	3749272	CMM_0364	CMM_0365			TRUE	0.994	-3.000	0.667	1.000	Y	NA
3749272	3749273	CMM_0365	CMM_0366			FALSE	0.266	75.000	0.000	1.000	N	NA
3749273	3749274	CMM_0366	CMM_0367		phnD	FALSE	0.116	156.000	0.000	1.000	N	NA
3749274	3749275	CMM_0367	CMM_0368	phnD	phnC	TRUE	0.954	22.000	0.176	0.004	Y	NA
3749275	3749276	CMM_0368	CMM_0369	phnC	phnE	TRUE	0.987	-3.000	0.176	0.096	Y	NA
3749276	3749277	CMM_0369	CMM_0370	phnE	panE	TRUE	0.803	-3.000	0.000	1.000	N	NA
3749278	3749279	CMM_0371	CMM_0372	phnX	phnN	TRUE	0.847	-3.000	0.041	NA		NA
3749279	3749280	CMM_0372	CMM_0373	phnN	phnM	TRUE	0.981	-3.000	0.173	NA	Y	NA
3749280	3749281	CMM_0373	CMM_0374	phnM	phnV	TRUE	0.589	-3.000	0.000	NA		NA
3749281	3749282	CMM_0374	CMM_0375	phnV	phnL	TRUE	0.589	-3.000	0.000	NA		NA
3749282	3749283	CMM_0375	CMM_0376	phnL	phnK	TRUE	0.997	-3.000	0.859	0.032	Y	NA
3749283	3749284	CMM_0376	CMM_0377	phnK	phnJ	TRUE	0.996	-3.000	0.883	1.000	Y	NA
3749284	3749285	CMM_0377	CMM_0378	phnJ	phnI	TRUE	0.996	-3.000	0.880	1.000	Y	NA
3749285	3749286	CMM_0378	CMM_0379	phnI	phnH	TRUE	0.998	0.000	0.960	0.004	Y	NA
3749286	3749287	CMM_0379	CMM_0380	phnH	phnG	TRUE	0.998	-3.000	0.967	0.004	Y	NA
3749288	3749289	CMM_0381	CMM_0382	phnF		FALSE	0.220	100.000	0.000	1.000	N	NA
3749289	3749290	CMM_0382	CMM_0383		ppcA	FALSE	0.217	105.000	0.000	1.000	N	NA
3749291	3749292	CMM_0384	CMM_0385		ltaE	FALSE	0.131	148.000	0.000	1.000	N	NA
3749292	3749293	CMM_0385	CMM_0386	ltaE		FALSE	0.231	37.000	0.000	1.000		NA
3749293	3749294	CMM_0386	CMM_0387			FALSE	0.158	71.000	0.000	1.000		NA
3749295	3749296	CMM_0388	CMM_0389		aqpZ	FALSE	0.018	223.000	0.000	NA		NA
3749296	3749297	CMM_0389	CMM_0390	aqpZ		FALSE	0.091	95.000	0.000	NA		NA
3749298	3749299	CMM_0391	CMM_0392			FALSE	0.094	91.000	0.000	NA		NA
3749299	3749300	CMM_0392	CMM_0393			FALSE	0.138	47.000	0.000	NA		NA
3749300	3749301	CMM_0393	CMM_0394			TRUE	0.858	50.000	0.636	NA		NA
3749301	3749302	CMM_0394	CMM_0395			FALSE	0.091	97.000	0.000	NA		NA
3749302	3749303	CMM_0395	CMM_0396			TRUE	0.589	-3.000	0.000	NA		NA
3749303	3749304	CMM_0396	CMM_0397			TRUE	0.964	-3.000	0.292	NA		NA
3749306	3749307	CMM_0399	CMM_0400			TRUE	0.767	-3.000	0.000	NA	N	NA
3749311	3749312	CMM_0404	CMM_0405			TRUE	0.997	-3.000	0.786	0.020	Y	NA
3749317	3749318	CMM_0410	CMM_0411			FALSE	0.024	191.000	0.000	NA		NA
3749318	3749319	CMM_0411	CMM_0412			FALSE	0.280	14.000	0.000	NA		NA
3749321	3749322	CMM_0414	CMM_0415		osmC	TRUE	0.759	77.000	0.286	1.000	N	NA
3749322	3749323	CMM_0415	CMM_0416	osmC		TRUE	0.860	0.000	0.037	NA		NA
3749323	3749324	CMM_0416	CMM_0417			FALSE	0.058	138.000	0.000	NA		NA
3749325	3749326	CMM_0418	CMM_0419			FALSE	0.260	17.000	0.000	NA		NA
3749326	3749327	CMM_0419	CMM_0420			FALSE	0.100	84.000	0.000	NA		NA
3749327	3749328	CMM_0420	CMM_0421			TRUE	0.997	-3.000	0.865	0.076	Y	NA
3749328	3749329	CMM_0421	CMM_0422			TRUE	0.965	-3.000	0.048	1.000	Y	NA
3749329	3749330	CMM_0422	CMM_0423			TRUE	0.873	94.000	0.400	NA	Y	NA
3749330	3749331	CMM_0423	CMM_0424			TRUE	0.592	167.000	0.200	NA	Y	NA
3749331	3749332	CMM_0424	CMM_0425			TRUE	0.843	126.000	0.750	1.000	N	NA
3749333	3749334	CMM_0426	CMM_0427			FALSE	0.006	1891.000	0.000	1.000		NA
3749334	3749335	CMM_0427	CMM_0428			FALSE	0.028	213.000	0.000	1.000		NA
3749336	3749337	CMM_0429	CMM_0430			FALSE	0.129	92.000	0.000	1.000		NA
3749337	3749338	CMM_0430	CMM_0431			FALSE	0.149	170.000	0.000	0.007		NA
3749340	3749341	CMM_0433	CMM_0434	fepG	fepD	TRUE	0.998	-3.000	1.000	0.076	Y	NA
3749345	3749346	CMM_0438	CMM_0439		padA	TRUE	0.629	0.000	0.000	NA		NA
3749347	3749348	CMM_0440	CMM_0441			FALSE	0.071	126.000	0.000	NA		NA
3749348	3749349	CMM_0441	CMM_0442			FALSE	0.115	65.000	0.000	NA		NA
3749350	3749351	CMM_0443	CMM_0444			TRUE	0.674	-3.000	0.000	1.000		NA
3749353	3749354	CMM_0446	CMM_0447			TRUE	0.629	0.000	0.000	NA		NA
3749354	3749355	CMM_0447	CMM_0448			FALSE	0.253	18.000	0.000	NA		NA
3749355	3749356	CMM_0448	CMM_0449			FALSE	0.417	7.000	0.000	NA		NA
3749356	3749357	CMM_0449	CMM_0450			FALSE	0.094	91.000	0.000	NA		NA
3749357	3749358	CMM_0450	CMM_0451			TRUE	0.589	-3.000	0.000	NA		NA
3749358	3749359	CMM_0451	CMM_0452			FALSE	0.058	138.000	0.000	NA		NA
3749360	3749361	CMM_0453	CMM_0454	pitA		TRUE	0.774	12.000	0.100	NA		NA
3749361	3749362	CMM_0454	CMM_0455			FALSE	0.561	3.000	0.000	NA		NA
3749364	3749365	CMM_0457	CMM_0458			TRUE	0.982	-3.000	0.588	1.000		NA
3749365	3749366	CMM_0458	CMM_0459			FALSE	0.076	120.000	0.000	NA		NA
3749369	3749370	CMM_0462	CMM_0463			FALSE	0.057	139.000	0.000	NA		NA
3749370	3749371	CMM_0463	CMM_0464			FALSE	0.135	88.000	0.000	1.000		NA
3749373	3749374	CMM_0465	CMM_0466			FALSE	0.185	34.000	0.000	NA		NA
3749374	3749375	CMM_0466	CMM_0467			FALSE	0.356	10.000	0.000	NA		NA
3749375	3749376	CMM_0467	CMM_0468			FALSE	0.165	39.000	0.000	NA		NA
3749379	3749380	CMM_0471	CMM_0472			FALSE	0.155	42.000	0.000	NA		NA
3749381	3749382	CMM_0473	CMM_0474			FALSE	0.066	130.000	0.000	NA		NA
3749382	3749383	CMM_0474	CMM_0475		xthB	FALSE	0.096	89.000	0.000	NA		NA
3749383	3749384	CMM_0475	CMM_0476	xthB		FALSE	0.004	3976.000	0.000	NA		NA
3749384	3749385	CMM_0476	CMM_0477			TRUE	0.589	-3.000	0.000	NA		NA
3749385	3749386	CMM_0477	CMM_0478		sigZ	TRUE	0.907	-3.000	0.071	1.000		NA
3749387	3749388	CMM_0479	CMM_0480			FALSE	0.031	173.000	0.000	NA		NA
3749388	3749389	CMM_0480	CMM_0481		pyrE	FALSE	0.270	67.000	0.000	1.000	N	NA
3749389	3749390	CMM_0481	CMM_0482	pyrE		TRUE	0.629	0.000	0.000	NA		NA
3749390	3749391	CMM_0482	CMM_0483			FALSE	0.088	107.000	0.000	NA		NA
3749395	3749396	CMM_0487	CMM_0488		recQ2	FALSE	0.096	89.000	0.000	NA		NA
3749398	3749399	CMM_0490	CMM_0491			FALSE	0.041	159.000	0.000	NA		NA
3749399	3749400	CMM_0491	CMM_0492			FALSE	0.109	78.000	0.000	NA		NA
3749402	3749403	CMM_0494	CMM_0495			TRUE	0.988	-3.000	0.667	1.000	N	NA
3749403	3749404	CMM_0495	CMM_0496			FALSE	0.009	358.000	0.000	NA		NA
3749404	3749405	CMM_0496	CMM_0497			TRUE	0.743	0.000	0.010	NA		NA
3749405	3749406	CMM_0497	CMM_0498			TRUE	0.912	-3.000	0.089	NA		NA
3749406	3749407	CMM_0498	CMM_0499			FALSE	0.287	56.000	0.000	1.000	N	NA
3749407	3749408	CMM_0499	CMM_0500			TRUE	0.803	-3.000	0.000	1.000	N	NA
3749409	3749410	CMM_0501	CMM_0502			TRUE	0.674	-3.000	0.000	1.000		NA
3749412	3749413	CMM_0504	CMM_0505		alkB	FALSE	0.027	284.000	0.000	NA	N	NA
3749413	3749414	CMM_0505	CMM_0506	alkB		FALSE	0.115	65.000	0.000	NA		NA
3749416	3749417	CMM_0508	CMM_0509			FALSE	0.115	68.000	0.000	NA		NA
3749417	3749418	CMM_0509	CMM_0510			TRUE	0.604	1.000	0.000	NA		NA
3749420	3749421	CMM_0512	CMM_0513		pgmA	FALSE	0.082	113.000	0.000	NA		NA
3749422	3749423	CMM_0514	CMM_0515	pheA	serS	FALSE	0.348	62.000	0.013	1.000	N	NA
3749423	3749424	CMM_0515	CMM_0516	serS		TRUE	0.918	-3.000	0.084	1.000		NA
3749424	3749425	CMM_0516	CMM_tRNA_0004			FALSE	0.030	174.000	0.000	NA		NA
3749425	3749426	CMM_tRNA_0004	CMM_0517			FALSE	0.073	125.000	0.000	NA		NA
3749426	3749427	CMM_0517	CMM_tRNA_0005			FALSE	0.007	401.000	0.000	NA		NA
3749427	3749428	CMM_tRNA_0005	CMM_0518			FALSE	0.105	81.000	0.000	NA		NA
3749428	3749429	CMM_0518	CMM_0519			FALSE	0.117	62.000	0.000	NA		NA
3749429	3749430	CMM_0519	CMM_0520			FALSE	0.033	170.000	0.000	NA		NA
3749430	3749431	CMM_0520	CMM_0521			TRUE	0.941	18.000	0.688	NA		NA
3749431	3749432	CMM_0521	CMM_0522			FALSE	0.093	92.000	0.000	NA		NA
3749435	3749436	CMM_PS_13	CMM_0524			FALSE	0.122	58.000	0.000	NA		NA
3749436	3749437	CMM_0524	CMM_0525			TRUE	0.986	-3.000	0.692	NA		NA
3749438	3749439	CMM_0526	CMM_0527			FALSE	0.089	103.000	0.000	NA		NA
3749439	3749440	CMM_0527	CMM_0528			FALSE	0.115	65.000	0.000	NA		NA
3749440	3749441	CMM_0528	CMM_0529			FALSE	0.082	113.000	0.000	NA		NA
3749441	3749442	CMM_0529	CMM_0530			FALSE	0.253	18.000	0.000	NA		NA
3749442	3749443	CMM_0530	CMM_0531		plsC	FALSE	0.222	97.000	0.000	1.000	N	NA
3749448	3749449	CMM_0536	CMM_0537			FALSE	0.035	321.000	0.000	0.087		NA
3749449	3749450	CMM_0537	CMM_0538		upp	FALSE	0.011	397.000	0.000	1.000		NA
3749453	3749454	CMM_0541	CMM_0542			TRUE	0.932	-3.000	0.118	1.000		NA
3749457	3749458	CMM_0545	CMM_0546	trkA	trkG	TRUE	0.958	65.000	0.585	0.004	Y	NA
3749459	3749460	CMM_0547	CMM_0548			FALSE	0.261	123.000	0.039	1.000		NA
3749462	3749463	CMM_0550	CMM_0551			FALSE	0.253	35.000	0.007	NA		NA
3749463	3749464	CMM_0551	CMM_0552			FALSE	0.117	62.000	0.000	NA		NA
3749464	3749465	CMM_0552	CMM_0553			FALSE	0.115	113.000	0.000	1.000		NA
3749465	3749466	CMM_0553	CMM_0554			TRUE	0.589	-3.000	0.000	NA		NA
3749466	3749467	CMM_0554	CMM_0555			TRUE	0.589	-3.000	0.000	NA		NA
3749468	3749469	CMM_0556	CMM_0557			FALSE	0.106	80.000	0.000	NA		NA
3749469	3749470	CMM_0557	CMM_0558			FALSE	0.108	79.000	0.000	NA		NA
3749470	3749471	CMM_0558	CMM_0559			FALSE	0.029	178.000	0.000	NA		NA
3749471	3749472	CMM_0559	CMM_0560			FALSE	0.540	-7.000	0.000	NA		NA
3749472	3749473	CMM_0560	CMM_0561		aspS	FALSE	0.066	176.000	0.000	NA	N	NA
3749474	3749475	CMM_0562	CMM_0563			TRUE	0.854	-3.000	0.033	1.000		NA
3749475	3749476	CMM_0563	CMM_0564			TRUE	0.996	-3.000	0.551	0.001	Y	NA
3749477	3749478	CMM_0565	CMM_0566			FALSE	0.076	120.000	0.000	NA		NA
3749478	3749479	CMM_0566	CMM_0567		sigB	FALSE	0.016	552.000	0.000	1.000	N	NA
3749480	3749481	CMM_0568	CMM_0569		ccbD	TRUE	0.796	0.000	0.000	NA	N	NA
3749481	3749482	CMM_0569	CMM_0570	ccbD	ccdA	TRUE	0.941	1.000	0.000	1.000	Y	NA
3749482	3749483	CMM_0570	CMM_0571	ccdA	resB	TRUE	0.945	-16.000	0.033	NA	Y	NA
3749483	3749484	CMM_0571	CMM_0572	resB	resC	TRUE	0.984	-3.000	0.213	NA	Y	NA
3749486	3749487	CMM_0574	CMM_0575			FALSE	0.199	44.000	0.000	1.000		NA
3749487	3749488	CMM_0575	CMM_0576		menB	FALSE	0.144	82.000	0.000	1.000		NA
3749488	3749489	CMM_0576	CMM_0577	menB	menE	TRUE	0.839	26.000	0.193	1.000	N	NA
3749490	3749491	CMM_0578	CMM_0579			TRUE	0.975	-3.000	0.400	1.000		NA
3749495	3749496	CMM_0583	CMM_0584			FALSE	0.106	160.000	0.000	1.000	N	NA
3749496	3749497	CMM_0584	CMM_0585			TRUE	0.926	14.000	0.049	0.019	Y	NA
3749497	3749498	CMM_0585	CMM_0586		hemA	FALSE	0.285	57.000	0.000	1.000	N	NA
3749499	3749500	CMM_0587	CMM_0588	hemE	hemY	TRUE	0.978	-7.000	0.049	0.001	Y	NA
3749500	3749501	CMM_0588	CMM_0589	hemY		FALSE	0.069	128.000	0.000	NA		NA
3749501	3749502	CMM_0589	CMM_0590			FALSE	0.188	33.000	0.000	NA		NA
3749502	3749503	CMM_0590	CMM_0591			FALSE	0.534	-10.000	0.000	NA		NA
3749503	3749504	CMM_0591	CMM_0592			FALSE	0.238	22.000	0.000	NA		NA
3749504	3749505	CMM_0592	CMM_0593			FALSE	0.097	88.000	0.000	NA		NA
3749505	3749506	CMM_0593	CMM_0594			FALSE	0.117	62.000	0.000	NA		NA
3749506	3749507	CMM_0594	CMM_0595		hemH	TRUE	0.856	0.000	0.034	NA		NA
3749507	3749508	CMM_0595	CMM_0596	hemH	hemC	TRUE	0.950	-3.000	0.015	1.000	Y	NA
3749508	3749509	CMM_0596	CMM_0597	hemC	hemD	TRUE	0.991	-3.000	0.205	0.002	Y	NA
3749509	3749510	CMM_0597	CMM_0598	hemD	hemB	TRUE	0.984	-3.000	0.071	0.002	Y	NA
3749510	3749511	CMM_0598	CMM_0599	hemB	hemL	TRUE	0.826	83.000	0.067	0.002	Y	NA
3749512	3749513	CMM_0600	CMM_0601		hemO	FALSE	0.241	84.000	0.000	1.000	N	NA
3749513	3749514	CMM_0601	CMM_0602	hemO		FALSE	0.112	76.000	0.000	NA		NA
3749514	3749515	CMM_0602	CMM_0603			FALSE	0.168	85.000	0.012	NA		NA
3749515	3749516	CMM_0603	CMM_0604		pfkA	FALSE	0.398	33.000	0.000	1.000	N	NA
3749521	3749522	CMM_0609	CMM_0610			FALSE	0.394	99.000	0.000	0.032	N	NA
3749522	3749523	CMM_0610	CMM_0611			FALSE	0.215	107.000	0.000	1.000	N	NA
3749524	3749525	CMM_0612	CMM_0613		sacC	FALSE	0.092	93.000	0.000	NA		NA
3749526	3749527	CMM_0614	CMM_0615	sacB		FALSE	0.100	84.000	0.000	NA		NA
3749527	3749528	CMM_0615	CMM_0616			FALSE	0.299	172.000	0.200	NA		NA
3749528	3749529	CMM_0616	CMM_0617			TRUE	0.950	-3.000	0.200	NA		NA
3749531	3749532	CMM_0619	CMM_0620	putA		FALSE	0.238	22.000	0.000	NA		NA
3749532	3749533	CMM_0620	CMM_0621			TRUE	0.589	-3.000	0.000	NA		NA
3749533	3749534	CMM_0621	CMM_0622			FALSE	0.227	24.000	0.000	NA		NA
3749535	3749536	CMM_0623	CMM_0624		npsC	TRUE	0.985	-3.000	0.667	1.000		NA
3749536	3749537	CMM_0624	CMM_0625	npsC		FALSE	0.269	72.000	0.000	1.000	N	NA
3749542	3749543	CMM_0629	CMM_0630		rocD	TRUE	0.674	39.000	0.000	1.000	Y	NA
3749543	3749544	CMM_0630	CMM_0631	rocD		FALSE	0.075	121.000	0.000	NA		NA
3749544	3749545	CMM_0631	CMM_0632			FALSE	0.198	31.000	0.000	NA		NA
3749546	3749547	CMM_0633	CMM_0634			FALSE	0.115	65.000	0.000	NA		NA
3749547	3749548	CMM_0634	CMM_0635			FALSE	0.097	88.000	0.000	NA		NA
3749548	3749549	CMM_0635	CMM_0636			TRUE	0.589	-3.000	0.000	NA		NA
3749549	3749550	CMM_0636	CMM_0637			TRUE	0.589	-3.000	0.000	NA		NA
3749551	3749552	CMM_0638	CMM_0639			FALSE	0.167	58.000	0.000	1.000		NA
3749552	3749553	CMM_0639	CMM_0640			FALSE	0.037	164.000	0.000	NA		NA
3749553	3749554	CMM_0640	CMM_0641			FALSE	0.561	3.000	0.000	NA		NA
3749554	3749555	CMM_0641	CMM_0642			FALSE	0.065	132.000	0.000	NA		NA
3749555	3749556	CMM_0642	CMM_0643			FALSE	0.024	192.000	0.000	NA		NA
3749557	3749558	CMM_0644	CMM_0645			TRUE	0.996	-3.000	0.611	0.020	Y	NA
3749558	3749559	CMM_0645	CMM_0646			FALSE	0.115	66.000	0.000	NA		NA
3749559	3749560	CMM_0646	CMM_0647			FALSE	0.089	105.000	0.000	NA		NA
3749561	3749562	CMM_0648	CMM_0649			FALSE	0.005	727.000	0.000	NA		NA
3749563	3749564	CMM_0650	CMM_0651			FALSE	0.526	80.000	0.000	NA	Y	NA
3749564	3749565	CMM_0651	CMM_0652		qorA	TRUE	0.609	45.000	0.000	NA	Y	NA
3749566	3749567	CMM_0653	CMM_0654	cysK	cysE	TRUE	0.995	3.000	0.483	0.002	Y	NA
3749567	3749568	CMM_0654	CMM_0655	cysE		TRUE	0.829	0.000	0.000	1.000	N	NA
3749568	3749569	CMM_0655	CMM_0656			FALSE	0.194	32.000	0.000	NA		NA
3749573	3749574	CMM_0660	CMM_PS_15			FALSE	0.136	48.000	0.000	NA		NA
3749574	3749575	CMM_PS_15	CMM_0661			FALSE	0.013	273.000	0.000	NA		NA
3749579	3749580	CMM_0665	CMM_0666	fdxA		TRUE	0.861	-3.000	0.000	0.037		NA
3749582	3749583	CMM_0668	CMM_0669			TRUE	0.589	-3.000	0.000	NA		NA
3749584	3749585	CMM_0670	CMM_0671			FALSE	0.098	87.000	0.000	NA		NA
3749585	3749586	CMM_0671	CMM_0672			TRUE	0.959	-3.000	0.261	NA		NA
3749586	3749587	CMM_0672	CMM_0673			TRUE	0.589	-3.000	0.000	NA		NA
3749587	3749588	CMM_0673	CMM_0674			FALSE	0.275	94.000	0.000	0.070		NA
3749590	3749591	CMM_0676	CMM_0677	sbcC	sbcD	TRUE	0.995	0.000	0.669	NA	Y	NA
3749592	3749593	CMM_0678	CMM_0679	pknC		FALSE	0.115	70.000	0.000	NA		NA
3749593	3749594	CMM_0679	CMM_0680			TRUE	0.767	-3.000	0.000	NA	N	NA
3749594	3749595	CMM_0680	CMM_0681		fabB	TRUE	0.954	-3.000	0.022	1.000	Y	NA
3749595	3749596	CMM_0681	CMM_0682	fabB	ilvG	TRUE	0.803	-3.000	0.000	1.000	N	NA
3749596	3749597	CMM_0682	CMM_0683	ilvG	coaBC	TRUE	0.674	-3.000	0.000	1.000		NA
3749597	3749598	CMM_0683	CMM_0684	coaBC		TRUE	0.629	-7.000	0.000	1.000		NA
3749598	3749599	CMM_0684	CMM_0685			TRUE	0.937	-3.000	0.000	1.000	Y	NA
3749599	3749600	CMM_0685	CMM_0686			FALSE	0.017	225.000	0.000	NA		NA
3749602	3749603	CMM_0688	CMM_0689		purA	FALSE	0.434	83.000	0.082	NA		NA
3749603	3749604	CMM_0689	CMM_0690	purA		FALSE	0.092	93.000	0.000	NA		NA
3749606	3749607	CMM_0692	CMM_0693			FALSE	0.112	76.000	0.000	NA		NA
3749610	3749611	CMM_0696	CMM_0697			FALSE	0.318	46.000	0.000	1.000	N	NA
3749611	3749612	CMM_0697	CMM_0698			TRUE	0.934	20.000	0.667	NA		NA
3749612	3749613	CMM_0698	CMM_0699			FALSE	0.115	67.000	0.000	NA		NA
3749613	3749614	CMM_0699	CMM_0700			TRUE	0.993	-3.000	0.545	1.000	Y	NA
3749615	3749616	CMM_0701	CMM_0702			FALSE	0.114	72.000	0.000	NA		NA
11419336	3749602		CMM_0688			FALSE	NA	9078.000	0.000	NA		NA
11561699	3749602		CMM_0688			FALSE	NA	9078.000	0.000	NA		NA
11704091	3749602		CMM_0688			FALSE	NA	9078.000	0.000	NA		NA
11419337	3749602		CMM_0688			FALSE	NA	9101.000	0.000	NA		NA
11561700	3749602		CMM_0688			FALSE	NA	9101.000	0.000	NA		NA
11704092	3749602		CMM_0688			FALSE	NA	9101.000	0.000	NA		NA
11419338	3749616		CMM_0702			FALSE	NA	397.000	0.000	NA		NA
11561701	3749616		CMM_0702			FALSE	NA	397.000	0.000	NA		NA
11704093	3749616		CMM_0702			FALSE	NA	397.000	0.000	NA		NA
11419339	3749616		CMM_0702			FALSE	NA	378.000	0.000	NA		NA
11561702	3749616		CMM_0702			FALSE	NA	378.000	0.000	NA		NA
11704094	3749616		CMM_0702			FALSE	NA	378.000	0.000	NA		NA
11419340	3749616		CMM_0702			FALSE	NA	355.000	0.000	NA		NA
11561703	3749616		CMM_0702			FALSE	NA	355.000	0.000	NA		NA
11704095	3749616		CMM_0702			FALSE	NA	355.000	0.000	NA		NA
11419341	3749616		CMM_0702			FALSE	NA	327.000	0.000	NA		NA
11561704	3749616		CMM_0702			FALSE	NA	327.000	0.000	NA		NA
11704096	3749616		CMM_0702			FALSE	NA	327.000	0.000	NA		NA
11419342	3749616		CMM_0702			FALSE	NA	304.000	0.000	NA		NA
11561705	3749616		CMM_0702			FALSE	NA	304.000	0.000	NA		NA
11704097	3749616		CMM_0702			FALSE	NA	304.000	0.000	NA		NA
11419343	3749616		CMM_0702			FALSE	NA	285.000	0.000	NA		NA
11561706	3749616		CMM_0702			FALSE	NA	285.000	0.000	NA		NA
11704098	3749616		CMM_0702			FALSE	NA	285.000	0.000	NA		NA
11419344	3749616		CMM_0702			FALSE	NA	262.000	0.000	NA		NA
11561707	3749616		CMM_0702			FALSE	NA	262.000	0.000	NA		NA
11704099	3749616		CMM_0702			FALSE	NA	262.000	0.000	NA		NA
3749617	3749618	CMM_0703	CMM_0704			FALSE	0.008	368.000	0.000	NA		NA
3749619	3749620	CMM_0705	CMM_0706		pbpB	FALSE	0.086	110.000	0.000	NA		NA
3749620	3749621	CMM_0706	CMM_0707	pbpB		TRUE	0.810	54.000	0.333	1.000	N	NA
3749621	3749622	CMM_0707	CMM_0708			TRUE	0.996	-3.000	0.625	0.019	Y	NA
3749622	3749623	CMM_0708	CMM_0709			FALSE	0.071	183.000	0.000	1.000	N	NA
3749623	3749624	CMM_0709	CMM_0710		tyrA	FALSE	0.245	83.000	0.000	1.000	N	NA
3749625	3749626	CMM_0711	CMM_0712			FALSE	0.095	90.000	0.000	NA		NA
3749626	3749627	CMM_0712	CMM_0713			FALSE	0.120	59.000	0.000	NA		NA
3749627	3749628	CMM_0713	CMM_0714			FALSE	0.042	158.000	0.000	NA		NA
3749628	3749629	CMM_0714	CMM_0715		wzy2	TRUE	0.589	-3.000	0.000	NA		NA
3749629	3749630	CMM_0715	CMM_0716	wzy2	wcnG	FALSE	0.528	-21.000	0.000	NA		NA
3749630	3749631	CMM_0716	CMM_0717	wcnG	wzx2	TRUE	0.589	-3.000	0.000	NA		NA
3749631	3749632	CMM_0717	CMM_0718	wzx2	wcnE	TRUE	0.589	-3.000	0.000	NA		NA
3749632	3749633	CMM_0718	CMM_0719	wcnE	wcnD	TRUE	0.969	0.000	0.000	0.018	Y	NA
3749633	3749634	CMM_0719	CMM_0720	wcnD	wcnC	TRUE	0.940	0.000	0.000	NA	Y	NA
3749634	3749635	CMM_0720	CMM_0721	wcnC	wzb	FALSE	0.192	91.000	0.000	NA	N	NA
3749635	3749636	CMM_0721	CMM_0722	wzb	wzc	TRUE	0.924	10.000	0.235	1.000	N	NA
3749638	3749639	CMM_0724	CMM_0725	wcnA		FALSE	0.129	92.000	0.000	1.000		NA
3749639	3749640	CMM_0725	CMM_0726			FALSE	0.021	201.000	0.000	NA		NA
3749640	3749641	CMM_0726	CMM_0727			FALSE	0.014	251.000	0.000	NA		NA
3749641	3749642	CMM_0727	CMM_0728		purL	TRUE	0.803	-3.000	0.000	1.000	N	NA
3749642	3749643	CMM_0728	CMM_0729	purL	purQ	TRUE	0.994	-3.000	0.346	0.001	Y	NA
3749643	3749644	CMM_0729	CMM_0730	purQ	purS	TRUE	0.997	0.000	0.656	0.001	Y	NA
3749644	3749645	CMM_0730	CMM_0731	purS		FALSE	0.105	121.000	0.000	1.000		NA
3749650	3749651	CMM_0736	CMM_0737	furA	katA	TRUE	0.803	79.000	0.143	1.000	Y	NA
3749652	3749653	CMM_0738	CMM_0739			FALSE	0.006	464.000	0.000	NA		NA
3749653	3749654	CMM_0739	CMM_0740			TRUE	0.636	15.000	0.000	0.018		NA
3749655	3749656	CMM_0741	CMM_0742			TRUE	0.589	-3.000	0.000	NA		NA
3749656	3749657	CMM_0742	CMM_0743			TRUE	0.589	-3.000	0.000	NA		NA
3749660	3749661	CMM_0746	CMM_0747	prkA		FALSE	0.270	69.000	0.000	1.000	N	NA
3749661	3749662	CMM_0747	CMM_0748			FALSE	0.384	119.000	0.000	0.006	N	NA
3749664	3749665	CMM_0750	CMM_0751			TRUE	0.947	-3.000	0.189	NA		NA
3749667	3749668	CMM_0753	CMM_0754	purC	purD	TRUE	0.953	-3.000	0.021	1.000	Y	NA
3749669	3749670	CMM_0755	CMM_0756			FALSE	0.118	60.000	0.000	NA		NA
3749675	3749676	CMM_0761	CMM_0762			FALSE	0.096	89.000	0.000	NA		NA
3749677	3749678	CMM_0763	CMM_0764		ppaF	FALSE	0.057	160.000	0.000	1.000		NA
3749678	3749679	CMM_0764	CMM_0765	ppaF		FALSE	0.115	113.000	0.000	1.000		NA
3749679	3749680	CMM_0765	CMM_0766			FALSE	0.070	127.000	0.000	NA		NA
3749681	3749682	CMM_0767	CMM_0768			FALSE	0.253	18.000	0.000	NA		NA
3749683	3749684	CMM_0769	CMM_0770			FALSE	0.012	1339.000	0.000	1.000	N	NA
3749684	3749685	CMM_0770	CMM_0771			TRUE	0.650	43.000	0.000	1.000	Y	NA
3749685	3749686	CMM_0771	CMM_0772			TRUE	0.611	34.000	0.000	0.018	N	NA
3749686	3749687	CMM_0772	CMM_0773			FALSE	0.128	53.000	0.000	NA		NA
3749687	3749688	CMM_0773	CMM_0774			FALSE	0.057	139.000	0.000	NA		NA
3749688	3749689	CMM_0774	CMM_0775			TRUE	0.983	-3.000	0.179	1.000	Y	NA
3749689	3749690	CMM_0775	CMM_0776			FALSE	0.514	54.000	0.049	1.000	N	NA
3749690	3749691	CMM_0776	CMM_0777			FALSE	0.355	60.000	0.013	1.000	N	NA
3749691	3749692	CMM_0777	CMM_0778			TRUE	0.854	-3.000	0.013	1.000	N	NA
3749694	3749695	CMM_0780	CMM_0781			TRUE	0.941	-3.000	0.105	NA	N	NA
3749697	3749698	CMM_0783	CMM_0784			FALSE	0.090	101.000	0.000	NA		NA
3749699	3749700	CMM_0785	CMM_0786		tpiB	FALSE	0.305	49.000	0.000	1.000	N	NA
3749700	3749701	CMM_0786	CMM_0787	tpiB	rpiB	TRUE	0.951	5.000	0.062	1.000	Y	NA
3749701	3749702	CMM_0787	CMM_0788	rpiB	dakA	TRUE	0.899	50.000	0.300	1.000	Y	NA
3749702	3749703	CMM_0788	CMM_0789	dakA		FALSE	0.251	81.000	0.000	1.000	N	NA
3749703	3749704	CMM_0789	CMM_0790			FALSE	0.173	54.000	0.000	1.000		NA
3749704	3749705	CMM_0790	CMM_0791			TRUE	0.674	-3.000	0.000	1.000		NA
3749705	3749706	CMM_0791	CMM_0792			TRUE	0.852	105.000	0.333	NA	Y	NA
3749706	3749707	CMM_0792	CMM_0793			FALSE	0.014	256.000	0.000	NA		NA
3749707	3749708	CMM_0793	CMM_0794			FALSE	0.537	60.000	0.095	1.000		NA
3749709	3749710	CMM_0795	CMM_0796		trxC	FALSE	0.099	86.000	0.000	NA		NA
3749710	3749711	CMM_0796	CMM_0797	trxC	recQ3	FALSE	0.204	113.000	0.000	1.000	N	NA
3749711	3749712	CMM_0797	CMM_0798	recQ3		FALSE	0.011	402.000	0.000	1.000		NA
3749712	3749713	CMM_0798	CMM_0799		bldKB	FALSE	0.069	150.000	0.000	1.000		NA
3749713	3749714	CMM_0799	CMM_0800	bldKB	bldKA	TRUE	0.996	4.000	0.857	0.071	Y	NA
3749714	3749715	CMM_0800	CMM_0801	bldKA	bldKC	TRUE	0.995	-3.000	0.571	0.071	Y	NA
3749715	3749716	CMM_0801	CMM_0802	bldKC	bldKD	TRUE	0.937	-3.000	0.000	1.000	Y	NA
3749716	3749717	CMM_0802	CMM_0803	bldKD	bldKE	TRUE	0.886	-3.000	0.000	0.003		NA
3749717	3749718	CMM_0803	CMM_0804	bldKE	pipA	TRUE	0.794	-3.000	0.015	1.000		NA
3749718	3749719	CMM_0804	CMM_0805	pipA	pepP1	TRUE	0.864	-3.000	0.000	0.032		NA
3749719	3749720	CMM_0805	CMM_0806	pepP1		FALSE	0.491	18.000	0.000	1.000	N	NA
3749720	3749721	CMM_0806	CMM_0807			FALSE	0.407	113.000	0.054	1.000	N	NA
3749721	3749722	CMM_0807	CMM_0808			TRUE	0.980	-3.000	0.324	0.036		NA
3749722	3749723	CMM_0808	CMM_0809			TRUE	0.977	-3.000	0.278	0.036		NA
3749723	3749724	CMM_0809	CMM_0810		dapX	TRUE	0.884	-3.000	0.053	1.000		NA
3749724	3749725	CMM_0810	CMM_0811	dapX		TRUE	0.901	8.000	0.018	1.000	Y	NA
3749725	3749726	CMM_0811	CMM_0812			FALSE	0.435	27.000	0.000	1.000	N	NA
3749726	3749727	CMM_0812	CMM_0813			FALSE	0.036	266.000	0.000	1.000	N	NA
3749728	3749729	CMM_0814	CMM_0815			TRUE	0.861	-3.000	0.000	0.039		NA
3749729	3749730	CMM_0815	CMM_0816			FALSE	0.157	73.000	0.000	1.000		NA
3749733	3749734	CMM_0819	CMM_0820	wcoA	wcoB	FALSE	0.011	297.000	0.000	NA		NA
3749734	3749735	CMM_0820	CMM_0821	wcoB	wcoC	FALSE	0.006	484.000	0.000	NA		NA
3749735	3749736	CMM_0821	CMM_0822	wcoC	wcoD	TRUE	0.932	2.000	0.000	NA	Y	NA
3749736	3749737	CMM_0822	CMM_0823	wcoD	wcoE	TRUE	0.674	-3.000	0.000	1.000		NA
3749737	3749738	CMM_0823	CMM_0824	wcoE	wcoF	TRUE	0.674	-3.000	0.000	1.000		NA
3749738	3749739	CMM_0824	CMM_0825	wcoF	wcoG	FALSE	0.180	50.000	0.000	1.000		NA
3749739	3749740	CMM_0825	CMM_0826	wcoG	wcoH	FALSE	0.036	165.000	0.000	NA		NA
3749740	3749741	CMM_0826	CMM_0827	wcoH	wcoI	TRUE	0.589	-3.000	0.000	NA		NA
3749741	3749742	CMM_0827	CMM_0828	wcoI		FALSE	0.005	696.000	0.000	NA		NA
3749743	3749744	CMM_0829	CMM_0830	wcoK		FALSE	0.022	200.000	0.000	NA		NA
3749745	3749746	CMM_0831	CMM_0832	wcoM	wzx3	FALSE	0.353	172.000	0.273	NA		NA
3749746	3749747	CMM_0832	CMM_0833	wzx3	wcoN	FALSE	0.053	164.000	0.000	1.000		NA
3749749	3749750	CMM_0835	CMM_0836	wcoP	wcoQ	TRUE	0.589	-3.000	0.000	NA		NA
3749753	3749754	CMM_tRNA_0007	CMM_tRNA_0008			FALSE	0.115	70.000	0.000	NA		NA
3749754	3749755	CMM_tRNA_0008	CMM_tRNA_0009			FALSE	0.238	22.000	0.000	NA		NA
3749756	3749757	CMM_0839	CMM_0840			FALSE	0.472	14.000	0.000	NA	N	NA
3749759	3749760	CMM_0842	CMM_0843		hptA	TRUE	0.971	2.000	0.137	0.040	N	NA
3749760	3749761	CMM_0843	CMM_0844	hptA	ftsH	FALSE	0.433	158.000	0.180	1.000	N	NA
3749761	3749762	CMM_0844	CMM_0845	ftsH	folE	TRUE	0.751	5.000	0.006	1.000	N	NA
3749762	3749763	CMM_0845	CMM_0846	folE	folP	TRUE	0.955	-3.000	0.023	1.000	Y	NA
3749763	3749764	CMM_0846	CMM_0847	folP		FALSE	0.469	5.000	0.000	NA		NA
3749764	3749765	CMM_0847	CMM_0848		folBK	FALSE	0.544	-6.000	0.000	NA		NA
3749765	3749766	CMM_0848	CMM_0849	folBK		TRUE	0.905	-3.000	0.081	NA		NA
3749766	3749767	CMM_0849	CMM_0850			TRUE	0.620	50.000	0.163	NA		NA
3749767	3749768	CMM_0850	CMM_0851			TRUE	0.980	-3.000	0.577	NA		NA
3749768	3749769	CMM_0851	CMM_0852			TRUE	0.883	-3.000	0.062	NA		NA
3749769	3749770	CMM_0852	CMM_0853		panC	FALSE	0.500	43.000	0.067	NA		NA
3749770	3749771	CMM_0853	CMM_0854	panC	lysS	FALSE	0.252	112.000	0.009	1.000	N	NA
3749771	3749772	CMM_0854	CMM_0855	lysS		FALSE	0.417	7.000	0.000	NA		NA
3749772	3749773	CMM_0855	CMM_0856			FALSE	0.238	22.000	0.000	NA		NA
3749773	3749774	CMM_0856	CMM_0857		clpC	FALSE	0.038	163.000	0.000	NA		NA
3749774	3749775	CMM_0857	CMM_0858	clpC	galE2	FALSE	0.094	167.000	0.000	1.000	N	NA
3749775	3749776	CMM_0858	CMM_0859	galE2		TRUE	0.803	-3.000	0.000	1.000	N	NA
3749776	3749777	CMM_0859	CMM_0860		rplJ	FALSE	0.029	302.000	0.000	1.000	N	NA
3749777	3749778	CMM_0860	CMM_0861	rplJ	rplL	TRUE	0.974	76.000	0.884	0.019	Y	NA
3749780	3749781	CMM_0863	CMM_0864			TRUE	0.630	82.000	0.145	1.000	N	NA
3749783	3749784	CMM_0866	CMM_0867			TRUE	0.919	137.000	0.670	0.070	Y	NA
3749784	3749785	CMM_0867	CMM_0868			TRUE	0.996	-3.000	0.693	0.070	Y	NA
3749785	3749786	CMM_0868	CMM_0869			FALSE	0.305	123.000	0.000	0.081	N	NA
3749787	3749788	CMM_0870	CMM_0871			TRUE	0.914	3.000	0.111	NA		NA
3749789	3749790	CMM_0872	CMM_0873	cysB	metB	TRUE	0.875	48.000	0.087	0.015	Y	NA
3749792	3749793	CMM_0875	CMM_0876		araB	FALSE	0.075	180.000	0.000	1.000	N	NA
3749793	3749794	CMM_0876	CMM_0877	araB	araD	TRUE	0.967	-3.000	0.217	1.000	N	NA
3749794	3749795	CMM_0877	CMM_0878	araD	araA	TRUE	0.979	-3.000	0.138	1.000	Y	NA
3749795	3749796	CMM_0878	CMM_0879	araA		TRUE	0.659	77.000	0.034	NA	Y	NA
3749796	3749797	CMM_0879	CMM_0880			FALSE	0.517	178.000	0.176	NA	Y	NA
3749797	3749798	CMM_0880	CMM_0881			TRUE	0.992	6.000	0.800	1.000	Y	NA
3749800	3749801	CMM_0883	CMM_0884	bglJ		TRUE	0.803	-3.000	0.000	1.000	N	NA
3749802	3749803	CMM_0885	CMM_0886			FALSE	0.073	125.000	0.000	NA		NA
3749803	3749804	CMM_0886	CMM_0887			FALSE	0.068	129.000	0.000	NA		NA
3749805	3749806	CMM_0888	CMM_0889			FALSE	0.164	132.000	0.000	1.000	N	NA
3749806	3749807	CMM_0889	CMM_0890			FALSE	0.158	41.000	0.000	NA		NA
3749808	3749809	CMM_0891	CMM_0892	strB		TRUE	0.589	-3.000	0.000	NA		NA
3749809	3749810	CMM_0892	CMM_tRNA_0010			FALSE	0.012	285.000	0.000	NA		NA
3749810	3749811	CMM_tRNA_0010	CMM_0893			FALSE	0.141	46.000	0.000	NA		NA
3749811	3749812	CMM_0893	CMM_0894			FALSE	0.014	334.000	0.000	1.000		NA
3749813	3749814	CMM_SRP_bact	CMM_0895		ptaA	FALSE	0.141	46.000	0.000	NA		NA
3749814	3749815	CMM_0895	CMM_0896	ptaA	ackA	TRUE	0.639	66.000	0.185	1.000		NA
3749815	3749816	CMM_0896	CMM_0897	ackA		FALSE	0.016	288.000	0.000	1.000		NA
3749816	3749817	CMM_0897	CMM_0898			FALSE	0.035	168.000	0.000	NA		NA
3749817	3749818	CMM_0898	CMM_0899			TRUE	0.981	-3.000	0.600	NA		NA
3749818	3749819	CMM_0899	CMM_0900			FALSE	0.191	46.000	0.000	1.000		NA
3749819	3749820	CMM_0900	CMM_0901		recR	TRUE	0.953	7.000	0.028	0.008	Y	NA
3749820	3749821	CMM_0901	CMM_0902	recR	lysC	FALSE	0.264	110.000	0.010	1.000	N	NA
3749821	3749822	CMM_0902	CMM_0903	lysC	asdA	TRUE	0.824	50.000	0.119	1.000	Y	NA
3749822	3749823	CMM_0903	CMM_0904	asdA	mqoA	FALSE	0.152	88.000	0.003	1.000		NA
3749823	3749824	CMM_0904	CMM_0905	mqoA		FALSE	0.200	70.000	0.006	1.000		NA
3749824	3749825	CMM_0905	CMM_0906			FALSE	0.269	71.000	0.000	1.000	N	NA
3749825	3749826	CMM_0906	CMM_0907		tdkA	TRUE	0.813	1.000	0.000	1.000	N	NA
3749826	3749827	CMM_0907	CMM_0908	tdkA		FALSE	0.025	356.000	0.000	1.000	N	NA
3749827	3749828	CMM_0908	CMM_0909			FALSE	0.009	339.000	0.000	NA		NA
3749828	3749829	CMM_0909	CMM_0910			TRUE	0.589	-3.000	0.000	NA		NA
3749829	3749830	CMM_0910	CMM_0911			FALSE	0.097	88.000	0.000	NA		NA
3749830	3749831	CMM_0911	CMM_0912			FALSE	0.013	273.000	0.000	NA		NA
3749833	3749834	CMM_0914	CMM_0915		pbpC	FALSE	0.224	93.000	0.000	1.000	N	NA
3749834	3749835	CMM_0915	CMM_0916	pbpC		FALSE	0.134	146.000	0.000	1.000	N	NA
3749835	3749836	CMM_0916	CMM_0917			TRUE	0.589	-3.000	0.000	NA		NA
3749837	3749838	CMM_tRNA_0011	CMM_0918			FALSE	0.116	64.000	0.000	NA		NA
3749838	3749839	CMM_0918	CMM_0919		pbpD	TRUE	0.710	0.000	0.000	1.000		NA
3749840	3749841	CMM_0920	CMM_0921			TRUE	0.927	0.000	0.094	NA		NA
3749843	3749844	CMM_0923	CMM_0924			TRUE	0.674	-3.000	0.000	1.000		NA
3749844	3749845	CMM_0924	CMM_0925			FALSE	0.071	126.000	0.000	NA		NA
3749845	3749846	CMM_0925	CMM_0925A			TRUE	0.589	-3.000	0.000	NA		NA
3749846	3749847	CMM_0925A	CMM_0926			FALSE	0.534	-10.000	0.000	NA		NA
3749847	3749848	CMM_0926	CMM_0927		topA	FALSE	0.009	342.000	0.000	NA		NA
3749848	3749849	CMM_0927	CMM_0928	topA	tmkA	TRUE	0.863	-3.000	0.015	1.000	N	NA
3749849	3749850	CMM_0928	CMM_0929	tmkA	holB	TRUE	0.901	-3.000	0.037	1.000	N	NA
3749850	3749851	CMM_0929	CMM_0930	holB		TRUE	0.589	-3.000	0.000	NA		NA
3749851	3749852	CMM_0930	CMM_tRNA_0012			FALSE	0.075	121.000	0.000	NA		NA
3749852	3749853	CMM_tRNA_0012	CMM_0931		pbpE	FALSE	0.012	282.000	0.000	NA		NA
3749853	3749854	CMM_0931	CMM_0932	pbpE	pncA	FALSE	0.271	65.000	0.000	1.000	N	NA
3749854	3749855	CMM_0932	CMM_0933	pncA	gabD	FALSE	0.407	78.000	0.000	0.076	N	NA
3749855	3749856	CMM_0933	CMM_0934	gabD		TRUE	0.829	0.000	0.000	1.000	N	NA
3749856	3749857	CMM_0934	CMM_0935			FALSE	0.115	67.000	0.000	NA		NA
3749857	3749858	CMM_0935	CMM_0936			FALSE	0.063	134.000	0.000	NA		NA
3749860	3749861	CMM_0938	CMM_0939			TRUE	0.989	-3.000	0.313	1.000	Y	NA
3749861	3749862	CMM_0939	CMM_0940			TRUE	0.978	-3.000	0.255	0.007		NA
3749864	3749865	CMM_0942	CMM_0943			FALSE	0.440	6.000	0.000	NA		NA
3749865	3749866	CMM_0943	CMM_0944			FALSE	0.017	227.000	0.000	NA		NA
3749866	3749867	CMM_0944	CMM_0945			TRUE	0.994	4.000	0.660	0.070	Y	NA
3749867	3749868	CMM_0945	CMM_0946			TRUE	0.968	12.000	0.240	0.070	Y	NA
3749868	3749869	CMM_0946	CMM_0947			TRUE	0.887	33.000	0.143	1.000	Y	NA
3749869	3749870	CMM_0947	CMM_0948			FALSE	0.213	109.000	0.000	1.000	N	NA
3749871	3749872	CMM_0949	CMM_0950			TRUE	0.629	0.000	0.000	NA		NA
3749874	3749875	CMM_0952	CMM_0953			FALSE	0.390	106.000	0.015	0.018		NA
3749877	3749878	CMM_0955	CMM_0956			TRUE	0.994	0.000	0.353	0.069	Y	NA
3749878	3749879	CMM_0956	CMM_0957			TRUE	0.960	-10.000	0.137	0.069	N	NA
3749879	3749880	CMM_0957	CMM_0958			TRUE	0.976	-3.000	0.095	1.000	Y	NA
3749880	3749881	CMM_0958	CMM_0959			TRUE	0.963	-3.000	0.000	0.029	Y	NA
3749881	3749882	CMM_0959	CMM_0960		ribH	FALSE	0.219	102.000	0.000	1.000	N	NA
3749882	3749883	CMM_0960	CMM_0961	ribH	ribAB	TRUE	0.972	-3.000	0.011	0.002	Y	NA
3749883	3749884	CMM_0961	CMM_0962	ribAB	ribC	TRUE	0.951	-3.000	0.016	1.000	Y	NA
3749884	3749885	CMM_0962	CMM_0963	ribC	ribD	TRUE	0.993	0.000	0.456	1.000	Y	NA
3749885	3749886	CMM_0963	RFN	ribD		FALSE	0.114	72.000	0.000	NA		NA
3749886	3749887	RFN	CMM_0964			FALSE	0.115	65.000	0.000	NA		NA
3749887	3749888	CMM_0964	CMM_0965		trpS	TRUE	0.674	-3.000	0.000	1.000		NA
3749888	3749889	CMM_0965	CMM_0966	trpS	xthA	FALSE	0.378	83.000	0.026	1.000	N	NA
3749889	3749890	CMM_0966	CMM_0967	xthA		FALSE	0.409	11.000	0.000	1.000		NA
3749892	3749893	CMM_0969	CMM_0970	sdhB	sdhA	TRUE	0.963	58.000	0.604	0.002	Y	NA
3749893	3749894	CMM_0970	CMM_0971	sdhA	sdhD	TRUE	0.982	33.000	0.705	0.002	Y	NA
3749894	3749895	CMM_0971	CMM_0972	sdhD	sdhC	TRUE	0.988	3.000	0.157	0.001	Y	NA
3749895	3749896	CMM_0972	CMM_0973	sdhC		FALSE	0.142	141.000	0.000	1.000	N	NA
3749897	3749898	CMM_0974	CMM_0975	manC		FALSE	0.155	75.000	0.000	1.000		NA
3749898	3749899	CMM_0975	CMM_0976			FALSE	0.233	151.000	0.000	0.001		NA
3749899	3749900	CMM_0976	CMM_0977			TRUE	0.837	82.000	0.647	1.000		NA
3749900	3749901	CMM_0977	CMM_0978			TRUE	0.913	-3.000	0.078	1.000		NA
3749901	3749902	CMM_0978	CMM_0979			TRUE	0.943	-3.000	0.078	0.086		NA
3749902	3749903	CMM_0979	CMM_0980		cddA	TRUE	0.929	6.000	0.230	1.000		NA
3749903	3749904	CMM_0980	CMM_0981	cddA	deoA	TRUE	0.985	-3.000	0.221	1.000	Y	NA
3749906	3749907	CMM_0983	CMM_0984	addA		FALSE	0.350	69.000	0.013	1.000	N	NA
3749907	3749908	CMM_0984	CMM_0985			TRUE	0.990	-3.000	0.182	0.003	Y	NA
3749909	3749910	CMM_0986	CMM_0987			TRUE	0.589	-3.000	0.000	NA		NA
3749910	3749911	CMM_0987	CMM_0988		manB	FALSE	0.235	88.000	0.000	1.000	N	NA
3749911	3749912	CMM_0988	CMM_0989	manB	punA	TRUE	0.969	-3.000	0.235	1.000	N	NA
3749917	3749918	CMM_0994	CMM_0995			FALSE	0.186	100.000	0.000	NA	N	NA
3749918	3749919	CMM_0995	CMM_0996			TRUE	0.983	-10.000	0.273	NA	Y	NA
3749919	3749920	CMM_0996	CMM_0997			TRUE	0.974	-3.000	0.429	NA		NA
3749921	3749922	CMM_0998	CMM_0999		accD	TRUE	0.589	-3.000	0.000	NA		NA
3749923	3749924	CMM_1000	CMM_1001			FALSE	0.505	4.000	0.000	NA		NA
3749926	3749927	CMM_1003	CMM_1004	purK	purE	TRUE	0.899	55.000	0.141	0.001	Y	NA
3749927	3749928	CMM_1004	CMM_1005	purE		TRUE	0.807	-3.000	0.007	NA	N	NA
3749929	3749930	CMM_1006	CMM_1007	wcqB	wzt	TRUE	0.626	47.000	0.000	1.000	Y	NA
3749930	3749931	CMM_1007	CMM_1008	wzt	wzm	TRUE	0.991	-16.000	0.548	1.000	Y	NA
3749931	3749932	CMM_1008	CMM_1009	wzm	rmlD	FALSE	0.511	95.000	0.000	1.000	Y	NA
3749932	3749933	CMM_1009	CMM_1010	rmlD	rmlB	TRUE	0.985	-3.000	0.083	0.007	Y	NA
3749934	3749935	CMM_1011	CMM_1012	wcqC	rmlC	FALSE	0.288	26.000	0.000	1.000		NA
3749935	3749936	CMM_1012	CMM_1013	rmlC	rmlA	TRUE	0.978	4.000	0.200	1.000	Y	NA
3749937	3749938	CMM_1014	CMM_1015	wcqD	wcqE	TRUE	0.955	-3.000	0.030	NA	Y	NA
3749938	3749939	CMM_1015	CMM_1016	wcqE	wcqF	TRUE	0.930	-3.000	0.000	NA	Y	NA
3749940	3749941	CMM_1017	CMM_1018	wcqG	wcqH	TRUE	0.589	-3.000	0.000	NA		NA
3749941	3749942	CMM_1018	CMM_1019	wcqH	wcqI	FALSE	0.098	192.000	0.053	NA		NA
3749942	3749943	CMM_1019	CMM_1020	wcqI	glfA	FALSE	0.193	68.000	0.012	NA		NA
3749943	3749944	CMM_1020	CMM_1021	glfA	wcqJ	TRUE	0.932	0.000	0.105	NA		NA
3749944	3749945	CMM_1021	CMM_1022	wcqJ	wcqK	FALSE	0.053	145.000	0.000	NA		NA
3749945	3749946	CMM_1022	CMM_1023	wcqK	wcqL	FALSE	0.040	160.000	0.000	NA		NA
3749947	3749948	CMM_1024	CMM_1025	wcqM	wzy4	TRUE	0.946	49.000	0.667	NA	Y	NA
3749948	3749949	CMM_1025	CMM_1026	wzy4	gcdH	TRUE	0.796	0.000	0.000	NA	N	NA
3749950	3749951	CMM_1027	CMM_1028	manA	galE1	FALSE	0.243	35.000	0.000	1.000		NA
3749951	3749952	CMM_1028	CMM_1029	galE1	whiB1	FALSE	0.069	150.000	0.000	1.000		NA
3749952	3749953	CMM_1029	CMM_1030	whiB1	wcqR	FALSE	0.474	94.000	0.125	NA		NA
3749953	3749954	CMM_1030	CMM_1031	wcqR		TRUE	0.971	5.000	0.606	NA		NA
3749956	3749957	CMM_1033	CMM_1034		manB	TRUE	0.973	3.000	0.460	NA		NA
3749957	3749958	CMM_1034	CMM_1035	manB		FALSE	0.095	90.000	0.000	NA		NA
3749958	3749959	CMM_1035	CMM_1036		copP	FALSE	0.147	44.000	0.000	NA		NA
3749959	3749960	CMM_1036	CMM_1037	copP	copA	TRUE	0.968	2.000	0.000	0.002	Y	NA
3749960	3749961	CMM_1037	CMM_1038	copA	ahcY	FALSE	0.272	63.000	0.000	1.000	N	NA
3749964	3749965	CMM_1041	CMM_1042	bglK		TRUE	0.890	54.000	0.286	1.000	Y	NA
3749967	3749968	CMM_1044	CMM_1045			TRUE	0.937	15.000	0.648	NA		NA
3749968	3749969	CMM_1045	CMM_1046			TRUE	0.965	-3.000	0.302	NA		NA
3749969	3749970	CMM_1046	CMM_1047			TRUE	0.989	-3.000	0.841	NA		NA
3749970	3749971	CMM_1047	CMM_1048			TRUE	0.982	-3.000	0.628	NA		NA
3749972	3749973	CMM_1049	CMM_1050			TRUE	0.993	5.000	0.772	1.000	Y	NA
3749973	3749974	CMM_1050	CMM_1051			TRUE	0.967	-16.000	0.418	NA		NA
3749974	3749975	CMM_1051	CMM_1052			TRUE	0.583	71.000	0.163	NA		NA
3749975	3749976	CMM_1052	CMM_1053			FALSE	0.222	155.000	0.072	NA		NA
3749976	3749977	CMM_1053	CMM_1054		secA	FALSE	0.186	200.000	0.094	NA	N	NA
3749979	3749980	CMM_1056	CMM_1057			FALSE	0.115	70.000	0.000	NA		NA
3749980	3749981	CMM_1057	CMM_1058			FALSE	0.005	702.000	0.000	NA		NA
3749981	3749982	CMM_1058	CMM_1059			TRUE	0.611	10.000	0.000	1.000	N	NA
3749986	3749987	CMM_tRNA_0013	CMM_1063			FALSE	0.013	273.000	0.000	NA		NA
3749987	3749988	CMM_1063	CMM_1064			FALSE	0.073	125.000	0.000	NA		NA
3749988	3749989	CMM_1064	CMM_1065			FALSE	0.050	148.000	0.000	NA		NA
3749989	3749990	CMM_1065	CMM_1066			TRUE	0.589	-3.000	0.000	NA		NA
3749993	3749994	CMM_1069	CMM_1070			TRUE	0.966	-3.000	0.208	1.000	N	NA
3749995	3749996	CMM_1071	CMM_1072			FALSE	0.089	105.000	0.000	NA		NA
3750000	3750001	CMM_1076	CMM_1077		arsB	FALSE	0.020	415.000	0.000	1.000	N	NA
3750001	3750002	CMM_1077	CMM_1078	arsB		FALSE	0.245	83.000	0.000	1.000	N	NA
3750002	3750003	CMM_1078	CMM_1079			FALSE	0.188	47.000	0.000	1.000		NA
3750003	3750004	CMM_1079	CMM_1080			TRUE	0.589	-3.000	0.000	NA		NA
3750004	3750005	CMM_1080	CMM_1081			FALSE	0.561	3.000	0.000	NA		NA
3750006	3750007	CMM_1082	CMM_1083			FALSE	0.030	175.000	0.000	NA		NA
3750008	3750009	CMM_1084	CMM_1085		otsA	FALSE	0.508	101.000	0.000	1.000	Y	NA
3750009	3750010	CMM_1085	CMM_1086	otsA	otsB	TRUE	0.992	6.000	0.471	0.001	Y	NA
3750010	3750011	CMM_1086	CMM_1087	otsB	mnhAB	FALSE	0.267	74.000	0.000	1.000	N	NA
3750011	3750012	CMM_1087	CMM_1088	mnhAB	mnhC	TRUE	0.998	-3.000	0.833	0.001	Y	NA
3750012	3750013	CMM_1088	CMM_1089	mnhC	mnhD	TRUE	0.998	-3.000	0.870	0.001	Y	NA
3750013	3750014	CMM_1089	CMM_1090	mnhD	mnhE	TRUE	0.996	-3.000	0.913	1.000	Y	NA
3750014	3750015	CMM_1090	CMM_1091	mnhE	mnhF	TRUE	0.956	-3.000	0.109	0.058		NA
3750015	3750016	CMM_1091	CMM_1092	mnhF	mnhG	TRUE	0.929	-3.000	0.106	1.000		NA
3750016	3750017	CMM_1092	CMM_1093	mnhG	ilvD	FALSE	0.270	66.000	0.000	1.000	N	NA
3750017	3750018	CMM_1093	CMM_1094	ilvD	ilvB	TRUE	0.975	-3.000	0.020	0.002	Y	NA
3750018	3750019	CMM_1094	CMM_1095	ilvB	ilvH	TRUE	0.995	-3.000	0.380	0.001	Y	NA
3750019	3750020	CMM_1095	CMM_1096	ilvH	ilvC	TRUE	0.605	169.000	0.071	0.002	Y	NA
3750020	3750021	CMM_1096	CMM_1097	ilvC		FALSE	0.063	134.000	0.000	NA		NA
3750021	3750022	CMM_1097	CMM_1098			TRUE	0.589	-3.000	0.000	NA		NA
3750028	3750029	CMM_1104	CMM_1105	leuB	ilvE	TRUE	0.941	9.000	0.083	1.000	Y	NA
3750029	3750030	CMM_1105	CMM_1106	ilvE		FALSE	0.344	58.000	0.010	1.000	N	NA
3750030	3750031	CMM_1106	CMM_1107			FALSE	0.561	3.000	0.000	NA		NA
3750031	3750032	CMM_1107	CMM_1108		gltX	FALSE	0.280	14.000	0.000	NA		NA
3750032	3750033	CMM_1108	CMM_1109	gltX	trxB2	TRUE	0.800	-7.000	0.006	1.000	N	NA
3750033	3750034	CMM_1109	CMM_tRNA_0014	trxB2		FALSE	0.089	104.000	0.000	NA		NA
3750034	3750035	CMM_tRNA_0014	CMM_1110			FALSE	0.013	264.000	0.000	NA		NA
3750035	3750036	CMM_1110	CMM_1111			FALSE	0.027	181.000	0.000	NA		NA
3750037	3750038	CMM_1112	CMM_1113			TRUE	0.569	135.000	0.000	0.004	Y	NA
3750038	3750039	CMM_1113	CMM_1114			FALSE	0.158	68.000	0.000	1.000		NA
3750041	3750042	CMM_1116	yybP-ykoY2			FALSE	0.162	40.000	0.000	NA		NA
3750042	3750043	yybP-ykoY2	CMM_1117			FALSE	0.111	77.000	0.000	NA		NA
3750043	3750044	CMM_1117	CMM_1118			FALSE	0.151	43.000	0.000	NA		NA
3750045	3750046	CMM_tRNA_0015	CMM_1119			FALSE	0.084	112.000	0.000	NA		NA
3750046	3750047	CMM_1119	CMM_1120		ungA	FALSE	0.409	11.000	0.000	1.000		NA
3750047	3750048	CMM_1120	CMM_1121	ungA		FALSE	0.431	54.000	0.025	1.000	N	NA
3750049	3750050	CMM_1122	CMM_1123		sgaH	FALSE	0.004	2348.000	0.000	NA		NA
3750050	3750051	CMM_1123	CMM_1124	sgaH		TRUE	0.844	53.000	0.250	0.029	N	NA
3750052	3750053	CMM_1125	CMM_1126			FALSE	0.182	125.000	0.000	1.000	N	NA
3750053	3750054	CMM_1126	CMM_1127			FALSE	0.209	111.000	0.000	1.000	N	NA
3750056	3750057	CMM_1129	CMM_PS_16			FALSE	0.561	3.000	0.000	NA		NA
3750058	3750059	CMM_1130	CMM_1131			TRUE	0.589	-3.000	0.000	NA		NA
3750059	3750060	CMM_1131	CMM_1132			TRUE	0.589	-3.000	0.000	NA		NA
3750060	3750061	CMM_1132	CMM_1133		echA	FALSE	0.285	57.000	0.000	1.000	N	NA
3750061	3750062	CMM_1133	CMM_1134	echA		FALSE	0.460	69.000	0.040	1.000	N	NA
3750062	3750063	CMM_1134	CMM_1135			FALSE	0.123	106.000	0.000	1.000		NA
3750063	3750064	CMM_1135	CMM_1136			FALSE	0.091	95.000	0.000	NA		NA
3750064	3750065	CMM_1136	CMM_1137			FALSE	0.432	85.000	0.083	NA		NA
3750065	3750066	CMM_1137	CMM_1138			FALSE	0.096	89.000	0.000	NA		NA
3750066	3750067	CMM_1138	CMM_1139			FALSE	0.068	129.000	0.000	NA		NA
3750068	3750069	CMM_tRNA_0016	CMM_1140			FALSE	0.006	527.000	0.000	NA		NA
3750069	3750070	CMM_1140	CMM_1141			FALSE	0.119	111.000	0.000	1.000		NA
3750071	3750072	CMM_1142	CMM_1143			TRUE	0.969	-3.000	0.000	0.001	Y	NA
3750072	3750073	CMM_1143	CMM_1144			TRUE	0.803	-3.000	0.000	1.000	N	NA
3750073	3750074	CMM_1144	CMM_1145			TRUE	0.698	35.000	0.000	1.000	Y	NA
3750074	3750075	CMM_1145	CMM_1146			TRUE	0.967	26.000	1.000	1.000	N	NA
3750076	3750077	CMM_1147	CMM_1148			FALSE	0.225	76.000	0.000	NA	N	NA
3750079	3750080	CMM_1150	CMM_1151	argS		FALSE	0.090	112.000	0.002	NA		NA
3750080	3750081	CMM_1151	CMM_1152		lysA	FALSE	0.043	157.000	0.000	NA		NA
3750081	3750082	CMM_1152	CMM_1153	lysA	thrA	TRUE	0.971	-3.000	0.071	1.000	Y	NA
3750082	3750083	CMM_1153	CMM_1154	thrA	thrC	TRUE	0.986	0.000	0.194	1.000	Y	NA
3750083	3750084	CMM_1154	CMM_1155	thrC	thrB	TRUE	0.953	12.000	0.221	1.000	Y	NA
3750084	3750085	CMM_1155	CMM_1156	thrB		FALSE	0.030	297.000	0.000	1.000	N	NA
3750085	3750086	CMM_1156	CMM_1157		prfA	TRUE	0.780	6.000	0.017	1.000	N	NA
3750086	3750087	CMM_1157	CMM_1158	prfA		TRUE	0.870	25.000	0.069	1.000	Y	NA
3750089	3750090	CMM_1160	CMM_1161		rfeA	TRUE	0.967	-3.000	0.248	NA	N	NA
3750090	3750091	CMM_1161	CMM_1162	rfeA		TRUE	0.807	-3.000	0.026	NA		NA
3750091	3750092	CMM_1162	CMM_1163		atpB	FALSE	0.056	155.000	0.004	NA		NA
3750092	3750093	CMM_1163	CMM_1164	atpB	atpE	TRUE	0.863	47.000	0.062	0.003	Y	NA
3750093	3750094	CMM_1164	CMM_1165	atpE	atpF	TRUE	0.941	12.000	0.056	0.003	Y	NA
3750094	3750095	CMM_1165	CMM_1166	atpF	atpH	TRUE	0.986	0.000	0.067	0.003	Y	NA
3750095	3750096	CMM_1166	CMM_1167	atpH	atpA	TRUE	0.978	56.000	0.864	0.003	Y	NA
3750096	3750097	CMM_1167	CMM_1168	atpA	atpG	TRUE	0.979	50.000	0.846	0.003	Y	NA
3750097	3750098	CMM_1168	CMM_1169	atpG	atpD	TRUE	0.981	36.000	0.724	0.003	Y	NA
3750098	3750099	CMM_1169	CMM_1170	atpD	atpC	TRUE	0.998	2.000	0.837	0.003	Y	NA
3750099	3750100	CMM_1170	CMM_1171	atpC		FALSE	0.076	120.000	0.000	NA		NA
3750101	3750102	CMM_1172	CMM_1173	tag	ogtB	TRUE	0.945	-3.000	0.008	1.000	Y	NA
3750102	3750103	CMM_1173	CMM_1174	ogtB		FALSE	0.037	263.000	0.000	1.000	N	NA
3750104	3750105	CMM_1175	CMM_1176			TRUE	0.984	-3.000	0.667	NA		NA
3750107	3750108	CMM_1178	CMM_1179	dapE		TRUE	0.666	-18.000	0.011	NA		NA
3750108	3750109	CMM_1179	CMM_1180			FALSE	0.139	148.000	0.028	NA		NA
3750114	3750115	CMM_1185	CMM_1186			TRUE	0.965	-10.000	0.389	NA		NA
3750115	3750116	CMM_1186	CMM_1187			TRUE	0.842	-16.000	0.056	NA		NA
3750118	3750119	CMM_1189	CMM_1190	pepP2		FALSE	0.134	49.000	0.000	NA		NA
3750123	3750124	CMM_1194	CMM_1195			TRUE	0.739	10.000	0.060	NA		NA
3750125	3750126	CMM_1196	CMM_1197	uvrD1	uvrD2	TRUE	0.995	-3.000	0.493	0.003	Y	NA
3750128	3750129	CMM_1199	CMM_1200		uvrD3	TRUE	0.899	11.000	0.044	1.000	Y	NA
3750130	3750131	CMM_1201	CMM_1202			FALSE	0.054	143.000	0.000	NA		NA
3750132	3750133	CMM_1203	CMM_1204			FALSE	0.235	141.000	0.053	1.000		NA
3750133	3750134	CMM_1204	CMM_tRNA_0017			FALSE	0.042	158.000	0.000	NA		NA
3750135	3750136	CMM_1205	CMM_1206			FALSE	0.077	119.000	0.000	NA		NA
3750136	3750137	CMM_1206	CMM_1207			TRUE	0.938	-3.000	0.160	NA		NA
3750137	3750138	CMM_1207	CMM_1208		lipA	FALSE	0.143	129.000	0.000	NA	N	NA
3750138	3750139	CMM_1208	CMM_1209	lipA	lipB	TRUE	0.994	-3.000	0.319	0.001	Y	NA
3750140	3750141	CMM_1210	CMM_1211			FALSE	0.046	154.000	0.000	NA		NA
3750141	3750142	CMM_1211	CMM_1212			FALSE	0.219	26.000	0.000	NA		NA
3750142	3750143	CMM_1212	CMM_1213			FALSE	0.130	51.000	0.000	NA		NA
3750146	3750147	CMM_1216	CMM_1217			TRUE	0.803	-3.000	0.000	1.000	N	NA
3750150	3750151	CMM_1220	CMM_1221			FALSE	0.054	143.000	0.000	NA		NA
3750152	3750153	CMM_1222	CMM_1223			TRUE	0.589	-3.000	0.000	NA		NA
3750155	3750156	CMM_1225	CMM_1226			FALSE	0.092	93.000	0.000	NA		NA
3750156	3750157	CMM_1226	CMM_1227			FALSE	0.106	80.000	0.000	NA		NA
3750159	3750160	CMM_1229	CMM_1230			FALSE	0.057	139.000	0.000	NA		NA
3750160	3750161	CMM_1230	CMM_1231			FALSE	0.045	155.000	0.000	NA		NA
3750161	3750162	CMM_1231	CMM_1232			TRUE	0.955	-3.000	0.222	NA		NA
3750162	3750163	CMM_1232	CMM_1233			FALSE	0.117	62.000	0.000	NA		NA
3750166	3750167	CMM_1236	CMM_1237			FALSE	0.115	67.000	0.000	NA		NA
3750169	3750170	CMM_1239	CMM_1240			TRUE	0.991	-3.000	0.400	1.000	Y	NA
3750170	3750171	CMM_1240	CMM_1241			TRUE	0.971	4.000	0.375	1.000	N	NA
3750171	3750172	CMM_1241	CMM_1242			TRUE	0.964	-3.000	0.000	0.018	Y	NA
3750172	3750173	CMM_1242	CMM_1243			FALSE	0.024	301.000	0.000	NA	N	NA
3750173	3750174	CMM_1243	CMM_1244			FALSE	0.425	124.000	0.000	NA	Y	NA
3750174	3750175	CMM_1244	CMM_1245			TRUE	0.937	-3.000	0.000	1.000	Y	NA
3750175	3750176	CMM_1245	CMM_1246			FALSE	0.075	121.000	0.000	NA		NA
3750177	3750178	CMM_1247	CMM_1248	sipX		FALSE	0.213	27.000	0.000	NA		NA
3750178	3750179	CMM_1248	CMM_1249			TRUE	0.589	-3.000	0.000	NA		NA
3750179	3750180	CMM_1249	CMM_1250			FALSE	0.091	97.000	0.000	NA		NA
3750181	3750182	CMM_1251	CMM_1252			FALSE	0.256	137.000	0.000	0.083	N	NA
3750182	3750183	CMM_1252	CMM_1253			FALSE	0.169	130.000	0.000	1.000	N	NA
3750183	3750184	CMM_1253	CMM_1254			FALSE	0.124	56.000	0.000	NA		NA
3750185	3750186	CMM_1255	CMM_1256			FALSE	0.041	318.000	0.000	0.055		NA
3750186	3750187	CMM_1256	CMM_1257			FALSE	0.132	50.000	0.000	NA		NA
3750189	3750190	CMM_1259	CMM_1260			FALSE	0.463	120.000	0.000	1.000	Y	NA
3750190	3750191	CMM_1260	CMM_1261			TRUE	0.997	3.000	0.818	0.066	Y	NA
3750191	3750192	CMM_1261	CMM_1262			TRUE	0.997	3.000	0.857	0.066	Y	NA
3750192	3750193	CMM_1262	CMM_1263			FALSE	0.504	178.000	0.143	1.000	Y	NA
3750194	3750195	CMM_1264	CMM_1265			TRUE	0.589	-3.000	0.000	NA		NA
3750196	3750197	CMM_1266	CMM_1267			FALSE	0.194	32.000	0.000	NA		NA
3750197	3750198	CMM_1267	CMM_1268			TRUE	0.589	-3.000	0.000	NA		NA
3750198	3750199	CMM_1268	CMM_1269			FALSE	0.081	114.000	0.000	NA		NA
3750199	3750200	CMM_1269	CMM_1270		clpS	TRUE	0.989	-3.000	0.823	NA		NA
3750200	3750201	CMM_1270	CMM_1271	clpS		FALSE	0.096	89.000	0.000	NA		NA
3750201	3750202	CMM_1271	CMM_1272			TRUE	0.964	-3.000	0.000	0.018	Y	NA
3750202	3750203	CMM_1272	CMM_1273			FALSE	0.091	96.000	0.000	NA		NA
3750203	3750204	CMM_1273	CMM_1274			TRUE	0.589	-3.000	0.000	NA		NA
3750204	3750205	CMM_1274	CMM_1275			FALSE	0.167	131.000	0.000	1.000	N	NA
3750206	3750207	CMM_1276	CMM_1277			FALSE	0.013	264.000	0.000	NA		NA
3750207	3750208	CMM_1277	CMM_1278			FALSE	0.017	225.000	0.000	NA		NA
3750208	3750209	CMM_1278	CMM_1279			FALSE	0.170	151.000	0.020	NA	N	NA
3750209	3750210	CMM_1279	CMM_1280			TRUE	0.776	-3.000	0.020	NA		NA
3750210	3750211	CMM_1280	CMM_1281			TRUE	0.981	-3.000	0.600	NA		NA
3750211	3750212	CMM_1281	CMM_1282			FALSE	0.091	98.000	0.000	NA		NA
3750215	3750216	CMM_1285	CMM_1286			TRUE	0.642	85.000	0.250	NA		NA
3750216	3750217	CMM_1286	CMM_1287		tagG	TRUE	0.993	0.000	0.462	1.000	Y	NA
3750217	3750218	CMM_1287	CMM_1288	tagG		TRUE	0.660	37.000	0.000	NA	Y	NA
3750219	3750220	CMM_1289	CMM_1290			TRUE	0.973	-24.000	0.508	NA		NA
3750220	3750221	CMM_1290	CMM_1291			FALSE	0.423	54.000	0.059	NA		NA
3750223	3750224	CMM_1293	CMM_1294		murI	FALSE	0.165	59.000	0.000	1.000		NA
3750224	3750225	CMM_1294	CMM_1295	murI	rph	TRUE	0.816	9.000	0.048	1.000	N	NA
3750225	3750226	CMM_1295	CMM_1296	rph		TRUE	0.910	12.000	0.262	1.000	N	NA
3750226	3750227	CMM_1296	CMM_1297		czcD	FALSE	0.228	91.000	0.000	1.000	N	NA
3750228	3750229	CMM_1298	CMM_tRNA_0018			FALSE	0.054	142.000	0.000	NA		NA
3750230	3750231	CMM_1299	CMM_1300			FALSE	0.269	72.000	0.000	1.000	N	NA
3750231	3750232	CMM_1300	CMM_1301			TRUE	0.994	-3.000	0.667	1.000	Y	NA
3750232	3750233	CMM_1301	CMM_1302			TRUE	0.997	-3.000	0.667	0.003	Y	NA
3750233	3750234	CMM_1302	CMM_1303			TRUE	0.887	51.000	0.758	NA		NA
3750234	3750235	CMM_1303	CMM_1304			TRUE	0.955	0.000	0.185	NA		NA
3750235	3750236	CMM_1304	CMM_1305			TRUE	0.909	-25.000	0.125	NA		NA
3750236	3750237	CMM_1305	CMM_1306			TRUE	0.927	-3.000	0.125	NA		NA
3750239	3750240	CMM_1308	CMM_1309	prfB	ftsE	FALSE	0.489	76.000	0.053	1.000	N	NA
3750240	3750241	CMM_1309	CMM_1310	ftsE	ftsX	TRUE	0.991	-3.000	0.431	1.000	Y	NA
3750241	3750242	CMM_1310	CMM_1311	ftsX	smpB	FALSE	0.454	67.000	0.038	1.000	N	NA
3750242	3750243	CMM_1311	CMM_rRNA_0001	smpB		FALSE	0.054	142.000	0.000	NA		NA
3750244	3750245	CMM_1312	CMM_1313			TRUE	0.988	3.000	0.545	0.066	N	NA
3750245	3750246	CMM_1313	CMM_1314			TRUE	0.984	0.000	0.273	0.066	N	NA
3750248	3750249	CMM_1316	CMM_1317			TRUE	0.657	11.000	0.033	1.000		NA
3750249	3750250	CMM_1317	CMM_1318		aroA	TRUE	0.899	-3.000	0.063	1.000		NA
3750251	3750252	CMM_1319	CMM_1320	sigH	rsrA	TRUE	0.589	-3.000	0.000	NA		NA
3750252	3750253	CMM_1320	CMM_1321	rsrA		FALSE	0.176	36.000	0.000	NA		NA
3750255	3750256	CMM_1323	CMM_1324	guaB3		FALSE	0.246	114.000	0.000	0.072		NA
3750256	3750257	CMM_1324	CMM_1325			TRUE	0.993	-7.000	1.000	0.044		NA
3750261	3750262	CMM_1329	CMM_1330			FALSE	0.112	76.000	0.000	NA		NA
3750263	3750264	CMM_1331	CMM_1332			TRUE	0.953	28.000	1.000	NA		NA
3750264	3750265	CMM_1332	CMM_1333			TRUE	0.589	-3.000	0.000	NA		NA
3750265	3750266	CMM_1333	CMM_1334			FALSE	0.032	171.000	0.000	NA		NA
3750266	3750267	CMM_1334	CMM_1335		metX	FALSE	0.191	120.000	0.000	1.000	N	NA
3750267	3750268	CMM_1335	CMM_1336	metX	metY	TRUE	0.915	84.000	0.542	1.000	Y	NA
3750271	3750272	CMM_1339	CMM_1340			TRUE	0.803	-3.000	0.000	1.000	N	NA
3750272	3750273	CMM_1340	CMM_1341		leuC	FALSE	0.258	78.000	0.000	1.000	N	NA
3750273	3750274	CMM_1341	CMM_1342	leuC	leuD	TRUE	0.995	3.000	0.477	0.001	Y	NA
3750274	3750275	CMM_1342	CMM_1343	leuD	murA	TRUE	0.633	43.000	0.074	1.000	N	NA
3750275	3750276	CMM_1343	CMM_1344	murA		TRUE	0.637	124.000	0.236	1.000	N	NA
3750276	3750277	CMM_1344	CMM_1345		gpsA	TRUE	0.956	8.000	0.380	1.000	N	NA
3750277	3750278	CMM_1345	CMM_1346	gpsA	ddlC	TRUE	0.934	3.000	0.088	1.000	N	NA
3750278	3750279	CMM_1346	CMM_1347	ddlC		FALSE	0.478	103.000	0.000	NA	Y	NA
3750283	3750284	CMM_1351	CMM_1352			TRUE	0.950	26.000	0.867	NA		NA
3750284	3750285	CMM_1352	CMM_1353			TRUE	0.989	-3.000	0.837	NA		NA
3750285	3750286	CMM_1353	CMM_1354		recG	TRUE	0.589	-3.000	0.000	NA		NA
3750286	3750287	CMM_1354	CMM_1355	recG	coaD	FALSE	0.541	27.000	0.015	1.000	N	NA
3750287	3750288	CMM_1355	CMM_1356	coaD		FALSE	0.287	20.000	0.004	NA		NA
3750288	3750289	CMM_1356	CMM_1357		rpmF	TRUE	0.979	3.000	0.599	NA		NA
3750289	3750290	CMM_1357	CMM_1358	rpmF	rnc	TRUE	0.570	26.000	0.044	1.000		NA
3750290	3750291	CMM_1358	CMM_1359	rnc	fpgA	TRUE	0.868	7.000	0.068	1.000	N	NA
3750293	3750294	CMM_1361	CMM_1362	smcA	ftsY	TRUE	0.900	21.000	0.165	0.012	N	NA
3750294	3750295	CMM_1362	CMM_1363	ftsY	ffhA	TRUE	0.796	63.000	0.024	0.001	Y	NA
3750295	3750296	CMM_1363	CMM_1364	ffhA		FALSE	0.053	145.000	0.000	NA		NA
3750297	3750298	CMM_1365	CMM_1366			FALSE	0.360	14.000	0.000	1.000		NA
3750299	3750300	CMM_1367	CMM_1368	rpsP		TRUE	0.964	4.000	0.385	1.000		NA
3750300	3750301	CMM_1368	CMM_1369		rimM	TRUE	0.842	32.000	0.324	1.000		NA
3750301	3750302	CMM_1369	CMM_1370	rimM	trmD	TRUE	0.995	2.000	0.672	1.000	Y	NA
3750304	3750305	CMM_1372	CMM_1373		rplS	FALSE	0.032	171.000	0.000	NA		NA
3750305	3750306	CMM_1373	CMM_1374	rplS	lepB	FALSE	0.270	67.000	0.000	1.000	N	NA
3750306	3750307	CMM_1374	CMM_1375	lepB	rnhB	TRUE	0.829	0.000	0.000	1.000	N	NA
3750307	3750308	CMM_1375	CMM_1376	rnhB		FALSE	0.414	74.000	0.067	NA		NA
3750308	3750309	CMM_1376	CMM_1377			FALSE	0.163	112.000	0.015	NA		NA
3750309	3750310	CMM_1377	CMM_1378			TRUE	0.829	0.000	0.000	1.000	N	NA
3750310	3750311	CMM_1378	CMM_1379			FALSE	0.069	195.000	0.003	1.000	N	NA
3750311	3750312	CMM_1379	CMM_1380		xerC	FALSE	0.353	174.000	0.037	1.000	Y	NA
3750314	3750315	CMM_1382	CMM_1383		rpsB	FALSE	0.044	239.000	0.000	1.000	N	NA
3750315	3750316	CMM_1383	CMM_1384	rpsB	tsf	TRUE	0.931	110.000	0.748	1.000	Y	NA
3750316	3750317	CMM_1384	CMM_1385	tsf	pyrH	TRUE	0.616	157.000	0.416	1.000	N	NA
3750317	3750318	CMM_1385	CMM_1386	pyrH	frrA	TRUE	0.824	114.000	0.626	1.000	N	NA
3750318	3750319	CMM_1386	CMM_1387	frrA	cdsA	TRUE	0.937	1.000	0.076	1.000	N	NA
3750319	3750320	CMM_1387	CMM_1388	cdsA		TRUE	0.777	11.000	0.090	NA		NA
3750320	3750321	CMM_1388	CMM_1389			FALSE	0.429	104.000	0.095	NA		NA
3750321	3750322	CMM_1389	CMM_1390			FALSE	0.115	71.000	0.000	NA		NA
3750322	3750323	CMM_1390	CMM_1391			FALSE	0.176	36.000	0.000	NA		NA
3750323	3750324	CMM_1391	CMM_1392			TRUE	0.914	-3.000	0.092	NA		NA
3750325	3750326	CMM_1393	CMM_1394			TRUE	0.615	30.000	0.077	NA		NA
3750327	3750328	CMM_1395	CMM_1396			TRUE	0.764	-3.000	0.017	NA		NA
3750329	3750330	CMM_1397	CMM_1398	glgB		TRUE	0.979	6.000	0.159	0.012	Y	NA
3750332	3750333	CMM_1400	CMM_1401		glgX	FALSE	0.061	157.000	0.000	1.000		NA
3750334	3750335	CMM_1402	CMM_1403	csdA	trmU	TRUE	0.943	-3.000	0.094	1.000	N	NA
3750335	3750336	CMM_1403	CMM_1404	trmU	ligA	TRUE	0.688	8.000	0.005	1.000	N	NA
3750336	3750337	CMM_1404	CMM_1405	ligA		FALSE	0.082	113.000	0.000	NA		NA
3750339	3750340	CMM_1407	CMM_1408	gatC	gatA	TRUE	0.992	8.000	0.643	0.002	Y	NA
3750340	3750341	CMM_1408	CMM_1409	gatA	gatB	TRUE	0.996	0.000	0.492	0.002	Y	NA
3750341	3750342	CMM_1409	CMM_1410	gatB		TRUE	0.674	-3.000	0.000	1.000		NA
3750344	3750345	CMM_1412	CMM_1413			FALSE	0.528	127.000	0.222	NA		NA
3750346	3750347	CMM_1414	CMM_1415			FALSE	0.091	97.000	0.000	NA		NA
3750347	3750348	CMM_1415	CMM_1416			FALSE	0.113	74.000	0.000	NA		NA
3750348	3750349	CMM_1416	CMM_1417			TRUE	0.698	10.000	0.000	0.054		NA
3750349	3750350	CMM_1417	CMM_1418			FALSE	0.271	98.000	0.000	0.071		NA
3750350	3750351	CMM_1418	CMM_1419			FALSE	0.327	65.000	0.000	0.071		NA
3750354	3750355	CMM_1422	CMM_1423			FALSE	0.165	59.000	0.000	1.000		NA
3750355	3750356	CMM_1423	CMM_1424			TRUE	0.979	-3.000	0.288	0.033		NA
3750356	3750357	CMM_1424	CMM_1425			FALSE	0.115	65.000	0.000	NA		NA
3750357	3750358	CMM_1425	CMM_1426			FALSE	0.079	116.000	0.000	NA		NA
3750358	3750359	CMM_1426	CMM_1427		dinB	FALSE	0.102	83.000	0.000	NA		NA
3750359	3750360	CMM_1427	CMM_1428	dinB		FALSE	0.302	12.000	0.000	NA		NA
3750361	3750362	CMM_1429	CMM_1430	udgA	treZ	FALSE	0.089	170.000	0.000	1.000	N	NA
3750362	3750363	CMM_1430	CMM_1431	treZ	treY	TRUE	0.992	-3.000	0.263	0.012	Y	NA
3750363	3750364	CMM_1431	CMM_1432	treY	treX	TRUE	0.976	-3.000	0.031	0.012	Y	NA
3750365	3750366	CMM_1433	THI			FALSE	0.066	131.000	0.000	NA		NA
3750366	3750367	THI	CMM_1434			FALSE	0.188	33.000	0.000	NA		NA
3750367	3750368	CMM_1434	CMM_1435			TRUE	0.963	3.000	0.326	NA		NA
3750368	3750369	CMM_1435	CMM_1436			TRUE	0.973	-3.000	0.372	1.000		NA
3750369	3750370	CMM_1436	CMM_1437			TRUE	0.624	-10.000	0.000	1.000		NA
3750370	3750371	CMM_1437	CMM_1438			FALSE	0.356	10.000	0.000	NA		NA
3750372	3750373	CMM_1439	CMM_tRNA_0019			FALSE	0.065	132.000	0.000	NA		NA
3750373	3750374	CMM_tRNA_0019	CMM_1440		ornA	FALSE	0.144	45.000	0.000	NA		NA
3750375	3750376	CMM_1441	CMM_1442			FALSE	0.126	54.000	0.000	NA		NA
3750376	3750377	CMM_1442	CMM_tRNA_0020			FALSE	0.268	15.000	0.000	NA		NA
3750377	3750378	CMM_tRNA_0020	CMM_1443		nadE	FALSE	0.169	38.000	0.000	NA		NA
3750379	3750380	CMM_1444	CMM_1445			FALSE	0.104	82.000	0.000	NA		NA
3750381	3750382	CMM_1446	CMM_1447	msrA		FALSE	0.090	100.000	0.000	NA		NA
3750382	3750383	CMM_1447	CMM_1448			FALSE	0.115	66.000	0.000	NA		NA
3750383	3750384	CMM_1448	CMM_1449			TRUE	0.589	-3.000	0.000	NA		NA
3750384	3750385	CMM_1449	CMM_1450			TRUE	0.589	-3.000	0.000	NA		NA
3750385	3750386	CMM_1450	CMM_1451			FALSE	0.154	64.000	0.005	NA		NA
3750386	3750387	CMM_1451	CMM_1452			TRUE	0.742	5.000	0.031	NA		NA
3750390	3750391	CMM_1455	CMM_1456	glbO		TRUE	0.929	0.000	0.083	1.000		NA
3750391	3750392	CMM_1456	CMM_1457		pepN	FALSE	0.273	163.000	0.071	1.000	N	NA
3750393	3750394	CMM_1458	CMM_1459		rpiA	FALSE	0.535	117.000	0.182	1.000		NA
3750394	3750395	CMM_1459	CMM_1460	rpiA	mutM	TRUE	0.960	7.000	0.398	1.000	N	NA
3750396	3750397	CMM_1461	CMM_1462	dpsA		FALSE	0.047	153.000	0.000	NA		NA
3750397	3750398	CMM_1462	CMM_tRNA_0021			FALSE	0.036	165.000	0.000	NA		NA
3750399	3750400	CMM_tRNA_0022	CMM_1463		tig	FALSE	0.115	66.000	0.000	NA		NA
3750400	3750401	CMM_1463	CMM_1464	tig	clpP1	FALSE	0.211	199.000	0.007	1.000	Y	NA
3750401	3750402	CMM_1464	CMM_1465	clpP1	clpP2	TRUE	0.972	37.000	0.512	0.001	Y	NA
3750407	3750408	CMM_1470	CMM_1471			TRUE	0.992	0.000	1.000	NA		NA
3750408	3750409	CMM_1471	CMM_1472		valS	TRUE	0.674	-3.000	0.000	1.000		NA
3750409	3750410	CMM_1472	CMM_1473	valS	pckA	FALSE	0.155	136.000	0.000	1.000	N	NA
3750412	3750413	CMM_1475	CMM_1476			TRUE	0.936	-3.000	0.133	1.000		NA
3750413	3750414	CMM_1476	CMM_1477			TRUE	0.995	-3.000	0.533	0.065	Y	NA
3750414	3750415	CMM_1477	CMM_1478			TRUE	0.997	-3.000	0.889	0.065	Y	NA
3750416	3750417	CMM_1479	CMM_1480		expA	FALSE	0.178	110.000	0.000	NA	N	NA
3750417	3750418	CMM_1480	CMM_1481	expA		FALSE	0.111	77.000	0.000	NA		NA
3750418	3750419	CMM_1481	CMM_1482		ileS	FALSE	0.022	247.000	0.000	1.000		NA
3750419	3750420	CMM_1482	CMM_1483	ileS	folC	TRUE	0.893	-3.000	0.031	1.000	N	NA
3750420	3750421	CMM_1483	CMM_1484	folC		TRUE	0.937	-3.000	0.156	NA		NA
3750421	3750422	CMM_1484	CMM_1485		ndkA	TRUE	0.600	10.000	0.024	NA		NA
3750426	3750427	CMM_1489	CMM_1490	rplU	rpmA	TRUE	0.983	25.000	0.667	0.017	Y	NA
3750427	3750428	CMM_1490	CMM_1491	rpmA	obgE	TRUE	0.662	120.000	0.335	1.000		NA
3750428	3750429	CMM_1491	CMM_1492	obgE	proB	TRUE	0.939	4.000	0.206	1.000		NA
3750429	3750430	CMM_1492	CMM_1493	proB	proA	TRUE	0.938	48.000	0.281	0.002	Y	NA
3750430	3750431	CMM_1493	CMM_1494	proA		FALSE	0.101	101.000	0.002	NA		NA
3750431	3750432	CMM_1494	CMM_1495		nadD	FALSE	0.280	18.000	0.002	NA		NA
3750432	3750433	CMM_1495	CMM_1496	nadD		TRUE	0.621	-3.000	0.002	NA		NA
3750433	3750434	CMM_1496	CMM_1497			FALSE	0.178	40.000	0.002	NA		NA
3750434	3750435	CMM_1497	CMM_1498			FALSE	0.213	32.000	0.002	NA		NA
3750435	3750436	CMM_1498	CMM_tRNA_0023			FALSE	0.090	102.000	0.000	NA		NA
3750438	3750439	CMM_1500	CMM_1501			FALSE	0.155	42.000	0.000	NA		NA
3750439	3750440	CMM_1501	CMM_1502			FALSE	0.084	137.000	0.000	1.000		NA
3750440	3750441	CMM_1502	CMM_1503		fruK	TRUE	0.990	-3.000	0.353	1.000	Y	NA
3750441	3750442	CMM_1503	CMM_1504	fruK	fruA	TRUE	0.929	23.000	0.200	1.000	Y	NA
3750442	3750443	CMM_1504	CMM_1505	fruA	fruB	TRUE	0.742	56.000	0.000	0.003	Y	NA
3750444	3750445	CMM_1506	CMM_1506A			FALSE	0.104	82.000	0.000	NA		NA
3750446	3750447	CMM_1507	CMM_1508			TRUE	0.803	-3.000	0.000	1.000	N	NA
3750449	3750450	CMM_1510	CMM_1511			FALSE	0.115	68.000	0.000	NA		NA
3750450	3750451	CMM_1511	CMM_1512			FALSE	0.194	32.000	0.000	NA		NA
3750454	3750455	CMM_1515	CMM_1516			FALSE	0.167	164.000	0.000	0.006		NA
3750455	3750456	CMM_1516	CMM_1517			TRUE	0.589	-3.000	0.000	NA		NA
3750456	3750457	CMM_1517	CMM_1518		dnaE1	FALSE	0.114	72.000	0.000	NA		NA
3750458	3750459	CMM_1519	CMM_1520	zwfA1		FALSE	0.214	108.000	0.000	1.000	N	NA
3750459	3750460	CMM_1520	CMM_1521			FALSE	0.231	64.000	0.000	NA	N	NA
3750463	3750464	CMM_1524	CMM_1525			FALSE	0.059	137.000	0.000	NA		NA
3750466	3750467	CMM_1527	CMM_1528			TRUE	0.589	-3.000	0.000	NA		NA
3750468	3750469	CMM_1529	CMM_1530	proV	proW	TRUE	0.995	-3.000	0.694	1.000	Y	NA
3750469	3750470	CMM_1530	CMM_1531	proW	proZ	TRUE	0.998	-3.000	0.918	0.064	Y	NA
3750470	3750471	CMM_1531	CMM_1532	proZ	proX	TRUE	0.971	14.000	0.667	0.064	N	NA
3750471	3750472	CMM_1532	CMM_1533	proX		FALSE	0.090	99.000	0.000	NA		NA
3750472	3750473	CMM_1533	CMM_1534		chsA	TRUE	0.589	-3.000	0.000	NA		NA
3750473	3750474	CMM_1534	CMM_1535	chsA		TRUE	0.963	0.000	0.213	1.000		NA
3750474	3750475	CMM_1535	CMM_1536			TRUE	0.936	-3.000	0.133	1.000		NA
3750476	3750477	CMM_1537	CMM_1538			TRUE	0.674	-3.000	0.000	1.000		NA
3750480	3750481	CMM_1541	CMM_1542	cydA	cydB	TRUE	0.998	0.000	0.925	0.032	Y	NA
3750481	3750482	CMM_1542	CMM_1543	cydB	cydD	TRUE	0.958	8.000	0.151	1.000	Y	NA
3750482	3750483	CMM_1543	CMM_1544	cydD	cydC	TRUE	0.996	-3.000	0.631	0.006	Y	NA
3750485	3750486	CMM_1546	CMM_1547	trpE2	leuS	FALSE	0.225	100.000	0.002	1.000	N	NA
3750486	3750487	CMM_1547	CMM_1548	leuS		FALSE	0.026	397.000	0.008	1.000	N	NA
3750487	3750488	CMM_1548	CMM_1549			TRUE	0.928	-3.000	0.130	NA		NA
3750488	3750489	CMM_1549	CMM_1550		holA	FALSE	0.544	86.000	0.163	NA		NA
3750490	3750491	CMM_1551	CMM_1552	rpsT		FALSE	0.155	136.000	0.000	1.000	N	NA
3750492	3750493	CMM_1553	CMM_1554			TRUE	0.674	-3.000	0.000	1.000		NA
3750493	3750494	CMM_1554	CMM_1555		lepA	FALSE	0.115	113.000	0.000	1.000		NA
3750495	3750496	CMM_1556	CMM_1557			FALSE	0.017	227.000	0.000	NA		NA
3750496	3750497	CMM_1557	CMM_1558			FALSE	0.010	314.000	0.000	NA		NA
3750501	3750502	CMM_1562	CMM_1563			FALSE	0.324	11.000	0.000	NA		NA
3750503	3750504	CMM_1564	CMM_1565	hrcA	dnaJ2	FALSE	0.522	61.000	0.059	1.000	N	NA
3750504	3750505	CMM_1565	CMM_1566	dnaJ2		TRUE	0.863	3.000	0.058	NA		NA
3750505	3750506	CMM_1566	CMM_1567			FALSE	0.471	29.000	0.034	NA		NA
3750506	3750507	CMM_1567	CMM_1568			TRUE	0.871	-13.000	0.032	1.000	N	NA
3750507	3750508	CMM_1568	CMM_1569			TRUE	0.976	-3.000	0.457	NA		NA
3750508	3750509	CMM_1569	CMM_1570			TRUE	0.900	9.000	0.222	NA		NA
3750509	3750510	CMM_1570	CMM_1571		era	TRUE	0.905	-7.000	0.089	1.000		NA
3750510	3750511	CMM_1571	CMM_1572	era		FALSE	0.275	112.000	0.000	0.055		NA
3750511	3750512	CMM_1572	CMM_1573			TRUE	0.980	54.000	1.000	0.017	Y	NA
3750512	3750513	CMM_1573	CMM_1574			FALSE	0.099	86.000	0.000	NA		NA
3750513	3750514	CMM_1574	CMM_1575			TRUE	0.589	-3.000	0.000	NA		NA
3750514	3750515	CMM_1575	CMM_1576		leuA	FALSE	0.066	166.000	0.013	NA		NA
3750517	3750518	CMM_1578	CMM_1579	recO	uppS1	TRUE	0.934	-3.000	0.076	1.000	N	NA
3750518	3750519	CMM_1579	CMM_1580	uppS1		FALSE	0.444	10.000	0.000	1.000		NA
3750519	3750520	CMM_1580	CMM_1581		glyS	FALSE	0.119	111.000	0.000	1.000		NA
3750522	3750523	CMM_1583	CMM_1584		dusA	FALSE	0.033	283.000	0.000	1.000	N	NA
3750523	3750524	CMM_1584	CMM_1585	dusA	dgtA	TRUE	0.771	5.000	0.011	1.000	N	NA
3750524	3750525	CMM_1585	CMM_1586	dgtA	dnaG	FALSE	0.387	95.000	0.037	1.000	N	NA
3750525	3750526	CMM_1586	CMM_1587	dnaG		FALSE	0.058	201.000	0.000	1.000	N	NA
3750526	3750527	CMM_1587	CMM_1588			FALSE	0.477	145.000	0.000	0.064	Y	NA
3750527	3750528	CMM_1588	CMM_1589			TRUE	0.994	2.000	0.435	0.064	Y	NA
3750528	3750529	CMM_1589	CMM_1590			TRUE	0.951	-3.000	0.185	1.000		NA
3750529	3750530	CMM_1590	CMM_1591			FALSE	0.286	114.000	0.000	0.027		NA
3750530	3750531	CMM_1591	CMM_1592			FALSE	0.492	111.000	0.000	1.000	Y	NA
3750531	3750532	CMM_1592	CMM_1593			FALSE	0.198	88.000	0.000	NA	N	NA
3750533	3750534	CMM_1594	CMM_tRNA_0024			FALSE	0.109	78.000	0.000	NA		NA
3750534	3750535	CMM_tRNA_0024	CMM_1595		defA	FALSE	0.109	78.000	0.000	NA		NA
3750536	3750537	CMM_1596	CMM_1597	wcmE	wcmF	FALSE	0.279	181.000	0.213	NA		NA
3750537	3750538	CMM_1597	CMM_tRNA_0025	wcmF		FALSE	0.302	12.000	0.000	NA		NA
3750538	3750539	CMM_tRNA_0025	CMM_1598		wcmG	FALSE	0.014	257.000	0.000	NA		NA
3750540	3750541	CMM_1599	CMM_1600	fclA	gmdA	TRUE	0.989	-3.000	0.160	0.006	Y	NA
3750542	3750543	CMM_1601	CMM_1602	wcmH	wcmI	TRUE	0.900	-3.000	0.066	1.000		NA
3750543	3750544	CMM_1602	CMM_1603	wcmI	wcmJ	FALSE	0.089	105.000	0.000	NA		NA
3750544	3750545	CMM_1603	CMM_1604	wcmJ	wcmK	TRUE	0.589	-3.000	0.000	NA		NA
3750545	3750546	CMM_1604	CMM_1605	wcmK	wzy1	TRUE	0.973	-3.000	0.400	NA		NA
3750546	3750547	CMM_1605	CMM_1606	wzy1		TRUE	0.959	-100.000	0.333	NA		NA
3750547	3750548	CMM_1606	CMM_1607		wcmM	TRUE	0.767	-3.000	0.000	NA	N	NA
3750548	3750549	CMM_1607	CMM_1608	wcmM	wzx1	FALSE	0.243	35.000	0.000	1.000		NA
3750550	3750551	CMM_1609	CMM_1610	wcmN		FALSE	0.052	146.000	0.000	NA		NA
3750551	3750552	CMM_1610	CMM_1611		cspA1	FALSE	0.078	118.000	0.000	NA		NA
3750553	3750554	CMM_1612	CMM_1612A	polA2		FALSE	0.094	91.000	0.000	NA		NA
3750554	3750555	CMM_1612A	CMM_1613			FALSE	0.087	108.000	0.000	NA		NA
3750558	3750559	CMM_1616	CMM_1617	fabF	acpP	TRUE	0.824	80.000	0.178	1.000	Y	NA
3750559	3750560	CMM_1617	CMM_1618	acpP	fabH	TRUE	0.938	54.000	0.307	0.002	Y	NA
3750560	3750561	CMM_1618	CMM_1619	fabH	fabD	TRUE	0.935	31.000	0.294	1.000	Y	NA
3750561	3750562	CMM_1619	CMM_1620	fabD		TRUE	0.774	95.000	0.441	NA	N	NA
3750562	3750563	CMM_1620	CMM_1621		aceE	TRUE	0.630	17.000	0.028	NA	N	NA
3750568	3750569	CMM_1625	CMM_1626			TRUE	0.756	15.000	0.117	NA		NA
3750569	3750570	CMM_1626	CMM_1627			TRUE	0.995	-3.000	0.729	1.000	Y	NA
3750570	3750571	CMM_1627	CMM_1628			FALSE	0.099	86.000	0.000	NA		NA
3750571	3750572	CMM_1628	CMM_1629			FALSE	0.128	53.000	0.000	NA		NA
3750572	3750573	CMM_1629	CMM_1630			TRUE	0.748	92.000	0.468	NA		NA
3750573	3750574	CMM_1630	CMM_rRNA_0002			FALSE	0.108	79.000	0.000	NA		NA
3750578	3750579	CMM_1634	CMM_1635	glnA2	glnE	FALSE	0.491	59.000	0.046	1.000	N	NA
3750582	3750583	CMM_1638	CMM_1639			FALSE	0.125	55.000	0.000	NA		NA
3750585	3750586	CMM_1641	CMM_1642	aceF	lpdB	TRUE	0.904	61.000	0.379	1.000	Y	NA
3750586	3750587	CMM_1642	CMM_1643	lpdB	pepA	TRUE	0.664	92.000	0.095	0.036	N	NA
3750588	3750589	CMM_1644	CMM_1645			TRUE	0.574	75.000	0.140	1.000		NA
3750589	3750590	CMM_1645	CMM_1646		sigA	FALSE	0.040	250.000	0.000	1.000	N	NA
3750590	3750591	CMM_1646	CMM_1647	sigA	murX	TRUE	0.814	4.000	0.015	1.000	N	NA
3750591	3750592	CMM_1647	CMM_1648	murX		TRUE	0.989	-3.000	0.796	1.000		NA
3750600	3750601	CMM_1656	CMM_1657	dutA		TRUE	0.903	-3.000	0.078	NA		NA
3750601	3750602	CMM_1657	CMM_1658			TRUE	0.935	3.000	0.169	NA		NA
3750602	3750603	CMM_1658	CMM_1659		acnA	FALSE	0.016	236.000	0.000	NA		NA
3750603	3750604	CMM_1659	CMM_1660	acnA	dxsA	FALSE	0.306	79.000	0.008	1.000	N	NA
3750605	3750606	CMM_1661	CMM_1662	fadB	fadA	TRUE	0.996	-3.000	0.812	1.000	Y	NA
3750606	3750607	CMM_1662	CMM_1663	fadA		FALSE	0.435	72.000	0.032	1.000	N	NA
3750607	3750608	CMM_1663	CMM_1664			TRUE	0.923	-3.000	0.115	NA		NA
3750608	3750609	CMM_1664	CMM_1665			FALSE	0.221	95.000	0.025	NA		NA
3750609	3750610	CMM_1665	CMM_1666			TRUE	0.810	-3.000	0.027	NA		NA
3750610	3750611	CMM_1666	CMM_1667		sseA	TRUE	0.970	-3.000	0.351	NA		NA
3750612	3750613	CMM_1668	CMM_1669		amtB	FALSE	0.014	253.000	0.000	NA		NA
3750613	3750614	CMM_1669	CMM_1670	amtB		FALSE	0.021	249.000	0.000	1.000		NA
3750614	3750615	CMM_1670	CMM_1671			FALSE	0.020	207.000	0.000	NA		NA
3750615	3750616	CMM_1671	CMM_1672			TRUE	0.589	-3.000	0.000	NA		NA
3750616	3750617	CMM_1672	CMM_1673		xysA	FALSE	0.129	149.000	0.000	1.000	N	NA
3750617	3750618	CMM_1673	CMM_1674	xysA	xysB	FALSE	0.418	171.000	0.000	0.001	Y	NA
3750620	3750621	CMM_1676	CMM_1677			FALSE	0.058	138.000	0.000	NA		NA
3750622	3750623	CMM_1678	CMM_1679			TRUE	0.803	-3.000	0.000	1.000	N	NA
3750623	3750624	CMM_1679	CMM_1680			FALSE	0.524	40.000	0.029	1.000	N	NA
3750625	3750626	CMM_1681	CMM_1682		glpQ2	TRUE	0.589	-3.000	0.000	NA		NA
3750626	3750627	CMM_1682	CMM_1683	glpQ2		FALSE	0.365	61.000	0.048	NA		NA
3750628	3750629	CMM_1684	CMM_1685			FALSE	0.435	42.000	0.035	1.000		NA
3750629	3750630	CMM_1685	CMM_1686		tatC	FALSE	0.524	95.000	0.166	NA		NA
3750630	3750631	CMM_1686	CMM_1687	tatC	tatA	TRUE	0.617	55.000	0.012	NA	Y	NA
3750631	3750632	CMM_1687	CMM_1688	tatA		FALSE	0.050	198.000	0.000	NA	N	NA
3750632	3750633	CMM_1688	CMM_1689			TRUE	0.995	-3.000	0.767	NA	Y	NA
3750633	3750634	CMM_1689	CMM_1690			FALSE	0.134	49.000	0.000	NA		NA
3750634	3750635	CMM_1690	CMM_1691			FALSE	0.160	62.000	0.000	1.000		NA
3750635	3750636	CMM_1691	CMM_1692			TRUE	0.783	-3.000	0.014	1.000		NA
3750638	3750639	CMM_1694	CMM_1695	cysS2	bacA	TRUE	0.892	5.000	0.071	1.000	N	NA
3750639	3750640	CMM_1695	CMM_1696	bacA		FALSE	0.336	43.000	0.000	1.000	N	NA
3750641	3750642	CMM_tRNA_0027	CMM_1697		corA1	FALSE	0.057	139.000	0.000	NA		NA
3750642	3750643	CMM_1697	CMM_1698	corA1		FALSE	0.323	45.000	0.000	1.000	N	NA
3750645	3750646	CMM_1700	CMM_1701			TRUE	0.955	-7.000	0.043	1.000	Y	NA
3750646	3750647	CMM_1701	CMM_1702			TRUE	0.963	-3.000	0.042	1.000	Y	NA
3750647	3750648	CMM_1702	CMM_1703			TRUE	0.976	3.000	0.229	0.063	N	NA
3750649	3750650	CMM_1704	CMM_1705			FALSE	0.058	201.000	0.000	1.000	N	NA
3750650	3750651	CMM_1705	CMM_1706			FALSE	0.176	52.000	0.000	1.000		NA
3750653	3750654	CMM_1708	CMM_1709	pbpX		TRUE	0.848	-3.000	0.012	1.000	N	NA
3750655	3750656	CMM_1710	CMM_1711			TRUE	0.851	-3.000	0.012	1.000	N	NA
3750657	3750658	CMM_1712	CMM_1713			TRUE	0.674	-3.000	0.000	1.000		NA
3750659	3750660	CMM_1714	CMM_1715		dnaQ	TRUE	0.610	11.000	0.005	1.000	N	NA
3750661	3750662	CMM_1716	CMM_1717	rpmE	modF	FALSE	0.180	132.000	0.004	1.000	N	NA
3750662	3750663	CMM_1717	CMM_1718	modF		TRUE	0.601	82.000	0.119	1.000	N	NA
3750664	3750665	CMM_1719	CMM_1720	glgC	serB2	TRUE	0.863	-3.000	0.015	1.000	N	NA
3750666	3750667	CMM_1721	CMM_1722			FALSE	0.227	24.000	0.000	NA		NA
3750668	3750669	CMM_1723	CMM_1724			TRUE	0.589	-3.000	0.000	NA		NA
3750669	3750670	CMM_1724	CMM_1725			TRUE	0.884	-3.000	0.062	NA		NA
3750671	3750672	CMM_1726	CMM_1727			FALSE	0.040	225.000	0.019	NA		NA
3750672	3750673	CMM_1727	CMM_1728			TRUE	0.783	-3.000	0.021	NA		NA
3750673	3750674	CMM_1728	CMM_1729			TRUE	0.733	14.000	0.046	1.000	N	NA
3750674	3750675	CMM_1729	CMM_1730			TRUE	0.925	-3.000	0.063	1.000	N	NA
3750675	3750676	CMM_1730	CMM_1731			TRUE	0.993	1.000	0.266	0.001	Y	NA
3750679	3750680	CMM_1734	CMM_1735	tktA	talA	TRUE	0.604	155.000	0.135	1.000	Y	NA
3750680	3750681	CMM_1735	CMM_1736	talA	pgiA	TRUE	0.956	-3.000	0.025	1.000	Y	NA
3750681	3750682	CMM_1736	CMM_1737	pgiA	zwfA2	TRUE	0.811	39.000	0.061	1.000	Y	NA
3750682	3750683	CMM_1737	CMM_1738	zwfA2	opcA	TRUE	0.993	-3.000	0.583	NA	Y	NA
3750683	3750684	CMM_1738	CMM_1739	opcA	pglA	TRUE	0.991	-3.000	0.463	NA	Y	NA
3750685	3750686	CMM_1740	CMM_1741		secG	TRUE	0.564	12.000	0.027	NA		NA
3750686	3750687	CMM_1741	CMM_1742	secG	tpiA	FALSE	0.261	144.000	0.064	1.000		NA
3750687	3750688	CMM_1742	CMM_1743	tpiA	pgk	TRUE	0.972	-3.000	0.075	1.000	Y	NA
3750688	3750689	CMM_1743	CMM_1744	pgk	gapA	TRUE	0.963	7.000	0.055	0.004	Y	NA
3750689	3750690	CMM_1744	CMM_1745	gapA	sodA	FALSE	0.330	128.000	0.041	1.000	N	NA
3750690	3750691	CMM_1745	CMM_1746	sodA	whiA	FALSE	0.055	169.000	0.009	NA		NA
3750691	3750692	CMM_1746	CMM_1747	whiA		TRUE	0.613	30.000	0.076	NA		NA
3750692	3750693	CMM_1747	CMM_1748		uvrC	FALSE	0.434	76.000	0.073	NA		NA
3750693	3750694	CMM_1748	CMM_1749	uvrC	uvrA	TRUE	0.984	0.000	0.043	0.001	Y	NA
3750694	3750695	CMM_1749	CMM_1750	uvrA	uvrB	TRUE	0.881	83.000	0.154	0.001	Y	NA
3750695	3750696	CMM_1750	CMM_1751	uvrB	coaE	TRUE	0.830	10.000	0.026	0.097	N	NA
3750696	3750697	CMM_1751	CMM_1752	coaE	rpsA	FALSE	0.357	87.000	0.024	1.000	N	NA
3750697	3750698	CMM_1752	CMM_1753	rpsA		FALSE	0.025	187.000	0.000	NA		NA
3750698	3750699	CMM_1753	CMM_1754			TRUE	0.589	-3.000	0.000	NA		NA
3750699	3750700	CMM_1754	CMM_1755		polA1	FALSE	0.336	43.000	0.000	1.000	N	NA
3750704	3750705	CMM_1758	CMM_1759	pykA	gltD	FALSE	0.391	87.000	0.031	1.000	N	NA
3750705	3750706	CMM_1759	CMM_1760	gltD	gltB	TRUE	0.971	-7.000	0.022	0.001	Y	NA
3750706	3750707	CMM_1760	CMM_1761	gltB		TRUE	0.669	108.000	0.222	1.000	N	NA
3750707	3750708	CMM_1761	CMM_1762		trpA	FALSE	0.322	72.000	0.009	1.000	N	NA
3750708	3750709	CMM_1762	CMM_1763	trpA	trpB	TRUE	0.989	-3.000	0.153	0.001	Y	NA
3750709	3750710	CMM_1763	CMM_1764	trpB	trpC	TRUE	0.978	-3.000	0.025	0.001	Y	NA
3750710	3750711	CMM_1764	CMM_1765	trpC		TRUE	0.968	0.000	0.286	NA		NA
3750711	3750712	CMM_1765	CMM_1766			FALSE	0.446	105.000	0.109	NA		NA
3750712	3750713	CMM_1766	CMM_1767		trpE1	TRUE	0.988	0.000	0.690	NA		NA
3750713	3750714	CMM_1767	CMM_1768	trpE1	hisI	TRUE	0.966	-3.000	0.050	1.000	Y	NA
3750714	3750715	CMM_1768	CMM_1769	hisI	hisF	TRUE	0.995	-3.000	0.430	0.004	Y	NA
3750715	3750716	CMM_1769	CMM_1770	hisF	hisG	TRUE	0.967	3.000	0.008	0.004	Y	NA
3750716	3750717	CMM_1770	CMM_1771	hisG	hisE	TRUE	0.873	49.000	0.081	0.004	Y	NA
3750717	3750718	CMM_1771	CMM_1772	hisE		FALSE	0.125	100.000	0.000	1.000		NA
3750718	3750719	CMM_1772	CMM_1773		rpeA	FALSE	0.243	35.000	0.000	1.000		NA
3750719	3750720	CMM_1773	CMM_1774	rpeA		TRUE	0.791	11.000	0.056	1.000	N	NA
3750720	3750721	CMM_1774	CMM_1775		fmtA	TRUE	0.988	-3.000	0.305	1.000	Y	NA
3750721	3750722	CMM_1775	CMM_1776	fmtA	priA	FALSE	0.256	92.000	0.012	NA	N	NA
3750722	3750723	CMM_1776	CMM_1777	priA	metK	TRUE	0.589	43.000	0.068	NA	N	NA
3750723	3750724	CMM_1777	CMM_1778	metK	dfpA	TRUE	0.804	40.000	0.059	1.000	Y	NA
3750724	3750725	CMM_1778	CMM_1779	dfpA	rpoZ	TRUE	0.690	79.000	0.192	1.000	N	NA
3750725	3750726	CMM_1779	CMM_1780	rpoZ	gmkA	TRUE	0.861	49.000	0.471	1.000	N	NA
3750726	3750727	CMM_1780	CMM_1781	gmkA	pyrF	TRUE	0.949	-3.000	0.013	1.000	Y	NA
3750727	3750728	CMM_1781	CMM_1782	pyrF	carB	TRUE	0.972	-3.000	0.075	1.000	Y	NA
3750728	3750729	CMM_1782	CMM_1783	carB	carA	TRUE	0.995	0.000	0.345	0.001	Y	NA
3750729	3750730	CMM_1783	CMM_1784	carA		TRUE	0.864	-3.000	0.050	NA		NA
3750730	3750731	CMM_1784	CMM_1785		pyrC	TRUE	0.874	-3.000	0.057	NA		NA
3750731	3750732	CMM_1785	CMM_1786	pyrC	pyrB	TRUE	0.991	-3.000	0.452	1.000	Y	NA
3750732	3750733	CMM_1786	CMM_1787	pyrB	pyrR	TRUE	0.986	-3.000	0.247	1.000	Y	NA
3750733	3750734	CMM_1787	CMM_1788	pyrR	acsA2	FALSE	0.204	113.000	0.000	1.000	N	NA
3750734	3750735	CMM_1788	CMM_1789	acsA2		FALSE	0.470	75.000	0.045	1.000	N	NA
3750735	3750736	CMM_1789	CMM_1790			TRUE	0.997	-3.000	0.795	0.062	Y	NA
3750736	3750737	CMM_1790	CMM_1791			TRUE	0.815	73.000	0.146	1.000	Y	NA
3750737	3750738	CMM_1791	CMM_1792		nusB	FALSE	0.214	108.000	0.000	1.000	N	NA
3750738	3750739	CMM_1792	CMM_1793	nusB	efpA	TRUE	0.912	4.000	0.078	1.000	N	NA
3750739	3750740	CMM_1793	CMM_1794	efpA	aroQ	FALSE	0.229	112.000	0.005	1.000	N	NA
3750740	3750741	CMM_1794	CMM_1795	aroQ		FALSE	0.398	33.000	0.000	1.000	N	NA
3750741	3750742	CMM_1795	CMM_1796		aroB	TRUE	0.899	-3.000	0.000	0.052	N	NA
3750742	3750743	CMM_1796	CMM_1797	aroB	aroK	TRUE	0.980	-3.000	0.147	1.000	Y	NA
3750743	3750744	CMM_1797	CMM_1798	aroK	aroC	TRUE	0.958	3.000	0.041	1.000	Y	NA
3750744	3750745	CMM_1798	CMM_1799	aroC	aroE	TRUE	0.603	89.000	0.021	1.000	Y	NA
3750745	3750746	CMM_1799	CMM_1800	aroE		TRUE	0.827	-7.000	0.045	NA		NA
3750746	3750747	CMM_1800	CMM_1801			FALSE	0.031	365.000	0.039	NA		NA
3750747	3750748	CMM_1801	CMM_1802		alaS	TRUE	0.954	0.000	0.103	1.000	N	NA
3750748	3750749	CMM_1802	CMM_1803	alaS		TRUE	0.675	6.000	0.023	NA		NA
3750749	3750750	CMM_1803	CMM_1804		rpsD	FALSE	0.026	183.000	0.000	NA		NA
3750750	3750751	CMM_1804	CMM_1805	rpsD		FALSE	0.047	249.000	0.005	1.000	N	NA
3750752	3750753	CMM_1807	CMM_1808			FALSE	0.447	94.000	0.103	NA		NA
3750754	3750755	CMM_1809	CMM_1810	relA		FALSE	0.208	139.000	0.024	NA	N	NA
3750755	3750756	CMM_1810	CMM_1811		secF	TRUE	0.817	-3.000	0.009	NA	N	NA
3750756	3750757	CMM_1811	CMM_1812	secF	secD	TRUE	0.995	0.000	0.336	0.001	Y	NA
3750757	3750758	CMM_1812	CMM_1813	secD		TRUE	0.601	127.000	0.062	NA	Y	NA
3750758	3750759	CMM_1813	CMM_1814		ruvB	FALSE	0.488	77.000	0.063	NA	N	NA
3750759	3750760	CMM_1814	CMM_1815	ruvB	ruvA	TRUE	0.996	-3.000	0.549	0.001	Y	NA
3750760	3750761	CMM_1815	CMM_1816	ruvA	ruvC	TRUE	0.979	17.000	0.451	0.007	Y	NA
3750761	3750762	CMM_1816	CMM_1817	ruvC		TRUE	0.717	52.000	0.277	NA		NA
3750762	3750763	CMM_1817	CMM_1818			FALSE	0.363	78.000	0.055	NA		NA
3750763	3750764	CMM_1818	CMM_1819			TRUE	0.944	-10.000	0.030	NA	Y	NA
3750764	3750765	CMM_1819	CMM_1820			TRUE	0.711	14.000	0.000	0.042	N	NA
3750765	3750766	CMM_1820	CMM_1821		thrS	TRUE	0.769	45.000	0.208	1.000	N	NA
3750766	3750767	CMM_1821	CMM_tRNA_0029	thrS		FALSE	0.061	136.000	0.000	NA		NA
3750767	3750768	CMM_tRNA_0029	CMM_tRNA_0030			FALSE	0.324	11.000	0.000	NA		NA
3750768	3750769	CMM_tRNA_0030	CMM_tRNA_0031			FALSE	0.117	62.000	0.000	NA		NA
3750772	3750773	CMM_1823	CMM_1824	glpD		FALSE	0.195	117.000	0.000	1.000	N	NA
3750776	3750777	CMM_1827	CMM_1828			TRUE	0.977	-3.000	0.442	1.000		NA
3750777	3750778	CMM_1828	CMM_1829			TRUE	0.972	4.000	0.242	0.001		NA
3750779	3750780	CMM_1830	CMM_1831	glpF	glpK	TRUE	0.809	30.000	0.174	1.000	N	NA
3750781	3750782	CMM_1832	CMM_1833		trpD	FALSE	0.117	62.000	0.000	NA		NA
3750783	3750784	CMM_1834	CMM_1835	ctaE	qcrC	TRUE	0.829	27.000	0.000	0.031	Y	NA
3750784	3750785	CMM_1835	CMM_1836	qcrC	qcrA	TRUE	0.746	46.000	0.000	0.031	Y	NA
3750785	3750786	CMM_1836	CMM_1837	qcrA	qcrB	TRUE	0.993	-16.000	0.457	0.031	Y	NA
3750786	3750787	CMM_1837	CMM_1838	qcrB		FALSE	0.111	115.000	0.000	1.000		NA
3750787	3750788	CMM_1838	CMM_PS_17			FALSE	0.016	232.000	0.000	NA		NA
3750789	3750790	CMM_1839	CMM_1840			FALSE	0.469	5.000	0.000	NA		NA
3750790	3750791	CMM_1840	CMM_1841		ctaD	TRUE	0.960	2.000	0.250	NA		NA
3750791	3750792	CMM_1841	CMM_1842	ctaD	ctaC	TRUE	0.976	13.000	0.284	0.001	Y	NA
3750792	3750793	CMM_1842	CMM_1843	ctaC		FALSE	0.137	125.000	0.014	NA		NA
3750793	3750794	CMM_1843	CMM_1844			FALSE	0.092	128.000	0.005	NA		NA
3750796	3750797	CMM_1846	CMM_1847	pyrD		FALSE	0.255	64.000	0.004	NA	N	NA
3750797	3750798	CMM_1847	CMM_1848		hisD	FALSE	0.520	18.000	0.011	NA	N	NA
3750800	3750801	CMM_1850	CMM_1851	dnaE		FALSE	0.346	77.000	0.014	1.000	N	NA
3750801	3750802	CMM_1851	CMM_1852			FALSE	0.061	136.000	0.000	NA		NA
3750802	3750803	CMM_1852	CMM_1853			FALSE	0.311	147.000	0.114	NA		NA
3750803	3750804	CMM_1853	CMM_1854			TRUE	0.593	61.000	0.165	NA		NA
3750804	3750805	CMM_1854	CMM_1855			TRUE	0.845	49.000	0.581	NA		NA
3750805	3750806	CMM_1855	CMM_1856		ftsZ	TRUE	0.676	-3.000	0.006	NA		NA
3750806	3750807	CMM_1856	CMM_1857	ftsZ	ftsQ	FALSE	0.327	138.000	0.067	NA	N	NA
3750807	3750808	CMM_1857	CMM_1858	ftsQ	murC	FALSE	0.154	534.000	0.134	NA	Y	NA
3750808	3750809	CMM_1858	CMM_1859	murC	murG	TRUE	0.904	43.000	0.270	1.000	Y	NA
3750809	3750810	CMM_1859	CMM_1860	murG	ftsW2	TRUE	0.959	-3.000	0.167	1.000	N	NA
3750810	3750811	CMM_1860	CMM_1861	ftsW2	murD	TRUE	0.957	-43.000	0.081	0.004	N	NA
3750811	3750812	CMM_1861	CMM_1862	murD	mraY	TRUE	0.996	3.000	0.647	0.005	Y	NA
3750812	3750813	CMM_1862	CMM_1863	mraY	murF	TRUE	0.980	-6.000	0.071	0.005	Y	NA
3750813	3750814	CMM_1863	CMM_1864	murF	murE	TRUE	0.995	2.000	0.367	0.001	Y	NA
3750814	3750815	CMM_1864	CMM_1865	murE	ftsI	TRUE	0.963	13.000	0.333	1.000	Y	NA
3750815	3750816	CMM_1865	CMM_1866	ftsI		FALSE	0.093	92.000	0.000	NA		NA
3750816	3750817	CMM_1866	CMM_1867		mraW	TRUE	0.589	-3.000	0.000	NA		NA
3750817	3750818	CMM_1867	CMM_1868	mraW	mraZ	TRUE	0.795	104.000	0.635	NA		NA
3750818	3750819	CMM_1868	CMM_1869	mraZ		FALSE	0.009	339.000	0.000	NA		NA
3750822	3750823	CMM_1872	CMM_1873		pknE	FALSE	0.480	83.000	0.021	0.096	N	NA
3750824	3750825	CMM_1874	CMM_1875	aroG		TRUE	0.583	60.000	0.082	1.000	N	NA
3750825	3750826	CMM_1875	CMM_1876		glkA	TRUE	0.681	79.000	0.182	1.000	N	NA
3750828	3750829	CMM_1878	CMM_1879	defB		FALSE	0.387	35.000	0.000	1.000	N	NA
3750829	3750830	CMM_1879	CMM_1880		pycA	TRUE	0.886	16.000	0.014	0.035	Y	NA
3750832	3750833	CMM_1882	CMM_1883			FALSE	0.185	542.000	0.060	0.007	Y	NA
3750833	3750834	CMM_1883	CMM_1884			TRUE	0.990	0.000	0.707	NA	N	NA
3750834	3750835	CMM_1884	CMM_1885		dctA	FALSE	0.196	89.000	0.000	NA	N	NA
3750836	3750837	CMM_1886	CMM_1887	dctS	dctR	TRUE	0.985	-3.000	0.222	1.000	Y	NA
3750837	3750838	CMM_1887	CMM_1888	dctR		FALSE	0.127	94.000	0.000	1.000		NA
3750838	3750839	CMM_1888	CMM_1889			TRUE	0.877	1.000	0.043	1.000		NA
3750839	3750840	CMM_1889	CMM_1890			TRUE	0.589	-3.000	0.000	NA		NA
3750842	3750843	CMM_1892	CMM_1893			TRUE	0.849	-3.000	0.000	0.062		NA
3750843	3750844	CMM_1893	CMM_1894			TRUE	0.966	0.000	0.000	0.062	Y	NA
3750844	3750845	CMM_1894	CMM_1895			TRUE	0.795	8.000	0.000	0.062	N	NA
3750845	3750846	CMM_1895	CMM_1896			TRUE	0.803	-3.000	0.000	1.000	N	NA
3750850	3750851	CMM_1900	CMM_1901			FALSE	0.194	32.000	0.000	NA		NA
3750855	3750856	CMM_1905	CMM_1906			FALSE	0.018	222.000	0.000	NA		NA
3750856	3750857	CMM_1906	CMM_1907			FALSE	0.147	44.000	0.000	NA		NA
3750858	3750859	CMM_1908	CMM_1909		cpsY	TRUE	0.674	-3.000	0.000	1.000		NA
3750859	3750860	CMM_1909	CMM_1910	cpsY		FALSE	0.027	181.000	0.000	NA		NA
3750861	3750862	CMM_1911	CMM_1912			TRUE	0.997	-3.000	0.750	0.031	Y	NA
3750863	3750864	CMM_1913	CMM_1914			TRUE	0.767	-3.000	0.000	NA	N	NA
3750865	3750866	CMM_1915	CMM_1916			FALSE	0.132	50.000	0.000	NA		NA
3750866	3750867	CMM_1916	CMM_1917			FALSE	0.020	212.000	0.000	NA		NA
3750868	3750869	CMM_1918	CMM_1919			TRUE	0.589	-3.000	0.000	NA		NA
3750871	3750872	CMM_1921	CMM_1922			FALSE	0.066	131.000	0.000	NA		NA
3750872	3750873	CMM_1922	CMM_1923		ggtA	FALSE	0.270	69.000	0.000	1.000	N	NA
3750874	3750875	CMM_1924	CMM_1925			FALSE	0.186	98.000	0.000	NA	N	NA
3750875	3750876	CMM_1925	CMM_1926			FALSE	0.082	113.000	0.000	NA		NA
3750876	3750877	CMM_1926	CMM_1927			TRUE	0.589	-3.000	0.000	NA		NA
3750877	3750878	CMM_1927	CMM_1928			FALSE	0.044	156.000	0.000	NA		NA
3750879	3750880	CMM_1929	CMM_1930			FALSE	0.210	42.000	0.000	1.000		NA
3750880	3750881	CMM_1930	CMM_1931			TRUE	0.925	-3.000	0.095	1.000		NA
3750881	3750882	CMM_1931	CMM_1932			FALSE	0.198	115.000	0.000	1.000	N	NA
3750885	3750886	CMM_1935	CMM_1936			FALSE	0.161	180.000	0.000	0.023	N	NA
3750886	3750887	CMM_1936	CMM_1937			FALSE	0.015	248.000	0.000	NA		NA
3750887	3750888	CMM_1937	CMM_1938			FALSE	0.092	93.000	0.000	NA		NA
3750889	3750890	CMM_1939	CMM_1940			TRUE	0.911	0.000	0.000	0.001		NA
3750890	3750891	CMM_1940	CMM_1941			FALSE	0.004	1310.000	0.000	NA		NA
3750893	3750894	CMM_1943	CMM_1944			TRUE	0.589	-3.000	0.000	NA		NA
3750894	3750895	CMM_1944	CMM_1945			FALSE	0.090	101.000	0.000	NA		NA
3750895	3750896	CMM_1945	CMM_1946			TRUE	0.960	-3.000	0.190	NA	N	NA
3750897	3750898	CMM_1947	CMM_1948	ppaH	ppaI	FALSE	0.281	112.000	0.000	0.041		NA
3750898	3750899	CMM_1948	CMM_1949	ppaI		FALSE	0.057	256.000	0.000	0.041		NA
3750900	3750901	CMM_1950	CMM_1951			FALSE	0.476	21.000	0.000	1.000	N	NA
3750901	3750902	CMM_1951	CMM_1952		betT	TRUE	0.990	-3.000	0.750	1.000	N	NA
3750902	3750903	CMM_1952	CMM_1953	betT		FALSE	0.017	228.000	0.000	NA		NA
3750903	3750904	CMM_1953	CMM_1954			TRUE	0.589	-3.000	0.000	NA		NA
3750904	3750905	CMM_1954	CMM_1955			TRUE	0.975	-3.000	0.455	NA		NA
3750905	3750906	CMM_1955	CMM_1956			TRUE	0.971	-3.000	0.375	NA		NA
3750906	3750907	CMM_1956	CMM_1957			TRUE	0.984	-3.000	0.667	NA		NA
3750907	3750908	CMM_1957	CMM_1958			TRUE	0.991	-3.000	0.955	1.000		NA
3750908	3750909	CMM_1958	CMM_1959			TRUE	0.997	-3.000	0.864	0.061	Y	NA
3750909	3750910	CMM_1959	CMM_1960			TRUE	0.977	41.000	0.792	0.061	Y	NA
3750912	3750913	CMM_1962	CMM_1963	clvE	clvG	TRUE	0.954	6.000	0.429	NA		NA
3750913	3750914	CMM_1963	CMM_1964	clvG	clvF	TRUE	0.947	-3.000	0.188	NA		NA
3750914	3750915	CMM_1964	CMM_1965	clvF	clvR	FALSE	0.121	154.000	0.000	1.000	N	NA
3750915	3750916	CMM_1965	CMM_1966	clvR	clvK	TRUE	0.964	-3.000	0.000	0.016	Y	NA
3750917	3750918	CMM_1967	CMM_1968	clvA	clvM	FALSE	0.093	92.000	0.000	NA		NA
3750919	3750920	CMM_1969	CMM_1970			FALSE	0.093	130.000	0.000	1.000		NA
3750920	3750921	CMM_1970	CMM_1971			FALSE	0.029	210.000	0.000	1.000		NA
3750921	3750922	CMM_1971	CMM_tRNA_0033			FALSE	0.007	434.000	0.000	NA		NA
3750922	3750923	CMM_tRNA_0033	CMM_1972			FALSE	0.113	74.000	0.000	NA		NA
3750925	3750926	CMM_1974	CMM_1975	engA	cmkA	FALSE	0.238	40.000	0.002	1.000		NA
3750926	3750927	CMM_1975	CMM_1976	cmkA		TRUE	0.895	-3.000	0.032	1.000	N	NA
3750927	3750928	CMM_1976	CMM_1977		rluA	FALSE	0.531	39.000	0.030	1.000	N	NA
3750928	3750929	CMM_1977	CMM_1978	rluA		TRUE	0.957	-16.000	0.224	NA	N	NA
3750929	3750930	CMM_1978	CMM_1979			TRUE	0.975	-10.000	0.570	NA		NA
3750930	3750931	CMM_1979	CMM_1980			FALSE	0.437	56.000	0.065	NA		NA
3750931	3750932	CMM_1980	CMM_1981		xerD	FALSE	0.515	70.000	0.058	1.000	N	NA
3750932	3750933	CMM_1981	CMM_1982	xerD		TRUE	0.969	-3.000	0.063	1.000	Y	NA
3750933	3750934	CMM_1982	CMM_1983		pyrG	TRUE	0.917	-3.000	0.055	1.000	N	NA
3750934	3750935	CMM_1983	CMM_1984	pyrG	recN	FALSE	0.305	74.000	0.006	1.000	N	NA
3750935	3750936	CMM_1984	CMM_1985	recN	ppnK	TRUE	0.931	-7.000	0.094	1.000	N	NA
3750936	3750937	CMM_1985	CMM_1986	ppnK		TRUE	0.911	6.000	0.120	1.000	N	NA
3750937	3750938	CMM_1986	CMM_1987			FALSE	0.540	-7.000	0.000	NA		NA
3750938	3750939	CMM_1987	CMM_1988			FALSE	0.356	10.000	0.000	NA		NA
3750939	3750940	CMM_1988	CMM_1989			TRUE	0.973	-10.000	0.500	NA		NA
3750940	3750941	CMM_1989	CMM_RNA_0001			FALSE	0.004	984.000	0.000	NA		NA
3750941	3750942	CMM_RNA_0001	CMM_rRNA_0004			FALSE	0.085	111.000	0.000	NA		NA
3750942	3750943	CMM_rRNA_0004	CMM_RNA_0001a			FALSE	0.007	421.000	0.000	NA		NA
3750943	3750944	CMM_RNA_0001a	CMM_1990		tyrS	FALSE	0.006	556.000	0.000	NA		NA
3750945	3750946	CMM_1991	CMM_1992			TRUE	0.589	-3.000	0.000	NA		NA
3750947	3750948	CMM_1993	CMM_1994			FALSE	0.396	8.000	0.000	NA		NA
3750948	3750949	CMM_1994	CMM_1995		argH	TRUE	0.589	-3.000	0.000	NA		NA
3750949	3750950	CMM_1995	CMM_1996	argH	argG	TRUE	0.979	5.000	0.278	1.000	Y	NA
3750950	3750951	CMM_1996	CMM_1997	argG	argF	TRUE	0.805	49.000	0.088	1.000	Y	NA
3750951	3750952	CMM_1997	CMM_1998	argF	argD	TRUE	0.586	150.000	0.091	1.000	Y	NA
3750952	3750953	CMM_1998	CMM_1999	argD	argB	TRUE	0.977	-3.000	0.105	1.000	Y	NA
3750953	3750954	CMM_1999	CMM_2000	argB	argJ	TRUE	0.962	24.000	0.239	0.002	Y	NA
3750954	3750955	CMM_2000	CMM_2001	argJ	argC	TRUE	0.993	-3.000	0.303	0.002	Y	NA
3750955	3750956	CMM_2001	CMM_2002	argC	pheT	FALSE	0.228	130.000	0.014	1.000	N	NA
3750956	3750957	CMM_2002	CMM_2003	pheT	pheS	TRUE	0.996	3.000	0.574	0.001	Y	NA
3750957	3750958	CMM_2003	CMM_2004	pheS	gluD	FALSE	0.172	129.000	0.000	1.000	N	NA
3750958	3750959	CMM_2004	CMM_2005	gluD	gluC	TRUE	0.995	-3.000	0.429	0.005	Y	NA
3750959	3750960	CMM_2005	CMM_2006	gluC	gluB	TRUE	0.911	118.000	0.462	0.060	Y	NA
3750960	3750961	CMM_2006	CMM_2007	gluB	gluA	TRUE	0.594	155.000	0.121	1.000	Y	NA
3750961	3750962	CMM_2007	CMM_2008	gluA		FALSE	0.124	152.000	0.000	1.000	N	NA
3750962	3750963	CMM_2008	CMM_2009		rplT	TRUE	0.824	63.000	0.057	0.013	Y	NA
3750963	3750964	CMM_2009	CMM_2010	rplT	rpmI	TRUE	0.981	47.000	0.928	0.016	Y	NA
3750964	3750965	CMM_2010	CMM_2011	rpmI	infC	TRUE	0.993	-7.000	0.652	1.000	Y	NA
3750967	3750968	CMM_2013	CMM_2014		hisA	TRUE	0.953	-3.000	0.215	NA		NA
3750968	3750969	CMM_2014	CMM_2015	hisA	hisH	TRUE	0.950	64.000	0.491	0.004	Y	NA
3750969	3750970	CMM_2015	CMM_2016	hisH	hisB	TRUE	0.980	-3.000	0.046	0.004	Y	NA
3750970	3750971	CMM_2016	CMM_2017	hisB		FALSE	0.115	113.000	0.000	1.000		NA
3750975	3750976	CMM_2021	CMM_2022	dapF	miaA	TRUE	0.823	10.000	0.062	1.000	N	NA
3750976	3750977	CMM_2022	CMM_2023	miaA	miaB	TRUE	0.958	-3.000	0.028	1.000	Y	NA
3750977	3750978	CMM_2023	CMM_2024	miaB	recX	FALSE	0.291	51.000	0.016	1.000		NA
3750978	3750979	CMM_2024	CMM_2025	recX	recA	FALSE	0.099	597.000	0.296	1.000		NA
3750979	3750980	CMM_2025	CMM_2026	recA		FALSE	0.027	283.000	0.017	NA		NA
3750980	3750981	CMM_2026	CMM_2027			TRUE	0.594	77.000	0.177	NA		NA
3750981	3750982	CMM_2027	CMM_2028			FALSE	0.223	140.000	0.057	NA		NA
3750982	3750983	CMM_2028	CMM_2029		pgsA	TRUE	0.935	-3.000	0.151	NA		NA
3750983	3750984	CMM_2029	CMM_2030	pgsA	ftsK	TRUE	0.909	4.000	0.025	0.052	N	NA
3750984	3750985	CMM_2030	CMM_2031	ftsK		FALSE	0.270	69.000	0.000	1.000	N	NA
3750985	3750986	CMM_2031	CMM_2032			TRUE	0.996	-3.000	0.800	1.000	Y	NA
3750986	3750987	CMM_2032	CMM_2033			TRUE	0.937	-3.000	0.154	NA		NA
3750987	3750988	CMM_2033	CMM_2034			FALSE	0.019	213.000	0.000	NA		NA
3750988	3750989	CMM_2034	CMM_2035		dapA	TRUE	0.673	59.000	0.206	1.000		NA
3750993	3750994	CMM_2039	CMM_2040		dapB	TRUE	0.710	0.000	0.000	1.000		NA
3750994	3750995	CMM_2040	CMM_2041	dapB	gmpB	FALSE	0.236	60.000	0.000	NA	N	NA
3750995	3750996	CMM_2041	CMM_2042	gmpB	pepR	FALSE	0.473	9.000	0.007	NA		NA
3750996	3750997	CMM_2042	CMM_2043	pepR		FALSE	0.116	64.000	0.000	NA		NA
3750997	3750998	CMM_2043	CMM_2044			FALSE	0.005	708.000	0.000	NA		NA
3750999	3751000	CMM_2045	CMM_2046			FALSE	0.233	23.000	0.000	NA		NA
3751001	3751002	CMM_2047	CMM_2048	pnpA	rpsO	FALSE	0.073	478.000	0.011	1.000	Y	NA
3751003	3751004	CMM_2049	CMM_2050			FALSE	0.213	27.000	0.000	NA		NA
3751005	3751006	CMM_2051	CMM_2052			FALSE	0.124	105.000	0.000	1.000		NA
3751006	3751007	CMM_2052	CMM_2053			FALSE	0.089	105.000	0.000	NA		NA
3751011	3751012	CMM_2057	CMM_2058		lspA	FALSE	0.305	23.000	0.000	1.000		NA
3751012	3751013	CMM_2058	CMM_2059	lspA		FALSE	0.356	10.000	0.000	NA		NA
3751013	3751014	CMM_2059	CMM_2060			FALSE	0.136	48.000	0.000	NA		NA
3751014	3751015	CMM_2060	CMM_2061			FALSE	0.102	83.000	0.000	NA		NA
3751016	3751017	CMM_2062	CMM_2063	dpsB		FALSE	0.335	122.000	0.000	0.050	N	NA
3751017	3751018	CMM_2063	CMM_2064			TRUE	0.629	0.000	0.000	NA		NA
3751018	3751019	CMM_2064	CMM_2065			FALSE	0.106	80.000	0.000	NA		NA
3751019	3751020	CMM_2065	CMM_2066			TRUE	0.997	-3.000	0.750	0.016	Y	NA
3751021	3751022	CMM_2067	CMM_2068	dacB		FALSE	0.289	55.000	0.000	1.000	N	NA
3751022	3751023	CMM_2068	CMM_2069			FALSE	0.090	102.000	0.000	NA		NA
3751023	3751024	CMM_2069	CMM_2070			FALSE	0.090	102.000	0.000	NA		NA
3751024	3751025	CMM_2070	CMM_2071			FALSE	0.087	108.000	0.000	NA		NA
3751028	3751029	CMM_2074	CMM_2075			FALSE	0.228	91.000	0.000	1.000	N	NA
3751029	3751030	CMM_2075	CMM_2075A			FALSE	0.151	43.000	0.000	NA		NA
3751030	3751031	CMM_2075A	CMM_2076			FALSE	0.147	44.000	0.000	NA		NA
3751036	3751037	CMM_2081	CMM_2082			FALSE	0.284	98.000	0.000	0.060		NA
3751037	3751038	CMM_2082	CMM_2083			FALSE	0.071	126.000	0.000	NA		NA
3751038	3751039	CMM_2083	CMM_2084		pitB	TRUE	0.589	-3.000	0.000	NA		NA
3751039	3751040	CMM_2084	CMM_2085	pitB	lipT	FALSE	0.192	119.000	0.000	1.000	N	NA
3751040	3751041	CMM_2085	CMM_2086	lipT		TRUE	0.674	-3.000	0.000	1.000		NA
3751043	3751044	CMM_2088	CMM_2089			FALSE	0.084	137.000	0.000	1.000		NA
3751044	3751045	CMM_2089	CMM_PS_18			FALSE	0.130	51.000	0.000	NA		NA
3751045	3751046	CMM_PS_18	CMM_2090			FALSE	0.188	33.000	0.000	NA		NA
3751047	3751048	CMM_2091	CMM_2092		hsp20	FALSE	0.061	136.000	0.000	NA		NA
3751049	3751050	CMM_2093	CMM_2094	alcBC	alcA	TRUE	0.978	-3.000	0.143	NA	Y	NA
3751050	3751051	CMM_2094	CMM_2095	alcA		TRUE	0.987	-3.000	0.667	NA	N	NA
3751052	3751053	CMM_2095A	CMM_2095B			TRUE	0.595	2.000	0.000	NA		NA
3751053	3751054	CMM_2095B	CMM_2096			FALSE	0.090	102.000	0.000	NA		NA
3751054	3751055	CMM_2096	CMM_2097			TRUE	0.589	-3.000	0.000	NA		NA
3751055	3751056	CMM_2097	CMM_2098			FALSE	0.136	48.000	0.000	NA		NA
3751056	3751057	CMM_2098	CMM_2099			FALSE	0.095	129.000	0.000	1.000		NA
3751058	3751059	CMM_2100	CMM_2101			FALSE	0.009	344.000	0.000	NA		NA
3751061	3751062	CMM_2103	CMM_2104			FALSE	0.194	32.000	0.000	NA		NA
3751063	3751064	CMM_2105	CMM_2106			FALSE	0.075	122.000	0.000	NA		NA
3751064	3751065	CMM_2106	CMM_2107			TRUE	0.996	-3.000	0.667	0.060	Y	NA
3751065	3751066	CMM_2107	CMM_2108			TRUE	0.996	-3.000	0.667	0.060	Y	NA
3751066	3751067	CMM_2108	CMM_2109		lacZ	FALSE	0.397	137.000	0.000	1.000	Y	NA
3751067	3751068	CMM_2109	CMM_2110	lacZ		FALSE	0.209	111.000	0.000	1.000	N	NA
3751068	3751069	CMM_2110	CMM_2111			FALSE	0.198	115.000	0.000	1.000	N	NA
3751069	3751070	CMM_2111	CMM_2112			TRUE	0.701	4.000	0.000	NA	N	NA
3751070	3751071	CMM_2112	CMM_2113			FALSE	0.006	472.000	0.000	NA		NA
3751071	3751072	CMM_2113	CMM_2114		ptrB	FALSE	0.089	103.000	0.000	NA		NA
3751072	3751073	CMM_2114	THI2	ptrB		FALSE	0.115	65.000	0.000	NA		NA
3751073	3751074	THI2	CMM_2115		thiM	TRUE	0.638	-1.000	0.000	NA		NA
3751074	3751075	CMM_2115	CMM_2116	thiM	thiED	TRUE	0.971	-3.000	0.007	0.002	Y	NA
3751075	3751076	CMM_2116	CMM_2117	thiED		FALSE	0.028	180.000	0.000	NA		NA
3751076	3751077	CMM_2117	CMM_2118			FALSE	0.080	115.000	0.000	NA		NA
3751077	3751078	CMM_2118	CMM_2119			FALSE	0.012	283.000	0.000	NA		NA
3751080	3751081	CMM_2121	CMM_2122			TRUE	0.796	0.000	0.000	NA	N	NA
3751083	3751084	CMM_2124	CMM_2125			TRUE	0.589	-3.000	0.000	NA		NA
3751084	3751085	CMM_2125	CMM_2126			FALSE	0.122	58.000	0.000	NA		NA
3751086	3751087	CMM_2127	CMM_2128		poxB	FALSE	0.185	48.000	0.000	1.000		NA
3751093	3751094	CMM_2133	CMM_2134			FALSE	0.147	44.000	0.000	NA		NA
3751094	3751095	CMM_2134	CMM_2135			TRUE	0.589	-3.000	0.000	NA		NA
3751095	3751096	CMM_2135	CMM_2136			FALSE	0.113	74.000	0.000	NA		NA
3751098	3751099	CMM_2138	CMM_2139		cynX	FALSE	0.095	129.000	0.000	1.000		NA
3751101	3751102	CMM_2141	CMM_2142	ribF		TRUE	0.673	3.000	0.008	NA		NA
3751102	3751103	CMM_2142	CMM_2143			TRUE	0.693	38.000	0.167	NA		NA
3751103	3751104	CMM_2143	CMM_2144		truB	TRUE	0.706	-3.000	0.010	NA		NA
3751108	3751109	CMM_2148	CMM_2149	rbfA	infB	TRUE	0.731	180.000	0.530	1.000	Y	NA
3751109	3751110	CMM_2149	CMM_2150	infB		TRUE	0.602	97.000	0.171	NA	N	NA
3751110	3751111	CMM_2150	CMM_2151		nusA	TRUE	0.894	51.000	0.323	NA	Y	NA
3751111	3751112	CMM_2151	CMM_2152	nusA	proS	FALSE	0.237	87.000	0.000	1.000	N	NA
3751112	3751113	CMM_2152	CMM_2153	proS		FALSE	0.407	32.000	0.000	1.000	N	NA
3751113	3751114	CMM_2153	CMM_2154			TRUE	0.972	-3.000	0.154	0.040	N	NA
3751114	3751115	CMM_2154	CMM_2155			TRUE	0.959	8.000	0.154	1.000	Y	NA
3751115	3751116	CMM_2155	CMM_2156		ispG	FALSE	0.499	108.000	0.000	1.000	Y	NA
3751116	3751117	CMM_2156	CMM_2157	ispG		FALSE	0.497	91.000	0.072	1.000	N	NA
3751118	3751119	CMM_2158	CMM_2159	pknF		TRUE	0.589	-3.000	0.000	NA		NA
3751120	3751121	CMM_2160	CMM_2161	dxrA		TRUE	0.653	9.000	0.002	1.000	N	NA
3751121	3751122	CMM_2161	CMM_2162			FALSE	0.407	135.000	0.000	1.000	Y	NA
3751123	3751124	CMM_2163	CMM_2164	gabT		TRUE	0.966	0.000	0.044	NA	Y	NA
3751125	3751126	CMM_2165	CMM_2166			FALSE	0.094	91.000	0.000	NA		NA
3751126	3751127	CMM_2166	CMM_2167			TRUE	0.990	-3.000	0.880	NA		NA
3751127	3751128	CMM_2167	CMM_2168			TRUE	0.988	-3.000	0.808	NA		NA
3751128	3751129	CMM_2168	CMM_2169			TRUE	0.882	59.000	0.731	1.000		NA
3751129	3751130	CMM_2169	CMM_2170		pknG	TRUE	0.922	-3.000	0.091	1.000		NA
3751130	3751131	CMM_2170	CMM_2171	pknG	gltA	FALSE	0.111	158.000	0.000	1.000	N	NA
3751131	3751132	CMM_2171	CMM_2172	gltA		FALSE	0.260	162.000	0.064	1.000	N	NA
3751132	3751133	CMM_2172	CMM_2173		fdxB	TRUE	0.849	-3.000	0.012	1.000	N	NA
3751133	3751134	CMM_2173	CMM_2174	fdxB		FALSE	0.158	41.000	0.000	NA		NA
3751135	3751136	CMM_2175	CMM_2176			TRUE	0.820	77.000	0.180	NA	Y	NA
3751136	3751137	CMM_2176	CMM_2177			TRUE	0.996	0.000	0.812	NA	Y	NA
3751138	3751139	CMM_2178	CMM_2179		bipA	FALSE	0.417	7.000	0.000	NA		NA
3751139	3751140	CMM_2179	CMM_2180	bipA		FALSE	0.200	114.000	0.000	1.000	N	NA
3751140	3751141	CMM_2180	CMM_2181			FALSE	0.126	99.000	0.000	1.000		NA
3751143	3751144	CMM_2183	CMM_2184			TRUE	0.981	4.000	0.522	0.059		NA
3751144	3751145	CMM_2184	CMM_2185			FALSE	0.326	179.000	0.132	0.059		NA
3751146	3751147	CMM_2186	CMM_2187			FALSE	0.087	109.000	0.000	NA		NA
3751147	3751148	CMM_2187	CMM_2188			TRUE	0.977	-3.000	0.484	NA		NA
3751149	3751150	CMM_2189	CMM_2190			TRUE	0.969	-13.000	0.308	1.000	N	NA
3751150	3751151	CMM_2190	CMM_2191			TRUE	0.988	-3.000	0.122	0.001	Y	NA
3751151	3751152	CMM_2191	CMM_2192			TRUE	0.997	-3.000	0.654	0.003	Y	NA
3751152	3751153	CMM_2192	CMM_2193			TRUE	0.987	4.000	0.192	0.003	Y	NA
3751153	3751154	CMM_2193	CMM_2194			TRUE	0.752	-3.000	0.015	NA		NA
3751154	3751155	CMM_2194	CMM_2195		gcvP	FALSE	0.018	223.000	0.000	NA		NA
3751155	3751156	CMM_2195	CMM_2196	gcvP	gcvH	TRUE	0.942	-3.000	0.005	1.000	Y	NA
3751156	3751157	CMM_2196	CMM_2197	gcvH	gcvT	TRUE	0.983	-3.000	0.056	0.001	Y	NA
3751157	3751158	CMM_2197	gcvT	gcvT		FALSE	0.056	140.000	0.000	NA		NA
3751158	3751159	gcvT	CMM_2198			FALSE	0.050	149.000	0.000	NA		NA
3751162	3751163	CMM_2201	CMM_2202			TRUE	0.970	-3.000	0.249	1.000	N	NA
3751163	3751164	CMM_2202	CMM_2203			FALSE	0.147	80.000	0.000	1.000		NA
3751165	3751166	CMM_2204	CMM_2205			FALSE	0.057	160.000	0.000	1.000		NA
3751168	3751169	CMM_2207	CMM_2208			FALSE	0.120	59.000	0.000	NA		NA
3751171	3751172	CMM_2210	CMM_2211			FALSE	0.074	123.000	0.000	NA		NA
3751173	3751174	CMM_2212	CMM_2213			TRUE	0.984	4.000	0.667	1.000	N	NA
3751178	3751179	CMM_2217	CMM_2218	gabP		FALSE	0.256	51.000	0.000	NA	N	NA
3751179	3751180	CMM_2218	CMM_2219			TRUE	0.918	24.000	0.608	NA		NA
3751180	3751181	CMM_2219	CMM_2220			TRUE	0.990	0.000	0.810	NA		NA
3751181	3751182	CMM_2220	CMM_2221			FALSE	0.034	169.000	0.000	NA		NA
3751183	3751184	CMM_2222	CMM_2223			FALSE	0.033	170.000	0.000	NA		NA
3751185	3751186	CMM_2224	CMM_2225			FALSE	0.115	67.000	0.000	NA		NA
3751186	3751187	CMM_2225	CMM_2226		fbaA	FALSE	0.088	106.000	0.000	NA		NA
3751188	3751189	CMM_2227	CMM_2228		ispH	TRUE	0.589	-3.000	0.000	NA		NA
3751190	3751191	CMM_2229	CMM_2230	xseA	xseB	TRUE	0.985	11.000	0.412	0.001	Y	NA
3751191	3751192	CMM_2230	CMM_2231	xseB		TRUE	0.596	3.000	0.002	NA		NA
3751192	3751193	CMM_2231	CMM_2232		cynT	TRUE	0.889	-3.000	0.067	NA		NA
3751193	3751194	CMM_2232	CMM_2233	cynT	fumC	FALSE	0.485	82.000	0.058	1.000	N	NA
3751194	3751195	CMM_2233	CMM_2234	fumC		FALSE	0.194	32.000	0.000	NA		NA
3751196	3751197	CMM_2235	CMM_2236		uppS2	FALSE	0.120	228.000	0.058	1.000	N	NA
3751199	3751200	CMM_2238	CMM_2239			TRUE	0.940	62.000	0.455	0.059	Y	NA
3751200	3751201	CMM_2239	CMM_2240			TRUE	0.995	-3.000	0.556	0.059	Y	NA
3751201	3751202	CMM_2240	CMM_2241			FALSE	0.028	180.000	0.000	NA		NA
3751202	3751203	CMM_2241	CMM_2242			TRUE	0.629	0.000	0.000	NA		NA
3751204	3751205	CMM_2243	CMM_2244		greA	TRUE	0.712	61.000	0.292	NA		NA
3751206	3751207	CMM_2245	CMM_2246	ilvA		FALSE	0.273	105.000	0.041	NA		NA
3751209	3751210	CMM_2248	CMM_2249		bglL	FALSE	0.561	3.000	0.000	NA		NA
3751211	3751212	CMM_2250	CMM_2251			FALSE	0.063	133.000	0.000	NA		NA
3751213	3751214	CMM_2252	CMM_2253			FALSE	0.036	185.000	0.000	1.000		NA
3751214	3751215	CMM_2253	CMM_2254			FALSE	0.157	72.000	0.000	1.000		NA
3751215	3751216	CMM_2254	CMM_2255			TRUE	0.902	5.000	0.000	1.000	Y	NA
3751216	3751217	CMM_2255	CMM_2256			TRUE	0.674	-3.000	0.000	1.000		NA
3751217	3751218	CMM_2256	CMM_2257			TRUE	0.971	-3.000	0.333	1.000		NA
3751220	3751221	CMM_tRNA_0034	CMM_2259			FALSE	0.080	115.000	0.000	NA		NA
3751221	3751222	CMM_2259	CMM_2260			TRUE	0.863	38.000	0.348	1.000	N	NA
3751222	3751223	CMM_2260	CMM_2261			TRUE	0.766	-3.000	0.018	NA		NA
3751223	3751224	CMM_2261	CMM_2262			TRUE	0.935	-3.000	0.148	NA		NA
3751224	3751225	CMM_2262	CMM_2263		eno	FALSE	0.285	88.000	0.028	1.000		NA
3751225	3751226	CMM_2263	CMM_2264	eno	hisS	FALSE	0.195	117.000	0.000	1.000	N	NA
3751226	3751227	CMM_2264	CMM_2265	hisS		FALSE	0.372	13.000	0.000	1.000		NA
3751227	3751228	CMM_2265	CMM_2266			FALSE	0.064	155.000	0.000	1.000		NA
3751230	3751231	CMM_2268	CMM_2269	mfdA	pthA	TRUE	0.596	89.000	0.137	1.000	N	NA
3751231	3751232	CMM_2269	CMM_2270	pthA	rplY	TRUE	0.888	141.000	0.496	0.024	Y	NA
3751232	3751233	CMM_2270	CMM_2271	rplY		FALSE	0.046	171.000	0.000	1.000		NA
3751234	3751235	CMM_2272	CMM_2273	gndA2		FALSE	0.143	70.000	0.005	NA		NA
3751236	3751237	CMM_2274	CMM_2275	prsA	glmU	FALSE	0.542	15.000	0.005	1.000	N	NA
3751237	3751238	CMM_2275	CMM_tRNA_0035	glmU		FALSE	0.134	49.000	0.000	NA		NA
3751240	3751241	CMM_2277	CMM_2278			TRUE	0.577	11.000	0.000	1.000	N	NA
3751241	3751242	CMM_2278	CMM_2279			TRUE	0.648	3.000	0.000	1.000		NA
3751244	3751245	CMM_2281	CMM_2282			TRUE	0.965	2.000	0.047	1.000	Y	NA
3751245	3751246	CMM_2282	CMM_2283			TRUE	0.930	-3.000	0.000	NA	Y	NA
3751250	3751251	CMM_2287	CMM_2288			FALSE	0.540	-7.000	0.000	NA		NA
3751251	3751252	CMM_2288	CMM_2289			FALSE	0.050	148.000	0.000	NA		NA
3751254	3751255	CMM_2291	CMM_2292			FALSE	0.141	46.000	0.000	NA		NA
3751256	3751257	CMM_2293	CMM_2294			TRUE	0.589	-3.000	0.000	NA		NA
3751257	3751258	CMM_2294	CMM_2295			FALSE	0.005	591.000	0.000	NA		NA
3751260	3751261	CMM_2297	CMM_2298			TRUE	0.589	-3.000	0.000	NA		NA
3751261	3751262	CMM_2298	CMM_2299			FALSE	0.530	-16.000	0.000	NA		NA
3751262	3751263	CMM_2299	CMM_2300			FALSE	0.068	129.000	0.000	NA		NA
3751263	3751264	CMM_2300	CMM_2301			FALSE	0.004	1643.000	0.000	NA		NA
3751265	3751266	CMM_2302	CMM_2303			FALSE	0.011	291.000	0.000	NA		NA
3751266	3751267	CMM_2303	CMM_2304			FALSE	0.081	114.000	0.000	NA		NA
3751267	3751268	CMM_2304	CMM_PS_20			FALSE	0.047	152.000	0.000	NA		NA
3751269	3751270	CMM_2305	CMM_2306			FALSE	0.037	164.000	0.000	NA		NA
3751270	3751271	CMM_2306	CMM_2307			FALSE	0.051	147.000	0.000	NA		NA
3751271	3751272	CMM_2307	CMM_2308			TRUE	0.589	-3.000	0.000	NA		NA
3751273	3751274	CMM_2309	CMM_2310			TRUE	0.952	-3.000	0.212	NA		NA
3751274	3751275	CMM_2310	CMM_PS_21			FALSE	0.120	59.000	0.000	NA		NA
3751275	3751276	CMM_PS_21	CMM_2311		moaE	FALSE	0.004	1206.000	0.000	NA		NA
3751276	3751277	CMM_2311	CMM_2312	moaE	moaB	TRUE	0.973	-3.000	0.013	0.002	Y	NA
3751277	3751278	CMM_2312	CMM_2313	moaB	moaC	TRUE	0.974	-3.000	0.014	0.002	Y	NA
3751278	3751279	CMM_2313	CMM_2314	moaC	moaA1	TRUE	0.969	-7.000	0.019	0.002	Y	NA
3751280	3751281	CMM_2315	CMM_2316			FALSE	0.091	98.000	0.000	NA		NA
3751281	3751282	CMM_2316	CMM_2317			FALSE	0.212	110.000	0.000	1.000	N	NA
3751282	3751283	CMM_2317	CMM_2318		galE3	TRUE	0.826	-3.000	0.005	1.000	N	NA
3751283	3751284	CMM_2318	CMM_2319	galE3		FALSE	0.075	121.000	0.000	NA		NA
3751285	3751286	CMM_2320	CMM_2321			FALSE	0.109	78.000	0.000	NA		NA
3751286	3751287	CMM_2321	CMM_2322			FALSE	0.085	111.000	0.000	NA		NA
3751287	3751288	CMM_2322	CMM_2323			FALSE	0.123	57.000	0.000	NA		NA
3751289	3751290	CMM_2324	CMM_2325			TRUE	0.589	-3.000	0.000	NA		NA
3751290	3751291	CMM_2325	CMM_2326			FALSE	0.011	286.000	0.000	NA		NA
3751291	3751292	CMM_2326	CMM_2327			FALSE	0.532	-13.000	0.000	NA		NA
3751292	3751293	CMM_2327	CMM_2328			FALSE	0.396	8.000	0.000	NA		NA
3751293	3751294	CMM_2328	CMM_2329			FALSE	0.198	31.000	0.000	NA		NA
3751297	3751298	CMM_2332	CMM_2333			FALSE	0.078	117.000	0.000	NA		NA
3751298	3751299	CMM_2333	CMM_2334			TRUE	0.833	-3.000	0.026	1.000		NA
3751299	3751300	CMM_2334	CMM_2335			TRUE	0.984	-3.000	0.191	1.000	Y	NA
3751301	3751302	CMM_2336	CMM_2337			TRUE	0.922	-3.000	0.109	NA		NA
3751302	3751303	CMM_2337	CMM_2338			TRUE	0.907	-3.000	0.083	NA		NA
3751304	3751305	CMM_2339	CMM_2340			TRUE	0.973	0.000	0.333	NA		NA
3751307	3751308	CMM_2342	CMM_2343	modC	modB	TRUE	0.982	-3.000	0.450	1.000	N	NA
3751308	3751309	CMM_2343	CMM_2344	modB	modA	TRUE	0.990	-10.000	0.578	0.001	N	NA
3751309	3751310	CMM_2344	CMM_2345	modA		TRUE	0.829	0.000	0.000	1.000	N	NA
3751311	3751312	CMM_2346	CMM_2347	moaA	moaD	TRUE	0.915	14.000	0.410	1.000		NA
3751312	3751313	CMM_2347	CMM_2348	moaD		FALSE	0.227	24.000	0.000	NA		NA
3751313	3751314	CMM_2348	CMM_2349		fecB1	TRUE	0.898	70.000	0.400	NA	Y	NA
3751314	3751315	CMM_2349	CMM_2350	fecB1	fecC1	TRUE	0.937	-3.000	0.000	1.000	Y	NA
3751315	3751316	CMM_2350	CMM_2351	fecC1	fecD1	TRUE	0.960	-3.000	0.000	0.058	Y	NA
3751317	3751318	CMM_2352	CMM_2353			FALSE	0.086	110.000	0.000	NA		NA
3751318	3751319	CMM_2353	CMM_2354			TRUE	0.941	-3.000	0.167	NA		NA
3751319	3751320	CMM_2354	CMM_2355			TRUE	0.737	47.000	0.000	0.041	Y	NA
3751320	3751321	CMM_2355	CMM_2356			TRUE	0.918	-21.000	0.125	1.000		NA
3751321	3751322	CMM_2356	CMM_2357			FALSE	0.097	128.000	0.000	1.000		NA
3751322	3751323	CMM_2357	CMM_2358			TRUE	0.629	0.000	0.000	NA		NA
3751323	3751324	CMM_2358	CMM_2359			FALSE	0.078	117.000	0.000	NA		NA
3751332	3751333	CMM_PS_22	CMM_2367		ispE	FALSE	0.208	28.000	0.000	NA		NA
3751333	3751334	CMM_2367	CMM_2368	ispE	ksgA	TRUE	0.812	11.000	0.068	1.000	N	NA
3751334	3751335	CMM_2368	CMM_2369	ksgA		TRUE	0.848	-3.000	0.018	NA	N	NA
3751335	3751336	CMM_2369	CMM_2370		metS	TRUE	0.709	72.000	0.221	NA	N	NA
3751336	3751337	CMM_2370	CMM_2371	metS	gltA1	FALSE	0.460	63.000	0.000	0.033	N	NA
3751338	3751339	CMM_2372	CMM_2373			FALSE	0.500	35.000	0.000	0.029		NA
3751343	3751344	CMM_2377	CMM_2378			TRUE	0.984	-3.000	0.618	1.000		NA
3751345	3751346	CMM_2379	CMM_2380	prpB	prpD	TRUE	0.964	0.000	0.218	1.000		NA
3751347	3751348	CMM_2381	CMM_2382			FALSE	0.004	925.000	0.000	NA		NA
3751350	3751351	CMM_2384	CMM_2385			TRUE	0.938	-3.000	0.138	1.000		NA
3751351	3751352	CMM_2385	CMM_2386			FALSE	0.018	269.000	0.000	1.000		NA
3751352	3751353	CMM_2386	CMM_2387			FALSE	0.379	9.000	0.000	NA		NA
3751353	3751354	CMM_2387	CMM_2388			FALSE	0.108	79.000	0.000	NA		NA
3751357	3751358	CMM_2391	CMM_2392			TRUE	0.589	-3.000	0.000	NA		NA
3751362	3751363	CMM_2396	CMM_2397			TRUE	0.595	2.000	0.000	NA		NA
3751364	3751365	CMM_2398	CMM_2399			TRUE	0.629	0.000	0.000	NA		NA
3751365	3751366	CMM_2399	CMM_2400			FALSE	0.090	101.000	0.000	NA		NA
3751366	3751367	CMM_2400	CMM_2401			TRUE	0.782	-3.000	0.021	NA		NA
3751369	3751370	CMM_2403	CMM_2404			FALSE	0.094	91.000	0.000	NA		NA
3751370	3751371	CMM_2404	CMM_2405		sdaA	FALSE	0.356	10.000	0.000	NA		NA
3751371	3751372	CMM_2405	CMM_2406	sdaA		FALSE	0.169	38.000	0.000	NA		NA
3751373	3751374	CMM_2407	CMM_2408			TRUE	0.589	-3.000	0.000	NA		NA
3751374	3751375	CMM_2408	CMM_2409			TRUE	0.982	-3.000	0.455	1.000	N	NA
3751376	3751377	CMM_2410	CMM_2411			TRUE	0.996	-3.000	0.611	0.057	Y	NA
3751377	3751378	CMM_2411	CMM_2412			TRUE	0.996	-3.000	0.611	0.057	Y	NA
3751378	3751379	CMM_2412	CMM_2413			TRUE	0.944	5.000	0.200	1.000	N	NA
3751379	3751380	CMM_2413	CMM_2414			TRUE	0.992	0.000	0.273	0.063	Y	NA
3751381	3751382	CMM_2415	CMM_2416		corA2	FALSE	0.296	52.000	0.000	1.000	N	NA
3751382	3751383	CMM_2416	CMM_2417	corA2		FALSE	0.185	48.000	0.000	1.000		NA
3751383	3751384	CMM_2417	CMM_2418		fadD	TRUE	0.674	-3.000	0.000	1.000		NA
3751385	3751386	CMM_2419	CMM_2420			FALSE	0.066	191.000	0.000	1.000	N	NA
3751386	3751387	CMM_2420	CMM_2421			TRUE	0.993	-3.000	0.333	0.057	Y	NA
3751387	3751388	CMM_2421	CMM_2422			TRUE	0.998	-3.000	0.909	0.057	Y	NA
3751388	3751389	CMM_2422	CMM_2423			TRUE	0.987	-3.000	0.727	1.000		NA
3751390	3751391	CMM_2424	CMM_2425			TRUE	0.589	-3.000	0.000	NA		NA
3751391	3751392	CMM_2425	CMM_2426		sseB	FALSE	0.004	991.000	0.000	NA		NA
3751392	3751393	CMM_2426	CMM_2427	sseB		FALSE	0.270	29.000	0.000	1.000		NA
3751393	3751394	CMM_2427	CMM_2428		nrdF	FALSE	0.087	135.000	0.000	1.000		NA
3751394	3751395	CMM_2428	CMM_2429	nrdF	nrdA	TRUE	0.578	172.000	0.064	0.001	Y	NA
3751396	3751397	CMM_2430	CMM_2431			FALSE	0.091	96.000	0.000	NA		NA
3751398	3751399	CMM_2432	CMM_2433			FALSE	0.356	10.000	0.000	NA		NA
3751401	3751402	CMM_2435	CMM_2436	abfA2		TRUE	0.904	95.000	0.333	0.057	Y	NA
3751402	3751403	CMM_2436	CMM_2437			TRUE	0.993	-3.000	0.333	0.057	Y	NA
3751403	3751404	CMM_2437	CMM_2438			TRUE	0.969	95.000	1.000	0.057	Y	NA
3751404	3751405	CMM_2438	CMM_2439			TRUE	0.807	105.000	0.500	1.000	N	NA
3751407	3751408	CMM_2441	CMM_2442			FALSE	0.356	10.000	0.000	NA		NA
3751408	3751409	CMM_2442	CMM_2443		celB	FALSE	0.152	77.000	0.000	1.000		NA
3751409	3751410	CMM_2443	CMM_tRNA_0036	celB		FALSE	0.089	103.000	0.000	NA		NA
3751410	3751411	CMM_tRNA_0036	CMM_2444			FALSE	0.040	160.000	0.000	NA		NA
3751411	3751412	CMM_2444	CMM_2445			FALSE	0.281	87.000	0.037	NA		NA
3751412	3751413	CMM_2445	CMM_2446		galU	FALSE	0.419	58.000	0.024	1.000	N	NA
3751414	3751415	CMM_2447	CMM_2448			TRUE	0.766	7.000	0.041	1.000		NA
3751415	3751416	CMM_2448	CMM_2449			FALSE	0.339	29.000	0.007	1.000		NA
3751418	3751419	CMM_tRNA_0037	CMM_2452			FALSE	0.162	40.000	0.000	NA		NA
3751419	3751420	CMM_2452	CMM_2453			TRUE	0.629	0.000	0.000	NA		NA
3751422	3751423	CMM_2455	CMM_2456			TRUE	0.981	-3.000	0.417	1.000	N	NA
3751423	3751424	CMM_2456	CMM_2457			TRUE	0.979	-7.000	0.600	1.000		NA
3751424	3751425	CMM_2457	CMM_2458			FALSE	0.213	27.000	0.000	NA		NA
3751425	3751426	CMM_2458	CMM_2459			TRUE	0.978	-3.000	0.500	NA		NA
3751428	3751429	CMM_2461	CMM_2462			FALSE	0.009	358.000	0.000	NA		NA
3751429	3751430	CMM_2462	CMM_2463			FALSE	0.019	221.000	0.000	NA		NA
3751430	3751431	CMM_2463	CMM_2464			FALSE	0.023	234.000	0.000	1.000		NA
3751432	3751433	CMM_2465	CMM_2466			FALSE	0.387	35.000	0.000	1.000	N	NA
3751433	3751434	CMM_2466	CMM_2467			FALSE	0.019	360.000	0.000	NA	N	NA
3751434	3751435	CMM_2467	CMM_2468		dtxR	FALSE	0.022	324.000	0.000	NA	N	NA
3751437	3751438	CMM_2470	CMM_2471		cspB	TRUE	0.958	-7.000	0.317	NA		NA
3751439	3751440	CMM_2472	CMM_2473			TRUE	0.639	11.000	0.038	NA		NA
3751440	3751441	CMM_2473	CMM_2474			TRUE	0.951	-3.000	0.206	NA		NA
3751441	3751442	CMM_2474	CMM_2475			TRUE	0.741	78.000	0.020	0.032	Y	NA
3751442	3751443	CMM_2475	CMM_2476			TRUE	0.933	121.000	0.824	1.000	Y	NA
3751443	3751444	CMM_2476	CMM_2477			FALSE	0.406	47.000	0.048	NA		NA
3751445	3751446	CMM_2478	CMM_2479	groEL	cspA2	FALSE	0.067	190.000	0.000	1.000	N	NA
3751446	3751447	CMM_2479	CMM_2480	cspA2		FALSE	0.019	221.000	0.000	NA		NA
3751447	3751448	CMM_2480	CMM_2481			FALSE	0.454	35.000	0.039	NA		NA
3751449	3751450	CMM_2482	CMM_2483			TRUE	0.726	6.000	0.006	1.000	N	NA
3751451	3751452	CMM_tRNA_0038	CMM_2484			FALSE	0.155	42.000	0.000	NA		NA
3751453	3751454	CMM_2485	CMM_2486			TRUE	0.704	102.000	0.233	0.088		NA
3751455	3751456	CMM_2487	CMM_2488		cysS	TRUE	0.969	-10.000	0.088	1.000	Y	NA
3751456	3751457	CMM_2488	CMM_2489	cysS	ispDF	FALSE	0.281	84.000	0.007	1.000	N	NA
3751457	3751458	CMM_2489	CMM_2490	ispDF		TRUE	0.612	44.000	0.068	1.000	N	NA
3751460	3751461	CMM_2492	CMM_2493			TRUE	0.991	-3.000	0.437	1.000	Y	NA
3751465	3751466	CMM_2497	CMM_2498			TRUE	0.667	-16.000	0.011	NA		NA
3751466	3751467	CMM_2498	CMM_2499			TRUE	0.693	-10.000	0.013	NA		NA
3751467	3751468	CMM_2499	CMM_2499A			TRUE	0.852	12.000	0.200	NA		NA
3751468	3751469	CMM_2499A	CMM_2500			FALSE	0.147	44.000	0.000	NA		NA
3751470	3751471	CMM_2501	CMM_2502	glnR		TRUE	0.889	-37.000	0.076	1.000		NA
3751471	3751472	CMM_2502	CMM_2503		ppkA	FALSE	0.260	94.000	0.026	1.000		NA
3751472	3751473	CMM_2503	CMM_2504	ppkA		FALSE	0.396	42.000	0.007	1.000	N	NA
3751473	3751474	CMM_2504	CMM_2505		pstS	FALSE	0.119	200.000	0.000	0.057	N	NA
3751474	3751475	CMM_2505	CMM_2506	pstS	pstC	TRUE	0.940	108.000	0.529	0.002	Y	NA
3751475	3751476	CMM_2506	CMM_2507	pstC	pstA	TRUE	0.991	0.000	0.172	0.002	Y	NA
3751476	3751477	CMM_2507	CMM_2508	pstA	pstB	TRUE	0.955	44.000	0.373	0.002	Y	NA
3751478	3751479	CMM_2509	CMM_2510		sigK	TRUE	0.991	-3.000	1.000	NA		NA
3751479	3751480	CMM_2510	CMM_2511	sigK		FALSE	0.006	568.000	0.000	NA		NA
3751486	3751487	CMM_2516	CMM_2517			TRUE	0.833	11.000	0.000	1.000	Y	NA
3751488	3751489	CMM_2518	CMM_2519	galT	galK	TRUE	0.988	-3.000	0.370	0.001	N	NA
3751489	3751490	CMM_2519	CMM_2520	galK		FALSE	0.157	73.000	0.000	1.000		NA
3751491	3751492	CMM_2521	CMM_2522	folD	glyA	TRUE	0.963	-3.000	0.187	1.000	N	NA
3751493	3751494	CMM_2523	CMM_2524			FALSE	0.158	41.000	0.000	NA		NA
3751499	3751500	CMM_2529	CMM_2530	mntH		FALSE	0.068	129.000	0.000	NA		NA
3751500	3751501	CMM_2530	CMM_2531			FALSE	0.120	59.000	0.000	NA		NA
3751503	3751504	CMM_2533	CMM_2534			TRUE	0.994	-3.000	0.500	0.088	Y	NA
3751504	3751505	CMM_2534	CMM_2535		sbtB	FALSE	0.089	133.000	0.000	1.000		NA
3751505	3751506	CMM_2535	CMM_2536	sbtB	sbtC	FALSE	0.085	247.000	0.000	0.001		NA
3751506	3751507	CMM_2536	CMM_2537	sbtC	icdA	FALSE	0.021	250.000	0.000	1.000		NA
3751508	3751509	CMM_2538	CMM_2539			TRUE	0.746	4.000	0.019	1.000		NA
3751509	3751510	CMM_2539	CMM_2540			FALSE	0.249	55.000	0.019	NA		NA
3751511	3751512	CMM_2541	CMM_2542			TRUE	0.966	-3.000	0.000	0.006	Y	NA
3751512	3751513	CMM_2542	CMM_2543		ddaH	FALSE	0.015	578.000	0.000	1.000	N	NA
3751513	3751514	CMM_2543	CMM_RNA_0002	ddaH		FALSE	0.005	633.000	0.000	NA		NA
3751514	3751515	CMM_RNA_0002	CMM_rRNA_0003			FALSE	0.085	111.000	0.000	NA		NA
3751515	3751516	CMM_rRNA_0003	CMM_RNA_0002a			FALSE	0.007	418.000	0.000	NA		NA
3751516	3751517	CMM_RNA_0002a	CMM_2544		purH	FALSE	0.005	574.000	0.000	NA		NA
3751517	3751518	CMM_2544	CMM_2545	purH	purN	TRUE	0.937	-3.000	0.000	1.000	Y	NA
3751518	3751519	CMM_2545	CMM_2546	purN		FALSE	0.505	4.000	0.000	NA		NA
3751519	3751520	CMM_2546	CMM_2547		sucD	FALSE	0.039	161.000	0.000	NA		NA
3751520	3751521	CMM_2547	CMM_2548	sucD	sucC	TRUE	0.972	28.000	0.382	0.001	Y	NA
3751522	3751523	CMM_2549	CMM_2550			FALSE	0.089	103.000	0.000	NA		NA
3751524	3751525	CMM_2551	CMM_2552	uvrD1	glpQ1	FALSE	0.246	100.000	0.005	1.000	N	NA
3751527	3751528	CMM_2554	CMM_2555	guaA		TRUE	0.730	-3.000	0.013	NA		NA
3751528	3751529	CMM_2555	CMM_2556			TRUE	0.878	10.000	0.198	NA		NA
3751529	3751530	CMM_2556	CMM_2557		napA	TRUE	0.897	0.000	0.061	NA		NA
3751530	3751531	CMM_2557	CMM_2558	napA		TRUE	0.983	4.000	0.286	1.000	Y	NA
3751531	3751532	CMM_2558	CMM_2559		guaB1	FALSE	0.219	102.000	0.000	1.000	N	NA
3751532	3751533	CMM_2559	CMM_2560	guaB1		FALSE	0.540	-7.000	0.000	NA		NA
3751533	3751534	CMM_2560	CMM_2561		guaB2	FALSE	0.036	166.000	0.000	NA		NA
3751535	3751536	CMM_2562	CMM_2563	livH	livM	TRUE	0.990	7.000	0.528	0.056	Y	NA
3751536	3751537	CMM_2563	CMM_2564	livM	livG	TRUE	0.988	-7.000	0.361	1.000	Y	NA
3751537	3751538	CMM_2564	CMM_2565	livG	livF	TRUE	0.996	-3.000	0.582	0.024	Y	NA
3751539	3751540	CMM_2566	CMM_2567	livK		FALSE	0.029	179.000	0.000	NA		NA
3751540	3751541	CMM_2567	CMM_2568		groES	FALSE	0.056	161.000	0.000	1.000		NA
3751543	3751544	CMM_2570	CMM_2571			FALSE	0.095	105.000	0.002	NA		NA
3751544	3751545	CMM_2571	CMM_2572			TRUE	0.974	-3.000	0.012	0.001	Y	NA
3751545	3751546	CMM_2572	CMM_2573		alrA2	TRUE	0.634	10.000	0.003	1.000	N	NA
3751546	3751547	CMM_2573	CMM_2574	alrA2	alrA1	TRUE	0.969	-3.000	0.000	0.001	Y	NA
3751547	3751548	CMM_2574	CMM_2575	alrA1	acpS	TRUE	0.872	-3.000	0.021	1.000	N	NA
3751548	3751549	CMM_2575	CMM_2576	acpS	glmS	TRUE	0.776	11.000	0.048	1.000	N	NA
3751551	3751552	CMM_2578	CMM_2579		rpsI	TRUE	0.728	24.000	0.068	1.000	N	NA
3751552	3751553	CMM_2579	CMM_2580	rpsI	rplM	TRUE	0.962	51.000	0.601	0.015	Y	NA
3751553	3751554	CMM_2580	CMM_2581	rplM	truA	FALSE	0.512	152.000	0.058	1.000	Y	NA
3751554	3751555	CMM_2581	CMM_2582	truA		TRUE	0.674	-3.000	0.000	1.000		NA
3751555	3751556	CMM_2582	CMM_2583		rplQ	FALSE	0.102	125.000	0.000	1.000		NA
3751556	3751557	CMM_2583	CMM_2584	rplQ	rpoA	TRUE	0.931	53.000	0.873	1.000	N	NA
3751557	3751558	CMM_2584	CMM_2585	rpoA	rpsK	FALSE	0.526	162.000	0.308	1.000	N	NA
3751558	3751559	CMM_2585	CMM_2586	rpsK	rpsM	TRUE	0.978	45.000	0.810	0.015	Y	NA
3751559	3751560	CMM_2586	CMM_2587	rpsM	rpmJ	FALSE	0.549	154.000	0.194	0.015		NA
3751560	3751561	CMM_2587	CMM_2588	rpmJ	infA	TRUE	0.699	73.000	0.257	1.000		NA
3751561	3751562	CMM_2588	CMM_2589	infA	mtlD	FALSE	0.043	242.000	0.000	1.000	N	NA
3751562	3751563	CMM_2589	CMM_2590	mtlD	mtlF	TRUE	0.953	-3.000	0.019	1.000	Y	NA
3751563	3751564	CMM_2590	CMM_2591	mtlF	mtlA	TRUE	0.730	108.000	0.025	0.003	Y	NA
3751564	3751565	CMM_2591	CMM_2592	mtlA		TRUE	0.693	113.000	0.016	0.005	Y	NA
3751565	3751566	CMM_2592	CMM_2593			TRUE	0.993	-3.000	0.286	0.005	Y	NA
3751566	3751567	CMM_2593	CMM_2594			TRUE	0.663	99.000	0.000	0.005	Y	NA
3751569	3751570	CMM_2596	CMM_2597	mapA2	adk	TRUE	0.978	5.000	0.606	1.000	N	NA
3751570	3751571	CMM_2597	CMM_2598	adk	secY	TRUE	0.920	-3.000	0.057	1.000	N	NA
3751571	3751572	CMM_2598	CMM_2599	secY	rplO	TRUE	0.839	126.000	0.730	1.000	N	NA
3751572	3751573	CMM_2599	CMM_2600	rplO	rpmD	TRUE	0.997	0.000	0.653	0.002	Y	NA
3751573	3751574	CMM_2600	CMM_2601	rpmD	rpsE	TRUE	0.998	0.000	0.789	0.020	Y	NA
3751574	3751575	CMM_2601	CMM_2602	rpsE	rplR	TRUE	0.982	36.000	0.814	0.020	Y	NA
3751575	3751576	CMM_2602	CMM_2603	rplR	rplF	TRUE	0.997	3.000	0.815	0.015	Y	NA
3751576	3751577	CMM_2603	CMM_2604	rplF	rpsH	TRUE	0.996	5.000	0.808	0.015	Y	NA
3751577	3751578	CMM_2604	CMM_2605	rpsH	rplE	TRUE	0.690	138.000	0.059	0.015	Y	NA
3751578	3751579	CMM_2605	CMM_2606	rplE	rplX	TRUE	0.997	3.000	0.758	0.015	Y	NA
3751579	3751580	CMM_2606	CMM_2607	rplX	rplN	TRUE	0.997	3.000	0.810	0.020	Y	NA
3751580	3751581	CMM_2607	CMM_2608	rplN	rpsQ	TRUE	0.984	28.000	0.791	0.020	Y	NA
3751581	3751582	CMM_2608	CMM_2609	rpsQ	rpmC	TRUE	0.997	3.000	0.828	0.015	Y	NA
3751582	3751583	CMM_2609	CMM_2610	rpmC	rplP	TRUE	0.998	0.000	0.802	0.015	Y	NA
3751583	3751584	CMM_2610	CMM_2611	rplP	rpsC	TRUE	0.997	3.000	0.828	0.020	Y	NA
3751584	3751585	CMM_2611	CMM_2612	rpsC	rplV	TRUE	0.997	0.000	0.719	0.020	Y	NA
3751585	3751586	CMM_2612	CMM_2613	rplV	rpsS	TRUE	0.985	26.000	0.769	0.020	Y	NA
3751586	3751587	CMM_2613	CMM_2614	rpsS	rplB	TRUE	0.991	13.000	0.820	0.020	Y	NA
3751587	3751588	CMM_2614	CMM_2615	rplB	rplW	TRUE	0.982	23.000	0.849	1.000	Y	NA
3751588	3751589	CMM_2615	CMM_2616	rplW	rplD	TRUE	0.993	-3.000	0.513	1.000	Y	NA
3751589	3751590	CMM_2616	CMM_2617	rplD	rplC	TRUE	0.993	3.000	0.361	0.015	Y	NA
3751590	3751591	CMM_2617	CMM_2618	rplC	rpsJ	TRUE	0.988	9.000	0.467	0.020	Y	NA
3751591	3751592	CMM_2618	CMM_2619	rpsJ		FALSE	0.019	441.000	0.000	1.000	N	NA
3751592	3751593	CMM_2619	CMM_2620		tufA	FALSE	0.128	150.000	0.000	1.000	N	NA
3751593	3751594	CMM_2620	CMM_2621	tufA	fusA	TRUE	0.923	114.000	0.400	0.001	Y	NA
3751594	3751595	CMM_2621	CMM_2622	fusA	rpsG	TRUE	0.941	48.000	0.579	1.000	Y	NA
3751595	3751596	CMM_2622	CMM_2623	rpsG	rpsL	TRUE	0.997	0.000	0.620	0.003	Y	NA
3751596	3751597	CMM_2623	CMM_2624	rpsL		FALSE	0.013	266.000	0.000	NA		NA
3751597	3751598	CMM_2624	CMM_2625			FALSE	0.246	20.000	0.000	NA		NA
3751598	3751599	CMM_2625	CMM_2626			FALSE	0.113	74.000	0.000	NA		NA
3751599	3751600	CMM_2626	CMM_2627			TRUE	0.990	-13.000	0.481	1.000	Y	NA
3751600	3751601	CMM_2627	CMM_2628			TRUE	0.962	45.000	0.594	0.056	Y	NA
3751601	3751602	CMM_2628	CMM_2629			FALSE	0.020	209.000	0.000	NA		NA
3751602	3751603	CMM_2629	CMM_2630		rpoC	FALSE	0.026	183.000	0.000	NA		NA
3751603	3751604	CMM_2630	CMM_2631	rpoC	rpoB	TRUE	0.980	49.000	0.851	0.001	Y	NA
3751605	3751606	CMM_2632	CMM_2633			FALSE	0.128	53.000	0.000	NA		NA
3751606	3751607	CMM_2633	CMM_2634			FALSE	0.302	41.000	0.000	NA	N	NA
3751607	3751608	CMM_2634	CMM_2635			FALSE	0.159	65.000	0.000	1.000		NA
3751608	3751609	CMM_2635	CMM_2636			FALSE	0.231	37.000	0.000	1.000		NA
3751609	3751610	CMM_2636	CMM_2637			TRUE	0.941	-3.000	0.167	NA		NA
3751611	3751612	CMM_2638	CMM_2639			FALSE	0.081	114.000	0.000	NA		NA
3751612	3751613	CMM_2639	CMM_2640			FALSE	0.530	-16.000	0.000	NA		NA
3751616	3751617	CMM_2643	CMM_2644			FALSE	0.087	108.000	0.000	NA		NA
3751617	3751618	CMM_2644	CMM_2645			FALSE	0.040	180.000	0.000	1.000		NA
3751620	3751621	CMM_2647	CMM_2648			FALSE	0.105	81.000	0.000	NA		NA
3751621	3751622	CMM_2648	CMM_2649			TRUE	0.866	28.000	0.352	1.000		NA
3751625	3751626	CMM_2652	CMM_2653			FALSE	0.020	211.000	0.000	NA		NA
3751627	3751628	CMM_2654	CMM_2655			FALSE	0.115	65.000	0.000	NA		NA
3751628	3751629	CMM_2655	CMM_2656			FALSE	0.165	116.000	0.000	NA	N	NA
3751630	3751631	CMM_2657	CMM_2658			FALSE	0.133	89.000	0.000	1.000		NA
3751631	3751632	CMM_2658	CMM_2659			TRUE	0.803	-3.000	0.000	1.000	N	NA
3751633	3751634	CMM_2660	CMM_2661			FALSE	0.033	170.000	0.000	NA		NA
3751635	3751636	CMM_2662	CMM_2663			FALSE	0.273	120.000	0.000	0.028		NA
3751636	3751637	CMM_2663	CMM_2664			TRUE	0.589	-3.000	0.000	NA		NA
3751643	3751644	CMM_PS_23	CMM_2670			FALSE	0.417	7.000	0.000	NA		NA
3751644	3751645	CMM_2670	CMM_2671			TRUE	0.629	0.000	0.000	NA		NA
3751646	3751647	CMM_2672	CMM_2673			FALSE	0.005	607.000	0.000	NA		NA
3751648	3751649	CMM_2674	CMM_2675			FALSE	0.115	68.000	0.000	NA		NA
3751654	3751655	CMM_2680	CMM_2681			FALSE	0.116	64.000	0.000	NA		NA
3751655	3751656	CMM_2681	CMM_2682			FALSE	0.544	-6.000	0.000	NA		NA
3751656	3751657	CMM_2682	CMM_2683			FALSE	0.095	90.000	0.000	NA		NA
3751657	3751658	CMM_2683	CMM_2684			TRUE	0.914	9.000	0.244	1.000		NA
3751658	3751659	CMM_2684	CMM_2685			TRUE	0.962	-3.000	0.111	0.014		NA
3751659	3751660	CMM_2685	CMM_2686			TRUE	0.965	-3.000	0.000	0.014	Y	NA
3751660	3751661	CMM_2686	CMM_2687			TRUE	0.650	73.000	0.196	1.000		NA
3751662	3751663	CMM_2688	CMM_2689			FALSE	0.005	625.000	0.000	NA		NA
3751663	3751664	CMM_2689	CMM_2690			FALSE	0.092	93.000	0.000	NA		NA
3751665	3751666	CMM_2691	CMM_2692			TRUE	0.661	113.000	0.000	0.001	Y	NA
3751666	3751667	CMM_2692	CMM_2693			FALSE	0.073	125.000	0.000	NA		NA
3751667	3751668	CMM_2693	CMM_2694			FALSE	0.024	192.000	0.000	NA		NA
3751669	3751670	CMM_2695	CMM_2696			FALSE	0.238	86.000	0.000	1.000	N	NA
3751671	3751672	CMM_2697	CMM_2698			TRUE	0.956	3.000	0.000	0.056	Y	NA
3751672	3751673	CMM_2698	CMM_2699			TRUE	0.692	62.000	0.000	0.056	Y	NA
3751673	3751674	CMM_2699	CMM_2700		bgaB	TRUE	0.849	82.000	0.231	1.000	Y	NA
3751674	3751675	CMM_2700	CMM_2701	bgaB		FALSE	0.216	106.000	0.000	1.000	N	NA
3751675	3751676	CMM_2701	CMM_2702			TRUE	0.940	-3.000	0.088	1.000	N	NA
3751676	3751677	CMM_2702	CMM_2703			FALSE	0.347	90.000	0.059	NA		NA
3751680	3751681	CMM_2706	CMM_2707			FALSE	0.505	4.000	0.000	NA		NA
3751681	3751682	CMM_2707	CMM_2708			FALSE	0.031	173.000	0.000	NA		NA
3751682	3751683	CMM_2708	CMM_2709			FALSE	0.163	60.000	0.000	1.000		NA
3751683	3751684	CMM_2709	CMM_2710			TRUE	0.589	-3.000	0.000	NA		NA
3751684	3751685	CMM_2710	CMM_2711			TRUE	0.629	0.000	0.000	NA		NA
3751686	3751687	CMM_2712	CMM_2713			FALSE	0.223	25.000	0.000	NA		NA
3751687	3751688	CMM_2713	CMM_2714			FALSE	0.117	62.000	0.000	NA		NA
3751688	3751689	CMM_2714	CMM_2715			TRUE	0.595	2.000	0.000	NA		NA
3751689	3751690	CMM_2715	CMM_2716			TRUE	0.896	13.000	0.333	NA		NA
3751690	3751691	CMM_2716	CMM_2717			FALSE	0.125	55.000	0.000	NA		NA
3751691	3751692	CMM_2717	CMM_2718			TRUE	0.589	-3.000	0.000	NA		NA
3751692	3751693	CMM_2718	CMM_2719			TRUE	0.589	-3.000	0.000	NA		NA
3751693	3751694	CMM_2719	CMM_2720			TRUE	0.589	-3.000	0.000	NA		NA
3751695	3751696	CMM_2721	CMM_2722			FALSE	0.513	154.000	0.000	0.001	Y	NA
3751696	3751697	CMM_2722	CMM_2723			TRUE	0.946	0.000	0.000	1.000	Y	NA
3751697	3751698	CMM_2723	CMM_2724			TRUE	0.924	-7.000	0.000	1.000	Y	NA
3751703	3751704	CMM_2729	CMM_2730			FALSE	0.034	169.000	0.000	NA		NA
3751704	3751705	CMM_2730	CMM_2731			TRUE	0.997	0.000	0.667	0.055	Y	NA
3751706	3751707	CMM_2732	CMM_2733			FALSE	0.177	127.000	0.000	1.000	N	NA
3751707	3751708	CMM_2733	CMM_2734			FALSE	0.220	100.000	0.000	1.000	N	NA
3751708	3751709	CMM_2734	CMM_2735		glpX	FALSE	0.539	13.000	0.000	1.000	N	NA
3751709	3751710	CMM_2735	CMM_2736	glpX		FALSE	0.120	59.000	0.000	NA		NA
3751710	3751711	CMM_2736	CMM_2737			FALSE	0.025	189.000	0.000	NA		NA
3751711	3751712	CMM_2737	CMM_2738			TRUE	0.674	-3.000	0.000	1.000		NA
3751713	3751714	CMM_2739	CMM_2740			TRUE	0.988	1.000	0.143	0.015	Y	NA
3751715	3751716	CMM_tRNA_0040	CMM_2741			FALSE	0.123	57.000	0.000	NA		NA
3751718	3751719	CMM_2743	CMM_2744			FALSE	0.130	51.000	0.000	NA		NA
3751720	3751721	CMM_2745	CMM_2746			FALSE	0.444	10.000	0.000	1.000		NA
3751721	3751722	CMM_2746	CMM_2747			FALSE	0.150	78.000	0.000	1.000		NA
3751722	3751723	CMM_2747	CMM_2748			FALSE	0.540	-7.000	0.000	NA		NA
3751723	3751724	CMM_2748	CMM_2749			FALSE	0.070	127.000	0.000	NA		NA
3751724	3751725	CMM_2749	CMM_2750			FALSE	0.169	38.000	0.000	NA		NA
3751725	3751726	CMM_2750	CMM_2751		kdpA	FALSE	0.008	386.000	0.000	NA		NA
3751726	3751727	CMM_2751	CMM_2752	kdpA	kdpB	TRUE	0.988	-3.000	0.124	0.001	Y	NA
3751727	3751728	CMM_2752	CMM_2753	kdpB	kdpC	TRUE	0.984	43.000	0.877	0.001	Y	NA
3751728	3751729	CMM_2753	CMM_2754	kdpC	kdpD	TRUE	0.610	32.000	0.006	0.069	N	NA
3751729	3751730	CMM_2754	CMM_2755	kdpD	kdpE	TRUE	0.992	-3.000	0.500	1.000	Y	NA
3751730	3751731	CMM_2755	CMM_2756	kdpE		FALSE	0.291	54.000	0.000	1.000	N	NA
3751731	3751732	CMM_2756	CMM_2757			FALSE	0.155	42.000	0.000	NA		NA
3751735	3751736	CMM_2760	CMM_2761			FALSE	0.084	112.000	0.000	NA		NA
3751736	3751737	CMM_2761	CMM_2762			FALSE	0.078	118.000	0.000	NA		NA
3751737	3751738	CMM_2762	CMM_2763			FALSE	0.165	79.000	0.009	NA		NA
3751738	3751739	CMM_2763	CMM_2764			FALSE	0.128	52.000	0.000	NA		NA
3751739	3751740	CMM_2764	CMM_2765			TRUE	0.595	2.000	0.000	NA		NA
3751740	3751741	CMM_2765	CMM_2766			TRUE	0.981	-3.000	0.074	0.068	Y	NA
3751741	3751742	CMM_2766	CMM_2767			FALSE	0.158	71.000	0.000	1.000		NA
3751742	3751743	CMM_2767	CMM_2768			FALSE	0.158	71.000	0.000	1.000		NA
3751743	3751744	CMM_2768	CMM_2769			FALSE	0.025	185.000	0.000	NA		NA
3751744	3751745	CMM_2769	CMM_2770			TRUE	0.589	-3.000	0.000	NA		NA
3751745	3751746	CMM_2770	CMM_2771			FALSE	0.074	123.000	0.000	NA		NA
3751746	3751747	CMM_2771	CMM_2772			TRUE	0.941	-3.000	0.167	NA		NA
3751747	3751748	CMM_2772	CMM_2773			TRUE	0.629	-7.000	0.000	1.000		NA
3751748	3751749	CMM_2773	CMM_2774			FALSE	0.120	59.000	0.000	NA		NA
3751749	3751750	CMM_2774	CMM_2775			TRUE	0.589	-3.000	0.000	NA		NA
3751750	3751751	CMM_2775	CMM_2776			FALSE	0.324	11.000	0.000	NA		NA
3751752	3751753	CMM_2777	CMM_2778			FALSE	0.032	198.000	0.000	1.000		NA
3751754	3751755	CMM_2779	CMM_2780			TRUE	0.674	-3.000	0.000	1.000		NA
3751755	3751756	CMM_2780	CMM_2781			TRUE	0.710	0.000	0.000	1.000		NA
3751756	3751757	CMM_2781	CMM_2782			TRUE	0.998	-3.000	0.905	0.055	Y	NA
3751757	3751758	CMM_2782	CMM_2783			TRUE	0.997	-3.000	0.750	0.055	Y	NA
3751760	3751761	CMM_2785	CMM_2786		rplA	FALSE	0.127	105.000	0.002	1.000		NA
3751761	3751762	CMM_2786	CMM_2787	rplA	rplK	TRUE	0.965	100.000	0.838	0.019	Y	NA
3751762	3751763	CMM_2787	CMM_2788	rplK	nusG	TRUE	0.901	54.000	0.681	1.000	N	NA
3751763	3751764	CMM_2788	CMM_2789	nusG	secE	TRUE	0.689	188.000	0.843	1.000	N	NA
3751764	3751765	CMM_2789	CMM_tRNA_0041	secE		FALSE	0.100	84.000	0.000	NA		NA
3751767	3751768	CMM_2791	CMM_2792	murB		TRUE	0.732	8.000	0.014	1.000	N	NA
3751768	3751769	CMM_2792	CMM_2793			TRUE	0.990	-3.000	0.222	0.046	Y	NA
3751769	3751770	CMM_2793	CMM_2794			FALSE	0.033	170.000	0.000	NA		NA
3751770	3751771	CMM_2794	CMM_2795			FALSE	0.008	370.000	0.000	NA		NA
3751771	3751772	CMM_2795	CMM_tRNA_0042			FALSE	0.023	196.000	0.000	NA		NA
3751772	3751773	CMM_tRNA_0042	CMM_tRNA_0043			FALSE	0.162	40.000	0.000	NA		NA
3751773	3751774	CMM_tRNA_0043	CMM_2796			FALSE	0.081	114.000	0.000	NA		NA
3751776	3751777	CMM_2798	CMM_2799		suhB	FALSE	0.025	226.000	0.000	1.000		NA
3751777	3751778	CMM_2799	CMM_2800	suhB		FALSE	0.141	46.000	0.000	NA		NA
3751778	3751779	CMM_2800	CMM_2801			FALSE	0.116	63.000	0.000	NA		NA
3751779	3751780	CMM_2801	CMM_tRNA_0044			FALSE	0.085	111.000	0.000	NA		NA
3751781	3751782	CMM_2802	CMM_2803			FALSE	0.104	82.000	0.000	NA		NA
3751783	3751784	CMM_2804	CMM_2805			FALSE	0.102	125.000	0.000	1.000		NA
3751784	3751785	CMM_2805	CMM_2806			FALSE	0.082	138.000	0.000	1.000		NA
3751785	3751786	CMM_2806	CMM_2807		menX	FALSE	0.401	91.000	0.039	1.000	N	NA
3751786	3751787	CMM_2807	CMM_2808	menX	menH	TRUE	0.711	36.000	0.006	1.000	Y	NA
3751787	3751788	CMM_2808	CMM_2809	menH		TRUE	0.601	8.000	0.000	NA	N	NA
3751790	3751791	CMM_2811	CMM_2812		menD	FALSE	0.110	116.000	0.000	1.000		NA
3751791	3751792	CMM_2812	CMM_2813	menD		FALSE	0.417	7.000	0.000	NA		NA
3751794	3751795	CMM_2815	CMM_2816		menA	FALSE	0.440	6.000	0.000	NA		NA
3751795	3751796	CMM_2816	CMM_2817	menA		FALSE	0.089	159.000	0.000	NA	N	NA
3751796	3751797	CMM_2817	CMM_2818			FALSE	0.186	99.000	0.000	NA	N	NA
3751797	3751798	CMM_2818	CMM_2819			FALSE	0.411	23.000	0.000	NA	N	NA
3751799	3751800	CMM_2820	CMM_2821			FALSE	0.530	-16.000	0.000	NA		NA
3751800	3751801	CMM_2821	CMM_2822			FALSE	0.088	106.000	0.000	NA		NA
3751801	3751802	CMM_2822	CMM_2823			FALSE	0.025	186.000	0.000	NA		NA
3751803	3751804	CMM_2824	CMM_2825			TRUE	0.803	-3.000	0.000	1.000	N	NA
3751804	3751805	CMM_2825	CMM_2826			TRUE	0.936	-3.000	0.079	1.000	N	NA
3751807	3751808	CMM_2828	CMM_2829			FALSE	0.223	39.000	0.000	1.000		NA
3751811	3751812	CMM_2832	CMM_2833			FALSE	0.111	77.000	0.000	NA		NA
3751812	3751813	CMM_2833	CMM_2834			FALSE	0.124	103.000	0.000	1.000		NA
3751815	3751816	CMM_2836	CMM_2837			TRUE	0.589	-3.000	0.000	NA		NA
3751816	3751817	CMM_2837	CMM_2838			TRUE	0.961	-3.000	0.280	NA		NA
3751818	3751819	CMM_2839	CMM_2840			FALSE	0.146	235.000	0.000	1.000	Y	NA
3751819	3751820	CMM_2840	CMM_2841			TRUE	0.770	-7.000	0.000	1.000	N	NA
3751821	3751822	CMM_2842	CMM_2843			TRUE	0.994	3.000	0.676	NA	Y	NA
3751822	3751823	CMM_2843	CMM_2844			TRUE	0.989	-3.000	0.797	1.000		NA
3751823	3751824	CMM_2844	CMM_2845			TRUE	0.674	-3.000	0.000	1.000		NA
3751825	3751826	CMM_2846	CMM_2847			TRUE	0.849	29.000	0.338	NA		NA
3751826	3751827	CMM_2847	CMM_2848			FALSE	0.007	432.000	0.000	NA		NA
3751828	3751829	CMM_2849	CMM_2850			FALSE	0.023	197.000	0.000	NA		NA
3751829	3751830	CMM_2850	CMM_2851			FALSE	0.136	48.000	0.000	NA		NA
3751830	3751831	CMM_2851	CMM_2852			FALSE	0.123	57.000	0.000	NA		NA
3751833	3751834	CMM_2854	CMM_2855			TRUE	0.767	-3.000	0.000	NA	N	NA
3751835	3751836	CMM_2856	CMM_2857			FALSE	0.128	52.000	0.000	NA		NA
3751836	3751837	CMM_2857	CMM_2858			FALSE	0.356	10.000	0.000	NA		NA
3751837	3751838	CMM_2858	CMM_2859			TRUE	0.589	-3.000	0.000	NA		NA
3751839	3751840	CMM_2860	CMM_2861			FALSE	0.115	67.000	0.000	NA		NA
3751842	3751843	CMM_2863	CMM_2864			FALSE	0.188	33.000	0.000	NA		NA
3751843	3751844	CMM_2864	CMM_2865			TRUE	0.611	10.000	0.000	1.000	N	NA
3751844	3751845	CMM_2865	CMM_2866			FALSE	0.170	56.000	0.000	1.000		NA
3751845	3751846	CMM_2866	CMM_2867			FALSE	0.113	114.000	0.000	1.000		NA
3751846	3751847	CMM_2867	CMM_2868			FALSE	0.163	60.000	0.000	1.000		NA
3751847	3751848	CMM_2868	yybP-ykoY			FALSE	0.151	43.000	0.000	NA		NA
3751848	3751849	yybP-ykoY	CMM_2869			FALSE	0.109	78.000	0.000	NA		NA
3751849	3751850	CMM_2869	CMM_2870			FALSE	0.160	63.000	0.000	1.000		NA
3751851	3751852	CMM_2871	CMM_2872	pgaA		FALSE	0.109	118.000	0.000	1.000		NA
3751854	3751855	CMM_2874	CMM_2875			FALSE	0.165	39.000	0.000	NA		NA
3751855	3751856	CMM_2875	CMM_2876			FALSE	0.204	29.000	0.000	NA		NA
3751856	3751857	CMM_2876	CMM_2877			TRUE	0.992	-3.000	0.455	1.000	Y	NA
3751859	3751860	CMM_2879	CMM_2880			FALSE	0.090	101.000	0.000	NA		NA
3751864	3751865	CMM_2884	CMM_2885	ubiA	crtY2	TRUE	0.944	-7.000	0.217	NA		NA
3751865	3751866	CMM_2885	CMM_2886	crtY2	crtY1	TRUE	0.968	-3.000	0.333	NA		NA
3751866	3751867	CMM_2886	CMM_2887	crtY1	crtBI	TRUE	0.964	0.000	0.242	NA		NA
3751867	3751868	CMM_2887	CMM_2888	crtBI	crtE	TRUE	0.803	-3.000	0.000	1.000	N	NA
3751870	3751871	CMM_2890	CMM_2891			FALSE	0.097	128.000	0.000	1.000		NA
3751872	3751873	CMM_2892	CMM_2893			FALSE	0.152	77.000	0.000	1.000		NA
3751876	3751877	CMM_2896	CMM_2897			FALSE	0.053	144.000	0.000	NA		NA
3751877	3751878	CMM_2897	CMM_2898		aldA	FALSE	0.109	78.000	0.000	NA		NA
3751881	3751882	CMM_tRNA_0045	CMM_2901			FALSE	0.023	194.000	0.000	NA		NA
3751883	3751884	CMM_PS_24	CMM_2902			FALSE	0.008	368.000	0.000	NA		NA
3751885	3751886	CMM_2903	CMM_2904			TRUE	0.977	0.000	0.400	NA		NA
3751886	3751887	CMM_2904	CMM_2905			TRUE	0.978	-3.000	0.500	NA		NA
3751889	3751890	CMM_2907	CMM_2908	gntK	gntP	TRUE	0.801	83.000	0.154	1.000	Y	NA
3751891	3751892	CMM_2909	CMM_2910			FALSE	0.323	45.000	0.000	1.000	N	NA
3751892	3751893	CMM_2910	CMM_2911			FALSE	0.141	46.000	0.000	NA		NA
3751894	3751895	CMM_2912	CMM_2913			FALSE	0.366	59.000	0.000	0.045		NA
3751895	3751896	CMM_2913	CMM_2914			FALSE	0.115	65.000	0.000	NA		NA
3751897	3751898	CMM_2915	CMM_2916			FALSE	0.008	375.000	0.000	NA		NA
3751898	3751899	CMM_2916	CMM_2917			FALSE	0.043	157.000	0.000	NA		NA
3751900	3751901	CMM_2918	CMM_2919		deoC	FALSE	0.088	106.000	0.000	NA		NA
3751901	3751902	CMM_2919	CMM_2920	deoC		TRUE	0.829	0.000	0.000	1.000	N	NA
3751904	3751905	CMM_2922	CMM_2923			FALSE	0.090	101.000	0.000	NA		NA
3751905	3751906	CMM_2923	CMM_2924			FALSE	0.080	115.000	0.000	NA		NA
3751908	3751909	CMM_2926	CMM_2927			FALSE	0.079	116.000	0.000	NA		NA
3751910	3751911	CMM_2928	CMM_2929	fecE	fecD2	TRUE	0.698	35.000	0.000	1.000	Y	NA
3751911	3751912	CMM_2929	CMM_2930	fecD2	fecC2	TRUE	0.961	-3.000	0.000	0.054	Y	NA
3751913	3751914	CMM_2931	CMM_2932	fecB2		FALSE	0.068	129.000	0.000	NA		NA
3751915	3751916	CMM_2933	CMM_2934		hupB	FALSE	0.245	132.000	0.043	1.000		NA
3751916	3751917	CMM_2934	CMM_2935	hupB	rpsN	FALSE	0.194	132.000	0.007	1.000	N	NA
3751917	3751918	CMM_2935	CMM_2936	rpsN	rpmG	TRUE	0.977	3.000	0.052	0.014	Y	NA
3751918	3751919	CMM_2936	CMM_2937	rpmG	rpmB	TRUE	0.994	0.000	0.332	0.014	Y	NA
3751919	3751920	CMM_2937	CMM_2938	rpmB	furB	FALSE	0.055	215.000	0.002	1.000	N	NA
3751920	3751921	CMM_2938	CMM_2939	furB		TRUE	0.972	-3.000	0.073	1.000	Y	NA
3751921	3751922	CMM_2939	CMM_2940			TRUE	0.991	-3.000	0.291	0.084	Y	NA
3751922	3751923	CMM_2940	CMM_2941			TRUE	0.984	-3.000	0.204	1.000	Y	NA
3751923	3751924	CMM_2941	CMM_2942			FALSE	0.459	70.000	0.040	1.000	N	NA
3751924	3751925	CMM_2942	CMM_2943			TRUE	0.980	41.000	0.860	0.059	Y	NA
3751925	3751926	CMM_2943	CMM_2944			TRUE	0.998	-3.000	0.917	0.001	Y	NA
3751926	3751927	CMM_2944	CMM_2945		hisC2	TRUE	0.789	10.000	0.043	1.000	N	NA
3751929	3751930	CMM_2947	CMM_2948			TRUE	0.589	-3.000	0.000	NA		NA
3751931	3751932	CMM_2949	CMM_2950		purB	FALSE	0.526	14.000	0.000	1.000	N	NA
3751933	3751934	CMM_2951	CMM_2952			FALSE	0.561	3.000	0.000	NA		NA
3751935	3751936	CMM_2953	CMM_2954	ppgK2		FALSE	0.519	91.000	0.000	1.000	Y	NA
3751938	3751939	CMM_2956	CMM_2957		prfC	FALSE	0.285	57.000	0.000	1.000	N	NA
3751939	3751940	CMM_2957	CMM_2958	prfC		FALSE	0.064	155.000	0.000	1.000		NA
3751941	3751942	CMM_2959	CMM_2960	dnaB	rplI	FALSE	0.026	457.000	0.012	1.000	N	NA
3751942	3751943	CMM_2960	CMM_2961	rplI	rpsR	TRUE	0.984	12.000	0.499	0.014	Y	NA
3751943	3751944	CMM_2961	CMM_2962	rpsR	ssb	FALSE	0.393	37.000	0.003	1.000	N	NA
3751944	3751945	CMM_2962	CMM_2963	ssb	rpsF	TRUE	0.760	4.000	0.003	1.000	N	NA
3751945	3751946	CMM_2963	CMM_2964	rpsF	pcnA	FALSE	0.291	164.000	0.002	1.000	Y	NA
3751947	3751948	CMM_2965	CMM_2966			FALSE	0.172	37.000	0.000	NA		NA
3751948	3751949	CMM_2966	CMM_2967		trxB1	FALSE	0.061	157.000	0.000	1.000		NA
3751949	3751950	CMM_2967	CMM_2968	trxB1	trxA	FALSE	0.533	68.000	0.021	0.001		NA
3751950	3751951	CMM_2968	CMM_2969	trxA		FALSE	0.122	171.000	0.036	1.000		NA
3751951	3751952	CMM_2969	CMM_2970		ddlB	TRUE	0.564	44.000	0.053	1.000	N	NA
3751953	3751954	CMM_2971	CMM_2972	parB1	parA	TRUE	0.993	0.000	0.827	1.000	N	NA
3751954	3751955	CMM_2972	CMM_2973	parA	gidB	TRUE	0.608	151.000	0.339	1.000	N	NA
3751955	3751956	CMM_2973	CMM_2974	gidB		FALSE	0.038	549.000	0.070	1.000		NA
3751956	3751957	CMM_2974	CMM_2975			TRUE	0.725	-3.000	0.005	1.000		NA
3751957	3751958	CMM_2975	CMM_2976			FALSE	0.359	11.000	0.002	NA		NA
3751958	3751959	CMM_2976	CMM_2977		rnpA	TRUE	0.979	-3.000	0.540	NA		NA
3751959	3751960	CMM_2977	CMM_2978	rnpA	rpmH	TRUE	0.984	4.000	0.787	1.000		NA
3751961	3751962	pCM1_0001	pCM1_0002			TRUE	0.589	-3.000	0.000	NA		NA
3751962	3751963	pCM1_0002	pCM1_0003		parA	FALSE	0.021	202.000	0.000	NA		NA
3751963	3751964	pCM1_0003	pCM1_0004	parA	parB	TRUE	0.674	-3.000	0.000	1.000		NA
3751964	3751965	pCM1_0004	pCM1_0005	parB	traG	FALSE	0.106	80.000	0.000	NA		NA
3751965	3751966	pCM1_0005	pCM1_0006	traG		FALSE	0.009	348.000	0.000	NA		NA
3751966	3751967	pCM1_0006	pCM1_0007			FALSE	0.144	45.000	0.000	NA		NA
3751969	3751970	pCM1_0009	pCM1_0010			FALSE	0.136	48.000	0.000	NA		NA
3751970	3751971	pCM1_0010	pCM1_0011			FALSE	0.379	9.000	0.000	NA		NA
3751971	3751972	pCM1_0011	pCM1_0012			FALSE	0.561	3.000	0.000	NA		NA
3751972	3751973	pCM1_0012	pCM1_0013			TRUE	0.991	-3.000	1.000	NA		NA
3751973	3751974	pCM1_0013	pCM1_0014			TRUE	0.589	-3.000	0.000	NA		NA
3751974	3751975	pCM1_0014	pCM1_0015			FALSE	0.268	15.000	0.000	NA		NA
3751975	3751976	pCM1_0015	pCM1_0016			TRUE	0.589	-3.000	0.000	NA		NA
3751976	3751977	pCM1_0016	pCM1_0017			FALSE	0.544	-6.000	0.000	NA		NA
3751977	3751978	pCM1_0017	pCM1_0018			TRUE	0.589	-3.000	0.000	NA		NA
3751980	3751981	pCM1_0020	pCM1_0021	celA		FALSE	0.007	459.000	0.000	NA		NA
3751981	3751982	pCM1_0021	pCM1_0022			FALSE	0.100	85.000	0.000	NA		NA
3751983	3751984	pCM1_0023	pCM1_0024	ppaJ		FALSE	0.005	684.000	0.000	NA		NA
3751984	3751985	pCM1_0024	pCM1_0025		pin	TRUE	0.589	-3.000	0.000	NA		NA
3751985	3751986	pCM1_0025	pCM1_0026	pin		FALSE	0.006	573.000	0.000	NA		NA
3751987	3751988	pCM1_0027	pCM1_0028		repA	FALSE	0.011	301.000	0.000	NA		NA
3751988	3751961	pCM1_0028	pCM1_0001	repA		FALSE	0.004	1711.000	0.000	NA		NA
3751991	3751992	pCM2_0003	pCM2_0004			FALSE	0.006	518.000	0.000	NA		NA
3751992	3751993	pCM2_0004	pCM2_0005		ssb	FALSE	0.008	396.000	0.000	NA		NA
3751993	3751994	pCM2_0005	pCM2_0006	ssb		FALSE	0.561	3.000	0.000	NA		NA
3751994	3751995	pCM2_0006	pCM2_0007			TRUE	0.589	-3.000	0.000	NA		NA
3751995	3751996	pCM2_0007	pCM2_0008			FALSE	0.116	63.000	0.000	NA		NA
3751996	3751997	pCM2_0008	pCM2_0009			FALSE	0.019	216.000	0.000	NA		NA
3751999	3752000	pCM2_0011	pCM2_0012			TRUE	0.589	-3.000	0.000	NA		NA
3752000	3752001	pCM2_0012	pCM2_0013		traA	FALSE	0.169	38.000	0.000	NA		NA
3752002	3752003	pCM2_0014	pCM2_0015		traG	TRUE	0.884	98.000	1.000	NA		NA
3752003	3752004	pCM2_0015	pCM2_PSEUDO_0001	traG		TRUE	0.629	0.000	0.000	NA		NA
3752004	3752005	pCM2_PSEUDO_0001	pCM2_PSEUDO_0002			TRUE	0.589	-3.000	0.000	NA		NA
3752005	3752006	pCM2_PSEUDO_0002	pCM2_0016			FALSE	0.176	36.000	0.000	NA		NA
3752006	3752007	pCM2_0016	pCM2_0017			TRUE	0.589	-3.000	0.000	NA		NA
3752009	3752010	pCM2_0021	pCM2_0022			FALSE	0.356	10.000	0.000	NA		NA
3752010	3752011	pCM2_0022	pCM2_0023			TRUE	0.629	0.000	0.000	NA		NA
3752011	3752012	pCM2_0023	pCM2_0024			TRUE	0.968	-7.000	0.429	NA		NA
3752012	3752013	pCM2_0024	pCM2_0025			TRUE	0.589	-3.000	0.000	NA		NA
3752013	3752014	pCM2_0025	pCM2_0026			TRUE	0.589	-3.000	0.000	NA		NA
3752014	3752015	pCM2_0026	pCM2_0027			TRUE	0.629	0.000	0.000	NA		NA
3752015	3752016	pCM2_0027	pCM2_0028			FALSE	0.077	119.000	0.000	NA		NA
3752016	3752017	pCM2_0028	pCM2_0029			TRUE	0.908	-3.000	0.083	NA		NA
3752017	3752018	pCM2_0029	pCM2_0030			FALSE	0.006	548.000	0.000	NA		NA
3752018	3752019	pCM2_0030	pCM2_0031			FALSE	0.008	376.000	0.000	NA		NA
3752020	3752021	pCM2_0032	pCM2_0033		parA	FALSE	0.016	289.000	0.000	1.000		NA
3752022	3752023	pCM2_0034	pCM2_0035		rhsA	FALSE	0.010	320.000	0.000	NA		NA
3752024	3752025	pCM2_PSEUDO_0003	pCM2_PSEUDO_0004			FALSE	0.527	-53.000	0.000	NA		NA
3752025	3752026	pCM2_PSEUDO_0004	pCM2_PSEUDO_0005			FALSE	0.526	-153.000	0.000	NA		NA
3752027	3752028	pCM2_0036	pCM2_0037			FALSE	0.076	120.000	0.000	NA		NA
3752029	3752030	pCM2_0038	pCM2_0039			FALSE	0.042	158.000	0.000	NA		NA
3752032	3752033	pCM2_0041	pCM2_0042			FALSE	0.005	750.000	0.000	NA		NA
3752035	3752036	pCM2_0044	pCM2_0045			FALSE	0.096	89.000	0.000	NA		NA
3752036	3752037	pCM2_0045	pCM2_0046			FALSE	0.128	53.000	0.000	NA		NA
3752038	3752039	pCM2_0047	pCM2_0048			FALSE	0.009	355.000	0.000	NA		NA
3752040	3752041	pCM2_0049	pCM2_0050			FALSE	0.011	294.000	0.000	NA		NA
3752042	3752043	pCM2_0051	pCM2_0052		phpB	FALSE	0.091	96.000	0.000	NA		NA
3752044	3752045	pCM2_0053	pCM2_0054	phpA	pat-1	FALSE	0.023	1073.000	0.000	0.003		NA
3752046	3752047	pCM2_0055	pCM2_0056			TRUE	0.982	-7.000	0.692	NA		NA
3752047	3752048	pCM2_0056	pCM2_0057			FALSE	0.005	764.000	0.000	NA		NA
3752048	3752049	pCM2_0057	pCM2_0058			FALSE	0.089	103.000	0.000	NA		NA
3752050	3752051	pCM2_0059	pCM2_0060			FALSE	0.561	3.000	0.000	NA		NA
3752051	3752052	pCM2_0060	pCM2_0061			FALSE	0.005	766.000	0.000	NA		NA
3752053	3752054	pCM2_0062	pCM2_0063			FALSE	0.134	49.000	0.000	NA		NA
3752055	3752056	pCM2_0064	pCM2_0065			FALSE	0.076	120.000	0.000	NA		NA
3752056	3752057	pCM2_0065	pCM2_0066			FALSE	0.219	26.000	0.000	NA		NA
3752058	3752059	pCM2_0067	pCM2_0068			TRUE	0.629	0.000	0.000	NA		NA
3752059	3752060	pCM2_0068	pCM2_0069			FALSE	0.253	18.000	0.000	NA		NA