MicrobesOnline Operon Predictions for Vibrio cholerae 2740-80

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column	Description
Gene1	VIMSS id of 1st gene in pair
SysName1	Systematic name of 1st gene in pair
Name1	Ordinary name of 1st gene in pair
Gene2	VIMSS id of 2nd gene in pair
SysName2	Systematic name of 2nd gene in pair
Name2	Ordinary name of 2nd gene in pair
bOp	Whether the pair is predicted to lie in the same operon or not
pOp	Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep	Distance between the two genes, in base pairs
MOGScore	Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore	Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim	Whether the genes share a COG category or not
ExprSim	Correlation of expression patterns (not available for most genomes)

Gene1	Gene2	SysName1	SysName2	Name1	Name2	bOp	pOp	Sep	MOGScore	GOScore	COGSim	ExprSim
3059988	3059989	VC274080_0149	VC274080_0150			FALSE	0.025	218.000	0.000	NA		NA
3059989	3059990	VC274080_0150	VC274080_0151			FALSE	0.496	24.000	0.000	NA		NA
3059991	3059992	VC274080_0152	VC274080_0153			FALSE	0.145	127.000	0.120	1.000	N	NA
3059992	3059993	VC274080_0153	VC274080_0154			FALSE	0.020	189.000	0.047	1.000		NA
3059995	3059996	VC274080_0156	VC274080_0157			TRUE	0.993	-3.000	0.547	0.002	N	NA
3059996	3059997	VC274080_0157	VC274080_0158			TRUE	0.994	-3.000	0.650	0.002	N	NA
3059998	3059999	VC274080_0159	VC274080_0160			FALSE	0.006	338.000	0.000	NA		NA
3059999	3060000	VC274080_0160	VC274080_0161		glpK	FALSE	0.012	112.000	0.032	1.000	N	NA
3060001	3060002	VC274080_0162	VC274080_0163			FALSE	0.011	276.000	0.000	NA		NA
3060002	3060003	VC274080_0163	VC274080_0164			TRUE	0.769	0.000	0.066	NA		NA
3060004	3060005	VC274080_0165	VC274080_0166			TRUE	0.949	-7.000	0.308	NA		NA
3060005	3060006	VC274080_0166	VC274080_0167			FALSE	0.319	42.000	0.089	NA		NA
3060006	3060007	VC274080_0167	VC274080_0168			TRUE	0.586	17.000	0.082	NA		NA
3060007	3060008	VC274080_0168	VC274080_0169			FALSE	0.095	102.000	0.036	NA		NA
3060008	3060009	VC274080_0169	VC274080_0170			FALSE	0.028	212.000	0.000	NA		NA
3060009	3060010	VC274080_0170	VC274080_0172			TRUE	0.831	18.000	0.278	NA	N	NA
3060011	3060012	VC274080_0171	VC274080_0173			FALSE	0.016	244.000	0.000	NA		NA
3060012	3060013	VC274080_0173	VC274080_0174			FALSE	0.247	59.000	0.000	NA		NA
3060013	3060014	VC274080_0174	VC274080_0175			TRUE	0.734	41.000	0.333	NA		NA
3060017	3060018	VC274080_0177	VC274080_0178			TRUE	0.964	3.000	0.333	NA		NA
3060018	3060019	VC274080_0178	VC274080_0179			TRUE	0.975	-7.000	0.667	NA		NA
3060019	3060020	VC274080_0179	VC274080_0180		cobQ	FALSE	0.002	603.000	0.000	1.000		NA
3060020	3060021	VC274080_0180	VC274080_0181	cobQ	modA	FALSE	0.118	12.000	0.010	1.000	N	NA
3060021	3060022	VC274080_0181	VC274080_0182	modA	modB	TRUE	0.990	4.000	0.035	0.001	Y	NA
3060022	3060023	VC274080_0182	VC274080_0183	modB	modC	TRUE	0.995	14.000	0.537	0.001	Y	NA
3060024	3060025	VC274080_0184	VC274080_0185			FALSE	0.395	87.000	0.167	NA		NA
3060025	3060026	VC274080_0185	VC274080_0186			TRUE	0.659	57.000	0.333	NA		NA
3060027	3060028	VC274080_0187	VC274080_0188			TRUE	0.767	-3.000	0.077	1.000		NA
3060031	3060032	VC274080_0191	VC274080_0192			TRUE	0.970	-7.000	0.562	NA		NA
3060032	3060033	VC274080_0192	VC274080_0193			FALSE	0.063	173.000	0.089	NA		NA
3060034	3060035	VC274080_0194	VC274080_0195			FALSE	0.087	122.000	0.007	NA		NA
3060036	3060037	VC274080_0196	VC274080_0197	mgsA	torT	FALSE	0.561	55.000	0.049	NA	Y	NA
3060039	3060040	VC274080_0199	VC274080_0200	pyk		TRUE	0.712	122.000	0.267	1.000	Y	NA
3060041	3060042	VC274080_A0746	VC274080_0201			FALSE	0.410	31.000	0.000	NA		NA
3060042	3060043	VC274080_0201	VC274080_0202			TRUE	0.712	-3.000	0.105	1.000	N	NA
3060043	3060044	VC274080_0202	VC274080_0204			TRUE	0.951	-25.000	0.158	1.000	Y	NA
3060045	3060046	VC274080_0203	VC274080_0205			FALSE	0.200	79.000	0.000	1.000		NA
3060046	3060047	VC274080_0205	VC274080_0206			FALSE	0.004	386.000	0.000	NA		NA
3060049	3060050	VC274080_0208	VC274080_0209	glgC		FALSE	0.003	303.000	0.000	1.000	N	NA
3060051	3060052	VC274080_0210	VC274080_0211			FALSE	0.212	77.000	0.000	NA		NA
3060052	3060053	VC274080_0211	VC274080_0212		secD	FALSE	0.384	72.000	0.155	NA		NA
3060053	3060054	VC274080_0212	VC274080_0213	secD	secF	TRUE	0.997	4.000	0.366	0.002	Y	NA
3060054	3060055	VC274080_0213	VC274080_0214	secF		FALSE	0.001	671.000	0.000	1.000	N	NA
3060055	3060056	VC274080_0214	VC274080_0215			TRUE	0.985	13.000	0.812	1.000	Y	NA
3060056	3060057	VC274080_0215	VC274080_0216			TRUE	0.881	30.000	0.652	NA		NA
3060057	3060058	VC274080_0216	VC274080_0217			FALSE	0.491	58.000	0.187	NA		NA
3060059	3060060	VC274080_0218	VC274080_0219			TRUE	0.961	12.000	0.238	0.060	N	NA
3060060	3060061	VC274080_0219	VC274080_0220			TRUE	0.935	110.000	0.667	0.060	Y	NA
3060061	3060062	VC274080_0220	VC274080_0221			TRUE	0.711	113.000	0.259	0.060	N	NA
3060062	3060063	VC274080_0221	VC274080_0222			TRUE	0.795	68.000	0.389	0.080	N	NA
3060063	3060064	VC274080_0222	VC274080_0223			TRUE	0.998	3.000	0.900	0.031	Y	NA
3060066	3060067	VC274080_0225	VC274080_0226			TRUE	0.966	12.000	0.667	NA		NA
3060067	3060068	VC274080_0226	VC274080_0227		napB	TRUE	0.940	18.000	0.245	NA	Y	NA
3060068	3060069	VC274080_0227	VC274080_0228	napB	napA	TRUE	0.869	67.000	0.643	NA	Y	NA
3060069	3060070	VC274080_0228	VC274080_0229	napA	napD	TRUE	0.951	-3.000	0.348	NA	N	NA
3060070	3060071	VC274080_0229	VC274080_0230	napD	napF	TRUE	0.732	27.000	0.209	NA		NA
3060072	3060073	VC274080_0231	VC274080_0232			TRUE	0.978	-10.000	0.051	0.031	Y	NA
3060074	3060075	VC274080_0233	VC274080_0234			FALSE	0.013	261.000	0.000	NA		NA
3060078	3060079	VC274080_0237	VC274080_0238		sdaA	TRUE	0.931	11.000	0.000	1.000	Y	NA
3060080	3060081	VC274080_0239	VC274080_0240			FALSE	0.001	406.000	0.000	1.000	N	NA
3060084	3060085	VC274080_0243	VC274080_0244			TRUE	0.928	10.000	0.222	NA		NA
3060085	3060086	VC274080_0244	VC274080_0245			FALSE	0.020	234.000	0.130	1.000	N	NA
3060089	3060090	VC274080_0248	VC274080_0249			FALSE	0.037	76.000	0.070	1.000	N	NA
3060093	3060094	VC274080_0252	VC274080_0253			TRUE	0.968	-3.000	0.421	NA		NA
3060094	3060095	VC274080_0253	VC274080_0254			TRUE	0.603	89.000	0.341	NA		NA
3060095	3060096	VC274080_0254	VC274080_0255			TRUE	0.974	0.000	0.488	NA		NA
3060096	3060097	VC274080_0255	VC274080_0256			TRUE	0.942	11.000	0.312	NA		NA
3060097	3060098	VC274080_0256	VC274080_0257			TRUE	0.927	-3.000	0.190	1.000		NA
3060098	3060099	VC274080_0257	VC274080_0258			FALSE	0.164	116.000	0.077	NA		NA
3060100	3060101	VC274080_0259	VC274080_0260			FALSE	0.091	66.000	0.031	1.000		NA
3060102	3060103	VC274080_0261	VC274080_0262			TRUE	0.700	17.000	0.115	NA		NA
3060103	3060104	VC274080_0262	VC274080_0263			TRUE	0.901	11.000	0.188	NA		NA
3060104	3060105	VC274080_0263	VC274080_0264			FALSE	0.374	110.000	0.159	NA		NA
3060105	3060106	VC274080_0264	VC274080_0265			TRUE	0.938	2.000	0.259	NA	N	NA
3060106	3060107	VC274080_0265	VC274080_0266			FALSE	0.010	216.000	0.000	NA	N	NA
3060107	3060108	VC274080_0266	VC274080_0268			TRUE	0.959	4.000	0.312	1.000		NA
3060109	3060110	VC274080_0267	VC274080_0269			FALSE	0.573	10.000	0.024	NA		NA
3060111	3060112	VC274080_0270	VC274080_0271			FALSE	0.472	40.000	0.128	NA		NA
3060112	3060113	VC274080_0271	VC274080_0272			TRUE	0.715	33.000	0.240	1.000		NA
3060113	3060114	VC274080_0272	VC274080_0273			TRUE	0.895	16.000	0.087	0.065		NA
3060114	3060115	VC274080_0273	VC274080_0274			TRUE	0.690	13.000	0.087	NA		NA
3060115	3060116	VC274080_0274	VC274080_0275			FALSE	0.024	222.000	0.000	NA		NA
3060119	3060120	VC274080_0278	VC274080_0279	tkt	tal	FALSE	0.553	97.000	0.105	1.000	Y	NA
3060122	3060123	VC274080_0281	VC274080_0282			TRUE	0.594	22.000	0.106	NA		NA
3060123	3060124	VC274080_0282	VC274080_0283			FALSE	0.019	184.000	0.025	NA		NA
3060125	3060126	VC274080_0843	VC274080_0844			FALSE	0.121	193.000	0.203	NA		NA
3060126	3060127	VC274080_0844	VC274080_0845			FALSE	0.311	21.000	0.016	NA		NA
3060127	3060128	VC274080_0845	VC274080_0847			FALSE	0.008	305.000	0.000	NA		NA
3060130	3060131	VC274080_0848	VC274080_0849	guaB	guaA	TRUE	0.918	107.000	0.190	0.001	Y	NA
3060131	3060132	VC274080_0849	VC274080_0850	guaA		FALSE	0.018	236.000	0.000	1.000		NA
3060132	3060133	VC274080_0850	VC274080_0851			FALSE	0.083	191.000	0.143	NA		NA
3060133	3060134	VC274080_0851	VC274080_0852		vibB	FALSE	0.008	312.000	0.000	NA		NA
3060135	3060136	VC274080_0853	VC274080_0854	vibE	vibC	TRUE	0.971	11.000	0.255	1.000	Y	NA
3060139	3060140	VC274080_0857	VC274080_0858	viuP	viuD	TRUE	0.991	-3.000	0.739	1.000	Y	NA
3060140	3060141	VC274080_0858	VC274080_0859	viuD	viuG	TRUE	0.991	-21.000	0.447	0.060	Y	NA
3060141	3060142	VC274080_0859	VC274080_0860	viuG	viuC	TRUE	0.641	117.000	0.173	1.000	Y	NA
3060142	3060143	VC274080_0860	VC274080_0861	viuC	vibD	TRUE	0.621	-69.000	0.115	1.000	N	NA
3060143	3060144	VC274080_0861	VC274080_0862	vibD		TRUE	0.917	10.000	0.269	1.000	N	NA
3060144	3060145	VC274080_0862	VC274080_0863			FALSE	0.009	218.000	0.000	1.000	N	NA
3060146	3060147	VC274080_0864	VC274080_0865		dadA	FALSE	0.020	378.000	0.000	1.000	Y	NA
3060148	3060149	VC274080_0866	VC274080_0867			FALSE	0.055	125.000	0.079	NA	N	NA
3060149	3060150	VC274080_0867	VC274080_0868			FALSE	0.052	166.000	0.063	NA		NA
3060151	3060152	VC274080_0869	VC274080_0870	citB	citA	TRUE	0.985	14.000	1.000	1.000	Y	NA
3060152	3060153	VC274080_0870	VC274080_0871	citA	oadB-2	FALSE	0.283	71.000	0.159	1.000	N	NA
3060153	3060154	VC274080_0871	VC274080_0872	oadB-2	oadA-2	TRUE	0.995	16.000	0.886	0.002	Y	NA
3060154	3060155	VC274080_0872	VC274080_0873	oadA-2		TRUE	0.998	1.000	0.720	0.002	Y	NA
3060155	3060156	VC274080_0873	VC274080_0874		citS	TRUE	0.614	95.000	0.140	1.000	Y	NA
3060157	3060158	VC274080_0875	VC274080_0876	citC	citD	TRUE	0.692	52.000	0.128	1.000	Y	NA
3060158	3060159	VC274080_0876	VC274080_0877	citD	citE	TRUE	0.994	-3.000	0.537	0.001	N	NA
3060159	3060160	VC274080_0877	VC274080_0878	citE	citF	TRUE	0.959	-64.000	0.104	0.001	N	NA
3060160	3060161	VC274080_0878	VC274080_0879	citF	citX	TRUE	0.724	-3.000	0.108	1.000	N	NA
3060161	3060162	VC274080_0879	VC274080_0880	citX	citG	TRUE	0.837	59.000	0.400	1.000	Y	NA
3060162	3060163	VC274080_0880	VC274080_0881	citG		FALSE	0.006	347.000	0.000	NA		NA
3060163	3060164	VC274080_0881	VC274080_0882			FALSE	0.095	75.000	0.013	NA		NA
3060168	3060169	VC274080_0886	VC274080_0887			FALSE	0.281	192.000	0.571	NA		NA
3060170	3060171	VC274080_0888	VC274080_0889			FALSE	0.235	70.000	0.097	NA		NA
3060171	3060172	VC274080_0889	VC274080_0890			TRUE	0.828	1.000	0.093	1.000		NA
3060172	3060173	VC274080_0890	VC274080_0891			FALSE	0.003	428.000	0.000	1.000		NA
3060173	3060174	VC274080_0891	VC274080_0892			TRUE	0.917	-15.000	0.219	NA		NA
3060176	3060177	VC274080_0894	VC274080_0895			FALSE	0.007	322.000	0.000	NA		NA
3060177	3060178	VC274080_0895	VC274080_0896		aldA-1	FALSE	0.006	342.000	0.000	NA		NA
3060179	3060180	VC274080_0897	VC274080_0898	tagA		FALSE	0.554	113.000	0.300	NA		NA
3060180	3060181	VC274080_0898	VC274080_0899			TRUE	0.623	-3.000	0.015	NA		NA
3060181	3060182	VC274080_0899	VC274080_0900		tagD	FALSE	0.087	110.000	0.007	1.000		NA
3060184	3060185	VC274080_0902	VC274080_0903	tcpP	tcpH	TRUE	0.967	-15.000	0.600	NA		NA
3060185	3060186	VC274080_0903	VC274080_0904	tcpH	tcpA	FALSE	0.003	540.000	0.000	NA		NA
3060186	3060187	VC274080_0904	VC274080_0905	tcpA	tcpB	TRUE	0.644	80.000	0.400	NA		NA
3060187	3060188	VC274080_0905	VC274080_0906	tcpB	tcpQ	TRUE	0.975	0.000	0.500	NA		NA
3060188	3060189	VC274080_0906	VC274080_0907	tcpQ	tcpC	TRUE	0.978	3.000	0.583	NA		NA
3060189	3060190	VC274080_0907	VC274080_0908	tcpC	tcpR	TRUE	0.953	-7.000	0.333	NA		NA
3060190	3060191	VC274080_0908	VC274080_0909	tcpR	tcpD	TRUE	0.969	-12.000	0.600	NA		NA
3060191	3060192	VC274080_0909	VC274080_0910	tcpD	tcpS	TRUE	0.956	16.000	0.800	NA		NA
3060192	3060193	VC274080_0910	VC274080_0911	tcpS	tcpT	TRUE	0.954	-10.000	0.364	NA		NA
3060193	3060194	VC274080_0911	VC274080_0912	tcpT	tcpE	TRUE	0.984	-25.000	0.636	1.000	Y	NA
3060194	3060195	VC274080_0912	VC274080_0913	tcpE	tcpF	TRUE	0.958	10.000	0.375	NA		NA
3060195	3060196	VC274080_0913	VC274080_0914	tcpF	tcpN/toxT	FALSE	0.031	207.000	0.000	NA		NA
3060196	3060197	VC274080_0914	VC274080_0915	tcpN/toxT	tcpJ	TRUE	0.951	0.000	0.333	1.000	N	NA
3060197	3060198	VC274080_0915	VC274080_0916	tcpJ	acfB	TRUE	0.983	7.000	0.333	1.000	Y	NA
3060198	3060199	VC274080_0916	VC274080_0917	acfB	acfC	TRUE	0.985	6.000	1.000	NA		NA
3060199	3060200	VC274080_0917	VC274080_0918	acfC		FALSE	0.386	16.000	0.019	NA		NA
3060200	3060201	VC274080_0918	VC274080_0919		tagE-1	TRUE	0.595	9.000	0.019	NA		NA
3060201	3060202	VC274080_0919	VC274080_0920	tagE-1		FALSE	0.014	823.000	0.000	0.033		NA
3060203	3060204	VC274080_0921	VC274080_0922			FALSE	0.002	720.000	0.000	NA		NA
3060204	3060205	VC274080_0922	VC274080_0923		ssrA	FALSE	0.077	167.000	0.000	NA		NA
3060205	3060206	VC274080_0923	VC274080_0924	ssrA	smpB	FALSE	0.219	69.000	0.000	NA		NA
3060207	3060208	VC274080_0925	VC274080_0926			TRUE	0.880	-3.000	0.124	NA		NA
3060209	3060210	VC274080_0927	VC274080_0928	smpA	recN	FALSE	0.013	108.000	0.049	1.000	N	NA
3060210	3060211	VC274080_0928	VC274080_0929	recN		FALSE	0.239	130.000	0.170	1.000	N	NA
3060214	3060215	VC274080_0932	VC274080_0933	dnaK	dnaJ	FALSE	0.581	201.000	0.236	0.004	Y	NA
3060217	3060218	VC274080_0935	VC274080_0936			TRUE	0.984	-31.000	0.652	NA	Y	NA
3060218	3060219	VC274080_0936	VC274080_0937			TRUE	0.979	-9.000	0.824	NA		NA
3060219	3060220	VC274080_0937	VC274080_0938			TRUE	0.958	-10.000	0.410	NA		NA
3060220	3060221	VC274080_0938	VC274080_0939			FALSE	0.002	398.000	0.000	NA	N	NA
3060221	3060222	VC274080_0939	VC274080_0940		yfhC	FALSE	0.014	69.000	0.025	NA	N	NA
3060223	3060224	VC274080_0941	VC274080_0942			FALSE	0.022	179.000	0.026	NA		NA
3060224	3060225	VC274080_0942	VC274080_0943			TRUE	0.648	0.000	0.026	NA		NA
3060226	3060227	VC274080_0944	VC274080_0945		purL	TRUE	0.620	-3.000	0.021	NA		NA
3060227	3060228	VC274080_0945	VC274080_0946	purL	tnpA	FALSE	0.021	175.000	0.000	1.000	N	NA
3060229	3060230	VC274080_0947	VC274080_0948			TRUE	0.968	6.000	0.421	NA		NA
3060230	3060231	VC274080_0948	VC274080_0949			FALSE	0.232	103.000	0.101	NA		NA
3060231	3060232	VC274080_0949	VC274080_0950		proS	FALSE	0.007	242.000	0.008	NA		NA
3060232	3060233	VC274080_0950	VC274080_0951	proS		FALSE	0.012	226.000	0.048	NA		NA
3060234	3060235	VC274080_0952	VC274080_0953			TRUE	0.968	-3.000	0.083	0.014		NA
3060235	3060236	VC274080_0953	VC274080_0954			FALSE	0.020	183.000	0.014	NA		NA
3060237	3060238	VC274080_0955	VC274080_0956			TRUE	0.626	-3.000	0.027	NA		NA
3060240	3060241	VC274080_0957	VC274080_0959			TRUE	0.823	4.000	0.000	NA		NA
3060242	3060243	VC274080_1775	VC274080_1776		smtA	TRUE	0.935	12.000	0.325	NA		NA
3060246	3060247	VC274080_1779	VC274080_1780	torD		FALSE	0.004	407.000	0.000	1.000		NA
3060247	3060248	VC274080_1780	VC274080_1781			FALSE	0.024	359.000	0.000	NA	Y	NA
3060248	3060249	VC274080_1781	VC274080_1782			FALSE	0.017	355.000	0.190	NA		NA
3060249	3060250	VC274080_1782	VC274080_1783			TRUE	0.738	34.000	0.270	NA		NA
3060251	3060252	VC274080_1784	VC274080_1785		glgA	FALSE	0.028	188.000	0.064	1.000		NA
3060252	3060253	VC274080_1785	VC274080_1786	glgA	glgC-1	TRUE	0.947	2.000	0.063	1.000	Y	NA
3060258	3060259	VC274080_1791	VC274080_1792	aat		TRUE	0.982	4.000	0.285	1.000	Y	NA
3060259	3060260	VC274080_1792	VC274080_1793		infA	FALSE	0.052	84.000	0.078	1.000	N	NA
3060261	3060262	VC274080_1794	VC274080_1795			FALSE	0.003	505.000	0.085	NA		NA
3060262	3060263	VC274080_1795	VC274080_1796			FALSE	0.454	56.000	0.164	1.000		NA
3060264	3060265	VC274080_1797	VC274080_1798			TRUE	0.708	-21.000	0.080	NA		NA
3060265	3060266	VC274080_1798	VC274080_1800			FALSE	0.406	45.000	0.120	NA		NA
3060267	3060268	VC274080_1799	VC274080_1801	gabD		TRUE	0.885	18.000	0.429	1.000	N	NA
3060269	3060270	VC274080_1802	VC274080_1803			TRUE	0.930	-100.000	0.364	NA		NA
3060270	3060271	VC274080_1803	VC274080_1804			TRUE	0.971	11.000	0.679	NA		NA
3060273	3060274	VC274080_1806	VC274080_1807	pqiA	pqiB	TRUE	0.983	-3.000	0.819	NA		NA
3060274	3060275	VC274080_1807	VC274080_1808	pqiB		TRUE	0.974	-3.000	0.531	NA		NA
3060275	3060276	VC274080_1808	VC274080_1809			FALSE	0.026	216.000	0.000	NA		NA
3060276	3060277	VC274080_1809	VC274080_1810			TRUE	0.940	0.000	0.273	NA	N	NA
3060277	3060278	VC274080_1810	VC274080_1811			FALSE	0.028	212.000	0.000	NA		NA
3060278	3060279	VC274080_1811	VC274080_1812			FALSE	0.008	313.000	0.000	NA		NA
3060279	3060280	VC274080_1812	VC274080_1813			TRUE	0.911	75.000	0.667	0.006		NA
3060281	3060282	VC274080_1814	VC274080_1815			TRUE	0.944	-9.000	0.293	NA		NA
3060282	3060283	VC274080_1815	VC274080_1816			TRUE	0.902	-3.000	0.147	NA		NA
3060283	3060284	VC274080_1816	VC274080_1817			TRUE	0.957	-7.000	0.360	NA		NA
3060284	3060285	VC274080_1817	VC274080_1818			FALSE	0.142	45.000	0.027	NA		NA
3060285	3060286	VC274080_1818	VC274080_1819			FALSE	0.281	28.000	0.048	NA		NA
3060286	3060287	VC274080_1819	VC274080_1820			TRUE	0.976	-7.000	0.700	NA		NA
3060287	3060288	VC274080_1820	VC274080_1821			TRUE	0.921	1.000	0.160	NA		NA
3060288	3060289	VC274080_1821	VC274080_1822			TRUE	0.977	-43.000	0.138	0.053	Y	NA
3060289	3060290	VC274080_1822	VC274080_1823			FALSE	0.237	141.000	0.138	NA		NA
3060290	3060291	VC274080_1823	VC274080_1824			TRUE	0.951	-18.000	0.389	NA		NA
3060293	3060294	VC274080_1826	VC274080_1827			TRUE	0.954	15.000	0.700	NA		NA
3060294	3060295	VC274080_1827	VC274080_1828			FALSE	0.212	182.000	0.300	NA		NA
3060295	3060296	VC274080_1828	VC274080_1829			FALSE	0.170	129.000	0.130	1.000	N	NA
3060296	3060297	VC274080_1829	VC274080_1830			TRUE	0.700	38.000	0.348	1.000	N	NA
3060297	3060298	VC274080_1830	VC274080_1831			TRUE	0.988	8.000	0.524	NA	Y	NA
3060298	3060299	VC274080_1831	VC274080_1832		dctP-1	TRUE	0.924	51.000	0.909	NA	Y	NA
3060300	3060301	VC274080_1833	VC274080_1834			TRUE	0.955	-12.000	0.143	1.000	Y	NA
3060301	3060302	VC274080_1834	VC274080_1835		nagA-2	TRUE	0.990	4.000	0.600	1.000	Y	NA
3060302	3060303	VC274080_1835	VC274080_1836	nagA-2	nanH	FALSE	0.025	345.000	0.000	1.000	Y	NA
3060305	3060306	VC274080_1838	VC274080_1839			TRUE	0.983	3.000	0.750	NA		NA
3060307	3060308	VC274080_1840	VC274080_1841		orfB	TRUE	0.814	-3.000	0.000	NA		NA
3060308	3060309	VC274080_1841	VC274080_1842	orfB	orfA	TRUE	0.983	-3.000	0.000	0.053	Y	NA
3060309	3060310	VC274080_1842	VC274080_1843	orfA		TRUE	0.811	7.000	0.000	NA		NA
3060310	3060311	VC274080_1843	VC274080_1844			FALSE	0.155	135.000	0.000	NA		NA
3060311	3060312	VC274080_1844	VC274080_1845			FALSE	0.283	49.000	0.000	NA		NA
3060312	3060313	VC274080_1845	VC274080_1846			FALSE	0.266	55.000	0.000	NA		NA
3060313	3060314	VC274080_1846	VC274080_1847			FALSE	0.580	19.000	0.000	NA		NA
3060314	3060315	VC274080_1847	VC274080_1848			TRUE	0.761	-13.000	0.000	NA		NA
3060315	3060316	VC274080_1848	VC274080_1849			FALSE	0.002	810.000	0.000	NA		NA
3060316	3060317	VC274080_1849	VC274080_1850			TRUE	0.828	3.000	0.000	NA		NA
3060317	3060318	VC274080_1850	VC274080_1851			TRUE	0.951	-70.000	0.571	1.000		NA
3060318	3060319	VC274080_1851	VC274080_1852			TRUE	0.811	7.000	0.000	NA		NA
3060319	3060320	VC274080_1852	VC274080_1853			TRUE	0.830	2.000	0.000	NA		NA
3060321	3060322	VC274080_1854	VC274080_1855			FALSE	0.022	227.000	0.000	NA		NA
3060322	3060323	VC274080_1855	VC274080_1856			TRUE	0.755	51.000	0.500	NA		NA
3060323	3060324	VC274080_1856	VC274080_1857			TRUE	0.753	107.000	0.750	NA		NA
3060329	3060330	VC274080_1861	VC274080_1863			FALSE	0.107	124.000	0.052	NA		NA
3060331	3060332	VC274080_1864	VC274080_1865	cry1		FALSE	0.179	-3.000	0.036	1.000	N	NA
3060333	3060334	VC274080_1866	VC274080_1867			FALSE	0.086	97.000	0.020	NA		NA
3060335	3060336	VC274080_1868	VC274080_1869	aldA-2	frvA	FALSE	0.002	333.000	0.000	1.000	N	NA
3060336	3060337	VC274080_1869	VC274080_1870	frvA	frwBC	TRUE	0.996	12.000	1.000	0.009	Y	NA
3060339	3060340	VC274080_1872	VC274080_1874	frwB		TRUE	0.997	9.000	0.679	0.009	Y	NA
3060342	3060343	VC274080_1875	VC274080_1876	fruA-1	manA-2	FALSE	0.567	116.000	0.333	1.000		NA
3060344	3060345	VC274080_1877	VC274080_1878			FALSE	0.006	336.000	0.000	1.000		NA
3060347	3060348	VC274080_1880	VC274080_1881	nadA		FALSE	0.021	174.000	0.013	1.000		NA
3060348	3060349	VC274080_1881	VC274080_1882		pal	TRUE	0.881	16.000	0.278	1.000		NA
3060351	3060352	VC274080_A0091	VC274080_A0090		phrB-2	FALSE	0.557	9.000	0.023	1.000		NA
3060352	3060353	VC274080_A0090	VC274080_A0089	phrB-2		FALSE	0.151	10.000	0.025	1.000	N	NA
3060353	3060354	VC274080_A0089	VC274080_A0088			TRUE	0.840	-10.000	0.119	NA		NA
3060355	3060356	VC274080_A0087	VC274080_A0086	deoD-2		TRUE	0.964	-28.000	0.636	1.000		NA
3060356	3060357	VC274080_A0086	VC274080_A0085			FALSE	0.382	119.000	0.182	1.000		NA
3060357	3060358	VC274080_A0085	VC274080_A0084			TRUE	0.985	-19.000	0.385	0.013		NA
3060358	3060359	VC274080_A0084	VC274080_A0083			FALSE	0.407	135.000	0.231	NA		NA
3060359	3060360	VC274080_A0083	VC274080_A0082			TRUE	0.950	0.000	0.238	NA		NA
3060361	3060362	VC274080_A0081	VC274080_A0080			TRUE	0.797	9.000	0.000	NA		NA
3060362	3060363	VC274080_A0080	VC274080_A0079			FALSE	0.020	233.000	0.000	NA		NA
3060365	3060366	VC274080_A0077	VC274080_A0076	glts		FALSE	0.256	198.000	0.571	NA		NA
3060367	3060368	VC274080_A0075	VC274080_A0074			FALSE	0.042	199.000	0.101	NA		NA
3060368	3060369	VC274080_A0074	VC274080_A0073			TRUE	0.977	-3.000	0.615	NA		NA
3060369	3060370	VC274080_A0073	VC274080_A0072			TRUE	0.863	14.000	0.194	NA		NA
3060370	3060371	VC274080_A0072	VC274080_A0071			FALSE	0.006	341.000	0.000	NA		NA
3060375	3060376	VC274080_A0067	VC274080_A0066			FALSE	0.398	98.000	0.174	NA		NA
3060377	3060378	VC274080_A0065	VC274080_A0064			TRUE	0.963	1.000	0.324	1.000		NA
3060378	3060379	VC274080_A0064	VC274080_A0063		chiA-2	FALSE	0.002	366.000	0.000	1.000	N	NA
3060382	3060383	VC274080_A0060	VC274080_A0059			FALSE	0.133	116.000	0.066	1.000		NA
3060384	3060385	VC274080_A0058	VC274080_A0057			FALSE	0.087	103.000	0.024	NA		NA
3060385	3060386	VC274080_A0057	VC274080_A0056			TRUE	0.968	1.000	0.357	NA		NA
3060386	3060387	VC274080_A0056	VC274080_A0055			TRUE	0.971	-3.000	0.467	NA		NA
3060387	3060388	VC274080_A0055	VC274080_A0054		vgrG-2	TRUE	0.902	0.000	0.133	NA		NA
3060388	3060389	VC274080_A0054	VC274080_A0053	vgrG-2	hcp-2	FALSE	0.170	128.000	0.000	NA		NA
3060389	3060390	VC274080_A0053	VC274080_A0052	hcp-2	glgB	FALSE	0.004	395.000	0.000	NA		NA
3060390	3060391	VC274080_A0052	VC274080_A0051	glgB	malQ	FALSE	0.545	206.000	0.235	0.006	Y	NA
3060391	3060392	VC274080_A0051	VC274080_A0050	malQ	malP	TRUE	0.912	86.000	0.314	0.020	Y	NA
3060396	3060397	VC274080_A0046	VC274080_A0045	garR		FALSE	0.143	43.000	0.037	1.000		NA
3060397	3060398	VC274080_A0045	VC274080_A0044			FALSE	0.427	88.000	0.184	NA		NA
3060398	3060399	VC274080_A0044	VC274080_A0043			FALSE	0.559	94.000	0.304	NA		NA
3060402	3060403	VC274080_A0040	VC274080_A0039			FALSE	0.031	207.000	0.000	NA		NA
3060403	3060404	VC274080_A0039	VC274080_A0038			TRUE	0.976	8.000	0.800	1.000	N	NA
3060406	3060407	VC274080_A0036	VC274080_A0035			FALSE	0.037	174.000	0.057	NA		NA
3060407	3060408	VC274080_A0035	VC274080_A0034			TRUE	0.978	11.000	0.923	NA		NA
3060408	3060409	VC274080_A0034	VC274080_A0033			TRUE	0.943	16.000	0.610	NA		NA
3060409	3060410	VC274080_A0033	VC274080_A0032			TRUE	0.966	10.000	0.500	NA		NA
3060410	3060411	VC274080_A0032	VC274080_A0031			FALSE	0.004	379.000	0.000	1.000		NA
3060411	3060412	VC274080_A0031	VC274080_A0030			TRUE	0.961	5.000	0.333	1.000		NA
3060412	3060413	VC274080_A0030	VC274080_A0029			TRUE	0.990	-10.000	0.917	1.000	Y	NA
3060414	3060415	VC274080_A0028	VC274080_A0027			FALSE	0.013	255.000	0.000	1.000		NA
3060415	3060416	VC274080_A0027	VC274080_A0026			TRUE	0.942	-81.000	0.472	1.000		NA
3060416	3060417	VC274080_A0026	VC274080_A0025			TRUE	0.993	-19.000	0.558	0.057	Y	NA
3060417	3060418	VC274080_A0025	VC274080_A0024			TRUE	0.993	-7.000	0.431	0.057	Y	NA
3060419	3060420	VC274080_A0023	VC274080_A0022		cheY-4	TRUE	0.972	-7.000	0.216	NA	Y	NA
3060420	3060421	VC274080_A0022	VC274080_A0021	cheY-4	cheA-3	TRUE	0.892	49.000	0.595	1.000	Y	NA
3060421	3060422	VC274080_A0021	VC274080_A0020	cheA-3	cheW-3	TRUE	0.993	9.000	0.280	0.025	Y	NA
3060422	3060423	VC274080_A0020	VC274080_A0019	cheW-3	cheW-2	TRUE	0.994	-3.000	0.304	0.025	Y	NA
3060423	3060424	VC274080_A0019	VC274080_A0018	cheW-2		TRUE	0.987	14.000	0.304	0.025	Y	NA
3060424	3060425	VC274080_A0018	VC274080_A0017		cheR-3	TRUE	0.971	15.000	0.500	1.000	Y	NA
3060425	3060426	VC274080_A0017	VC274080_A0016	cheR-3		TRUE	0.901	-61.000	0.078	1.000	Y	NA
3060426	3060427	VC274080_A0016	VC274080_A0015		cheB-3	TRUE	0.980	-3.000	0.267	1.000	Y	NA
3060427	3060428	VC274080_A0015	VC274080_A0014	cheB-3		TRUE	0.931	43.000	0.227	0.025	Y	NA
3060428	3060429	VC274080_A0014	VC274080_A0013			TRUE	0.967	10.000	0.184	NA	Y	NA
3060429	3060430	VC274080_A0013	VC274080_A0012			TRUE	0.922	24.000	0.286	NA	Y	NA
3060430	3060431	VC274080_A0012	VC274080_A0011			FALSE	0.005	259.000	0.000	1.000	N	NA
3060432	3060433	VC274080_A0010	VC274080_A0009			TRUE	0.827	15.000	0.234	1.000	N	NA
3060433	3060434	VC274080_A0009	VC274080_A0008			TRUE	0.973	6.000	0.514	NA		NA
3060434	3060435	VC274080_A0008	VC274080_A0007			TRUE	0.926	9.000	0.200	NA		NA
3060437	3060438	VC274080_A0005	VC274080_A0004			FALSE	0.193	100.000	0.091	1.000		NA
3060438	3060439	VC274080_A0004	VC274080_A0003			TRUE	0.695	68.000	0.500	NA		NA
3060439	3060440	VC274080_A0003	VC274080_A0002			TRUE	0.965	-33.000	0.667	NA		NA
3060440	3060441	VC274080_A0002	VC274080_A0001			TRUE	0.785	-7.000	0.000	NA		NA
3060443	3060444	VC274080_A0319	VC274080_A0320			FALSE	0.005	359.000	0.000	NA		NA
3060444	3060445	VC274080_A0320	VC274080_A0321			FALSE	0.222	68.000	0.000	NA		NA
3060445	3060446	VC274080_A0321	VC274080_A0322			TRUE	0.811	7.000	0.000	NA		NA
3060446	3060447	VC274080_A0322	VC274080_A0323			FALSE	0.184	121.000	0.000	NA		NA
3060447	3060448	VC274080_A0323	VC274080_A0324			FALSE	0.428	29.000	0.000	NA		NA
3060448	3060449	VC274080_A0324	VC274080_A0325		higA	TRUE	0.756	11.000	0.000	NA		NA
3060452	3060453	VC274080_A0328	VC274080_A0329			FALSE	0.004	424.000	0.000	NA		NA
3060454	3060455	VC274080_A0330	VC274080_A0331			FALSE	0.125	147.000	0.000	NA		NA
3060455	3060456	VC274080_A0331	VC274080_A0332			FALSE	0.004	421.000	0.000	NA		NA
3060456	3060457	VC274080_A0332	VC274080_A0333			FALSE	0.256	57.000	0.000	NA		NA
3060457	3060458	VC274080_A0333	VC274080_A0334			FALSE	0.241	61.000	0.000	NA		NA
3060458	3060459	VC274080_A0334	VC274080_A0335		mccF-1	FALSE	0.026	216.000	0.000	NA		NA
3060459	3060460	VC274080_A0335	VC274080_A0337	mccF-1		FALSE	0.256	57.000	0.000	NA		NA
3060462	3060463	VC274080_A0338	VC274080_A0339			FALSE	0.091	159.000	0.000	NA		NA
3060463	3060464	VC274080_A0339	VC274080_A0340			FALSE	0.224	67.000	0.000	NA		NA
3060464	3060465	VC274080_A0340	VC274080_A0341			FALSE	0.160	133.000	0.000	NA		NA
3060465	3060466	VC274080_A0341	VC274080_A0342			FALSE	0.137	141.000	0.000	NA		NA
3060466	3060467	VC274080_A0342	VC274080_A0343			FALSE	0.003	534.000	0.000	NA		NA
3060467	3060468	VC274080_A0343	VC274080_A0344		blc-2	TRUE	0.683	-88.000	0.000	NA		NA
3060468	3060469	VC274080_A0344	VC274080_A0345	blc-2		FALSE	0.219	69.000	0.000	NA		NA
3060469	3060470	VC274080_A0345	VC274080_A0346			FALSE	0.003	543.000	0.000	NA		NA
3060470	3060471	VC274080_A0346	VC274080_A0347			TRUE	0.814	-3.000	0.000	NA		NA
3060472	3060473	VC274080_A0348	VC274080_A0349		dinJ	TRUE	0.929	-34.000	0.308	NA		NA
3060473	3060474	VC274080_A0349	VC274080_A0350	dinJ		FALSE	0.019	236.000	0.000	NA		NA
3060477	3060478	VC274080_A0353	VC274080_A0354			FALSE	0.173	127.000	0.000	NA		NA
3060478	3060479	VC274080_A0354	VC274080_A0355			TRUE	0.625	-40.000	0.065	NA		NA
3060479	3060480	VC274080_A0355	VC274080_A0356			FALSE	0.214	73.000	0.000	NA		NA
3060480	3060481	VC274080_A0356	VC274080_A0357			FALSE	0.038	193.000	0.000	1.000		NA
3060481	3060482	VC274080_A0357	VC274080_A0358			FALSE	0.007	321.000	0.000	NA		NA
3060482	3060483	VC274080_A0358	VC274080_A0359			FALSE	0.129	145.000	0.000	NA		NA
3060483	3060484	VC274080_A0359	VC274080_A0360			FALSE	0.148	137.000	0.000	NA		NA
3060484	3060485	VC274080_A0360	VC274080_A0361			FALSE	0.014	258.000	0.000	NA		NA
3060485	3060486	VC274080_A0361	VC274080_A0362			FALSE	0.002	789.000	0.000	NA		NA
3060486	3060487	VC274080_A0362	VC274080_A0363			FALSE	0.129	145.000	0.000	NA		NA
3060487	3060488	VC274080_A0363	VC274080_A0364			FALSE	0.256	57.000	0.000	NA		NA
3060490	3060491	VC274080_A0366	VC274080_A0367			FALSE	0.006	335.000	0.000	NA		NA
3060491	3060492	VC274080_A0367	VC274080_A0368			FALSE	0.188	119.000	0.000	NA		NA
3060492	3060493	VC274080_A0368	VC274080_A0369			FALSE	0.114	150.000	0.000	NA		NA
3060493	3060494	VC274080_A0369	VC274080_A0370			FALSE	0.148	137.000	0.000	NA		NA
3060494	3060495	VC274080_A0370	VC274080_A0371			FALSE	0.003	565.000	0.000	NA		NA
3060495	3060496	VC274080_A0371	VC274080_A0372			FALSE	0.004	439.000	0.000	NA		NA
3060498	3060499	VC274080_A0374	VC274080_A0375			FALSE	0.002	840.000	0.000	NA		NA
3060499	3060500	VC274080_A0375	VC274080_A0376			FALSE	0.016	244.000	0.000	NA		NA
3060500	3060501	VC274080_A0376	VC274080_A0377			TRUE	0.841	56.000	1.000	NA		NA
3060501	3060502	VC274080_A0377	VC274080_A0378			FALSE	0.365	36.000	0.000	NA		NA
3060502	3060503	VC274080_A0378	VC274080_A0379			FALSE	0.044	189.000	0.000	NA		NA
3060503	3060504	VC274080_A0379	VC274080_A0380			FALSE	0.365	36.000	0.000	NA		NA
3060504	3060505	VC274080_A0380	VC274080_A0381			TRUE	0.805	8.000	0.000	NA		NA
3060505	3060506	VC274080_A0381	VC274080_A0382			FALSE	0.580	19.000	0.000	NA		NA
3060506	3060507	VC274080_A0382	VC274080_A0383			FALSE	0.132	144.000	0.000	NA		NA
3060507	3060508	VC274080_A0383	VC274080_A0384			FALSE	0.002	704.000	0.000	NA		NA
3060508	3060509	VC274080_A0384	VC274080_A0385			FALSE	0.114	150.000	0.000	NA		NA
3060509	3060510	VC274080_A0385	VC274080_A0386			FALSE	0.256	57.000	0.000	NA		NA
3060510	3060511	VC274080_A0386	VC274080_A0387			TRUE	0.985	7.000	1.000	NA		NA
3060511	3060512	VC274080_A0387	VC274080_A0388			FALSE	0.053	180.000	0.000	NA		NA
3060512	3060513	VC274080_A0388	VC274080_A0389			FALSE	0.200	97.000	0.000	NA		NA
3060513	3060514	VC274080_A0389	VC274080_A0390			FALSE	0.002	808.000	0.000	NA		NA
3060514	3060515	VC274080_A0390	VC274080_A0391			FALSE	0.018	240.000	0.000	NA		NA
3060515	3060516	VC274080_A0391	VC274080_A0392			FALSE	0.011	279.000	0.000	NA		NA
3060516	3060517	VC274080_A0392	VC274080_A0393			FALSE	0.009	298.000	0.000	NA		NA
3060517	3060518	VC274080_A0393	VC274080_A0394			FALSE	0.026	216.000	0.000	NA		NA
3060518	3060519	VC274080_A0394	VC274080_A0395			FALSE	0.003	574.000	0.000	NA		NA
3060519	3060520	VC274080_A0395	VC274080_A0396			FALSE	0.019	588.000	0.000	0.013		NA
3060520	3060521	VC274080_A0396	VC274080_A0397			FALSE	0.002	808.000	0.000	NA		NA
3060521	3060522	VC274080_A0397	VC274080_A0398			TRUE	0.793	-6.000	0.000	NA		NA
3060522	3060523	VC274080_A0398	VC274080_A0399			FALSE	0.256	57.000	0.000	NA		NA
3060523	3060524	VC274080_A0399	VC274080_A0400			TRUE	0.975	-31.000	1.000	NA		NA
3060524	3060525	VC274080_A0400	VC274080_A0401			FALSE	0.092	75.000	0.025	NA		NA
3060525	3060526	VC274080_A0401	VC274080_A0402			FALSE	0.115	57.000	0.025	NA		NA
3060528	3060529	VC274080_A0404	VC274080_A0405			TRUE	0.756	11.000	0.000	NA		NA
3060529	3060530	VC274080_A0405	VC274080_A0406			TRUE	0.803	-3.000	0.000	1.000		NA
3060530	3060531	VC274080_A0406	VC274080_A0407			FALSE	0.018	238.000	0.000	NA		NA
3060531	3060532	VC274080_A0407	VC274080_A0408			FALSE	0.002	801.000	0.000	NA		NA
3060532	3060533	VC274080_A0408	VC274080_A0409			FALSE	0.087	128.000	0.043	NA		NA
3060533	3060534	VC274080_A0409	VC274080_A0410			FALSE	0.043	185.000	0.083	NA		NA
3060534	3060535	VC274080_A0410	VC274080_A0411			FALSE	0.007	316.000	0.000	NA		NA
3060535	3060536	VC274080_A0411	VC274080_A0412			FALSE	0.093	158.000	0.000	NA		NA
3060536	3060537	VC274080_A0412	VC274080_A0413			FALSE	0.120	57.000	0.031	NA		NA
3060537	3060538	VC274080_A0413	VC274080_A0414			TRUE	0.763	64.000	0.667	NA		NA
3060538	3060539	VC274080_A0414	VC274080_A0415			FALSE	0.272	197.000	0.600	NA		NA
3060539	3060540	VC274080_A0415	VC274080_A0416			TRUE	0.734	67.000	0.600	NA		NA
3060540	3060541	VC274080_A0416	VC274080_A0417			TRUE	0.967	-40.000	0.750	NA		NA
3060541	3060542	VC274080_A0417	VC274080_A0418			FALSE	0.579	154.000	0.750	NA		NA
3060542	3060543	VC274080_A0418	VC274080_A0419			FALSE	0.125	147.000	0.000	NA		NA
3060543	3060544	VC274080_A0419	VC274080_A0420			FALSE	0.019	237.000	0.000	NA		NA
3060544	3060545	VC274080_A0420	VC274080_A0421			FALSE	0.011	279.000	0.000	NA		NA
3060545	3060546	VC274080_A0421	VC274080_A0422			FALSE	0.029	211.000	0.000	NA		NA
3060546	3060547	VC274080_A0422	VC274080_A0423			TRUE	0.805	157.000	0.750	0.012		NA
3060547	3060548	VC274080_A0423	VC274080_A0424			TRUE	0.623	148.000	0.750	NA		NA
3060548	3060549	VC274080_A0424	VC274080_A0425			TRUE	0.831	47.000	0.750	NA		NA
3060549	3060550	VC274080_A0425	VC274080_A0426			FALSE	0.002	991.000	0.000	NA		NA
3060551	3060552	VC274080_A0427	VC274080_A0428	orfB	orfA	TRUE	0.983	-3.000	0.000	0.050	Y	NA
3060554	3060555	VC274080_A0430	VC274080_A0431			TRUE	0.830	1.000	0.000	NA		NA
3060556	3060557	VC274080_A0432	VC274080_A0433			FALSE	0.114	57.000	0.021	NA		NA
3060557	3060558	VC274080_A0433	VC274080_A0434			TRUE	0.791	107.000	1.000	NA		NA
3060558	3060559	VC274080_A0434	VC274080_A0435			TRUE	0.981	-3.000	0.750	NA		NA
3060559	3060560	VC274080_A0435	VC274080_A0436			FALSE	0.002	1354.000	0.000	NA		NA
3060560	3060561	VC274080_A0436	VC274080_A0437			TRUE	0.732	-25.000	0.000	NA		NA
3060561	3060562	VC274080_A0437	VC274080_A0438			TRUE	0.756	11.000	0.000	NA		NA
3060562	3060563	VC274080_A0438	VC274080_A0439			FALSE	0.005	372.000	0.000	NA		NA
3060563	3060564	VC274080_A0439	VC274080_A0440			FALSE	0.201	100.000	0.000	NA		NA
3060564	3060565	VC274080_A0440	VC274080_A0441			FALSE	0.032	205.000	0.000	NA		NA
3060565	3060566	VC274080_A0441	VC274080_A0442			TRUE	0.588	57.000	0.250	NA		NA
3060566	3060567	VC274080_A0442	VC274080_A0443			TRUE	0.771	61.000	0.667	NA		NA
3060567	3060568	VC274080_A0443	VC274080_A0444			TRUE	0.705	-46.000	0.000	NA		NA
3060568	3060569	VC274080_A0444	VC274080_A0445			FALSE	0.193	116.000	0.000	NA		NA
3060569	3060570	VC274080_A0445	VC274080_A0446			FALSE	0.080	130.000	0.039	NA		NA
3060570	3060571	VC274080_A0446	VC274080_A0447			FALSE	0.017	184.000	0.033	1.000		NA
3060571	3060572	VC274080_A0447	VC274080_A0448			FALSE	0.091	67.000	0.033	1.000		NA
3060572	3060573	VC274080_A0448	VC274080_A0449			FALSE	0.214	193.000	0.375	NA		NA
3060573	3060574	VC274080_A0449	VC274080_A0450			FALSE	0.006	336.000	0.000	NA		NA
3060574	3060575	VC274080_A0450	VC274080_A0451			FALSE	0.022	228.000	0.000	NA		NA
3060575	3060576	VC274080_A0451	VC274080_A0452			FALSE	0.202	102.000	0.000	NA		NA
3060576	3060577	VC274080_A0452	VC274080_A0453		blc-3	TRUE	0.683	-88.000	0.000	NA		NA
3060577	3060578	VC274080_A0453	VC274080_A0454	blc-3		FALSE	0.009	303.000	0.000	NA		NA
3060578	3060579	VC274080_A0454	VC274080_A0455			FALSE	0.379	179.000	0.667	NA		NA
3060579	3060580	VC274080_A0455	VC274080_A0456			FALSE	0.425	162.000	0.500	NA		NA
3060580	3060581	VC274080_A0456	VC274080_A0457			TRUE	0.598	151.000	0.750	NA		NA
3060581	3060582	VC274080_A0457	VC274080_A0458			FALSE	0.499	151.000	0.500	NA		NA
3060584	3060585	VC274080_A0460	VC274080_A0461			FALSE	0.019	236.000	0.000	NA		NA
3060586	3060587	VC274080_A0462	VC274080_A0463			FALSE	0.004	423.000	0.000	NA		NA
3060587	3060588	VC274080_A0463	VC274080_A0464			FALSE	0.030	208.000	0.000	NA		NA
3060588	3060589	VC274080_A0464	VC274080_A0465			FALSE	0.015	250.000	0.000	NA		NA
3060590	3060591	VC274080_A0466	VC274080_A0467			TRUE	0.673	125.000	0.600	NA		NA
3060591	3060592	VC274080_A0467	VC274080_A0468			FALSE	0.519	163.000	0.750	NA		NA
3060592	3060593	VC274080_A0468	VC274080_A0469			FALSE	0.385	183.000	0.750	NA		NA
3060593	3060594	VC274080_A0469	VC274080_A0470			FALSE	0.011	281.000	0.000	NA		NA
3060594	3060595	VC274080_A0470	VC274080_A0471			FALSE	0.002	761.000	0.000	NA		NA
3060595	3060596	VC274080_A0471	VC274080_A0472			TRUE	0.688	119.000	0.600	NA		NA
3060596	3060597	VC274080_A0472	VC274080_A0473			TRUE	0.771	69.000	0.750	NA		NA
3060597	3060598	VC274080_A0473	VC274080_A0474			TRUE	0.682	82.000	0.500	NA		NA
3060598	3060599	VC274080_A0474	VC274080_A0475			TRUE	0.859	36.000	0.667	NA		NA
3060599	3060600	VC274080_A0475	VC274080_A0476			TRUE	0.805	8.000	0.000	NA		NA
3060600	3060601	VC274080_A0476	VC274080_A0477			FALSE	0.227	66.000	0.000	NA		NA
3060601	3060602	VC274080_A0477	VC274080_A0478			TRUE	0.972	-3.000	0.500	NA		NA
3060602	3060603	VC274080_A0478	VC274080_A0479			TRUE	0.835	-18.000	0.125	NA		NA
3060605	3060606	VC274080_A0481	VC274080_A0482			FALSE	0.061	178.000	0.095	NA		NA
3060606	3060607	VC274080_A0482	VC274080_A0483			FALSE	0.005	364.000	0.000	NA		NA
3060607	3060608	VC274080_A0483	VC274080_A0484			FALSE	0.198	114.000	0.000	NA		NA
3060608	3060609	VC274080_A0484	VC274080_A0485			TRUE	0.743	132.000	1.000	NA		NA
3060609	3060610	VC274080_A0485	VC274080_A0486			FALSE	0.356	189.000	0.750	NA		NA
3060610	3060611	VC274080_A0486	VC274080_A0487			FALSE	0.436	174.000	0.750	NA		NA
3060611	3060612	VC274080_A0487	VC274080_A0488			FALSE	0.523	154.000	0.600	NA		NA
3060614	3060615	VC274080_A0490	VC274080_A0491			FALSE	0.332	194.000	0.750	NA		NA
3060615	3060616	VC274080_A0491	VC274080_A0492			FALSE	0.005	385.000	0.000	NA		NA
3060616	3060617	VC274080_A0492	VC274080_A0493		mccF-2	FALSE	0.045	188.000	0.000	NA		NA
3060618	3060619	VC274080_2278	VC274080_2279	map	glnD	FALSE	0.416	90.000	0.243	1.000	N	NA
3060619	3060620	VC274080_2279	VC274080_2280	glnD		FALSE	0.006	246.000	0.031	NA		NA
3060621	3060622	VC274080_2281	VC274080_2282	pgpA	thiL	TRUE	0.905	-3.000	0.206	1.000	N	NA
3060622	3060623	VC274080_2282	VC274080_2283	thiL	nusB	FALSE	0.440	61.000	0.225	1.000	N	NA
3060623	3060624	VC274080_2283	VC274080_2284	nusB	ribE	TRUE	0.954	0.000	0.347	1.000	N	NA
3060624	3060625	VC274080_2284	VC274080_2285	ribE	ribB/A	FALSE	0.345	216.000	0.049	0.002	Y	NA
3060625	3060626	VC274080_2285	VC274080_2286	ribB/A	ribE	TRUE	0.648	41.000	0.065	1.000	Y	NA
3060626	3060627	VC274080_2286	VC274080_2287	ribE	ribD	TRUE	0.987	5.000	0.456	1.000	Y	NA
3060627	3060628	VC274080_2287	VC274080_2288	ribD	nrdR	TRUE	0.739	26.000	0.277	NA	N	NA
3060628	3060629	VC274080_2288	VC274080_2289	nrdR	proA	FALSE	0.012	100.000	0.011	NA	N	NA
3060629	3060630	VC274080_2289	VC274080_2290	proA	proB	TRUE	0.996	9.000	0.281	0.001	Y	NA
3060630	3060631	VC274080_2290	VC274080_2291	proB	crl	FALSE	0.105	64.000	0.012	NA		NA
3060631	3060632	VC274080_2291	VC274080_2292	crl		FALSE	0.548	134.000	0.381	NA		NA
3060632	3060633	VC274080_2292	VC274080_2293		gpt	FALSE	0.333	97.000	0.140	NA		NA
3060633	3060634	VC274080_2293	VC274080_2294	gpt		FALSE	0.261	38.000	0.067	1.000		NA
3060635	3060636	VC274080_2295	VC274080_2296	pepD		FALSE	0.091	234.000	0.000	0.030	N	NA
3060636	3060637	VC274080_2296	VC274080_2297		rimK	TRUE	0.737	-3.000	0.109	1.000	N	NA
3060637	3060638	VC274080_2297	VC274080_2298	rimK		TRUE	0.737	-40.000	0.102	1.000		NA
3060639	3060640	VC274080_2299	VC274080_2300			FALSE	0.451	157.000	0.500	1.000		NA
3060640	3060641	VC274080_2300	VC274080_2301			FALSE	0.416	64.000	0.158	NA		NA
3060641	3060642	VC274080_2301	VC274080_2302		dinP	FALSE	0.016	246.000	0.000	NA		NA
3060642	3060643	VC274080_2302	VC274080_2303	dinP		FALSE	0.141	109.000	0.063	NA		NA
3060643	3060644	VC274080_2303	VC274080_2304		apbE	TRUE	0.924	17.000	0.481	NA		NA
3060644	3060645	VC274080_2304	VC274080_2305	apbE	nqrF	TRUE	0.721	47.000	0.519	1.000	N	NA
3060645	3060646	VC274080_2305	VC274080_2306	nqrF	nqrE	TRUE	0.981	34.000	0.551	0.002	Y	NA
3060646	3060647	VC274080_2306	VC274080_2307	nqrE	nqrD	TRUE	0.994	8.000	0.188	0.002	Y	NA
3060647	3060648	VC274080_2307	VC274080_2308	nqrD	nqrC	TRUE	0.996	0.000	0.312	0.002	Y	NA
3060648	3060649	VC274080_2308	VC274080_2309	nqrC	nqrB	TRUE	0.996	-13.000	0.603	0.002	Y	NA
3060649	3060650	VC274080_2309	VC274080_2310	nqrB	nqrA	TRUE	0.998	6.000	0.854	0.002	Y	NA
3060650	3060651	VC274080_2310	VC274080_2311	nqrA	bolA	FALSE	0.001	437.000	0.000	NA	N	NA
3060652	3060653	VC274080_2312	VC274080_2313			TRUE	0.924	-3.000	0.248	1.000	N	NA
3060653	3060654	VC274080_2313	VC274080_2314		ppiA	TRUE	0.832	-43.000	0.198	1.000	N	NA
3060654	3060655	VC274080_2314	VC274080_2315	ppiA		TRUE	0.674	69.000	0.467	1.000		NA
3060656	3060657	VC274080_2316	VC274080_2317			TRUE	0.980	-3.000	0.898	NA	N	NA
3060657	3060658	VC274080_2317	VC274080_2318			FALSE	0.161	91.000	0.077	1.000		NA
3060659	3060660	VC274080_2319	VC274080_2320		ompK	TRUE	0.970	-28.000	0.000	0.001		NA
3060660	3060661	VC274080_2320	VC274080_2321	ompK	panE	FALSE	0.008	139.000	0.011	1.000	N	NA
3060661	3060662	VC274080_2321	VC274080_2322	panE	thiJ	TRUE	0.909	-3.000	0.155	NA		NA
3060662	3060663	VC274080_2322	VC274080_2323	thiJ		TRUE	0.608	-16.000	0.048	NA		NA
3060664	3060665	VC274080_2324	VC274080_2325			TRUE	0.876	5.000	0.122	1.000		NA
3060665	3060666	VC274080_2325	VC274080_2326		mltA	FALSE	0.013	92.000	0.018	1.000	N	NA
3060666	3060667	VC274080_2326	VC274080_2327	mltA		FALSE	0.215	71.000	0.000	NA		NA
3060668	3060669	VC274080_2328	VC274080_2329	argA		FALSE	0.022	227.000	0.000	NA		NA
3060670	3060671	VC274080_2330	VC274080_2331	recD	recB	TRUE	0.998	-3.000	0.688	0.001	Y	NA
3060671	3060672	VC274080_2331	VC274080_2332	recB	recC	FALSE	0.549	265.000	0.542	0.001	Y	NA
3060672	3060673	VC274080_2332	VC274080_2333	recC		FALSE	0.006	239.000	0.000	1.000	N	NA
3060674	3060675	VC274080_2334	VC274080_2335			FALSE	0.386	116.000	0.173	NA		NA
3060675	3060676	VC274080_2335	VC274080_2336		dapD	FALSE	0.004	407.000	0.000	NA		NA
3060677	3060678	VC274080_2337	VC274080_2338			FALSE	0.095	103.000	0.044	1.000		NA
3060679	3060680	VC274080_2339	VC274080_2340			FALSE	0.002	190.000	0.047	1.000	N	NA
3060680	3060681	VC274080_2340	VC274080_2342			TRUE	0.641	-16.000	0.056	NA		NA
3060685	3060686	VC274080_2345	VC274080_2346			FALSE	0.009	136.000	0.052	NA	N	NA
3060686	3060687	VC274080_2346	VC274080_2347			FALSE	0.034	200.000	0.125	NA	N	NA
3060688	3060689	VC274080_2348	VC274080_2349	fusA-2	radA	FALSE	0.001	271.000	0.002	1.000	N	NA
3060693	3060694	VC274080_2353	VC274080_2354	deoD-1		FALSE	0.211	83.000	0.000	NA		NA
3060695	3060696	VC274080_2275	VC274080_2274		ompH	TRUE	0.964	15.000	0.354	1.000	Y	NA
3060696	3060697	VC274080_2274	VC274080_2273	ompH	lpxD	TRUE	0.990	10.000	0.814	1.000	Y	NA
3060697	3060698	VC274080_2273	VC274080_2272	lpxD	fabZ	TRUE	0.724	76.000	0.796	1.000	N	NA
3060698	3060699	VC274080_2272	VC274080_2271	fabZ	lpxA	TRUE	0.981	2.000	0.850	1.000	N	NA
3060699	3060700	VC274080_2271	VC274080_2270	lpxA	lpxB	FALSE	0.531	161.000	0.289	1.000	Y	NA
3060700	3060701	VC274080_2270	VC274080_2269	lpxB	rnhB	TRUE	0.629	25.000	0.186	1.000	N	NA
3060701	3060702	VC274080_2269	VC274080_2268	rnhB	dnaE	TRUE	0.827	24.000	0.104	1.000	Y	NA
3060702	3060703	VC274080_2268	VC274080_2267	dnaE	accA	FALSE	0.235	55.000	0.122	1.000	N	NA
3060703	3060704	VC274080_2267	VC274080_2266	accA	tilS	FALSE	0.124	140.000	0.123	1.000	N	NA
3060704	3060705	VC274080_2266	VC274080_2265	tilS		FALSE	0.028	36.000	0.015	1.000	N	NA
3060705	3060706	VC274080_2265	VC274080_2264			FALSE	0.002	377.000	0.000	1.000	N	NA
3060706	3060707	VC274080_2264	VC274080_2263		glnB-2	FALSE	0.013	154.000	0.067	1.000	N	NA
3060707	3060708	VC274080_2263	VC274080_2262	glnB-2		FALSE	0.257	69.000	0.103	NA		NA
3060709	3060710	VC274080_2261	VC274080_2260	mltD		FALSE	0.080	72.000	0.020	1.000		NA
3060713	3060714	VC274080_2257	VC274080_2256	dnaQ		TRUE	0.817	9.000	0.098	NA		NA
3060716	3060717	VC274080_2254	VC274080_2253	lpcA		FALSE	0.524	63.000	0.229	1.000		NA
3060718	3060719	VC274080_2252	VC274080_2251	purN	purM	TRUE	0.995	3.000	0.230	0.002	Y	NA
3060720	3060721	VC274080_2250	VC274080_2249	upp		FALSE	0.007	231.000	0.000	1.000	N	NA
3060722	3060723	VC274080_2248	VC274080_2247			FALSE	0.534	30.000	0.120	NA		NA
3060723	3060724	VC274080_2247	VC274080_2246			FALSE	0.131	182.000	0.182	NA		NA
3060730	3060731	VC274080_2240	VC274080_2239			TRUE	0.961	-3.000	0.333	NA		NA
3060732	3060733	VC274080_2238	VC274080_2237		gltX	TRUE	0.965	-19.000	0.016	0.001		NA
3060733	3060734	VC274080_2237	VC274080_2236	gltX	ompA	FALSE	0.009	296.000	0.000	1.000		NA
3060736	3060737	VC274080_2234	VC274080_2233	viuA	viuB	FALSE	0.036	304.000	0.000	NA	Y	NA
3060737	3060738	VC274080_2233	VC274080_2232	viuB	vibF	FALSE	0.006	246.000	0.000	NA	N	NA
3060740	3060741	VC274080_2230	VC274080_2229			TRUE	0.946	8.000	0.260	NA		NA
3060742	3060743	VC274080_2228	VC274080_2227		flgM	TRUE	0.940	98.000	0.361	0.002	Y	NA
3060743	3060744	VC274080_2227	VC274080_2226	flgM		TRUE	0.749	131.000	0.371	NA	Y	NA
3060745	3060746	VC274080_2225	VC274080_2224	cheV-3	cheR-2	TRUE	0.989	11.000	0.838	1.000	Y	NA
3060746	3060747	VC274080_2224	VC274080_2223	cheR-2	flgB	FALSE	0.240	220.000	0.309	1.000	Y	NA
3060747	3060748	VC274080_2223	VC274080_2222	flgB	flgC	TRUE	0.993	5.000	0.889	1.000	Y	NA
3060748	3060749	VC274080_2222	VC274080_2221	flgC	flgD	TRUE	0.964	18.000	0.478	NA	Y	NA
3060749	3060750	VC274080_2221	VC274080_2220	flgD	flgE	TRUE	0.958	29.000	0.875	NA	Y	NA
3060750	3060751	VC274080_2220	VC274080_2219	flgE	flgF	TRUE	0.789	183.000	0.594	0.006	Y	NA
3060751	3060752	VC274080_2219	VC274080_2218	flgF	flgG	TRUE	0.988	20.000	0.446	0.003	Y	NA
3060752	3060753	VC274080_2218	VC274080_2217	flgG	flgH	TRUE	0.995	15.000	0.909	0.006	Y	NA
3060753	3060754	VC274080_2217	VC274080_2216	flgH	flgI	TRUE	0.936	91.000	0.457	0.009	Y	NA
3060754	3060755	VC274080_2216	VC274080_2215	flgI	flgJ	TRUE	0.994	11.000	0.405	0.009	Y	NA
3060755	3060756	VC274080_2215	VC274080_2214	flgJ	flgK	TRUE	0.849	180.000	0.705	0.002	Y	NA
3060756	3060757	VC274080_2214	VC274080_2213	flgK	flgL	TRUE	0.978	13.000	0.182	0.001		NA
3060757	3060758	VC274080_2213	VC274080_2212	flgL		TRUE	0.726	60.000	0.000	0.006		NA
3060758	3060759	VC274080_2212	VC274080_2211			FALSE	0.223	80.000	0.094	NA		NA
3060759	3060760	VC274080_2211	VC274080_2210		flaA	FALSE	0.561	149.000	0.600	NA		NA
3060760	3060761	VC274080_2210	VC274080_2208	flaA	flaC	FALSE	0.062	555.000	0.000	0.002	Y	NA
3060762	3060763	VC274080_2209	VC274080_2207			FALSE	0.087	161.000	0.000	NA		NA
3060763	3060764	VC274080_2207	VC274080_2206			FALSE	0.320	42.000	0.000	NA		NA
3060764	3060765	VC274080_2206	VC274080_2205			FALSE	0.342	39.000	0.000	NA		NA
3060765	3060766	VC274080_2205	VC274080_2204			FALSE	0.306	44.000	0.000	NA		NA
3060766	3060767	VC274080_2204	VC274080_2203			TRUE	0.597	18.000	0.000	NA		NA
3060767	3060768	VC274080_2203	VC274080_2202			FALSE	0.512	23.000	0.000	NA		NA
3060768	3060769	VC274080_2202	VC274080_2192			TRUE	0.696	-60.000	0.000	NA		NA
3060769	3060771	VC274080_2192	VC274080_2201			FALSE	0.320	42.000	0.000	NA		NA
3060771	3060772	VC274080_2201	VC274080_2200			FALSE	0.320	42.000	0.000	NA		NA
3060772	3060773	VC274080_2200	VC274080_2199			FALSE	0.447	27.000	0.000	NA		NA
3060773	3060774	VC274080_2199	VC274080_2198			FALSE	0.320	42.000	0.000	NA		NA
3060774	3060775	VC274080_2198	VC274080_2197			TRUE	0.597	18.000	0.000	NA		NA
3060775	3060776	VC274080_2197	VC274080_2196			FALSE	0.496	24.000	0.000	NA		NA
3060776	3060777	VC274080_2196	VC274080_2195			FALSE	0.212	78.000	0.000	NA		NA
3060777	3060778	VC274080_2195	VC274080_2194			FALSE	0.436	28.000	0.000	NA		NA
3060778	3060779	VC274080_2194	VC274080_2193			FALSE	0.478	25.000	0.000	NA		NA
3060780	3060781	VC274080_0420	VC274080_0419			FALSE	0.528	162.000	0.000	0.001		NA
3060781	3060782	VC274080_0419	VC274080_0418		prmA	FALSE	0.061	209.000	0.152	1.000		NA
3060782	3060783	VC274080_0418	VC274080_0417	prmA		FALSE	0.451	113.000	0.042	1.000	Y	NA
3060783	3060784	VC274080_0417	VC274080_0416		fis	TRUE	0.590	24.000	0.161	1.000	N	NA
3060784	3060785	VC274080_0416	VC274080_0415	fis	gntR	TRUE	0.641	138.000	0.027	0.054	Y	NA
3060786	3060787	VC274080_0414	VC274080_0413	edd	gntV	TRUE	0.943	-3.000	0.066	1.000	Y	NA
3060788	3060789	VC274080_0412	VC274080_0411		eda	TRUE	0.951	13.000	0.192	1.000	Y	NA
3060789	3060790	VC274080_0411	VC274080_0410	eda		FALSE	0.008	223.000	0.000	1.000	N	NA
3060790	3060791	VC274080_0410	VC274080_0409			TRUE	0.871	21.000	0.333	NA		NA
3060791	3060792	VC274080_0409	VC274080_0408			FALSE	0.020	235.000	0.000	NA		NA
3060793	3060794	VC274080_0407	VC274080_0406	cadA		TRUE	0.718	44.000	0.125	1.000	Y	NA
3060794	3060795	VC274080_0406	VC274080_0405			FALSE	0.282	149.000	0.188	NA		NA
3060795	3060796	VC274080_0405	VC274080_0404			TRUE	0.756	11.000	0.000	NA		NA
3060796	3060797	VC274080_0404	VC274080_0403			FALSE	0.009	299.000	0.000	NA		NA
3060797	3060798	VC274080_0403	VC274080_0402			FALSE	0.514	161.000	0.065	0.083	Y	NA
3060799	3060800	VC274080_0401	VC274080_0400		purH	FALSE	0.107	76.000	0.004	NA		NA
3060800	3060801	VC274080_0400	VC274080_0399	purH	purD	TRUE	0.769	59.000	0.238	1.000	Y	NA
3060802	3060803	VC274080_0398	VC274080_0397		hupA	TRUE	0.827	1.000	0.087	NA		NA
3060805	3060806	VC274080_0395	VC274080_0394		manA-1	TRUE	0.896	-34.000	0.214	1.000		NA
3060806	3060807	VC274080_0394	VC274080_0393	manA-1		FALSE	0.003	494.000	0.000	1.000		NA
3060808	3060809	VC274080_0392	VC274080_0391			FALSE	0.195	0.000	0.050	NA	N	NA
3060809	3060810	VC274080_0391	VC274080_0390			FALSE	0.018	55.000	0.023	NA	N	NA
3060811	3060812	VC274080_0389	VC274080_0388			FALSE	0.336	40.000	0.000	NA		NA
3060812	3060813	VC274080_0388	VC274080_0387			TRUE	0.761	-13.000	0.000	NA		NA
3060813	3060814	VC274080_0387	VC274080_0386		galE-1	TRUE	0.981	8.000	0.297	1.000	Y	NA
3060815	3060816	VC274080_0385	VC274080_0384		rfbU	FALSE	0.241	61.000	0.000	NA		NA
3060816	3060817	VC274080_0384	VC274080_0383	rfbU	rfbV	TRUE	0.986	8.000	0.091	0.013	Y	NA
3060818	3060819	VC274080_0382	VC274080_0381			FALSE	0.003	550.000	0.000	NA		NA
3060819	3060820	VC274080_0381	VC274080_0380			TRUE	0.811	7.000	0.000	NA		NA
3060820	3060821	VC274080_0380	VC274080_0379			FALSE	0.093	158.000	0.000	NA		NA
3060821	3060822	VC274080_0379	VC274080_0378			FALSE	0.045	150.000	0.037	1.000		NA
3060822	3060823	VC274080_0378	VC274080_0377			FALSE	0.090	70.000	0.035	1.000		NA
3060823	3060824	VC274080_0377	VC274080_0376			FALSE	0.554	-9.000	0.035	1.000		NA
3060824	3060825	VC274080_0376	VC274080_0375		rfbL	TRUE	0.919	9.000	0.041	0.058	N	NA
3060825	3060826	VC274080_0375	VC274080_0374	rfbL		TRUE	0.965	6.000	0.375	1.000		NA
3060826	3060827	VC274080_0374	VC274080_0373		rfbI	TRUE	0.843	39.000	0.667	1.000		NA
3060827	3060828	VC274080_0373	VC274080_0372	rfbI	rfbH	TRUE	0.911	-61.000	0.000	NA	Y	NA
3060828	3060829	VC274080_0372	VC274080_0371	rfbH	rfbG	TRUE	0.924	-28.000	0.000	NA	Y	NA
3060829	3060830	VC274080_0371	VC274080_0370	rfbG	rfbE	TRUE	0.963	-3.000	0.130	1.000	Y	NA
3060830	3060831	VC274080_0370	VC274080_0369	rfbE	gmd	TRUE	0.949	11.000	0.130	1.000	Y	NA
3060831	3060832	VC274080_0369	VC274080_0368	gmd	rfbB	TRUE	0.910	3.000	0.200	1.000	N	NA
3060832	3060833	VC274080_0368	VC274080_0367	rfbB	rfbA	TRUE	0.937	3.000	0.267	1.000	N	NA
3060834	3060835	VC274080_0366	VC274080_0365	rfaD		FALSE	0.565	159.000	0.022	0.018	Y	NA
3060835	3060836	VC274080_0365	VC274080_0364			TRUE	0.623	8.000	0.041	1.000		NA
3060836	3060837	VC274080_0364	VC274080_0363			TRUE	0.682	2.000	0.039	NA		NA
3060837	3060838	VC274080_0363	VC274080_0362		rfaF	TRUE	0.934	-3.000	0.029	NA	Y	NA
3060838	3060839	VC274080_0362	VC274080_0361	rfaF		TRUE	0.932	-3.000	0.017	1.000	Y	NA
3060839	3060840	VC274080_0361	VC274080_0360			TRUE	0.948	-3.000	0.080	NA	Y	NA
3060840	3060841	VC274080_0360	VC274080_0359		kdtA	TRUE	0.890	-39.000	0.024	NA	Y	NA
3060841	3060842	VC274080_0359	VC274080_0358	kdtA		TRUE	0.620	-3.000	0.020	NA		NA
3060842	3060843	VC274080_0358	VC274080_0357			TRUE	0.981	3.000	0.667	NA		NA
3060843	3060844	VC274080_0357	VC274080_0356			TRUE	0.967	-3.000	0.400	NA		NA
3060844	3060845	VC274080_0356	VC274080_0355			TRUE	0.963	-3.000	0.350	NA		NA
3060846	3060847	VC274080_0354	VC274080_0353			TRUE	0.635	4.000	0.019	NA		NA
3060848	3060849	VC274080_0352	VC274080_0351			TRUE	0.627	43.000	0.058	NA	Y	NA
3060852	3060853	VC274080_0348	VC274080_0347	mutM		FALSE	0.571	10.000	0.022	NA		NA
3060853	3060854	VC274080_0347	VC274080_0346		rpmG	FALSE	0.011	221.000	0.004	NA		NA
3060854	3060855	VC274080_0346	VC274080_0345	rpmG	rpmB	TRUE	0.915	97.000	0.332	0.013	Y	NA
3060856	3060857	VC274080_A0894	VC274080_A0895			FALSE	0.009	301.000	0.000	NA		NA
3060857	3060858	VC274080_A0895	VC274080_A0896			TRUE	0.789	160.000	0.317	0.027	Y	NA
3060858	3060859	VC274080_A0896	VC274080_A0897			TRUE	0.960	1.000	0.293	NA		NA
3060859	3060860	VC274080_A0897	VC274080_A0898			TRUE	0.976	5.000	0.579	NA		NA
3060860	3060861	VC274080_A0898	VC274080_A0899			TRUE	0.973	11.000	0.737	NA		NA
3060861	3060862	VC274080_A0899	VC274080_A0900			TRUE	0.971	-12.000	0.824	NA	N	NA
3060862	3060863	VC274080_A0900	VC274080_A0901			TRUE	0.982	9.000	0.882	NA		NA
3060864	3060865	VC274080_A0902	VC274080_A0903			TRUE	0.987	1.000	1.000	NA		NA
3060867	3060868	VC274080_A0905	VC274080_A0906	malS		FALSE	0.581	-58.000	0.057	NA		NA
3060870	3060871	VC274080_A0908	VC274080_A0909	fadL-3		TRUE	0.780	16.000	0.146	NA		NA
3060871	3060872	VC274080_A0909	VC274080_A0910			FALSE	0.005	361.000	0.000	NA		NA
3060873	3060874	VC274080_A0911	VC274080_A0912	hap		FALSE	0.004	421.000	0.000	1.000		NA
3060874	3060875	VC274080_A0912	VC274080_A0913		ompW	TRUE	0.774	38.000	0.034	0.006		NA
3060876	3060877	VC274080_A0914	VC274080_A0915		pbpG	FALSE	0.003	531.000	0.000	NA		NA
3060877	3060878	VC274080_A0915	VC274080_A0916	pbpG		FALSE	0.007	235.000	0.000	1.000	N	NA
3060878	3060879	VC274080_A0916	VC274080_A0917		cydA-2	FALSE	0.499	129.000	0.400	1.000	N	NA
3060879	3060880	VC274080_A0917	VC274080_A0918	cydA-2	cydB-2	TRUE	0.991	13.000	0.500	0.043	Y	NA
3060880	3060881	VC274080_A0918	VC274080_A0919	cydB-2		FALSE	0.017	243.000	0.000	NA		NA
3060881	3060882	VC274080_A0919	VC274080_A0920			FALSE	0.004	397.000	0.000	NA		NA
3060884	3060885	VC274080_A0922	VC274080_A0923	dsdC		FALSE	0.003	300.000	0.000	1.000	N	NA
3060885	3060886	VC274080_A0923	VC274080_A0924			FALSE	0.581	108.000	0.333	1.000		NA
3060886	3060887	VC274080_A0924	VC274080_A0925			FALSE	0.003	629.000	0.000	NA		NA
3060887	3060888	VC274080_A0925	VC274080_A0926			TRUE	0.906	25.000	0.667	NA		NA
3060888	3060889	VC274080_A0926	VC274080_A0927			TRUE	0.966	12.000	0.667	NA		NA
3060889	3060890	VC274080_A0927	VC274080_A0928			TRUE	0.967	13.000	0.800	NA		NA
3060890	3060891	VC274080_A0928	VC274080_A0929			TRUE	0.852	51.000	1.000	NA		NA
3060891	3060892	VC274080_A0929	VC274080_A0931			FALSE	0.002	982.000	0.000	NA		NA
3060893	3060894	VC274080_A0930	VC274080_A0932	tdh	kbl	TRUE	0.969	3.000	0.547	1.000	N	NA
3060895	3060896	VC274080_A0933	VC274080_A0934			FALSE	0.007	147.000	0.016	1.000	N	NA
3060896	3060897	VC274080_A0934	VC274080_A0935			FALSE	0.161	-6.000	0.058	1.000	N	NA
3060898	3060899	VC274080_A0936	VC274080_A0937			FALSE	0.542	112.000	0.286	NA		NA
3060899	3060900	VC274080_A0937	VC274080_A0938			FALSE	0.322	106.000	0.132	NA		NA
3060900	3060901	VC274080_A0938	VC274080_A0939			TRUE	0.868	-49.000	0.245	1.000	N	NA
3060902	3060903	VC274080_A0940	VC274080_A0941		zwf	FALSE	0.002	344.000	0.000	1.000	N	NA
3060903	3060904	VC274080_A0941	VC274080_A0942	zwf	pgl	TRUE	0.973	-3.000	0.188	1.000	Y	NA
3060904	3060905	VC274080_A0942	VC274080_A0943	pgl	gnd	TRUE	0.975	14.000	0.039	0.002	Y	NA
3060905	3060906	VC274080_A0943	VC274080_A0944	gnd		FALSE	0.042	156.000	0.009	NA		NA
3060906	3060907	VC274080_A0944	VC274080_A0945			FALSE	0.012	268.000	0.000	NA		NA
3060907	3060908	VC274080_A0945	VC274080_A0946			TRUE	0.903	-6.000	0.169	1.000		NA
3060909	3060910	VC274080_A0947	VC274080_A0948			FALSE	0.105	136.000	0.063	NA		NA
3060910	3060911	VC274080_A0948	VC274080_A0949			TRUE	0.876	19.000	0.109	1.000	Y	NA
3060911	3060912	VC274080_A0949	VC274080_A0950			FALSE	0.075	159.000	0.120	1.000	N	NA
3060912	3060913	VC274080_A0950	VC274080_A0951			FALSE	0.341	141.000	0.040	1.000	Y	NA
3060913	3060914	VC274080_A0951	VC274080_A0952		hutZ	FALSE	0.003	307.000	0.000	1.000	N	NA
3060914	3060915	VC274080_A0952	VC274080_A0953	hutZ	hutX	TRUE	0.931	25.000	0.355	NA	Y	NA
3060915	3060916	VC274080_A0953	VC274080_A0954	hutX	hutW	TRUE	0.688	24.000	0.203	NA	N	NA
3060917	3060918	VC274080_A0955	VC274080_A0956	tonB1	exbB1	TRUE	0.990	0.000	0.473	0.013	N	NA
3060918	3060919	VC274080_A0956	VC274080_A0957	exbB1	exbD1	TRUE	0.995	-3.000	0.551	0.066	Y	NA
3060920	3060921	VC274080_A0494	VC274080_A0495			TRUE	0.636	135.000	0.600	NA		NA
3060921	3060922	VC274080_A0495	VC274080_A0496			FALSE	0.241	61.000	0.000	NA		NA
3060922	3060923	VC274080_A0496	VC274080_A0497		blc-4	TRUE	0.683	-88.000	0.000	NA		NA
3060924	3060925	VC274080_A0498	VC274080_A0499			TRUE	0.961	-10.000	0.160	NA	Y	NA
3060926	3060927	VC274080_A0500	VC274080_A0501			FALSE	0.527	76.000	0.250	NA		NA
3060927	3060928	VC274080_A0501	VC274080_A0502			TRUE	0.635	73.000	0.375	NA		NA
3060928	3060929	VC274080_A0502	VC274080_A0503			FALSE	0.230	65.000	0.000	NA		NA
3060929	3060930	VC274080_A0503	VC274080_A0504			FALSE	0.030	208.000	0.000	NA		NA
3060930	3060931	VC274080_A0504	VC274080_A0505			FALSE	0.002	819.000	0.000	NA		NA
3060931	3060932	VC274080_A0505	VC274080_A0506			TRUE	0.619	156.000	1.000	NA		NA
3060933	3060934	VC274080_A0507	VC274080_A0508		sbp	FALSE	0.005	383.000	0.000	NA		NA
3060935	3060936	VC274080_A0509	VC274080_A0510			FALSE	0.008	304.000	0.000	NA		NA
3060936	3060937	VC274080_A0510	VC274080_A0511			FALSE	0.007	323.000	0.000	NA		NA
3060937	3060938	VC274080_A0511	VC274080_A0512			TRUE	0.631	147.000	0.750	NA		NA
3060938	3060939	VC274080_A0512	VC274080_A0513			FALSE	0.371	147.000	0.250	NA		NA
3060939	3060940	VC274080_A0513	VC274080_A0514			TRUE	0.942	9.000	0.250	NA		NA
3060940	3060941	VC274080_A0514	VC274080_A0515			TRUE	0.978	-18.000	1.000	NA		NA
3060941	3060942	VC274080_A0515	VC274080_A0516			TRUE	0.701	131.000	0.750	NA		NA
3060942	3060943	VC274080_A0516	VC274080_A0517			TRUE	0.916	25.000	0.750	NA		NA
3060943	3060944	VC274080_A0517	VC274080_A0518			FALSE	0.002	1315.000	0.000	NA		NA
3060944	3060945	VC274080_A0518	VC274080_A0519			FALSE	0.097	67.000	0.021	NA		NA
3060945	3060946	VC274080_A0519	VC274080_A0520			TRUE	0.693	144.000	1.000	NA		NA
3060946	3060947	VC274080_A0520	VC274080_A0521			FALSE	0.003	567.000	0.000	NA		NA
3060947	3060948	VC274080_A0521	VC274080_A0522			FALSE	0.003	517.000	0.000	NA		NA
3060948	3060949	VC274080_A0522	VC274080_A0523			TRUE	0.959	-13.000	0.600	NA	N	NA
3060949	3060950	VC274080_A0523	VC274080_A0524			FALSE	0.053	137.000	0.020	1.000		NA
3060950	3060951	VC274080_A0524	VC274080_A0525			FALSE	0.029	168.000	0.020	NA		NA
3060953	3060954	VC274080_A0527	VC274080_A0528			FALSE	0.028	171.000	0.003	1.000		NA
3060954	3060955	VC274080_A0528	VC274080_A0529		doc	TRUE	0.614	0.000	0.013	1.000		NA
3060955	3060956	VC274080_A0529	VC274080_A0530	doc		FALSE	0.015	188.000	0.013	1.000		NA
3060956	3060957	VC274080_A0530	VC274080_A0531			FALSE	0.002	193.000	0.033	NA	N	NA
3060957	3060958	VC274080_A0531	VC274080_A0532			TRUE	0.963	-13.000	0.185	NA	Y	NA
3060958	3060959	VC274080_A0532	VC274080_A0533			FALSE	0.073	128.000	0.039	1.000		NA
3060959	3060960	VC274080_A0533	VC274080_A0534			FALSE	0.007	322.000	0.000	NA		NA
3060961	3060962	VC274080_A0535	VC274080_A0536			TRUE	0.803	-3.000	0.000	1.000		NA
3060963	3060964	VC274080_A0537	VC274080_A0538			FALSE	0.107	152.000	0.000	NA		NA
3060964	3060965	VC274080_A0538	VC274080_A0539			FALSE	0.137	141.000	0.000	NA		NA
3060965	3060966	VC274080_A0539	VC274080_A0540			FALSE	0.224	67.000	0.000	NA		NA
3060966	3060967	VC274080_A0540	VC274080_A0541			TRUE	0.803	-3.000	0.000	1.000		NA
3060967	3060968	VC274080_A0541	VC274080_A0542			FALSE	0.033	202.000	0.000	NA		NA
3060968	3060969	VC274080_A0542	VC274080_A0543			TRUE	0.765	-12.000	0.000	NA		NA
3060969	3060970	VC274080_A0543	VC274080_A0544			TRUE	0.719	79.000	0.600	NA		NA
3060970	3060971	VC274080_A0544	VC274080_A0545			FALSE	0.250	58.000	0.000	NA		NA
3060971	3060972	VC274080_A0545	VC274080_A0546			TRUE	0.692	69.000	0.500	NA		NA
3060972	3060973	VC274080_A0546	VC274080_A0547			FALSE	0.047	186.000	0.000	NA		NA
3060973	3060974	VC274080_A0547	VC274080_A0548			TRUE	0.793	-6.000	0.000	NA		NA
3060974	3060975	VC274080_A0548	VC274080_A0549			FALSE	0.241	61.000	0.000	NA		NA
3060975	3060976	VC274080_A0549	VC274080_A0550			FALSE	0.003	465.000	0.000	NA		NA
3060976	3060977	VC274080_A0550	VC274080_A0551			TRUE	0.805	57.000	0.750	NA		NA
3060979	3060980	VC274080_A0553	VC274080_A0554			FALSE	0.003	184.000	0.033	1.000	N	NA
3060980	3060981	VC274080_A0554	VC274080_A0555		orfA	FALSE	0.001	519.000	0.000	1.000	N	NA
3060981	3060982	VC274080_A0555	VC274080_A0556	orfA	orfB	TRUE	0.984	-3.000	0.000	0.047	Y	NA
3060984	3060985	VC274080_A0558	VC274080_A0559		nrdD	FALSE	0.003	463.000	0.000	1.000		NA
3060985	3060986	VC274080_A0559	VC274080_A0560	nrdD	nrdG	TRUE	0.962	5.000	0.464	1.000	N	NA
3060986	3060987	VC274080_A0560	VC274080_A0561	nrdG		FALSE	0.011	122.000	0.054	1.000	N	NA
3060987	3060988	VC274080_A0561	VC274080_A0562			FALSE	0.529	58.000	0.288	1.000	N	NA
3060989	3060990	VC274080_A0563	VC274080_A0564		fruA-2	FALSE	0.169	38.000	0.025	NA		NA
3060990	3060991	VC274080_A0564	VC274080_A0565	fruA-2	fruK	TRUE	0.979	13.000	0.562	1.000	Y	NA
3060991	3060992	VC274080_A0565	VC274080_A0566	fruK	fruB	TRUE	0.949	11.000	0.130	1.000	Y	NA
3060993	3060994	VC274080_A0567	VC274080_A0568	fruR		FALSE	0.018	54.000	0.012	1.000	N	NA
3060994	3060995	VC274080_A0568	VC274080_A0569			TRUE	0.998	2.000	0.669	0.001	Y	NA
3060995	3060996	VC274080_A0569	VC274080_A0570		luxN	FALSE	0.012	97.000	0.014	1.000	N	NA
3060997	3060998	VC274080_A0571	VC274080_A0572			FALSE	0.088	197.000	0.222	1.000	N	NA
3060998	3060999	VC274080_A0572	VC274080_A0573			FALSE	0.376	147.000	0.085	1.000	Y	NA
3061004	3061005	VC274080_A0578	VC274080_A0579			TRUE	0.967	-10.000	0.571	1.000		NA
3061007	3061008	VC274080_1400	VC274080_1399			FALSE	0.007	321.000	0.000	NA		NA
3061008	3061009	VC274080_1399	VC274080_1398		mglC	FALSE	0.004	410.000	0.000	1.000		NA
3061009	3061010	VC274080_1398	VC274080_1397	mglC	mglA	TRUE	0.998	5.000	0.905	0.002	Y	NA
3061013	3061014	VC274080_1394	VC274080_1393			TRUE	0.937	-21.000	0.314	NA		NA
3061016	3061017	VC274080_1391	VC274080_1390			TRUE	0.877	26.000	0.189	1.000	Y	NA
3061017	3061018	VC274080_1390	VC274080_1389		ompV	FALSE	0.011	213.000	0.000	NA	N	NA
3061018	3061019	VC274080_1389	VC274080_1388	ompV		TRUE	0.585	98.000	0.333	NA		NA
3061020	3061021	VC274080_1387	VC274080_1386			TRUE	0.985	-31.000	0.688	1.000	Y	NA
3061021	3061022	VC274080_1386	VC274080_1385			TRUE	0.952	10.000	0.464	1.000	N	NA
3061023	3061024	VC274080_1384	VC274080_1383			TRUE	0.814	49.000	0.909	1.000	N	NA
3061024	3061025	VC274080_1383	VC274080_1382			TRUE	0.595	121.000	0.385	NA		NA
3061026	3061027	VC274080_1381	VC274080_1380		rimJ	FALSE	0.138	95.000	0.061	NA		NA
3061027	3061028	VC274080_1380	VC274080_1379	rimJ	tyrR	TRUE	0.803	0.000	0.122	1.000	N	NA
3061028	3061029	VC274080_1379	VC274080_1378	tyrR		FALSE	0.324	114.000	0.137	NA		NA
3061029	3061030	VC274080_1378	VC274080_1377			TRUE	0.796	63.000	0.791	NA		NA
3061030	3061031	VC274080_1377	VC274080_1376			FALSE	0.009	225.000	0.026	NA		NA
3061031	3061032	VC274080_1376	VC274080_1375			FALSE	0.049	149.000	0.027	NA		NA
3061033	3061034	VC274080_1374	VC274080_1373	pabB		FALSE	0.058	197.000	0.169	1.000	N	NA
3061034	3061035	VC274080_1373	VC274080_1372		sdaC-1	FALSE	0.000	299.000	0.049	1.000	N	NA
3061035	3061036	VC274080_1372	VC274080_1371	sdaC-1	sdaA-1	TRUE	0.835	93.000	0.567	1.000	Y	NA
3061038	3061039	VC274080_1369	VC274080_1368		asnS	FALSE	0.012	102.000	0.021	1.000	N	NA
3061041	3061042	VC274080_1366	VC274080_1365			TRUE	0.922	-28.000	0.267	NA		NA
3061042	3061043	VC274080_1365	VC274080_1364		aspC	FALSE	0.046	161.000	0.048	NA		NA
3061043	3061044	VC274080_1364	VC274080_1363	aspC		FALSE	0.004	281.000	0.000	1.000	N	NA
3061044	3061045	VC274080_1363	VC274080_1362			TRUE	0.929	-3.000	0.261	1.000	N	NA
3061047	3061048	VC274080_1360	VC274080_1359	mdoG	mdoH	FALSE	0.438	19.000	0.102	NA	N	NA
3061049	3061050	VC274080_1358	VC274080_1357			TRUE	0.701	101.000	0.600	1.000		NA
3061050	3061051	VC274080_1357	VC274080_1356		celF	TRUE	0.979	23.000	1.000	0.018		NA
3061051	3061052	VC274080_1356	VC274080_1355	celF	celC	TRUE	0.988	-18.000	0.800	1.000	Y	NA
3061052	3061053	VC274080_1355	VC274080_1354	celC	celB	TRUE	0.954	47.000	0.364	0.008	Y	NA
3061053	3061054	VC274080_1354	VC274080_1353	celB	celA	TRUE	0.932	79.000	0.364	0.008	Y	NA
3061058	3061059	VC274080_1349	VC274080_1348			TRUE	0.990	-19.000	0.263	0.026	Y	NA
3061059	3061060	VC274080_1348	VC274080_1347			TRUE	0.765	107.000	0.354	0.069	N	NA
3061060	3061061	VC274080_1347	VC274080_1346			TRUE	0.990	10.000	0.827	1.000	Y	NA
3061061	3061062	VC274080_1346	VC274080_1345			TRUE	0.633	102.000	0.154	1.000	Y	NA
3061062	3061063	VC274080_1345	VC274080_1344			FALSE	0.002	741.000	0.000	NA		NA
3061064	3061065	VC274080_2814	VC274080_2813	add		FALSE	0.328	92.000	0.189	1.000	N	NA
3061065	3061066	VC274080_2813	VC274080_2812		ntrC	TRUE	0.622	41.000	0.046	1.000	Y	NA
3061066	3061067	VC274080_2812	VC274080_B0046	ntrC		TRUE	0.678	-1043.000	0.000	NA		NA
3061067	3061068	VC274080_B0046	VC274080_2811		ntrB	FALSE	0.262	56.000	0.000	NA		NA
3061068	3061069	VC274080_2811	VC274080_2810	ntrB		FALSE	0.360	133.000	0.188	NA		NA
3061069	3061070	VC274080_2810	VC274080_2809		glnA	FALSE	0.027	178.000	0.044	NA		NA
3061070	3061071	VC274080_2809	VC274080_2808	glnA		FALSE	0.062	143.000	0.007	NA		NA
3061072	3061073	VC274080_2807	VC274080_2806	typA		FALSE	0.080	83.000	0.013	1.000		NA
3061073	3061074	VC274080_2806	VC274080_2805		yihY	FALSE	0.205	27.000	0.020	1.000		NA
3061074	3061075	VC274080_2805	VC274080_2804	yihY		FALSE	0.499	18.000	0.069	1.000		NA
3061075	3061076	VC274080_2804	VC274080_2803			FALSE	0.152	67.000	0.065	1.000		NA
3061077	3061078	VC274080_2802	VC274080_2801		pckA	FALSE	0.018	187.000	0.027	NA		NA
3061078	3061079	VC274080_2801	VC274080_2800	pckA		FALSE	0.000	337.000	0.048	1.000	N	NA
3061079	3061080	VC274080_2800	VC274080_2799			TRUE	0.609	19.000	0.140	1.000	N	NA
3061081	3061082	VC274080_2798	VC274080_2797	epsC	gspD	TRUE	0.968	46.000	0.575	0.005	Y	NA
3061082	3061083	VC274080_2797	VC274080_2796	gspD	epsE	TRUE	0.998	6.000	0.776	0.005	Y	NA
3061083	3061084	VC274080_2796	VC274080_2795	epsE	epsF	TRUE	0.997	0.000	0.653	0.005	Y	NA
3061084	3061085	VC274080_2795	VC274080_2794	epsF	epsG	TRUE	0.973	41.000	0.599	0.005	Y	NA
3061085	3061086	VC274080_2794	VC274080_2793	epsG	epsH	TRUE	0.925	34.000	0.087	0.005	Y	NA
3061086	3061087	VC274080_2793	VC274080_2792	epsH	epsI	TRUE	0.974	-10.000	0.132	0.005		NA
3061087	3061088	VC274080_2792	VC274080_2791	epsI	epsJ	TRUE	0.991	-13.000	0.569	0.005		NA
3061088	3061089	VC274080_2791	VC274080_2790	epsJ	epsK	TRUE	0.983	-10.000	0.461	1.000	Y	NA
3061089	3061090	VC274080_2790	VC274080_2789	epsK	epsL	TRUE	0.992	-31.000	0.537	0.069	Y	NA
3061090	3061091	VC274080_2789	VC274080_2788	epsL	epsM	TRUE	0.992	7.000	0.811	1.000	Y	NA
3061091	3061092	VC274080_2788	VC274080_2787	epsM	epsN	TRUE	0.980	2.000	0.649	1.000		NA
3061093	3061094	VC274080_2786	VC274080_2785	cysQ		TRUE	0.915	-55.000	0.373	1.000	N	NA
3061094	3061095	VC274080_2785	VC274080_2784			FALSE	0.132	73.000	0.059	1.000		NA
3061095	3061096	VC274080_2784	VC274080_2783			FALSE	0.145	88.000	0.066	1.000		NA
3061097	3061098	VC274080_2782	VC274080_2781		bioH	FALSE	0.227	66.000	0.000	NA		NA
3061098	3061099	VC274080_2781	VC274080_2780	bioH		FALSE	0.091	136.000	0.053	NA		NA
3061101	3061102	VC274080_2778	VC274080_2777	greB	ompR	TRUE	0.681	138.000	0.067	0.047	Y	NA
3061102	3061103	VC274080_2777	VC274080_2776	ompR	envZ	TRUE	0.853	69.000	0.584	1.000	Y	NA
3061104	3061105	VC274080_2775	VC274080_2774		recG	FALSE	0.000	309.000	0.009	1.000	N	NA
3061105	3061106	VC274080_2774	VC274080_2773	recG	spoT	FALSE	0.424	119.000	0.034	1.000	Y	NA
3061106	3061107	VC274080_2773	VC274080_2772	spoT	rpoZ	TRUE	0.889	32.000	0.291	1.000	Y	NA
3061107	3061108	VC274080_2772	VC274080_2771	rpoZ	gmk	TRUE	0.590	108.000	0.471	1.000	N	NA
3061110	3061111	VC274080_2769	VC274080_2768			TRUE	0.978	11.000	0.916	NA		NA
3061113	3061114	VC274080_2766	VC274080_2765		dsbD	FALSE	0.018	173.000	0.084	1.000	N	NA
3061114	3061115	VC274080_2765	VC274080_2764	dsbD	pulA	FALSE	0.042	160.000	0.048	1.000		NA
3061115	3061116	VC274080_2764	VC274080_2763	pulA		TRUE	0.959	-3.000	0.042	0.018		NA
3061116	3061117	VC274080_2763	VC274080_2762		dcuA	FALSE	0.004	394.000	0.000	1.000		NA
3061117	3061118	VC274080_2762	VC274080_2761	dcuA	aspA	FALSE	0.444	80.000	0.195	1.000		NA
3061119	3061120	VC274080_2760	VC274080_2759		fsxA	FALSE	0.087	92.000	0.017	NA		NA
3061121	3061122	VC274080_2758	VC274080_2757		sodA	FALSE	0.018	53.000	0.045	1.000	N	NA
3061122	3061123	VC274080_2757	VC274080_2756	sodA	cpxA	FALSE	0.284	82.000	0.162	1.000	N	NA
3061123	3061124	VC274080_2756	VC274080_2755	cpxA	cpxR	TRUE	0.993	0.000	0.791	1.000	Y	NA
3061125	3061126	VC274080_A0958	VC274080_A0959	hutB		TRUE	0.987	12.000	0.852	1.000	Y	NA
3061126	3061127	VC274080_A0959	VC274080_A0960		hutD	TRUE	0.938	0.000	0.029	1.000	Y	NA
3061129	3061130	VC274080_A0962	VC274080_A0963			FALSE	0.033	203.000	0.000	NA		NA
3061132	3061133	VC274080_A0965	VC274080_A0966			TRUE	0.712	63.000	0.500	NA		NA
3061137	3061138	VC274080_A0970	VC274080_A0971			TRUE	0.951	-3.000	0.273	NA		NA
3061139	3061140	VC274080_A0972	VC274080_A0973			FALSE	0.031	165.000	0.025	NA		NA
3061140	3061141	VC274080_A0973	VC274080_A0974			FALSE	0.285	23.000	0.025	NA		NA
3061142	3061143	VC274080_A0975	VC274080_A0976			FALSE	0.003	565.000	0.000	NA		NA
3061143	3061144	VC274080_A0976	VC274080_A0978			FALSE	0.028	212.000	0.000	NA		NA
3061146	3061147	VC274080_A0979	VC274080_A0980			TRUE	0.657	119.000	0.667	NA	N	NA
3061147	3061148	VC274080_A0980	VC274080_A0981			FALSE	0.251	152.000	0.048	0.080	N	NA
3061148	3061149	VC274080_A0981	VC274080_A0982			FALSE	0.004	164.000	0.038	NA	N	NA
3061149	3061150	VC274080_A0982	VC274080_A0983			FALSE	0.092	84.000	0.025	NA		NA
3061151	3061152	VC274080_A0984	VC274080_A0985	malG	malF	TRUE	0.995	12.000	0.814	0.051	Y	NA
3061152	3061153	VC274080_A0985	VC274080_A0986	malF	malE	TRUE	0.598	75.000	0.120	1.000	Y	NA
3061154	3061155	VC274080_A0987	VC274080_A0988		malK	FALSE	0.003	517.000	0.000	NA		NA
3061155	3061156	VC274080_A0988	VC274080_A0989	malK	speG	FALSE	0.008	222.000	0.000	1.000	N	NA
3061156	3061157	VC274080_A0989	VC274080_A0990	speG		FALSE	0.184	5.000	0.041	NA	N	NA
3061160	3061161	VC274080_A0993	VC274080_A0994		ppiC	FALSE	0.002	577.000	0.000	1.000		NA
3061167	3061168	VC274080_A1000	VC274080_A1001			FALSE	0.317	26.000	0.051	NA		NA
3061169	3061170	VC274080_A1002	VC274080_A1003			FALSE	0.039	287.000	0.235	NA		NA
3061172	3061173	VC274080_A1005	VC274080_A1006			FALSE	0.135	152.000	0.150	1.000	N	NA
3061182	3061183	VC274080_A1015	VC274080_A1016			FALSE	0.161	48.000	0.044	NA		NA
3061184	3061185	VC274080_A1017	VC274080_A1018			TRUE	0.857	29.000	0.500	NA		NA
3061186	3061187	VC274080_A1019	VC274080_A1020			TRUE	0.959	20.000	0.500	1.000	Y	NA
3061187	3061188	VC274080_A1020	VC274080_A1021			FALSE	0.010	794.000	0.000	1.000	Y	NA
3061188	3061189	VC274080_A1021	VC274080_A1022			FALSE	0.037	154.000	0.000	1.000	N	NA
3061189	3061190	VC274080_A1022	VC274080_A1023			FALSE	0.201	100.000	0.000	NA		NA
3061191	3061192	VC274080_A1024	VC274080_A1025		lldD	FALSE	0.528	123.000	0.109	1.000	Y	NA
3061193	3061194	VC274080_A0252	VC274080_A0251		vctP	TRUE	0.689	53.000	0.356	1.000		NA
3061194	3061195	VC274080_A0251	VC274080_A0250	vctP		FALSE	0.007	316.000	0.000	1.000		NA
3061196	3061197	VC274080_A0249	VC274080_A0248		prtV	FALSE	0.458	85.000	0.200	NA		NA
3061198	3061199	VC274080_A0247	VC274080_A0246		hlyC	TRUE	0.970	10.000	0.587	1.000		NA
3061199	3061200	VC274080_A0246	VC274080_A0245	hlyC	hylB	FALSE	0.012	267.000	0.000	1.000		NA
3061200	3061201	VC274080_A0245	VC274080_A0244	hylB	hlyA	FALSE	0.009	299.000	0.000	1.000		NA
3061202	3061203	VC274080_A0243	VC274080_A0242			FALSE	0.003	605.000	0.000	NA		NA
3061203	3061204	VC274080_A0242	VC274080_A0240			FALSE	0.344	121.000	0.214	1.000	N	NA
3061206	3061207	VC274080_A0239	VC274080_A0238		emrD-2	TRUE	0.878	1.000	0.114	NA		NA
3061207	3061208	VC274080_A0238	VC274080_A0237	emrD-2		FALSE	0.016	395.000	0.000	0.068	N	NA
3061211	3061212	VC274080_A0234	VC274080_A0233			FALSE	0.001	240.000	0.005	1.000	N	NA
3061213	3061214	VC274080_A0232	VC274080_A0231	nadE		TRUE	0.600	9.000	0.013	NA		NA
3061214	3061215	VC274080_A0231	VC274080_A0230		dcuB	FALSE	0.107	111.000	0.044	NA		NA
3061215	3061216	VC274080_A0230	VC274080_A0229	dcuB	rhlE-2	FALSE	0.028	190.000	0.066	1.000		NA
3061216	3061217	VC274080_A0229	VC274080_A0228	rhlE-2	tnpA	FALSE	0.014	505.000	0.000	1.000	Y	NA
3061218	3061219	VC274080_A0227	VC274080_A0226			TRUE	0.846	-3.000	0.104	NA		NA
3061219	3061220	VC274080_A0226	VC274080_A0225			TRUE	0.946	-7.000	0.292	NA		NA
3061220	3061221	VC274080_A0225	VC274080_A0224			FALSE	0.441	124.000	0.222	NA		NA
3061221	3061222	VC274080_A0224	VC274080_A0223		guaC	FALSE	0.002	324.000	0.000	1.000	N	NA
3061222	3061223	VC274080_A0223	VC274080_A0222	guaC		FALSE	0.004	409.000	0.000	NA		NA
3061224	3061225	VC274080_A0221	VC274080_A0220			TRUE	0.733	66.000	0.600	1.000		NA
3061228	3061229	VC274080_A0218	VC274080_A0216			FALSE	0.151	38.000	0.013	1.000		NA
3061229	3061230	VC274080_A0216	VC274080_A0215			TRUE	0.994	0.000	0.902	0.079		NA
3061230	3061231	VC274080_A0215	VC274080_A0214			FALSE	0.254	87.000	0.105	NA		NA
3061233	3061234	VC274080_A0212	VC274080_A0211			FALSE	0.004	388.000	0.000	NA		NA
3061238	3061239	VC274080_A0208	VC274080_A0206		pepT	FALSE	0.004	172.000	0.044	NA	N	NA
3061243	3061244	VC274080_A0202	VC274080_A0201			TRUE	0.611	57.000	0.286	1.000		NA
3061244	3061245	VC274080_A0201	VC274080_A0200			FALSE	0.554	35.000	0.143	NA		NA
3061246	3061247	VC274080_A0199	VC274080_A0198			TRUE	0.974	4.000	0.500	NA		NA
3061247	3061248	VC274080_A0198	VC274080_A0197			TRUE	0.981	-3.000	0.738	NA		NA
3061248	3061249	VC274080_A0197	VC274080_A0196			TRUE	0.952	-13.000	0.370	NA		NA
3061249	3061250	VC274080_A0196	VC274080_A0195			TRUE	0.813	2.000	0.082	NA		NA
3061250	3061251	VC274080_A0195	VC274080_A0194			TRUE	0.887	-6.000	0.143	NA		NA
3061251	3061252	VC274080_A0194	VC274080_A0193			FALSE	0.090	89.000	0.026	NA		NA
3061253	3061254	VC274080_2189	VC274080_2188	hemK		TRUE	0.869	0.000	0.109	NA		NA
3061254	3061255	VC274080_2188	VC274080_2187			TRUE	0.838	16.000	0.195	NA		NA
3061255	3061256	VC274080_2187	VC274080_2186		kdsA	FALSE	0.544	20.000	0.089	1.000		NA
3061256	3061257	VC274080_2186	VC274080_2185	kdsA	ushA	FALSE	0.001	542.000	0.000	1.000	N	NA
3061257	3061258	VC274080_2185	VC274080_2184	ushA		TRUE	0.782	7.000	0.078	NA		NA
3061258	3061259	VC274080_2184	VC274080_2183			FALSE	0.462	14.000	0.008	NA		NA
3061262	3061263	VC274080_2180	VC274080_2179		wrbA	TRUE	0.980	3.000	0.657	NA		NA
3061263	3061264	VC274080_2179	VC274080_2178	wrbA	arsC	TRUE	0.984	-3.000	0.253	0.041		NA
3061264	3061265	VC274080_2178	VC274080_2177	arsC		TRUE	0.812	23.000	0.259	1.000		NA
3061266	3061267	VC274080_2176	VC274080_2175			TRUE	0.916	-7.000	0.190	NA		NA
3061267	3061268	VC274080_2175	VC274080_2174			FALSE	0.017	191.000	0.029	NA		NA
3061269	3061270	VC274080_2173	VC274080_2172	bcp		FALSE	0.487	15.000	0.102	1.000	N	NA
3061271	3061272	VC274080_2171	VC274080_2170	dapA	nlpB	TRUE	0.792	58.000	0.267	NA	Y	NA
3061273	3061274	VC274080_2169	VC274080_2168			TRUE	0.938	-10.000	0.273	NA		NA
3061274	3061275	VC274080_2168	VC274080_2167		dapE	TRUE	0.974	3.000	0.163	0.028	N	NA
3061275	3061276	VC274080_2167	VC274080_2166	dapE		TRUE	0.705	31.000	0.292	1.000	N	NA
3061279	3061280	VC274080_2163	VC274080_2162			FALSE	0.540	66.000	0.241	NA		NA
3061280	3061281	VC274080_2162	VC274080_2161		flaE	FALSE	0.370	124.000	0.238	1.000	N	NA
3061281	3061282	VC274080_2161	VC274080_2160	flaE	flaD	FALSE	0.193	290.000	0.000	0.002	Y	NA
3061282	3061283	VC274080_2160	VC274080_2159	flaD	flaB	FALSE	0.313	236.000	0.000	0.002	Y	NA
3061283	3061284	VC274080_2159	VC274080_2158	flaB	flaG	FALSE	0.480	74.000	0.043	NA	Y	NA
3061284	3061285	VC274080_2158	VC274080_2157	flaG	fliD	TRUE	0.802	22.000	0.053	NA	Y	NA
3061285	3061286	VC274080_2157	VC274080_2156	fliD		TRUE	0.944	22.000	1.000	NA		NA
3061286	3061287	VC274080_2156	VC274080_2155		fliS	TRUE	0.963	11.000	0.533	NA		NA
3061287	3061288	VC274080_2155	VC274080_2154	fliS	flrA	FALSE	0.001	232.000	0.022	1.000	N	NA
3061288	3061289	VC274080_2154	VC274080_2153	flrA	flrB	TRUE	0.902	112.000	0.377	0.079	Y	NA
3061289	3061290	VC274080_2153	VC274080_2152	flrB	flrC	TRUE	0.996	-3.000	0.679	0.079	Y	NA
3061290	3061291	VC274080_2152	VC274080_2151	flrC	fliE	TRUE	0.640	58.000	0.446	1.000	N	NA
3061291	3061292	VC274080_2151	VC274080_2150	fliE	fliF	TRUE	0.994	16.000	0.910	0.006	Y	NA
3061292	3061293	VC274080_2150	VC274080_2149	fliF	fliG	TRUE	0.971	23.000	0.189	0.006	Y	NA
3061293	3061294	VC274080_2149	VC274080_2148	fliG		TRUE	0.930	81.000	0.320	0.004	Y	NA
3061294	3061295	VC274080_2148	VC274080_2147		fliI	TRUE	0.995	4.000	0.248	0.004	Y	NA
3061295	3061296	VC274080_2147	VC274080_2146	fliI		TRUE	0.977	15.000	0.127	0.009	Y	NA
3061298	3061299	VC274080_2144	VC274080_2143			TRUE	0.828	35.000	0.182	1.000	Y	NA
3061299	3061300	VC274080_2143	VC274080_2142		fliM	TRUE	0.995	8.000	0.241	0.001	Y	NA
3061300	3061301	VC274080_2142	VC274080_2141	fliM	fliN	TRUE	0.970	70.000	0.741	0.001	Y	NA
3061301	3061302	VC274080_2141	VC274080_2139	fliN	fliO	TRUE	0.987	4.000	0.443	1.000	Y	NA
3061302	3061303	VC274080_2139	VC274080_2138	fliO	fliP	TRUE	0.940	-22.000	0.122	1.000	Y	NA
3061305	3061306	VC274080_2137	VC274080_2136	fliQ	fliR	TRUE	0.998	9.000	0.719	0.002	Y	NA
3061306	3061307	VC274080_2136	VC274080_2135	fliR	flhB	TRUE	0.973	10.000	0.240	1.000	Y	NA
3061309	3061310	VC274080_2133	VC274080_2132		aroC	FALSE	0.005	230.000	0.081	1.000	N	NA
3061312	3061313	VC274080_2130	VC274080_2129			TRUE	0.784	39.000	0.425	NA		NA
3061313	3061314	VC274080_2129	VC274080_2128			FALSE	0.039	208.000	0.106	NA		NA
3061316	3061317	VC274080_2126	VC274080_2125	fabB	pdxB	FALSE	0.006	186.000	0.069	1.000	N	NA
3061317	3061318	VC274080_2125	VC274080_2124	pdxB		TRUE	0.983	-19.000	0.097	0.008	Y	NA
3061320	3061321	VC274080_A0114	VC274080_A0115			FALSE	0.229	101.000	0.100	NA		NA
3061321	3061322	VC274080_A0115	VC274080_A0116			TRUE	0.673	74.000	0.471	NA		NA
3061327	3061328	VC274080_A0120	VC274080_A0122			FALSE	0.302	30.000	0.057	NA		NA
3061329	3061330	VC274080_A0123	VC274080_A0124			FALSE	0.022	228.000	0.000	NA		NA
3061330	3061331	VC274080_A0124	VC274080_A0125			FALSE	0.012	269.000	0.000	NA		NA
3061331	3061332	VC274080_A0125	VC274080_A0126			TRUE	0.835	43.000	0.700	NA		NA
3061334	3061335	VC274080_A0128	VC274080_A0129	pncB		FALSE	0.181	31.000	0.021	1.000		NA
3061336	3061337	VC274080_A0130	VC274080_A0131	pspE		TRUE	0.840	0.000	0.130	NA	N	NA
3061337	3061338	VC274080_A0131	VC274080_A0132			FALSE	0.218	176.000	0.278	NA		NA
3061341	3061342	VC274080_A0135	VC274080_A0136			TRUE	0.950	-85.000	0.545	NA		NA
3061342	3061343	VC274080_A0136	VC274080_A0137			FALSE	0.004	432.000	0.000	NA		NA
3061343	3061344	VC274080_A0137	VC274080_A0138			TRUE	0.866	41.000	0.821	NA		NA
3061344	3061345	VC274080_A0138	VC274080_A0139			TRUE	0.980	3.000	0.627	NA		NA
3061345	3061346	VC274080_A0139	VC274080_A0140			TRUE	0.975	6.000	0.552	NA		NA
3061346	3061347	VC274080_A0140	VC274080_A0141			TRUE	0.918	27.000	0.863	NA		NA
3061347	3061348	VC274080_A0141	VC274080_A0142			TRUE	0.699	69.000	0.510	NA		NA
3061348	3061349	VC274080_A0142	VC274080_A0143			TRUE	0.985	3.000	0.862	NA		NA
3061349	3061350	VC274080_A0143	VC274080_A0144			TRUE	0.982	7.000	0.765	NA		NA
3061350	3061351	VC274080_A0144	VC274080_A0145			TRUE	0.981	3.000	0.673	NA		NA
3061351	3061352	VC274080_A0145	VC274080_A0146		clpB-2	TRUE	0.867	26.000	0.471	NA		NA
3061352	3061353	VC274080_A0146	VC274080_A0147	clpB-2		TRUE	0.969	3.000	0.118	0.016	N	NA
3061353	3061354	VC274080_A0147	VC274080_A0148			TRUE	0.862	-30.000	0.158	NA		NA
3061354	3061355	VC274080_A0148	VC274080_A0149			TRUE	0.976	10.000	0.711	NA		NA
3061355	3061356	VC274080_A0149	VC274080_A0150			TRUE	0.953	16.000	0.750	NA		NA
3061356	3061357	VC274080_A0150	VC274080_A0151			TRUE	0.650	48.000	0.281	NA		NA
3061357	3061358	VC274080_A0151	VC274080_A0152		vgrG-3	FALSE	0.014	253.000	0.000	1.000		NA
3061358	3061359	VC274080_A0152	VC274080_A0153	vgrG-3		TRUE	0.965	-3.000	0.375	NA		NA
3061360	3061361	VC274080_A0154	VC274080_A0155			FALSE	0.157	101.000	0.069	NA		NA
3061362	3061363	VC274080_A0156	VC274080_A0157	rbsD	rbsA	TRUE	0.918	27.000	0.337	1.000	Y	NA
3061363	3061364	VC274080_A0157	VC274080_A0158	rbsA		TRUE	0.993	15.000	0.504	0.002	Y	NA
3061364	3061365	VC274080_A0158	VC274080_A0159		rbsB	TRUE	0.977	55.000	0.847	0.002	Y	NA
3061365	3061366	VC274080_A0159	VC274080_A0160	rbsB	rbsK	TRUE	0.701	139.000	0.347	1.000	Y	NA
3061366	3061367	VC274080_A0160	VC274080_A0161	rbsK	rbsR	TRUE	0.949	11.000	0.500	1.000	N	NA
3061367	3061368	VC274080_A0161	VC274080_A0162	rbsR	pnuC	FALSE	0.025	126.000	0.068	1.000	N	NA
3061368	3061369	VC274080_A0162	VC274080_A0163	pnuC	udp-2	TRUE	0.916	-3.000	0.227	1.000	N	NA
3061369	3061370	VC274080_A0163	VC274080_A0164	udp-2		FALSE	0.368	140.000	0.294	NA	N	NA
3061371	3061372	VC274080_A0165	VC274080_A0166	glpQ	glpT	TRUE	0.881	106.000	0.396	0.001	N	NA
3061372	3061373	VC274080_A0166	VC274080_A0167	glpT		FALSE	0.005	375.000	0.000	NA		NA
3061374	3061375	VC274080_2122	VC274080_2121	seqA	pgm	FALSE	0.262	109.000	0.151	NA	N	NA
3061379	3061380	VC274080_2117	VC274080_2116	sdhC	sdhD	TRUE	0.997	-6.000	0.453	0.001	Y	NA
3061380	3061381	VC274080_2116	VC274080_2115	sdhD	sdhA	TRUE	0.998	1.000	0.705	0.003	Y	NA
3061381	3061382	VC274080_2115	VC274080_2114	sdhA	sdhB	TRUE	0.993	15.000	0.604	0.003	Y	NA
3061382	3061383	VC274080_2114	VC274080_2113	sdhB	sucA	FALSE	0.498	89.000	0.067	1.000	Y	NA
3061383	3061384	VC274080_2113	VC274080_2112	sucA	sucB	TRUE	0.946	29.000	0.667	1.000	Y	NA
3061384	3061385	VC274080_2112	VC274080_2111	sucB	sucC	FALSE	0.335	168.000	0.136	1.000	Y	NA
3061385	3061386	VC274080_2111	VC274080_2110	sucC	sucD	TRUE	0.998	0.000	0.806	0.001	Y	NA
3061387	3061388	VC274080_2109	VC274080_2108	znuB	znuC	TRUE	0.990	-7.000	0.755	1.000	Y	NA
3061389	3061390	VC274080_2107	VC274080_2106	znuA		FALSE	0.003	182.000	0.040	1.000	N	NA
3061390	3061391	VC274080_2106	VC274080_2105		feoA	FALSE	0.001	772.000	0.000	1.000	N	NA
3061391	3061392	VC274080_2105	VC274080_2104	feoA	feoB	TRUE	0.992	-3.000	0.778	1.000	Y	NA
3061392	3061393	VC274080_2104	VC274080_2103	feoB		TRUE	0.954	-3.000	0.288	NA		NA
3061394	3061395	VC274080_2102	VC274080_2101		argS	FALSE	0.013	91.000	0.012	1.000	N	NA
3061398	3061399	VC274080_2098	VC274080_2097	sixA	flhA	FALSE	0.002	332.000	0.000	1.000	N	NA
3061399	3061400	VC274080_2097	VC274080_2096	flhA		TRUE	0.825	35.000	0.178	1.000	Y	NA
3061400	3061401	VC274080_2096	VC274080_2095			TRUE	0.968	-40.000	0.241	0.016	N	NA
3061401	3061402	VC274080_2095	VC274080_2094		fliA	TRUE	0.955	-7.000	0.482	1.000	N	NA
3061402	3061403	VC274080_2094	VC274080_2093	fliA	cheY-3	TRUE	0.920	22.000	0.283	0.078	N	NA
3061403	3061404	VC274080_2093	VC274080_2092	cheY-3	cheZ	TRUE	0.870	56.000	0.516	1.000	Y	NA
3061404	3061405	VC274080_2092	VC274080_2091	cheZ	cheA-2	TRUE	0.980	10.000	0.341	1.000	Y	NA
3061405	3061406	VC274080_2091	VC274080_2090	cheA-2	cheB-2	TRUE	0.970	27.000	0.327	0.022	Y	NA
3061406	3061407	VC274080_2090	VC274080_2089	cheB-2		TRUE	0.849	10.000	0.170	1.000	N	NA
3061407	3061408	VC274080_2089	VC274080_2088			TRUE	0.963	-7.000	0.454	1.000		NA
3061408	3061409	VC274080_2088	VC274080_2087		cheW-1	TRUE	0.994	9.000	0.886	0.022		NA
3061409	3061410	VC274080_2087	VC274080_2086	cheW-1		TRUE	0.803	-24.000	0.114	NA		NA
3061410	3061411	VC274080_2086	VC274080_2085		ccmA	FALSE	0.005	374.000	0.000	NA		NA
3061411	3061412	VC274080_2085	VC274080_2084	ccmA	ccmB	TRUE	0.990	-3.000	0.074	0.002	Y	NA
3061412	3061413	VC274080_2084	VC274080_2083	ccmB	ccmC	TRUE	0.856	91.000	0.054	0.001	Y	NA
3061413	3061414	VC274080_2083	VC274080_2082	ccmC	ccmD	TRUE	0.968	0.000	0.501	1.000	N	NA
3061414	3061415	VC274080_2082	VC274080_2081	ccmD	ccmE	TRUE	0.949	-3.000	0.344	1.000	N	NA
3061415	3061416	VC274080_2081	VC274080_2080	ccmE	ccmF	TRUE	0.995	-3.000	0.211	0.002	Y	NA
3061416	3061417	VC274080_2080	VC274080_2079	ccmF	dsbE	TRUE	0.998	1.000	0.804	0.002	Y	NA
3061417	3061418	VC274080_2079	VC274080_2078	dsbE	ccmH	TRUE	0.989	-3.000	0.578	NA	Y	NA
3061418	3061419	VC274080_2078	VC274080_2077	ccmH		TRUE	0.992	3.000	0.727	NA	Y	NA
3061419	3061420	VC274080_2077	VC274080_2076		vacJ	FALSE	0.514	53.000	0.239	NA	N	NA
3061421	3061422	VC274080_2075	VC274080_2074			FALSE	0.014	362.000	0.175	NA		NA
3061422	3061423	VC274080_2074	VC274080_2073			FALSE	0.092	82.000	0.024	NA		NA
3061425	3061426	VC274080_1728	VC274080_1729	cls	metC	FALSE	0.148	81.000	0.110	1.000	N	NA
3061427	3061428	VC274080_1730	VC274080_1731	tag		FALSE	0.013	87.000	0.006	1.000	N	NA
3061428	3061429	VC274080_1731	VC274080_1732			TRUE	0.825	-7.000	0.150	1.000	N	NA
3061429	3061430	VC274080_1732	VC274080_1733			TRUE	0.998	2.000	0.950	0.008	Y	NA
3061430	3061431	VC274080_1733	VC274080_1734		pspC	FALSE	0.074	172.000	0.133	NA	N	NA
3061431	3061432	VC274080_1734	VC274080_1735	pspC	pspB	TRUE	0.981	-7.000	0.913	NA		NA
3061432	3061433	VC274080_1735	VC274080_1736	pspB	pspA	TRUE	0.960	14.000	0.739	NA		NA
3061434	3061435	VC274080_1737	VC274080_1738	pspF	sapA	FALSE	0.553	114.000	0.402	1.000	N	NA
3061435	3061436	VC274080_1738	VC274080_1739	sapA	sapB	TRUE	0.975	0.000	0.195	0.050	N	NA
3061436	3061437	VC274080_1739	VC274080_1740	sapB	sapC	TRUE	0.988	-13.000	0.210	0.050	Y	NA
3061437	3061438	VC274080_1740	VC274080_1741	sapC	sapD	TRUE	0.991	0.000	0.667	1.000	Y	NA
3061438	3061439	VC274080_1741	VC274080_1742	sapD	sapF	TRUE	0.997	-3.000	0.684	0.018	Y	NA
3061439	3061440	VC274080_1742	VC274080_1743	sapF		TRUE	0.863	1.000	0.105	NA		NA
3061441	3061442	VC274080_1744	VC274080_1745			FALSE	0.507	-30.000	0.028	NA		NA
3061444	3061445	VC274080_1747	VC274080_1748			FALSE	0.014	259.000	0.000	NA		NA
3061445	3061446	VC274080_1748	VC274080_1749			FALSE	0.239	61.000	0.089	NA		NA
3061446	3061447	VC274080_1749	VC274080_1750		torA	TRUE	0.895	27.000	0.667	NA		NA
3061447	3061448	VC274080_1750	VC274080_1751	torA	torC	TRUE	0.987	24.000	0.857	0.040	Y	NA
3061448	3061449	VC274080_1751	VC274080_1752	torC	torE	TRUE	0.791	47.000	0.207	NA	Y	NA
3061449	3061450	VC274080_1752	VC274080_1753	torE		FALSE	0.009	301.000	0.000	NA		NA
3061450	3061451	VC274080_1753	VC274080_1754			FALSE	0.031	206.000	0.000	NA		NA
3061452	3061453	VC274080_1755	VC274080_1756			FALSE	0.076	104.000	0.015	1.000		NA
3061453	3061454	VC274080_1756	VC274080_1757			FALSE	0.583	-7.000	0.026	NA		NA
3061454	3061455	VC274080_1757	VC274080_1758			FALSE	0.077	133.000	0.040	NA		NA
3061455	3061456	VC274080_1758	VC274080_1759		yciB	FALSE	0.020	233.000	0.000	NA		NA
3061456	3061457	VC274080_1759	VC274080_1760	yciB		FALSE	0.214	138.000	0.167	NA	N	NA
3061457	3061458	VC274080_1760	VC274080_1761			FALSE	0.284	75.000	0.114	NA		NA
3061458	3061459	VC274080_1761	VC274080_1762			TRUE	0.603	-91.000	0.067	NA		NA
3061462	3061463	VC274080_1765	VC274080_1766			TRUE	0.673	114.000	0.516	NA		NA
3061469	3061470	VC274080_1772	VC274080_1773	mukB	mukE	TRUE	0.998	-3.000	1.000	0.001	Y	NA
3061470	3061471	VC274080_1773	VC274080_1774	mukE	mukF	TRUE	0.765	-40.000	0.107	NA		NA
3061475	3061476	VC274080_A1071	VC274080_A1070			FALSE	0.128	79.000	0.052	NA		NA
3061479	3061480	VC274080_A1067	VC274080_A1066		ogt	TRUE	0.957	39.000	0.217	0.002	Y	NA
3061480	3061481	VC274080_A1066	VC274080_A1065	ogt		TRUE	0.877	11.000	0.156	NA		NA
3061483	3061484	VC274080_A1063	VC274080_A1062			TRUE	0.985	-3.000	0.159	0.002		NA
3061485	3061486	VC274080_A1061	VC274080_A1060			FALSE	0.039	27.000	0.035	NA	N	NA
3061486	3061487	VC274080_A1060	VC274080_A1059			TRUE	0.806	16.000	0.167	NA		NA
3061487	3061488	VC274080_A1059	VC274080_A1058			TRUE	0.768	26.000	0.235	NA		NA
3061488	3061489	VC274080_A1058	VC274080_A1057			FALSE	0.005	256.000	0.000	1.000	N	NA
3061490	3061491	VC274080_A1056	VC274080_A1055			FALSE	0.012	116.000	0.036	1.000	N	NA
3061492	3061493	VC274080_A1054	VC274080_A1053			TRUE	0.978	-3.000	0.651	NA		NA
3061493	3061494	VC274080_A1053	VC274080_A1052			FALSE	0.462	152.000	0.581	NA	N	NA
3061498	3061499	VC274080_A1048	VC274080_A1047			FALSE	0.299	131.000	0.150	NA		NA
3061501	3061502	VC274080_A1045	VC274080_A1044	nemA	grx2	TRUE	0.929	10.000	0.310	1.000	N	NA
3061506	3061507	VC274080_A1040	VC274080_A1039			FALSE	0.002	359.000	0.000	1.000	N	NA
3061507	3061508	VC274080_A1039	VC274080_A1038		ppsA	FALSE	0.003	183.000	0.015	1.000	N	NA
3061510	3061511	VC274080_A1036	VC274080_A1035			TRUE	0.836	98.000	0.145	0.040	Y	NA
3061511	3061512	VC274080_A1035	VC274080_A1034			FALSE	0.528	123.000	0.109	1.000	Y	NA
3061513	3061514	VC274080_A1033	VC274080_A1032			FALSE	0.201	100.000	0.000	NA		NA
3061514	3061515	VC274080_A1032	VC274080_A1031			FALSE	0.185	154.000	0.192	1.000	N	NA
3061515	3061516	VC274080_A1031	VC274080_A1030			TRUE	0.621	131.000	0.192	1.000	Y	NA
3061516	3061517	VC274080_A1030	VC274080_A1029			TRUE	0.973	20.000	0.800	1.000	Y	NA
3061518	3061519	VC274080_A1028	VC274080_A1027			TRUE	0.857	29.000	0.500	NA		NA
3061521	3061522	VC274080_1162	VC274080_1161			TRUE	0.982	-3.000	0.771	1.000		NA
3061522	3061523	VC274080_1161	VC274080_1160			TRUE	0.705	76.000	0.562	NA		NA
3061526	3061527	VC274080_1157	VC274080_1156	ackA-1	pta	TRUE	0.638	136.000	0.634	1.000		NA
3061528	3061529	VC274080_1155	VC274080_1154		oppF	FALSE	0.058	150.000	0.100	1.000	N	NA
3061529	3061530	VC274080_1154	VC274080_1153	oppF	oppD	TRUE	0.986	-21.000	0.099	0.002	Y	NA
3061530	3061531	VC274080_1153	VC274080_1152	oppD	oppC	TRUE	0.948	25.000	0.554	1.000	Y	NA
3061531	3061532	VC274080_1152	VC274080_1151	oppC	oppB	TRUE	0.993	14.000	0.870	0.049	Y	NA
3061532	3061533	VC274080_1151	VC274080_1150	oppB	oppA	TRUE	0.656	149.000	0.096	0.049	Y	NA
3061534	3061535	VC274080_1149	VC274080_1148			TRUE	0.892	4.000	0.176	NA	N	NA
3061536	3061537	VC274080_1147	VC274080_1146			TRUE	0.993	17.000	0.857	0.021	Y	NA
3061537	3061538	VC274080_1146	VC274080_1145			TRUE	0.992	0.000	0.750	1.000	Y	NA
3061538	3061539	VC274080_1145	VC274080_1144			TRUE	0.984	12.000	0.400	0.013		NA
3061539	3061540	VC274080_1144	VC274080_1143			TRUE	0.959	11.000	0.467	NA		NA
3061540	3061541	VC274080_1143	VC274080_1142			TRUE	0.992	-3.000	0.800	NA	Y	NA
3061541	3061542	VC274080_1142	VC274080_1141			TRUE	0.974	35.000	0.600	0.021	Y	NA
3061542	3061543	VC274080_1141	VC274080_1140			TRUE	0.990	-3.000	0.600	NA	Y	NA
3061544	3061545	VC274080_1139	VC274080_1138			TRUE	0.670	45.000	0.286	NA		NA
3061545	3061546	VC274080_1138	VC274080_1137			TRUE	0.659	79.000	0.444	NA		NA
3061547	3061548	VC274080_1136	VC274080_1135			TRUE	0.846	13.000	0.161	NA		NA
3061550	3061551	VC274080_1133	VC274080_1132			FALSE	0.009	302.000	0.000	NA		NA
3061551	3061552	VC274080_1132	VC274080_1131			FALSE	0.080	119.000	0.022	NA		NA
3061552	3061553	VC274080_1131	VC274080_1130			FALSE	0.166	39.000	0.089	NA	N	NA
3061553	3061554	VC274080_1130	VC274080_1129		gap	TRUE	0.757	14.000	0.167	1.000	N	NA
3061554	3061555	VC274080_1129	VC274080_1128	gap		FALSE	0.096	97.000	0.096	1.000	N	NA
3061555	3061556	VC274080_1128	VC274080_1127			FALSE	0.001	482.000	0.000	1.000	N	NA
3061556	3061557	VC274080_1127	VC274080_1126			TRUE	0.690	87.000	0.529	NA		NA
3061565	3061566	VC274080_1118	VC274080_1117			FALSE	0.244	60.000	0.000	NA		NA
3061570	3061571	VC274080_A0256	VC274080_A0257			FALSE	0.154	58.000	0.052	NA		NA
3061571	3061572	VC274080_A0257	VC274080_A0258		ackA	FALSE	0.012	270.000	0.000	NA		NA
3061572	3061573	VC274080_A0258	VC274080_A0259	ackA		FALSE	0.403	143.000	0.267	NA		NA
3061575	3061576	VC274080_A0261	VC274080_A0262			TRUE	0.980	-19.000	0.464	1.000	Y	NA
3061577	3061578	VC274080_A0263	VC274080_A0264			TRUE	0.969	-40.000	0.800	NA		NA
3061578	3061579	VC274080_A0264	VC274080_A0265			TRUE	0.983	12.000	0.600	1.000	Y	NA
3061579	3061580	VC274080_A0265	VC274080_A0266			TRUE	0.950	6.000	0.273	1.000		NA
3061580	3061581	VC274080_A0266	VC274080_A0267			TRUE	0.974	6.000	0.545	1.000		NA
3061581	3061582	VC274080_A0267	VC274080_A0268			TRUE	0.948	9.000	0.098	1.000	Y	NA
3061582	3061583	VC274080_A0268	VC274080_A0269		sgaT	TRUE	0.681	98.000	0.098	0.007		NA
3061584	3061585	VC274080_A0270	VC274080_A0271			FALSE	0.465	127.000	0.262	1.000		NA
3061586	3061587	VC274080_A0272	VC274080_A0273		amy1	FALSE	0.163	173.000	0.250	1.000	N	NA
3061589	3061590	VC274080_A0275	VC274080_A0276			FALSE	0.513	172.000	1.000	NA		NA
3061590	3061591	VC274080_A0276	VC274080_A0277			FALSE	0.564	89.000	0.300	NA		NA
3061591	3061592	VC274080_A0277	VC274080_A0278			TRUE	0.985	-3.000	1.000	NA		NA
3061592	3061593	VC274080_A0278	VC274080_A0279			TRUE	0.992	-3.000	0.800	1.000	Y	NA
3061593	3061594	VC274080_A0279	VC274080_A0280			TRUE	0.847	24.000	0.333	NA		NA
3061594	3061595	VC274080_A0280	VC274080_A0281			TRUE	0.945	-43.000	0.429	NA		NA
3061595	3061596	VC274080_A0281	VC274080_A0282			TRUE	0.681	43.000	0.286	NA		NA
3061596	3061597	VC274080_A0282	VC274080_A0283			TRUE	0.874	24.000	0.429	NA		NA
3061597	3061598	VC274080_A0283	VC274080_A0284			TRUE	0.587	110.000	0.333	NA		NA
3061598	3061599	VC274080_A0284	VC274080_A0285			TRUE	0.588	106.000	0.333	NA		NA
3061599	3061600	VC274080_A0285	VC274080_A0286			TRUE	0.889	11.000	0.176	1.000		NA
3061603	3061604	VC274080_A0289	VC274080_A0290	emrD-3		FALSE	0.005	248.000	0.000	1.000	N	NA
3061604	3061605	VC274080_A0290	VC274080_A0291			FALSE	0.008	220.000	0.000	1.000	N	NA
3061605	3061606	VC274080_A0291	VC274080_A0292			TRUE	0.927	16.000	0.625	1.000	N	NA
3061606	3061607	VC274080_A0292	VC274080_A0293		dacA-2	FALSE	0.381	165.000	0.600	1.000	N	NA
3061607	3061608	VC274080_A0293	VC274080_A0294	dacA-2		TRUE	0.981	-3.000	0.750	NA		NA
3061608	3061609	VC274080_A0294	VC274080_A0295			FALSE	0.553	65.000	0.250	NA		NA
3061614	3061615	VC274080_A0300	VC274080_A0301	gcvH	glyA-2	TRUE	0.660	37.000	0.054	1.000	Y	NA
3061616	3061617	VC274080_A0302	VC274080_A0303		gcvT	FALSE	0.006	244.000	0.006	1.000		NA
3061619	3061620	VC274080_A1123	VC274080_A1122		putA	FALSE	0.002	340.000	0.000	1.000	N	NA
3061620	3061621	VC274080_A1122	VC274080_A1121	putA		FALSE	0.344	22.000	0.050	1.000		NA
3061621	3061622	VC274080_A1121	VC274080_A1120		putP	FALSE	0.359	73.000	0.149	1.000		NA
3061622	3061623	VC274080_A1120	VC274080_A1119	putP		FALSE	0.017	184.000	0.031	1.000		NA
3061623	3061624	VC274080_A1119	VC274080_A1118			FALSE	0.006	330.000	0.000	1.000		NA
3061624	3061625	VC274080_A1118	VC274080_A1117			FALSE	0.014	198.000	0.092	1.000	N	NA
3061625	3061626	VC274080_A1117	VC274080_A1116			FALSE	0.024	173.000	0.092	1.000	N	NA
3061626	3061627	VC274080_A1116	VC274080_A1115			FALSE	0.558	80.000	0.286	NA		NA
3061627	3061628	VC274080_A1115	VC274080_A1114			FALSE	0.010	292.000	0.000	NA		NA
3061630	3061631	VC274080_A1112	VC274080_A1111	speF	potE	TRUE	0.816	68.000	0.391	1.000	Y	NA
3061634	3061635	VC274080_A1108	VC274080_A1107			FALSE	0.467	94.000	0.214	NA		NA
3061636	3061637	VC274080_A1106	VC274080_A1105			FALSE	0.004	390.000	0.000	1.000		NA
3061639	3061640	VC274080_A1103	VC274080_A1102			FALSE	0.402	22.000	0.057	NA		NA
3061640	3061641	VC274080_A1102	VC274080_A1101			FALSE	0.026	182.000	0.045	NA		NA
3061641	3061642	VC274080_A1101	VC274080_A1099			FALSE	0.091	76.000	0.021	NA		NA
3061645	3061646	VC274080_A1097	VC274080_A1096		mtlR	FALSE	0.100	114.000	0.041	NA		NA
3061646	3061647	VC274080_A1096	VC274080_A1095	mtlR	mtlD	FALSE	0.508	49.000	0.230	NA	N	NA
3061647	3061648	VC274080_A1095	VC274080_A1094	mtlD	mtlA	TRUE	0.887	101.000	0.292	0.053	Y	NA
3061648	3061649	VC274080_A1094	VC274080_A1093	mtlA		FALSE	0.059	139.000	0.025	NA		NA
3061650	3061651	VC274080_A1092	VC274080_A1091	tagE-2		TRUE	0.751	-90.000	0.111	NA		NA
3061652	3061653	VC274080_A1090	VC274080_A1089			FALSE	0.012	113.000	0.018	1.000	N	NA
3061653	3061654	VC274080_A1089	VC274080_A1088			TRUE	0.997	1.000	0.771	0.049	Y	NA
3061654	3061655	VC274080_A1088	VC274080_A1087			TRUE	0.938	36.000	0.771	0.049	N	NA
3061655	3061656	VC274080_A1087	VC274080_A1086			TRUE	0.969	0.000	0.548	1.000	N	NA
3061659	3061660	VC274080_A1083	VC274080_A1082			TRUE	0.848	9.000	0.158	1.000	N	NA
3061660	3061661	VC274080_A1082	VC274080_A1081			FALSE	0.012	268.000	0.000	NA		NA
3061663	3061664	VC274080_1560	VC274080_1561			TRUE	0.828	31.000	0.420	NA		NA
3061668	3061669	VC274080_1565	VC274080_1566		aroH	TRUE	0.966	-16.000	0.032	0.001		NA
3061669	3061670	VC274080_1566	VC274080_1567	aroH		FALSE	0.534	12.000	0.038	NA		NA
3061671	3061672	VC274080_1568	VC274080_1569	cobB		FALSE	0.122	98.000	0.052	NA		NA
3061672	3061673	VC274080_1569	VC274080_1570		fdnI	TRUE	0.880	-13.000	0.157	NA		NA
3061673	3061674	VC274080_1570	VC274080_1571	fdnI	fdhB	TRUE	0.995	1.000	0.217	0.002	Y	NA
3061674	3061675	VC274080_1571	VC274080_1572	fdhB		TRUE	0.996	12.000	0.750	0.002	Y	NA
3061675	3061676	VC274080_1572	VC274080_1573			TRUE	0.968	12.000	0.708	NA		NA
3061676	3061677	VC274080_1573	VC274080_1574			FALSE	0.460	78.000	0.200	NA		NA
3061677	3061678	VC274080_1574	VC274080_1575			TRUE	0.941	26.000	0.347	0.039		NA
3061678	3061679	VC274080_1575	VC274080_1576			FALSE	0.102	199.000	0.195	NA		NA
3061679	3061680	VC274080_1576	VC274080_1577			TRUE	0.969	-73.000	0.901	NA		NA
3061682	3061683	VC274080_1579	VC274080_1580			FALSE	0.120	212.000	0.000	0.100		NA
3061683	3061684	VC274080_1580	VC274080_1581			TRUE	0.990	-10.000	0.312	0.100	Y	NA
3061685	3061686	VC274080_1582	VC274080_1583			TRUE	0.988	7.000	0.524	NA	Y	NA
3061686	3061687	VC274080_1583	VC274080_1584			TRUE	0.743	9.000	0.115	1.000	N	NA
3061687	3061688	VC274080_1584	VC274080_1585		mobA	FALSE	0.107	-46.000	0.035	1.000	N	NA
3061688	3061689	VC274080_1585	VC274080_1586	mobA	moeA-1	TRUE	0.989	-3.000	0.073	0.003	Y	NA
3061690	3061691	VC274080_1587	VC274080_1588			TRUE	0.966	-27.000	0.667	NA		NA
3061691	3061692	VC274080_1588	VC274080_1589			TRUE	0.970	11.000	0.667	NA		NA
3061694	3061695	VC274080_1591	VC274080_1592			FALSE	0.178	164.000	0.167	NA		NA
3061700	3061701	VC274080_1597	VC274080_1598			FALSE	0.009	232.000	0.033	NA		NA
3061701	3061702	VC274080_1598	VC274080_1599			FALSE	0.017	243.000	0.000	NA		NA
3061702	3061703	VC274080_1599	VC274080_1600			FALSE	0.019	204.000	0.054	NA		NA
3061704	3061705	VC274080_1601	VC274080_1602	ligA-2		FALSE	0.008	303.000	0.000	1.000		NA
3061705	3061706	VC274080_1602	VC274080_1603		tonB2	FALSE	0.479	24.000	0.000	1.000		NA
3061706	3061707	VC274080_1603	VC274080_1604	tonB2	exbD2	TRUE	0.947	0.000	0.312	1.000	N	NA
3061707	3061708	VC274080_1604	VC274080_1605	exbD2	exbB2	TRUE	0.996	-3.000	0.600	0.060	Y	NA
3061708	3061709	VC274080_1605	VC274080_1606	exbB2		TRUE	0.996	7.000	0.462	0.012	Y	NA
3061709	3061710	VC274080_1606	VC274080_1607			TRUE	0.985	0.000	0.846	NA		NA
3061711	3061712	VC274080_0011	VC274080_0012		dnaN	TRUE	0.638	58.000	0.328	1.000		NA
3061712	3061713	VC274080_0012	VC274080_0013	dnaN	recF	TRUE	0.951	18.000	0.318	1.000	Y	NA
3061713	3061714	VC274080_0013	VC274080_0014	recF	gyrB	TRUE	0.979	21.000	0.249	0.005	Y	NA
3061714	3061715	VC274080_0014	VC274080_0015	gyrB		FALSE	0.005	356.000	0.000	1.000		NA
3061715	3061716	VC274080_0015	VC274080_0016			TRUE	0.963	10.000	0.455	NA		NA
3061716	3061717	VC274080_0016	VC274080_0017		ibpA	FALSE	0.011	276.000	0.000	NA		NA
3061718	3061719	VC274080_0018	VC274080_0019	avtA	glyS	FALSE	0.000	319.000	0.005	1.000	N	NA
3061719	3061720	VC274080_0019	VC274080_0020	glyS	glyQ	TRUE	0.995	15.000	0.651	0.001	Y	NA
3061721	3061722	VC274080_0021	VC274080_0022			FALSE	0.136	106.000	0.059	NA		NA
3061725	3061726	VC274080_0025	VC274080_0026		ilvA	FALSE	0.005	248.000	0.000	1.000	N	NA
3061726	3061727	VC274080_0026	VC274080_0027	ilvA	ilvD	TRUE	0.958	4.000	0.106	1.000	Y	NA
3061727	3061728	VC274080_0027	VC274080_0028	ilvD	ilvE	TRUE	0.934	10.000	0.075	1.000	Y	NA
3061728	3061729	VC274080_0028	VC274080_0029	ilvE	ilvM	TRUE	0.917	-9.000	0.205	1.000		NA
3061729	3061730	VC274080_0029	VC274080_0030	ilvM	ilvG	TRUE	0.994	12.000	0.943	0.002		NA
3061731	3061732	VC274080_0031	VC274080_0032			FALSE	0.013	90.000	0.014	1.000	N	NA
3061733	3061734	VC274080_0033	VC274080_0034	tpcG		FALSE	0.379	31.000	0.082	NA		NA
3061734	3061735	VC274080_0034	VC274080_0035			TRUE	0.820	12.000	0.125	NA		NA
3061735	3061736	VC274080_0035	VC274080_0036			FALSE	0.002	354.000	0.036	NA		NA
3061736	3061737	VC274080_0036	VC274080_0037			FALSE	0.437	97.000	0.196	NA		NA
3061738	3061739	VC274080_0038	VC274080_0039			FALSE	0.245	78.000	0.102	NA		NA
3061740	3061741	VC274080_0040	VC274080_0041		trkH-1	TRUE	0.892	-87.000	0.234	NA		NA
3061741	3061742	VC274080_0041	VC274080_0042	trkH-1	trkA	TRUE	0.986	12.000	0.126	0.003	Y	NA
3061742	3061743	VC274080_0042	VC274080_0043	trkA	sun	FALSE	0.206	62.000	0.122	1.000	N	NA
3061743	3061744	VC274080_0043	VC274080_0044	sun	fmt	TRUE	0.893	32.000	0.305	1.000	Y	NA
3061744	3061745	VC274080_0044	VC274080_0045	fmt	def-1	TRUE	0.956	18.000	0.058	0.016	Y	NA
3061746	3061747	VC274080_0046	VC274080_0047			TRUE	0.662	0.000	0.043	1.000		NA
3061747	3061748	VC274080_0047	VC274080_0048		smg	TRUE	0.890	3.000	0.124	NA		NA
3061748	3061749	VC274080_0048	VC274080_0049	smg		TRUE	0.958	8.000	0.331	NA		NA
3061750	3061751	VC274080_0050	VC274080_0051	purK	purE	TRUE	0.994	4.000	0.136	0.001	Y	NA
3061752	3061753	VC274080_0052	VC274080_0053		hemF	FALSE	0.170	19.000	0.066	NA	N	NA
3061753	3061754	VC274080_0053	VC274080_0054	hemF		FALSE	0.105	62.000	0.093	1.000	N	NA
3061754	3061755	VC274080_0054	VC274080_0056			TRUE	0.785	-3.000	0.078	NA		NA
3061757	3061758	VC274080_1938	VC274080_1937			TRUE	0.968	0.000	0.372	NA		NA
3061758	3061759	VC274080_1937	VC274080_1936			TRUE	0.757	53.000	0.516	NA		NA
3061759	3061760	VC274080_1936	VC274080_1935			TRUE	0.800	28.000	0.310	NA		NA
3061760	3061761	VC274080_1935	VC274080_1934			FALSE	0.110	180.000	0.151	NA		NA
3061764	3061765	VC274080_1931	VC274080_1930			FALSE	0.010	285.000	0.000	1.000		NA
3061765	3061766	VC274080_1930	VC274080_1929			FALSE	0.006	335.000	0.000	NA		NA
3061766	3061767	VC274080_1929	VC274080_1928		mfd	FALSE	0.110	140.000	0.071	NA		NA
3061767	3061768	VC274080_1928	VC274080_1927	mfd		TRUE	0.677	3.000	0.039	NA		NA
3061769	3061770	VC274080_1926	VC274080_1925			TRUE	0.962	-7.000	0.175	0.060	N	NA
3061770	3061771	VC274080_1925	VC274080_1924			TRUE	0.962	1.000	0.125	0.060	N	NA
3061773	3061774	VC274080_1922	VC274080_1921		msbA	TRUE	0.766	31.000	0.075	0.064		NA
3061774	3061775	VC274080_1921	VC274080_1920	msbA	lpxK	TRUE	0.913	0.000	0.205	1.000	N	NA
3061775	3061776	VC274080_1920	VC274080_1919	lpxK		TRUE	0.926	-19.000	0.263	NA		NA
3061776	3061777	VC274080_1919	VC274080_1918		kdsB	TRUE	0.954	0.000	0.265	NA		NA
3061778	3061779	VC274080_1917	VC274080_1916			TRUE	0.966	13.000	0.761	NA		NA
3061779	3061780	VC274080_1916	VC274080_1915			TRUE	0.620	145.000	0.683	NA		NA
3061780	3061781	VC274080_1915	VC274080_1914			FALSE	0.017	241.000	0.000	NA		NA
3061781	3061782	VC274080_1914	VC274080_1913			FALSE	0.284	109.000	0.120	NA		NA
3061782	3061783	VC274080_1913	VC274080_1912		pflA	FALSE	0.120	66.000	0.043	NA		NA
3061785	3061786	VC274080_1910	VC274080_1909		pflB	FALSE	0.362	136.000	0.200	NA		NA
3061786	3061787	VC274080_1909	VC274080_1908	pflB		FALSE	0.047	179.000	0.080	NA		NA
3061788	3061789	VC274080_1907	VC274080_1906			FALSE	0.526	179.000	0.533	1.000	Y	NA
3061789	3061790	VC274080_1906	VC274080_1905			TRUE	0.926	106.000	0.571	0.060	Y	NA
3061790	3061791	VC274080_1905	VC274080_1904			TRUE	0.998	3.000	0.903	0.016	Y	NA
3061794	3061795	VC274080_1036	VC274080_1037	zipA	ligA-1	FALSE	0.191	133.000	0.106	1.000		NA
3061795	3061796	VC274080_1037	VC274080_1038	ligA-1		FALSE	0.001	632.000	0.000	1.000	N	NA
3061796	3061797	VC274080_1038	VC274080_1039			TRUE	0.601	77.000	0.333	NA		NA
3061797	3061798	VC274080_1039	VC274080_1040			FALSE	0.272	61.000	0.100	NA		NA
3061799	3061800	VC274080_1041	VC274080_1042			TRUE	0.982	8.000	0.313	NA	Y	NA
3061800	3061801	VC274080_1042	VC274080_1043			FALSE	0.015	431.000	0.075	NA	Y	NA
3061801	3061802	VC274080_1043	VC274080_1044			FALSE	0.026	172.000	0.022	NA		NA
3061802	3061803	VC274080_1044	VC274080_1045			FALSE	0.092	75.000	0.024	NA		NA
3061803	3061804	VC274080_1045	VC274080_1046		rcp	FALSE	0.276	43.000	0.083	1.000		NA
3061806	3061807	VC274080_1048	VC274080_1049		toxS	FALSE	0.158	41.000	0.027	NA		NA
3061807	3061808	VC274080_1049	VC274080_1050	toxS	toxR	TRUE	0.946	10.000	0.294	NA		NA
3061809	3061810	VC274080_1051	VC274080_1052	htpG	adk	FALSE	0.015	335.000	0.035	0.098	N	NA
3061810	3061811	VC274080_1052	VC274080_1053	adk	hemH	FALSE	0.145	115.000	0.113	1.000	N	NA
3061813	3061814	VC274080_1055	VC274080_1056			FALSE	0.037	162.000	0.036	NA		NA
3061815	3061816	VC274080_1057	VC274080_1058	asnB		FALSE	0.002	196.000	0.027	1.000	N	NA
3061816	3061817	VC274080_1058	VC274080_1059		nagC	FALSE	0.344	95.000	0.200	1.000	N	NA
3061817	3061818	VC274080_1059	VC274080_1060	nagC	nagA-1	TRUE	0.990	3.000	0.571	1.000	Y	NA
3061819	3061820	VC274080_1061	VC274080_1062	nagE	glnS	FALSE	0.001	248.000	0.006	1.000	N	NA
3061820	3061821	VC274080_1062	VC274080_1064	glnS		FALSE	0.273	165.000	0.008	0.045		NA
3061823	3061824	VC274080_1065	VC274080_1066	truA	accD	FALSE	0.003	174.000	0.044	1.000	N	NA
3061824	3061825	VC274080_1066	VC274080_1067	accD	folC	TRUE	0.673	45.000	0.383	1.000	N	NA
3061825	3061826	VC274080_1067	VC274080_1068	folC	dedD	TRUE	0.945	1.000	0.216	NA		NA
3061826	3061827	VC274080_1068	VC274080_1069	dedD		FALSE	0.317	63.000	0.116	NA		NA
3061827	3061828	VC274080_1069	VC274080_1070		purF	TRUE	0.732	33.000	0.262	1.000		NA
3061829	3061830	VC274080_1071	VC274080_1072		rnt	FALSE	0.178	101.000	0.084	1.000		NA
3061831	3061832	VC274080_1113	VC274080_1112	dnaX	apt	FALSE	0.306	19.000	0.088	1.000	N	NA
3061832	3061833	VC274080_1112	VC274080_1111	apt		FALSE	0.082	132.000	0.043	NA		NA
3061833	3061834	VC274080_1111	VC274080_1110			TRUE	0.829	0.000	0.000	NA		NA
3061834	3061835	VC274080_1110	VC274080_1109			FALSE	0.070	170.000	0.000	NA		NA
3061837	3061838	VC274080_1107	VC274080_1106		yfcX	FALSE	0.010	127.000	0.011	1.000	N	NA
3061838	3061839	VC274080_1106	VC274080_1105	yfcX	hadHB	TRUE	0.988	0.000	0.430	1.000	Y	NA
3061840	3061841	VC274080_1104	VC274080_1103			TRUE	0.982	-7.000	0.946	NA		NA
3061841	3061842	VC274080_1103	VC274080_1102		fadL-2	FALSE	0.014	260.000	0.000	NA		NA
3061842	3061843	VC274080_1102	VC274080_1101	fadL-2	fadL-1	FALSE	0.142	303.000	0.000	0.006	Y	NA
3061846	3061847	VC274080_1098	VC274080_1097	asmA	udk	FALSE	0.012	98.000	0.037	NA	N	NA
3061847	3061848	VC274080_1097	VC274080_1096	udk	mrp	FALSE	0.236	159.000	0.073	0.098	N	NA
3061849	3061850	VC274080_1095	VC274080_1094	metG		FALSE	0.023	226.000	0.000	NA		NA
3061851	3061852	VC274080_1093	VC274080_1092	udp-1		FALSE	0.001	446.000	0.000	1.000	N	NA
3061852	3061853	VC274080_1092	VC274080_1091			FALSE	0.574	113.000	0.125	0.052	N	NA
3061855	3061856	VC274080_1089	VC274080_1088	moaE	moaD	TRUE	0.997	2.000	0.501	0.003	Y	NA
3061856	3061857	VC274080_1088	VC274080_1087	moaD	moaC	TRUE	0.993	-3.000	0.175	0.003	Y	NA
3061857	3061858	VC274080_1087	VC274080_1086	moaC	moaB	TRUE	0.990	8.000	0.109	0.003	Y	NA
3061858	3061859	VC274080_1086	VC274080_1085	moaB	moaA	TRUE	0.884	60.000	0.108	0.003	Y	NA
3061861	3061862	VC274080_1084	VC274080_1082	luxU	luxO	TRUE	0.980	4.000	0.654	NA		NA
3061862	3061863	VC274080_1082	VC274080_1081	luxO	uvrB	FALSE	0.015	389.000	0.000	0.098	N	NA
3061863	3061864	VC274080_1081	VC274080_1080	uvrB		FALSE	0.004	415.000	0.000	NA		NA
3061865	3061866	VC274080_1079	VC274080_1078			FALSE	0.089	160.000	0.000	NA		NA
3061866	3061867	VC274080_1078	VC274080_1077			TRUE	0.996	0.000	0.564	0.039	Y	NA
3061867	3061868	VC274080_1077	VC274080_1076			TRUE	0.996	9.000	0.537	0.014	Y	NA
3061868	3061869	VC274080_1076	VC274080_1075			TRUE	0.997	0.000	0.814	0.039	Y	NA
3061869	3061870	VC274080_1075	VC274080_1074			TRUE	0.996	12.000	0.924	0.039	Y	NA
3061870	3061871	VC274080_1074	VC274080_1073			TRUE	0.998	2.000	0.908	0.039	Y	NA
3061872	3061873	VC274080_1179	VC274080_1180			TRUE	0.982	0.000	0.722	NA		NA
3061873	3061874	VC274080_1180	VC274080_1181		cfa	TRUE	0.921	-67.000	0.311	NA		NA
3061874	3061875	VC274080_1181	VC274080_1182	cfa		TRUE	0.978	3.000	0.588	NA		NA
3061875	3061876	VC274080_1182	VC274080_1183			TRUE	0.937	-67.000	0.387	NA		NA
3061876	3061877	VC274080_1183	VC274080_1184			TRUE	0.967	-3.000	0.395	NA		NA
3061878	3061879	VC274080_1185	VC274080_1186	purB		FALSE	0.261	58.000	0.093	NA		NA
3061879	3061880	VC274080_1186	VC274080_1187		trmU	TRUE	0.742	23.000	0.180	NA		NA
3061883	3061884	VC274080_1190	VC274080_1191			FALSE	0.038	197.000	0.000	NA		NA
3061884	3061885	VC274080_1191	VC274080_1192		hisG	FALSE	0.114	150.000	0.000	NA		NA
3061885	3061886	VC274080_1192	VC274080_1193	hisG	hisD	TRUE	0.993	5.000	0.171	0.003	Y	NA
3061886	3061887	VC274080_1193	VC274080_1194	hisD	hisC	TRUE	0.996	4.000	0.294	0.003	Y	NA
3061887	3061888	VC274080_1194	VC274080_1195	hisC	hisB	TRUE	0.954	52.000	0.341	0.003	Y	NA
3061888	3061889	VC274080_1195	VC274080_1196	hisB	hisH	TRUE	0.992	0.000	0.128	0.003	Y	NA
3061889	3061890	VC274080_1196	VC274080_1197	hisH	hisA	TRUE	0.945	43.000	0.210	0.003	Y	NA
3061890	3061891	VC274080_1197	VC274080_1198	hisA	hisF	TRUE	0.995	-18.000	0.433	0.003	Y	NA
3061891	3061892	VC274080_1198	VC274080_1199	hisF	hisI	TRUE	0.996	-3.000	0.430	0.003	Y	NA
3061896	3061897	VC274080_1203	VC274080_1204		clpA	TRUE	0.829	39.000	0.596	NA		NA
3061898	3061899	VC274080_1205	VC274080_1206		grxA	FALSE	0.031	202.000	0.000	1.000		NA
3061901	3061902	VC274080_1208	VC274080_1209			FALSE	0.003	308.000	0.000	1.000	N	NA
3061902	3061903	VC274080_1209	VC274080_1210			FALSE	0.466	110.000	0.212	NA		NA
3061903	3061904	VC274080_1210	VC274080_1211			FALSE	0.162	93.000	0.071	NA		NA
3061904	3061905	VC274080_1211	VC274080_1212			TRUE	0.634	21.000	0.113	NA		NA
3061907	3061908	VC274080_1214	VC274080_1215			FALSE	0.232	191.000	0.412	NA		NA
3061908	3061909	VC274080_1215	VC274080_1216			TRUE	0.992	-3.000	0.857	1.000	Y	NA
3061910	3061911	VC274080_1217	VC274080_1218			FALSE	0.080	122.000	0.012	NA		NA
3061914	3061915	VC274080_A0661	VC274080_A0660		fhs	FALSE	0.078	128.000	0.095	1.000	N	NA
3061915	3061916	VC274080_A0660	VC274080_A0659	fhs		TRUE	0.870	34.000	0.667	NA		NA
3061916	3061917	VC274080_A0659	VC274080_A0658		mscL	FALSE	0.220	33.000	0.007	NA		NA
3061917	3061918	VC274080_A0658	VC274080_A0657	mscL		TRUE	0.653	-3.000	0.007	NA		NA
3061918	3061919	VC274080_A0657	VC274080_A0656		elbB	FALSE	0.063	137.000	0.028	NA		NA
3061919	3061920	VC274080_A0656	VC274080_A0655	elbB		TRUE	0.637	5.000	0.028	NA		NA
3061922	3061923	VC274080_A0653	VC274080_A0652		phnX	FALSE	0.028	165.000	0.030	1.000		NA
3061923	3061924	VC274080_A0652	VC274080_A0651	phnX		FALSE	0.578	7.000	0.018	1.000		NA
3061924	3061925	VC274080_A0651	VC274080_A0650		phnW	TRUE	0.953	18.000	0.037	0.015	Y	NA
3061926	3061927	VC274080_A0649	VC274080_A0648			FALSE	0.268	214.000	0.333	0.047	N	NA
3061927	3061928	VC274080_A0648	VC274080_A0647			TRUE	0.983	-67.000	0.762	0.047	N	NA
3061928	3061929	VC274080_A0647	VC274080_A0646			TRUE	0.872	25.000	0.609	1.000	N	NA
3061929	3061930	VC274080_A0646	VC274080_A0645			TRUE	0.693	66.000	0.478	NA		NA
3061934	3061935	VC274080_A0641	VC274080_A0640			FALSE	0.332	54.000	0.109	NA		NA
3061935	3061936	VC274080_A0640	VC274080_A0639			FALSE	0.032	196.000	0.121	1.000	N	NA
3061936	3061937	VC274080_A0639	VC274080_A0638			TRUE	0.993	9.000	0.848	0.047		NA
3061937	3061938	VC274080_A0638	VC274080_A0637			TRUE	0.993	-3.000	0.833	0.047		NA
3061938	3061939	VC274080_A0637	VC274080_A0636			TRUE	0.981	-3.000	0.758	1.000		NA
3061940	3061941	VC274080_A0635	VC274080_A0634			TRUE	0.902	-3.000	0.147	NA		NA
3061942	3061943	VC274080_A0633	VC274080_A0632			TRUE	0.993	12.000	0.314	0.002	Y	NA
3061949	3061950	VC274080_A0626	VC274080_A0625			TRUE	0.649	81.000	0.414	NA		NA
3061956	3061957	VC274080_2684	VC274080_2683			TRUE	0.964	0.000	0.333	NA		NA
3061957	3061958	VC274080_2683	VC274080_2682			TRUE	0.931	0.000	0.182	NA		NA
3061958	3061959	VC274080_2682	VC274080_2681			TRUE	0.952	-15.000	0.375	NA		NA
3061959	3061960	VC274080_2681	VC274080_2680			TRUE	0.956	-10.000	0.375	NA		NA
3061960	3061961	VC274080_2680	VC274080_2679			TRUE	0.982	3.000	0.692	NA		NA
3061961	3061962	VC274080_2679	VC274080_2678			TRUE	0.953	-3.000	0.281	NA		NA
3061962	3061963	VC274080_2678	VC274080_2677			TRUE	0.796	-7.000	0.094	NA		NA
3061963	3061964	VC274080_2677	VC274080_2676			TRUE	0.727	12.000	0.000	NA		NA
3061964	3061965	VC274080_2676	VC274080_2675			TRUE	0.692	126.000	0.667	NA		NA
3061965	3061966	VC274080_2675	VC274080_2674			TRUE	0.872	0.000	0.111	NA		NA
3061966	3061967	VC274080_2674	VC274080_2673			TRUE	0.955	15.000	0.720	NA		NA
3061967	3061968	VC274080_2673	VC274080_2672			TRUE	0.950	3.000	0.240	NA		NA
3061968	3061969	VC274080_2672	VC274080_2671			TRUE	0.672	14.000	0.000	NA		NA
3061969	3061970	VC274080_2671	VC274080_2670			TRUE	0.814	-3.000	0.000	NA		NA
3061970	3061971	VC274080_2670	VC274080_2669			TRUE	0.963	0.000	0.317	NA		NA
3061971	3061972	VC274080_2669	VC274080_2668			TRUE	0.832	6.000	0.098	NA		NA
3061972	3061973	VC274080_2668	VC274080_2667			TRUE	0.637	89.000	0.400	NA		NA
3061973	3061974	VC274080_2667	VC274080_2666			TRUE	0.935	3.000	0.190	NA		NA
3061974	3061975	VC274080_2666	VC274080_2665			FALSE	0.005	375.000	0.000	NA		NA
3061975	3061976	VC274080_2665	VC274080_2664			TRUE	0.975	0.000	0.500	NA		NA
3061976	3061977	VC274080_2664	VC274080_2663			TRUE	0.972	-3.000	0.500	NA		NA
3061977	3061978	VC274080_2663	VC274080_2662			TRUE	0.981	-3.000	0.750	NA		NA
3061978	3061979	VC274080_2662	VC274080_2661			TRUE	0.868	12.000	0.167	NA		NA
3061979	3061980	VC274080_2661	VC274080_2660			TRUE	0.960	-7.000	0.381	NA		NA
3061980	3061981	VC274080_2660	VC274080_2659			TRUE	0.945	-3.000	0.238	NA		NA
3061981	3061982	VC274080_2659	VC274080_2658			TRUE	0.971	1.000	0.400	NA		NA
3061982	3061983	VC274080_2658	VC274080_2657			TRUE	0.962	12.000	0.600	NA		NA
3061983	3061984	VC274080_2657	VC274080_2656			TRUE	0.847	9.000	0.111	NA		NA
3061984	3061985	VC274080_2656	VC274080_2655			TRUE	0.946	0.000	0.222	NA		NA
3061985	3061986	VC274080_2655	VC274080_2654			TRUE	0.964	-3.000	0.364	NA		NA
3061986	3061987	VC274080_2654	VC274080_2653			TRUE	0.957	-24.000	0.500	NA		NA
3061987	3061988	VC274080_2653	VC274080_2652			TRUE	0.969	0.000	0.375	NA		NA
3061988	3061989	VC274080_2652	VC274080_2651			TRUE	0.681	85.000	0.500	NA		NA
3061989	3061990	VC274080_2651	VC274080_2650			FALSE	0.003	515.000	0.000	NA		NA
3061990	3061991	VC274080_2650	VC274080_2649			TRUE	0.697	13.000	0.000	NA		NA
3061991	3061992	VC274080_2649	VC274080_2648			TRUE	0.828	3.000	0.000	NA		NA
3061992	3061993	VC274080_2648	VC274080_2647			FALSE	0.212	80.000	0.000	NA		NA
3061993	3061994	VC274080_2647	VC274080_2646			TRUE	0.814	-3.000	0.000	NA		NA
3061994	3061995	VC274080_2646	VC274080_2645			FALSE	0.211	84.000	0.000	NA		NA
3061995	3061996	VC274080_2645	VC274080_2644			FALSE	0.105	153.000	0.000	NA		NA
3061996	3061997	VC274080_2644	VC274080_2643			TRUE	0.973	-16.000	0.750	NA		NA
3061997	3061998	VC274080_2643	VC274080_2642			TRUE	0.978	-7.000	0.750	NA		NA
3061998	3061999	VC274080_2642	VC274080_2641			TRUE	0.781	10.000	0.000	NA		NA
3061999	3062000	VC274080_2641	VC274080_2640			TRUE	0.761	-13.000	0.000	NA		NA
3062000	3062001	VC274080_2640	VC274080_2639			TRUE	0.964	-34.000	0.667	NA		NA
3062001	3062002	VC274080_2639	VC274080_2638			TRUE	0.781	10.000	0.000	NA		NA
3062002	3062003	VC274080_2638	VC274080_2637			TRUE	0.781	10.000	0.000	NA		NA
3062003	3062004	VC274080_2637	VC274080_2636			TRUE	0.980	8.000	0.750	NA		NA
3062004	3062005	VC274080_2636	VC274080_2635			TRUE	0.962	27.000	0.500	0.005		NA
3062005	3062006	VC274080_2635	VC274080_2634			TRUE	0.941	12.000	0.000	0.042		NA
3062007	3062008	VC274080_2633	VC274080_2632			FALSE	0.009	290.000	0.000	1.000		NA
3062008	3062009	VC274080_2632	VC274080_2631			TRUE	0.968	-16.000	0.616	NA		NA
3062009	3062010	VC274080_2631	VC274080_2630			TRUE	0.988	-16.000	0.770	NA	Y	NA
3062010	3062011	VC274080_2630	VC274080_2629			TRUE	0.988	-10.000	0.680	NA	Y	NA
3062011	3062012	VC274080_2629	VC274080_2628		pilQ	TRUE	0.991	5.000	0.668	NA	Y	NA
3062014	3062015	VC274080_0335	VC274080_0334			FALSE	0.110	66.000	0.008	NA		NA
3062016	3062017	VC274080_0333	VC274080_0332			TRUE	0.881	28.000	0.609	1.000		NA
3062019	3062020	VC274080_0330	VC274080_0329			TRUE	0.991	-3.000	0.706	1.000	Y	NA
3062020	3062021	VC274080_0329	VC274080_0328			TRUE	0.987	-9.000	0.650	1.000	Y	NA
3062021	3062022	VC274080_0328	VC274080_0327			TRUE	0.826	59.000	0.360	1.000	Y	NA
3062024	3062025	VC274080_0325	VC274080_0324			FALSE	0.157	156.000	0.125	NA		NA
3062025	3062026	VC274080_0324	VC274080_0323		recQ	TRUE	0.675	-7.000	0.054	NA		NA
3062026	3062027	VC274080_0323	VC274080_0322	recQ		FALSE	0.096	82.000	0.011	NA		NA
3062028	3062029	VC274080_0321	VC274080_0320	rarD	ggt	FALSE	0.033	162.000	0.020	NA		NA
3062029	3062030	VC274080_0320	VC274080_0319	ggt		FALSE	0.010	148.000	0.065	1.000	N	NA
3062030	3062031	VC274080_0319	VC274080_0318			FALSE	0.323	75.000	0.182	1.000	N	NA
3062032	3062033	VC274080_0317	VC274080_0316	uvrD	prlC	FALSE	0.008	138.000	0.036	1.000	N	NA
3062034	3062035	VC274080_0315	VC274080_0314		gor	FALSE	0.219	106.000	0.100	1.000		NA
3062036	3062037	VC274080_0313	VC274080_0312			FALSE	0.197	175.000	0.239	NA		NA
3062037	3062038	VC274080_0312	VC274080_0311			TRUE	0.997	3.000	1.000	0.047	Y	NA
3062038	3062039	VC274080_0311	VC274080_0310			TRUE	0.949	104.000	0.848	0.047	Y	NA
3062039	3062040	VC274080_0310	VC274080_0309			TRUE	0.895	20.000	0.408	1.000		NA
3062040	3062041	VC274080_0309	VC274080_0308			FALSE	0.010	292.000	0.000	NA		NA
3062041	3062042	VC274080_0308	VC274080_0307			FALSE	0.020	235.000	0.000	NA		NA
3062042	3062043	VC274080_0307	VC274080_0306			FALSE	0.238	62.000	0.000	NA		NA
3062043	3062044	VC274080_0306	VC274080_0305			FALSE	0.215	71.000	0.000	NA		NA
3062044	3062045	VC274080_0305	VC274080_0304			FALSE	0.238	62.000	0.000	NA		NA
3062045	3062046	VC274080_0304	VC274080_0303			FALSE	0.365	36.000	0.000	NA		NA
3062049	3062050	VC274080_0541	VC274080_0540		maf	TRUE	0.856	26.000	0.417	NA		NA
3062050	3062051	VC274080_0540	VC274080_0539	maf	mreD	TRUE	0.840	-57.000	0.206	NA	N	NA
3062051	3062052	VC274080_0539	VC274080_0538	mreD	mreC	TRUE	0.996	-13.000	0.550	0.002	Y	NA
3062052	3062053	VC274080_0538	VC274080_0537	mreC	mreB	TRUE	0.744	57.000	0.689	1.000	N	NA
3062053	3062054	VC274080_0537	VC274080_0536	mreB		FALSE	0.032	168.000	0.009	NA		NA
3062054	3062055	VC274080_0536	VC274080_0535			TRUE	0.882	-7.000	0.143	NA		NA
3062055	3062056	VC274080_0535	VC274080_0534			TRUE	0.740	-34.000	0.097	NA		NA
3062056	3062057	VC274080_0534	VC274080_0533		mshD	TRUE	0.985	0.000	0.871	NA		NA
3062057	3062058	VC274080_0533	VC274080_0532	mshD	mshC	TRUE	0.970	5.000	0.433	NA		NA
3062058	3062059	VC274080_0532	VC274080_0531	mshC	mshA	FALSE	0.438	37.000	0.111	NA		NA
3062059	3062060	VC274080_0531	VC274080_0530	mshA	mshB	TRUE	0.762	26.000	0.231	NA		NA
3062060	3062061	VC274080_0530	VC274080_0529	mshB	mshF	FALSE	0.500	81.000	0.231	NA		NA
3062061	3062062	VC274080_0529	VC274080_0528	mshF	mshG	TRUE	0.676	3.000	0.039	NA		NA
3062062	3062063	VC274080_0528	VC274080_0527	mshG	mshE	TRUE	0.990	9.000	0.740	1.000	Y	NA
3062063	3062064	VC274080_0527	VC274080_0526	mshE	mshN	TRUE	0.947	-10.000	0.328	1.000		NA
3062064	3062065	VC274080_0526	VC274080_0525	mshN	mshM	TRUE	0.941	-21.000	0.338	1.000		NA
3062065	3062066	VC274080_0525	VC274080_0524	mshM	mshL	TRUE	0.992	5.000	0.846	1.000	Y	NA
3062066	3062067	VC274080_0524	VC274080_0523	mshL	mshK	TRUE	0.918	15.000	0.356	NA		NA
3062067	3062068	VC274080_0523	VC274080_0522	mshK	mshJ	TRUE	0.956	-7.000	0.344	NA		NA
3062068	3062069	VC274080_0522	VC274080_0521	mshJ	mshI	TRUE	0.794	-3.000	0.082	NA		NA
3062069	3062070	VC274080_0521	VC274080_0520	mshI	mshH	FALSE	0.103	13.000	0.051	NA	N	NA
3062070	3062071	VC274080_0520	VC274080_0519	mshH	ssb	FALSE	0.034	115.000	0.071	1.000	N	NA
3062072	3062073	VC274080_0518	VC274080_0517		galU	FALSE	0.445	170.000	0.857	1.000	N	NA
3062073	3062074	VC274080_0517	VC274080_0516	galU	uvrA	FALSE	0.005	156.000	0.013	1.000	N	NA
3062074	3062075	VC274080_0516	VC274080_0515	uvrA		FALSE	0.017	56.000	0.013	1.000	N	NA
3062082	3062083	VC274080_2434	VC274080_2433			FALSE	0.482	32.000	0.110	NA		NA
3062083	3062084	VC274080_2433	VC274080_2432		pilD	TRUE	0.789	-3.000	0.122	1.000	N	NA
3062084	3062085	VC274080_2432	VC274080_2431	pilD	pilC	TRUE	0.850	58.000	0.454	1.000	Y	NA
3062085	3062086	VC274080_2431	VC274080_2430	pilC	pilB	TRUE	0.956	43.000	0.362	0.012	Y	NA
3062086	3062087	VC274080_2430	VC274080_2429	pilB	pilA	TRUE	0.992	0.000	0.169	0.012	Y	NA
3062087	3062088	VC274080_2429	VC274080_2428	pilA	nadC	FALSE	0.006	245.000	0.000	1.000	N	NA
3062091	3062092	VC274080_2425	VC274080_2424	xerD	dsbC	FALSE	0.252	17.000	0.079	1.000	N	NA
3062092	3062093	VC274080_2424	VC274080_2423	dsbC	recJ	FALSE	0.099	44.000	0.082	1.000	N	NA
3062095	3062096	VC274080_2421	VC274080_2420	pdhR	aceE	FALSE	0.552	50.000	0.276	1.000	N	NA
3062096	3062097	VC274080_2420	VC274080_2419	aceE	aceF	TRUE	0.979	1.000	0.220	1.000	Y	NA
3062097	3062098	VC274080_2419	VC274080_2418	aceF	lpdA	FALSE	0.177	268.000	0.463	1.000	Y	NA
3062098	3062099	VC274080_2418	VC274080_2417	lpdA		FALSE	0.001	772.000	0.000	1.000	N	NA
3062099	3062100	VC274080_2417	VC274080_2416		ftsL	TRUE	0.899	10.000	0.227	1.000	N	NA
3062100	3062101	VC274080_2416	VC274080_2415	ftsL	ftsI	TRUE	0.877	-3.000	0.173	1.000	N	NA
3062101	3062102	VC274080_2415	VC274080_2414	ftsI	murE	TRUE	0.914	-34.000	0.083	1.000	Y	NA
3062102	3062103	VC274080_2414	VC274080_2413	murE	murF	TRUE	0.997	-3.000	0.569	0.002	Y	NA
3062103	3062104	VC274080_2413	VC274080_2412	murF	mraY	TRUE	0.995	-3.000	0.309	0.004	Y	NA
3062104	3062105	VC274080_2412	VC274080_2411	mraY	murD	TRUE	0.988	24.000	0.647	0.004	Y	NA
3062105	3062106	VC274080_2411	VC274080_2410	murD	ftsW	TRUE	0.967	17.000	0.297	0.003	N	NA
3062106	3062107	VC274080_2410	VC274080_2409	ftsW	murG	TRUE	0.959	-16.000	0.647	1.000	N	NA
3062107	3062108	VC274080_2409	VC274080_2408	murG	murC	TRUE	0.960	14.000	0.283	1.000	Y	NA
3062108	3062109	VC274080_2408	VC274080_2407	murC	ftsQ	FALSE	0.256	182.000	0.134	NA	Y	NA
3062109	3062110	VC274080_2407	VC274080_2406	ftsQ	ftsA	TRUE	0.948	-7.000	0.389	NA	N	NA
3062110	3062111	VC274080_2406	VC274080_2405	ftsA		TRUE	0.834	31.000	0.460	1.000		NA
3062113	3062114	VC274080_0060	VC274080_0061	rrfD		FALSE	0.496	24.000	0.000	NA		NA
3062114	3062115	VC274080_0061	VC274080_0062			FALSE	0.419	30.000	0.000	NA		NA
3062115	3062116	VC274080_0062	VC274080_0063		crcB	FALSE	0.021	232.000	0.000	NA		NA
3062116	3062117	VC274080_0063	VC274080_0064	crcB	thiC	FALSE	0.006	252.000	0.000	NA	N	NA
3062117	3062118	VC274080_0064	VC274080_0065	thiC	thiE	TRUE	0.989	4.000	0.063	0.003	Y	NA
3062118	3062119	VC274080_0065	VC274080_0066	thiE	thiF	TRUE	0.970	-13.000	0.242	1.000	Y	NA
3062119	3062120	VC274080_0066	VC274080_0067	thiF	thiS	TRUE	0.978	-57.000	0.548	1.000	Y	NA
3062120	3062121	VC274080_0067	VC274080_0068	thiS	thiG	TRUE	0.950	6.000	0.087	1.000	Y	NA
3062121	3062122	VC274080_0068	VC274080_0069	thiG	thiH	TRUE	0.995	-3.000	0.277	0.003	Y	NA
3062123	3062124	VC274080_0070	VC274080_0071			FALSE	0.030	133.000	0.074	1.000	N	NA
3062125	3062126	VC274080_0072	VC274080_0073			TRUE	0.689	122.000	0.625	NA		NA
3062128	3062129	VC274080_0075	VC274080_0076			TRUE	0.601	-33.000	0.055	NA		NA
3062129	3062130	VC274080_0076	VC274080_0077			FALSE	0.112	118.000	0.051	NA		NA
3062131	3062132	VC274080_0078	VC274080_0079	madN	uspA	FALSE	0.204	57.000	0.076	1.000		NA
3062133	3062134	VC274080_0080	VC274080_0081	ftn		FALSE	0.509	76.000	0.235	NA		NA
3062134	3062135	VC274080_0081	VC274080_0083			FALSE	0.069	133.000	0.028	NA		NA
3062137	3062138	VC274080_0084	VC274080_0085		ubiE	FALSE	0.177	45.000	0.047	NA		NA
3062138	3062139	VC274080_0085	VC274080_0086	ubiE		TRUE	0.887	9.000	0.145	1.000		NA
3062139	3062140	VC274080_0086	VC274080_0087			TRUE	0.968	-3.000	0.432	1.000		NA
3062140	3062141	VC274080_0087	VC274080_0088		tatA-1	FALSE	0.120	60.000	0.044	1.000		NA
3062141	3062142	VC274080_0088	VC274080_0089	tatA-1		TRUE	0.994	4.000	0.246	0.006	Y	NA
3062142	3062143	VC274080_0089	VC274080_0090			TRUE	0.779	89.000	0.333	1.000	Y	NA
3062143	3062144	VC274080_0090	VC274080_0091		yhjA	FALSE	0.003	312.000	0.000	1.000	N	NA
3062145	3062146	VC274080_0092	VC274080_0093	dinF		FALSE	0.014	71.000	0.039	NA	N	NA
3062146	3062147	VC274080_0093	VC274080_0094		lexA	FALSE	0.200	28.000	0.083	NA	N	NA
3062149	3062150	VC274080_0096	VC274080_0097	ubiA	ubiC	TRUE	0.952	1.000	0.248	NA		NA
3062151	3062152	VC274080_1016	VC274080_1015		lipB	FALSE	0.170	179.000	0.219	NA		NA
3062152	3062153	VC274080_1015	VC274080_1014	lipB	lipA	TRUE	0.996	-7.000	0.319	0.001	Y	NA
3062153	3062154	VC274080_1014	VC274080_1013	lipA		FALSE	0.032	169.000	0.008	NA		NA
3062157	3062158	VC274080_1010	VC274080_1009			TRUE	0.954	-21.000	0.455	NA		NA
3062158	3062159	VC274080_1009	VC274080_1008			TRUE	0.928	-3.000	0.194	1.000		NA
3062159	3062160	VC274080_1008	VC274080_1007			TRUE	0.950	25.000	0.581	1.000	Y	NA
3062160	3062161	VC274080_1007	VC274080_1006			TRUE	0.972	4.000	0.474	1.000		NA
3062161	3062162	VC274080_1006	VC274080_1005			TRUE	0.639	71.000	0.395	1.000		NA
3062163	3062164	VC274080_1004	VC274080_1003			FALSE	0.070	176.000	0.103	NA		NA
3062167	3062168	VC274080_1000	VC274080_0999		cpsF	FALSE	0.027	196.000	0.065	NA		NA
3062168	3062169	VC274080_0999	VC274080_0998	cpsF		TRUE	0.829	-10.000	0.113	NA		NA
3062169	3062170	VC274080_0998	VC274080_0997			FALSE	0.256	36.000	0.056	NA		NA
3062170	3062171	VC274080_0997	VC274080_0996			FALSE	0.579	-24.000	0.101	1.000	N	NA
3062171	3062172	VC274080_0996	VC274080_0995			TRUE	0.880	0.000	0.167	1.000	N	NA
3062172	3062173	VC274080_0995	VC274080_0994			TRUE	0.977	11.000	0.857	NA		NA
3062173	3062174	VC274080_0994	VC274080_0993			TRUE	0.975	-3.000	0.571	NA		NA
3062174	3062175	VC274080_0993	VC274080_0992			TRUE	0.976	-3.000	0.600	1.000		NA
3062175	3062176	VC274080_0992	VC274080_0991			TRUE	0.963	-3.000	0.500	1.000	N	NA
3062176	3062177	VC274080_0991	VC274080_0990		epsD	TRUE	0.947	-3.000	0.333	1.000	N	NA
3062177	3062178	VC274080_0990	VC274080_0989	epsD	wecB	TRUE	0.959	20.000	0.500	1.000	Y	NA
3062178	3062179	VC274080_0989	VC274080_0988	wecB		FALSE	0.003	313.000	0.000	1.000	N	NA
3062179	3062180	VC274080_0988	VC274080_0987			FALSE	0.001	427.000	0.000	NA	N	NA
3062180	3062181	VC274080_0987	VC274080_0986			TRUE	0.801	0.000	0.078	NA		NA
3062182	3062183	VC274080_0146	VC274080_0145	ftsX	ftsE	TRUE	0.951	-10.000	0.121	NA	Y	NA
3062183	3062184	VC274080_0145	VC274080_0144	ftsE	ftsY	TRUE	0.833	22.000	0.117	0.095	N	NA
3062185	3062186	VC274080_0143	VC274080_0142			TRUE	0.741	-3.000	0.063	NA		NA
3062187	3062188	VC274080_0141	VC274080_0140			FALSE	0.509	117.000	0.267	NA		NA
3062188	3062189	VC274080_0140	VC274080_0139			FALSE	0.003	503.000	0.000	NA		NA
3062190	3062191	VC274080_0138	VC274080_0137			FALSE	0.070	170.000	0.000	NA		NA
3062191	3062192	VC274080_0137	VC274080_0136			FALSE	0.276	53.000	0.091	NA		NA
3062193	3062194	VC274080_0135	VC274080_0134			FALSE	0.365	20.000	0.094	NA	N	NA
3062195	3062196	VC274080_0133	VC274080_0132	lypA		FALSE	0.222	115.000	0.103	1.000		NA
3062196	3062197	VC274080_0132	VC274080_0131			FALSE	0.011	284.000	0.000	NA		NA
3062197	3062198	VC274080_0131	VC274080_0130			TRUE	0.924	-3.000	0.182	NA		NA
3062199	3062200	VC274080_0129	VC274080_0128			FALSE	0.191	110.000	0.000	1.000		NA
3062200	3062201	VC274080_0128	VC274080_0127		xerC	TRUE	0.967	3.000	0.367	1.000		NA
3062201	3062202	VC274080_0127	VC274080_0126	xerC		TRUE	0.968	-31.000	0.714	NA		NA
3062202	3062203	VC274080_0126	VC274080_0125		dapF	TRUE	0.844	14.000	0.175	NA		NA
3062203	3062204	VC274080_0125	VC274080_0124	dapF	lysA	TRUE	0.985	12.000	0.104	0.002	Y	NA
3062204	3062205	VC274080_0124	VC274080_0123	lysA	lppL	FALSE	0.219	33.000	0.007	NA		NA
3062208	3062209	VC274080_0120	VC274080_0119		hemC	FALSE	0.026	177.000	0.004	NA		NA
3062209	3062210	VC274080_0119	VC274080_0118	hemC	hemD	TRUE	0.945	46.000	0.205	0.002	Y	NA
3062210	3062211	VC274080_0118	VC274080_0117	hemD		TRUE	0.985	-16.000	0.600	1.000	Y	NA
3062211	3062212	VC274080_0117	VC274080_0116		hemY	TRUE	0.992	-3.000	0.765	1.000	Y	NA
3062213	3062214	VC274080_0115	VC274080_0114	hemN		FALSE	0.517	85.000	0.244	NA		NA
3062214	3062215	VC274080_0114	VC274080_0113			TRUE	0.979	7.000	0.679	NA		NA
3062215	3062216	VC274080_0113	VC274080_0112			TRUE	0.964	0.000	0.333	NA		NA
3062216	3062217	VC274080_0112	VC274080_0111		cycA	FALSE	0.049	172.000	0.069	NA		NA
3062218	3062219	VC274080_0110	VC274080_0108			FALSE	0.002	681.000	0.000	NA		NA
3062221	3062222	VC274080_0794	VC274080_0793	clpB-1		FALSE	0.213	125.000	0.108	1.000		NA
3062222	3062223	VC274080_0793	VC274080_0792		rluD	TRUE	0.921	3.000	0.168	1.000		NA
3062226	3062227	VC274080_0789	VC274080_0788		pheA	FALSE	0.001	240.000	0.015	NA	N	NA
3062227	3062228	VC274080_0788	VC274080_0787	pheA		FALSE	0.339	143.000	0.044	1.000	Y	NA
3062228	3062229	VC274080_0787	VC274080_0786			TRUE	0.954	-16.000	0.571	1.000	N	NA
3062229	3062230	VC274080_0786	VC274080_0785			FALSE	0.490	-79.000	0.039	NA		NA
3062231	3062232	VC274080_0784	VC274080_0783		slt	TRUE	0.846	10.000	0.167	1.000	N	NA
3062233	3062234	VC274080_0782	VC274080_0781			FALSE	0.091	114.000	0.033	NA		NA
3062235	3062236	VC274080_0780	VC274080_0779	tyrA	aroF	TRUE	0.885	13.000	0.045	1.000	Y	NA
3062237	3062238	VC274080_0778	VC274080_0777			TRUE	0.997	10.000	0.877	0.023	Y	NA
3062240	3062241	VC274080_0775	VC274080_0774			FALSE	0.399	18.000	0.041	NA		NA
3062242	3062243	VC274080_0773	VC274080_0772			FALSE	0.408	16.000	0.034	NA		NA
3062245	3062246	VC274080_0770	VC274080_0769	ispH	fkpB	TRUE	0.821	35.000	0.626	1.000	N	NA
3062246	3062247	VC274080_0769	VC274080_0768	fkpB	lspA	FALSE	0.315	163.000	0.417	1.000	N	NA
3062247	3062248	VC274080_0768	VC274080_0767	lspA	ileS	TRUE	0.677	16.000	0.147	1.000	N	NA
3062248	3062249	VC274080_0767	VC274080_0766	ileS	ribF	TRUE	0.670	31.000	0.254	1.000	N	NA
3062249	3062250	VC274080_0766	VC274080_0765	ribF		FALSE	0.102	69.000	0.009	NA		NA
3062251	3062252	VC274080_1228	VC274080_1229		trpA	FALSE	0.000	316.000	0.018	1.000	N	NA
3062252	3062253	VC274080_1229	VC274080_1230	trpA	trpB	TRUE	0.999	0.000	0.947	0.001	Y	NA
3062253	3062254	VC274080_1230	VC274080_1231	trpB	trpC/F	TRUE	0.960	41.000	0.221	0.001	Y	NA
3062254	3062255	VC274080_1231	VC274080_1232	trpC/F	trpD	TRUE	0.981	6.000	0.293	1.000	Y	NA
3062255	3062256	VC274080_1232	VC274080_1233	trpD	trpG	TRUE	0.833	21.000	0.083	1.000	Y	NA
3062256	3062257	VC274080_1233	VC274080_1234	trpG	trpE	TRUE	0.998	-3.000	0.703	0.001	Y	NA
3062257	3062258	VC274080_1234	VC274080_1235	trpE	trpL	FALSE	0.124	134.000	0.070	NA		NA
3062259	3062260	VC274080_1236	VC274080_1237			TRUE	0.957	3.000	0.281	NA		NA
3062260	3062261	VC274080_1237	VC274080_1238			FALSE	0.438	133.000	0.075	NA	Y	NA
3062262	3062263	VC274080_1239	VC274080_1240	cydC	cydD	TRUE	0.997	-7.000	0.631	0.004	Y	NA
3062263	3062264	VC274080_1240	VC274080_1241	cydD	trxB	FALSE	0.436	120.000	0.049	1.000	Y	NA
3062265	3062266	VC274080_1242	VC274080_1243			TRUE	0.916	-25.000	0.242	NA		NA
3062266	3062267	VC274080_1243	VC274080_1244			FALSE	0.005	258.000	0.000	1.000	N	NA
3062268	3062269	VC274080_1245	VC274080_1246	sanA		FALSE	0.143	72.000	0.058	NA		NA
3062269	3062270	VC274080_1246	VC274080_1247		sfcA	TRUE	0.926	4.000	0.178	NA		NA
3062272	3062273	VC274080_1249	VC274080_1250			FALSE	0.390	55.000	0.128	NA		NA
3062273	3062274	VC274080_1250	VC274080_1251			FALSE	0.010	292.000	0.000	NA		NA
3062274	3062275	VC274080_1251	VC274080_1252			FALSE	0.477	136.000	0.308	NA		NA
3062275	3062276	VC274080_1252	VC274080_1253			FALSE	0.087	65.000	0.018	1.000		NA
3062276	3062277	VC274080_1253	VC274080_1254			FALSE	0.107	100.000	0.044	NA		NA
3062277	3062278	VC274080_1254	VC274080_1255			FALSE	0.459	125.000	0.239	NA		NA
3062279	3062280	VC274080_1256	VC274080_1257			FALSE	0.316	50.000	0.139	NA	N	NA
3062280	3062281	VC274080_1257	VC274080_1259			FALSE	0.049	250.000	0.043	NA	Y	NA
3062282	3062283	VC274080_1966	VC274080_1967	tig		FALSE	0.010	291.000	0.000	NA		NA
3062284	3062285	VC274080_1968	VC274080_1969	dctB	dctD-1	TRUE	0.994	3.000	0.344	0.094	Y	NA
3062286	3062287	VC274080_1970	VC274080_1971	dctM		TRUE	0.993	4.000	0.882	NA	Y	NA
3062287	3062288	VC274080_1971	VC274080_1972		dctP-2	TRUE	0.901	32.000	0.328	NA	Y	NA
3062288	3062289	VC274080_1972	VC274080_1973	dctP-2		FALSE	0.021	232.000	0.000	NA		NA
3062289	3062290	VC274080_1973	VC274080_1974			FALSE	0.028	171.000	0.011	NA		NA
3062291	3062292	VC274080_1975	VC274080_1976			TRUE	0.812	-36.000	0.128	1.000		NA
3062292	3062293	VC274080_1976	VC274080_1977			FALSE	0.208	79.000	0.128	1.000	N	NA
3062293	3062294	VC274080_1977	VC274080_1978			TRUE	0.986	3.000	0.155	0.002		NA
3062294	3062295	VC274080_1978	VC274080_1979			TRUE	0.940	8.000	0.238	1.000		NA
3062295	3062296	VC274080_1979	VC274080_1980			FALSE	0.225	90.000	0.098	NA		NA
3062296	3062297	VC274080_1980	VC274080_1981			FALSE	0.010	294.000	0.000	NA		NA
3062298	3062299	VC274080_1982	VC274080_1983			FALSE	0.007	315.000	0.000	NA		NA
3062299	3062300	VC274080_1983	VC274080_1984			FALSE	0.011	284.000	0.000	NA		NA
3062300	3062301	VC274080_1984	VC274080_1985			TRUE	0.703	-48.000	0.000	NA		NA
3062304	3062305	VC274080_1988	VC274080_1989	pvcB		TRUE	0.981	-15.000	0.414	0.037	N	NA
3062308	3062309	VC274080_1992	VC274080_1993	bisZ	yecK	TRUE	0.981	23.000	0.481	0.037	Y	NA
3062309	3062310	VC274080_1993	VC274080_1994	yecK	chiA-1	FALSE	0.005	255.000	0.000	1.000	N	NA
3062310	3062311	VC274080_1994	VC274080_1995	chiA-1		FALSE	0.004	264.000	0.000	1.000	N	NA
3062312	3062313	VC274080_0755	VC274080_0754			FALSE	0.297	23.000	0.010	NA		NA
3062314	3062315	VC274080_0753	VC274080_0752		mutH	FALSE	0.314	22.000	0.034	NA		NA
3062315	3062316	VC274080_0752	VC274080_0751	mutH		FALSE	0.002	193.000	0.015	1.000	N	NA
3062317	3062318	VC274080_0750	VC274080_0749			TRUE	0.614	51.000	0.250	NA		NA
3062318	3062319	VC274080_0749	VC274080_0748			TRUE	0.800	83.000	1.000	NA		NA
3062319	3062320	VC274080_0748	VC274080_0747			FALSE	0.419	137.000	0.250	NA		NA
3062320	3062321	VC274080_0747	VC274080_0746		lysU	FALSE	0.040	274.000	0.000	0.093	N	NA
3062321	3062322	VC274080_0746	VC274080_0745	lysU	prfB	TRUE	0.952	25.000	0.162	0.042	Y	NA
3062322	3062323	VC274080_0745	VC274080_0744	prfB	brnQ	FALSE	0.002	369.000	0.000	1.000	N	NA
3062324	3062325	VC274080_0743	VC274080_0742		srmB	TRUE	0.842	88.000	0.333	0.014		NA
3062328	3062329	VC274080_0740	VC274080_0738	rimI	holD	TRUE	0.793	-39.000	0.121	1.000		NA
3062329	3062330	VC274080_0738	VC274080_0737	holD		FALSE	0.310	111.000	0.132	1.000		NA
3062330	3062331	VC274080_0737	VC274080_0736			TRUE	0.915	-64.000	0.295	1.000		NA
3062331	3062332	VC274080_0736	VC274080_0735			FALSE	0.446	-103.000	0.015	NA		NA
3062333	3062334	VC274080_0734	VC274080_0733			FALSE	0.148	108.000	0.112	1.000	N	NA
3062334	3062335	VC274080_0733	VC274080_0732			TRUE	0.997	12.000	0.948	0.004	Y	NA
3062336	3062337	VC274080_0731	VC274080_0730			FALSE	0.475	47.000	0.206	1.000	N	NA
3062337	3062338	VC274080_0730	VC274080_0729			FALSE	0.191	87.000	0.087	1.000		NA
3062338	3062339	VC274080_0729	VC274080_0728		pnp	FALSE	0.144	116.000	0.071	1.000		NA
3062339	3062340	VC274080_0728	VC274080_0727	pnp	rpsO	FALSE	0.068	363.000	0.335	1.000	Y	NA
3062340	3062341	VC274080_0727	VC274080_0726	rpsO	truB	TRUE	0.590	142.000	0.211	1.000	Y	NA
3062341	3062342	VC274080_0726	VC274080_0725	truB	rbfA	TRUE	0.984	0.000	0.318	1.000	Y	NA
3062342	3062343	VC274080_0725	VC274080_0724	rbfA	infB	TRUE	0.831	90.000	0.530	1.000	Y	NA
3062343	3062344	VC274080_0724	VC274080_0723	infB	nusA	TRUE	0.795	25.000	0.342	1.000	N	NA
3062344	3062345	VC274080_0723	VC274080_0722	nusA		TRUE	0.945	19.000	0.759	NA		NA
3062349	3062350	VC274080_2548	VC274080_2549			TRUE	0.988	-6.000	0.522	0.015	N	NA
3062350	3062351	VC274080_2549	VC274080_2550		tbpA	TRUE	0.988	10.000	0.697	0.057	N	NA
3062351	3062352	VC274080_2550	VC274080_2551	tbpA	ubiX	FALSE	0.055	262.000	0.000	1.000	Y	NA
3062352	3062353	VC274080_2551	VC274080_2552	ubiX	mpl	TRUE	0.918	7.000	0.235	1.000	N	NA
3062354	3062355	VC274080_2553	VC274080_2554	fbp	ppa	FALSE	0.004	170.000	0.043	1.000	N	NA
3062356	3062357	VC274080_2555	VC274080_2556			TRUE	0.885	11.000	0.167	NA		NA
3062357	3062358	VC274080_2556	VC274080_2557			TRUE	0.975	-3.000	0.575	NA		NA
3062359	3062360	VC274080_2558	VC274080_2559	msrA		FALSE	0.091	82.000	0.019	NA		NA
3062360	3062361	VC274080_2559	VC274080_2560			FALSE	0.025	218.000	0.000	NA		NA
3062361	3062362	VC274080_2560	VC274080_2561			FALSE	0.536	49.000	0.188	NA		NA
3062362	3062363	VC274080_2561	VC274080_2562			TRUE	0.607	82.000	0.336	NA		NA
3062363	3062364	VC274080_2562	VC274080_2563			TRUE	0.987	-9.000	0.605	NA	Y	NA
3062364	3062365	VC274080_2563	VC274080_2564			TRUE	0.594	53.000	0.238	NA		NA
3062365	3062366	VC274080_2564	VC274080_2565			FALSE	0.008	311.000	0.000	NA		NA
3062367	3062368	VC274080_2566	VC274080_2567	cysC	cysN	TRUE	0.977	11.000	0.340	1.000	Y	NA
3062368	3062369	VC274080_2567	VC274080_2568	cysN	cysD	TRUE	0.982	18.000	0.574	0.001	N	NA
3062369	3062370	VC274080_2568	VC274080_2569	cysD	cysG	TRUE	0.803	103.000	0.417	1.000	Y	NA
3062371	3062372	VC274080_2570	VC274080_2571	cpdB		FALSE	0.109	120.000	0.104	1.000	N	NA
3062374	3062375	VC274080_2573	VC274080_2574			TRUE	0.900	3.000	0.132	NA		NA
3062377	3062378	VC274080_2718	VC274080_2717	yjeA		FALSE	0.010	130.000	0.019	1.000	N	NA
3062378	3062379	VC274080_2717	VC274080_2716		secB	FALSE	0.105	167.000	0.158	1.000	N	NA
3062379	3062380	VC274080_2716	VC274080_2715	secB	gpsA	FALSE	0.090	190.000	0.206	1.000	N	NA
3062380	3062381	VC274080_2715	VC274080_2714	gpsA	cysE	TRUE	0.586	73.000	0.429	1.000	N	NA
3062382	3062383	VC274080_2713	VC274080_2712			TRUE	0.917	-51.000	0.286	NA		NA
3062383	3062384	VC274080_2712	VC274080_2711		ppc	FALSE	0.002	359.000	0.000	NA	N	NA
3062384	3062385	VC274080_2711	VC274080_2710	ppc	argE	FALSE	0.003	174.000	0.053	1.000	N	NA
3062386	3062387	VC274080_2709	VC274080_2708	argC	argB	TRUE	0.989	10.000	0.097	0.002	Y	NA
3062387	3062388	VC274080_2708	VC274080_2707	argB	argG	TRUE	0.835	76.000	0.029	0.002	Y	NA
3062388	3062389	VC274080_2707	VC274080_2706	argG	argH	FALSE	0.193	233.000	0.278	1.000	Y	NA
3062390	3062391	VC274080_2705	VC274080_2704			FALSE	0.009	226.000	0.026	NA		NA
3062391	3062392	VC274080_2704	VC274080_2703			TRUE	0.774	72.000	0.204	0.005	N	NA
3062396	3062397	VC274080_2699	VC274080_2698			TRUE	0.964	0.000	0.333	NA		NA
3062397	3062398	VC274080_2698	VC274080_2697			TRUE	0.931	0.000	0.182	NA		NA
3062398	3062399	VC274080_2697	VC274080_2696			TRUE	0.952	-15.000	0.375	NA		NA
3062399	3062400	VC274080_2696	VC274080_2695			TRUE	0.956	-10.000	0.375	NA		NA
3062400	3062401	VC274080_2695	VC274080_2694			TRUE	0.982	3.000	0.692	NA		NA
3062401	3062402	VC274080_2694	VC274080_2693			TRUE	0.953	-3.000	0.281	NA		NA
3062402	3062403	VC274080_2693	VC274080_2692			TRUE	0.785	-7.000	0.000	NA		NA
3062403	3062404	VC274080_2692	VC274080_2691			FALSE	0.287	48.000	0.000	NA		NA
3062404	3062405	VC274080_2691	VC274080_2690			TRUE	0.727	12.000	0.000	NA		NA
3062405	3062406	VC274080_2690	VC274080_2689			TRUE	0.692	126.000	0.667	NA		NA
3062406	3062407	VC274080_2689	VC274080_2688			TRUE	0.872	0.000	0.111	NA		NA
3062407	3062408	VC274080_2688	VC274080_2687			TRUE	0.955	15.000	0.720	NA		NA
3062409	3062410	VC274080_0694	VC274080_0695			TRUE	0.646	97.000	0.130	0.056		NA
3062410	3062411	VC274080_0695	VC274080_0696			TRUE	0.914	84.000	0.374	0.045	Y	NA
3062411	3062412	VC274080_0696	VC274080_0697			TRUE	0.983	0.000	0.303	0.045	N	NA
3062413	3062414	VC274080_0698	VC274080_0699			TRUE	0.887	123.000	0.266	0.015	Y	NA
3062414	3062415	VC274080_0699	VC274080_0700		chb-1	TRUE	0.942	119.000	0.654	0.015	Y	NA
3062415	3062416	VC274080_0700	VC274080_0701	chb-1		TRUE	0.983	-3.000	0.316	1.000	Y	NA
3062416	3062417	VC274080_0701	VC274080_0702			TRUE	0.957	-3.000	0.316	1.000		NA
3062417	3062418	VC274080_0702	VC274080_0703			TRUE	0.690	57.000	0.395	1.000		NA
3062418	3062419	VC274080_0703	VC274080_0704			TRUE	0.982	43.000	0.739	0.001	Y	NA
3062419	3062420	VC274080_0704	VC274080_0705			TRUE	0.993	3.000	0.895	1.000	Y	NA
3062420	3062421	VC274080_0705	VC274080_0706			TRUE	0.997	3.000	0.818	0.045	Y	NA
3062421	3062422	VC274080_0706	VC274080_0707			TRUE	0.832	170.000	0.727	0.045	Y	NA
3062422	3062423	VC274080_0707	VC274080_0708			FALSE	0.001	911.000	0.000	1.000	N	NA
3062423	3062424	VC274080_0708	VC274080_0709			FALSE	0.015	64.000	0.021	1.000	N	NA
3062424	3062425	VC274080_0709	VC274080_0710			FALSE	0.173	73.000	0.071	NA		NA
3062425	3062426	VC274080_0710	VC274080_0711		hemL	FALSE	0.014	254.000	0.000	NA		NA
3062427	3062428	VC274080_0712	VC274080_0713			FALSE	0.089	120.000	0.007	NA		NA
3062428	3062429	VC274080_0713	VC274080_0714			FALSE	0.074	98.000	0.017	1.000		NA
3062429	3062430	VC274080_0714	VC274080_0716			TRUE	0.902	11.000	0.250	NA	N	NA
3062431	3062432	VC274080_A0192	VC274080_A0191	cspA		FALSE	0.005	246.000	0.000	1.000	N	NA
3062435	3062436	VC274080_A0188	VC274080_A0187		tnaA	FALSE	0.003	567.000	0.000	NA		NA
3062436	3062437	VC274080_A0187	VC274080_A0186	tnaA	mtr	TRUE	0.770	78.000	0.308	1.000	Y	NA
3062437	3062438	VC274080_A0186	VC274080_A0185	mtr		FALSE	0.131	196.000	0.312	1.000	N	NA
3062438	3062439	VC274080_A0185	VC274080_A0184			TRUE	0.641	72.000	0.385	NA		NA
3062439	3062440	VC274080_A0184	VC274080_A0183			FALSE	0.095	147.000	0.068	NA		NA
3062440	3062441	VC274080_A0183	VC274080_A0182			TRUE	0.993	0.000	0.123	0.002	Y	NA
3062441	3062442	VC274080_A0182	VC274080_A0181			TRUE	0.997	12.000	0.896	0.002	Y	NA
3062442	3062443	VC274080_A0181	VC274080_A0180			TRUE	0.992	-3.000	0.810	1.000	Y	NA
3062443	3062444	VC274080_A0180	VC274080_A0179			TRUE	0.993	-40.000	0.644	0.060	Y	NA
3062444	3062445	VC274080_A0179	VC274080_A0178			TRUE	0.991	0.000	0.614	1.000	Y	NA
3062446	3062447	VC274080_A0177	VC274080_A0176		def-2	FALSE	0.514	129.000	0.071	0.011	N	NA
3062447	3062448	VC274080_A0176	VC274080_A0175	def-2		FALSE	0.273	148.000	0.179	NA		NA
3062448	3062449	VC274080_A0175	VC274080_A0174			FALSE	0.446	109.000	0.200	NA		NA
3062449	3062450	VC274080_A0174	VC274080_A0173			TRUE	0.830	-10.000	0.114	NA		NA
3062450	3062451	VC274080_A0173	VC274080_A0172			FALSE	0.306	174.000	0.409	NA		NA
3062457	3062458	VC274080_1454	VC274080_1453			TRUE	0.658	35.000	0.200	NA		NA
3062458	3062459	VC274080_1453	VC274080_1452			FALSE	0.330	47.000	0.101	NA		NA
3062460	3062461	VC274080_1451	VC274080_1450			TRUE	0.968	2.000	0.364	NA		NA
3062461	3062462	VC274080_1450	VC274080_1449			TRUE	0.848	18.000	0.237	1.000		NA
3062463	3062464	VC274080_1448	VC274080_1447			TRUE	0.984	0.000	0.800	NA		NA
3062464	3062465	VC274080_1447	VC274080_1446			TRUE	0.847	42.000	0.079	0.092	Y	NA
3062468	3062469	VC274080_1443	VC274080_1442			TRUE	0.914	-3.000	0.222	1.000	N	NA
3062469	3062470	VC274080_1442	VC274080_1441			FALSE	0.129	157.000	0.111	NA		NA
3062472	3062473	VC274080_1440	VC274080_1438	exsB		TRUE	0.908	13.000	0.270	1.000		NA
3062476	3062477	VC274080_1435	VC274080_1434			TRUE	0.916	126.000	0.548	0.045	Y	NA
3062477	3062478	VC274080_1434	VC274080_1433			TRUE	0.985	3.000	0.043	0.015	Y	NA
3062478	3062479	VC274080_1433	VC274080_1432			TRUE	0.773	23.000	0.039	1.000	Y	NA
3062479	3062480	VC274080_1432	VC274080_1431			FALSE	0.016	245.000	0.000	NA		NA
3062480	3062481	VC274080_1431	VC274080_1430			FALSE	0.330	114.000	0.140	NA		NA
3062485	3062486	VC274080_1517	VC274080_1518		ccoP	TRUE	0.646	79.000	0.404	NA		NA
3062486	3062487	VC274080_1518	VC274080_1519	ccoP	ccoQ	TRUE	0.994	8.000	0.636	0.001	N	NA
3062487	3062488	VC274080_1519	VC274080_1520	ccoQ	ccoO	TRUE	0.991	12.000	0.667	0.001	N	NA
3062488	3062489	VC274080_1520	VC274080_1521	ccoO	ccoN	TRUE	0.989	14.000	0.700	0.001	N	NA
3062490	3062491	VC274080_1522	VC274080_1523			TRUE	0.974	-3.000	0.538	NA		NA
3062492	3062493	VC274080_1524	VC274080_1525		rtxD	TRUE	0.986	3.000	0.255	0.005	N	NA
3062493	3062494	VC274080_1525	VC274080_1526	rtxD	rtxB	TRUE	0.974	-45.000	0.277	0.005	N	NA
3062495	3062496	VC274080_1527	VC274080_1528		rtxC	TRUE	0.921	26.000	0.846	NA		NA
3062496	3062497	VC274080_1528	VC274080_1529	rtxC	rtxA	TRUE	0.826	24.000	0.385	1.000	N	NA
3062498	3062499	VC274080_1530	VC274080_1531			FALSE	0.018	238.000	0.000	NA		NA
3062500	3062501	VC274080_1630	VC274080_1631		fumC	FALSE	0.521	16.000	0.063	NA		NA
3062502	3062503	VC274080_1632	VC274080_1633			FALSE	0.147	45.000	0.032	NA		NA
3062503	3062504	VC274080_1633	VC274080_1634			FALSE	0.420	30.000	0.090	NA		NA
3062504	3062505	VC274080_1634	VC274080_1635			FALSE	0.108	156.000	0.097	NA		NA
3062505	3062506	VC274080_1635	VC274080_1636			TRUE	0.986	2.000	1.000	NA		NA
3062506	3062507	VC274080_1636	VC274080_1637			TRUE	0.898	-16.000	0.188	NA		NA
3062507	3062508	VC274080_1637	VC274080_1638			FALSE	0.101	64.000	0.093	1.000	N	NA
3062509	3062510	VC274080_1639	VC274080_1640			TRUE	0.965	-75.000	0.783	NA		NA
3062511	3062512	VC274080_1641	VC274080_1642	sodC		FALSE	0.258	40.000	0.065	NA		NA
3062512	3062513	VC274080_1642	VC274080_1643		katB	TRUE	0.757	64.000	0.652	NA		NA
3062516	3062517	VC274080_1646	VC274080_1647	aldC	alsS	FALSE	0.392	139.000	0.323	1.000	N	NA
3062517	3062518	VC274080_1647	VC274080_1648	alsS		FALSE	0.462	-3.000	0.078	1.000	N	NA
3062518	3062519	VC274080_1648	VC274080_1649			FALSE	0.007	238.000	0.000	NA	N	NA
3062519	3062520	VC274080_1649	VC274080_1650			TRUE	0.724	83.000	0.222	NA	Y	NA
3062521	3062522	VC274080_1651	VC274080_1652	galM	galK	TRUE	0.989	9.000	0.051	0.001	Y	NA
3062522	3062523	VC274080_1652	VC274080_1653	galK	galT	TRUE	0.991	9.000	0.370	0.001	N	NA
3062523	3062524	VC274080_1653	VC274080_1654	galT		FALSE	0.001	390.000	0.000	1.000	N	NA
3062526	3062527	VC274080_1656	VC274080_1657			FALSE	0.528	22.000	0.000	NA		NA
3062531	3062532	VC274080_A0847	VC274080_A0846	deaD		FALSE	0.008	144.000	0.007	1.000	N	NA
3062532	3062533	VC274080_A0846	VC274080_A0845			FALSE	0.231	82.000	0.140	1.000	N	NA
3062534	3062535	VC274080_A0844	VC274080_A0843	gsk-2	creA	FALSE	0.126	119.000	0.060	NA		NA
3062536	3062537	VC274080_A0842	VC274080_A0841			FALSE	0.557	139.000	0.471	NA		NA
3062538	3062539	VC274080_A0840	VC274080_A0839			FALSE	0.102	238.000	0.000	0.040		NA
3062539	3062540	VC274080_A0839	VC274080_A0838			FALSE	0.027	215.000	0.000	NA		NA
3062540	3062541	VC274080_A0838	VC274080_A0837			TRUE	0.987	1.000	1.000	NA		NA
3062542	3062543	VC274080_A0836	VC274080_A0834	orfA	orfB	TRUE	0.985	-3.000	0.000	0.040	Y	NA
3062544	3062545	VC274080_A0835	VC274080_A0833			FALSE	0.033	174.000	0.050	NA		NA
3062546	3062547	VC274080_A0832	VC274080_A0831			FALSE	0.012	274.000	0.000	NA		NA
3062548	3062549	VC274080_A0830	VC274080_A0829			FALSE	0.170	126.000	0.092	1.000		NA
3062549	3062550	VC274080_A0829	VC274080_A0828			FALSE	0.333	169.000	0.385	1.000		NA
3062550	3062551	VC274080_A0828	VC274080_A0827			FALSE	0.087	90.000	0.037	1.000		NA
3062552	3062553	VC274080_A0826	VC274080_A0825			TRUE	0.988	-3.000	0.535	NA	Y	NA
3062554	3062555	VC274080_2603	VC274080_2604	slyD		TRUE	0.614	92.000	0.370	NA		NA
3062555	3062556	VC274080_2604	VC274080_2605		kefB	TRUE	0.960	10.000	0.400	NA		NA
3062556	3062557	VC274080_2605	VC274080_2606	kefB		TRUE	0.976	-19.000	0.927	1.000		NA
3062558	3062559	VC274080_2607	VC274080_2608			TRUE	0.965	1.000	0.333	NA		NA
3062559	3062560	VC274080_2608	VC274080_2609			TRUE	0.718	-3.000	0.056	NA		NA
3062560	3062561	VC274080_2609	VC274080_2610			FALSE	0.426	128.000	0.222	NA		NA
3062561	3062562	VC274080_2610	VC274080_2611		prkB	FALSE	0.557	97.000	0.303	NA		NA
3062562	3062563	VC274080_2611	VC274080_2612	prkB		FALSE	0.006	243.000	0.000	1.000	N	NA
3062564	3062565	VC274080_2613	VC274080_2614		aruD	FALSE	0.291	143.000	0.176	NA		NA
3062565	3062566	VC274080_2614	VC274080_2615	aruD		TRUE	0.967	10.000	0.680	1.000	N	NA
3062566	3062567	VC274080_2615	VC274080_2616		argD	TRUE	0.850	101.000	0.640	1.000	Y	NA
3062567	3062568	VC274080_2616	VC274080_2617	argD	pabA	FALSE	0.018	398.000	0.000	1.000	Y	NA
3062570	3062571	VC274080_2619	VC274080_2620			FALSE	0.012	270.000	0.000	NA		NA
3062571	3062572	VC274080_2620	VC274080_2621		trpS	FALSE	0.005	157.000	0.011	1.000	N	NA
3062572	3062573	VC274080_2621	VC274080_2622	trpS	gph	FALSE	0.378	47.000	0.118	1.000		NA
3062573	3062574	VC274080_2622	VC274080_2623	gph	rpe	FALSE	0.377	20.000	0.050	1.000		NA
3062574	3062575	VC274080_2623	VC274080_2624	rpe	dam	FALSE	0.013	91.000	0.053	1.000	N	NA
3062575	3062576	VC274080_2624	VC274080_2625	dam		FALSE	0.362	70.000	0.191	NA	N	NA
3062576	3062577	VC274080_2625	VC274080_2626		aroB	FALSE	0.018	55.000	0.023	NA	N	NA
3062577	3062578	VC274080_2626	VC274080_2627	aroB	aroK	TRUE	0.954	13.000	0.208	1.000	Y	NA
3062579	3062580	VC274080_0960	VC274080_0961			TRUE	0.976	1.000	0.518	1.000		NA
3062581	3062582	VC274080_0962	VC274080_0963	dxs	ispA	TRUE	0.930	20.000	0.246	1.000	Y	NA
3062582	3062583	VC274080_0963	VC274080_0964	ispA	xseB	FALSE	0.446	42.000	0.177	1.000	N	NA
3062584	3062585	VC274080_0965	VC274080_0966	pomA	pomB	TRUE	0.982	12.000	0.566	1.000	Y	NA
3062585	3062586	VC274080_0966	VC274080_0967	pomB	thiI	FALSE	0.002	208.000	0.029	1.000	N	NA
3062586	3062587	VC274080_0967	VC274080_0968	thiI		FALSE	0.001	622.000	0.000	1.000	N	NA
3062587	3062588	VC274080_0968	VC274080_0969			FALSE	0.476	22.000	0.081	1.000		NA
3062589	3062590	VC274080_0970	VC274080_0971	xni		FALSE	0.576	39.000	0.178	1.000		NA
3062590	3062591	VC274080_0971	VC274080_0972			FALSE	0.026	205.000	0.082	1.000		NA
3062591	3062592	VC274080_0972	VC274080_0973			TRUE	0.866	102.000	0.450	0.012		NA
3062592	3062593	VC274080_0973	VC274080_0974			TRUE	0.688	15.000	0.104	1.000		NA
3062594	3062595	VC274080_0975	VC274080_0976	syd		TRUE	0.972	2.000	0.443	NA		NA
3062596	3062597	VC274080_0977	VC274080_0978	yaeC		TRUE	0.949	19.000	0.321	NA	Y	NA
3062597	3062598	VC274080_0978	VC274080_0979			TRUE	0.986	-10.000	0.584	1.000	Y	NA
3062599	3062600	VC274080_0980	VC274080_0981		treR	FALSE	0.015	65.000	0.045	1.000	N	NA
3062600	3062601	VC274080_0981	VC274080_0982	treR	treB	FALSE	0.010	334.000	0.168	1.000	N	NA
3062601	3062602	VC274080_0982	VC274080_0983	treB	treC	TRUE	0.859	80.000	0.650	1.000	Y	NA
3062603	3062604	VC274080_0984	VC274080_0985			FALSE	0.210	85.000	0.000	NA		NA
3062605	3062606	VC274080_1537	VC274080_1538		orfA	FALSE	0.007	309.000	0.000	1.000		NA
3062606	3062607	VC274080_1538	VC274080_1539	orfA	orfB	TRUE	0.985	-3.000	0.000	0.040	Y	NA
3062608	3062609	VC274080_1540	VC274080_1541			FALSE	0.517	111.000	0.258	NA		NA
3062609	3062610	VC274080_1541	VC274080_1542			TRUE	0.946	5.000	0.236	NA		NA
3062611	3062612	VC274080_1543	VC274080_1544		fabA	FALSE	0.504	65.000	0.290	1.000	N	NA
3062613	3062614	VC274080_1545	VC274080_1546			TRUE	0.826	6.000	0.094	NA		NA
3062614	3062615	VC274080_1546	VC274080_1547			TRUE	0.741	-22.000	0.092	NA		NA
3062615	3062616	VC274080_1547	VC274080_1548			TRUE	0.595	9.000	0.018	NA		NA
3062616	3062617	VC274080_1548	VC274080_1549			TRUE	0.962	-28.000	0.600	NA		NA
3062617	3062618	VC274080_1549	VC274080_1550			FALSE	0.006	357.000	0.000	NA		NA
3062618	3062619	VC274080_1550	VC274080_1551		pyrD	FALSE	0.089	155.000	0.081	NA		NA
3062619	3062620	VC274080_1551	VC274080_1552	pyrD		FALSE	0.013	74.000	0.045	1.000	N	NA
3062620	3062621	VC274080_1552	VC274080_1553			FALSE	0.105	189.000	0.169	NA		NA
3062621	3062622	VC274080_1553	VC274080_1554		pepN	FALSE	0.423	34.000	0.099	NA		NA
3062622	3062623	VC274080_1554	VC274080_1555	pepN		FALSE	0.014	199.000	0.012	NA		NA
3062623	3062624	VC274080_1555	VC274080_1556		prc	FALSE	0.087	109.000	0.021	NA		NA
3062624	3062625	VC274080_1556	VC274080_1557	prc		TRUE	0.597	18.000	0.000	NA		NA
3062626	3062627	VC274080_A0893	VC274080_A0892			FALSE	0.154	131.000	0.000	1.000		NA
3062630	3062631	VC274080_A0889	VC274080_A0888			TRUE	0.898	-48.000	0.231	NA		NA
3062631	3062632	VC274080_A0888	VC274080_A0887		gapA-2	FALSE	0.082	116.000	0.021	NA		NA
3062633	3062634	VC274080_A0886	VC274080_A0885			FALSE	0.016	245.000	0.000	NA		NA
3062635	3062636	VC274080_A0884	VC274080_A0883			FALSE	0.002	740.000	0.000	NA		NA
3062637	3062638	VC274080_A0882	VC274080_A0881			FALSE	0.040	155.000	0.018	NA		NA
3062638	3062639	VC274080_A0881	VC274080_A0880			FALSE	0.112	138.000	0.069	NA		NA
3062639	3062640	VC274080_A0880	VC274080_A0879			FALSE	0.366	38.000	0.098	1.000		NA
3062641	3062642	VC274080_A0878	VC274080_A0877			FALSE	0.547	137.000	0.581	1.000	N	NA
3062644	3062645	VC274080_A0875	VC274080_A0874			TRUE	0.913	2.000	0.148	NA		NA
3062645	3062646	VC274080_A0874	VC274080_A0873		acs-2	FALSE	0.013	74.000	0.060	1.000	N	NA
3062647	3062648	VC274080_A0872	VC274080_A0871	phhA	phhB	TRUE	0.878	-10.000	0.203	1.000	N	NA
3062648	3062649	VC274080_A0871	VC274080_A0870	phhB		FALSE	0.003	471.000	0.000	NA		NA
3062649	3062650	VC274080_A0870	VC274080_A0869		ectA	FALSE	0.097	114.000	0.039	NA		NA
3062650	3062651	VC274080_A0869	VC274080_A0868	ectA	ectB	TRUE	0.984	24.000	0.793	0.001		NA
3062651	3062652	VC274080_A0868	VC274080_A0867	ectB	ectC	TRUE	0.836	36.000	0.572	1.000		NA
3062652	3062653	VC274080_A0867	VC274080_A0866	ectC		TRUE	0.900	-3.000	0.149	1.000		NA
3062654	3062655	VC274080_A0865	VC274080_A0864		groEL-2	FALSE	0.395	33.000	0.000	NA		NA
3062656	3062657	VC274080_2373	VC274080_2374			TRUE	0.720	27.000	0.200	NA		NA
3062659	3062660	VC274080_2376	VC274080_2377	fexB		TRUE	0.800	107.000	0.065	0.012	Y	NA
3062660	3062661	VC274080_2377	VC274080_2378			FALSE	0.086	68.000	0.027	1.000		NA
3062661	3062662	VC274080_2378	VC274080_2379			FALSE	0.295	22.000	0.022	NA		NA
3062663	3062664	VC274080_2380	VC274080_2381	gltB-1	gltD-1	TRUE	0.991	1.000	0.014	0.001	Y	NA
3062664	3062665	VC274080_2381	VC274080_2382	gltD-1	gltB-2	FALSE	0.076	528.000	0.000	0.001	Y	NA
3062665	3062666	VC274080_2382	VC274080_2383	gltB-2	gltD-2	TRUE	0.982	16.000	0.118	0.001	Y	NA
3062666	3062667	VC274080_2383	VC274080_2384	gltD-2		FALSE	0.294	187.000	0.545	NA		NA
3062667	3062668	VC274080_2384	VC274080_2385		pfs	FALSE	0.101	88.000	0.038	NA		NA
3062668	3062669	VC274080_2385	VC274080_2386	pfs		TRUE	0.640	13.000	0.117	1.000	N	NA
3062669	3062670	VC274080_2386	VC274080_2387			TRUE	0.860	1.000	0.148	1.000	N	NA
3062670	3062671	VC274080_2387	VC274080_2388			FALSE	0.480	83.000	0.213	NA		NA
3062671	3062672	VC274080_2388	VC274080_2390			FALSE	0.094	152.000	0.080	NA		NA
3062674	3062675	VC274080_A0094	VC274080_A0095	ptrB	hutR	TRUE	0.972	0.000	0.600	1.000	N	NA
3062675	3062676	VC274080_A0095	VC274080_A0096	hutR		TRUE	0.827	10.000	0.154	1.000	N	NA
3062676	3062677	VC274080_A0096	VC274080_A0097			TRUE	0.919	-3.000	0.173	NA		NA
3062677	3062678	VC274080_A0097	VC274080_A0098			TRUE	0.981	-3.000	0.750	NA		NA
3062680	3062681	VC274080_A0100	VC274080_A0101	pstS	pstC-2	TRUE	0.857	15.000	0.040	1.000	Y	NA
3062681	3062682	VC274080_A0101	VC274080_A0102	pstC-2	pstA-2	TRUE	0.995	0.000	0.219	0.002	Y	NA
3062682	3062683	VC274080_A0102	VC274080_A0103	pstA-2	pstB-2	TRUE	0.981	29.000	0.428	0.002	Y	NA
3062684	3062685	VC274080_A0104	VC274080_A0105			TRUE	0.983	-3.000	0.846	1.000		NA
3062685	3062686	VC274080_A0105	VC274080_A0106			FALSE	0.009	291.000	0.000	1.000		NA
3062686	3062687	VC274080_A0106	VC274080_A0107			FALSE	0.003	435.000	0.000	1.000		NA
3062688	3062689	VC274080_A0108	VC274080_A0109			FALSE	0.044	192.000	0.098	1.000		NA
3062690	3062691	VC274080_A0110	VC274080_A0111			FALSE	0.024	223.000	0.130	1.000	N	NA
3062694	3062695	VC274080_1996	VC274080_1997			FALSE	0.114	164.000	0.156	NA	N	NA
3062695	3062696	VC274080_1997	VC274080_1998			TRUE	0.849	25.000	0.363	NA		NA
3062697	3062698	VC274080_1999	VC274080_2000	minC	minD	TRUE	0.988	3.000	0.466	1.000	Y	NA
3062698	3062699	VC274080_2000	VC274080_2001	minD	minE	TRUE	0.990	5.000	0.618	1.000	Y	NA
3062699	3062700	VC274080_2001	VC274080_2002	minE		FALSE	0.004	289.000	0.000	NA	N	NA
3062701	3062702	VC274080_2003	VC274080_2004			FALSE	0.520	-19.000	0.021	NA		NA
3062703	3062704	VC274080_2005	VC274080_2006			FALSE	0.377	35.000	0.000	NA		NA
3062704	3062705	VC274080_2006	VC274080_2007			FALSE	0.189	4.000	0.062	1.000	N	NA
3062710	3062711	VC274080_2012	VC274080_2013	menE	menC	TRUE	0.984	-24.000	0.283	0.001	N	NA
3062711	3062712	VC274080_2013	VC274080_2014	menC	menB	TRUE	0.914	88.000	0.171	0.001	Y	NA
3062712	3062713	VC274080_2014	VC274080_2015	menB		TRUE	0.956	1.000	0.280	1.000		NA
3062713	3062714	VC274080_2015	VC274080_2016		menD	TRUE	0.952	-10.000	0.355	1.000		NA
3062714	3062715	VC274080_2016	VC274080_2017	menD	menF	TRUE	0.933	-3.000	0.008	1.000	Y	NA
3062716	3062717	VC274080_2018	VC274080_2019			FALSE	0.406	36.000	0.104	1.000		NA
3062717	3062718	VC274080_2019	VC274080_2021		dgt	FALSE	0.390	57.000	0.137	1.000		NA
3062722	3062723	VC274080_0643	VC274080_0642			FALSE	0.140	53.000	0.006	NA		NA
3062723	3062724	VC274080_0642	VC274080_0641		alaS	FALSE	0.231	32.000	0.004	NA		NA
3062724	3062725	VC274080_0641	VC274080_0640	alaS	recX	FALSE	0.056	173.000	0.085	1.000		NA
3062725	3062726	VC274080_0640	VC274080_0639	recX	recA	FALSE	0.477	133.000	0.296	1.000		NA
3062726	3062727	VC274080_0639	VC274080_0638	recA		FALSE	0.142	134.000	0.082	NA		NA
3062727	3062728	VC274080_0638	VC274080_0637		cysA	FALSE	0.030	167.000	0.024	NA		NA
3062728	3062729	VC274080_0637	VC274080_0636	cysA	cysW	TRUE	0.971	-3.000	0.180	1.000	Y	NA
3062729	3062730	VC274080_0636	VC274080_0635	cysW	cysT	TRUE	0.992	11.000	0.583	0.001	N	NA
3062730	3062731	VC274080_0635	VC274080_0634	cysT	cysP	TRUE	0.898	77.000	0.479	0.001	N	NA
3062732	3062733	VC274080_0633	VC274080_0632	cysM	mutS	FALSE	0.004	268.000	0.000	1.000	N	NA
3062734	3062735	VC274080_0631	VC274080_0630	rpoS	nlpD	FALSE	0.165	74.000	0.115	1.000	N	NA
3062735	3062736	VC274080_0630	VC274080_0629	nlpD	pcm	FALSE	0.195	0.000	0.037	1.000	N	NA
3062736	3062737	VC274080_0629	VC274080_0628	pcm	surE	TRUE	0.955	-7.000	0.353	1.000		NA
3062737	3062738	VC274080_0628	VC274080_0627	surE		TRUE	0.903	-37.000	0.235	1.000		NA
3062738	3062739	VC274080_0627	VC274080_0626		ispF	TRUE	0.644	30.000	0.173	1.000		NA
3062739	3062740	VC274080_0626	VC274080_0625	ispF	ispD	TRUE	0.986	-3.000	0.419	1.000	Y	NA
3062740	3062741	VC274080_0625	VC274080_0624	ispD		TRUE	0.889	-3.000	0.185	1.000	N	NA
3062741	3062742	VC274080_0624	VC274080_0623			FALSE	0.013	109.000	0.013	1.000	N	NA
3062742	3062743	VC274080_0623	VC274080_0622		folK-1	TRUE	0.802	-3.000	0.125	1.000	N	NA
3062743	3062744	VC274080_0622	VC274080_0621	folK-1		TRUE	0.988	-3.000	0.500	1.000	Y	NA
3062746	3062747	VC274080_0619	VC274080_0618		gcp	FALSE	0.037	154.000	0.012	1.000		NA
3062751	3062752	VC274080_0595	VC274080_0594		metK	FALSE	0.029	173.000	0.006	NA		NA
3062752	3062753	VC274080_0594	VC274080_0593	metK		FALSE	0.073	119.000	0.030	1.000		NA
3062753	3062754	VC274080_0593	VC274080_0592		dns	FALSE	0.403	128.000	0.210	1.000		NA
3062754	3062755	VC274080_0592	VC274080_0591	dns		FALSE	0.354	138.000	0.201	NA		NA
3062755	3062756	VC274080_0591	VC274080_0590		gshB	TRUE	0.842	14.000	0.173	NA		NA
3062756	3062757	VC274080_0590	VC274080_0589	gshB		TRUE	0.790	-3.000	0.120	NA	N	NA
3062757	3062758	VC274080_0589	VC274080_0588			FALSE	0.457	81.000	0.263	NA	N	NA
3062759	3062760	VC274080_0587	VC274080_0586	tyrS-1		FALSE	0.013	85.000	0.025	1.000	N	NA
3062760	3062761	VC274080_0586	VC274080_0585		pilU	FALSE	0.525	112.000	0.079	0.037	N	NA
3062761	3062762	VC274080_0585	VC274080_0584	pilU	pilT-1	TRUE	0.990	15.000	0.436	0.014	Y	NA
3062763	3062764	VC274080_0583	VC274080_0582		proC	FALSE	0.390	53.000	0.125	NA		NA
3062764	3062765	VC274080_0582	VC274080_0581	proC		FALSE	0.347	54.000	0.117	1.000		NA
3062765	3062766	VC274080_0581	VC274080_0580			TRUE	0.808	0.000	0.081	NA		NA
3062766	3062767	VC274080_0580	VC274080_0579			FALSE	0.255	46.000	0.076	NA		NA
3062767	3062768	VC274080_0579	VC274080_0578			FALSE	0.128	70.000	0.050	NA		NA
3062768	3062769	VC274080_0578	VC274080_0577			TRUE	0.901	-6.000	0.218	1.000	N	NA
3062770	3062771	VC274080_0576	VC274080_0575		trmB	FALSE	0.081	81.000	0.026	1.000		NA
3062772	3062773	VC274080_0574	VC274080_0573	mutY		TRUE	0.729	14.000	0.150	1.000	N	NA
3062773	3062774	VC274080_0573	VC274080_0572		mltC	FALSE	0.042	39.000	0.060	NA	N	NA
3062775	3062776	VC274080_1320	VC274080_1321			FALSE	0.062	179.000	0.102	1.000		NA
3062776	3062777	VC274080_1321	VC274080_1322			FALSE	0.308	48.000	0.100	1.000		NA
3062777	3062778	VC274080_1322	VC274080_1323			FALSE	0.007	231.000	0.000	1.000	N	NA
3062778	3062779	VC274080_1323	VC274080_1324			FALSE	0.013	266.000	0.000	NA		NA
3062780	3062781	VC274080_1325	VC274080_1326			FALSE	0.007	250.000	0.004	NA		NA
3062782	3062783	VC274080_1327	VC274080_1328		nrdB	TRUE	0.726	0.000	0.057	1.000		NA
3062783	3062784	VC274080_1328	VC274080_1329	nrdB	nrdA	TRUE	0.936	60.000	0.200	0.001	Y	NA
3062784	3062785	VC274080_1329	VC274080_1330	nrdA	ubiG	FALSE	0.001	449.000	0.000	1.000	N	NA
3062786	3062787	VC274080_1331	VC274080_1332	gyrA		FALSE	0.026	213.000	0.000	1.000		NA
3062789	3062790	VC274080_1334	VC274080_1335			FALSE	0.178	183.000	0.250	NA		NA
3062790	3062791	VC274080_1335	VC274080_1336		ribA	FALSE	0.074	171.000	0.095	NA		NA
3062791	3062792	VC274080_1336	VC274080_1337	ribA		FALSE	0.060	135.000	0.086	NA	N	NA
3062792	3062793	VC274080_1337	VC274080_1338			FALSE	0.148	207.000	0.436	NA	N	NA
3062793	3062794	VC274080_1338	VC274080_1339			TRUE	0.976	10.000	0.713	NA		NA
3062795	3062796	VC274080_2483	VC274080_2484			FALSE	0.014	200.000	0.034	NA		NA
3062796	3062797	VC274080_2484	VC274080_2485		rpiA	FALSE	0.013	110.000	0.027	1.000	N	NA
3062797	3062798	VC274080_2485	VC274080_2486	rpiA	serA	FALSE	0.001	254.000	0.029	1.000	N	NA
3062799	3062800	VC274080_2487	VC274080_2488	ilvH	ilvI	TRUE	0.997	2.000	0.371	0.001	Y	NA
3062800	3062801	VC274080_2488	VC274080_2489	ilvI		FALSE	0.001	485.000	0.000	1.000	N	NA
3062801	3062802	VC274080_2489	VC274080_2490			FALSE	0.003	177.000	0.050	1.000	N	NA
3062802	3062803	VC274080_2490	VC274080_2491			FALSE	0.004	300.000	0.000	NA	N	NA
3062803	3062804	VC274080_2491	VC274080_2492			TRUE	0.962	-3.000	0.336	NA		NA
3062804	3062805	VC274080_2492	VC274080_2493			FALSE	0.122	127.000	0.068	1.000		NA
3062806	3062807	VC274080_2494	VC274080_2495	leuA	leuB	TRUE	0.893	112.000	0.126	0.001	Y	NA
3062807	3062808	VC274080_2495	VC274080_2496	leuB	leuC	TRUE	0.950	58.000	0.275	0.001	Y	NA
3062808	3062809	VC274080_2496	VC274080_2497	leuC	leuD	TRUE	0.991	16.000	0.309	0.001	Y	NA
3062809	3062810	VC274080_2497	VC274080_2498	leuD		FALSE	0.420	101.000	0.186	NA		NA
3062811	3062812	VC274080_2499	VC274080_2500		rrfB	FALSE	0.291	47.000	0.000	NA		NA
3062812	3062813	VC274080_2500	VC274080_2501	rrfB	rrlB	FALSE	0.170	128.000	0.000	NA		NA
3062815	3062816	VC274080_2503	VC274080_2504			TRUE	0.797	9.000	0.000	NA		NA
3062816	3062817	VC274080_2504	VC274080_2505		rrsB	FALSE	0.233	64.000	0.000	NA		NA
3062818	3062819	VC274080_0561	VC274080_0560			TRUE	0.982	0.000	0.704	NA		NA
3062819	3062820	VC274080_0560	VC274080_0559			FALSE	0.442	14.000	0.027	NA		NA
3062820	3062821	VC274080_0559	VC274080_0558		rpmA	FALSE	0.164	201.000	0.335	1.000		NA
3062821	3062822	VC274080_0558	VC274080_0557	rpmA	rplU	TRUE	0.989	21.000	0.667	0.010	Y	NA
3062824	3062825	VC274080_0555	VC274080_0554		mdh	FALSE	0.001	474.000	0.000	1.000	N	NA
3062826	3062827	VC274080_0553	VC274080_0552	argR		FALSE	0.008	306.000	0.000	NA		NA
3062827	3062828	VC274080_0552	VC274080_0551			FALSE	0.054	171.000	0.073	NA		NA
3062828	3062829	VC274080_0551	VC274080_0550			FALSE	0.335	122.000	0.154	NA		NA
3062829	3062830	VC274080_0550	VC274080_0549			FALSE	0.170	151.000	0.122	NA		NA
3062831	3062832	VC274080_0548	VC274080_0547			FALSE	0.240	147.000	0.151	NA		NA
3062834	3062835	VC274080_0545	VC274080_0544	tldD		TRUE	0.953	0.000	0.259	NA		NA
3062835	3062836	VC274080_0544	VC274080_0543			TRUE	0.960	9.000	0.358	NA		NA
3062836	3062837	VC274080_0543	VC274080_0542			TRUE	0.919	13.000	0.296	NA		NA
3062838	3062839	VC274080_1665	VC274080_1666			TRUE	0.937	12.000	0.464	1.000	N	NA
3062839	3062840	VC274080_1666	VC274080_1667			TRUE	0.982	4.000	0.729	NA		NA
3062840	3062841	VC274080_1667	VC274080_1668			TRUE	0.981	-3.000	0.743	NA		NA
3062843	3062844	VC274080_1670	VC274080_1671	metA		FALSE	0.002	209.000	0.011	1.000	N	NA
3062845	3062846	VC274080_1672	VC274080_1673			FALSE	0.014	199.000	0.024	NA		NA
3062846	3062847	VC274080_1673	VC274080_1674			TRUE	0.736	-3.000	0.062	NA		NA
3062850	3062851	VC274080_1677	VC274080_1678			FALSE	0.155	57.000	0.050	NA		NA
3062854	3062855	VC274080_1474	VC274080_1473			TRUE	0.979	13.000	0.123	0.019	Y	NA
3062855	3062856	VC274080_1473	VC274080_1472		cheB-1	TRUE	0.979	21.000	0.316	0.019	Y	NA
3062856	3062857	VC274080_1472	VC274080_1471	cheB-1		TRUE	0.880	-13.000	0.161	1.000		NA
3062857	3062858	VC274080_1471	VC274080_1470		cheR-1	TRUE	0.895	11.000	0.185	1.000		NA
3062858	3062859	VC274080_1470	VC274080_1469	cheR-1	cheY-2	TRUE	0.985	-3.000	0.370	1.000	Y	NA
3062859	3062860	VC274080_1469	VC274080_1468	cheY-2	cheA-1	TRUE	0.987	-3.000	0.450	1.000	Y	NA
3062860	3062861	VC274080_1468	VC274080_1467	cheA-1		TRUE	0.958	14.000	0.700	NA		NA
3062861	3062862	VC274080_1467	VC274080_1466		cheY-1	TRUE	0.967	-7.000	0.500	NA		NA
3062862	3062863	VC274080_1466	VC274080_1465	cheY-1		TRUE	0.980	8.000	0.290	1.000	Y	NA
3062864	3062865	VC274080_1464	VC274080_1463	sugE	cry2	FALSE	0.007	146.000	0.045	1.000	N	NA
3062865	3062866	VC274080_1463	VC274080_1462	cry2		FALSE	0.005	156.000	0.045	1.000	N	NA
3062868	3062869	VC274080_1461	VC274080_1459		lplA	FALSE	0.019	236.000	0.000	NA		NA
3062869	3062870	VC274080_1459	VC274080_1458	lplA		FALSE	0.011	125.000	0.028	1.000	N	NA
3062870	3062871	VC274080_1458	VC274080_1457			FALSE	0.024	217.000	0.000	1.000		NA
3062871	3062872	VC274080_1457	VC274080_1456		hrpA	FALSE	0.055	140.000	0.036	1.000		NA
3062873	3062874	VC274080_1705	VC274080_1707			FALSE	0.271	171.000	0.308	NA		NA
3062878	3062879	VC274080_1711	VC274080_1712	vieB	vieA	TRUE	0.994	12.000	0.625	0.019	Y	NA
3062879	3062880	VC274080_1712	VC274080_1713	vieA	vieS	TRUE	0.996	5.000	0.462	0.019	Y	NA
3062883	3062884	VC274080_1716	VC274080_1717		sdaC-2	FALSE	0.163	184.000	0.235	NA		NA
3062884	3062885	VC274080_1717	VC274080_1718	sdaC-2		FALSE	0.004	169.000	0.053	NA	N	NA
3062885	3062886	VC274080_1718	VC274080_1719			TRUE	0.990	10.000	0.752	NA	Y	NA
3062886	3062887	VC274080_1719	VC274080_1720			TRUE	0.989	-3.000	0.671	0.089	N	NA
3062888	3062889	VC274080_2036	VC274080_2037	gapA-1		FALSE	0.486	148.000	0.154	1.000	Y	NA
3062889	3062890	VC274080_2037	VC274080_2038			FALSE	0.004	434.000	0.000	NA		NA
3062890	3062891	VC274080_2038	VC274080_2039		rrmA	FALSE	0.071	136.000	0.038	NA		NA
3062891	3062892	VC274080_2039	VC274080_2040	rrmA		FALSE	0.487	21.000	0.074	NA		NA
3062892	3062893	VC274080_2040	VC274080_2041			FALSE	0.097	140.000	0.064	NA		NA
3062894	3062895	VC274080_2042	VC274080_2043	cheV-2		FALSE	0.346	105.000	0.200	1.000	N	NA
3062897	3062898	VC274080_2045	VC274080_2046			TRUE	0.975	7.000	0.583	NA		NA
3062899	3062900	VC274080_2047	VC274080_2048			FALSE	0.004	384.000	0.000	1.000		NA
3062901	3062902	VC274080_2049	VC274080_2050	ptsG		FALSE	0.000	372.000	0.004	NA	N	NA
3062902	3062903	VC274080_2050	VC274080_2051		holB	TRUE	0.948	-9.000	0.110	NA	Y	NA
3062903	3062904	VC274080_2051	VC274080_2052	holB	tmk	TRUE	0.966	-7.000	0.211	0.089	N	NA
3062904	3062905	VC274080_2052	VC274080_2053	tmk		TRUE	0.990	-3.000	0.209	0.001		NA
3062905	3062906	VC274080_2053	VC274080_2054		pabC	TRUE	0.932	-3.000	0.204	1.000		NA
3062906	3062907	VC274080_2054	VC274080_2055	pabC	fabF	FALSE	0.014	364.000	0.187	1.000		NA
3062907	3062908	VC274080_2055	VC274080_2056	fabF	acpP	TRUE	0.786	89.000	0.346	1.000	Y	NA
3062910	3062911	VC274080_1276	VC274080_1277			TRUE	0.973	110.000	0.909	0.001	Y	NA
3062911	3062912	VC274080_1277	VC274080_1278			TRUE	0.985	4.000	0.909	1.000		NA
3062913	3062914	VC274080_A0818	VC274080_1279		galE	TRUE	0.814	13.000	0.133	NA		NA
3062915	3062916	VC274080_1280	VC274080_1281			FALSE	0.045	261.000	0.000	0.097	N	NA
3062917	3062918	VC274080_1282	VC274080_1283			FALSE	0.193	37.000	0.038	NA		NA
3062918	3062919	VC274080_1283	VC274080_1284			FALSE	0.250	37.000	0.064	1.000		NA
3062920	3062921	VC274080_1285	VC274080_1286			FALSE	0.392	104.000	0.231	1.000	N	NA
3062921	3062922	VC274080_1286	VC274080_1287			FALSE	0.030	129.000	0.072	1.000	N	NA
3062922	3062923	VC274080_1287	VC274080_1288			FALSE	0.164	9.000	0.025	1.000	N	NA
3062924	3062925	VC274080_1289	VC274080_1290			TRUE	0.776	9.000	0.082	NA		NA
3062925	3062926	VC274080_1290	VC274080_1291			FALSE	0.023	224.000	0.000	NA		NA
3062926	3062927	VC274080_1291	VC274080_1292			FALSE	0.011	281.000	0.000	NA		NA
3062927	3062928	VC274080_1292	VC274080_1293			TRUE	0.790	74.000	0.339	1.000	Y	NA
3062928	3062929	VC274080_1293	VC274080_1294			TRUE	0.994	2.000	0.273	0.043	Y	NA
3062929	3062930	VC274080_1294	VC274080_1295			TRUE	0.994	-3.000	0.714	0.014		NA
3062932	3062933	VC274080_0796	VC274080_0797	rrfF		FALSE	0.213	74.000	0.000	NA		NA
3062933	3062934	VC274080_0797	VC274080_0798			FALSE	0.040	194.000	0.000	NA		NA
3062934	3062935	VC274080_0798	VC274080_0799		frp	TRUE	0.873	10.000	0.136	NA		NA
3062936	3062937	VC274080_0800	VC274080_0801			TRUE	0.826	3.000	0.093	1.000		NA
3062937	3062938	VC274080_0801	VC274080_0802			FALSE	0.006	151.000	0.025	1.000	N	NA
3062939	3062940	VC274080_0803	VC274080_0804	phoB	phoR	TRUE	0.979	22.000	0.453	0.067	Y	NA
3062940	3062941	VC274080_0804	VC274080_0805	phoR		TRUE	0.872	-3.000	0.168	1.000	N	NA
3062942	3062943	VC274080_0806	VC274080_0807	ppx	ppk	TRUE	0.981	-19.000	0.486	1.000	Y	NA
3062944	3062945	VC274080_0808	VC274080_0809	pstC-1	pstA-1	TRUE	0.985	10.000	0.489	0.097		NA
3062945	3062946	VC274080_0809	VC274080_0810	pstA-1	pstB-1	TRUE	0.997	3.000	0.511	0.002	Y	NA
3062946	3062947	VC274080_0810	VC274080_0811	pstB-1	phoU	TRUE	0.895	34.000	0.330	NA	Y	NA
3062948	3062949	VC274080_0812	VC274080_0813		cutC	FALSE	0.011	203.000	0.024	1.000		NA
3062949	3062950	VC274080_0813	VC274080_0814	cutC		FALSE	0.002	335.000	0.000	1.000	N	NA
3062951	3062952	VC274080_2742	VC274080_2741		rpmE	FALSE	0.097	98.000	0.007	NA		NA
3062953	3062954	VC274080_2740	VC274080_2739	priA		FALSE	0.000	306.000	0.013	1.000	N	NA
3062954	3062955	VC274080_2739	VC274080_2738			FALSE	0.163	173.000	0.245	NA	N	NA
3062955	3062956	VC274080_2738	VC274080_2737		hslV	FALSE	0.136	137.000	0.122	NA	N	NA
3062956	3062957	VC274080_2737	VC274080_2736	hslV	hslU	TRUE	0.887	66.000	0.752	1.000	Y	NA
3062957	3062958	VC274080_2736	VC274080_2735	hslU	menA	FALSE	0.013	104.000	0.051	1.000	N	NA
3062958	3062959	VC274080_2735	VC274080_2734	menA		TRUE	0.659	75.000	0.158	NA	Y	NA
3062960	3062961	VC274080_2733	VC274080_2732		tpiA	FALSE	0.012	118.000	0.016	1.000	N	NA
3062962	3062963	VC274080_2731	VC274080_2730			TRUE	0.847	20.000	0.271	1.000		NA
3062964	3062965	VC274080_2729	VC274080_2728			FALSE	0.099	139.000	0.064	NA		NA
3062966	3062967	VC274080_2727	VC274080_2726	groES-1	groEL-1	TRUE	0.965	54.000	0.631	0.006	Y	NA
3062967	3062968	VC274080_2726	VC274080_2725	groEL-1		FALSE	0.019	196.000	0.046	NA		NA
3062971	3062972	VC274080_2722	VC274080_2721	frdD	frdC	TRUE	0.997	11.000	0.787	0.002	Y	NA
3062972	3062973	VC274080_2721	VC274080_2720	frdC	frdB	TRUE	0.997	3.000	0.454	0.002	Y	NA
3062974	3062975	VC274080_1495	VC274080_1496			FALSE	0.455	145.000	0.333	NA		NA
3062975	3062976	VC274080_1496	VC274080_1497			FALSE	0.358	88.000	0.147	NA		NA
3062978	3062979	VC274080_1499	VC274080_1500			TRUE	0.956	17.000	0.867	NA		NA
3062980	3062981	VC274080_1501	VC274080_1502	potD-1	potD-2	TRUE	0.925	112.000	0.375	0.012	Y	NA
3062981	3062982	VC274080_1502	VC274080_1503	potD-2	potC	TRUE	0.883	34.000	0.047	0.043	Y	NA
3062982	3062983	VC274080_1503	VC274080_1504	potC	potB	TRUE	0.994	0.000	0.286	0.043	Y	NA
3062983	3062984	VC274080_1504	VC274080_1505	potB		FALSE	0.549	-12.000	0.022	NA		NA
3062984	3062985	VC274080_1505	VC274080_1506		potA	TRUE	0.974	-16.000	0.789	NA		NA
3062986	3062987	VC274080_1507	VC274080_1508			TRUE	0.946	-10.000	0.313	NA		NA
3062987	3062988	VC274080_1508	VC274080_1509			TRUE	0.972	2.000	0.448	NA		NA
3062989	3062990	VC274080_1510	VC274080_1511			FALSE	0.077	127.000	0.091	NA	N	NA
3062990	3062991	VC274080_1511	VC274080_1512		fnr	TRUE	0.814	130.000	0.619	1.000	Y	NA
3062991	3062992	VC274080_1512	VC274080_1513	fnr		FALSE	0.341	90.000	0.141	NA		NA
3062992	3062993	VC274080_1513	VC274080_1514		ccoS	TRUE	0.950	-3.000	0.266	NA		NA
3062993	3062994	VC274080_1514	VC274080_1515	ccoS		TRUE	0.992	4.000	0.713	NA	Y	NA
3062994	3062995	VC274080_1515	VC274080_1516			TRUE	0.934	5.000	0.197	NA		NA
3062996	3062997	VC274080_0509	VC274080_0508	cysH	cysI	TRUE	0.731	-7.000	0.116	1.000	N	NA
3062997	3062998	VC274080_0508	VC274080_0507	cysI	cysJ	TRUE	0.998	0.000	0.791	0.001	Y	NA
3062998	3062999	VC274080_0507	VC274080_0506	cysJ		FALSE	0.263	86.000	0.109	NA		NA
3062999	3063000	VC274080_0506	VC274080_0505			TRUE	0.904	-42.000	0.235	NA		NA
3063000	3063001	VC274080_0505	VC274080_0504			FALSE	0.566	-46.000	0.052	NA		NA
3063001	3063002	VC274080_0504	VC274080_0503		pspG	FALSE	0.374	89.000	0.156	NA		NA
3063005	3063006	VC274080_0500	VC274080_0499			TRUE	0.727	10.000	0.112	NA	N	NA
3063007	3063008	VC274080_0498	VC274080_0497		pgi	FALSE	0.031	203.000	0.000	1.000		NA
3063010	3063011	VC274080_0495	VC274080_0494	alr	dnaB	TRUE	0.911	-28.000	0.317	1.000	N	NA
3063013	3063014	VC274080_0492	VC274080_0491	rplI	rpsR	TRUE	0.974	34.000	0.499	0.010	Y	NA
3063014	3063015	VC274080_0491	VC274080_0490	rpsR	priB	TRUE	0.620	16.000	0.128	1.000	N	NA
3063015	3063016	VC274080_0490	VC274080_0489	priB	rpsF	TRUE	0.779	8.000	0.122	1.000	N	NA
3063016	3063017	VC274080_0489	VC274080_0488	rpsF	bfr	FALSE	0.010	212.000	0.000	1.000	N	NA
3063017	3063018	VC274080_0488	VC274080_0487	bfr	bfd	TRUE	0.768	70.000	0.286	NA	Y	NA
3063018	3063019	VC274080_0487	VC274080_0486	bfd		FALSE	0.009	303.000	0.000	NA		NA
3063021	3063022	VC274080_2481	VC274080_2480		ubiH	TRUE	0.735	21.000	0.156	NA		NA
3063022	3063023	VC274080_2480	VC274080_2479	ubiH	visC	TRUE	0.996	12.000	0.474	0.001	Y	NA
3063024	3063025	VC274080_2478	VC274080_2477			FALSE	0.003	607.000	0.000	NA		NA
3063026	3063027	VC274080_2476	VC274080_2475			FALSE	0.468	-52.000	0.024	NA		NA
3063029	3063030	VC274080_2473	VC274080_2472	rpoE	rseA	TRUE	0.948	14.000	0.705	NA	N	NA
3063030	3063031	VC274080_2472	VC274080_2471	rseA	rseB	TRUE	0.992	-3.000	0.856	NA	Y	NA
3063031	3063032	VC274080_2471	VC274080_2470	rseB	rseC	TRUE	0.990	-3.000	0.609	NA	Y	NA
3063032	3063033	VC274080_2470	VC274080_2469	rseC	lepA	FALSE	0.012	113.000	0.045	NA	N	NA
3063033	3063034	VC274080_2469	VC274080_2468	lepA	lepB	FALSE	0.415	92.000	0.187	1.000		NA
3063034	3063035	VC274080_2468	VC274080_2467	lepB	rnc	FALSE	0.494	32.000	0.117	1.000		NA
3063035	3063036	VC274080_2467	VC274080_2466	rnc	era	TRUE	0.968	-7.000	0.127	0.036		NA
3063036	3063037	VC274080_2466	VC274080_2465	era	recO	FALSE	0.261	70.000	0.109	1.000		NA
3063037	3063038	VC274080_2465	VC274080_2464	recO	pdxJ	TRUE	0.868	-3.000	0.166	1.000	N	NA
3063038	3063039	VC274080_2464	VC274080_2463	pdxJ	acpS	TRUE	0.948	4.000	0.326	1.000	N	NA
3063042	3063043	VC274080_0448	VC274080_0449	rplA	rplJ	FALSE	0.329	270.000	0.302	0.012	Y	NA
3063043	3063044	VC274080_0449	VC274080_0450	rplJ	rplL	TRUE	0.965	67.000	0.884	0.010	Y	NA
3063044	3063045	VC274080_0450	VC274080_0451	rplL	rpoB	FALSE	0.369	139.000	0.223	1.000		NA
3063045	3063046	VC274080_0451	VC274080_0452	rpoB	rpoC	TRUE	0.943	105.000	0.851	0.001		NA
3063048	3063049	VC274080_0454	VC274080_0455		hemE	FALSE	0.001	243.000	0.040	1.000	N	NA
3063049	3063050	VC274080_0455	VC274080_0456	hemE		FALSE	0.181	6.000	0.006	1.000	N	NA
3063050	3063051	VC274080_0456	VC274080_0458			FALSE	0.501	87.000	0.234	NA		NA
3063052	3063053	VC274080_0457	VC274080_0459		yibO	FALSE	0.111	169.000	0.170	1.000	N	NA
3063055	3063056	VC274080_1031	VC274080_1030			FALSE	0.407	68.000	0.220	1.000	N	NA
3063056	3063057	VC274080_1030	VC274080_1029			TRUE	0.970	-3.000	0.457	NA		NA
3063057	3063058	VC274080_1029	VC274080_1028			FALSE	0.374	70.000	0.150	NA		NA
3063058	3063059	VC274080_1028	VC274080_1027		cutE	TRUE	0.766	41.000	0.557	1.000	N	NA
3063061	3063062	VC274080_1025	VC274080_1024	leuS	rlpB	FALSE	0.195	150.000	0.182	NA	N	NA
3063062	3063063	VC274080_1024	VC274080_1023	rlpB	holA	TRUE	0.904	6.000	0.199	NA	N	NA
3063063	3063064	VC274080_1023	VC274080_1022	holA		FALSE	0.097	69.000	0.013	NA		NA
3063064	3063065	VC274080_1022	VC274080_1021			TRUE	0.961	3.000	0.307	NA		NA
3063065	3063066	VC274080_1021	VC274080_1020		mrdA	TRUE	0.619	7.000	0.015	NA		NA
3063066	3063067	VC274080_1020	VC274080_1019	mrdA	rodA	FALSE	0.179	-3.000	0.014	1.000	N	NA
3063067	3063068	VC274080_1019	VC274080_1018	rodA		FALSE	0.195	0.000	0.043	NA	N	NA
3063068	3063069	VC274080_1018	VC274080_1017		dacA-1	FALSE	0.484	92.000	0.057	NA	Y	NA
3063070	3063071	VC274080_0664	VC274080_0665			TRUE	0.947	0.000	0.233	1.000		NA
3063071	3063072	VC274080_0665	VC274080_0666		petB	FALSE	0.564	115.000	0.008	0.018		NA
3063072	3063073	VC274080_0666	VC274080_0667	petB	petC	TRUE	0.992	-3.000	0.630	0.035		NA
3063073	3063074	VC274080_0667	VC274080_0668	petC	sspA	FALSE	0.536	100.000	0.370	1.000	N	NA
3063074	3063075	VC274080_0668	VC274080_0669	sspA	sspB	TRUE	0.985	0.000	0.831	NA		NA
3063076	3063077	VC274080_0670	VC274080_0671			TRUE	0.979	3.000	0.613	NA		NA
3063077	3063078	VC274080_0671	VC274080_0672			TRUE	0.897	4.000	0.187	1.000	N	NA
3063078	3063079	VC274080_0672	VC274080_0673			TRUE	0.892	-13.000	0.172	NA		NA
3063084	3063085	VC274080_0678	VC274080_0679			FALSE	0.000	384.000	0.026	1.000	N	NA
3063085	3063086	VC274080_0679	VC274080_0680			TRUE	0.996	6.000	0.688	0.088	Y	NA
3063087	3063088	VC274080_0681	VC274080_0682	panC	panB	TRUE	0.996	11.000	0.395	0.001	Y	NA
3063088	3063089	VC274080_0682	VC274080_0683	panB	folK-2	TRUE	0.963	3.000	0.117	1.000	Y	NA
3063089	3063090	VC274080_0683	VC274080_0684	folK-2	pcnB	TRUE	0.919	-3.000	0.234	1.000	N	NA
3063091	3063092	VC274080_0432	VC274080_0431		rho	FALSE	0.201	99.000	0.000	NA		NA
3063092	3063093	VC274080_0431	VC274080_0430	rho	trxA	FALSE	0.033	198.000	0.087	1.000		NA
3063094	3063095	VC274080_0429	VC274080_0428	rhlB	gppA	TRUE	0.954	8.000	0.406	1.000	N	NA
3063096	3063097	VC274080_0427	VC274080_0426			FALSE	0.556	93.000	0.076	0.053		NA
3063098	3063099	VC274080_0425	VC274080_0424			TRUE	0.965	9.000	0.588	1.000	N	NA
3063099	3063100	VC274080_0424	VC274080_0423		acs-1	FALSE	0.007	152.000	0.063	1.000	N	NA
3063100	3063101	VC274080_0423	VC274080_0422	acs-1	aroQ	FALSE	0.002	380.000	0.000	1.000	N	NA
3063101	3063102	VC274080_0422	VC274080_0421	aroQ	accB	FALSE	0.502	57.000	0.254	1.000	N	NA
3063103	3063104	VC274080_2391	VC274080_2392			FALSE	0.117	147.000	0.000	1.000		NA
3063104	3063105	VC274080_2392	VC274080_2393			TRUE	0.911	1.000	0.150	1.000		NA
3063105	3063106	VC274080_2393	VC274080_2394			TRUE	0.961	13.000	0.667	NA		NA
3063109	3063110	VC274080_2397	VC274080_2398	carB	carA	TRUE	0.991	17.000	0.345	0.001	Y	NA
3063112	3063113	VC274080_2400	VC274080_2401	dapB	mutT	FALSE	0.012	115.000	0.012	1.000	N	NA
3063113	3063114	VC274080_2401	VC274080_2402	mutT	secA	FALSE	0.167	150.000	0.168	1.000	N	NA
3063117	3063118	VC274080_1618	VC274080_1619		bglA	TRUE	0.679	63.000	0.429	1.000		NA
3063121	3063122	VC274080_1622	VC274080_1623			FALSE	0.049	177.000	0.083	1.000		NA
3063122	3063123	VC274080_1623	VC274080_1624			TRUE	0.964	-7.000	0.167	1.000	Y	NA
3063123	3063124	VC274080_1624	VC274080_1625			TRUE	0.978	0.000	0.750	1.000	N	NA
3063124	3063125	VC274080_1625	VC274080_1626			TRUE	0.997	4.000	0.889	0.096	Y	NA
3063125	3063126	VC274080_1626	VC274080_1627			TRUE	0.993	0.000	0.895	1.000	Y	NA
3063127	3063128	VC274080_1628	VC274080_1629	qxtB	qxtA	TRUE	0.997	-3.000	0.886	0.035	Y	NA
3063129	3063130	VC274080_0613	VC274080_0612			TRUE	0.922	-31.000	0.273	NA		NA
3063130	3063131	VC274080_0612	VC274080_0611			FALSE	0.438	142.000	0.300	NA		NA
3063132	3063133	VC274080_0610	VC274080_0609	glmS		TRUE	0.610	63.000	0.412	1.000	N	NA
3063135	3063136	VC274080_0607	VC274080_0606			FALSE	0.007	333.000	0.000	NA		NA
3063136	3063137	VC274080_0606	VC274080_0605		iciA	TRUE	0.590	80.000	0.319	NA		NA
3063139	3063140	VC274080_0603	VC274080_0602		fbaA	FALSE	0.003	296.000	0.000	1.000	N	NA
3063140	3063141	VC274080_0602	VC274080_0601	fbaA	pgk	TRUE	0.650	156.000	0.056	0.005	Y	NA
3063141	3063142	VC274080_0601	VC274080_0600	pgk	epd	TRUE	0.772	134.000	0.070	0.005	Y	NA
3063142	3063143	VC274080_0600	VC274080_0599	epd		FALSE	0.308	20.000	0.033	1.000		NA
3063145	3063146	VC274080_0658	VC274080_0657			TRUE	0.615	83.000	0.349	NA		NA
3063147	3063148	VC274080_0656	VC274080_0655	luxS	gshA	FALSE	0.108	49.000	0.087	1.000	N	NA
3063148	3063149	VC274080_0655	VC274080_0654	gshA		FALSE	0.297	112.000	0.127	1.000		NA
3063149	3063150	VC274080_0654	VC274080_0653			TRUE	0.792	7.000	0.086	1.000		NA
3063150	3063151	VC274080_0653	VC274080_0652			TRUE	0.647	-6.000	0.051	1.000		NA
3063151	3063152	VC274080_0652	VC274080_0651		oadB-1	TRUE	0.791	60.000	0.286	1.000	Y	NA
3063152	3063153	VC274080_0651	VC274080_0650	oadB-1	oadA-1	TRUE	0.998	10.000	0.976	0.002	Y	NA
3063153	3063154	VC274080_0650	VC274080_0649	oadA-1		TRUE	0.988	29.000	0.810	0.002	Y	NA
3063154	3063155	VC274080_0649	VC274080_0648			FALSE	0.005	367.000	0.000	NA		NA
3063155	3063156	VC274080_0648	VC274080_0644			TRUE	0.700	-54.000	0.000	NA		NA
3063156	3063157	VC274080_0644	VC274080_0647			FALSE	0.201	94.000	0.000	NA		NA
3063157	3063158	VC274080_0647	VC274080_0646			FALSE	0.256	57.000	0.000	NA		NA
3063158	3063159	VC274080_0646	VC274080_0645			FALSE	0.214	73.000	0.000	NA		NA
3063160	3063161	VC274080_0685	VC274080_0686			FALSE	0.101	91.000	0.006	NA		NA
3063161	3063162	VC274080_0686	VC274080_0687		dksA	FALSE	0.410	74.000	0.231	1.000	N	NA
3063162	3063163	VC274080_0687	VC274080_0688	dksA	sfsA	FALSE	0.324	125.000	0.151	NA		NA
3063164	3063165	VC274080_0689	VC274080_0690		hrpB	FALSE	0.087	99.000	0.015	NA		NA
3063165	3063166	VC274080_0690	VC274080_0691	hrpB	mrcB	TRUE	0.860	-3.000	0.158	1.000	N	NA
3063166	3063167	VC274080_0691	VC274080_0692	mrcB		FALSE	0.077	237.000	0.000	1.000	Y	NA
3063167	3063168	VC274080_0692	VC274080_0693		acnB	FALSE	0.004	265.000	0.000	1.000	N	NA
3063169	3063170	VC274080_1406	VC274080_1407		prpB	FALSE	0.135	11.000	0.063	1.000	N	NA
3063170	3063171	VC274080_1407	VC274080_1408	prpB	prpC	FALSE	0.274	176.000	0.502	1.000	N	NA
3063171	3063172	VC274080_1408	VC274080_1409	prpC	acnA	TRUE	0.749	96.000	0.289	1.000	Y	NA
3063172	3063173	VC274080_1409	VC274080_1410	acnA	prpF	TRUE	0.978	9.000	0.733	NA		NA
3063173	3063174	VC274080_1410	VC274080_1411	prpF	prpE	TRUE	0.661	-16.000	0.063	NA		NA
3063174	3063175	VC274080_1411	VC274080_1412	prpE		FALSE	0.225	174.000	0.045	0.046		NA
3063175	3063176	VC274080_1412	VC274080_1413			TRUE	0.697	81.000	0.556	1.000		NA
3063177	3063178	VC274080_1414	VC274080_1415			FALSE	0.013	267.000	0.000	NA		NA
3063179	3063180	VC274080_1416	VC274080_1417	hppD		TRUE	0.844	-7.000	0.119	1.000		NA
3063181	3063182	VC274080_A0863	VC274080_A0862		groES-2	TRUE	0.847	29.000	0.069	0.006		NA
3063182	3063183	VC274080_A0862	VC274080_A0861	groES-2		FALSE	0.012	202.000	0.000	1.000	N	NA
3063183	3063184	VC274080_A0861	VC274080_A0860			TRUE	0.747	3.000	0.065	1.000		NA
3063185	3063186	VC274080_A0859	VC274080_A0858		speA	FALSE	0.097	70.000	0.012	NA		NA
3063186	3063187	VC274080_A0858	VC274080_A0857	speA	speB	TRUE	0.945	1.000	0.055	1.000	Y	NA
3063188	3063189	VC274080_A0856	VC274080_A0855			TRUE	0.860	35.000	0.111	0.004		NA
3063189	3063190	VC274080_A0855	VC274080_A0854			FALSE	0.006	328.000	0.000	1.000		NA
3063191	3063192	VC274080_A0853	VC274080_A0852			FALSE	0.011	274.000	0.000	1.000		NA
3063194	3063195	VC274080_2836	VC274080_2835	atpA	atpG	TRUE	0.957	45.000	0.846	0.003		NA
3063195	3063196	VC274080_2835	VC274080_2834	atpG	atpD	TRUE	0.983	35.000	0.724	0.003	Y	NA
3063196	3063197	VC274080_2834	VC274080_2833	atpD	atpC	TRUE	0.993	19.000	0.837	0.003	Y	NA
3063197	3063198	VC274080_2833	VC274080_2832	atpC	glmU	FALSE	0.002	247.000	0.067	1.000	N	NA
3063201	3063202	VC274080_2829	VC274080_2828		fadA	TRUE	0.983	0.000	0.000	0.001		NA
3063202	3063203	VC274080_2828	VC274080_2827	fadA	fadB	TRUE	0.949	26.000	0.607	1.000	Y	NA
3063204	3063205	VC274080_2826	VC274080_2825		trkH-2	TRUE	0.800	20.000	0.202	1.000		NA
3063205	3063206	VC274080_2825	VC274080_2824	trkH-2		TRUE	0.852	23.000	0.455	1.000	N	NA
3063206	3063207	VC274080_2824	VC274080_2823			FALSE	0.121	148.000	0.000	NA		NA
3063208	3063209	VC274080_A0619	VC274080_A0618			FALSE	0.518	-46.000	0.041	NA		NA
3063210	3063211	VC274080_A0617	VC274080_A0616			TRUE	0.670	41.000	0.250	NA		NA
3063211	3063212	VC274080_A0616	VC274080_A0615			FALSE	0.416	61.000	0.154	NA		NA
3063212	3063213	VC274080_A0615	VC274080_A0614			FALSE	0.213	74.000	0.000	NA		NA
3063213	3063214	VC274080_A0614	VC274080_A0613			TRUE	0.959	3.000	0.294	NA		NA
3063214	3063215	VC274080_A0613	VC274080_A0612			TRUE	0.985	-106.000	0.944	1.000	Y	NA
3063215	3063216	VC274080_A0612	VC274080_A0611		pntB	FALSE	0.022	101.000	0.066	1.000	N	NA
3063216	3063217	VC274080_A0611	VC274080_A0610	pntB	pntA	TRUE	0.997	12.000	0.745	0.001	Y	NA
3063217	3063218	VC274080_A0610	VC274080_A0609	pntA		FALSE	0.010	293.000	0.000	NA		NA
3063218	3063219	VC274080_A0609	VC274080_A0608			TRUE	0.917	10.000	0.196	NA		NA
3063221	3063222	VC274080_A0607	VC274080_A0605			FALSE	0.251	75.000	0.103	NA		NA
3063224	3063225	VC274080_1694	VC274080_1695			TRUE	0.941	-78.000	0.452	NA		NA
3063225	3063226	VC274080_1695	VC274080_1696			FALSE	0.000	319.000	0.055	1.000	N	NA
3063227	3063228	VC274080_1697	VC274080_1698			FALSE	0.011	265.000	0.080	NA		NA
3063228	3063229	VC274080_1698	VC274080_1699			TRUE	0.927	12.000	0.287	NA		NA
3063229	3063230	VC274080_1699	VC274080_1700			TRUE	0.951	-25.000	0.160	1.000	Y	NA
3063230	3063231	VC274080_1700	VC274080_1701		rplY	FALSE	0.005	158.000	0.008	1.000	N	NA
3063232	3063233	VC274080_1702	VC274080_1703			FALSE	0.113	92.000	0.048	NA		NA
3063234	3063235	VC274080_1704	VC274080_1706			FALSE	0.004	386.000	0.000	NA		NA
3063236	3063237	VC274080_1305	VC274080_1306		cdd	FALSE	0.049	159.000	0.055	1.000		NA
3063237	3063238	VC274080_1306	VC274080_1307	cdd		FALSE	0.007	170.000	0.066	1.000	N	NA
3063238	3063239	VC274080_1307	VC274080_1308			TRUE	0.847	-9.000	0.124	1.000		NA
3063239	3063240	VC274080_1308	VC274080_1309		sbcB	FALSE	0.581	17.000	0.086	1.000		NA
3063240	3063241	VC274080_1309	VC274080_1310	sbcB		FALSE	0.054	146.000	0.040	1.000		NA
3063242	3063243	VC274080_1311	VC274080_1312			FALSE	0.027	214.000	0.000	NA		NA
3063243	3063244	VC274080_1312	VC274080_1313		cobT	FALSE	0.057	200.000	0.125	NA		NA
3063244	3063245	VC274080_1313	VC274080_1314	cobT	cobS	TRUE	0.988	0.000	0.049	0.004	Y	NA
3063245	3063246	VC274080_1314	VC274080_1315	cobS	cobU	TRUE	0.928	9.000	0.043	1.000	Y	NA
3063246	3063247	VC274080_1315	VC274080_1316	cobU		TRUE	0.853	7.000	0.155	1.000	N	NA
3063247	3063248	VC274080_1316	VC274080_1317		astE	FALSE	0.002	316.000	0.000	1.000	N	NA
3063248	3063249	VC274080_1317	VC274080_1318	astE		FALSE	0.532	69.000	0.333	1.000	N	NA
3063249	3063250	VC274080_1318	VC274080_1319			TRUE	0.979	-13.000	0.356	1.000	Y	NA
3063251	3063252	VC274080_1418	VC274080_1419		hmgA	TRUE	0.773	-7.000	0.000	1.000		NA
3063252	3063253	VC274080_1419	VC274080_1420	hmgA		TRUE	0.973	7.000	0.195	1.000	Y	NA
3063253	3063254	VC274080_1420	VC274080_1422		maiA	TRUE	0.962	-3.000	0.495	1.000	N	NA
3063260	3063261	VC274080_A0604	VC274080_A0603			FALSE	0.010	294.000	0.000	NA		NA
3063262	3063263	VC274080_A0602	VC274080_A0601			TRUE	0.629	58.000	0.308	NA		NA
3063263	3063264	VC274080_A0601	VC274080_A0600			FALSE	0.387	151.000	0.308	NA		NA
3063264	3063265	VC274080_A0600	VC274080_A0599			FALSE	0.179	89.000	0.078	NA		NA
3063265	3063266	VC274080_A0599	VC274080_A0598			FALSE	0.178	168.000	0.176	NA		NA
3063269	3063270	VC274080_A0596	VC274080_A0594			TRUE	0.686	29.000	0.188	NA		NA
3063270	3063271	VC274080_A0594	VC274080_A0593			FALSE	0.008	304.000	0.000	NA		NA
3063271	3063272	VC274080_A0593	VC274080_A0592			FALSE	0.001	560.000	0.000	1.000	N	NA
3063274	3063275	VC274080_2516	VC274080_2517		rluA-1	FALSE	0.460	40.000	0.176	1.000	N	NA
3063275	3063276	VC274080_2517	VC274080_2518	rluA-1	hepA	FALSE	0.465	97.000	0.294	1.000	N	NA
3063276	3063277	VC274080_2518	VC274080_2519	hepA		FALSE	0.020	235.000	0.000	NA		NA
3063278	3063279	VC274080_2520	VC274080_2521		argF	FALSE	0.006	150.000	0.041	1.000	N	NA
3063279	3063280	VC274080_2521	VC274080_2522	argF	pyrB	FALSE	0.215	187.000	0.004	0.003	N	NA
3063280	3063281	VC274080_2522	VC274080_2523	pyrB	pyrI	TRUE	0.992	12.000	0.197	0.001	Y	NA
3063281	3063282	VC274080_2523	VC274080_2524	pyrI		FALSE	0.026	105.000	0.063	NA	N	NA
3063283	3063284	VC274080_2525	VC274080_2526	plsC	murA	FALSE	0.053	22.000	0.033	1.000	N	NA
3063286	3063287	VC274080_2439	VC274080_2440		glnE	FALSE	0.073	64.000	0.083	1.000	N	NA
3063287	3063288	VC274080_2440	VC274080_2441	glnE		FALSE	0.406	124.000	0.025	1.000	Y	NA
3063288	3063289	VC274080_2441	VC274080_2442			FALSE	0.003	440.000	0.000	1.000		NA
3063290	3063291	VC274080_2443	VC274080_2445			TRUE	0.690	143.000	0.937	NA		NA
3063292	3063293	VC274080_1479	VC274080_1480		rhlE-1	FALSE	0.051	182.000	0.000	NA		NA
3063295	3063296	VC274080_1482	VC274080_1483		vceA	TRUE	0.981	14.000	0.833	0.095	N	NA
3063296	3063297	VC274080_1483	VC274080_1484	vceA	vceB	TRUE	0.977	10.000	0.750	1.000		NA
3063298	3063299	VC274080_1485	VC274080_1486			FALSE	0.008	222.000	0.000	1.000	N	NA
3063303	3063304	VC274080_1165	VC274080_1166		lolA	FALSE	0.088	96.000	0.014	NA		NA
3063304	3063305	VC274080_1166	VC274080_1167	lolA		TRUE	0.585	25.000	0.167	1.000	N	NA
3063305	3063306	VC274080_1167	VC274080_1168		serS	FALSE	0.458	104.000	0.078	0.086	N	NA
3063308	3063309	VC274080_1170	VC274080_1171	bioB	bioF	TRUE	0.991	-16.000	0.168	0.002	Y	NA
3063309	3063310	VC274080_1171	VC274080_1172	bioF		TRUE	0.992	-3.000	0.133	0.002	Y	NA
3063311	3063312	VC274080_2355	VC274080_2356		deoA	FALSE	0.395	18.000	0.047	1.000		NA
3063312	3063313	VC274080_2356	VC274080_2357	deoA		TRUE	0.742	168.000	0.385	0.001		NA
3063313	3063314	VC274080_2357	VC274080_2358		deoC	FALSE	0.080	88.000	0.028	1.000		NA
3063316	3063317	VC274080_2360	VC274080_2361			FALSE	0.002	187.000	0.027	NA	N	NA
3063317	3063318	VC274080_2361	VC274080_2362			FALSE	0.466	-55.000	0.023	NA		NA
3063318	3063319	VC274080_2362	VC274080_2363			FALSE	0.249	27.000	0.009	NA		NA
3063319	3063320	VC274080_2363	VC274080_2364			FALSE	0.035	164.000	0.009	NA		NA
3063323	3063324	VC274080_2068	VC274080_2067			FALSE	0.390	35.000	0.093	NA		NA
3063325	3063326	VC274080_2066	VC274080_2065			FALSE	0.247	59.000	0.000	NA		NA
3063326	3063327	VC274080_2065	VC274080_2064			FALSE	0.258	163.000	0.235	NA		NA
3063332	3063333	VC274080_0293	VC274080_0294	rrfE		FALSE	0.296	46.000	0.000	NA		NA
3063336	3063337	VC274080_0297	VC274080_0298			FALSE	0.083	116.000	0.017	NA		NA
3063337	3063338	VC274080_0298	VC274080_0299			TRUE	0.822	12.000	0.174	NA	N	NA
3063338	3063339	VC274080_0299	VC274080_0300			TRUE	0.861	19.000	0.362	1.000	N	NA
3063340	3063341	VC274080_2024	VC274080_2025		rnd	FALSE	0.026	213.000	0.000	1.000		NA
3063341	3063342	VC274080_2025	VC274080_2026	rnd	fadD	FALSE	0.163	86.000	0.115	1.000	N	NA
3063342	3063343	VC274080_2026	VC274080_2027	fadD		FALSE	0.370	125.000	0.184	1.000		NA
3063343	3063344	VC274080_2027	VC274080_2028			TRUE	0.803	-3.000	0.000	1.000		NA
3063344	3063345	VC274080_2028	VC274080_2029			TRUE	0.873	27.000	0.000	0.005		NA
3063345	3063346	VC274080_2029	VC274080_2030			TRUE	0.796	17.000	0.167	NA		NA
3063346	3063347	VC274080_2030	VC274080_2031			FALSE	0.108	60.000	0.018	NA		NA
3063347	3063348	VC274080_2031	VC274080_2032			FALSE	0.523	-3.000	0.082	1.000	N	NA
3063350	3063351	VC274080_0763	VC274080_0762	hlyU	nhaR	FALSE	0.490	199.000	0.210	0.043	Y	NA
3063353	3063354	VC274080_0760	VC274080_0759	thyA	lgt	TRUE	0.842	10.000	0.164	1.000	N	NA
3063354	3063355	VC274080_0759	VC274080_0758	lgt		FALSE	0.218	29.000	0.038	1.000		NA
3063355	3063356	VC274080_0758	VC274080_0757		ptsI	TRUE	0.928	10.000	0.231	1.000		NA
3063357	3063358	VC274080_1893	VC274080_1892	cysS	ruvC	FALSE	0.013	89.000	0.004	1.000	N	NA
3063358	3063359	VC274080_1892	VC274080_1891	ruvC	ruvA	TRUE	0.936	97.000	0.451	0.006	Y	NA
3063359	3063360	VC274080_1891	VC274080_1890	ruvA	ruvB	TRUE	0.971	56.000	0.549	0.001	Y	NA
3063360	3063361	VC274080_1890	VC274080_1889	ruvB	cydA-1	FALSE	0.001	420.000	0.000	1.000	N	NA
3063361	3063362	VC274080_1889	VC274080_1888	cydA-1	cydB-1	TRUE	0.991	18.000	0.750	0.034	Y	NA
3063362	3063363	VC274080_1888	VC274080_1887	cydB-1		FALSE	0.003	539.000	0.000	1.000		NA
3063364	3063365	VC274080_1488	VC274080_1489			FALSE	0.306	44.000	0.000	NA		NA
3063365	3063366	VC274080_1489	VC274080_1490			FALSE	0.170	128.000	0.000	NA		NA
3063366	3063367	VC274080_1490	VC274080_1491		vgrG-1	TRUE	0.951	-45.000	0.500	NA		NA
3063367	3063368	VC274080_1491	VC274080_1492	vgrG-1		TRUE	0.900	-21.000	0.200	NA		NA
3063368	3063369	VC274080_1492	VC274080_1493			TRUE	0.955	3.000	0.267	NA		NA
3063369	3063370	VC274080_1493	VC274080_1494			TRUE	0.957	-3.000	0.308	NA		NA
3063371	3063372	VC274080_1265	VC274080_1264		hutC	FALSE	0.263	117.000	0.120	1.000		NA
3063372	3063373	VC274080_1264	VC274080_1263	hutC	hutI	FALSE	0.079	104.000	0.090	1.000	N	NA
3063373	3063374	VC274080_1263	VC274080_1262	hutI	hutG	TRUE	0.843	-10.000	0.171	1.000	N	NA
3063374	3063375	VC274080_1262	VC274080_1261	hutG	hutU	TRUE	0.977	19.000	0.114	0.001	Y	NA
3063375	3063376	VC274080_1261	VC274080_1260	hutU	hutH	TRUE	0.994	12.000	0.315	0.001	Y	NA
3063376	3063377	VC274080_1260	VC274080_1258	hutH		FALSE	0.048	149.000	0.019	NA		NA
3063378	3063379	VC274080_0815	VC274080_0816		aceB	FALSE	0.001	551.000	0.000	1.000	N	NA
3063379	3063380	VC274080_0816	VC274080_0817	aceB	aceA	FALSE	0.542	130.000	0.129	1.000	Y	NA
3063382	3063383	VC274080_0819	VC274080_0820	queA	tgt	TRUE	0.614	229.000	0.360	0.001	Y	NA
3063386	3063387	VC274080_1615	VC274080_1614			TRUE	0.891	11.000	0.231	NA	N	NA
3063388	3063389	VC274080_1613	VC274080_1612		glpR	TRUE	0.720	28.000	0.286	1.000	N	NA
3063389	3063390	VC274080_1612	VC274080_1611	glpR	ugpC	TRUE	0.764	25.000	0.056	1.000	Y	NA
3063390	3063391	VC274080_1611	VC274080_1610	ugpC	ugpE	TRUE	0.889	53.000	0.160	0.042	Y	NA
3063391	3063392	VC274080_1610	VC274080_1609	ugpE	ugpA	TRUE	0.996	10.000	0.840	0.042	Y	NA
3063392	3063393	VC274080_1609	VC274080_1608	ugpA	ugpB	TRUE	0.950	76.000	0.760	0.042	Y	NA
3063394	3063395	VC274080_2460	VC274080_2459			TRUE	0.948	10.000	0.308	NA		NA
3063395	3063396	VC274080_2459	VC274080_2457			TRUE	0.935	-7.000	0.238	NA		NA
3063397	3063398	VC274080_2458	VC274080_2456			TRUE	0.981	-13.000	0.000	0.018	Y	NA
3063399	3063400	VC274080_2455	VC274080_2454	rumA		FALSE	0.097	64.000	0.009	1.000		NA
3063401	3063402	VC274080_0485	VC274080_0484			TRUE	0.990	10.000	0.804	NA	Y	NA
3063402	3063403	VC274080_0484	VC274080_0483			TRUE	0.992	-3.000	0.790	NA	Y	NA
3063403	3063404	VC274080_0483	VC274080_0482			TRUE	0.940	-3.000	0.220	NA		NA
3063404	3063405	VC274080_0482	VC274080_0481		fkpA	FALSE	0.099	199.000	0.190	NA		NA
3063406	3063407	VC274080_0480	VC274080_0479		slyX	FALSE	0.124	91.000	0.052	NA		NA
3063408	3063409	VC274080_0478	VC274080_0477		hflC	TRUE	0.729	43.000	0.348	NA		NA
3063409	3063410	VC274080_0477	VC274080_0476	hflC	hflK	TRUE	0.998	3.000	0.947	0.008	Y	NA
3063410	3063411	VC274080_0476	VC274080_0475	hflK	hflX	TRUE	0.800	46.000	0.184	0.056		NA
3063412	3063413	VC274080_A0314	VC274080_A0313	infC	thrS	TRUE	0.974	4.000	0.186	1.000	Y	NA
3063413	3063414	VC274080_A0313	VC274080_A0312	thrS		FALSE	0.012	269.000	0.000	NA		NA
3063414	3063415	VC274080_A0312	VC274080_A0311			TRUE	0.979	2.000	0.600	NA		NA
3063415	3063416	VC274080_A0311	VC274080_A0310			TRUE	0.979	0.000	0.600	NA		NA
3063418	3063419	VC274080_A0308	VC274080_A0307			FALSE	0.011	276.000	0.000	NA		NA
3063419	3063420	VC274080_A0307	VC274080_A0306			FALSE	0.230	65.000	0.000	NA		NA
3063421	3063422	VC274080_2536	VC274080_2535			TRUE	0.979	3.000	0.617	NA		NA
3063422	3063423	VC274080_2535	VC274080_2534			TRUE	0.978	0.000	0.598	1.000		NA
3063423	3063424	VC274080_2534	VC274080_2533			FALSE	0.492	50.000	0.226	1.000	N	NA
3063425	3063426	VC274080_2532	VC274080_2531			TRUE	0.989	5.000	0.530	NA	Y	NA
3063426	3063427	VC274080_2531	VC274080_2530			TRUE	0.977	3.000	0.562	NA		NA
3063427	3063428	VC274080_2530	VC274080_2529			TRUE	0.935	1.000	0.188	NA		NA
3063428	3063429	VC274080_2529	VC274080_2528			TRUE	0.957	-3.000	0.308	NA		NA
3063429	3063430	VC274080_2528	VC274080_2527			TRUE	0.964	-7.000	0.453	NA		NA
3063431	3063432	VC274080_1952	VC274080_1953	cysB		FALSE	0.102	86.000	0.038	NA		NA
3063433	3063434	VC274080_1954	VC274080_1955		miaE	FALSE	0.119	62.000	0.039	NA		NA
3063435	3063436	VC274080_1956	VC274080_1957	pyrF		FALSE	0.201	73.000	0.125	1.000	N	NA
3063436	3063437	VC274080_1957	VC274080_1958			TRUE	0.961	12.000	0.576	NA		NA
3063437	3063438	VC274080_1958	VC274080_1959		hipB	FALSE	0.357	139.000	0.208	NA		NA
3063438	3063439	VC274080_1959	VC274080_1960	hipB	rpsA	FALSE	0.034	289.000	0.292	1.000	N	NA
3063440	3063441	VC274080_0836	VC274080_0837	ndk		FALSE	0.125	174.000	0.156	1.000		NA
3063441	3063442	VC274080_0837	VC274080_0838			FALSE	0.009	215.000	0.020	1.000		NA
3063442	3063443	VC274080_0838	VC274080_0839		gcpE	TRUE	0.943	5.000	0.233	1.000		NA
3063443	3063444	VC274080_0839	VC274080_0840	gcpE	hisS	TRUE	0.654	26.000	0.207	1.000	N	NA
3063444	3063445	VC274080_0840	VC274080_0841	hisS		TRUE	0.695	37.000	0.259	1.000		NA
3063445	3063446	VC274080_0841	VC274080_0842			TRUE	0.946	13.000	0.492	1.000		NA
3063447	3063448	VC274080_1686	VC274080_1685			FALSE	0.002	598.000	0.000	1.000		NA
3063448	3063449	VC274080_1685	VC274080_1684			TRUE	0.867	14.000	0.011	1.000	Y	NA
3063449	3063450	VC274080_1684	VC274080_1683		nspC	FALSE	0.177	266.000	0.444	1.000	Y	NA
3063451	3063452	VC274080_0821	VC274080_0822		secD-1	TRUE	0.784	22.000	0.018	NA	Y	NA
3063452	3063453	VC274080_0822	VC274080_0823	secD-1	secF-1	TRUE	0.979	15.000	0.080	0.001	Y	NA
3063455	3063456	VC274080_0825	VC274080_0826			FALSE	0.205	70.000	0.126	1.000	N	NA
3063456	3063457	VC274080_0826	VC274080_0827			TRUE	0.633	105.000	0.424	1.000		NA
3063458	3063459	VC274080_0828	VC274080_0829			TRUE	0.796	37.000	0.448	1.000		NA
3063459	3063460	VC274080_0829	VC274080_0830			TRUE	0.660	61.000	0.359	NA		NA
3063460	3063461	VC274080_0830	VC274080_0831		hscB	TRUE	0.645	120.000	0.500	NA		NA
3063461	3063462	VC274080_0831	VC274080_0832	hscB	hscA	TRUE	0.957	24.000	0.634	1.000	Y	NA
3063462	3063463	VC274080_0832	VC274080_0833	hscA		TRUE	0.952	14.000	0.794	1.000	N	NA
3063463	3063464	VC274080_0833	VC274080_0834			TRUE	0.793	49.000	0.625	1.000		NA
3063464	3063465	VC274080_0834	VC274080_0835		pepB	FALSE	0.133	175.000	0.171	1.000		NA
3063467	3063468	VC274080_A0590	VC274080_A0589			FALSE	0.112	162.000	0.109	NA		NA
3063470	3063471	VC274080_A0587	VC274080_A0586			TRUE	0.979	-3.000	0.676	NA		NA
3063473	3063474	VC274080_0009	VC274080_0008			TRUE	0.947	78.000	0.704	0.041	Y	NA
3063474	3063475	VC274080_0008	VC274080_0007			TRUE	0.997	-3.000	0.455	0.002	Y	NA
3063475	3063476	VC274080_0007	VC274080_0006		rpmH	FALSE	0.007	242.000	0.006	1.000		NA
3063476	3063477	VC274080_0006	VC274080_0005	rpmH	rnpA	TRUE	0.993	13.000	0.787	0.001		NA
3063477	3063478	VC274080_0005	VC274080_0004	rnpA	yidC	FALSE	0.013	227.000	0.105	1.000	N	NA
3063478	3063479	VC274080_0004	VC274080_0003	yidC		FALSE	0.385	137.000	0.221	NA		NA
3063481	3063482	VC274080_0341	VC274080_0340	coaBC		FALSE	0.012	117.000	0.016	1.000	N	NA
3063482	3063483	VC274080_0340	VC274080_0339		htrB	FALSE	0.179	-3.000	0.037	1.000	N	NA
3063483	3063484	VC274080_0339	VC274080_0338	htrB	msbB	TRUE	0.988	11.000	0.091	0.001	Y	NA
3063487	3063488	VC274080_1900	VC274080_1899		priC	TRUE	0.974	1.000	0.474	NA		NA
3063488	3063489	VC274080_1899	VC274080_1898	priC		TRUE	0.957	-15.000	0.434	NA		NA
3063489	3063490	VC274080_1898	VC274080_1897			TRUE	0.606	38.000	0.189	1.000		NA
3063491	3063492	VC274080_A1078	VC274080_A1077		glgX	FALSE	0.102	135.000	0.059	NA		NA
3063493	3063494	VC274080_A1076	VC274080_A1075	ompS		FALSE	0.076	205.000	0.171	1.000		NA
3063495	3063496	VC274080_0437	VC274080_0438	pssA		FALSE	0.554	95.000	0.063	0.045		NA
3063497	3063498	VC274080_0439	VC274080_0440	murB	birA	TRUE	0.909	-3.000	0.211	1.000	N	NA
3063500	3063501	VC274080_0442	VC274080_0443			FALSE	0.365	36.000	0.000	NA		NA
3063501	3063502	VC274080_0443	VC274080_0444			FALSE	0.365	36.000	0.000	NA		NA
3063506	3063507	VC274080_1721	VC274080_1722	hslJ		FALSE	0.030	208.000	0.000	NA		NA
3063507	3063508	VC274080_1722	VC274080_1723			TRUE	0.983	14.000	0.627	0.041		NA
3063508	3063509	VC274080_1723	VC274080_1724			TRUE	0.960	-34.000	0.602	1.000		NA
3063509	3063510	VC274080_1724	VC274080_1725			TRUE	0.956	-7.000	0.359	1.000		NA
3063512	3063513	VC274080_1687	VC274080_1688	nhaA		FALSE	0.004	279.000	0.031	1.000		NA
3063513	3063514	VC274080_1688	VC274080_1689			TRUE	0.955	1.000	0.271	1.000		NA
3063514	3063515	VC274080_1689	VC274080_1690			TRUE	0.968	-19.000	0.842	1.000	N	NA
3063516	3063517	VC274080_2514	VC274080_2513	valS	holC	FALSE	0.075	94.000	0.089	1.000	N	NA
3063517	3063518	VC274080_2513	VC274080_2512	holC	pepA	TRUE	0.607	84.000	0.494	1.000	N	NA
3063520	3063521	VC274080_2060	VC274080_2058		rne	FALSE	0.000	354.000	0.034	1.000	N	NA
3063523	3063524	VC274080_2845	VC274080_2844			TRUE	0.912	15.000	0.339	1.000		NA
3063524	3063525	VC274080_2844	VC274080_2843			TRUE	0.892	27.000	0.827	1.000	N	NA
3063525	3063526	VC274080_2843	VC274080_2842		atpI	FALSE	0.002	190.000	0.056	1.000	N	NA
3063526	3063527	VC274080_2842	VC274080_2841	atpI	atpB	TRUE	0.994	9.000	0.291	0.004	Y	NA
3063527	3063528	VC274080_2841	VC274080_2840	atpB	atpE	TRUE	0.970	44.000	0.557	0.004	Y	NA
3063528	3063529	VC274080_2840	VC274080_2839	atpE	atpF	TRUE	0.959	74.000	0.666	0.003	Y	NA
3063529	3063530	VC274080_2839	VC274080_2838	atpF	atpH	TRUE	0.987	15.000	0.242	0.003	Y	NA
3063530	3063531	VC274080_2838	VC274080_2837	atpH		TRUE	0.991	14.000	0.864	0.003		NA
3063535	3063536	VC274080_2601	VC274080_2602	purA		FALSE	0.076	128.000	0.002	1.000		NA
3063537	3063538	VC274080_2537	VC274080_2538			TRUE	0.650	113.000	0.459	NA		NA
3063538	3063539	VC274080_2538	VC274080_2539			TRUE	0.976	3.000	0.543	NA		NA
3063539	3063540	VC274080_2539	VC274080_2540		rpoN	FALSE	0.454	56.000	0.163	1.000		NA
3063540	3063541	VC274080_2540	VC274080_2541	rpoN		TRUE	0.905	25.000	0.820	NA	N	NA
3063541	3063542	VC274080_2541	VC274080_2542		ptsN	TRUE	0.978	3.000	0.728	NA	N	NA
3063542	3063543	VC274080_2542	VC274080_2543	ptsN		TRUE	0.869	13.000	0.186	NA		NA
3063543	3063544	VC274080_2543	VC274080_2544		ptsO	TRUE	0.917	9.000	0.182	NA		NA
3063545	3063546	VC274080_0471	VC274080_0470	mutL	amiB	TRUE	0.604	7.000	0.092	1.000	N	NA
3063546	3063547	VC274080_0470	VC274080_0469	amiB		TRUE	0.779	-33.000	0.109	NA		NA
3063549	3063550	VC274080_1298	VC274080_1299			TRUE	0.968	-39.000	0.000	0.001		NA
3063550	3063551	VC274080_1299	VC274080_1300		himA	FALSE	0.003	441.000	0.000	1.000		NA
3063552	3063553	VC274080_1301	VC274080_1302			FALSE	0.527	67.000	0.235	NA		NA
3063557	3063558	VC274080_1476	VC274080_1477			TRUE	0.913	97.000	0.333	0.018	Y	NA
3063558	3063559	VC274080_1477	VC274080_1478			FALSE	0.035	182.000	0.068	1.000		NA
3063560	3063561	VC274080_1946	VC274080_1945	dsbB	nhaB	TRUE	0.702	80.000	0.723	1.000	N	NA
3063566	3063567	VC274080_0100	VC274080_0101		glpG	FALSE	0.005	375.000	0.000	1.000		NA
3063567	3063568	VC274080_0101	VC274080_0102	glpG	glpE	TRUE	0.966	7.000	0.405	1.000		NA
3063570	3063571	VC274080_0662	VC274080_0661		htrA	FALSE	0.361	129.000	0.183	NA		NA
3063571	3063572	VC274080_0661	VC274080_0660	htrA	degS	TRUE	0.750	177.000	0.310	0.003	Y	NA
3063575	3063576	VC274080_0467	VC274080_0466			FALSE	0.377	35.000	0.000	NA		NA
3063576	3063577	VC274080_0466	VC274080_0465		orn	FALSE	0.091	159.000	0.000	NA		NA
3063578	3063579	VC274080_0464	VC274080_0463	rsgA	psd	FALSE	0.203	96.000	0.095	1.000		NA
3063579	3063580	VC274080_0463	VC274080_0462	psd		FALSE	0.028	208.000	0.000	1.000		NA
3063581	3063582	VC274080_2453	VC274080_2452	relA	mazG	FALSE	0.095	79.000	0.004	1.000		NA
3063584	3063585	VC274080_2450	VC274080_2449	pyrG		FALSE	0.153	79.000	0.068	1.000		NA
3063586	3063587	VC274080_1664	VC274080_1663			TRUE	0.990	0.000	0.174	0.064	Y	NA
3063587	3063588	VC274080_1663	VC274080_1662			TRUE	0.762	66.000	0.261	1.000	Y	NA
3063588	3063589	VC274080_1662	VC274080_1661			TRUE	0.913	28.000	0.333	1.000	Y	NA
3063590	3063591	VC274080_2747	VC274080_2746		metB	TRUE	0.974	13.000	0.428	1.000	Y	NA
3063595	3063596	VC274080_2752	VC274080_2753	pfkA		FALSE	0.001	230.000	0.040	1.000	N	NA
3063596	3063597	VC274080_2753	VC274080_2754			FALSE	0.110	198.000	0.028	NA	Y	NA
3063598	3063599	VC274080_1961	VC274080_1962		ppiD	FALSE	0.009	135.000	0.033	1.000	N	NA
3063599	3063600	VC274080_1962	VC274080_1963	ppiD	hupB	FALSE	0.006	153.000	0.051	1.000	N	NA
3063600	3063601	VC274080_1963	VC274080_1964	hupB	lon	FALSE	0.017	184.000	0.030	1.000		NA
3063602	3063603	VC274080_0436	VC274080_0435			TRUE	0.986	16.000	0.344	0.033	Y	NA
3063603	3063604	VC274080_0435	VC274080_0434			FALSE	0.179	-3.000	0.033	1.000	N	NA
3063604	3063605	VC274080_0434	VC274080_0433			FALSE	0.091	82.000	0.018	NA		NA
3063607	3063608	VC274080_1226	VC274080_1225			FALSE	0.109	126.000	0.055	NA		NA
3063609	3063610	VC274080_A0585	VC274080_A0584			FALSE	0.007	327.000	0.000	NA		NA
3063610	3063611	VC274080_A0584	VC274080_A0583			TRUE	0.705	134.000	0.800	NA		NA
3063615	3063616	VC274080_2437	VC274080_2436		parE	FALSE	0.023	329.000	0.217	NA		NA
3063616	3063617	VC274080_2436	VC274080_2435	parE		TRUE	0.984	4.000	0.106	0.001		NA
3063620	3063621	VC274080_1175	VC274080_1176	htpX		FALSE	0.029	210.000	0.000	NA		NA
3063621	3063622	VC274080_1176	VC274080_1177			TRUE	0.974	-3.000	0.533	NA		NA
3063622	3063623	VC274080_1177	VC274080_1178			TRUE	0.966	14.000	0.217	0.017		NA
3063626	3063627	VC274080_2508	VC274080_2507			FALSE	0.025	219.000	0.000	NA		NA
3063627	3063628	VC274080_2507	VC274080_2506			FALSE	0.053	180.000	0.000	NA		NA
3063633	3063634	VC274080_1940	VC274080_1941			TRUE	0.881	52.000	0.333	0.018		NA
3063634	3063635	VC274080_1941	VC274080_1942			FALSE	0.066	170.000	0.000	1.000		NA
3063641	3063642	VC274080_0616	VC274080_0615	rpoD		FALSE	0.129	145.000	0.000	NA		NA
3063642	3063643	VC274080_0615	VC274080_0614			FALSE	0.003	469.000	0.000	NA		NA
3063647	3063648	VC274080_2371	VC274080_2372			TRUE	0.825	41.000	0.034	0.001		NA
3063649	3063650	VC274080_1883	VC274080_1884	tolB	tolA	TRUE	0.647	15.000	0.089	NA		NA
3063650	3063651	VC274080_1884	VC274080_1885	tolA	tolR	TRUE	0.737	18.000	0.183	NA	N	NA
3063651	3063652	VC274080_1885	VC274080_1886	tolR	tolQ	TRUE	0.996	3.000	0.556	0.051	Y	NA
3063654	3063655	VC274080_1658	VC274080_1660			FALSE	0.333	115.000	0.143	NA		NA
3063656	3063657	VC274080_1296	VC274080_1297	pheS	pheT	TRUE	0.987	27.000	0.574	0.001	Y	NA
3063658	3063659	VC274080_0571	VC274080_0570	imp		FALSE	0.498	53.000	0.182	1.000		NA
3063660	3063661	VC274080_2589	VC274080_2590	rplV	rpsS	TRUE	0.996	11.000	0.769	0.011	Y	NA
3063661	3063662	VC274080_2590	VC274080_2591	rpsS	rplB	TRUE	0.991	21.000	0.820	0.011	Y	NA
3063662	3063663	VC274080_2591	VC274080_2592	rplB	rplW	TRUE	0.993	17.000	0.849	0.011	Y	NA
3063663	3063664	VC274080_2592	VC274080_2593	rplW	rplD	TRUE	0.996	-3.000	0.513	0.010	Y	NA
3063665	3063666	VC274080_1340	VC274080_1341			FALSE	0.011	250.000	0.070	NA		NA
3063668	3063669	VC274080_B0068	VC274080_B0069			FALSE	0.563	20.000	0.000	NA		NA
3063669	3063670	VC274080_B0069	VC274080_B0070			TRUE	0.728	136.000	1.000	NA		NA
3063670	3063671	VC274080_B0070	VC274080_B0071			FALSE	0.212	78.000	0.000	NA		NA
3063673	3063674	VC274080_2818	VC274080_2817			FALSE	0.563	20.000	0.000	NA		NA
3063674	3063675	VC274080_2817	VC274080_2816			FALSE	0.410	31.000	0.000	NA		NA
3063675	3063676	VC274080_2816	VC274080_2815			TRUE	0.815	6.000	0.000	NA		NA
3063678	3063679	VC274080_1267	VC274080_1266			TRUE	0.936	5.000	0.203	NA		NA
3063680	3063681	VC274080_1404	VC274080_1403			FALSE	0.296	198.000	0.690	NA		NA
3063681	3063682	VC274080_1403	VC274080_1402			TRUE	0.980	10.000	0.844	NA		NA
3063685	3063686	VC274080_1895	VC274080_1896		ompT	TRUE	0.725	119.000	0.714	NA		NA
3063688	3063689	VC274080_0002	VC274080_0001		mioC	FALSE	0.533	10.000	0.023	1.000		NA
3063690	3063691	VC274080_1221	VC274080_1222			TRUE	0.922	9.000	0.192	NA		NA
3063692	3063693	VC274080_2585	VC274080_2584	rpsH	rplF	TRUE	0.994	15.000	0.808	0.010	Y	NA
3063693	3063694	VC274080_2584	VC274080_2583	rplF	rplR	TRUE	0.997	10.000	0.815	0.010	Y	NA
3063694	3063695	VC274080_2583	VC274080_2582	rplR	rpsE	TRUE	0.988	15.000	0.814	0.010		NA
3063696	3063697	VC274080_2822	VC274080_2821			FALSE	0.563	20.000	0.000	NA		NA
3063697	3063698	VC274080_2821	VC274080_2820			FALSE	0.410	31.000	0.000	NA		NA
3063703	3063704	VC274080_0461	VC274080_0460			TRUE	0.641	98.000	0.143	0.092		NA
3063705	3063706	VC274080_0565	VC274080_0566	apaG	ksgA	FALSE	0.065	72.000	0.078	NA	N	NA
3063706	3063707	VC274080_0566	VC274080_0567	ksgA		TRUE	0.860	14.000	0.197	1.000		NA
3063708	3063709	VC274080_2070	VC274080_2069	topB		FALSE	0.323	21.000	0.011	NA		NA
3063710	3063711	VC274080_0474	VC274080_0473			FALSE	0.566	33.000	0.141	NA		NA
3063711	3063712	VC274080_0473	VC274080_0472		miaA	FALSE	0.367	172.000	0.531	1.000		NA
3063713	3063714	VC274080_2190	VC274080_2191	prfA	hemA	TRUE	0.852	30.000	0.171	0.038	N	NA
3063721	3063722	VC274080_B0039	VC274080_B0041			FALSE	0.026	216.000	0.000	NA		NA
3063726	3063727	VC274080_A0304	VC274080_A0305			TRUE	0.739	46.000	0.400	NA		NA
3063730	3063731	VC274080_1536	VC274080_1535			FALSE	0.018	238.000	0.000	NA		NA
3063732	3063733	VC274080_2277	VC274080_2276			FALSE	0.135	49.000	0.004	1.000		NA
3063737	3063738	VC274080_1273	VC274080_1274	uvrC		FALSE	0.273	48.000	0.000	1.000		NA
3063739	3063740	VC274080_2367	VC274080_2368			FALSE	0.002	369.000	0.012	1.000		NA
3063741	3063742	VC274080_0568	VC274080_0569	pdxA	surA	TRUE	0.967	-10.000	0.561	1.000		NA
3063746	3063747	VC274080_1224	VC274080_1223			FALSE	0.082	120.000	0.030	NA		NA
3063748	3063749	VC274080_2369	VC274080_2370		thrB	TRUE	0.941	-3.000	0.233	1.000		NA
3063750	3063751	VC274080_1682	VC274080_1681			TRUE	0.830	2.000	0.000	NA		NA
3063752	3063753	VC274080_0343	VC274080_0344		radC	FALSE	0.435	112.000	0.200	1.000		NA
3063755	3063756	VC274080_2594	VC274080_2595			TRUE	0.968	8.000	0.000	0.014		NA
3063757	3063758	VC274080_2577	VC274080_2575		fklB	FALSE	0.240	142.000	0.141	NA		NA
3063760	3063761	VC274080_1272	VC274080_1271			TRUE	0.968	0.000	0.086	0.035		NA
3063765	3063766	VC274080_1032	VC274080_1034			FALSE	0.442	109.000	0.203	1.000		NA
3063768	3063769	VC274080_2588	VC274080_2587	rplN	rplX	TRUE	0.990	13.000	0.810	0.010		NA
3063769	3063770	VC274080_2587	VC274080_2586	rplX	rplE	TRUE	0.987	25.000	0.758	0.010	Y	NA
3063771	3063772	VC274080_A0255	VC274080_A0253		vctG	TRUE	0.985	3.000	0.870	1.000		NA
3063773	3063774	VC274080_B0018	VC274080_B0019			FALSE	0.320	42.000	0.000	NA		NA
3063775	3063776	VC274080_2581	VC274080_2580	rpmD	rplO	TRUE	0.998	6.000	0.653	0.002	Y	NA
3063776	3063777	VC274080_2580	VC274080_2579	rplO		TRUE	0.931	21.000	0.730	1.000		NA
3063778	3063779	VC274080_2576	VC274080_2578	rplQ	rpoA	TRUE	0.897	27.000	0.873	1.000	N	NA
3063780	3063781	VC274080_A0315	VC274080_A0316	rpmI	rplT	TRUE	0.979	42.000	0.928	0.010	Y	NA
3063784	3063785	VC274080_0103	VC274080_0104			TRUE	0.772	56.000	0.600	NA		NA
3063787	3063788	VC274080_2072	VC274080_2071			FALSE	0.199	85.000	0.000	1.000		NA
3063792	3063793	VC274080_B0049	VC274080_B0050			TRUE	0.980	10.000	0.844	NA		NA
3063794	3063795	VC274080_B0004	VC274080_B0005		hemC	TRUE	0.857	61.000	0.205	0.002		NA
3063798	3063799	VC274080_B0054	VC274080_B0055		torT	FALSE	0.159	55.000	0.049	NA		NA
3063801	3063802	VC274080_1343	VC274080_1342			FALSE	0.232	64.000	0.089	NA		NA
3063804	3063805	VC274080_B0042	VC274080_B0043			FALSE	0.039	196.000	0.000	NA		NA
3063806	3063807	VC274080_0720	VC274080_0721			TRUE	0.780	26.000	0.260	1.000		NA
3063809	3063810	VC274080_0447	VC274080_0446	rplK	nusG	TRUE	0.677	131.000	0.681	1.000		NA
3063810	3063811	VC274080_0446	VC274080_0445	nusG	secE	TRUE	0.957	16.000	0.843	1.000		NA
3063813	3063814	VC274080_0107	VC274080_0106			FALSE	0.075	104.000	0.024	1.000		NA
3063815	3063816	VC274080_B0056	VC274080_B0057			FALSE	0.108	150.000	0.000	1.000		NA
3063820	3063821	VC274080_B0021	VC274080_B0022			FALSE	0.419	30.000	0.000	NA		NA
3063823	3063824	VC274080_A0823	VC274080_A0824			FALSE	0.371	164.000	0.400	NA		NA
3063828	3063829	VC274080_0284	VC274080_0285			FALSE	0.155	135.000	0.000	NA		NA
3063831	3063832	VC274080_1950	VC274080_1951			FALSE	0.252	62.000	0.094	NA		NA