MicrobesOnline Operon Predictions for Yersinia pestis CA88-4125

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column	Description
Gene1	VIMSS id of 1st gene in pair
SysName1	Systematic name of 1st gene in pair
Name1	Ordinary name of 1st gene in pair
Gene2	VIMSS id of 2nd gene in pair
SysName2	Systematic name of 2nd gene in pair
Name2	Ordinary name of 2nd gene in pair
bOp	Whether the pair is predicted to lie in the same operon or not
pOp	Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep	Distance between the two genes, in base pairs
MOGScore	Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore	Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim	Whether the genes share a COG category or not
ExprSim	Correlation of expression patterns (not available for most genomes)

Gene1	Gene2	SysName1	SysName2	Name1	Name2	bOp	pOp	Sep	MOGScore	GOScore	COGSim	ExprSim
4586327	4586328	YPE_0001	YPE_0002			FALSE	0.265	108.000	0.000	NA		NA
4586329	4586330	YPE_0003	YPE_0004		pssA	TRUE	0.599	62.000	0.089	NA		NA
4586330	4586331	YPE_0004	YPE_0005	pssA	yfiQ	TRUE	0.458	173.000	0.121	0.054	N	NA
4586331	4586332	YPE_0005	YPE_0006	yfiQ		TRUE	0.871	43.000	0.222	NA		NA
4586332	4586333	YPE_0006	YPE_0007		trxC	FALSE	0.334	170.000	0.084	NA		NA
4586335	4586336	YPE_0009	YPE_0010	emrB	emrA	TRUE	0.977	39.000	0.875	1.000	N	NA
4586336	4586337	YPE_0010	YPE_0011	emrA	mprA	FALSE	0.048	384.000	0.107	1.000	N	NA
4586337	4586338	YPE_0011	YPE_0012	mprA		FALSE	0.283	172.000	0.065	NA		NA
4586338	4586339	YPE_0012	YPE_0013			TRUE	0.998	-3.000	0.915	NA		NA
4586339	4586340	YPE_0013	YPE_0014			FALSE	0.159	160.000	0.060	NA	N	NA
4586340	4586341	YPE_0014	YPE_0015			FALSE	0.107	228.000	0.000	NA		NA
4586341	4586342	YPE_0015	YPE_0016			TRUE	0.901	29.000	0.203	NA		NA
4586342	4586343	YPE_0016	YPE_0017			TRUE	0.975	-3.000	0.122	NA		NA
4586344	4586345	YPE_0018	YPE_0019			TRUE	0.912	2.000	0.000	NA		NA
4586345	4586346	YPE_0019	YPE_0020			FALSE	0.261	111.000	0.000	NA		NA
4586346	4586347	YPE_0020	YPE_0021			TRUE	0.998	13.000	0.765	0.074	Y	NA
4586347	4586348	YPE_0021	YPE_0022			TRUE	0.999	-3.000	0.433	0.021	Y	NA
4586348	4586349	YPE_0022	YPE_0023			TRUE	0.998	-19.000	0.532	1.000	Y	NA
4586349	4586350	YPE_0023	YPE_0025			TRUE	0.614	32.000	0.000	NA		NA
4586352	4586353	YPE_0026	YPE_0027			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4586354	4586355	YPE_0029	YPE_0030		hxuB	FALSE	0.005	1089.000	0.000	NA	N	NA
4586355	4586356	YPE_0030	YPE_0031	hxuB	hmwA	TRUE	0.850	41.000	0.188	NA		NA
4586356	4586357	YPE_0031	YPE_0032	hmwA	hmwC	TRUE	0.464	155.000	0.125	1.000		NA
4586357	4586358	YPE_0032	YPE_0033	hmwC		TRUE	0.918	2.000	0.000	1.000		NA
4586360	4586361	YPE_0035	YPE_0036	gmhA		TRUE	0.517	203.000	0.229	1.000		NA
4586363	4586364	YPE_0038	YPE_0039	nqrA	nqrB	TRUE	0.999	4.000	0.854	0.002	Y	NA
4586364	4586365	YPE_0039	YPE_0040	nqrB	nqrC	TRUE	0.999	-10.000	0.603	0.002	Y	NA
4586365	4586366	YPE_0040	YPE_0041	nqrC	nqrD	TRUE	0.999	-7.000	0.312	0.002	Y	NA
4586366	4586367	YPE_0041	YPE_0042	nqrD	nqrE	TRUE	0.995	7.000	0.188	0.002	Y	NA
4586367	4586368	YPE_0042	YPE_0043	nqrE	nqrF	TRUE	0.997	16.000	0.551	0.002	Y	NA
4586368	4586369	YPE_0043	YPE_0044	nqrF	apbE	TRUE	0.942	41.000	0.519	1.000	N	NA
4586369	4586370	YPE_0044	YPE_0045	apbE		TRUE	0.983	13.000	0.481	NA		NA
4586374	4586375	YPE_0049	YPE_0050			FALSE	0.015	722.000	0.000	NA		NA
4586376	4586377	YPE_0051	YPE_0052			FALSE	0.155	197.000	0.000	NA		NA
4586378	4586379	YPE_0053	YPE_0054	gpt		TRUE	0.477	127.000	0.120	NA		NA
4586379	4586380	YPE_0054	YPE_0055		crl	TRUE	0.628	60.000	0.095	NA		NA
4586380	4586381	YPE_0055	YPE_0056	crl	proB	TRUE	0.629	177.000	0.262	NA		NA
4586381	4586382	YPE_0056	YPE_0057	proB	proA	TRUE	0.985	10.000	0.026	0.001	Y	NA
4586382	4586383	YPE_0057	YPE_0058	proA		FALSE	0.015	328.000	0.000	NA	N	NA
4586383	4586384	YPE_0058	YPE_0059			FALSE	0.226	183.000	0.053	NA		NA
4586384	4586385	YPE_0059	YPE_0060			FALSE	0.087	246.000	0.000	NA		NA
4586387	4586388	YPE_0062	YPE_0063		aroL	FALSE	0.035	247.000	0.000	1.000	N	NA
4586388	4586389	YPE_0063	YPE_0064	aroL		FALSE	0.076	256.000	0.000	NA		NA
4586389	4586390	YPE_0064	YPE_0065			FALSE	0.403	64.000	0.000	NA		NA
4586392	4586393	YPE_0067	YPE_0068			FALSE	0.006	732.000	0.000	1.000	N	NA
4586393	4586394	YPE_0068	YPE_0069			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4586396	4586397	YPE_0071	YPE_0072	phoB	phoR	TRUE	0.993	25.000	0.453	0.088	Y	NA
4586397	4586398	YPE_0072	YPE_0073	phoR		TRUE	0.870	22.000	0.168	1.000	N	NA
4586398	4586399	YPE_0073	YPE_0074		brnQ	FALSE	0.009	474.000	0.000	1.000	N	NA
4586399	4586400	YPE_0074	YPE_0075	brnQ	proY	TRUE	0.951	76.000	0.261	0.089	Y	NA
4586400	4586401	YPE_0075	YPE_0076	proY	malZ	FALSE	0.034	561.000	0.123	1.000	N	NA
4586401	4586402	YPE_0076	YPE_0077	malZ		FALSE	0.224	155.000	0.031	1.000		NA
4586405	4586406	YPE_0081	YPE_0082			TRUE	0.664	26.000	0.000	NA		NA
4586407	4586408	YPE_0083	YPE_0084	tnp	ahpC	FALSE	0.052	215.000	0.000	1.000	N	NA
4586408	4586409	YPE_0084	YPE_0085	ahpC	acpH	FALSE	0.045	299.000	0.014	1.000		NA
4586410	4586411	YPE_0086	YPE_0087	queA	tgt	TRUE	0.970	93.000	0.360	0.001	Y	NA
4586411	4586412	YPE_0087	YPE_0088	tgt		TRUE	0.701	112.000	0.325	NA	N	NA
4586412	4586413	YPE_0088	YPE_0089		secD	TRUE	0.933	28.000	0.045	NA	Y	NA
4586413	4586414	YPE_0089	YPE_0090	secD	secF	TRUE	0.994	11.000	0.206	0.001	Y	NA
4586414	4586415	YPE_0090	YPE_0091	secF	tnp	FALSE	0.057	207.000	0.000	1.000	N	NA
4586415	4586416	YPE_0091	YPE_0092	tnp		FALSE	0.054	298.000	0.000	NA		NA
4586416	4586417	YPE_0092	YPE_0093			TRUE	0.609	33.000	0.000	NA		NA
4586417	4586418	YPE_0093	YPE_0094			FALSE	0.353	71.000	0.000	NA		NA
4586418	4586419	YPE_0094	YPE_0095		ribD	TRUE	0.606	150.000	0.277	NA	N	NA
4586419	4586420	YPE_0095	YPE_0096	ribD	ribH	TRUE	0.818	136.000	0.034	0.002	Y	NA
4586420	4586421	YPE_0096	YPE_0097	ribH	nusB	TRUE	0.950	21.000	0.347	1.000	N	NA
4586421	4586422	YPE_0097	YPE_0098	nusB	thiL	FALSE	0.308	241.000	0.225	1.000	N	NA
4586422	4586423	YPE_0098	YPE_0099	thiL	pgpA	TRUE	0.976	-7.000	0.206	1.000	N	NA
4586423	4586424	YPE_0099	YPE_0100	pgpA	tnp	FALSE	0.053	214.000	0.000	1.000	N	NA
4586425	4586426	YPE_0101	YPE_0102	dxs	ispA	TRUE	0.710	156.000	0.060	1.000	Y	NA
4586426	4586427	YPE_0102	YPE_0103	ispA	xseB	TRUE	0.721	5.000	0.035	1.000	N	NA
4586428	4586429	YPE_0104	YPE_0105		thiI	FALSE	0.282	98.000	0.000	NA		NA
4586430	4586431	YPE_0106	YPE_0107	yajL	apbA	TRUE	0.969	-37.000	0.155	NA		NA
4586433	4586434	YPE_0109	YPE_0110		cyoE	FALSE	0.039	478.000	0.061	0.089	N	NA
4586434	4586435	YPE_0110	YPE_0111	cyoE	cyoD	TRUE	0.929	11.000	0.118	0.089	N	NA
4586435	4586436	YPE_0111	YPE_0112	cyoD	cyoC	TRUE	0.999	0.000	0.485	0.047	Y	NA
4586436	4586437	YPE_0112	YPE_0113	cyoC	cyoB	TRUE	0.999	-10.000	0.697	0.047	Y	NA
4586437	4586438	YPE_0113	YPE_0114	cyoB	cyoA	TRUE	0.996	5.000	0.204	0.007	Y	NA
4586438	4586439	YPE_0114	YPE_0115	cyoA		FALSE	0.035	370.000	0.000	NA		NA
4586439	4586440	YPE_0115	YPE_0116		ampG	FALSE	0.057	292.000	0.000	NA		NA
4586440	4586441	YPE_0116	YPE_0117	ampG		TRUE	0.625	118.000	0.256	NA	N	NA
4586442	4586443	YPE_0118	YPE_0119	bolA		FALSE	0.178	141.000	0.011	NA		NA
4586443	4586444	YPE_0119	YPE_0120		tig	FALSE	0.251	73.000	0.002	NA		NA
4586444	4586445	YPE_0120	YPE_0121	tig	clpP	TRUE	0.490	462.000	0.351	1.000	Y	NA
4586445	4586446	YPE_0121	YPE_0122	clpP	clpX	TRUE	0.916	206.000	0.352	0.003	Y	NA
4586446	4586447	YPE_0122	YPE_0123	clpX	lon	TRUE	0.797	195.000	0.201	1.000	Y	NA
4586447	4586448	YPE_0123	YPE_0124	lon	hupB	FALSE	0.012	218.000	0.005	NA	N	NA
4586448	4586449	YPE_0124	YPE_0125	hupB	ppiD	FALSE	0.026	301.000	0.046	NA	N	NA
4586449	4586450	YPE_0125	YPE_0126	ppiD		FALSE	0.106	140.000	0.000	1.000	N	NA
4586450	4586451	YPE_0126	YPE_0127			FALSE	0.041	354.000	0.000	1.000		NA
4586452	4586453	YPE_0128	YPE_0129	queC		FALSE	0.062	265.000	0.019	1.000		NA
4586456	4586457	YPE_0132	YPE_0133		mdlA	TRUE	0.536	102.000	0.179	1.000	N	NA
4586457	4586458	YPE_0133	YPE_0134	mdlA	mdlB	TRUE	1.000	-7.000	0.911	0.007	Y	NA
4586458	4586459	YPE_0134	YPE_0135	mdlB	glnK	FALSE	0.009	410.000	0.028	1.000	N	NA
4586459	4586460	YPE_0135	YPE_0136	glnK		TRUE	0.795	34.000	0.156	1.000	N	NA
4586465	4586466	YPE_0141	YPE_0142	hha		TRUE	0.650	49.000	0.080	NA		NA
4586466	4586467	YPE_0142	YPE_0143			TRUE	0.771	159.000	0.400	NA		NA
4586467	4586468	YPE_0143	YPE_0144		rpmJ2	FALSE	0.015	874.000	0.000	1.000		NA
4586468	4586469	YPE_0144	YPE_0145	rpmJ2		TRUE	0.926	16.000	0.083	0.015		NA
4586469	4586470	YPE_0145	YPE_0146		acrB	FALSE	0.033	186.000	0.008	1.000	N	NA
4586470	4586471	YPE_0146	YPE_0147	acrB	acrA	TRUE	0.973	17.000	0.500	1.000	N	NA
4586472	4586473	YPE_0148	YPE_0149	acrR		TRUE	0.778	13.000	0.075	NA	N	NA
4586473	4586474	YPE_0149	YPE_0150			FALSE	0.059	240.000	0.054	NA	N	NA
4586475	4586476	YPE_0151	YPE_0152		priC	TRUE	0.797	171.000	0.474	NA		NA
4586477	4586479	YPE_0153	YPE_0154		apt	FALSE	0.012	2305.000	0.000	NA		NA
4586479	4586480	YPE_0154	YPE_0155	apt	dnaX	FALSE	0.020	656.000	0.088	1.000	N	NA
4586480	4586481	YPE_0155	YPE_0156	dnaX		TRUE	0.916	56.000	0.411	NA		NA
4586481	4586482	YPE_0156	YPE_0157		recR	TRUE	0.996	0.000	0.604	NA		NA
4586482	4586483	YPE_0157	YPE_0158	recR	htpG	FALSE	0.059	192.000	0.028	1.000	N	NA
4586483	4586484	YPE_0158	YPE_0159	htpG	adk	FALSE	0.047	227.000	0.035	1.000	N	NA
4586484	4586485	YPE_0159	YPE_0160	adk	hemH	FALSE	0.065	90.000	0.008	1.000	N	NA
4586485	4586486	YPE_0160	YPE_0161	hemH	ddhD	FALSE	0.007	598.000	0.000	1.000	N	NA
4586486	4586487	YPE_0161	YPE_0162	ddhD	ddhA	TRUE	0.462	26.000	0.038	1.000	N	NA
4586487	4586488	YPE_0162	YPE_0163	ddhA	ddhC	FALSE	0.102	1097.000	0.051	1.000	Y	NA
4586488	4586489	YPE_0163	YPE_0164	ddhC	prt	TRUE	0.942	37.000	0.000	0.020	Y	NA
4586489	4586490	YPE_0164	YPE_0165	prt	wbyH	TRUE	0.783	1.000	0.000	NA	N	NA
4586490	4586491	YPE_0165	YPE_0166	wbyH	wzx	FALSE	0.335	74.000	0.000	NA		NA
4586491	4586492	YPE_0166	YPE_0168	wzx	wbyI	TRUE	0.811	11.000	0.000	NA		NA
4586492	4586494	YPE_0168	YPE_0169	wbyI	wbyJ	FALSE	0.199	172.000	0.000	NA		NA
4586494	4586495	YPE_0169	YPE_0171	wbyJ	wzy	TRUE	0.934	-3.000	0.000	NA		NA
4586495	4586497	YPE_0171	YPE_0172	wzy	wbyK	FALSE	0.083	249.000	0.000	NA		NA
4586497	4586498	YPE_0172	YPE_0174	wbyK	gmd	TRUE	0.752	16.000	0.000	NA		NA
4586498	4586500	YPE_0174	YPE_0176	gmd	fcl	TRUE	0.854	6.000	0.000	NA		NA
4586500	4586502	YPE_0176	YPE_0177	fcl	manC	FALSE	0.146	202.000	0.000	NA		NA
4586502	4586503	YPE_0177	YPE_0178	manC	wbyL	TRUE	0.988	3.000	0.073	NA	Y	NA
4586503	4586504	YPE_0178	YPE_0179	wbyL	manB	TRUE	0.769	5.000	0.049	NA	N	NA
4586504	4586505	YPE_0179	YPE_0180	manB	wzz	FALSE	0.285	48.000	0.000	1.000	N	NA
4586505	4586506	YPE_0180	YPE_0181	wzz	gsk	FALSE	0.060	204.000	0.000	1.000	N	NA
4586507	4586508	YPE_0182	YPE_0183	rosB	rosA	TRUE	0.544	235.000	0.000	0.088	Y	NA
4586511	4586512	YPE_0185	YPE_0186			FALSE	0.057	292.000	0.000	NA		NA
4586514	4586515	YPE_0188	YPE_0189		copA	FALSE	0.016	521.000	0.018	NA		NA
4586517	4586518	YPE_0191	YPE_0192			TRUE	0.997	3.000	0.313	NA	Y	NA
4586518	4586519	YPE_0192	YPE_0193			TRUE	0.644	195.000	0.075	NA	Y	NA
4586519	4586520	YPE_0193	YPE_0194			TRUE	0.582	77.000	0.118	1.000		NA
4586520	4586521	YPE_0194	YPE_0195		tesA	FALSE	0.056	387.000	0.072	1.000		NA
4586522	4586523	YPE_0196	YPE_0197			TRUE	0.999	-3.000	0.535	NA	Y	NA
4586524	4586525	YPE_0198	YPE_0199	purK	purE	TRUE	0.998	-3.000	0.136	0.001	Y	NA
4586525	4586526	YPE_0199	YPE_0200	purE	lpxH	FALSE	0.047	296.000	0.016	1.000		NA
4586526	4586527	YPE_0200	YPE_0201	lpxH	ppiB	TRUE	0.966	11.000	0.237	1.000		NA
4586528	4586529	YPE_0202	YPE_0203	cysS	tnp	FALSE	0.016	347.000	0.000	1.000	N	NA
4586529	4586530	YPE_0203	YPE_0204	tnp		TRUE	0.630	176.000	0.000	1.000	Y	NA
4586531	4586532	YPE_0205	YPE_0206			TRUE	0.728	107.000	0.259	1.000		NA
4586535	4586536	YPE_0209	YPE_0210			TRUE	0.882	4.000	0.000	NA		NA
4586537	4586538	YPE_0211	YPE_0212	bcp	gcvR	TRUE	0.946	0.000	0.102	1.000	N	NA
4586539	4586540	YPE_0213	YPE_0214	dapA	nlpB	TRUE	0.949	18.000	0.032	NA	Y	NA
4586540	4586541	YPE_0214	YPE_0215	nlpB	tnp	FALSE	0.073	175.000	0.000	NA	N	NA
4586541	4586542	YPE_0215	YPE_0216	tnp	purC	FALSE	0.102	148.000	0.000	1.000	N	NA
4586542	4586543	YPE_0216	YPE_0217	purC		FALSE	0.092	219.000	0.004	1.000		NA
4586543	4586544	YPE_0217	YPE_0218			FALSE	0.243	94.000	0.018	NA		NA
4586544	4586545	YPE_0218	YPE_0219			TRUE	0.960	2.000	0.100	NA		NA
4586546	4586547	YPE_0220	YPE_0221			TRUE	0.646	68.000	0.130	NA		NA
4586547	4586548	YPE_0221	YPE_0222		dapE	TRUE	0.986	-3.000	0.163	0.027	N	NA
4586548	4586549	YPE_0222	YPE_0223	dapE		TRUE	0.984	2.000	0.292	1.000	N	NA
4586549	4586550	YPE_0223	YPE_0224			FALSE	0.171	160.000	0.006	1.000		NA
4586551	4586552	YPE_0225	YPE_0226			TRUE	0.983	95.000	0.688	0.073	Y	NA
4586552	4586553	YPE_0226	YPE_0227			TRUE	0.996	-7.000	0.585	0.073	N	NA
4586553	4586554	YPE_0227	YPE_0228			FALSE	0.009	478.000	0.000	1.000	N	NA
4586554	4586555	YPE_0228	YPE_0229			TRUE	0.948	58.000	0.600	1.000		NA
4586556	4586557	YPE_0230	YPE_0231			FALSE	0.059	289.000	0.000	NA		NA
4586557	4586558	YPE_0231	YPE_0232			FALSE	0.103	231.000	0.000	NA		NA
4586561	4586562	YPE_0235	YPE_0236	napF	napD	TRUE	0.982	-10.000	0.209	1.000		NA
4586562	4586563	YPE_0236	YPE_0237	napD	napA	TRUE	0.999	-3.000	0.875	0.002	N	NA
4586563	4586564	YPE_0237	YPE_0238	napA	napB	TRUE	0.851	95.000	0.031	0.002	Y	NA
4586564	4586565	YPE_0238	YPE_0239	napB	napC	TRUE	0.992	25.000	0.490	1.000	Y	NA
4586565	4586566	YPE_0239	YPE_0240	napC		FALSE	0.168	184.000	0.070	1.000	N	NA
4586566	4586567	YPE_0240	YPE_0241		maeB	FALSE	0.280	196.000	0.047	0.006	N	NA
4586568	4586569	YPE_0242	YPE_0243		hemF	TRUE	0.903	0.000	0.016	NA		NA
4586573	4586574	YPE_0247	YPE_0248			FALSE	0.022	487.000	0.000	NA		NA
4586575	4586576	YPE_0249	YPE_0250			TRUE	0.697	178.000	0.333	NA		NA
4586577	4586578	YPE_0251	YPE_0252		nanE	TRUE	0.452	63.000	0.087	1.000	N	NA
4586578	4586579	YPE_0252	YPE_0253	nanE		FALSE	0.136	206.000	0.000	NA		NA
4586581	4586582	YPE_0254	YPE_0255			TRUE	0.862	97.000	0.154	NA	Y	NA
4586582	4586583	YPE_0255	YPE_0256			TRUE	0.552	40.000	0.000	NA		NA
4586583	4586584	YPE_0256	YPE_0257			TRUE	0.934	-3.000	0.000	NA		NA
4586584	4586585	YPE_0257	YPE_0258			FALSE	0.007	605.000	0.000	1.000	N	NA
4586585	4586586	YPE_0258	YPE_0259		cysP	FALSE	0.019	315.000	0.000	1.000	N	NA
4586586	4586587	YPE_0259	YPE_0260	cysP	cysU	TRUE	0.996	0.000	0.479	0.002	N	NA
4586587	4586588	YPE_0260	YPE_0261	cysU	cysW	TRUE	0.997	0.000	0.583	0.001	N	NA
4586588	4586589	YPE_0261	YPE_0262	cysW	cysA	TRUE	0.995	-10.000	0.180	1.000	Y	NA
4586589	4586590	YPE_0262	YPE_0263	cysA	cysM	FALSE	0.127	171.000	0.049	1.000	N	NA
4586590	4586591	YPE_0263	YPE_0264	cysM		FALSE	0.088	245.000	0.000	NA		NA
4586592	4586593	YPE_0265	YPE_0266			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4586593	4586594	YPE_0266	YPE_0267			FALSE	0.101	233.000	0.000	NA		NA
4586595	4586596	YPE_0268	YPE_0269			TRUE	0.601	34.000	0.000	NA		NA
4586596	4586598	YPE_0269	YPE_0270			FALSE	0.229	143.000	0.000	NA		NA
4586598	4586599	YPE_0270	YPE_0271			TRUE	0.993	-3.000	0.357	NA		NA
4586599	4586600	YPE_0271	YPE_0272			TRUE	0.452	60.000	0.000	1.000		NA
4586601	4586602	YPE_0273	YPE_0274			TRUE	0.987	4.000	0.439	1.000	N	NA
4586603	4586604	YPE_0275	YPE_0276			TRUE	0.978	26.000	0.216	1.000	Y	NA
4586604	4586605	YPE_0276	YPE_0277		tnp	FALSE	0.027	270.000	0.000	1.000	N	NA
4586606	4586607	YPE_0278	YPE_0279	crr	ptsI	TRUE	0.930	49.000	0.038	0.008	Y	NA
4586607	4586608	YPE_0279	YPE_0280	ptsI	ptsH	TRUE	0.928	49.000	0.033	0.008	Y	NA
4586608	4586609	YPE_0280	YPE_0281	ptsH	cysK	FALSE	0.005	499.000	0.019	1.000	N	NA
4586609	4586610	YPE_0281	YPE_0282	cysK		TRUE	0.786	157.000	0.122	1.000	Y	NA
4586611	4586612	YPE_0283	YPE_0284	zipA	ligA	FALSE	0.074	91.000	0.013	1.000	N	NA
4586612	4586613	YPE_0284	YPE_0285	ligA		TRUE	0.664	20.000	0.017	NA		NA
4586614	4586615	YPE_0286	YPE_0287			FALSE	0.221	132.000	0.027	NA		NA
4586615	4586616	YPE_0287	YPE_0288			FALSE	0.160	195.000	0.000	NA		NA
4586616	4586617	YPE_0288	YPE_0289			FALSE	0.324	78.000	0.000	NA		NA
4586617	4586618	YPE_0289	YPE_0290		tnp	FALSE	0.058	291.000	0.000	NA		NA
4586618	4586619	YPE_0290	YPE_0291	tnp	gltX	FALSE	0.071	193.000	0.000	1.000	N	NA
4586620	4586621	YPE_0292	YPE_0293			TRUE	0.576	37.000	0.000	NA		NA
4586621	4586622	YPE_0293	YPE_0294			TRUE	0.520	45.000	0.000	NA		NA
4586622	4586623	YPE_0294	YPE_0295			FALSE	0.151	200.000	0.000	NA		NA
4586626	4586627	YPE_0298	YPE_0299			FALSE	0.301	171.000	0.071	NA		NA
4586627	4586628	YPE_0299	YPE_0300			FALSE	0.157	136.000	0.050	1.000	N	NA
4586629	4586630	YPE_0301	YPE_0302		glk	FALSE	0.216	181.000	0.048	NA		NA
4586632	4586633	YPE_0304	YPE_0305			FALSE	0.016	245.000	0.009	1.000	N	NA
4586635	4586636	YPE_0307	YPE_0308			TRUE	0.978	27.000	0.625	NA		NA
4586636	4586637	YPE_0308	YPE_0309			TRUE	0.998	-3.000	0.740	NA		NA
4586638	4586639	YPE_0310	YPE_0311			TRUE	0.996	-3.000	0.333	0.046		NA
4586639	4586640	YPE_0311	YPE_0312			FALSE	0.031	413.000	0.000	1.000		NA
4586640	4586641	YPE_0312	YPE_0313			TRUE	0.996	2.000	0.667	1.000		NA
4586641	4586642	YPE_0313	YPE_0314			TRUE	0.997	12.000	0.500	0.046	Y	NA
4586646	4586647	YPE_0318	YPE_0319	yfuC	yfuB	TRUE	0.992	-3.000	0.275	0.072	N	NA
4586647	4586648	YPE_0319	YPE_0320	yfuB	yfuA	TRUE	0.994	56.000	0.824	0.072	Y	NA
4586649	4586650	YPE_0321	YPE_0322	mltB		FALSE	0.004	1262.000	0.000	NA	N	NA
4586651	4586652	YPE_0323	YPE_0324			TRUE	0.999	-3.000	1.000	NA		NA
4586652	4586653	YPE_0324	YPE_0325			TRUE	0.993	1.000	0.400	NA		NA
4586653	4586654	YPE_0325	YPE_0326			TRUE	0.997	-3.000	0.600	NA		NA
4586654	4586655	YPE_0326	YPE_0327			TRUE	0.974	40.000	0.714	NA		NA
4586655	4586656	YPE_0327	YPE_0328			TRUE	0.994	7.000	0.714	NA		NA
4586656	4586657	YPE_0328	YPE_0329			TRUE	0.953	99.000	1.000	NA		NA
4586657	4586658	YPE_0329	YPE_0330			TRUE	0.998	0.000	0.833	NA		NA
4586659	4586660	YPE_0331	YPE_0332			TRUE	0.874	201.000	1.000	1.000	N	NA
4586660	4586661	YPE_0332	YPE_0333			TRUE	0.982	139.000	1.000	1.000	Y	NA
4586661	4586662	YPE_0333	YPE_0335			FALSE	0.246	128.000	0.000	NA		NA
4586665	4586666	YPE_0338	YPE_0339			TRUE	0.906	105.000	0.667	NA		NA
4586666	4586667	YPE_0339	YPE_0340			TRUE	0.988	24.000	0.800	NA		NA
4586667	4586668	YPE_0340	YPE_0341			TRUE	0.446	326.000	0.500	NA		NA
4586668	4586669	YPE_0341	YPE_0342			TRUE	0.459	253.000	0.333	NA		NA
4586669	4586670	YPE_0342	YPE_0343			TRUE	0.997	4.000	0.833	NA		NA
4586670	4586671	YPE_0343	YPE_0344			TRUE	0.934	-3.000	0.000	NA		NA
4586671	4586673	YPE_0344	YPE_0345			FALSE	0.304	87.000	0.000	NA		NA
4586673	4586674	YPE_0345	YPE_0346			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4586674	4586675	YPE_0346	YPE_0347			FALSE	0.015	861.000	0.000	NA		NA
4586675	4586676	YPE_0347	YPE_0348			FALSE	0.012	3436.000	0.000	NA		NA
4586676	4586677	YPE_0348	YPE_0349			TRUE	0.990	20.000	0.833	NA		NA
4586677	4586678	YPE_0349	YPE_0350			TRUE	0.954	97.000	1.000	NA		NA
4586678	4586679	YPE_0350	YPE_0351			TRUE	0.676	25.000	0.000	NA		NA
4586680	4586681	YPE_0352	YPE_0353			FALSE	0.034	376.000	0.000	NA		NA
4586681	4586682	YPE_0353	YPE_0354		lemA	TRUE	0.920	5.000	0.074	NA		NA
4586683	4586684	YPE_0355	YPE_0356			FALSE	0.077	255.000	0.000	NA		NA
4586684	4586685	YPE_0356	YPE_0357		ccmA	FALSE	0.025	445.000	0.000	NA		NA
4586685	4586686	YPE_0357	YPE_0358	ccmA	ccmB	TRUE	0.999	-30.000	0.503	0.002	Y	NA
4586686	4586687	YPE_0358	YPE_0359	ccmB	ccmC	TRUE	0.988	63.000	0.501	0.001	Y	NA
4586687	4586688	YPE_0359	YPE_0360	ccmC	ccmD	TRUE	0.995	-3.000	0.501	1.000	N	NA
4586688	4586689	YPE_0360	YPE_0361	ccmD	ccmE	TRUE	0.991	-3.000	0.344	1.000	N	NA
4586689	4586690	YPE_0361	YPE_0362	ccmE	ccmF	TRUE	0.998	-3.000	0.211	0.002	Y	NA
4586690	4586691	YPE_0362	YPE_0363	ccmF	ccmG	TRUE	1.000	-3.000	0.804	0.002	Y	NA
4586691	4586692	YPE_0363	YPE_0364	ccmG	ccmH	TRUE	0.999	-3.000	0.578	NA	Y	NA
4586692	4586693	YPE_0364	YPE_0365	ccmH		TRUE	0.999	0.000	0.727	NA	Y	NA
4586693	4586694	YPE_0365	YPE_0366		vacJ	TRUE	0.864	36.000	0.239	NA	N	NA
4586696	4586697	YPE_0368	YPE_0369			FALSE	0.093	287.000	0.061	1.000		NA
4586697	4586698	YPE_0369	YPE_0370		fadJ	TRUE	0.998	0.000	0.430	1.000	Y	NA
4586698	4586699	YPE_0370	YPE_0371	fadJ	sixA	FALSE	0.007	569.000	0.000	1.000	N	NA
4586701	4586702	YPE_0373	YPE_0374	prmB	aroC	FALSE	0.345	77.000	0.081	1.000	N	NA
4586702	4586703	YPE_0374	YPE_0375	aroC	mepA	TRUE	0.629	6.000	0.025	1.000	N	NA
4586703	4586704	YPE_0375	YPE_0376	mepA		TRUE	0.968	4.000	0.160	1.000		NA
4586704	4586705	YPE_0376	YPE_0377			TRUE	0.587	100.000	0.153	NA		NA
4586705	4586706	YPE_0377	YPE_0378			TRUE	0.915	58.000	0.425	NA		NA
4586711	4586712	YPE_0383	YPE_0384	flk		FALSE	0.148	285.000	0.118	NA		NA
4586713	4586714	YPE_0385	YPE_0386		pdxB	FALSE	0.346	47.000	0.043	1.000	N	NA
4586716	4586717	YPE_0388	YPE_0389	usg	truA	FALSE	0.169	87.000	0.040	1.000	N	NA
4586717	4586718	YPE_0389	YPE_0390	truA	dedA	FALSE	0.228	157.000	0.038	NA		NA
4586718	4586719	YPE_0390	YPE_0391	dedA	accD	FALSE	0.085	231.000	0.020	NA		NA
4586719	4586720	YPE_0391	YPE_0392	accD	folC	TRUE	0.440	249.000	0.383	1.000	N	NA
4586720	4586721	YPE_0392	YPE_0393	folC	dedD	TRUE	0.664	120.000	0.216	1.000		NA
4586721	4586722	YPE_0393	YPE_0394	dedD	cvpA	FALSE	0.126	312.000	0.116	1.000		NA
4586722	4586723	YPE_0394	YPE_0395	cvpA	purF	TRUE	0.965	13.000	0.262	1.000		NA
4586723	4586724	YPE_0395	YPE_0396	purF	ubiX	FALSE	0.061	247.000	0.056	1.000	N	NA
4586724	4586725	YPE_0396	YPE_0397	ubiX	hisJ	FALSE	0.008	519.000	0.000	1.000	N	NA
4586725	4586726	YPE_0397	YPE_0398	hisJ	hisQ	TRUE	0.986	103.000	0.833	0.071	Y	NA
4586726	4586727	YPE_0398	YPE_0399	hisQ	hisM	TRUE	1.000	-3.000	0.900	0.020	Y	NA
4586727	4586728	YPE_0399	YPE_0400	hisM	hisP	TRUE	0.997	14.000	0.643	1.000	Y	NA
4586730	4586731	YPE_0402	YPE_0403			FALSE	0.149	201.000	0.000	NA		NA
4586731	4586732	YPE_0403	YPE_0404			TRUE	0.473	222.000	0.143	0.011		NA
4586734	4586735	YPE_0406	YPE_0691C		pbpC	TRUE	0.526	44.000	0.000	NA		NA
4586738	4586739	YPE_0409	YPE_0410			FALSE	0.068	268.000	0.000	NA		NA
4586739	4586740	YPE_0410	YPE_0411			FALSE	0.078	254.000	0.000	NA		NA
4586741	4586742	YPE_0412	YPE_0413			TRUE	0.688	24.000	0.000	NA		NA
4586742	4586743	YPE_0413	YPE_0414			TRUE	0.560	39.000	0.000	NA		NA
4586744	4586745	YPE_0415	YPE_0416	yapC		FALSE	0.020	535.000	0.000	NA		NA
4586747	4586748	YPE_0418	YPE_0419			TRUE	0.949	-7.000	0.068	NA		NA
4586748	4586749	YPE_0419	YPE_0420		bglB	FALSE	0.216	159.000	0.000	NA		NA
4586751	4586752	YPE_0422	YPE_0423			TRUE	0.966	26.000	0.438	1.000		NA
4586754	4586755	YPE_0425	YPE_0426			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4586756	4586757	YPE_0427	YPE_0428			FALSE	0.285	97.000	0.000	NA		NA
4586757	4586758	YPE_0428	YPE_0429			TRUE	0.861	12.000	0.063	NA		NA
4586758	4586759	YPE_0429	YPE_0430			TRUE	0.997	-7.000	0.285	1.000	Y	NA
4586759	4586760	YPE_0430	YPE_0431			TRUE	0.992	-3.000	0.054	1.000	Y	NA
4586760	4586761	YPE_0431	YPE_0432			TRUE	0.969	10.000	0.238	1.000		NA
4586761	4586762	YPE_0432	YPE_0433			TRUE	0.991	-7.000	0.179	0.003		NA
4586762	4586763	YPE_0433	YPE_0434			FALSE	0.109	227.000	0.000	NA		NA
4586764	4586766	YPE_0435	YPE_0436			FALSE	0.312	83.000	0.000	NA		NA
4586766	4586767	YPE_0436	YPE_0437			FALSE	0.060	286.000	0.000	NA		NA
4586767	4586768	YPE_0437	YPE_0438			FALSE	0.259	114.000	0.000	NA		NA
4586768	4586769	YPE_0438	YPE_0439			FALSE	0.074	259.000	0.000	NA		NA
4586771	4586772	YPE_0441	YPE_0442	folD		TRUE	0.827	15.000	0.055	1.000		NA
4586773	4586774	YPE_0443	YPE_0444	tnp	upp	FALSE	0.085	176.000	0.000	1.000	N	NA
4586775	4586776	YPE_0445	YPE_0446	purM	purN	TRUE	0.941	115.000	0.230	0.002	Y	NA
4586776	4586777	YPE_0446	YPE_0447	purN	speG	FALSE	0.025	229.000	0.017	1.000	N	NA
4586778	4586780	YPE_0448	YPE_0449	fliB	pstB1	FALSE	0.107	228.000	0.000	NA		NA
4586780	4586781	YPE_0449	YPE_0450	pstB1	pstA	TRUE	0.995	28.000	0.511	0.002	Y	NA
4586781	4586782	YPE_0450	YPE_0451	pstA	pstC	TRUE	0.995	0.000	0.489	1.000		NA
4586783	4586784	YPE_0452	YPE_0453	ppk	ppx	TRUE	0.996	11.000	0.486	1.000	Y	NA
4586784	4586785	YPE_0453	YPE_0454	ppx		FALSE	0.299	112.000	0.047	NA		NA
4586785	4586786	YPE_0454	YPE_0455		mgtE	TRUE	0.444	52.000	0.024	NA		NA
4586786	4586787	YPE_0455	YPE_0456	mgtE		FALSE	0.091	140.000	0.000	NA	N	NA
4586788	4586789	YPE_0457	YPE_0458			TRUE	0.911	62.000	0.072	0.071	Y	NA
4586789	4586790	YPE_0458	YPE_0459			TRUE	0.920	47.000	0.000	0.071	Y	NA
4586790	4586791	YPE_0459	YPE_0460		goaG	TRUE	0.868	53.000	0.000	1.000	Y	NA
4586792	4586793	YPE_0461	YPE_0462			FALSE	0.193	383.000	0.000	1.000	Y	NA
4586793	4586794	YPE_0462	YPE_0463			FALSE	0.015	364.000	0.000	1.000	N	NA
4586794	4586795	YPE_0463	YPE_0464			TRUE	0.998	0.000	1.000	1.000	N	NA
4586795	4586796	YPE_0464	YPE_0465			TRUE	0.997	-3.000	0.094	0.001	Y	NA
4586796	4586797	YPE_0465	YPE_0466		yegB	TRUE	0.956	34.000	0.438	1.000		NA
4586797	4586798	YPE_0466	YPE_0467	yegB	baeR	FALSE	0.014	1425.000	0.000	1.000		NA
4586798	4586799	YPE_0467	YPE_0468	baeR		FALSE	0.319	137.000	0.062	NA		NA
4586799	4586800	YPE_0468	YPE_0469			FALSE	0.046	275.000	0.008	NA		NA
4586800	4586801	YPE_0469	YPE_0470		ryeE	FALSE	0.275	101.000	0.000	NA		NA
4586801	4586802	YPE_0470	YPE_0471	ryeE		FALSE	0.025	450.000	0.000	NA		NA
4586808	4586809	YPE_0477	YPE_0478			TRUE	0.934	-3.000	0.000	NA		NA
4586809	4586810	YPE_0478	YPE_0479			FALSE	0.403	64.000	0.000	NA		NA
4586810	4586811	YPE_0479	YPE_0480			TRUE	0.568	38.000	0.000	NA		NA
4586811	4586812	YPE_0480	YPE_0481			FALSE	0.403	64.000	0.000	NA		NA
4586812	4586813	YPE_0481	YPE_0482			TRUE	0.688	24.000	0.000	NA		NA
4586814	4586815	YPE_0483	YPE_0484	tnp	guaA	FALSE	0.014	375.000	0.000	1.000	N	NA
4586815	4586816	YPE_0484	YPE_0485	guaA	guaB	TRUE	0.899	180.000	0.190	0.001	Y	NA
4586818	4586819	YPE_0487	YPE_0488			TRUE	0.578	49.000	0.055	NA		NA
4586819	4586820	YPE_0488	YPE_0489			FALSE	0.067	347.000	0.003	0.085		NA
4586820	4586821	YPE_0489	YPE_0490			TRUE	0.608	148.000	0.203	1.000		NA
4586821	4586822	YPE_0490	YPE_0491			TRUE	0.985	12.000	0.492	1.000		NA
4586822	4586823	YPE_0491	YPE_0492		hisS	TRUE	0.962	14.000	0.259	1.000		NA
4586823	4586824	YPE_0492	YPE_0493	hisS	ispG	FALSE	0.358	209.000	0.207	1.000	N	NA
4586824	4586825	YPE_0493	YPE_0494	ispG		TRUE	0.823	62.000	0.233	1.000		NA
4586825	4586826	YPE_0494	YPE_0495			TRUE	0.974	-10.000	0.153	1.000		NA
4586826	4586827	YPE_0495	YPE_0496			FALSE	0.327	154.000	0.067	1.000		NA
4586827	4586828	YPE_0496	YPE_0497		ndk	FALSE	0.236	262.000	0.156	1.000		NA
4586828	4586829	YPE_0497	YPE_0498	ndk		FALSE	0.045	327.000	0.000	NA		NA
4586830	4586831	YPE_0499	YPE_0500		yapA	FALSE	0.038	354.000	0.000	NA		NA
4586832	4586833	YPE_0501	YPE_0502		pepB	TRUE	0.767	79.000	0.253	NA		NA
4586833	4586834	YPE_0502	YPE_0503	pepB		TRUE	0.571	140.000	0.171	1.000		NA
4586834	4586835	YPE_0503	YPE_0504		fdx	TRUE	0.976	30.000	0.625	1.000		NA
4586835	4586836	YPE_0504	YPE_0505	fdx	hscA	TRUE	0.996	3.000	0.794	1.000	N	NA
4586836	4586837	YPE_0505	YPE_0506	hscA	hscB	TRUE	0.893	243.000	0.634	1.000	Y	NA
4586837	4586838	YPE_0506	YPE_0507	hscB	iscA	TRUE	0.861	111.000	0.500	1.000		NA
4586838	4586839	YPE_0507	YPE_0508	iscA	iscU	TRUE	0.611	270.000	0.359	0.002		NA
4586839	4586840	YPE_0508	YPE_0509	iscU	iscS	TRUE	0.947	31.000	0.448	1.000	N	NA
4586840	4586841	YPE_0509	YPE_0510	iscS	iscR	TRUE	0.899	54.000	0.424	1.000	N	NA
4586841	4586842	YPE_0510	YPE_0511	iscR		FALSE	0.351	156.000	0.126	1.000	N	NA
4586843	4586844	YPE_0512	YPE_0513		tnp	FALSE	0.060	204.000	0.000	1.000	N	NA
4586845	4586846	YPE_0514	YPE_0515			TRUE	0.974	-9.000	0.150	NA		NA
4586848	4586849	YPE_0517	YPE_0518	hcaT	ail2	FALSE	0.042	352.000	0.000	1.000		NA
4586849	4586850	YPE_0518	YPE_0519	ail2		FALSE	0.262	110.000	0.000	NA		NA
4586850	4586851	YPE_0519	YPE_0520		glyA	FALSE	0.259	113.000	0.000	NA		NA
4586853	4586854	YPE_0522	YPE_0523	glnB	nadE	TRUE	0.889	15.000	0.151	1.000	N	NA
4586854	4586855	YPE_0523	YPE_0524	nadE		FALSE	0.186	160.000	0.065	1.000	N	NA
4586855	4586856	YPE_0524	YPE_0525			TRUE	0.963	-37.000	0.130	NA		NA
4586856	4586857	YPE_0525	YPE_0526			TRUE	0.611	76.000	0.132	NA		NA
4586857	4586858	YPE_0526	YPE_0527		tnp	FALSE	0.058	206.000	0.000	1.000	N	NA
4586859	4586860	YPE_0528	YPE_0529	sroF		FALSE	0.018	580.000	0.000	NA		NA
4586860	4586861	YPE_0529	YPE_0530			FALSE	0.046	323.000	0.000	NA		NA
4586864	4586865	YPE_0533	YPE_0534	yfhC		FALSE	0.203	110.000	0.062	NA	N	NA
4586865	4586866	YPE_0534	YPE_0535			FALSE	0.386	275.000	0.316	NA		NA
4586867	4586868	YPE_0536	YPE_0537		yfhL	FALSE	0.287	162.000	0.056	1.000		NA
4586869	4586870	YPE_0538	YPE_0539	tnp	acpS	FALSE	0.063	202.000	0.000	1.000	N	NA
4586870	4586871	YPE_0539	YPE_0540	acpS	pdxJ	TRUE	0.988	0.000	0.326	1.000	N	NA
4586871	4586872	YPE_0540	YPE_0541	pdxJ		FALSE	0.073	190.000	0.000	1.000	N	NA
4586872	4586873	YPE_0541	YPE_0542			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4586873	4586874	YPE_0542	YPE_0543		recO	TRUE	0.796	127.000	0.000	0.024	Y	NA
4586874	4586875	YPE_0543	YPE_0544	recO	era	TRUE	0.925	10.000	0.109	1.000		NA
4586875	4586876	YPE_0544	YPE_0545	era	rnc	TRUE	0.987	-3.000	0.127	0.057		NA
4586876	4586877	YPE_0545	YPE_0546	rnc	lepB	FALSE	0.103	352.000	0.117	1.000		NA
4586877	4586878	YPE_0546	YPE_0547	lepB	lepA	TRUE	0.958	10.000	0.187	1.000		NA
4586880	4586881	YPE_0549	YPE_0550	rseC	rseB	TRUE	0.999	-3.000	0.609	NA	Y	NA
4586881	4586882	YPE_0550	YPE_0551	rseB	rseA	TRUE	0.999	0.000	0.856	NA	Y	NA
4586882	4586883	YPE_0551	YPE_0552	rseA	rpoE	TRUE	0.977	26.000	0.705	NA	N	NA
4586887	4586888	YPE_0556	YPE_0557	yplB	yplA	TRUE	0.845	78.000	0.375	NA		NA
4586888	4586889	YPE_0557	YPE_0558	yplA		FALSE	0.200	179.000	0.000	1.000		NA
4586891	4586892	YPE_0560	YPE_0561			TRUE	0.975	10.000	0.300	NA		NA
4586892	4586893	YPE_0561	YPE_0562			TRUE	0.998	-3.000	0.939	NA		NA
4586893	4586894	YPE_0562	YPE_0563			TRUE	0.655	85.000	0.173	NA		NA
4586894	4586895	YPE_0563	YPE_0564			TRUE	0.988	-3.000	0.211	1.000		NA
4586895	4586896	YPE_0564	YPE_4350		ybgJ	TRUE	0.924	-6.000	0.000	NA		NA
4586896	4586898	YPE_4350	YPE_0565	ybgJ		FALSE	0.017	619.000	0.000	NA		NA
4586898	4586899	YPE_0565	YPE_0566			FALSE	0.216	123.000	0.013	1.000		NA
4586899	4586900	YPE_0566	YPE_0567		phrB	TRUE	0.690	-3.000	0.008	1.000	N	NA
4586900	4586901	YPE_0567	YPE_0568	phrB		FALSE	0.205	130.000	0.019	NA		NA
4586901	4586902	YPE_0568	YPE_0569			FALSE	0.215	339.000	0.231	NA		NA
4586903	4586904	YPE_0570	YPE_0571	kdpA	kdpB	TRUE	0.943	94.000	0.201	0.001	Y	NA
4586904	4586905	YPE_0571	YPE_0572	kdpB	kdpC	TRUE	0.976	212.000	0.877	0.001	Y	NA
4586905	4586906	YPE_0572	YPE_0573	kdpC	kdpD	TRUE	0.868	10.000	0.100	1.000	N	NA
4586906	4586907	YPE_0573	YPE_0574	kdpD	kdpE	TRUE	0.720	293.000	0.385	1.000	Y	NA
4586907	4586908	YPE_0574	YPE_0575	kdpE		TRUE	0.558	95.000	0.129	NA		NA
4586909	4586910	YPE_0576	YPE_0577			TRUE	0.533	43.000	0.000	NA		NA
4586910	4586911	YPE_0577	YPE_0578		pgm	FALSE	0.121	218.000	0.000	NA		NA
4586911	4586912	YPE_0578	YPE_0579	pgm	seqA	TRUE	0.802	31.000	0.151	1.000	N	NA
4586913	4586914	YPE_0580	YPE_0581			FALSE	0.260	112.000	0.000	NA		NA
4586915	4586916	YPE_0582	YPE_0583		celD	TRUE	0.850	52.000	0.222	1.000		NA
4586916	4586917	YPE_0583	YPE_0584	celD	celC	TRUE	0.970	37.000	0.727	1.000	N	NA
4586917	4586918	YPE_0584	YPE_0585	celC	celB	TRUE	0.983	167.000	0.833	0.008	Y	NA
4586918	4586919	YPE_0585	YPE_0586	celB	celA	TRUE	0.995	11.000	0.250	0.008	Y	NA
4586920	4586921	YPE_0587	YPE_0588			TRUE	0.986	16.000	0.233	NA	Y	NA
4586924	4586925	YPE_0591	YPE_0592			TRUE	0.425	149.000	0.095	0.085	N	NA
4586925	4586926	YPE_0592	YPE_0593		ureG	FALSE	0.005	1155.000	0.000	1.000	N	NA
4586926	4586927	YPE_0593	YPE_0594	ureG	ureF	TRUE	0.854	127.000	0.064	0.002	Y	NA
4586927	4586928	YPE_0594	YPE_0595	ureF	ureE	TRUE	0.996	22.000	0.460	0.002	Y	NA
4586928	4586929	YPE_0595	YPE_0596	ureE	ureC	FALSE	0.158	296.000	0.067	0.001	N	NA
4586929	4586930	YPE_0596	YPE_0597	ureC	ureB	TRUE	0.959	90.000	0.267	0.001	Y	NA
4586930	4586931	YPE_0597	YPE_0598	ureB	ureA	TRUE	0.980	53.000	0.267	0.001	Y	NA
4586931	4586932	YPE_0598	YPE_0599	ureA		FALSE	0.089	1199.000	0.000	1.000	Y	NA
4586932	4586933	YPE_0599	YPE_0600			TRUE	0.997	-7.000	0.500	0.023		NA
4586933	4586934	YPE_0600	YPE_0601			TRUE	0.998	0.000	1.000	1.000		NA
4586934	4586935	YPE_0601	YPE_0602			TRUE	1.000	-3.000	1.000	0.070	Y	NA
4586935	4586936	YPE_0602	YPE_0603			TRUE	1.000	-3.000	1.000	0.070	Y	NA
4586936	4586937	YPE_0603	YPE_0604		cspG	FALSE	0.006	884.000	0.000	1.000	N	NA
4586942	4586943	YPE_0609	YPE_0610			FALSE	0.023	478.000	0.000	NA		NA
4586944	4586945	YPE_0611	YPE_0612	nrdH	nrdI	TRUE	0.972	14.000	0.440	NA	N	NA
4586945	4586946	YPE_0612	YPE_0613	nrdI	nrdE	TRUE	0.953	51.000	0.216	NA	Y	NA
4586946	4586947	YPE_0613	YPE_0614	nrdE	nrdF	TRUE	0.932	107.000	0.190	0.002	Y	NA
4586947	4586948	YPE_0614	YPE_0615	nrdF	proV	FALSE	0.006	676.000	0.000	1.000	N	NA
4586948	4586949	YPE_0615	YPE_0616	proV	proW	TRUE	0.999	-7.000	0.630	1.000	Y	NA
4586949	4586950	YPE_0616	YPE_0617	proW	proX	TRUE	0.993	48.000	0.695	0.070	Y	NA
4586953	4586954	YPE_0620	YPE_0621			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4586954	4586955	YPE_0621	YPE_0622		trp1400A	FALSE	0.021	547.000	0.000	1.000		NA
4586955	4586956	YPE_0622	YPE_0623	trp1400A		FALSE	0.312	83.000	0.000	NA		NA
4586956	4586958	YPE_0623	YPE_0624			FALSE	0.014	1125.000	0.000	NA		NA
4586958	4586959	YPE_0624	YPE_0625		ybfE	FALSE	0.265	332.000	0.276	1.000		NA
4586959	4586960	YPE_0625	YPE_0626	ybfE	fldA	FALSE	0.317	417.000	0.473	1.000		NA
4586960	4586961	YPE_0626	YPE_0627	fldA	fur	FALSE	0.087	367.000	0.156	1.000	N	NA
4586962	4586963	YPE_0628	YPE_0629		glnS	FALSE	0.017	706.000	0.000	1.000		NA
4586963	4586964	YPE_0629	YPE_0630	glnS	tnp	FALSE	0.063	202.000	0.000	1.000	N	NA
4586964	4586965	YPE_0630	YPE_0631	tnp	nagE	FALSE	0.029	265.000	0.000	1.000	N	NA
4586966	4586967	YPE_0632	YPE_0633	nagB	nagA	TRUE	0.997	20.000	0.557	0.001	Y	NA
4586967	4586968	YPE_0633	YPE_0634	nagA	nagC	TRUE	0.995	17.000	0.571	1.000	Y	NA
4586968	4586969	YPE_0634	YPE_0635	nagC	nagD	TRUE	0.829	73.000	0.070	1.000	Y	NA
4586969	4586970	YPE_0635	YPE_0636	nagD	asnB	FALSE	0.015	355.000	0.000	1.000	N	NA
4586972	4586973	YPE_0638	YPE_0639			TRUE	0.837	8.000	0.000	NA		NA
4586973	4586974	YPE_0639	YPE_0640			TRUE	0.633	30.000	0.000	NA		NA
4586974	4586975	YPE_0640	YPE_0641			TRUE	0.609	33.000	0.000	NA		NA
4586975	4586976	YPE_0641	YPE_0642			TRUE	0.854	6.000	0.000	NA		NA
4586978	4586979	YPE_0644	YPE_0645	miaB		FALSE	0.160	327.000	0.220	1.000	N	NA
4586979	4586980	YPE_0645	YPE_0646			TRUE	0.995	-3.000	0.457	NA		NA
4586980	4586981	YPE_0646	YPE_0647			TRUE	0.553	118.000	0.150	NA		NA
4586981	4586982	YPE_0647	YPE_0648		lnt	TRUE	0.987	8.000	0.557	1.000	N	NA
4586982	4586983	YPE_0648	YPE_0649	lnt	gltI	FALSE	0.006	765.000	0.000	1.000	N	NA
4586983	4586984	YPE_0649	YPE_0650	gltI	gltJ	TRUE	0.851	174.000	0.150	0.069	Y	NA
4586984	4586985	YPE_0650	YPE_0651	gltJ	gltK	TRUE	1.000	0.000	0.933	0.019	Y	NA
4586985	4586986	YPE_0651	YPE_0652	gltK	gltL	TRUE	0.998	-3.000	0.379	1.000	Y	NA
4586988	4586989	YPE_0654	YPE_0655	leuS	rlpB	TRUE	0.907	15.000	0.182	NA	N	NA
4586989	4586990	YPE_0655	YPE_0656	rlpB	holA	TRUE	0.979	-3.000	0.199	NA	N	NA
4586990	4586991	YPE_0656	YPE_0657	holA	nadD	TRUE	0.838	-10.000	0.045	1.000	N	NA
4586991	4586992	YPE_0657	YPE_0658	nadD		FALSE	0.107	224.000	0.032	NA		NA
4586992	4586993	YPE_0658	YPE_0659			TRUE	0.985	4.000	0.307	NA		NA
4586993	4586994	YPE_0659	YPE_0660		mrdA	FALSE	0.302	82.000	0.031	NA		NA
4586994	4586995	YPE_0660	YPE_0661	mrdA	mrdB	FALSE	0.105	185.000	0.046	1.000	N	NA
4586995	4586996	YPE_0661	YPE_0662	mrdB	rlpA	TRUE	0.613	10.000	0.035	NA	N	NA
4586996	4586997	YPE_0662	YPE_0663	rlpA	dacA	TRUE	0.623	403.000	0.475	NA	Y	NA
4586997	4586998	YPE_0663	YPE_0664	dacA		FALSE	0.257	198.000	0.081	NA		NA
4586998	4586999	YPE_0664	YPE_0665		lipB	TRUE	0.455	212.000	0.219	NA		NA
4586999	4587000	YPE_0665	YPE_0666	lipB	lipA	TRUE	0.929	193.000	0.319	0.001	Y	NA
4587006	4587007	YPE_0672	YPE_0673			FALSE	0.183	182.000	0.000	NA		NA
4587010	4587011	YPE_0676	YPE_0677			FALSE	0.009	465.000	0.000	1.000	N	NA
4587011	4587012	YPE_0677	YPE_0678			TRUE	0.990	10.000	0.199	1.000	Y	NA
4587012	4587013	YPE_0678	YPE_0679			TRUE	0.749	153.000	0.086	1.000	Y	NA
4587013	4587014	YPE_0679	YPE_0680			TRUE	0.726	32.000	0.064	1.000		NA
4587014	4587015	YPE_0680	YPE_0681			TRUE	0.910	24.000	0.176	1.000		NA
4587015	4587016	YPE_0681	YPE_0682			TRUE	0.997	12.000	0.444	0.015	Y	NA
4587016	4587017	YPE_0682	YPE_0683			TRUE	0.993	49.000	0.667	0.015	Y	NA
4587017	4587018	YPE_0683	YPE_0684			FALSE	0.249	126.000	0.000	NA		NA
4587018	4587020	YPE_0684	YPE_0685			FALSE	0.056	294.000	0.000	NA		NA
4587020	4587021	YPE_0685	YPE_0686			TRUE	0.816	14.000	0.093	1.000	N	NA
4587022	4587023	YPE_0687	YPE_0688			FALSE	0.016	689.000	0.000	NA		NA
4587023	4587024	YPE_0688	YPE_0689			FALSE	0.035	371.000	0.000	NA		NA
4587024	4587025	YPE_0689	YPE_0691N		pbpC	TRUE	0.451	57.000	0.000	NA		NA
4587025	4587027	YPE_0691N	YPE_0692	pbpC		FALSE	0.346	72.000	0.000	NA		NA
4587030	4587031	YPE_0695	YPE_0696	pta	ackA	TRUE	0.866	168.000	0.634	1.000		NA
4587031	4587032	YPE_0696	YPE_0697	ackA		TRUE	0.908	-10.000	0.000	NA		NA
4587033	4587034	YPE_0698	YPE_0699			FALSE	0.235	308.000	0.221	NA		NA
4587034	4587035	YPE_0699	YPE_0700			TRUE	0.758	159.000	0.375	NA		NA
4587035	4587036	YPE_0700	YPE_0701			FALSE	0.174	292.000	0.136	1.000		NA
4587036	4587037	YPE_0701	YPE_0702			TRUE	0.656	27.000	0.000	NA		NA
4587038	4587039	YPE_0703	YPE_0704	yfbR	yfbQ	TRUE	0.421	151.000	0.104	1.000		NA
4587040	4587041	YPE_0705	YPE_0706		lrhA	FALSE	0.025	451.000	0.000	NA		NA
4587041	4587042	YPE_0706	YPE_0707	lrhA	nuoA	FALSE	0.006	684.000	0.000	1.000	N	NA
4587042	4587043	YPE_0707	YPE_0708	nuoA	nuoB	TRUE	0.967	102.000	0.377	0.002	Y	NA
4587043	4587044	YPE_0708	YPE_0709	nuoB	nuoC	TRUE	0.982	141.000	0.691	0.002	Y	NA
4587044	4587045	YPE_0709	YPE_0710	nuoC	nuoE	TRUE	0.988	48.000	0.407	0.006	Y	NA
4587045	4587046	YPE_0710	YPE_0711	nuoE	nuoF	TRUE	0.998	-3.000	0.186	0.006	Y	NA
4587046	4587047	YPE_0711	YPE_0712	nuoF	nuoG	TRUE	0.935	87.000	0.180	0.006	Y	NA
4587047	4587048	YPE_0712	YPE_0713	nuoG	nuoH	TRUE	1.000	-3.000	0.664	0.006	Y	NA
4587048	4587049	YPE_0713	YPE_0714	nuoH	nuoI	TRUE	0.996	15.000	0.423	0.006	Y	NA
4587049	4587050	YPE_0714	YPE_0715	nuoI	nuoJ	TRUE	0.997	13.000	0.428	0.006	Y	NA
4587050	4587051	YPE_0715	YPE_0716	nuoJ	nuoK	TRUE	0.999	-3.000	0.269	0.002	Y	NA
4587051	4587052	YPE_0716	YPE_0717	nuoK	nuoL	TRUE	0.998	-3.000	0.211	0.006	Y	NA
4587052	4587053	YPE_0717	YPE_0718	nuoL	nuoM	TRUE	0.996	40.000	0.713	0.001	Y	NA
4587053	4587054	YPE_0718	YPE_0719	nuoM	nuoN	TRUE	0.998	7.000	0.437	0.001	Y	NA
4587054	4587055	YPE_0719	YPE_0720	nuoN		FALSE	0.073	236.000	0.011	NA		NA
4587056	4587057	YPE_0721	YPE_0722		idnK	TRUE	0.839	78.000	0.095	NA	Y	NA
4587057	4587058	YPE_0722	YPE_0723	idnK	idnO	TRUE	0.570	49.000	0.095	1.000	N	NA
4587058	4587059	YPE_0723	YPE_0724	idnO		FALSE	0.016	759.000	0.000	1.000		NA
4587060	4587061	YPE_0725	YPE_0726			FALSE	0.009	466.000	0.000	1.000	N	NA
4587061	4587062	YPE_0726	YPE_0727			FALSE	0.289	531.000	0.667	1.000	N	NA
4587062	4587063	YPE_0727	YPE_0728			TRUE	0.642	30.000	0.036	NA		NA
4587063	4587064	YPE_0728	YPE_0729		edd	TRUE	0.840	4.000	0.008	NA		NA
4587064	4587065	YPE_0729	YPE_0730	edd		FALSE	0.385	66.000	0.000	NA		NA
4587065	4587066	YPE_0730	YPE_0731		elaB	FALSE	0.017	648.000	0.000	NA		NA
4587066	4587067	YPE_0731	YPE_0732	elaB		FALSE	0.019	555.000	0.000	NA		NA
4587067	4587068	YPE_0732	YPE_0733		menF	FALSE	0.020	528.000	0.000	NA		NA
4587068	4587069	YPE_0733	YPE_0734	menF	menD	TRUE	0.780	228.000	0.281	1.000	Y	NA
4587069	4587070	YPE_0734	YPE_0735	menD	yfbB	TRUE	0.993	-3.000	0.355	NA		NA
4587070	4587071	YPE_0735	YPE_0736	yfbB	menB	TRUE	0.964	14.000	0.280	NA		NA
4587071	4587072	YPE_0736	YPE_0737	menB	menC	TRUE	0.998	0.000	0.171	0.002	Y	NA
4587072	4587073	YPE_0737	YPE_0738	menC	menE	TRUE	0.991	-12.000	0.283	0.002	N	NA
4587073	4587074	YPE_0738	YPE_0739	menE		FALSE	0.197	66.000	0.000	1.000	N	NA
4587077	4587078	YPE_0742	YPE_0743			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4587080	4587081	YPE_0745	YPE_0746	glnQ	glnP	TRUE	0.991	-3.000	0.051	1.000	Y	NA
4587081	4587082	YPE_0746	YPE_0747	glnP	glnH	TRUE	0.961	35.000	0.103	0.086	Y	NA
4587082	4587083	YPE_0747	YPE_0748	glnH		FALSE	0.020	570.000	0.000	1.000		NA
4587083	4587084	YPE_0748	YPE_0749		dps	FALSE	0.051	320.000	0.000	1.000		NA
4587084	4587085	YPE_0749	YPE_0750	dps	tam	FALSE	0.081	257.000	0.000	1.000		NA
4587085	4587086	YPE_0750	YPE_0751	tam		TRUE	0.849	23.000	0.000	0.049		NA
4587086	4587087	YPE_0751	YPE_0752			TRUE	0.698	16.000	0.016	NA		NA
4587088	4587089	YPE_0753	YPE_0754	ompX		FALSE	0.019	316.000	0.000	1.000	N	NA
4587089	4587090	YPE_0754	YPE_0755			FALSE	0.097	238.000	0.000	NA		NA
4587090	4587091	YPE_0755	YPE_0756			FALSE	0.157	196.000	0.000	NA		NA
4587091	4587092	YPE_0756	YPE_0757		gutB	FALSE	0.018	583.000	0.000	NA		NA
4587092	4587093	YPE_0757	YPE_0758	gutB	rbsB	FALSE	0.312	175.000	0.125	1.000	N	NA
4587093	4587094	YPE_0758	YPE_0759	rbsB		TRUE	0.965	40.000	0.125	0.015	Y	NA
4587094	4587095	YPE_0759	YPE_0760			TRUE	0.996	-3.000	0.111	0.015	Y	NA
4587096	4587097	YPE_0761	YPE_0762			TRUE	0.511	247.000	0.000	0.064	Y	NA
4587098	4587099	YPE_0763	YPE_0764			FALSE	0.361	69.000	0.000	NA		NA
4587099	4587100	YPE_0764	YPE_0765			FALSE	0.036	366.000	0.000	NA		NA
4587100	4587101	YPE_0765	YPE_0766			TRUE	0.488	117.000	0.167	1.000	N	NA
4587101	4587102	YPE_0766	YPE_0767			FALSE	0.368	96.000	0.000	0.043	N	NA
4587102	4587103	YPE_0767	YPE_0768			FALSE	0.007	652.000	0.000	1.000	N	NA
4587103	4587104	YPE_0768	YPE_0769			TRUE	0.680	144.000	0.000	1.000	Y	NA
4587104	4587105	YPE_0769	YPE_0770			TRUE	0.837	8.000	0.000	NA		NA
4587105	4587106	YPE_0770	YPE_0771			FALSE	0.088	245.000	0.000	NA		NA
4587108	4587109	YPE_0773	YPE_0774			TRUE	0.823	10.000	0.000	NA		NA
4587109	4587110	YPE_0774	YPE_0775			FALSE	0.143	203.000	0.000	NA		NA
4587110	4587111	YPE_0775	YPE_0776			FALSE	0.230	142.000	0.000	NA		NA
4587111	4587112	YPE_0776	YPE_0777			FALSE	0.277	100.000	0.000	NA		NA
4587112	4587113	YPE_0777	YPE_0778			FALSE	0.074	258.000	0.000	NA		NA
4587114	4587115	YPE_0779	YPE_0780	mtlK	manB2	TRUE	0.734	100.000	0.000	1.000	Y	NA
4587115	4587116	YPE_0780	YPE_0781	manB2		TRUE	0.530	17.000	0.000	1.000	N	NA
4587117	4587118	YPE_0782	YPE_0783			TRUE	0.982	109.000	0.733	0.068	Y	NA
4587118	4587119	YPE_0783	YPE_0784			TRUE	0.999	1.000	0.711	0.068	Y	NA
4587119	4587120	YPE_0784	YPE_0785			TRUE	0.670	147.000	0.000	NA	Y	NA
4587120	4587121	YPE_0785	YPE_0786			TRUE	0.656	27.000	0.000	NA		NA
4587121	4587122	YPE_0786	YPE_0787			FALSE	0.252	123.000	0.000	NA		NA
4587122	4587123	YPE_0787	YPE_0788			TRUE	0.560	39.000	0.000	NA		NA
11514273	4587125		YPE_0790			FALSE	NA	121.000	0.000	NA		NA
11656636	4587125		YPE_0790			FALSE	NA	121.000	0.000	NA		NA
11799028	4587125		YPE_0790			FALSE	NA	121.000	0.000	NA		NA
11514274	4587125		YPE_0790			FALSE	NA	88.000	0.000	NA		NA
11656637	4587125		YPE_0790			FALSE	NA	88.000	0.000	NA		NA
11799029	4587125		YPE_0790			FALSE	NA	88.000	0.000	NA		NA
11514275	4587125		YPE_0790			FALSE	NA	60.000	0.000	NA		NA
11656638	4587125		YPE_0790			FALSE	NA	60.000	0.000	NA		NA
11799030	4587125		YPE_0790			FALSE	NA	60.000	0.000	NA		NA
11514276	4587125		YPE_0790			FALSE	NA	28.000	0.000	NA		NA
11656639	4587125		YPE_0790			FALSE	NA	28.000	0.000	NA		NA
11799031	4587125		YPE_0790			FALSE	NA	28.000	0.000	NA		NA
11514277	4587125		YPE_0790			FALSE	NA	0.000	0.000	NA		NA
11656640	4587125		YPE_0790			FALSE	NA	0.000	0.000	NA		NA
11799032	4587125		YPE_0790			FALSE	NA	0.000	0.000	NA		NA
4587125	4587126	YPE_0790	YPE_0791			FALSE	0.033	382.000	0.000	NA		NA
11514278	4587125		YPE_0790			FALSE	NA	-32.000	0.000	NA		NA
11656641	4587125		YPE_0790			FALSE	NA	-32.000	0.000	NA		NA
11799033	4587125		YPE_0790			FALSE	NA	-32.000	0.000	NA		NA
11514279	4587125		YPE_0790			FALSE	NA	-60.000	0.000	NA		NA
11656642	4587125		YPE_0790			FALSE	NA	-60.000	0.000	NA		NA
11799034	4587125		YPE_0790			FALSE	NA	-60.000	0.000	NA		NA
11514280	4587125		YPE_0790			FALSE	NA	-92.000	0.000	NA		NA
11656643	4587125		YPE_0790			FALSE	NA	-92.000	0.000	NA		NA
11799035	4587125		YPE_0790			FALSE	NA	-92.000	0.000	NA		NA
11514281	4587125		YPE_0790			FALSE	NA	-120.000	0.000	NA		NA
11656644	4587125		YPE_0790			FALSE	NA	-120.000	0.000	NA		NA
11799036	4587125		YPE_0790			FALSE	NA	-120.000	0.000	NA		NA
11514282	4587125		YPE_0790			FALSE	NA	-152.000	0.000	NA		NA
11656645	4587125		YPE_0790			FALSE	NA	-152.000	0.000	NA		NA
11799037	4587125		YPE_0790			FALSE	NA	-152.000	0.000	NA		NA
11514283	4587125		YPE_0790			FALSE	NA	-179.000	0.000	NA		NA
11656646	4587125		YPE_0790			FALSE	NA	-179.000	0.000	NA		NA
11799038	4587125		YPE_0790			FALSE	NA	-179.000	0.000	NA		NA
11514284	4587125		YPE_0790			FALSE	NA	-151.000	0.000	NA		NA
11656647	4587125		YPE_0790			FALSE	NA	-151.000	0.000	NA		NA
11799039	4587125		YPE_0790			FALSE	NA	-151.000	0.000	NA		NA
11514285	4587125		YPE_0790			FALSE	NA	-119.000	0.000	NA		NA
11656648	4587125		YPE_0790			FALSE	NA	-119.000	0.000	NA		NA
11799040	4587125		YPE_0790			FALSE	NA	-119.000	0.000	NA		NA
11514286	4587125		YPE_0790			FALSE	NA	-91.000	0.000	NA		NA
11656649	4587125		YPE_0790			FALSE	NA	-91.000	0.000	NA		NA
11799041	4587125		YPE_0790			FALSE	NA	-91.000	0.000	NA		NA
11514287	4587125		YPE_0790			FALSE	NA	-59.000	0.000	NA		NA
11656650	4587125		YPE_0790			FALSE	NA	-59.000	0.000	NA		NA
11799042	4587125		YPE_0790			FALSE	NA	-59.000	0.000	NA		NA
11514288	4587125		YPE_0790			FALSE	NA	-31.000	0.000	NA		NA
11656651	4587125		YPE_0790			FALSE	NA	-31.000	0.000	NA		NA
11799043	4587125		YPE_0790			FALSE	NA	-31.000	0.000	NA		NA
11514289	4587125		YPE_0790			FALSE	NA	1.000	0.000	NA		NA
11656652	4587125		YPE_0790			FALSE	NA	1.000	0.000	NA		NA
11799044	4587125		YPE_0790			FALSE	NA	1.000	0.000	NA		NA
4587126	4587127	YPE_0791	YPE_0792			TRUE	0.998	-3.000	0.707	NA		NA
4587127	4587128	YPE_0792	YPE_0793			FALSE	0.258	116.000	0.000	NA		NA
4587128	4587129	YPE_0793	YPE_0794			TRUE	0.568	38.000	0.000	NA		NA
4587129	4587130	YPE_0794	YPE_0795			TRUE	0.998	-3.000	0.895	NA		NA
4587130	4587131	YPE_0795	YPE_0796			TRUE	0.990	18.000	0.787	NA		NA
4587131	4587132	YPE_0796	YPE_0797			TRUE	0.985	11.000	0.468	NA		NA
4587133	4587134	YPE_0798	YPE_0799			TRUE	0.993	11.000	0.714	1.000		NA
4587134	4587135	YPE_0799	YPE_0800			TRUE	0.896	47.000	0.286	1.000		NA
4587136	4587137	YPE_0801	YPE_0802		ypeR	FALSE	0.203	486.000	0.000	0.062	Y	NA
4587139	4587140	YPE_0804	YPE_0805			TRUE	0.576	37.000	0.000	NA		NA
4587140	4587141	YPE_0805	YPE_0806			FALSE	0.242	132.000	0.000	NA		NA
4587141	4587142	YPE_0806	YPE_0807			FALSE	0.172	187.000	0.000	NA		NA
4587142	4587143	YPE_0807	YPE_0808			TRUE	0.526	44.000	0.000	NA		NA
4587143	4587144	YPE_0808	YPE_0809			FALSE	0.219	149.000	0.033	NA		NA
4587145	4587146	YPE_0810	YPE_0811		solA	FALSE	0.028	267.000	0.000	1.000	N	NA
4587146	4587147	YPE_0811	YPE_1733C	solA		FALSE	0.081	251.000	0.000	NA		NA
4587152	4587153	YPE_0815	YPE_0816			TRUE	0.676	25.000	0.000	NA		NA
4587153	4587154	YPE_0816	YPE_0817		yfeD	FALSE	0.369	68.000	0.000	NA		NA
4587154	4587155	YPE_0817	YPE_0818	yfeD	yfeC	TRUE	0.999	-3.000	0.525	0.006	Y	NA
4587155	4587156	YPE_0818	YPE_0819	yfeC	yfeB	TRUE	0.999	0.000	0.857	1.000	Y	NA
4587156	4587157	YPE_0819	YPE_0820	yfeB	yfeA	TRUE	1.000	-3.000	0.894	1.000	Y	NA
4587161	4587162	YPE_0824	YPE_0825			FALSE	0.050	310.000	0.000	NA		NA
4587163	4587164	YPE_0826	YPE_0827	thrS	infC	TRUE	0.993	4.000	0.186	1.000	Y	NA
4587164	4587165	YPE_0827	YPE_0828	infC	rpmI	TRUE	0.972	97.000	0.652	1.000	Y	NA
4587165	4587166	YPE_0828	YPE_0829	rpmI	rplT	TRUE	0.997	38.000	0.928	0.014	Y	NA
4587166	4587167	YPE_0829	YPE_0830	rplT	pheM	FALSE	0.282	98.000	0.000	NA		NA
4587167	4587168	YPE_0830	YPE_0831	pheM	pheS	FALSE	0.037	357.000	0.000	NA		NA
4587168	4587169	YPE_0831	YPE_0832	pheS	pheT	TRUE	0.998	14.000	0.574	0.001	Y	NA
4587169	4587170	YPE_0832	YPE_0833	pheT	ihfA	TRUE	0.960	5.000	0.208	1.000	N	NA
4587170	4587171	YPE_0833	YPE_0834	ihfA		FALSE	0.043	334.000	0.000	NA		NA
4587171	4587172	YPE_0834	YPE_0835		btuC	FALSE	0.124	227.000	0.044	NA		NA
4587172	4587173	YPE_0835	YPE_0836	btuC	btuE	FALSE	0.387	70.000	0.084	1.000	N	NA
4587173	4587174	YPE_0836	YPE_0837	btuE	btuD	TRUE	0.498	22.000	0.036	1.000	N	NA
4587174	4587175	YPE_0837	YPE_0838	btuD	arnB	FALSE	0.076	350.000	0.129	1.000	N	NA
4587175	4587176	YPE_0838	YPE_0839	arnB	arnC	TRUE	0.997	-13.000	0.378	NA	Y	NA
4587176	4587177	YPE_0839	YPE_0840	arnC	arnA	TRUE	0.997	-3.000	0.220	NA	Y	NA
4587177	4587178	YPE_0840	YPE_0841	arnA		TRUE	0.999	-3.000	0.447	1.000	Y	NA
4587178	4587179	YPE_0841	YPE_0842			TRUE	0.916	-3.000	0.061	1.000	N	NA
4587179	4587180	YPE_0842	YPE_0843			TRUE	0.989	-3.000	0.227	1.000		NA
4587180	4587181	YPE_0843	YPE_0844			TRUE	0.997	-3.000	0.613	NA		NA
4587181	4587182	YPE_0844	YPE_0845		nlpC	FALSE	0.209	280.000	0.161	NA		NA
4587182	4587183	YPE_0845	YPE_0846	nlpC	lplA	FALSE	0.280	125.000	0.091	NA	N	NA
4587183	4587184	YPE_0846	YPE_0847	lplA	ydiU	FALSE	0.403	64.000	0.000	NA		NA
4587186	4587187	YPE_0848	YPE_0849	aroH		TRUE	0.536	157.000	0.165	1.000		NA
4587189	4587190	YPE_0851	YPE_0852	rprA		FALSE	0.071	264.000	0.000	NA		NA
4587191	4587192	YPE_0853	YPE_0854			FALSE	0.393	122.000	0.129	NA	N	NA
4587192	4587193	YPE_0854	YPE_0855			FALSE	0.074	259.000	0.000	NA		NA
4587193	4587194	YPE_0855	YPE_0856			FALSE	0.189	178.000	0.000	NA		NA
4587194	4587195	YPE_0856	YPE_0857			TRUE	0.783	15.000	0.041	NA		NA
4587195	4587196	YPE_0857	YPE_0858			TRUE	0.920	186.000	0.466	1.000	Y	NA
4587196	4587197	YPE_0858	YPE_0859			TRUE	0.965	77.000	0.482	1.000	Y	NA
4587197	4587198	YPE_0859	YPE_0860		sufS	TRUE	0.980	-3.000	0.193	1.000	N	NA
4587198	4587199	YPE_0860	YPE_0861	sufS		TRUE	0.663	89.000	0.183	NA		NA
4587199	4587200	YPE_0861	YPE_0863			FALSE	0.066	271.000	0.000	NA		NA
4587202	4587203	YPE_0864	YPE_0865			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4587203	4587204	YPE_0865	YPE_0866		tnp	FALSE	0.162	582.000	0.000	0.092	Y	NA
4587204	4587205	YPE_0866	YPE_0867	tnp	lpp	FALSE	0.072	191.000	0.000	1.000	N	NA
4587205	4587206	YPE_0867	YPE_0868	lpp	pykF	FALSE	0.019	321.000	0.000	1.000	N	NA
4587206	4587207	YPE_0868	YPE_0869	pykF		FALSE	0.018	576.000	0.000	NA		NA
4587207	4587208	YPE_0869	YPE_0870			TRUE	0.432	60.000	0.000	NA		NA
4587208	4587209	YPE_0870	YPE_0871			FALSE	0.091	243.000	0.000	NA		NA
4587211	4587212	YPE_0873	YPE_0874	cfa		FALSE	0.009	480.000	0.000	1.000	N	NA
4587214	4587215	YPE_0876	YPE_0877	purR	sodB	FALSE	0.008	527.000	0.000	1.000	N	NA
4587215	4587216	YPE_0877	YPE_0878	sodB		FALSE	0.007	378.000	0.015	1.000	N	NA
4587217	4587218	YPE_0879	YPE_0880			FALSE	0.277	100.000	0.000	NA		NA
4587219	4587220	YPE_0881	YPE_0882	rnt	gloA	TRUE	0.431	112.000	0.136	1.000	N	NA
4587222	4587223	YPE_0884	YPE_0885			TRUE	0.777	88.000	0.362	1.000	N	NA
4587223	4587224	YPE_0885	YPE_0886			FALSE	0.290	223.000	0.128	1.000		NA
4587225	4587226	YPE_0887	YPE_0888			FALSE	0.273	132.000	0.045	NA		NA
4587226	4587227	YPE_0888	YPE_0889		rovA	FALSE	0.016	798.000	0.000	1.000		NA
4587229	4587230	YPE_0891	YPE_0892			TRUE	0.445	58.000	0.034	NA		NA
4587230	4587231	YPE_0892	YPE_0893		pdxH	FALSE	0.294	91.000	0.034	NA		NA
4587231	4587232	YPE_0893	YPE_0894	pdxH	tyrS	FALSE	0.129	182.000	0.054	1.000	N	NA
4587232	4587233	YPE_0894	YPE_0895	tyrS	pdxY	FALSE	0.120	155.000	0.041	1.000	N	NA
4587235	4587236	YPE_0897	YPE_0898			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4587237	4587238	YPE_0899	YPE_0900			FALSE	0.087	246.000	0.000	NA		NA
4587238	4587239	YPE_0900	YPE_0901		tppB	FALSE	0.077	255.000	0.000	NA		NA
4587239	4587240	YPE_0901	YPE_0902	tppB		FALSE	0.017	643.000	0.000	NA		NA
4587240	4587241	YPE_0902	YPE_0903		sapF	FALSE	0.031	390.000	0.000	NA		NA
4587241	4587242	YPE_0903	YPE_0904	sapF	sapD	TRUE	0.999	0.000	0.684	0.022	Y	NA
4587242	4587243	YPE_0904	YPE_0905	sapD	sapC	TRUE	0.999	0.000	0.667	1.000	Y	NA
4587243	4587244	YPE_0905	YPE_0906	sapC	sapB	TRUE	0.998	-13.000	0.284	0.066	Y	NA
4587244	4587245	YPE_0906	YPE_0907	sapB	sapA	TRUE	0.992	-3.000	0.264	0.066	N	NA
4587245	4587246	YPE_0907	YPE_0908	sapA		FALSE	0.237	136.000	0.000	NA		NA
4587247	4587248	YPE_0909	YPE_0910	ryhB2	tnp	FALSE	0.227	146.000	0.000	NA		NA
4587250	4587251	YPE_0912	YPE_0913	pspA	pspB	TRUE	0.896	162.000	0.739	NA		NA
4587251	4587252	YPE_0913	YPE_0914	pspB	pspC	TRUE	0.998	0.000	0.913	NA		NA
4587252	4587253	YPE_0914	YPE_0915	pspC		FALSE	0.204	308.000	0.190	NA		NA
4587253	4587254	YPE_0915	YPE_0916			TRUE	0.998	-3.000	0.791	NA		NA
4587255	4587256	YPE_0917	YPE_0918			TRUE	0.902	62.000	0.412	NA		NA
4587258	4587259	YPE_0920	YPE_0921	tnp	tpx	FALSE	0.033	253.000	0.000	1.000	N	NA
4587262	4587263	YPE_0924	YPE_0925	mppA		FALSE	0.022	243.000	0.019	1.000	N	NA
4587264	4587265	YPE_0926	YPE_0927			FALSE	0.020	312.000	0.000	1.000	N	NA
4587265	4587266	YPE_0927	YPE_0928			FALSE	0.023	271.000	0.000	NA	N	NA
4587266	4587267	YPE_0928	YPE_0929		nifJ	FALSE	0.022	275.000	0.000	NA	N	NA
4587271	4587272	YPE_0933	YPE_0934	hslJ	ldhA	FALSE	0.112	70.000	0.024	NA	N	NA
4587273	4587274	YPE_0935	YPE_0936			TRUE	0.893	6.000	0.057	NA		NA
4587274	4587275	YPE_0936	YPE_0937			TRUE	0.993	10.000	0.726	NA		NA
4587279	4587280	YPE_0941	YPE_0942	hrpA		FALSE	0.038	354.000	0.000	NA		NA
4587280	4587281	YPE_0942	YPE_0943			TRUE	0.963	-3.000	0.077	NA		NA
4587282	4587283	YPE_0944	YPE_0945			FALSE	0.043	334.000	0.000	NA		NA
4587283	4587284	YPE_0945	YPE_0946			TRUE	0.934	-3.000	0.000	NA		NA
4587285	4587286	YPE_0947	YPE_0948			TRUE	0.982	26.000	0.676	NA		NA
4587287	4587288	YPE_0949	YPE_0950			TRUE	0.900	3.000	0.000	NA		NA
4587290	4587291	YPE_0952	YPE_0953		rstB	TRUE	0.719	94.000	0.300	1.000	N	NA
4587291	4587292	YPE_0953	YPE_0954	rstB	rstA	TRUE	0.972	28.000	0.181	1.000	Y	NA
4587294	4587295	YPE_0956	YPE_0957			FALSE	0.198	270.000	0.143	NA		NA
4587296	4587297	YPE_0958	YPE_0959		pntA	FALSE	0.196	121.000	0.010	NA		NA
4587297	4587298	YPE_0959	YPE_0960	pntA	pntB	TRUE	0.991	73.000	0.745	0.001	Y	NA
4587299	4587300	YPE_0961	YPE_0962		fnr	TRUE	0.962	135.000	0.619	1.000	Y	NA
4587300	4587301	YPE_0962	YPE_0963	fnr	ogt	FALSE	0.184	73.000	0.038	1.000	N	NA
4587302	4587303	YPE_0964	YPE_0965	phoA		FALSE	0.019	546.000	0.000	NA		NA
4587303	4587304	YPE_0965	YPE_0966			TRUE	0.924	0.000	0.000	NA		NA
4587304	4587305	YPE_0966	YPE_0967			FALSE	0.239	131.000	0.033	NA		NA
4587306	4587307	YPE_0968	YPE_0969	ilvN		TRUE	0.998	2.000	0.649	0.002		NA
4587309	4587310	YPE_0971	YPE_0972			TRUE	0.993	-3.000	0.333	NA		NA
4587310	4587311	YPE_0972	YPE_0973			TRUE	0.943	5.000	0.111	NA		NA
4587313	4587314	YPE_0975	YPE_0976			TRUE	0.999	4.000	0.520	0.065	Y	NA
4587315	4587316	YPE_0977	YPE_0978			FALSE	0.403	64.000	0.000	NA		NA
4587316	4587317	YPE_0978	YPE_0979			FALSE	0.253	122.000	0.000	NA		NA
4587318	4587319	YPE_0980	YPE_0981			FALSE	0.022	483.000	0.000	NA		NA
4587319	4587320	YPE_0981	YPE_0982			TRUE	0.996	0.000	0.625	NA		NA
4587320	4587321	YPE_0982	YPE_0983			TRUE	0.992	4.000	0.500	NA		NA
4587321	4587322	YPE_0983	YPE_0984			TRUE	0.991	13.000	0.714	NA		NA
4587322	4587323	YPE_0984	YPE_0985			TRUE	0.889	65.000	0.400	NA		NA
4587323	4587324	YPE_0985	YPE_0986			TRUE	0.996	-3.000	0.500	NA		NA
4587324	4587325	YPE_0986	YPE_0987			TRUE	0.991	3.000	0.400	NA		NA
4587325	4587326	YPE_0987	YPE_0988			TRUE	0.960	12.000	0.222	NA		NA
4587327	4587328	YPE_0989	YPE_0990			FALSE	0.285	97.000	0.000	NA		NA
4587328	4587329	YPE_0990	YPE_0991			TRUE	0.703	22.000	0.000	NA		NA
4587329	4587330	YPE_0991	YPE_0992			FALSE	0.034	375.000	0.000	NA		NA
4587331	4587332	YPE_0993	YPE_0994	ynfK	mlc	TRUE	0.580	224.000	0.455	1.000	N	NA
4587333	4587335	YPE_4353	YPE_0996	ynfM	tus	FALSE	0.138	205.000	0.000	NA		NA
4587337	4587338	YPE_0998	YPE_0999	manA		TRUE	0.781	240.000	0.778	NA		NA
4587339	4587340	YPE_1000	YPE_1001			FALSE	0.136	206.000	0.000	NA		NA
4587340	4587341	YPE_1001	YPE_1002			FALSE	0.172	194.000	0.000	1.000		NA
4587341	4587342	YPE_1002	YPE_1003		araC	TRUE	0.721	128.000	0.276	1.000		NA
4587342	4587343	YPE_1003	YPE_1004	araC	araH	FALSE	0.312	221.000	0.196	1.000	N	NA
4587343	4587344	YPE_1004	YPE_1005	araH	araG	TRUE	0.996	18.000	0.451	0.014	Y	NA
4587344	4587345	YPE_1005	YPE_1006	araG	araF	TRUE	0.988	131.000	0.917	0.014	Y	NA
4587346	4587347	YPE_1007	YPE_1008	araB	araA	FALSE	0.196	84.000	0.046	1.000	N	NA
4587348	4587349	YPE_1009	YPE_1010			TRUE	0.912	2.000	0.000	NA		NA
4587349	4587351	YPE_1010	YPE_1011			TRUE	0.676	25.000	0.000	NA		NA
4587353	4587354	YPE_1012	YPE_1013		rsxA	TRUE	0.539	128.000	0.148	NA		NA
4587354	4587355	YPE_1013	YPE_1014	rsxA	rsxB	TRUE	0.999	0.000	0.564	0.041	Y	NA
4587355	4587356	YPE_1014	YPE_1015	rsxB	rsxC	TRUE	0.990	50.000	0.537	0.012	Y	NA
4587358	4587359	YPE_1017	YPE_1018			TRUE	0.999	10.000	0.924	0.041	Y	NA
4587359	4587360	YPE_1018	YPE_1019			TRUE	1.000	-3.000	0.908	0.041	Y	NA
4587360	4587361	YPE_1019	YPE_1020		nth	TRUE	0.957	-3.000	0.109	1.000	N	NA
4587362	4587363	YPE_1021	YPE_1022			TRUE	0.944	35.000	0.103	1.000	Y	NA
4587364	4587365	YPE_1023	YPE_1024	rnb	cstA	FALSE	0.016	350.000	0.000	1.000	N	NA
4587365	4587366	YPE_1024	YPE_1025	cstA		TRUE	0.975	-7.000	0.143	NA		NA
4587371	4587372	YPE_1030	YPE_1031		pyrF	TRUE	0.866	0.000	0.045	1.000	N	NA
4587374	4587375	YPE_1033	YPE_1034			TRUE	0.992	7.000	0.576	1.000		NA
4587375	4587376	YPE_1034	YPE_1035		pgpB	TRUE	0.481	169.000	0.143	1.000		NA
4587378	4587379	YPE_1037	YPE_1038	acnA		FALSE	0.036	364.000	0.000	NA		NA
4587379	4587380	YPE_1038	YPE_1039		cysB	FALSE	0.042	336.000	0.000	NA		NA
4587380	4587381	YPE_1039	YPE_1040	cysB	topA	FALSE	0.005	397.000	0.008	1.000	N	NA
4587381	4587382	YPE_1040	YPE_1041	topA		TRUE	0.656	27.000	0.000	NA		NA
4587385	4587386	YPE_1044	YPE_1045		btuR	TRUE	0.632	17.000	0.050	1.000	N	NA
4587387	4587388	YPE_1046	YPE_1047			FALSE	0.209	425.000	0.075	NA	Y	NA
4587388	4587389	YPE_1047	YPE_1048		trpH	TRUE	0.957	17.000	0.281	NA		NA
4587390	4587391	YPE_1049	YPE_1050			TRUE	0.641	29.000	0.000	NA		NA
4587391	4587392	YPE_1050	YPE_1051		trpE	FALSE	0.228	116.000	0.023	NA		NA
4587392	4587393	YPE_1051	YPE_1052	trpE	trpG	TRUE	1.000	0.000	0.703	0.002	Y	NA
4587393	4587394	YPE_1052	YPE_1053	trpG	trpD	TRUE	0.976	12.000	0.083	1.000	Y	NA
4587394	4587395	YPE_1053	YPE_1054	trpD	trpC	TRUE	0.996	4.000	0.293	1.000	Y	NA
4587395	4587396	YPE_1054	YPE_1055	trpC	trpB	TRUE	0.927	157.000	0.221	0.001	Y	NA
4587396	4587397	YPE_1055	YPE_1056	trpB	trpA	TRUE	1.000	0.000	0.947	0.001	Y	NA
4587397	4587398	YPE_1056	YPE_1057	trpA		FALSE	0.032	343.000	0.018	NA		NA
4587399	4587400	YPE_1058	YPE_1059	ompW		FALSE	0.264	109.000	0.000	NA		NA
4587404	4587405	YPE_1062	YPE_1063	ispZ		TRUE	0.552	80.000	0.167	NA	N	NA
4587405	4587406	YPE_1063	YPE_1064			FALSE	0.088	148.000	0.000	NA	N	NA
4587409	4587410	YPE_1067	YPE_1068		ail1	FALSE	0.117	221.000	0.000	NA		NA
4587411	4587412	YPE_1069	YPE_1070		cls	FALSE	0.361	69.000	0.000	NA		NA
4587412	4587413	YPE_1070	YPE_1071	cls		TRUE	0.622	165.000	0.231	NA		NA
4587414	4587415	YPE_1072	YPE_1073	oppF	oppD	TRUE	0.999	-3.000	0.420	0.002	Y	NA
4587415	4587416	YPE_1073	YPE_1074	oppD	oppC	TRUE	0.996	12.000	0.554	1.000	Y	NA
4587416	4587417	YPE_1074	YPE_1075	oppC	oppB	TRUE	0.998	19.000	0.870	0.065	Y	NA
4587417	4587418	YPE_1075	YPE_1076	oppB	oppA	TRUE	0.913	87.000	0.151	0.065	Y	NA
4587418	4587419	YPE_1076	YPE_1077	oppA		FALSE	0.005	838.000	0.000	NA	N	NA
4587420	4587421	YPE_1078	YPE_1079	adhE		FALSE	0.008	540.000	0.000	1.000	N	NA
4587421	4587422	YPE_1079	YPE_1080			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4587425	4587426	YPE_1083	YPE_1084			FALSE	0.021	307.000	0.000	1.000	N	NA
4587427	4587428	YPE_1085	YPE_1087		purU	FALSE	0.309	84.000	0.000	NA		NA
4587433	4587434	YPE_1091	YPE_1092	xthA	nudG	FALSE	0.217	98.000	0.056	1.000	N	NA
4587435	4587436	YPE_1093	YPE_1094		topB	TRUE	0.976	-3.000	0.123	NA		NA
4587436	4587437	YPE_1094	YPE_1095	topB	selD	FALSE	0.273	59.000	0.041	1.000	N	NA
4587437	4587438	YPE_1095	YPE_1096	selD		FALSE	0.044	225.000	0.033	1.000	N	NA
4587439	4587440	YPE_1097	YPE_1098	sppA	ansA	FALSE	0.360	117.000	0.113	1.000	N	NA
4587440	4587441	YPE_1098	YPE_1099	ansA	pncA	TRUE	0.599	15.000	0.040	1.000	N	NA
4587442	4587443	YPE_1100	YPE_1101		msrB	TRUE	0.751	71.000	0.216	NA		NA
4587444	4587445	YPE_1102	YPE_1103	gapA		TRUE	0.452	314.000	0.154	1.000	Y	NA
4587447	4587448	YPE_1105	YPE_1106			TRUE	0.889	150.000	0.683	NA		NA
4587448	4587449	YPE_1106	YPE_1107			FALSE	0.203	105.000	0.007	NA		NA
4587451	4587452	YPE_1109	YPE_1110			FALSE	0.075	265.000	0.000	1.000		NA
4587456	4587457	YPE_1114	YPE_1115	nhaB	dsbB	TRUE	0.718	236.000	0.723	1.000	N	NA
4587459	4587460	YPE_1117	YPE_1118			TRUE	0.696	17.000	0.019	NA		NA
4587460	4587461	YPE_1118	YPE_1119			TRUE	0.857	4.000	0.019	NA		NA
4587461	4587462	YPE_1119	YPE_1120			FALSE	0.052	305.000	0.000	NA		NA
4587463	4587464	YPE_1121	YPE_1122			TRUE	0.934	-3.000	0.000	NA		NA
4587464	4587465	YPE_1122	YPE_1123			TRUE	0.811	11.000	0.000	NA		NA
4587465	4587466	YPE_1123	YPE_1124			TRUE	0.742	17.000	0.000	NA		NA
4587466	4587467	YPE_1124	YPE_1125			TRUE	0.992	0.000	0.333	NA		NA
4587469	4587470	YPE_1127	YPE_1128			TRUE	0.457	56.000	0.000	NA		NA
4587470	4587471	YPE_1128	YPE_1129			TRUE	0.837	8.000	0.000	NA		NA
4587471	4587472	YPE_1129	YPE_1130			FALSE	0.280	99.000	0.000	NA		NA
4587474	4587475	YPE_1132	YPE_1133			FALSE	0.072	261.000	0.000	NA		NA
4587475	4587476	YPE_1133	YPE_1134			TRUE	0.996	3.000	0.714	NA		NA
4587476	4587477	YPE_1134	YPE_1135		tnp	FALSE	0.254	121.000	0.000	NA		NA
4587477	4587478	YPE_1135	YPE_1136	tnp		FALSE	0.052	305.000	0.000	NA		NA
4587478	4587479	YPE_1136	YPE_1137			TRUE	0.961	3.000	0.120	NA		NA
4587479	4587480	YPE_1137	YPE_1138			TRUE	0.960	1.000	0.094	NA		NA
4587480	4587481	YPE_1138	YPE_1139			TRUE	0.890	87.000	0.531	NA		NA
4587481	4587482	YPE_1139	YPE_1140			TRUE	0.906	13.000	0.111	NA		NA
4587482	4587483	YPE_1140	YPE_1141			TRUE	0.884	66.000	0.400	NA		NA
4587483	4587484	YPE_1141	YPE_1142			TRUE	0.992	-3.000	0.294	NA		NA
4587484	4587485	YPE_1142	YPE_1143			TRUE	0.985	2.000	0.235	NA		NA
4587485	4587486	YPE_1143	YPE_1144			TRUE	0.912	2.000	0.000	NA		NA
4587486	4587487	YPE_1144	YPE_1145			TRUE	0.934	-3.000	0.000	NA		NA
4587487	4587488	YPE_1145	YPE_1146			TRUE	0.986	0.000	0.222	NA		NA
4587488	4587489	YPE_1146	YPE_1147			TRUE	0.994	14.000	1.000	NA		NA
4587489	4587490	YPE_1147	YPE_1148			TRUE	0.946	122.000	1.000	NA		NA
4587490	4587493	YPE_1148	YPE_1149			FALSE	0.013	1389.000	0.000	NA		NA
4587491	4587494	YPE_1150	YPE_1151			TRUE	0.526	44.000	0.000	NA		NA
4587493	4587491	YPE_1149	YPE_1150			TRUE	0.889	-935.000	0.000	NA		NA
4587494	4587495	YPE_1151	YPE_1153			FALSE	0.017	636.000	0.000	NA		NA
4587495	4587496	YPE_1153	YPE_1154			TRUE	0.977	31.000	0.667	NA		NA
4587496	4587497	YPE_1154	YPE_1155			FALSE	0.027	457.000	0.000	1.000		NA
4587497	4587498	YPE_1155	YPE_1156		rzpR	FALSE	0.026	462.000	0.000	1.000		NA
4587498	4587499	YPE_1156	YPE_1157	rzpR		TRUE	0.907	-15.000	0.000	1.000		NA
4587499	4587500	YPE_1157	YPE_1158			TRUE	0.622	31.000	0.000	NA		NA
4587504	4587505	YPE_1162	YPE_1163			TRUE	0.498	49.000	0.000	NA		NA
4587505	4587506	YPE_1163	YPE_1164			TRUE	0.882	4.000	0.000	NA		NA
4587506	4587507	YPE_1164	YPE_1165			TRUE	0.916	1.000	0.000	NA		NA
4587507	4587508	YPE_1165	YPE_1166		ninB	FALSE	0.335	74.000	0.000	NA		NA
4587509	4587510	YPE_1167	YPE_1168			TRUE	0.727	19.000	0.000	NA		NA
4587510	4587511	YPE_1168	YPE_1169			FALSE	0.324	78.000	0.000	NA		NA
4587511	4587512	YPE_1169	YPE_1170			TRUE	0.641	29.000	0.000	NA		NA
4587514	4587515	YPE_1171	YPE_1172			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4587515	4587516	YPE_1172	YPE_1173			FALSE	0.013	1335.000	0.000	NA		NA
4587516	4587517	YPE_1173	YPE_1174			TRUE	0.434	103.000	0.088	NA		NA
4587517	4587518	YPE_1174	YPE_1175			FALSE	0.206	71.000	0.046	NA	N	NA
4587518	4587519	YPE_1175	YPE_1176			TRUE	0.767	141.000	0.363	NA		NA
4587520	4587521	YPE_1177	YPE_1178		minC	FALSE	0.027	426.000	0.000	NA		NA
4587521	4587522	YPE_1178	YPE_1179	minC	minD	TRUE	0.991	25.000	0.466	1.000	Y	NA
4587522	4587523	YPE_1179	YPE_1180	minD	minE	TRUE	0.998	4.000	0.618	NA	Y	NA
4587524	4587525	YPE_1181	YPE_1182	rnd	fadD	FALSE	0.313	160.000	0.115	1.000	N	NA
4587525	4587526	YPE_1182	YPE_1183	fadD		FALSE	0.047	643.000	0.169	1.000	N	NA
4587526	4587527	YPE_1183	YPE_1184			FALSE	0.074	155.000	0.024	1.000	N	NA
4587527	4587528	YPE_1184	YPE_1185			FALSE	0.369	72.000	0.082	1.000	N	NA
4587530	4587531	YPE_1187	YPE_1188			TRUE	0.998	20.000	0.869	0.077	Y	NA
4587531	4587532	YPE_1188	YPE_1189		eda	FALSE	0.006	694.000	0.000	1.000	N	NA
4587532	4587533	YPE_1189	YPE_1190	eda	zwf	TRUE	0.422	242.000	0.034	1.000	Y	NA
4587534	4587535	YPE_1191	YPE_1192	hexR	pykA	FALSE	0.018	330.000	0.000	1.000	N	NA
4587536	4587537	YPE_1193	YPE_1194	lpxM		FALSE	0.313	267.000	0.299	1.000	N	NA
4587537	4587538	YPE_1194	YPE_1195		znuA	TRUE	0.480	84.000	0.131	1.000	N	NA
4587539	4587540	YPE_1196	YPE_1197	znuC	znuB	TRUE	0.999	-3.000	0.755	1.000	Y	NA
4587541	4587542	YPE_1198	YPE_1199	ruvB	ruvA	TRUE	0.973	162.000	0.549	0.001	Y	NA
4587542	4587543	YPE_1199	YPE_1200	ruvA	ruvC	TRUE	0.849	283.000	0.451	0.010	Y	NA
4587543	4587544	YPE_1200	YPE_1201	ruvC		TRUE	0.546	209.000	0.277	1.000		NA
4587544	4587545	YPE_1201	YPE_1202		nudB	TRUE	0.467	58.000	0.035	1.000		NA
4587545	4587546	YPE_1202	YPE_1203	nudB	aspS	TRUE	0.881	0.000	0.050	1.000	N	NA
4587547	4587548	YPE_1204	YPE_1205			TRUE	0.406	180.000	0.126	NA		NA
4587548	4587549	YPE_1205	YPE_1206			FALSE	0.293	191.000	0.089	NA		NA
4587549	4587550	YPE_1206	YPE_1207			TRUE	0.992	-3.000	0.315	NA		NA
4587551	4587552	YPE_1208	YPE_1209	cutC		FALSE	0.138	232.000	0.057	NA		NA
4587554	4587555	YPE_1211	YPE_1212			TRUE	0.997	30.000	1.000	NA	Y	NA
4587555	4587556	YPE_1212	YPE_1213		mviN	FALSE	0.023	476.000	0.000	NA		NA
4587556	4587557	YPE_1213	YPE_1214	mviN		FALSE	0.063	267.000	0.022	1.000		NA
4587557	4587558	YPE_1214	YPE_1215		rimJ	TRUE	0.847	8.000	0.000	1.000		NA
4587559	4587560	YPE_1216	YPE_1217			FALSE	0.134	395.000	0.196	NA		NA
4587561	4587562	YPE_1218	YPE_1219	ycdY		TRUE	0.948	37.000	0.417	1.000		NA
4587564	4587565	YPE_1221	YPE_1222			TRUE	0.966	14.000	0.375	NA	N	NA
4587566	4587568	YPE_1224	YPE_1223			TRUE	0.889	-322.000	0.000	NA		NA
4587570	4587571	YPE_1226	YPE_1227			TRUE	0.999	-3.000	0.440	0.063	Y	NA
4587571	4587572	YPE_1227	YPE_1228			TRUE	0.984	20.000	0.480	0.063		NA
4587572	4587573	YPE_1228	YPE_1229			FALSE	0.057	301.000	0.000	1.000		NA
4587573	4587574	YPE_1229	YPE_1230			FALSE	0.230	142.000	0.000	NA		NA
4587574	4587575	YPE_1230	YPE_1231			FALSE	0.053	301.000	0.000	NA		NA
4587575	4587576	YPE_1231	YPE_1233			FALSE	0.013	1598.000	0.000	NA		NA
4587576	4587577	YPE_1233	YPE_1234			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4587578	4587579	YPE_1235	YPE_1236	tnp	kdsA	FALSE	0.009	482.000	0.000	1.000	N	NA
4587579	4587580	YPE_1236	YPE_1237	kdsA		TRUE	0.471	96.000	0.089	1.000		NA
4587580	4587581	YPE_1237	YPE_1238			TRUE	0.986	-3.000	0.195	NA		NA
4587581	4587582	YPE_1238	YPE_1239		prmC	TRUE	0.631	64.000	0.109	NA		NA
4587582	4587583	YPE_1239	YPE_1240	prmC	prfA	TRUE	0.998	0.000	0.229	0.045	Y	NA
4587583	4587584	YPE_1240	YPE_1241	prfA	hemA	TRUE	0.890	33.000	0.171	0.045	N	NA
4587585	4587586	YPE_1242	YPE_1243		ipk	TRUE	0.964	2.000	0.157	1.000	N	NA
4587586	4587587	YPE_1243	YPE_1244	ipk	prsA	FALSE	0.027	341.000	0.053	1.000	N	NA
4587589	4587590	YPE_1246	YPE_1247	pth	ychF	TRUE	0.836	164.000	0.184	1.000	Y	NA
4587590	4587591	YPE_1247	YPE_1248	ychF		FALSE	0.055	297.000	0.000	NA		NA
4587591	4587592	YPE_1248	YPE_1249			TRUE	0.977	18.000	0.476	NA		NA
4587593	4587594	YPE_1250	YPE_1251			TRUE	0.624	8.000	0.034	NA	N	NA
4587594	4587595	YPE_1251	YPE_1252			TRUE	0.934	-3.000	0.000	NA		NA
4587597	4587598	YPE_1254	YPE_1255			TRUE	0.912	15.000	0.133	NA		NA
4587598	4587599	YPE_1255	YPE_1256			FALSE	0.225	149.000	0.000	NA		NA
4587600	4587601	YPE_1257	YPE_1258	copR		TRUE	0.999	6.000	0.793	0.001	Y	NA
4587601	4587602	YPE_1258	YPE_1259			FALSE	0.069	277.000	0.000	1.000		NA
4587602	4587603	YPE_1259	YPE_1260			TRUE	0.773	55.000	0.154	1.000		NA
4587603	4587604	YPE_1260	YPE_1261			FALSE	0.126	213.000	0.000	NA		NA
4587604	4587605	YPE_1261	YPE_1262			FALSE	0.015	791.000	0.000	NA		NA
4587605	4587606	YPE_1262	YPE_1263			TRUE	0.854	6.000	0.000	NA		NA
4587606	4587607	YPE_1263	YPE_1264			TRUE	0.902	-13.000	0.000	NA		NA
4587607	4587608	YPE_1264	YPE_1265			FALSE	0.041	341.000	0.000	NA		NA
4587608	4587609	YPE_1265	YPE_1266			TRUE	0.474	105.000	0.000	0.046		NA
4587610	4587611	YPE_1267	YPE_1268			FALSE	0.091	247.000	0.000	1.000		NA
4587614	4587615	YPE_1271	YPE_1272			FALSE	0.203	170.000	0.000	NA		NA
4587616	4587617	YPE_1273	YPE_1274			TRUE	0.983	-3.000	0.167	NA		NA
4587617	4587618	YPE_1274	YPE_1275			TRUE	0.934	-3.000	0.000	NA		NA
4587618	4587619	YPE_1275	YPE_1276			TRUE	0.930	0.000	0.000	1.000		NA
4587619	4587620	YPE_1276	YPE_1277			FALSE	0.159	134.000	0.054	NA	N	NA
4587620	4587621	YPE_1277	YPE_1278			TRUE	0.996	-3.000	0.550	NA		NA
4587621	4587622	YPE_1278	YPE_1279			TRUE	0.974	-7.000	0.133	1.000		NA
4587622	4587623	YPE_1279	YPE_1280			TRUE	0.776	14.000	0.000	NA		NA
4587626	4587627	YPE_1283	YPE_1284			TRUE	0.951	0.000	0.067	NA		NA
4587628	4587629	YPE_1285	YPE_1286	hutC	hutI	FALSE	0.028	204.000	0.010	1.000	N	NA
4587629	4587630	YPE_1286	YPE_1287	hutI	hutG	TRUE	0.831	-3.000	0.031	1.000	N	NA
4587631	4587633	YPE_1288	YPE_1289		astE	FALSE	0.012	3571.000	0.000	NA		NA
4587633	4587634	YPE_1289	YPE_1290	astE	astB	TRUE	0.868	61.000	0.063	1.000	Y	NA
4587634	4587635	YPE_1290	YPE_1291	astB	astD	TRUE	0.933	24.000	0.306	1.000	N	NA
4587635	4587636	YPE_1291	YPE_1292	astD	astA	TRUE	0.897	-3.000	0.051	1.000	N	NA
4587636	4587637	YPE_1292	YPE_1293	astA	astC	TRUE	0.987	30.000	0.400	1.000	Y	NA
4587637	4587638	YPE_1293	YPE_1294	astC		FALSE	0.154	198.000	0.000	NA		NA
4587638	4587639	YPE_1294	YPE_1295			FALSE	0.099	236.000	0.000	NA		NA
4587640	4587641	YPE_1296	YPE_1297	narX	chaA	FALSE	0.024	549.000	0.000	0.077	N	NA
4587642	4587643	YPE_1298	YPE_1299	phoH		TRUE	0.544	60.000	0.065	NA		NA
4587643	4587644	YPE_1299	YPE_1300			FALSE	0.026	439.000	0.000	NA		NA
4587644	4587645	YPE_1300	YPE_1301		hmsS	FALSE	0.043	333.000	0.000	NA		NA
4587645	4587646	YPE_1301	YPE_1302	hmsS	hmsR	TRUE	0.981	-3.000	0.154	NA		NA
4587646	4587647	YPE_1302	YPE_1303	hmsR	hmsF	TRUE	0.921	-10.000	0.087	1.000	N	NA
4587647	4587648	YPE_1303	YPE_1304	hmsF	hmsH	TRUE	0.991	13.000	0.696	1.000		NA
4587648	4587649	YPE_1304	YPE_1305	hmsH	pepP1	FALSE	0.018	669.000	0.000	1.000		NA
4587649	4587650	YPE_1305	YPE_1306	pepP1		FALSE	0.221	141.000	0.071	1.000	N	NA
4587650	4587651	YPE_1306	YPE_1307			FALSE	0.188	173.000	0.071	1.000	N	NA
4587651	4587652	YPE_1307	YPE_1308			TRUE	0.986	0.000	0.176	0.012	N	NA
4587652	4587653	YPE_1308	YPE_1309			TRUE	0.912	-10.000	0.078	1.000	N	NA
4587653	4587654	YPE_1309	YPE_1310			TRUE	0.955	4.000	0.175	NA	N	NA
4587654	4587655	YPE_1310	YPE_1311			TRUE	0.997	-10.000	0.878	NA	N	NA
4587655	4587656	YPE_1311	YPE_1312			TRUE	0.995	3.000	0.625	NA		NA
4587656	4587657	YPE_1312	YPE_1313			FALSE	0.398	301.000	0.386	NA		NA
4587657	4587658	YPE_1313	YPE_1314			TRUE	0.695	204.000	0.133	NA	Y	NA
4587658	4587659	YPE_1314	YPE_1315			FALSE	0.007	581.000	0.000	1.000	N	NA
4587659	4587660	YPE_1315	YPE_1316			FALSE	0.102	111.000	0.028	1.000	N	NA
4587661	4587662	YPE_1317	YPE_1318			FALSE	0.006	725.000	0.000	1.000	N	NA
4587666	4587667	YPE_1322	YPE_1323			TRUE	0.894	66.000	0.417	1.000		NA
4587667	4587668	YPE_1323	YPE_1324			FALSE	0.119	220.000	0.000	NA		NA
4587668	4587669	YPE_1324	YPE_1325			TRUE	0.676	25.000	0.000	NA		NA
4587671	4587672	YPE_1327	YPE_1328		ripB	TRUE	0.916	65.000	0.600	1.000	N	NA
4587672	4587673	YPE_1328	YPE_1329	ripB	ripA	TRUE	0.957	23.000	0.417	1.000	N	NA
4587673	4587674	YPE_1329	YPE_1330	ripA	fimZ	FALSE	0.006	826.000	0.000	1.000	N	NA
4587674	4587675	YPE_1330	YPE_1332	fimZ		FALSE	0.282	98.000	0.000	NA		NA
4587675	4587677	YPE_1332	YPE_1333			FALSE	0.021	513.000	0.000	NA		NA
4587677	4587678	YPE_1333	YPE_1334			TRUE	0.871	93.000	0.154	1.000	Y	NA
4587678	4587679	YPE_1334	YPE_1335			TRUE	0.983	49.000	0.500	1.000	Y	NA
4587679	4587680	YPE_1335	YPE_1336			TRUE	0.988	16.000	0.667	NA		NA
4587680	4587681	YPE_1336	YPE_1337			TRUE	0.993	-3.000	0.333	NA		NA
4587681	4587682	YPE_1337	YPE_1338			FALSE	0.052	303.000	0.000	NA		NA
4587682	4587683	YPE_1338	YPE_1339			FALSE	0.213	162.000	0.000	NA		NA
4587684	4587685	YPE_1340	YPE_1341	ybtS	ybtX	TRUE	0.842	28.000	0.176	NA	N	NA
4587685	4587686	YPE_1341	YPE_1342	ybtX	ybtQ	TRUE	0.956	-7.000	0.130	NA	N	NA
4587686	4587687	YPE_1342	YPE_1343	ybtQ	ybtP	TRUE	1.000	-13.000	0.913	0.006	Y	NA
4587688	4587689	YPE_1344	YPE_1345	ybtA	irp2	TRUE	0.591	191.000	0.333	1.000	N	NA
4587689	4587690	YPE_1345	YPE_1346	irp2	irp1	TRUE	0.932	88.000	0.158	0.002	Y	NA
4587690	4587691	YPE_1346	YPE_1347	irp1	ybtU	TRUE	0.999	-3.000	0.333	0.020	Y	NA
4587691	4587692	YPE_1347	YPE_1348	ybtU	ybtT	TRUE	0.998	-3.000	0.406	1.000	Y	NA
4587692	4587693	YPE_1348	YPE_1349	ybtT	ybtE	TRUE	0.988	4.000	0.094	1.000	Y	NA
4587693	4587694	YPE_1349	YPE_1350	ybtE	fyuA	FALSE	0.378	131.000	0.125	1.000	N	NA
4587694	4587695	YPE_1350	YPE_1351	fyuA		FALSE	0.014	873.000	0.000	NA		NA
4587695	4587696	YPE_1351	YPE_1352			TRUE	0.837	8.000	0.000	NA		NA
4587696	4587697	YPE_1352	YPE_1353		hef	TRUE	0.526	44.000	0.000	NA		NA
4587697	4587698	YPE_1353	YPE_1354	hef		TRUE	0.727	19.000	0.000	NA		NA
4587698	4587699	YPE_1354	YPE_1355			TRUE	0.990	6.000	0.500	NA		NA
4587700	4587701	YPE_1356	YPE_1357			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4587702	4587703	YPE_1358	YPE_1359			FALSE	0.161	194.000	0.000	NA		NA
4587703	4587704	YPE_1359	YPE_1360			TRUE	0.752	16.000	0.000	NA		NA
4587705	4587706	YPE_1361	YPE_1362			TRUE	0.937	25.000	0.000	1.000	Y	NA
4587706	4587707	YPE_1362	YPE_1363			TRUE	0.992	-7.000	0.000	0.063	Y	NA
4587707	4587708	YPE_1363	YPE_1364			TRUE	0.872	67.000	0.000	0.063	Y	NA
4587708	4587709	YPE_1364	YPE_1365			TRUE	0.651	30.000	0.000	1.000		NA
4587711	4587712	YPE_1367	YPE_1368			FALSE	0.172	187.000	0.000	NA		NA
4587714	4587715	YPE_1369	YPE_1370			TRUE	0.800	12.000	0.000	NA		NA
4587716	4587718	YPE_1371	YPE_1373			FALSE	0.346	72.000	0.000	NA		NA
4587718	4587720	YPE_1373	YPE_1374			FALSE	0.385	66.000	0.000	NA		NA
4587721	4587722	YPE_1375	YPE_1376			TRUE	0.999	-3.000	1.000	NA		NA
4587722	4587723	YPE_1376	YPE_1377			TRUE	0.742	17.000	0.000	NA		NA
4587723	4587724	YPE_1377	YPE_1378			FALSE	0.026	435.000	0.000	NA		NA
4587724	4587725	YPE_1378	YPE_1379			TRUE	0.934	-3.000	0.000	NA		NA
4587725	4587726	YPE_1379	YPE_1380			TRUE	0.866	5.000	0.000	NA		NA
4587726	4587727	YPE_1380	YPE_1382			FALSE	0.209	165.000	0.000	NA		NA
4587727	4587729	YPE_1382	YPE_1383			FALSE	0.273	102.000	0.000	NA		NA
4587729	4587730	YPE_1383	YPE_1384		tnpA	TRUE	0.934	72.000	0.521	0.087		NA
4587730	4587731	YPE_1384	YPE_1385	tnpA		FALSE	0.119	220.000	0.000	NA		NA
4587732	4587733	YPE_1386	YPE_1388			FALSE	0.035	369.000	0.000	NA		NA
4587736	4587737	YPE_1390	YPE_1391			TRUE	0.811	11.000	0.000	NA		NA
4587737	4587738	YPE_1391	YPE_1392			TRUE	0.477	53.000	0.000	NA		NA
4587738	4587739	YPE_1392	YPE_1393		pgsA	FALSE	0.227	145.000	0.000	NA		NA
4587739	4587740	YPE_1393	YPE_1394	pgsA	uvrC	TRUE	0.772	59.000	0.227	1.000	N	NA
4587740	4587741	YPE_1394	YPE_1395	uvrC	uvrY	TRUE	0.967	-7.000	0.086	0.031	N	NA
4587742	4587743	YPE_1396	YPE_1397			FALSE	0.393	128.000	0.085	NA		NA
4587746	4587747	YPE_1400	YPE_1401	ail3		FALSE	0.016	687.000	0.000	NA		NA
4587751	4587752	YPE_1405	YPE_1406			TRUE	0.994	11.000	0.378	NA	Y	NA
4587752	4587753	YPE_1406	YPE_1407			TRUE	0.985	30.000	0.356	NA	Y	NA
4587753	4587754	YPE_1407	YPE_1408		putP	FALSE	0.017	333.000	0.000	1.000	N	NA
4587754	4587755	YPE_1408	YPE_1409	putP		TRUE	0.633	30.000	0.000	NA		NA
4587756	4587757	YPE_1410	YPE_1411	putA		FALSE	0.024	464.000	0.000	NA		NA
4587757	4587758	YPE_1411	YPE_1412			TRUE	0.692	34.000	0.061	NA		NA
4587759	4587760	YPE_1413	YPE_1414			TRUE	0.996	3.000	0.150	0.004	Y	NA
4587760	4587761	YPE_1414	YPE_1415		fliY	TRUE	0.995	0.000	0.100	0.078	Y	NA
4587761	4587762	YPE_1415	YPE_1416	fliY	dcyD	TRUE	0.948	124.000	0.469	1.000	Y	NA
4587762	4587763	YPE_1416	YPE_1417	dcyD	fliZ	FALSE	0.092	289.000	0.062	1.000		NA
4587763	4587764	YPE_1417	YPE_1418	fliZ	fliA	FALSE	0.256	222.000	0.108	1.000		NA
4587764	4587765	YPE_1418	YPE_1419	fliA	fliC	FALSE	0.016	347.000	0.000	1.000	N	NA
4587766	4587767	YPE_1420	YPE_1421	fliD	fliS	TRUE	0.996	11.000	0.284	0.004	Y	NA
4587767	4587768	YPE_1421	YPE_1422	fliS	fliT	TRUE	0.977	11.000	0.324	1.000		NA
4587768	4587769	YPE_1422	YPE_1423	fliT		TRUE	0.464	55.000	0.000	NA		NA
4587769	4587770	YPE_1423	YPE_1424			TRUE	0.844	7.000	0.000	NA		NA
4587770	4587771	YPE_1424	YPE_1426			FALSE	0.038	354.000	0.000	NA		NA
4587771	4587773	YPE_1426	YPE_1427			FALSE	0.214	161.000	0.000	NA		NA
4587774	4587775	YPE_1428	YPE_1429			TRUE	0.759	11.000	0.013	NA		NA
4587775	4587776	YPE_1429	YPE_1430		fliE	FALSE	0.056	294.000	0.000	NA		NA
4587777	4587778	YPE_1431	YPE_1432	fliF	fliG	TRUE	0.998	-3.000	0.220	0.010	Y	NA
4587778	4587779	YPE_1432	YPE_1433	fliG	fliH	TRUE	0.992	-7.000	0.007	0.006	Y	NA
4587779	4587780	YPE_1433	YPE_1434	fliH	fliI	TRUE	0.995	-37.000	0.115	0.006	Y	NA
4587780	4587781	YPE_1434	YPE_1435	fliI	fliJ	TRUE	0.862	100.000	0.073	0.013	Y	NA
4587781	4587782	YPE_1435	YPE_1436	fliJ	fliK	TRUE	0.999	-3.000	0.317	0.010	Y	NA
4587782	4587783	YPE_1436	YPE_1437	fliK	fliL	TRUE	0.487	267.000	0.119	1.000	Y	NA
4587783	4587784	YPE_1437	YPE_1438	fliL	fliM	TRUE	0.999	6.000	0.957	0.002	Y	NA
4587784	4587785	YPE_1438	YPE_1439	fliM	fliN	TRUE	0.998	-3.000	0.137	0.002	Y	NA
4587785	4587786	YPE_1439	YPE_1440	fliN	fliO	TRUE	0.929	168.000	0.443	1.000	Y	NA
4587786	4587787	YPE_1440	YPE_1441	fliO	fliP	TRUE	0.997	-3.000	0.203	1.000	Y	NA
4587787	4587788	YPE_1441	YPE_1442	fliP	fliQ	TRUE	0.987	106.000	0.827	0.013	Y	NA
4587788	4587789	YPE_1442	YPE_1443	fliQ	fliR	TRUE	0.994	3.000	0.069	0.003	Y	NA
4587789	4587790	YPE_1443	YPE_1444	fliR		TRUE	0.944	21.000	0.000	NA	Y	NA
4587790	4587791	YPE_1444	YPE_1445			TRUE	0.520	45.000	0.000	NA		NA
4587792	4587793	YPE_1446	YPE_1447			TRUE	0.873	49.000	0.000	NA	Y	NA
4587793	4587794	YPE_1447	YPE_1448			TRUE	0.951	96.000	0.286	0.014	Y	NA
4587794	4587795	YPE_1448	YPE_1449			TRUE	0.813	66.000	0.000	NA	Y	NA
4587795	4587796	YPE_1449	YPE_1450			TRUE	0.995	43.000	1.000	NA	Y	NA
4587796	4587797	YPE_1450	YPE_1451			FALSE	0.240	148.000	0.000	1.000		NA
4587799	4587800	YPE_1453	YPE_1454	flgL	flgK	TRUE	0.897	139.000	0.142	0.002	Y	NA
4587800	4587801	YPE_1454	YPE_1455	flgK	flgJ	TRUE	0.717	871.000	0.705	0.004	Y	NA
4587801	4587802	YPE_1455	YPE_1456	flgJ	flgI	TRUE	0.994	0.000	0.048	0.013	Y	NA
4587802	4587803	YPE_1456	YPE_1457	flgI	flgH	TRUE	0.983	15.000	0.085	0.013	Y	NA
4587803	4587804	YPE_1457	YPE_1458	flgH	flgG	TRUE	0.893	144.000	0.268	1.000	Y	NA
4587804	4587805	YPE_1458	YPE_1459	flgG	flgF	TRUE	0.999	-19.000	0.420	0.001	Y	NA
4587805	4587806	YPE_1459	YPE_1460	flgF	flgE	TRUE	0.979	22.000	0.095	0.007	Y	NA
4587806	4587807	YPE_1460	YPE_1461	flgE	flgD	TRUE	0.542	202.000	0.000	NA	Y	NA
4587807	4587808	YPE_1461	YPE_1462	flgD	flgC	TRUE	0.984	15.000	0.186	NA	Y	NA
4587808	4587809	YPE_1462	YPE_1463	flgC	flgB	TRUE	0.999	6.000	0.824	0.006	Y	NA
4587810	4587811	YPE_1464	YPE_1465	flgA	flgM	TRUE	0.908	151.000	0.330	NA	Y	NA
4587811	4587812	YPE_1465	YPE_1466	flgM	flgN	TRUE	0.995	19.000	0.361	0.003	Y	NA
4587813	4587814	YPE_1467	YPE_1469	tnp	flhE	FALSE	0.014	1658.000	0.000	1.000		NA
4587814	4587815	YPE_1469	YPE_1470	flhE	flhA	TRUE	0.978	0.000	0.053	0.003		NA
4587815	4587816	YPE_1470	YPE_1471	flhA	flhB	TRUE	0.998	0.000	0.287	0.013	Y	NA
4587817	4587818	YPE_1472	YPE_1473			TRUE	0.998	-6.000	0.800	NA		NA
4587821	4587822	YPE_1476	YPE_1477	ryeB		FALSE	0.213	162.000	0.000	NA		NA
4587822	4587823	YPE_1477	YPE_1478			TRUE	0.930	82.000	0.704	NA		NA
4587823	4587824	YPE_1478	YPE_1479			TRUE	0.995	3.000	0.613	1.000		NA
4587824	4587825	YPE_1479	YPE_1480		ftn	FALSE	0.032	388.000	0.029	1.000		NA
4587827	4587828	YPE_1482	YPE_1483	pip	ptrB	FALSE	0.038	722.000	0.000	0.023		NA
4587828	4587829	YPE_1483	YPE_1484	ptrB		FALSE	0.050	310.000	0.000	NA		NA
4587829	4587830	YPE_1484	YPE_1485			FALSE	0.342	92.000	0.048	NA		NA
4587830	4587831	YPE_1485	YPE_1486			TRUE	0.623	40.000	0.053	NA		NA
4587831	4587832	YPE_1486	YPE_1487		dbpA	FALSE	0.234	94.000	0.014	NA		NA
4587835	4587836	YPE_1490	YPE_1491			TRUE	0.975	-3.000	0.116	1.000		NA
4587836	4587837	YPE_1491	YPE_1492			FALSE	0.174	708.000	0.409	1.000		NA
4587838	4587839	YPE_1493	YPE_1494	hpaC	hpaB	TRUE	0.971	21.000	0.226	0.001		NA
4587839	4587840	YPE_1494	YPE_1495	hpaB	hpaX	FALSE	0.187	68.000	0.000	1.000	N	NA
4587840	4587841	YPE_1495	YPE_1496	hpaX	hpaI	TRUE	0.973	26.000	0.175	1.000	Y	NA
4587841	4587842	YPE_1496	YPE_1497	hpaI	hpaH	TRUE	0.978	11.000	0.439	1.000	N	NA
4587842	4587843	YPE_1497	YPE_1498	hpaH	hpaF	TRUE	0.986	-6.000	0.282	1.000	N	NA
4587843	4587844	YPE_1498	YPE_1499	hpaF	hpaD	TRUE	0.954	25.000	0.330	1.000		NA
4587844	4587845	YPE_1499	YPE_1500	hpaD	hpaE	TRUE	0.804	119.000	0.378	1.000		NA
4587845	4587846	YPE_1500	YPE_1502	hpaE	hpaG	TRUE	0.934	-3.000	0.000	NA		NA
4587850	4587851	YPE_1506	YPE_1507	manX	manY	TRUE	0.871	92.000	0.064	0.008	Y	NA
4587851	4587852	YPE_1507	YPE_1508	manY	manZ	TRUE	0.999	7.000	0.939	0.008	Y	NA
4587852	4587853	YPE_1508	YPE_1509	manZ		TRUE	0.854	200.000	0.755	NA		NA
4587853	4587854	YPE_1509	YPE_1510			FALSE	0.027	429.000	0.000	NA		NA
4587856	4587857	YPE_1512	YPE_1513			FALSE	0.115	222.000	0.000	NA		NA
4587860	4587861	YPE_1516	YPE_1517			TRUE	0.901	43.000	0.286	NA		NA
4587863	4587864	YPE_1519	YPE_1520			TRUE	0.594	237.000	0.429	NA		NA
4587864	4587865	YPE_1520	YPE_1521			TRUE	0.939	43.000	0.429	NA		NA
4587865	4587866	YPE_1521	YPE_1522			FALSE	0.184	263.000	0.125	NA		NA
4587871	4587872	YPE_1527	YPE_1528			FALSE	0.085	103.000	0.021	1.000	N	NA
4587872	4587873	YPE_1528	YPE_1529			FALSE	0.097	237.000	0.000	NA		NA
4587873	4587874	YPE_1529	YPE_1530			FALSE	0.031	390.000	0.000	NA		NA
4587874	4587875	YPE_1530	YPE_1531			FALSE	0.189	178.000	0.000	NA		NA
4587876	4587878	YPE_1532	YPE_1533			FALSE	0.346	72.000	0.000	NA		NA
4587878	4587879	YPE_1533	YPE_1534			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4587881	4587882	YPE_1537	YPE_1538	kduI	kduD	TRUE	0.588	92.000	0.192	1.000	N	NA
4587882	4587883	YPE_1538	YPE_1539	kduD	kdgC	FALSE	0.046	336.000	0.000	1.000		NA
4587883	4587884	YPE_1539	YPE_1540	kdgC		TRUE	0.875	41.000	0.217	1.000		NA
4587884	4587885	YPE_1540	YPE_1541			TRUE	1.000	-7.000	0.917	0.062	Y	NA
4587885	4587886	YPE_1541	YPE_1542			TRUE	0.987	14.000	0.131	0.062	Y	NA
4587886	4587887	YPE_1542	YPE_1543			TRUE	0.982	16.000	0.101	0.062	Y	NA
4587887	4587888	YPE_1543	YPE_1544			FALSE	0.120	298.000	0.000	0.062		NA
4587888	4587889	YPE_1544	YPE_1545		ydjM	FALSE	0.022	480.000	0.000	NA		NA
4587889	4587890	YPE_1545	YPE_1546	ydjM	ydjN	FALSE	0.278	204.000	0.102	NA		NA
4587891	4587892	YPE_1547	YPE_1548		kdgR	FALSE	0.013	385.000	0.000	1.000	N	NA
4587892	4587893	YPE_1548	YPE_1549	kdgR	ogl	FALSE	0.135	187.000	0.059	1.000	N	NA
4587895	4587896	YPE_1551	YPE_1552			TRUE	0.996	-3.000	0.167	1.000	Y	NA
4587896	4587897	YPE_1552	YPE_1553			TRUE	0.996	-3.000	0.167	1.000	Y	NA
4587897	4587898	YPE_1553	YPE_1554			TRUE	0.981	82.000	0.750	1.000	Y	NA
4587898	4587899	YPE_1554	YPE_1555			TRUE	0.969	153.000	0.750	1.000	Y	NA
4587899	4587900	YPE_1555	YPE_1556			FALSE	0.007	658.000	0.000	1.000	N	NA
4587900	4587901	YPE_1556	YPE_1557		prc	FALSE	0.037	474.000	0.042	0.023	N	NA
4587901	4587902	YPE_1557	YPE_1558	prc	proQ	TRUE	0.939	20.000	0.304	NA	N	NA
4587902	4587903	YPE_1558	YPE_1559	proQ		TRUE	0.798	96.000	0.081	NA	Y	NA
4587904	4587905	YPE_1560	YPE_1561			TRUE	0.997	-31.000	0.840	NA		NA
4587905	4587906	YPE_1561	YPE_1562			FALSE	0.023	479.000	0.000	NA		NA
4587906	4587907	YPE_1562	YPE_1563			TRUE	0.966	6.000	0.192	NA		NA
4587907	4587908	YPE_1563	YPE_1564			TRUE	0.987	21.000	0.714	NA		NA
4587908	4587909	YPE_1564	YPE_1565			TRUE	0.904	31.000	0.219	NA		NA
4587909	4587910	YPE_1565	YPE_1566			TRUE	0.973	171.000	0.879	NA	Y	NA
4587910	4587911	YPE_1566	YPE_1567			TRUE	0.865	206.000	0.848	NA		NA
4587911	4587912	YPE_1567	YPE_1568			FALSE	0.133	208.000	0.000	NA		NA
4587915	4587916	YPE_1571	YPE_1572			FALSE	0.219	155.000	0.000	NA		NA
4587916	4587917	YPE_1572	YPE_1573			FALSE	0.031	393.000	0.000	NA		NA
4587919	4587920	YPE_1575	YPE_1576			FALSE	0.277	100.000	0.000	NA		NA
4587920	4587922	YPE_1576	YPE_1578			FALSE	0.037	357.000	0.000	NA		NA
4587924	4587925	YPE_1580	YPE_1581	cheZ	cheY	TRUE	0.994	10.000	0.333	1.000	Y	NA
4587925	4587926	YPE_1581	YPE_1582	cheY	cheB	TRUE	0.951	101.000	0.286	0.010	Y	NA
4587926	4587927	YPE_1582	YPE_1583	cheB	cheR	TRUE	0.992	0.000	0.087	1.000	Y	NA
4587927	4587928	YPE_1583	YPE_1585	cheR	tar	FALSE	0.084	1967.000	0.000	1.000	Y	NA
4587928	4587929	YPE_1585	YPE_1586	tar		FALSE	0.094	241.000	0.000	NA		NA
4587929	4587930	YPE_1586	YPE_1587			FALSE	0.361	69.000	0.000	NA		NA
4587930	4587931	YPE_1587	YPE_1588			FALSE	0.020	528.000	0.000	NA		NA
4587931	4587932	YPE_1588	YPE_1589			FALSE	0.023	475.000	0.000	NA		NA
4587933	4587934	YPE_1590	YPE_1591	sgaU		TRUE	0.992	-3.000	0.400	NA	N	NA
4587934	4587935	YPE_1591	YPE_1592			TRUE	0.970	13.000	0.400	NA	N	NA
4587936	4587937	YPE_1593	YPE_1594	cheW	cheA	TRUE	0.960	163.000	0.447	0.003	Y	NA
4587937	4587938	YPE_1594	YPE_1595	cheA	motB	TRUE	0.998	11.000	0.913	1.000	Y	NA
4587938	4587939	YPE_1595	YPE_1596	motB	motA	TRUE	0.999	-3.000	0.429	1.000	Y	NA
4587939	4587940	YPE_1596	YPE_1597	motA	flhC	TRUE	0.679	205.000	0.408	1.000		NA
4587940	4587941	YPE_1597	YPE_1599	flhC	mgtB	FALSE	0.014	1543.000	0.000	1.000		NA
4587941	4587942	YPE_1599	YPE_1600	mgtB	mgtC	FALSE	0.049	401.000	0.065	1.000		NA
4587942	4587943	YPE_1600	YPE_1601	mgtC		FALSE	0.042	340.000	0.000	NA		NA
4587946	4587947	YPE_1604	YPE_1605			FALSE	0.256	215.000	0.105	NA		NA
4587948	4587949	YPE_1606	YPE_1607	lacZ		FALSE	0.012	407.000	0.000	1.000	N	NA
4587949	4587950	YPE_1607	YPE_1608			FALSE	0.062	283.000	0.000	NA		NA
4587950	4587951	YPE_1608	YPE_1609			FALSE	0.022	491.000	0.000	NA		NA
4587951	4587952	YPE_1609	YPE_1610			FALSE	0.336	89.000	0.045	NA		NA
4587952	4587953	YPE_1610	YPE_1611			FALSE	0.058	291.000	0.000	NA		NA
4587954	4587955	YPE_1612	YPE_1614			FALSE	0.053	301.000	0.000	NA		NA
4587955	4587957	YPE_1614	YPE_1615			TRUE	0.601	34.000	0.000	NA		NA
4587958	4587959	YPE_1616	YPE_1617			FALSE	0.006	920.000	0.000	1.000	N	NA
4587959	4587960	YPE_1617	YPE_1618			TRUE	0.501	120.000	0.125	NA		NA
4587960	4587961	YPE_1618	YPE_1619			FALSE	0.064	276.000	0.000	NA		NA
4587963	4587964	YPE_1621	YPE_1622			TRUE	0.973	-7.000	0.182	1.000	N	NA
4587964	4587965	YPE_1622	YPE_1623			FALSE	0.354	187.000	0.158	1.000	N	NA
4587965	4587966	YPE_1623	YPE_1624			TRUE	0.783	58.000	0.180	NA		NA
4587966	4587967	YPE_1624	YPE_1625		purB	TRUE	0.613	61.000	0.093	NA		NA
4587967	4587968	YPE_1625	YPE_1626	purB		FALSE	0.129	188.000	0.002	1.000		NA
4587968	4587969	YPE_1626	YPE_1627		phoP	FALSE	0.139	211.000	0.000	1.000		NA
4587969	4587970	YPE_1627	YPE_1628	phoP	phoQ	TRUE	0.999	6.000	0.940	1.000	Y	NA
4587970	4587971	YPE_1628	YPE_1629	phoQ		TRUE	0.851	84.000	0.408	NA		NA
4587972	4587973	YPE_1630	YPE_1631	pepT		FALSE	0.011	330.000	0.019	1.000	N	NA
4587973	4587974	YPE_1631	YPE_4354		nagK	TRUE	0.498	49.000	0.000	NA		NA
4587974	4587976	YPE_4354	YPE_1633	nagK	lolE	TRUE	0.727	19.000	0.000	NA		NA
4587976	4587977	YPE_1633	YPE_1634	lolE	lolD	TRUE	0.979	-3.000	0.125	0.077	N	NA
4587977	4587978	YPE_1634	YPE_1635	lolD	lolC	TRUE	0.982	-7.000	0.175	0.077	N	NA
4587981	4587982	YPE_1638	YPE_1639			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4587983	4587984	YPE_1640	YPE_1641		moeB	FALSE	0.108	136.000	0.000	1.000	N	NA
4587984	4587985	YPE_1641	YPE_1642	moeB	moeA	TRUE	0.998	5.000	0.323	0.003	Y	NA
4587985	4587986	YPE_1642	YPE_1643	moeA		FALSE	0.021	535.000	0.000	1.000		NA
4587986	4587987	YPE_1643	YPE_1644			TRUE	0.914	10.000	0.094	1.000		NA
4587987	4587988	YPE_1644	YPE_1645			TRUE	0.930	2.000	0.094	1.000	N	NA
4587988	4587989	YPE_1645	YPE_1646			TRUE	0.994	2.000	0.500	NA		NA
4587989	4587990	YPE_1646	YPE_1647			FALSE	0.309	84.000	0.000	NA		NA
4587990	4587991	YPE_1647	YPE_1648			FALSE	0.075	257.000	0.000	NA		NA
4587991	4587992	YPE_1648	YPE_1649		frmA	TRUE	0.950	21.000	0.273	1.000		NA
4587992	4587993	YPE_1649	YPE_1650	frmA		TRUE	0.553	280.000	0.636	1.000	N	NA
4587994	4587995	YPE_1651	YPE_1652		folE	TRUE	0.598	184.000	0.250	NA		NA
4587995	4587996	YPE_1652	YPE_1653	folE		TRUE	0.963	55.000	0.719	NA		NA
4587996	4587997	YPE_1653	YPE_1654		mglB	FALSE	0.015	748.000	0.000	NA		NA
4587997	4587998	YPE_1654	YPE_1655	mglB	mglA	TRUE	0.748	230.000	0.250	NA	Y	NA
4587998	4587999	YPE_1655	YPE_1656	mglA	mglC	TRUE	0.998	21.000	0.905	0.013	Y	NA
4588000	4588001	YPE_1657	YPE_1658		sfcA	FALSE	0.072	281.000	0.045	NA		NA
4588001	4588002	YPE_1658	YPE_1659	sfcA	cdd	FALSE	0.010	356.000	0.022	1.000	N	NA
4588002	4588003	YPE_1659	YPE_1660	cdd		FALSE	0.142	326.000	0.198	1.000	N	NA
4588003	4588004	YPE_1660	YPE_1661			TRUE	0.993	-3.000	0.340	1.000		NA
4588004	4588005	YPE_1661	YPE_1662		ydeF	FALSE	0.167	242.000	0.021	0.074		NA
4588005	4588006	YPE_1662	YPE_1663	ydeF		FALSE	0.043	333.000	0.000	NA		NA
4588006	4588007	YPE_1663	YPE_1664			TRUE	0.935	15.000	0.177	NA		NA
4588009	4588010	YPE_1666	YPE_1667			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4588013	4588014	YPE_1670	YPE_1671		udk	FALSE	0.087	245.000	0.073	1.000	N	NA
4588014	4588015	YPE_1671	YPE_1672	udk	dcd	TRUE	0.807	105.000	0.098	1.000	Y	NA
4588015	4588016	YPE_1672	YPE_1673	dcd		FALSE	0.121	187.000	0.057	NA	N	NA
4588018	4588019	YPE_1675	YPE_1676			FALSE	0.223	152.000	0.000	NA		NA
4588019	4588020	YPE_1676	YPE_1677		alcA	TRUE	0.966	35.000	0.667	1.000	N	NA
4588020	4588021	YPE_1677	YPE_1678	alcA	alcB	TRUE	0.801	0.000	0.000	NA	N	NA
4588021	4588022	YPE_1678	YPE_1679	alcB		TRUE	0.823	-3.000	0.000	NA	N	NA
4588023	4588024	YPE_1680	YPE_1681	ysuD		TRUE	0.999	-3.000	0.583	1.000	Y	NA
4588024	4588025	YPE_1681	YPE_1682		ysuB	TRUE	0.999	-13.000	0.818	0.061	Y	NA
4588025	4588026	YPE_1682	YPE_1683	ysuB		TRUE	0.999	-3.000	0.455	1.000	Y	NA
4588026	4588027	YPE_1683	YPE_1684			TRUE	0.945	90.000	0.364	1.000	Y	NA
4588027	4588028	YPE_1684	YPE_1685			TRUE	0.755	213.000	0.455	0.002	N	NA
4588029	4588030	YPE_1686	YPE_1687	galU	galF	TRUE	0.918	84.000	0.111	0.001	Y	NA
4588030	4588031	YPE_1687	YPE_1688	galF	gnd	FALSE	0.013	386.000	0.000	1.000	N	NA
4588032	4588033	YPE_1689	YPE_1690	hisI	hisF	TRUE	0.999	-6.000	0.430	0.003	Y	NA
4588033	4588034	YPE_1690	YPE_1691	hisF	hisA	TRUE	0.999	-18.000	0.433	0.003	Y	NA
4588034	4588035	YPE_1691	YPE_1692	hisA	hisH	TRUE	0.996	6.000	0.210	0.003	Y	NA
4588035	4588036	YPE_1692	YPE_1693	hisH	hisB	TRUE	0.997	0.000	0.128	0.003	Y	NA
4588036	4588037	YPE_1693	YPE_1694	hisB	hisC	TRUE	0.999	-3.000	0.341	0.003	Y	NA
4588037	4588038	YPE_1694	YPE_1695	hisC	hisD	TRUE	0.998	3.000	0.294	0.003	Y	NA
4588038	4588039	YPE_1695	YPE_1696	hisD	hisG	TRUE	0.996	4.000	0.171	0.003	Y	NA
4588040	4588041	YPE_1697	YPE_1698			FALSE	0.031	392.000	0.000	NA		NA
4588042	4588043	YPE_1699	YPE_1700			FALSE	0.088	245.000	0.000	NA		NA
4588043	4588044	YPE_1700	YPE_1701			TRUE	0.934	-3.000	0.000	NA		NA
4588046	4588047	YPE_1703	YPE_1704		yeeF	FALSE	0.010	460.000	0.000	1.000	N	NA
11431540	4588040		YPE_1697			FALSE	NA	8308.000	0.000	NA		NA
11573903	4588040		YPE_1697			FALSE	NA	8308.000	0.000	NA		NA
11716295	4588040		YPE_1697			FALSE	NA	8308.000	0.000	NA		NA
11431541	4588040		YPE_1697			FALSE	NA	8336.000	0.000	NA		NA
11573904	4588040		YPE_1697			FALSE	NA	8336.000	0.000	NA		NA
11716296	4588040		YPE_1697			FALSE	NA	8336.000	0.000	NA		NA
11431542	4588040		YPE_1697			FALSE	NA	8368.000	0.000	NA		NA
11573905	4588040		YPE_1697			FALSE	NA	8368.000	0.000	NA		NA
11716297	4588040		YPE_1697			FALSE	NA	8368.000	0.000	NA		NA
11431543	4588040		YPE_1697			FALSE	NA	8396.000	0.000	NA		NA
11573906	4588040		YPE_1697			FALSE	NA	8396.000	0.000	NA		NA
11716298	4588040		YPE_1697			FALSE	NA	8396.000	0.000	NA		NA
11431544	4588040		YPE_1697			FALSE	NA	8428.000	0.000	NA		NA
11573907	4588040		YPE_1697			FALSE	NA	8428.000	0.000	NA		NA
11716299	4588040		YPE_1697			FALSE	NA	8428.000	0.000	NA		NA
11431545	4588040		YPE_1697			FALSE	NA	8456.000	0.000	NA		NA
11573908	4588040		YPE_1697			FALSE	NA	8456.000	0.000	NA		NA
11716300	4588040		YPE_1697			FALSE	NA	8456.000	0.000	NA		NA
11431546	4588040		YPE_1697			FALSE	NA	8488.000	0.000	NA		NA
11573909	4588040		YPE_1697			FALSE	NA	8488.000	0.000	NA		NA
11716301	4588040		YPE_1697			FALSE	NA	8488.000	0.000	NA		NA
4588049	4588050	YPE_1706	YPE_1707			FALSE	0.026	434.000	0.000	NA		NA
4588053	4588054	YPE_1709	YPE_1711			FALSE	0.005	4044.000	0.000	1.000	N	NA
4588056	4588057	YPE_1713	YPE_1714			TRUE	0.983	48.000	0.333	0.044	Y	NA
4588057	4588058	YPE_1714	YPE_1715			TRUE	0.780	107.000	0.290	0.044	N	NA
4588058	4588059	YPE_1715	YPE_1716			FALSE	0.321	79.000	0.000	NA		NA
4588059	4588060	YPE_1716	YPE_1717		lldD	TRUE	0.520	45.000	0.000	NA		NA
4588063	4588064	YPE_1720	YPE_1721			TRUE	0.753	36.000	0.136	1.000	N	NA
4588065	4588066	YPE_1722	YPE_1723			FALSE	0.257	117.000	0.000	NA		NA
4588067	4588068	YPE_1724	YPE_1725			FALSE	0.025	446.000	0.000	NA		NA
4588068	4588069	YPE_1725	YPE_1726			FALSE	0.031	258.000	0.000	1.000	N	NA
4588069	4588070	YPE_1726	YPE_1727			TRUE	0.997	20.000	0.905	NA	Y	NA
4588070	4588071	YPE_1727	YPE_1728			TRUE	0.981	124.000	0.947	NA	Y	NA
4588078	4588079	YPE_1735	YPE_1736	dinI	pyrC	FALSE	0.046	313.000	0.031	NA		NA
4588081	4588082	YPE_1738	YPE_1739		rne	FALSE	0.136	96.000	0.000	1.000	N	NA
4588083	4588084	YPE_1740	YPE_1741	rluC	tnp	FALSE	0.050	220.000	0.000	1.000	N	NA
4588086	4588087	YPE_1743	YPE_1744	yceD	rpmF	TRUE	0.988	13.000	0.599	NA		NA
4588087	4588088	YPE_1744	YPE_1745	rpmF		TRUE	0.937	34.000	0.418	1.000	N	NA
4588088	4588089	YPE_1745	YPE_1746		fabH	TRUE	0.998	7.000	0.380	0.003	Y	NA
4588089	4588090	YPE_1746	YPE_1747	fabH	fabD	TRUE	0.978	38.000	0.182	0.003	Y	NA
4588090	4588091	YPE_1747	YPE_1748	fabD	fabG	TRUE	0.997	14.000	0.432	0.003	Y	NA
4588091	4588092	YPE_1748	YPE_1749	fabG	acpP	TRUE	0.946	154.000	0.321	0.003	Y	NA
4588092	4588093	YPE_1749	YPE_1750	acpP	fabF	TRUE	0.940	95.000	0.346	1.000	Y	NA
4588093	4588094	YPE_1750	YPE_1751	fabF	tnp	FALSE	0.065	200.000	0.000	1.000	N	NA
4588094	4588095	YPE_1751	YPE_1752	tnp	pabC	FALSE	0.011	416.000	0.000	1.000	N	NA
4588095	4588096	YPE_1752	YPE_1753	pabC	yceG	FALSE	0.252	289.000	0.204	1.000		NA
4588096	4588097	YPE_1753	YPE_1754	yceG	tmk	TRUE	0.992	-10.000	0.209	0.001		NA
4588097	4588098	YPE_1754	YPE_1755	tmk	holB	TRUE	0.979	0.000	0.211	1.000	N	NA
4588098	4588099	YPE_1755	YPE_1756	holB		TRUE	0.975	15.000	0.110	NA	Y	NA
4588099	4588100	YPE_1756	YPE_1757		ptsG	FALSE	0.005	306.000	0.004	NA	N	NA
4588100	4588101	YPE_1757	YPE_1758	ptsG	tnp	FALSE	0.073	190.000	0.000	1.000	N	NA
4588101	4588102	YPE_1758	YPE_1759	tnp		FALSE	0.013	383.000	0.000	1.000	N	NA
4588102	4588103	YPE_1759	YPE_1760			FALSE	0.031	174.000	0.003	1.000	N	NA
4588103	4588104	YPE_1760	YPE_1761			TRUE	0.654	35.000	0.051	NA		NA
4588104	4588105	YPE_1761	YPE_1762			TRUE	0.955	41.000	0.516	NA		NA
4588105	4588106	YPE_1762	YPE_1763		thiK	TRUE	0.913	41.000	0.310	NA		NA
4588106	4588107	YPE_1763	YPE_1764	thiK		FALSE	0.331	71.000	0.069	1.000	N	NA
4588107	4588108	YPE_1764	YPE_1765			TRUE	0.409	128.000	0.091	NA		NA
4588108	4588109	YPE_1765	YPE_1766		ndh	FALSE	0.048	375.000	0.057	NA		NA
4588109	4588110	YPE_1766	YPE_1767	ndh		FALSE	0.201	171.000	0.000	NA		NA
4588110	4588111	YPE_1767	YPE_1768			FALSE	0.197	173.000	0.000	NA		NA
4588111	4588112	YPE_1768	YPE_1769			TRUE	0.837	8.000	0.000	NA		NA
4588112	4588113	YPE_1769	YPE_1770			FALSE	0.287	96.000	0.000	NA		NA
4588114	4588115	YPE_1771	YPE_1772			FALSE	0.107	228.000	0.000	NA		NA
4588117	4588118	YPE_1774	YPE_1775			TRUE	0.676	25.000	0.000	NA		NA
4588118	4588119	YPE_1775	YPE_1776			TRUE	0.924	0.000	0.000	NA		NA
4588119	4588120	YPE_1776	YPE_1777			TRUE	0.950	68.000	0.750	NA		NA
4588120	4588121	YPE_1777	YPE_1778			TRUE	0.996	-36.000	0.750	NA		NA
4588121	4588122	YPE_1778	YPE_1779			FALSE	0.117	221.000	0.000	NA		NA
4588122	4588123	YPE_1779	YPE_1780			TRUE	0.990	0.000	0.286	NA		NA
4588123	4588124	YPE_1780	YPE_1781			TRUE	0.918	-9.000	0.040	NA		NA
4588124	4588125	YPE_1781	YPE_1782			TRUE	0.754	44.000	0.120	NA		NA
4588125	4588126	YPE_1782	YPE_1783			TRUE	0.997	-3.000	0.625	NA		NA
4588126	4588127	YPE_1783	YPE_1784			FALSE	0.013	2276.000	0.000	NA		NA
4588127	4588128	YPE_1784	YPE_1785			TRUE	0.806	173.000	0.500	NA		NA
4588128	4588129	YPE_1785	YPE_1786			TRUE	0.752	16.000	0.000	NA		NA
4588129	4588130	YPE_1786	YPE_1787			FALSE	0.221	154.000	0.000	NA		NA
4588130	4588131	YPE_1787	YPE_1788			TRUE	0.934	-3.000	0.000	NA		NA
4588131	4588132	YPE_1788	YPE_1789			TRUE	0.974	16.000	0.400	NA		NA
4588132	4588133	YPE_1789	YPE_1790			TRUE	0.964	3.000	0.125	NA		NA
4588133	4588134	YPE_1790	YPE_1791			FALSE	0.059	388.000	0.083	NA		NA
4588134	4588135	YPE_1791	YPE_1792			TRUE	0.882	4.000	0.000	NA		NA
4588135	4588136	YPE_1792	YPE_1793			TRUE	0.924	0.000	0.000	NA		NA
4588136	4588137	YPE_1793	YPE_1794			TRUE	0.998	-3.000	0.750	NA		NA
4588137	4588138	YPE_1794	YPE_1795			TRUE	0.800	12.000	0.000	NA		NA
4588138	4588139	YPE_1795	YPE_1796			TRUE	0.533	43.000	0.000	NA		NA
4588139	4588140	YPE_1796	YPE_1797			FALSE	0.016	665.000	0.000	NA		NA
4588140	4588141	YPE_1797	YPE_1798			FALSE	0.218	157.000	0.000	NA		NA
4588141	4588142	YPE_1798	YPE_1799			FALSE	0.297	99.000	0.000	1.000		NA
4588142	4588143	YPE_1799	YPE_1800			TRUE	0.568	38.000	0.000	NA		NA
4588143	4588144	YPE_1800	YPE_1801			TRUE	0.560	39.000	0.000	NA		NA
4588144	4588145	YPE_1801	YPE_1802			TRUE	0.992	3.000	0.051	0.043	Y	NA
4588145	4588146	YPE_1802	YPE_1803			TRUE	0.996	-7.000	0.120	0.016	Y	NA
4588146	4588147	YPE_1803	YPE_1804			TRUE	0.993	-7.000	0.120	1.000	Y	NA
4588147	4588148	YPE_1804	YPE_1805			TRUE	0.991	16.000	0.333	1.000	Y	NA
4588148	4588149	YPE_1805	YPE_1806			TRUE	0.990	-7.000	0.056	1.000	Y	NA
4588149	4588150	YPE_1806	YPE_1807			TRUE	0.990	-10.000	0.083	NA	Y	NA
4588150	4588151	YPE_1807	YPE_1808			FALSE	0.044	330.000	0.000	NA		NA
4588152	4588153	YPE_1809	YPE_1810			FALSE	0.299	154.000	0.000	0.019	N	NA
4588157	4588158	YPE_1814	YPE_1815			TRUE	0.616	61.000	0.094	NA		NA
4588160	4588161	YPE_1817	YPE_1818		mgsA	FALSE	0.240	179.000	0.055	NA		NA
4588163	4588164	YPE_1820	YPE_1821			TRUE	0.784	30.000	0.090	NA		NA
4588166	4588167	YPE_1823	YPE_1824	sulA	ompA	FALSE	0.015	358.000	0.000	1.000	N	NA
4588167	4588168	YPE_1824	YPE_1825	ompA	tnp	FALSE	0.073	190.000	0.000	1.000	N	NA
4588170	4588171	YPE_1827	YPE_1828		fabA	TRUE	0.770	69.000	0.290	1.000	N	NA
4588173	4588175	YPE_1830N	YPE_1831			FALSE	0.304	87.000	0.000	NA		NA
4588175	4588176	YPE_1831	YPE_1832			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4588179	4588180	YPE_1833	YPE_1834			FALSE	0.041	341.000	0.000	NA		NA
4588180	4588181	YPE_1834	YPE_1835			FALSE	0.014	367.000	0.000	1.000	N	NA
4588181	4588182	YPE_1835	YPE_1836			TRUE	0.674	151.000	0.000	1.000	Y	NA
4588182	4588183	YPE_1836	YPE_1837			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4588183	4588184	YPE_1837	YPE_1838			TRUE	0.939	-3.000	0.000	1.000		NA
4588184	4588185	YPE_1838	YPE_1839			TRUE	0.990	-7.000	0.312	NA		NA
4588185	4588186	YPE_1839	YPE_1840			TRUE	0.976	-3.000	0.125	NA		NA
4588187	4588188	YPE_1841	YPE_1842	artM	artQ	TRUE	0.999	0.000	0.714	0.017	Y	NA
4588188	4588189	YPE_1842	YPE_1843	artQ	artI	TRUE	0.994	12.000	0.260	0.075	Y	NA
4588189	4588190	YPE_1843	YPE_1844	artI	artP	TRUE	0.988	21.000	0.323	1.000	Y	NA
4588190	4588191	YPE_1844	YPE_1845	artP		FALSE	0.298	295.000	0.000	1.000	Y	NA
4588191	4588192	YPE_1845	YPE_1846			FALSE	0.166	170.000	0.018	NA		NA
4588192	4588193	YPE_1846	YPE_1847			TRUE	0.660	78.000	0.167	NA		NA
4588193	4588194	YPE_1847	YPE_1848			TRUE	0.831	100.000	0.022	0.003	Y	NA
4588194	4588195	YPE_1848	YPE_1849		ltaA	TRUE	0.933	-3.000	0.074	1.000	N	NA
4588195	4588196	YPE_1849	YPE_1850	ltaA	poxB	FALSE	0.225	349.000	0.031	1.000	Y	NA
4588196	4588197	YPE_1850	YPE_1851	poxB	hcr	FALSE	0.059	144.000	0.017	1.000	N	NA
4588197	4588198	YPE_1851	YPE_1852	hcr	hcp	TRUE	0.862	114.000	0.085	0.011	Y	NA
4588198	4588199	YPE_1852	YPE_1853	hcp		FALSE	0.135	202.000	0.028	NA		NA
4588202	4588203	YPE_1856	YPE_1857		macB	TRUE	0.998	0.000	0.789	0.095	N	NA
4588205	4588206	YPE_1859	YPE_1860		clpA	TRUE	0.977	26.000	0.596	NA		NA
4588206	4588207	YPE_1860	YPE_1861	clpA	tnp	FALSE	0.023	293.000	0.000	1.000	N	NA
4588208	4588209	YPE_1862	YPE_1863	infA	aat	FALSE	0.060	166.000	0.020	1.000	N	NA
4588209	4588210	YPE_1863	YPE_1864	aat	cydC	TRUE	0.524	219.000	0.049	1.000	Y	NA
4588210	4588211	YPE_1864	YPE_1865	cydC	cydD	TRUE	0.999	3.000	0.631	0.005	Y	NA
4588211	4588212	YPE_1865	YPE_1866	cydD	trxB	FALSE	0.167	459.000	0.049	1.000	Y	NA
4588213	4588214	YPE_1867	YPE_1868	lrp	ftsK	TRUE	0.721	123.000	0.345	1.000	N	NA
4588214	4588215	YPE_1868	YPE_1869	ftsK	lolA	TRUE	0.552	193.000	0.305	1.000	N	NA
4588215	4588216	YPE_1869	YPE_1870	lolA		TRUE	0.924	11.000	0.167	1.000	N	NA
4588216	4588217	YPE_1870	YPE_1871		serS	FALSE	0.097	242.000	0.078	1.000	N	NA
4588217	4588218	YPE_1871	YPE_1872	serS		FALSE	0.027	271.000	0.000	1.000	N	NA
4588221	4588222	YPE_1875	YPE_1876	pflB	focA	TRUE	0.712	56.000	0.172	1.000	N	NA
4588222	4588223	YPE_1876	YPE_1877	focA		FALSE	0.016	697.000	0.000	NA		NA
4588224	4588225	YPE_1878	YPE_1879	ansB		FALSE	0.073	269.000	0.000	1.000		NA
4588225	4588226	YPE_1879	YPE_1880			TRUE	0.924	0.000	0.000	NA		NA
4588226	4588227	YPE_1880	YPE_1881		serC	FALSE	0.036	367.000	0.000	NA		NA
4588227	4588228	YPE_1881	YPE_1882	serC	aroA	TRUE	0.655	163.000	0.033	1.000	Y	NA
4588228	4588229	YPE_1882	YPE_1883	aroA	cmk	FALSE	0.160	313.000	0.209	1.000	N	NA
4588229	4588230	YPE_1883	YPE_1884	cmk	rpsA	TRUE	0.576	174.000	0.281	1.000	N	NA
4588230	4588231	YPE_1884	YPE_1885	rpsA	ihfB	TRUE	0.815	61.000	0.292	1.000	N	NA
4588231	4588232	YPE_1885	YPE_1886	ihfB		FALSE	0.014	547.000	0.003	1.000		NA
4588232	4588233	YPE_1886	YPE_1887		msbA	TRUE	0.829	36.000	0.075	0.072		NA
4588233	4588234	YPE_1887	YPE_1888	msbA	lpxK	TRUE	0.981	-3.000	0.205	1.000	N	NA
4588236	4588237	YPE_1890	YPE_1891	cspB		FALSE	0.013	548.000	0.004	NA		NA
4588237	4588238	YPE_1891	YPE_1892		kdsB	TRUE	0.990	-3.000	0.265	NA		NA
4588238	4588239	YPE_1892	YPE_1893	kdsB		FALSE	0.031	363.000	0.023	NA		NA
4588239	4588240	YPE_1893	YPE_1894		smtA	FALSE	0.015	773.000	0.000	NA		NA
4588240	4588241	YPE_1894	YPE_1895	smtA	mukF	TRUE	0.990	-3.000	0.325	NA	N	NA
4588241	4588242	YPE_1895	YPE_1896	mukF	mukE	TRUE	0.990	8.000	0.196	NA	Y	NA
4588242	4588243	YPE_1896	YPE_1897	mukE	mukB	TRUE	1.000	-3.000	0.786	0.001	Y	NA
4588243	4588244	YPE_1897	YPE_1898	mukB	tnp	FALSE	0.148	216.000	0.000	0.082	N	NA
4588244	4588245	YPE_1898	YPE_1899	tnp		FALSE	0.066	284.000	0.000	1.000		NA
4588245	4588246	YPE_1899	YPE_1900			TRUE	0.584	224.000	0.372	NA		NA
4588246	4588247	YPE_1900	YPE_1901			TRUE	0.607	61.000	0.089	NA		NA
4588248	4588249	YPE_1902	YPE_1903	aspC	ompF	FALSE	0.031	257.000	0.000	1.000	N	NA
4588249	4588250	YPE_1903	YPE_1904	ompF	asnS	FALSE	0.022	298.000	0.000	1.000	N	NA
4588250	4588251	YPE_1904	YPE_1905	asnS	pncB	FALSE	0.008	499.000	0.034	1.000	N	NA
4588252	4588253	YPE_1906	YPE_1907	pepN	pyrD	FALSE	0.003	618.000	0.014	1.000	N	NA
4588253	4588254	YPE_1907	YPE_1908	pyrD		FALSE	0.297	183.000	0.081	NA		NA
4588256	4588257	YPE_1910	YPE_1911		uup	TRUE	0.903	6.000	0.061	1.000		NA
4588257	4588258	YPE_1911	YPE_1912	uup	pqiA	FALSE	0.308	129.000	0.054	NA		NA
4588258	4588259	YPE_1912	YPE_1913	pqiA	pqiB	TRUE	0.992	14.000	0.819	NA		NA
4588259	4588260	YPE_1913	YPE_1914	pqiB		TRUE	0.996	-3.000	0.531	NA		NA
4588260	4588261	YPE_1914	YPE_1915			TRUE	0.498	49.000	0.000	NA		NA
4588261	4588262	YPE_1915	YPE_1916		rmf	FALSE	0.317	81.000	0.000	NA		NA
4588262	4588263	YPE_1916	YPE_1917	rmf	tnp	FALSE	0.057	198.000	0.000	NA	N	NA
4588264	4588266	YPE_1830C	YPE_1918			FALSE	0.346	72.000	0.000	NA		NA
4588266	4588267	YPE_1918	YPE_1919			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4588270	4588271	YPE_1921	YPE_1922			TRUE	0.550	84.000	0.119	NA		NA
4588271	4588272	YPE_1922	YPE_1923		potI	TRUE	0.708	125.000	0.264	NA		NA
4588272	4588273	YPE_1923	YPE_1924	potI	potH	TRUE	0.999	-3.000	0.528	0.059	Y	NA
4588273	4588274	YPE_1924	YPE_1925	potH	potG	TRUE	0.997	25.000	0.857	1.000	Y	NA
4588274	4588275	YPE_1925	YPE_1926	potG	potF	TRUE	0.960	171.000	0.679	1.000	Y	NA
4588275	4588276	YPE_1926	YPE_1927	potF		FALSE	0.021	518.000	0.000	NA		NA
4588276	4588277	YPE_1927	YPE_1928			TRUE	0.844	7.000	0.000	NA		NA
4588277	4588278	YPE_1928	YPE_1929			TRUE	0.752	16.000	0.000	NA		NA
4588279	4588280	YPE_1930	YPE_1931	grxA		FALSE	0.031	410.000	0.000	1.000		NA
4588280	4588281	YPE_1931	YPE_1932		rybB	FALSE	0.294	93.000	0.000	NA		NA
4588281	4588282	YPE_1932	YPE_1933	rybB		FALSE	0.215	160.000	0.000	NA		NA
4588282	4588283	YPE_1933	YPE_1934		ybjG	TRUE	0.954	9.000	0.106	0.094		NA
4588283	4588284	YPE_1934	YPE_1935	ybjG		FALSE	0.080	258.000	0.000	1.000		NA
4588284	4588285	YPE_1935	YPE_1936		deoR	FALSE	0.038	230.000	0.030	1.000	N	NA
4588285	4588286	YPE_1936	YPE_1937	deoR	sdaC	FALSE	0.005	1100.000	0.000	1.000	N	NA
4588287	4588288	YPE_1938	YPE_1939	dacC		FALSE	0.038	242.000	0.000	1.000	N	NA
4588288	4588289	YPE_1939	YPE_1940			TRUE	0.994	-3.000	0.096	1.000	Y	NA
4588289	4588290	YPE_1940	YPE_1941			TRUE	0.998	-3.000	0.323	NA	Y	NA
4588290	4588291	YPE_1941	YPE_1942			FALSE	0.340	228.000	0.174	NA		NA
4588292	4588293	YPE_1943	YPE_1944			FALSE	0.165	154.000	0.056	1.000	N	NA
4588294	4588295	YPE_1945	YPE_1946		yiuC	FALSE	0.362	260.000	0.000	1.000	Y	NA
4588295	4588296	YPE_1946	YPE_1947	yiuC	yiuB	TRUE	0.999	-3.000	0.833	1.000	Y	NA
4588296	4588297	YPE_1947	YPE_1948	yiuB	yiuA	TRUE	0.777	195.000	0.175	1.000	Y	NA
4588297	4588298	YPE_1948	YPE_1949	yiuA	lysP	FALSE	0.025	286.000	0.000	1.000	N	NA
4588298	4588299	YPE_1949	YPE_1950	lysP		FALSE	0.252	258.000	0.222	1.000	N	NA
4588300	4588301	YPE_1951	YPE_1952		nfo	FALSE	0.240	164.000	0.040	1.000		NA
4588302	4588303	YPE_1953	YPE_1954	psaC	psaB	TRUE	0.893	42.000	0.000	1.000	Y	NA
4588303	4588304	YPE_1954	YPE_1955	psaB	psaA	TRUE	0.801	127.000	0.400	NA		NA
4588304	4588305	YPE_1955	YPE_1956	psaA	psaF	FALSE	0.019	545.000	0.000	NA		NA
4588305	4588306	YPE_1956	YPE_1957	psaF	psaE	TRUE	0.999	-3.000	1.000	NA		NA
4588306	4588307	YPE_1957	YPE_1958	psaE	fruA	FALSE	0.018	325.000	0.000	1.000	N	NA
4588307	4588308	YPE_1958	YPE_1959	fruA	fruK	TRUE	0.996	15.000	0.562	1.000	Y	NA
4588308	4588309	YPE_1959	YPE_1960	fruK	fruB	TRUE	0.994	-3.000	0.112	1.000	Y	NA
4588311	4588312	YPE_1962	YPE_1963			TRUE	0.989	36.000	0.375	0.013	Y	NA
4588312	4588313	YPE_1963	YPE_1964			TRUE	0.935	109.000	0.375	NA	Y	NA
4588313	4588314	YPE_1964	YPE_1965			TRUE	0.676	140.000	0.000	NA	Y	NA
4588314	4588315	YPE_1965	YPE_1966			TRUE	0.948	20.000	0.000	1.000	Y	NA
4588315	4588316	YPE_1966	YPE_1967			TRUE	0.863	4.000	0.065	1.000	N	NA
4588317	4588318	YPE_1968	YPE_1969		serA1	TRUE	0.968	-3.000	0.017	0.043		NA
4588318	4588319	YPE_1969	YPE_1970	serA1		TRUE	0.861	11.000	0.000	0.043	N	NA
4588321	4588322	YPE_1972	YPE_1973	mtr		TRUE	0.478	104.000	0.153	1.000	N	NA
4588325	4588326	YPE_1976	YPE_1977			TRUE	0.644	109.000	0.200	NA		NA
4588327	4588328	YPE_1978	YPE_1979			TRUE	0.855	59.000	0.275	NA		NA
4588328	4588329	YPE_1979	YPE_1980		spr	FALSE	0.026	442.000	0.000	NA		NA
4588329	4588330	YPE_1980	YPE_1982	spr		FALSE	0.004	2250.000	0.000	NA	N	NA
4588330	4588331	YPE_1982	YPE_1983			TRUE	0.997	10.000	0.848	0.059		NA
4588331	4588332	YPE_1983	YPE_1984			TRUE	0.999	0.000	0.833	0.059		NA
4588332	4588333	YPE_1984	YPE_1985			TRUE	0.997	2.000	0.758	1.000		NA
4588334	4588335	YPE_1986	YPE_1987		bcr	FALSE	0.014	967.000	0.000	NA		NA
4588335	4588336	YPE_1987	YPE_1988	bcr	rsuA	TRUE	0.444	119.000	0.145	1.000	N	NA
4588337	4588338	YPE_1989	YPE_1990		rplY	FALSE	0.282	162.000	0.024	0.012	N	NA
4588339	4588340	YPE_1991	YPE_1992	tnp		FALSE	0.149	201.000	0.000	NA		NA
4588341	4588342	YPE_1993	YPE_1994			TRUE	0.669	28.000	0.040	NA		NA
4588342	4588343	YPE_1994	YPE_1995			FALSE	0.268	105.000	0.000	NA		NA
4588343	4588344	YPE_1995	YPE_1996			TRUE	0.490	50.000	0.000	NA		NA
4588344	4588346	YPE_1996	YPE_1997			FALSE	0.037	357.000	0.000	NA		NA
4588346	4588347	YPE_1997	YPE_1998			TRUE	0.789	13.000	0.000	NA		NA
4588347	4588348	YPE_1998	YPE_1999			FALSE	0.016	700.000	0.000	NA		NA
4588349	4588350	YPE_2000	YPE_2001	bglA		FALSE	0.086	291.000	0.000	0.016	N	NA
4588350	4588351	YPE_2001	YPE_2002		stf	FALSE	0.054	298.000	0.000	NA		NA
4588351	4588352	YPE_2002	YPE_2003	stf		FALSE	0.285	97.000	0.000	NA		NA
4588352	4588353	YPE_2003	YPE_2004			TRUE	0.934	-3.000	0.000	NA		NA
4588353	4588354	YPE_2004	YPE_2005			TRUE	0.996	-3.000	0.500	NA		NA
4588354	4588355	YPE_2005	YPE_2006			TRUE	0.997	4.000	1.000	NA		NA
4588355	4588356	YPE_2006	YPE_2007			TRUE	0.999	-3.000	1.000	NA		NA
4588356	4588357	YPE_2007	YPE_2008			TRUE	0.994	16.000	1.000	NA		NA
4588357	4588358	YPE_2008	YPE_2009			TRUE	0.962	-3.000	0.074	NA		NA
4588358	4588359	YPE_2009	YPE_2010			FALSE	0.116	267.000	0.074	NA		NA
4588359	4588360	YPE_2010	YPE_2011			TRUE	0.899	121.000	0.667	NA		NA
4588360	4588361	YPE_2011	YPE_2012			TRUE	0.998	2.000	1.000	NA		NA
4588361	4588362	YPE_2012	YPE_2013			TRUE	0.992	22.000	1.000	NA		NA
4588362	4588363	YPE_2013	YPE_2014			TRUE	0.996	-3.000	0.500	NA		NA
4588363	4588364	YPE_2014	YPE_2015			TRUE	0.991	5.000	0.500	NA		NA
4588364	4588365	YPE_2015	YPE_2016			TRUE	0.515	46.000	0.000	NA		NA
4588365	4588366	YPE_2016	YPE_2017			FALSE	0.017	614.000	0.000	NA		NA
4588366	4588367	YPE_2017	YPE_2018			TRUE	0.992	18.000	0.400	1.000	Y	NA
4588367	4588368	YPE_2018	YPE_2019			FALSE	0.016	706.000	0.000	NA		NA
4588368	4588369	YPE_2019	YPE_2020			FALSE	0.146	202.000	0.000	NA		NA
4588370	4588371	YPE_2021	YPE_2022		msgA	FALSE	0.146	206.000	0.000	1.000		NA
4588371	4588372	YPE_2022	YPE_2023	msgA	pla2	FALSE	0.212	172.000	0.000	1.000		NA
4588372	4588373	YPE_2023	YPE_2024	pla2	tsr2	FALSE	0.011	422.000	0.000	1.000	N	NA
4588375	4588376	YPE_2026	YPE_2027		ampH	FALSE	0.022	275.000	0.000	NA	N	NA
4588377	4588378	YPE_2028	YPE_2029			TRUE	0.854	6.000	0.000	NA		NA
4588378	4588379	YPE_2029	YPE_2030		tnp	FALSE	0.014	1145.000	0.000	NA		NA
4588379	4588380	YPE_2030	YPE_2031	tnp	ompC	FALSE	0.063	202.000	0.000	1.000	N	NA
4588381	4588382	YPE_2032	YPE_2033	micF		FALSE	0.016	699.000	0.000	NA		NA
4588382	4588383	YPE_2033	YPE_2035			TRUE	0.688	24.000	0.000	NA		NA
4588383	4588385	YPE_2035	YPE_2036		rcsB	TRUE	0.900	3.000	0.000	NA		NA
4588386	4588387	YPE_2037	YPE_2038	rcsC	gyrA	FALSE	0.156	188.000	0.013	0.099	N	NA
4588388	4588389	YPE_2039	YPE_2040	ubiG	nrdA	FALSE	0.009	494.000	0.000	1.000	N	NA
4588389	4588390	YPE_2040	YPE_2041	nrdA	nrdB	TRUE	0.989	163.000	1.000	0.001	Y	NA
4588390	4588391	YPE_2041	YPE_2042	nrdB	yfaE	TRUE	0.747	4.000	0.034	1.000	N	NA
4588391	4588392	YPE_2042	YPE_2043	yfaE	eco	TRUE	0.551	35.000	0.023	NA		NA
4588398	4588399	YPE_2049	YPE_2050	ompC2		FALSE	0.060	412.000	0.000	0.093		NA
4588400	4588401	YPE_2051	YPE_2052			TRUE	0.944	70.000	0.286	1.000	Y	NA
4588401	4588402	YPE_2052	YPE_2053			FALSE	0.193	484.000	0.000	0.093	Y	NA
4588402	4588403	YPE_2053	YPE_2054			TRUE	0.999	-3.000	0.542	1.000	Y	NA
4588403	4588404	YPE_2054	YPE_2055			TRUE	0.999	-3.000	0.489	1.000	Y	NA
4588404	4588405	YPE_2055	YPE_2056			FALSE	0.072	261.000	0.000	NA		NA
4588408	4588409	YPE_2059	YPE_2060			TRUE	0.688	24.000	0.000	NA		NA
4588409	4588410	YPE_2060	YPE_2061			FALSE	0.258	115.000	0.000	NA		NA
4588410	4588411	YPE_2061	YPE_2062			TRUE	0.954	94.000	0.731	0.019		NA
4588411	4588412	YPE_2062	YPE_2063			TRUE	0.998	-3.000	0.823	1.000		NA
4588412	4588413	YPE_2063	YPE_2064			TRUE	1.000	0.000	0.758	0.058	Y	NA
4588413	4588414	YPE_2064	YPE_2065			TRUE	0.967	124.000	0.654	1.000	Y	NA
4588414	4588415	YPE_2065	YPE_2066			FALSE	0.026	435.000	0.000	NA		NA
4588415	4588416	YPE_2066	YPE_2067			FALSE	0.087	246.000	0.000	NA		NA
4588416	4588417	YPE_2067	YPE_2068			TRUE	0.999	-3.000	0.491	0.001	Y	NA
4588417	4588418	YPE_2068	YPE_2069			TRUE	0.973	163.000	0.568	0.001	Y	NA
4588418	4588419	YPE_2069	YPE_2070			TRUE	0.995	37.000	0.589	0.002	Y	NA
4588419	4588420	YPE_2070	YPE_2071			FALSE	0.137	208.000	0.032	1.000		NA
4588420	4588421	YPE_2071	YPE_2072			TRUE	0.511	110.000	0.125	NA		NA
4588425	4588426	YPE_2076	YPE_2077	pbpG	dusC	FALSE	0.007	592.000	0.000	1.000	N	NA
4588426	4588427	YPE_2077	YPE_2078	dusC		FALSE	0.056	294.000	0.000	NA		NA
4588427	4588428	YPE_2078	YPE_2079		tnp	FALSE	0.028	415.000	0.000	NA		NA
4588428	4588429	YPE_2079	YPE_2080	tnp	xapA	FALSE	0.006	929.000	0.000	1.000	N	NA
4588431	4588432	YPE_2082	YPE_2083		betT	FALSE	0.043	232.000	0.000	1.000	N	NA
4588433	4588434	YPE_2084	YPE_2085	betI	betB	TRUE	0.900	58.000	0.459	1.000	N	NA
4588434	4588435	YPE_2085	YPE_2086	betB	betA	TRUE	0.977	23.000	0.634	1.000	N	NA
4588436	4588437	YPE_2087	YPE_2088	tnp		FALSE	0.108	235.000	0.000	1.000		NA
4588437	4588438	YPE_2088	YPE_2089		moaE	FALSE	0.221	143.000	0.025	1.000		NA
4588438	4588439	YPE_2089	YPE_2090	moaE	moaD	TRUE	0.999	0.000	0.501	0.003	Y	NA
4588439	4588440	YPE_2090	YPE_2091	moaD	moaC	TRUE	0.998	-3.000	0.175	0.003	Y	NA
4588440	4588441	YPE_2091	YPE_2092	moaC	moaA	TRUE	0.844	101.000	0.039	0.003	Y	NA
4588443	4588444	YPE_2094	YPE_2095		uvrB	FALSE	0.039	292.000	0.003	NA		NA
4588446	4588447	YPE_2097	YPE_2098	bioD	bioC	TRUE	0.995	-7.000	0.054	0.002	Y	NA
4588447	4588448	YPE_2098	YPE_2099	bioC	bioF	TRUE	0.996	-16.000	0.133	0.002	Y	NA
4588448	4588449	YPE_2099	YPE_2100	bioF	bioB	TRUE	0.998	0.000	0.168	0.002	Y	NA
4588453	4588454	YPE_2104	YPE_2105	modC	modB	TRUE	0.999	-6.000	0.537	0.001	Y	NA
4588454	4588455	YPE_2105	YPE_2106	modB	modA	TRUE	0.999	0.000	0.627	0.001	Y	NA
4588455	4588456	YPE_2106	YPE_2107	modA		FALSE	0.161	235.000	0.072	NA		NA
4588457	4588458	YPE_2108	YPE_2109	modE	modF	TRUE	0.414	110.000	0.028	0.099		NA
4588458	4588459	YPE_2109	YPE_2110	modF		FALSE	0.090	217.000	0.009	NA		NA
4588459	4588460	YPE_2110	YPE_2111		galE	FALSE	0.037	360.000	0.000	NA		NA
4588460	4588461	YPE_2111	YPE_2112	galE	galT	TRUE	0.927	10.000	0.053	0.001	N	NA
4588461	4588462	YPE_2112	YPE_2113	galT	galK	TRUE	0.996	-3.000	0.370	0.001	N	NA
4588462	4588463	YPE_2113	YPE_2115	galK	galM	TRUE	0.924	-6.000	0.000	NA		NA
4588463	4588465	YPE_2115	YPE_2116	galM	psiF	FALSE	0.057	293.000	0.000	NA		NA
4588465	4588466	YPE_2116	YPE_2117	psiF	gpmA	FALSE	0.040	347.000	0.000	NA		NA
4588469	4588470	YPE_2119	YPE_2120			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4588470	4588471	YPE_2120	YPE_2122			FALSE	0.005	1475.000	0.000	1.000	N	NA
4588472	4588473	YPE_2123	YPE_2124	pnuC	nadA	TRUE	0.693	122.000	0.023	1.000	Y	NA
4588473	4588474	YPE_2124	YPE_2125	nadA		FALSE	0.035	369.000	0.000	NA		NA
4588474	4588476	YPE_2125	YPE_2126			TRUE	0.641	29.000	0.000	NA		NA
4588476	4588477	YPE_2126	YPE_2127			TRUE	0.649	28.000	0.000	NA		NA
4588477	4588478	YPE_2127	YPE_2128			FALSE	0.166	191.000	0.000	NA		NA
4588478	4588479	YPE_2128	YPE_2129		pal	TRUE	0.910	10.000	0.088	1.000		NA
4588479	4588480	YPE_2129	YPE_2130	pal	tolB	TRUE	0.939	51.000	0.592	1.000	N	NA
4588480	4588481	YPE_2130	YPE_2131	tolB	tolA	FALSE	0.156	120.000	0.051	NA	N	NA
4588481	4588482	YPE_2131	YPE_2132	tolA	tolR	FALSE	0.352	112.000	0.114	NA	N	NA
4588482	4588483	YPE_2132	YPE_2133	tolR	tolQ	TRUE	0.997	13.000	0.556	0.073	Y	NA
4588483	4588484	YPE_2133	YPE_2134	tolQ		TRUE	0.996	0.000	0.593	1.000		NA
4588484	4588485	YPE_2134	YPE_2135			TRUE	0.412	132.000	0.095	NA		NA
4588485	4588486	YPE_2135	YPE_2136		cydB	TRUE	0.494	92.000	0.100	NA		NA
4588486	4588487	YPE_2136	YPE_2137	cydB	cydA	TRUE	0.995	15.000	0.348	0.037	Y	NA
4588487	4588488	YPE_2137	YPE_2138	cydA	sucD	FALSE	0.099	767.000	0.000	1.000	Y	NA
4588488	4588489	YPE_2138	YPE_2139	sucD	sucC	TRUE	1.000	0.000	0.806	0.001	Y	NA
4588489	4588490	YPE_2139	YPE_2140	sucC	sucB	TRUE	0.838	113.000	0.136	1.000	Y	NA
4588490	4588491	YPE_2140	YPE_2141	sucB	sucA	TRUE	0.994	30.000	0.667	1.000	Y	NA
4588491	4588492	YPE_2141	YPE_2142	sucA	sdhB	FALSE	0.267	356.000	0.067	1.000	Y	NA
4588492	4588493	YPE_2142	YPE_2143	sdhB	sdhA	TRUE	0.993	50.000	0.604	0.002	Y	NA
4588493	4588494	YPE_2143	YPE_2144	sdhA	sdhD	TRUE	1.000	1.000	0.705	0.002	Y	NA
4588494	4588495	YPE_2144	YPE_2145	sdhD	sdhC	TRUE	0.999	-6.000	0.453	0.001	Y	NA
4588498	4588499	YPE_2148	YPE_2149		recN	TRUE	0.557	87.000	0.170	1.000	N	NA
4588499	4588500	YPE_2149	YPE_2150	recN	smpA	FALSE	0.176	105.000	0.049	1.000	N	NA
4588501	4588502	YPE_2151	YPE_2152			TRUE	0.970	-7.000	0.124	NA		NA
4588503	4588504	YPE_2153	YPE_2154	smpB	ssrA	TRUE	0.498	49.000	0.000	NA		NA
4588504	4588505	YPE_2154	YPE_2155	ssrA	tnp	FALSE	0.113	223.000	0.000	NA		NA
4588505	4588506	YPE_2155	YPE_2156	tnp		TRUE	0.576	224.000	0.000	0.081	Y	NA
4588506	4588507	YPE_2156	YPE_2157			FALSE	0.321	79.000	0.000	NA		NA
4588507	4588508	YPE_2157	YPE_2158			TRUE	0.866	51.000	0.250	NA		NA
4588510	4588511	YPE_2160	YPE_2161			FALSE	0.296	92.000	0.000	NA		NA
4588511	4588512	YPE_2161	YPE_2162			TRUE	0.974	13.000	0.333	NA		NA
4588512	4588513	YPE_2162	YPE_2163			FALSE	0.163	193.000	0.000	NA		NA
4588513	4588514	YPE_2163	YPE_2164			TRUE	0.995	-7.000	0.500	NA		NA
4588514	4588515	YPE_2164	YPE_2165			TRUE	0.934	-3.000	0.000	NA		NA
4588517	4588519	YPE_2168	YPE_2169	intA		FALSE	0.299	89.000	0.000	NA		NA
4588519	4588520	YPE_2169	YPE_2170			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4588524	4588525	YPE_2172	YPE_2173		dnaQ	FALSE	0.259	113.000	0.000	NA		NA
4588528	4588529	YPE_2176	YPE_2177	gloB	mltD	TRUE	0.776	72.000	0.233	1.000		NA
4588530	4588531	YPE_2178	YPE_2179			FALSE	0.037	361.000	0.000	NA		NA
4588531	4588532	YPE_2179	YPE_2180		dkgB	TRUE	0.592	35.000	0.000	NA		NA
4588532	4588533	YPE_2180	YPE_2181	dkgB		FALSE	0.037	359.000	0.000	NA		NA
4588533	4588534	YPE_2181	YPE_2182			FALSE	0.251	124.000	0.000	NA		NA
4588534	4588535	YPE_2182	YPE_2183			FALSE	0.265	108.000	0.000	NA		NA
4588535	4588536	YPE_2183	YPE_2184			FALSE	0.079	253.000	0.000	NA		NA
4588536	4588537	YPE_2184	YPE_2185			FALSE	0.235	137.000	0.000	NA		NA
4588538	4588539	YPE_2186	YPE_2187		gmhB	FALSE	0.026	442.000	0.000	NA		NA
4588540	4588541	YPE_2188	YPE_2189	abc		TRUE	0.999	-7.000	0.584	1.000	Y	NA
4588541	4588542	YPE_2189	YPE_2190			TRUE	0.968	64.000	0.411	NA	Y	NA
4588542	4588543	YPE_2190	YPE_2191		rcsF	TRUE	0.853	118.000	0.500	NA		NA
4588543	4588544	YPE_2191	YPE_2192	rcsF		TRUE	0.989	-3.000	0.247	NA		NA
4588544	4588545	YPE_2192	YPE_2193		proS	FALSE	0.313	104.000	0.048	NA		NA
4588546	4588547	YPE_2194	YPE_2195	cutF		TRUE	0.524	40.000	0.027	NA		NA
4588547	4588548	YPE_2195	YPE_2196			TRUE	0.906	3.000	0.034	1.000		NA
4588549	4588550	YPE_2197	YPE_2198			TRUE	0.976	-13.000	0.179	NA		NA
4588551	4588552	YPE_2199	YPE_2200		tilS	FALSE	0.015	237.000	0.005	1.000	N	NA
4588552	4588553	YPE_2200	YPE_2201	tilS		TRUE	0.670	2.000	0.015	1.000	N	NA
4588553	4588554	YPE_2201	YPE_2202		accA	FALSE	0.034	184.000	0.008	1.000	N	NA
4588554	4588555	YPE_2202	YPE_2203	accA	dnaE	TRUE	0.871	13.000	0.122	1.000	N	NA
4588555	4588556	YPE_2203	YPE_2204	dnaE	rnhB	TRUE	0.792	130.000	0.104	1.000	Y	NA
4588556	4588557	YPE_2204	YPE_2205	rnhB	lpxB	TRUE	0.979	-3.000	0.186	1.000	N	NA
4588557	4588558	YPE_2205	YPE_2206	lpxB	lpxA	TRUE	0.996	4.000	0.289	1.000	Y	NA
4588558	4588559	YPE_2206	YPE_2207	lpxA	fabZ	TRUE	0.996	4.000	0.850	1.000	N	NA
4588559	4588560	YPE_2207	YPE_2208	fabZ	lpxD	TRUE	0.883	158.000	0.796	1.000	N	NA
4588560	4588561	YPE_2208	YPE_2209	lpxD	ompH	TRUE	0.999	4.000	0.814	1.000	Y	NA
4588561	4588562	YPE_2209	YPE_2210	ompH		TRUE	0.916	158.000	0.354	1.000	Y	NA
4588562	4588563	YPE_2210	YPE_2211			TRUE	0.966	37.000	0.204	1.000	Y	NA
4588563	4588564	YPE_2211	YPE_2212		geneA	TRUE	0.655	29.000	0.080	1.000	N	NA
4588564	4588565	YPE_2212	YPE_2213	geneA	uppS	TRUE	0.995	10.000	0.400	1.000	Y	NA
4588565	4588566	YPE_2213	YPE_2214	uppS	dxr	TRUE	0.460	224.000	0.025	1.000	Y	NA
4588566	4588567	YPE_2214	YPE_2215	dxr	frr	FALSE	0.048	214.000	0.032	1.000	N	NA
4588567	4588568	YPE_2215	YPE_2216	frr	pyrH	TRUE	0.846	136.000	0.626	1.000	N	NA
4588568	4588569	YPE_2216	YPE_2217	pyrH	tsf	TRUE	0.593	209.000	0.416	1.000	N	NA
4588569	4588570	YPE_2217	YPE_2218	tsf	rpsB	TRUE	0.973	128.000	0.748	1.000	Y	NA
4588570	4588571	YPE_2218	YPE_2219	rpsB	tff	TRUE	0.649	28.000	0.000	NA		NA
4588572	4588573	YPE_2220	YPE_2221	ampM	glnD	TRUE	0.977	3.000	0.243	1.000	N	NA
4588573	4588574	YPE_2221	YPE_2222	glnD	dapD	FALSE	0.247	175.000	0.097	1.000	N	NA
4588574	4588575	YPE_2222	YPE_2223	dapD		FALSE	0.255	124.000	0.035	NA		NA
4588576	4588577	YPE_2224	YPE_2225		truC	TRUE	0.873	28.000	0.209	1.000	N	NA
4588577	4588578	YPE_2225	YPE_2226	truC		TRUE	0.996	0.000	0.518	1.000		NA
4588578	4588579	YPE_2226	YPE_2227		tnp	FALSE	0.084	254.000	0.000	1.000		NA
4588579	4588580	YPE_2227	YPE_2228	tnp	csrB	FALSE	0.228	144.000	0.000	NA		NA
4588580	4588581	YPE_2228	YPE_2229	csrB	syd	FALSE	0.105	229.000	0.000	NA		NA
4588582	4588583	YPE_2230	YPE_2231	queF		FALSE	0.360	153.000	0.079	1.000		NA
4588583	4588584	YPE_2231	YPE_2232		exo	FALSE	0.268	260.000	0.178	1.000		NA
4588585	4588586	YPE_2233	YPE_2234			TRUE	0.975	-7.000	0.144	NA		NA
4588586	4588587	YPE_2234	YPE_2235		gcvA	FALSE	0.347	166.000	0.081	1.000		NA
4588588	4588589	YPE_2236	YPE_2237	gcvB		FALSE	0.126	213.000	0.000	NA		NA
4588589	4588590	YPE_2237	YPE_2238			TRUE	0.690	135.000	0.122	0.001		NA
4588591	4588592	YPE_2239	YPE_2240		mltA	FALSE	0.068	143.000	0.021	1.000	N	NA
4588593	4588594	YPE_2241	YPE_2242			FALSE	0.251	124.000	0.000	NA		NA
4588597	4588598	YPE_2245	YPE_2246	recD	recB	TRUE	1.000	-3.000	0.688	0.001	Y	NA
4588598	4588599	YPE_2246	YPE_2247	recB	ptr	TRUE	0.947	-3.000	0.092	1.000	N	NA
4588599	4588600	YPE_2247	YPE_2248	ptr	recC	FALSE	0.367	82.000	0.092	1.000	N	NA
4588600	4588601	YPE_2248	YPE_2249	recC		FALSE	0.230	135.000	0.076	NA	N	NA
4588601	4588602	YPE_2249	YPE_2250			TRUE	0.994	-12.000	0.538	NA		NA
4588602	4588603	YPE_2250	YPE_2251			TRUE	0.994	-3.000	0.373	NA		NA
4588603	4588604	YPE_2251	YPE_2486C		ppdA	TRUE	0.911	-9.000	0.000	NA		NA
4588604	4588606	YPE_2486C	YPE_2253	ppdA		FALSE	0.346	72.000	0.000	NA		NA
4588606	4588607	YPE_2253	YPE_2254			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4588607	4588608	YPE_2254	YPE_2255			FALSE	0.005	3578.000	0.000	1.000	N	NA
4588608	4588609	YPE_2255	YPE_2256			FALSE	0.013	388.000	0.000	1.000	N	NA
4588609	4588610	YPE_2256	YPE_2257			FALSE	0.355	78.000	0.089	NA	N	NA
4588611	4588612	YPE_2258	YPE_2259			FALSE	0.292	208.000	0.000	0.013		NA
4588612	4588613	YPE_2259	YPE_2260			FALSE	0.048	563.000	0.000	0.013		NA
4588614	4588615	YPE_2261	YPE_2262	yapH		FALSE	0.015	854.000	0.000	NA		NA
4588617	4588618	YPE_2264	YPE_2265			TRUE	0.991	13.000	0.842	1.000	N	NA
4588619	4588620	YPE_2266	YPE_2267			TRUE	0.882	4.000	0.000	NA		NA
4588621	4588622	YPE_2268	YPE_2269			TRUE	0.939	54.000	0.167	1.000	Y	NA
4588623	4588625	YPE_2510C	YPE_2270			FALSE	0.222	153.000	0.000	NA		NA
4588626	4588627	YPE_2271	YPE_2272	iutA	iucD	TRUE	0.428	72.000	0.100	1.000	N	NA
4588627	4588628	YPE_2272	YPE_2273	iucD	iucC	TRUE	0.998	-3.000	0.417	1.000	Y	NA
4588628	4588629	YPE_2273	YPE_2274	iucC	iucB	TRUE	0.990	-3.000	0.250	1.000		NA
4588629	4588630	YPE_2274	YPE_2275	iucB	iucA	TRUE	0.899	-16.000	0.000	NA		NA
4588633	4588634	YPE_2278	YPE_2279			FALSE	0.036	377.000	0.000	1.000		NA
4588637	4588638	YPE_2282	YPE_2283			FALSE	0.025	451.000	0.000	NA		NA
4588638	4588639	YPE_2283	YPE_2284			FALSE	0.369	68.000	0.000	NA		NA
4588639	4588640	YPE_2284	YPE_2285			TRUE	0.584	36.000	0.000	NA		NA
4588640	4588642	YPE_2285	YPE_2286			FALSE	0.267	106.000	0.000	NA		NA
4588642	4588643	YPE_2286	YPE_2287			FALSE	0.013	1400.000	0.000	NA		NA
4588643	4588644	YPE_2287	YPE_2288			TRUE	0.533	43.000	0.000	NA		NA
4588644	4588645	YPE_2288	YPE_2289			TRUE	0.800	12.000	0.000	NA		NA
4588645	4588646	YPE_2289	YPE_2290			TRUE	0.998	-3.000	0.750	NA		NA
4588646	4588647	YPE_2290	YPE_2291			TRUE	0.924	0.000	0.000	NA		NA
4588647	4588648	YPE_2291	YPE_2292			TRUE	0.882	4.000	0.000	NA		NA
4588648	4588649	YPE_2292	YPE_2293			FALSE	0.053	418.000	0.083	NA		NA
4588649	4588650	YPE_2293	YPE_2294			TRUE	0.976	-3.000	0.125	NA		NA
4588650	4588651	YPE_2294	YPE_2295			TRUE	0.764	15.000	0.000	NA		NA
4588651	4588652	YPE_2295	YPE_2296			FALSE	0.261	111.000	0.000	NA		NA
4588652	4588653	YPE_2296	YPE_2297			FALSE	0.032	387.000	0.000	NA		NA
4588653	4588654	YPE_2297	YPE_2298			TRUE	0.472	54.000	0.000	NA		NA
4588654	4588656	YPE_2298	YPE_2299			FALSE	0.020	535.000	0.000	NA		NA
4588656	4588657	YPE_2299	YPE_2300			TRUE	0.752	16.000	0.000	NA		NA
4588657	4588658	YPE_2300	YPE_2301			TRUE	0.866	5.000	0.000	NA		NA
4588658	4588659	YPE_2301	YPE_2302			FALSE	0.287	96.000	0.000	NA		NA
4588659	4588660	YPE_2302	YPE_2303		insB	TRUE	0.881	66.000	0.000	0.026	Y	NA
4588660	4588661	YPE_2303	YPE_2304	insB		FALSE	0.017	608.000	0.000	NA		NA
4588661	4588662	YPE_2304	YPE_2305			TRUE	0.656	27.000	0.000	NA		NA
4588665	4588666	YPE_2308	YPE_2309	speC		FALSE	0.007	556.000	0.000	1.000	N	NA
4588666	4588667	YPE_2309	YPE_2310			TRUE	0.991	46.000	0.545	0.013	Y	NA
4588667	4588668	YPE_2310	YPE_2311			TRUE	1.000	-3.000	0.727	0.013	Y	NA
4588669	4588670	YPE_2312	YPE_2313			TRUE	0.948	38.000	0.128	1.000	Y	NA
4588670	4588671	YPE_2313	YPE_2314		mltC	FALSE	0.009	429.000	0.000	NA	N	NA
4588671	4588672	YPE_2314	YPE_2315	mltC		FALSE	0.319	171.000	0.128	NA	N	NA
4588672	4588673	YPE_2315	YPE_2316		mutY	FALSE	0.363	178.000	0.150	1.000	N	NA
4588674	4588675	YPE_2317	YPE_2318			TRUE	0.963	0.000	0.092	NA		NA
4588675	4588676	YPE_2318	YPE_2319			TRUE	0.503	111.000	0.123	NA		NA
4588676	4588677	YPE_2319	YPE_2321		yggN	FALSE	0.260	112.000	0.000	NA		NA
4588677	4588679	YPE_2321	YPE_2322	yggN		FALSE	0.022	499.000	0.000	NA		NA
4588680	4588681	YPE_2323	YPE_2324			TRUE	0.978	-7.000	0.218	1.000	N	NA
4588681	4588682	YPE_2324	YPE_2325			FALSE	0.225	100.000	0.016	NA		NA
4588682	4588683	YPE_2325	YPE_2326			TRUE	0.964	-3.000	0.081	NA		NA
4588683	4588684	YPE_2326	YPE_2327		proC	FALSE	0.151	288.000	0.117	1.000		NA
4588684	4588685	YPE_2327	YPE_2328	proC		TRUE	0.482	133.000	0.125	NA		NA
4588687	4588688	YPE_2330	YPE_2331			TRUE	0.946	4.000	0.095	1.000		NA
4588688	4588689	YPE_2331	YPE_2332			FALSE	0.145	180.000	0.004	1.000		NA
4588689	4588690	YPE_2332	YPE_2333			TRUE	0.984	0.000	0.263	NA	N	NA
4588690	4588691	YPE_2333	YPE_2334		gshB	FALSE	0.362	116.000	0.120	NA	N	NA
4588691	4588692	YPE_2334	YPE_2335	gshB		TRUE	0.895	26.000	0.173	NA		NA
4588692	4588693	YPE_2335	YPE_2336		endA	FALSE	0.307	252.000	0.201	NA		NA
4588693	4588694	YPE_2336	YPE_2337	endA	sprT	TRUE	0.686	98.000	0.210	1.000		NA
4588694	4588695	YPE_2337	YPE_2338	sprT	metK	FALSE	0.166	193.000	0.030	1.000		NA
4588696	4588697	YPE_2339	YPE_2340	speA		FALSE	0.039	160.000	0.006	1.000	N	NA
4588699	4588700	YPE_2342	YPE_2343	tktA	tnp	FALSE	0.020	308.000	0.000	1.000	N	NA
4588700	4588701	YPE_2343	YPE_2344	tnp		TRUE	0.702	184.000	0.000	0.079	Y	NA
4588701	4588702	YPE_2344	YPE_2345			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4588702	4588703	YPE_2345	YPE_2346		epd	FALSE	0.019	315.000	0.000	1.000	N	NA
4588703	4588704	YPE_2346	YPE_2347	epd	pgk	TRUE	0.866	103.000	0.070	0.005	Y	NA
4588704	4588705	YPE_2347	YPE_2348	pgk	fbaA	TRUE	0.843	120.000	0.056	0.005	Y	NA
4588705	4588706	YPE_2348	YPE_2349	fbaA		FALSE	0.012	438.000	0.038	1.000	N	NA
4588706	4588707	YPE_2349	YPE_2350			FALSE	0.093	263.000	0.049	1.000		NA
4588707	4588708	YPE_2350	YPE_2351			FALSE	0.269	190.000	0.075	NA		NA
4588710	4588711	YPE_2353	YPE_2354	rpiA	serA	FALSE	0.017	307.000	0.029	1.000	N	NA
4588712	4588713	YPE_2355	YPE_2356		ssrS	FALSE	0.248	127.000	0.000	NA		NA
4588714	4588715	YPE_2357	YPE_2358		ubiH	FALSE	0.048	1464.000	0.156	NA		NA
4588715	4588716	YPE_2358	YPE_2359	ubiH	visC	TRUE	0.963	173.000	0.474	0.001	Y	NA
4588716	4588717	YPE_2359	YPE_2360	visC	gcvT	FALSE	0.002	721.000	0.004	1.000	N	NA
4588717	4588718	YPE_2360	YPE_2361	gcvT	gcvH	TRUE	0.974	69.000	0.317	0.001	Y	NA
4588718	4588719	YPE_2361	YPE_2362	gcvH	gcvP	TRUE	0.882	212.000	0.249	0.001	Y	NA
4588719	4588720	YPE_2362	YPE_2363	gcvP		FALSE	0.033	378.000	0.000	NA		NA
4588720	4588721	YPE_2363	YPE_2364			FALSE	0.013	1210.000	0.000	NA		NA
4588721	4588722	YPE_2364	YPE_2365			TRUE	0.415	62.000	0.000	NA		NA
4588722	4588723	YPE_2365	YPE_2366			FALSE	0.146	202.000	0.000	NA		NA
4588723	4588724	YPE_2366	YPE_2367			FALSE	0.074	258.000	0.000	NA		NA
4588726	4588727	YPE_2369	YPE_2370			TRUE	0.929	-19.000	0.061	NA		NA
4588727	4588728	YPE_2370	YPE_2371		creB	TRUE	0.948	-3.000	0.051	NA		NA
4588728	4588729	YPE_2371	YPE_2372	creB	creC	TRUE	0.996	25.000	0.776	1.000	Y	NA
4588729	4588730	YPE_2372	YPE_2373	creC	creD	TRUE	0.706	100.000	0.311	NA	N	NA
4588732	4588733	YPE_2375	YPE_2376	xerD	dsbC	TRUE	0.636	31.000	0.079	1.000	N	NA
4588733	4588734	YPE_2376	YPE_2377	dsbC	recJ	TRUE	0.856	7.000	0.082	1.000	N	NA
4588734	4588735	YPE_2377	YPE_2378	recJ	prfB	FALSE	0.067	179.000	0.028	1.000	N	NA
4588735	4588736	YPE_2378	YPE_2379	prfB	lysS	TRUE	0.992	10.000	0.162	0.040	Y	NA
4588736	4588737	YPE_2379	YPE_2380	lysS		FALSE	0.161	194.000	0.000	NA		NA
4588737	4588738	YPE_2380	YPE_2381			FALSE	0.208	166.000	0.000	NA		NA
4588738	4588739	YPE_2381	YPE_2382			FALSE	0.005	865.000	0.000	NA	N	NA
4588739	4588740	YPE_2382	YPE_2383			TRUE	0.769	63.000	0.189	NA		NA
4588740	4588741	YPE_2383	YPE_2384		mqsR	FALSE	0.210	164.000	0.000	NA		NA
4588741	4588742	YPE_2384	YPE_2385	mqsR		TRUE	0.998	0.000	0.857	NA		NA
4588745	4588746	YPE_2388	YPE_2389			FALSE	0.183	182.000	0.000	NA		NA
4588746	4588747	YPE_2389	YPE_2390			TRUE	0.854	6.000	0.000	NA		NA
4588747	4588748	YPE_2390	YPE_2391			TRUE	0.789	13.000	0.000	NA		NA
4588749	4588750	YPE_2392	YPE_2393			FALSE	0.023	504.000	0.000	1.000		NA
4588750	4588751	YPE_2393	YPE_2394			FALSE	0.021	510.000	0.000	NA		NA
4588751	4588752	YPE_2394	YPE_2395			TRUE	0.510	47.000	0.000	NA		NA
4588752	4588753	YPE_2395	YPE_2396			FALSE	0.088	245.000	0.000	NA		NA
4588753	4588754	YPE_2396	YPE_2397			TRUE	0.971	21.000	0.429	NA		NA
4588754	4588755	YPE_2397	YPE_2398			FALSE	0.049	312.000	0.000	NA		NA
4588755	4588756	YPE_2398	YPE_2399			FALSE	0.317	81.000	0.000	NA		NA
4588756	4588757	YPE_2399	YPE_2400			FALSE	0.123	217.000	0.000	NA		NA
4588758	4588759	YPE_2401	YPE_2402			TRUE	0.950	0.000	0.065	NA		NA
4588759	4588760	YPE_2402	YPE_2403			FALSE	0.027	424.000	0.000	NA		NA
4588760	4588761	YPE_2403	YPE_2404			FALSE	0.034	376.000	0.000	NA		NA
4588761	4588762	YPE_2404	YPE_2405			FALSE	0.015	779.000	0.000	NA		NA
4588762	4588763	YPE_2405	YPE_2406			TRUE	0.499	435.000	0.217	0.012	Y	NA
4588763	4588764	YPE_2406	YPE_2407			TRUE	0.955	66.000	0.200	0.012	Y	NA
4588764	4588765	YPE_2407	YPE_2408			FALSE	0.170	549.000	0.000	0.096	Y	NA
4588766	4588767	YPE_2409	YPE_2410			TRUE	0.972	160.000	0.815	1.000	Y	NA
4588767	4588768	YPE_2410	YPE_2411			TRUE	0.999	12.000	0.885	0.057	Y	NA
4588768	4588769	YPE_2411	YPE_2412			TRUE	0.995	5.000	0.308	1.000	Y	NA
4588769	4588770	YPE_2412	YPE_2413		bgaB	TRUE	0.971	51.000	0.190	0.003	Y	NA
4588770	4588771	YPE_2413	YPE_2414	bgaB		TRUE	0.843	112.000	0.143	1.000	Y	NA
4588774	4588775	YPE_2417	YPE_2418			TRUE	0.916	148.000	0.341	1.000	Y	NA
4588777	4588778	YPE_2420	YPE_2421		agaY	TRUE	0.887	24.000	0.148	NA		NA
4588778	4588779	YPE_2421	YPE_2422	agaY		TRUE	0.720	109.000	0.261	NA		NA
4588779	4588780	YPE_2422	YPE_2423			TRUE	0.913	123.000	0.727	NA		NA
4588780	4588781	YPE_2423	YPE_2424			TRUE	0.983	21.000	0.615	1.000		NA
4588781	4588782	YPE_2424	YPE_2425			FALSE	0.203	244.000	0.000	0.016		NA
4588782	4588783	YPE_2425	YPE_2426		kduD2	TRUE	0.979	16.000	0.462	1.000		NA
4588783	4588784	YPE_2426	YPE_2427	kduD2		FALSE	0.068	196.000	0.000	1.000	N	NA
4588784	4588785	YPE_2427	YPE_2428			TRUE	0.991	3.000	0.104	1.000	Y	NA
4588785	4588786	YPE_2428	YPE_2429			TRUE	0.990	86.000	0.833	0.007	Y	NA
4588786	4588787	YPE_2429	YPE_2430			TRUE	1.000	-10.000	0.917	0.008	Y	NA
4588787	4588788	YPE_2430	YPE_2431			TRUE	0.996	47.000	0.909	0.008	Y	NA
4588788	4588789	YPE_2431	YPE_2432			TRUE	0.870	18.000	0.150	1.000	N	NA
4588789	4588790	YPE_2432	YPE_2433		agaZ	TRUE	0.985	-3.000	0.240	1.000	N	NA
4588790	4588791	YPE_2433	YPE_2434	agaZ		TRUE	0.977	50.000	0.400	1.000	Y	NA
4588795	4588796	YPE_2437	YPE_2438			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4588797	4588798	YPE_2440	YPE_2441			TRUE	0.891	70.000	0.444	1.000		NA
4588798	4588799	YPE_2441	YPE_2442			TRUE	0.743	115.000	0.286	1.000		NA
4588799	4588800	YPE_2442	YPE_2443			TRUE	0.703	22.000	0.000	NA		NA
4588800	4588801	YPE_2443	YPE_2444			FALSE	0.032	387.000	0.000	NA		NA
4588802	4588803	YPE_2445	YPE_2446			FALSE	0.015	743.000	0.000	NA		NA
4588803	4588804	YPE_2446	YPE_2447			TRUE	0.939	68.000	0.667	NA		NA
4588804	4588805	YPE_2447	YPE_2448			TRUE	0.924	81.000	0.667	NA		NA
4588805	4588806	YPE_2448	YPE_2449			TRUE	0.994	-3.000	0.012	0.002	Y	NA
4588806	4588807	YPE_2449	YPE_2451		gspF	TRUE	0.902	-13.000	0.000	NA		NA
4588807	4588809	YPE_2451	YPE_2452	gspF		TRUE	0.719	20.000	0.000	NA		NA
4588809	4588810	YPE_2452	YPE_2453			TRUE	0.993	5.000	0.087	0.002	Y	NA
4588810	4588811	YPE_2453	YPE_2454			TRUE	0.907	38.000	0.132	0.002		NA
4588811	4588812	YPE_2454	YPE_2455			TRUE	0.998	-7.000	0.569	0.002		NA
4588812	4588813	YPE_2455	YPE_2456			TRUE	0.996	9.000	0.461	1.000	Y	NA
4588813	4588814	YPE_2456	YPE_2457			TRUE	0.998	5.000	0.537	0.069	Y	NA
4588814	4588815	YPE_2457	YPE_2458			TRUE	0.934	-3.000	0.000	NA		NA
4588815	4588816	YPE_2458	YPE_2459			TRUE	0.664	26.000	0.000	NA		NA
4588818	4588819	YPE_2461	YPE_2462			TRUE	0.996	-3.000	0.500	NA		NA
4588819	4588820	YPE_2462	YPE_2463		cheD	FALSE	0.143	203.000	0.000	NA		NA
4588821	4588822	YPE_2464	YPE_2465			TRUE	0.585	113.000	0.157	1.000		NA
4588823	4588824	YPE_2466	YPE_2467			FALSE	0.014	369.000	0.000	1.000	N	NA
4588828	4588829	YPE_2471	YPE_2472	bisC	omrB	FALSE	0.084	248.000	0.000	NA		NA
4588829	4588830	YPE_2472	YPE_2473	omrB	aas	FALSE	0.266	107.000	0.000	NA		NA
4588830	4588831	YPE_2473	YPE_2474	aas		TRUE	0.976	-3.000	0.124	NA		NA
4588831	4588832	YPE_2474	YPE_2475			FALSE	0.207	167.000	0.000	NA		NA
4588833	4588834	YPE_2476	YPE_2477	tas	mutH	FALSE	0.009	335.000	0.015	1.000	N	NA
4588835	4588836	YPE_2478	YPE_2479			TRUE	0.934	-3.000	0.000	NA		NA
4588836	4588837	YPE_2479	YPE_2480		nudH	TRUE	0.581	26.000	0.008	NA		NA
4588837	4588838	YPE_2480	YPE_2481	nudH	ptsP	TRUE	0.406	13.000	0.012	1.000	N	NA
4588838	4588839	YPE_2481	YPE_2482	ptsP	lgt	FALSE	0.011	251.000	0.003	1.000	N	NA
4588839	4588840	YPE_2482	YPE_2483	lgt	thyA	TRUE	0.935	7.000	0.164	1.000	N	NA
4588840	4588841	YPE_2483	YPE_2484	thyA		TRUE	0.622	31.000	0.000	NA		NA
4588841	4588842	YPE_2484	YPE_2486N		ppdA	TRUE	0.902	-13.000	0.000	NA		NA
4588842	4588844	YPE_2486N	YPE_2487	ppdA		FALSE	0.304	87.000	0.000	NA		NA
4588844	4588845	YPE_2487	YPE_2488			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4588845	4588846	YPE_2488	YPE_2489			FALSE	0.224	61.000	0.000	1.000	N	NA
4588846	4588847	YPE_2489	YPE_2490			TRUE	0.788	44.000	0.000	0.002		NA
4588847	4588848	YPE_2490	YPE_2491			FALSE	0.012	5811.000	0.000	NA		NA
4588848	4588849	YPE_2491	YPE_2492			TRUE	0.934	-3.000	0.000	NA		NA
4588849	4588850	YPE_2492	YPE_2493			TRUE	0.991	-7.000	0.074	1.000	Y	NA
4588850	4588851	YPE_2493	YPE_2494			TRUE	0.908	-10.000	0.000	NA		NA
4588851	4588852	YPE_2494	YPE_2495			TRUE	0.924	0.000	0.000	NA		NA
4588852	4588853	YPE_2495	YPE_2496			TRUE	0.993	-7.000	0.000	0.005	Y	NA
4588854	4588855	YPE_2497	YPE_2498			FALSE	0.026	436.000	0.000	NA		NA
4588856	4588857	YPE_2499	YPE_2501	gntP		FALSE	0.014	1001.000	0.000	NA		NA
4588857	4588859	YPE_2501	YPE_2502			FALSE	0.018	586.000	0.000	NA		NA
4588859	4588860	YPE_2502	YPE_2503			TRUE	0.664	26.000	0.000	NA		NA
4588860	4588861	YPE_2503	YPE_2504			TRUE	0.789	14.000	0.000	1.000		NA
4588861	4588862	YPE_2504	YPE_2505			FALSE	0.065	275.000	0.000	NA		NA
4588862	4588863	YPE_2505	YPE_2506			FALSE	0.020	544.000	0.000	NA		NA
4588864	4588865	YPE_2507	YPE_2508			FALSE	0.025	282.000	0.000	1.000	N	NA
4588868	4588869	YPE_2511	YPE_2512			TRUE	0.939	54.000	0.167	1.000	Y	NA
4588870	4588871	YPE_2513	YPE_2515		pcpY	FALSE	0.082	250.000	0.000	NA		NA
4588873	4588874	YPE_2516	YPE_2517			FALSE	0.335	74.000	0.000	NA		NA
4588874	4588875	YPE_2517	YPE_2518			TRUE	0.934	-3.000	0.000	NA		NA
4588875	4588876	YPE_2518	YPE_2519			FALSE	0.143	203.000	0.000	NA		NA
4588876	4588877	YPE_2519	YPE_2520		lafU	FALSE	0.361	69.000	0.000	NA		NA
4588877	4588878	YPE_2520	YPE_2521	lafU	lafT	TRUE	0.999	0.000	0.846	1.000	Y	NA
4588878	4588879	YPE_2521	YPE_2522	lafT	lafS	TRUE	0.975	16.000	0.500	1.000	N	NA
4588879	4588880	YPE_2522	YPE_2523	lafS	lafF	TRUE	0.984	6.000	0.333	1.000		NA
4588880	4588881	YPE_2523	YPE_2524	lafF	lafE	TRUE	0.918	39.000	0.296	1.000		NA
4588881	4588882	YPE_2524	YPE_2525	lafE	lafD	TRUE	0.940	2.000	0.062	NA		NA
4588882	4588883	YPE_2525	YPE_2526	lafD	lafC	TRUE	0.933	2.000	0.054	NA		NA
4588883	4588884	YPE_2526	YPE_2527	lafC	lafB	TRUE	0.999	10.000	0.865	0.003	Y	NA
4588884	4588885	YPE_2527	YPE_2528	lafB	lafA3	TRUE	0.492	220.000	0.000	1.000	Y	NA
4588885	4588886	YPE_2528	YPE_2529	lafA3	lafA2	TRUE	0.486	283.000	0.000	0.002	Y	NA
4588886	4588887	YPE_2529	YPE_2530	lafA2	lafA	FALSE	0.236	515.000	0.000	0.002	Y	NA
4588888	4588889	YPE_2531	YPE_2532	lafZ		TRUE	0.917	104.000	0.714	NA		NA
4588890	4588891	YPE_2533	YPE_2534	lafW	lfgL	TRUE	0.991	12.000	0.667	NA		NA
4588891	4588892	YPE_2534	YPE_2535	lfgL	lfgK	TRUE	0.986	29.000	0.576	0.002		NA
4588892	4588893	YPE_2535	YPE_2536	lfgK	lfgJ	TRUE	0.839	113.000	0.457	NA		NA
4588893	4588894	YPE_2536	YPE_2537	lfgJ	lfgI	TRUE	0.986	10.000	0.457	NA		NA
4588894	4588895	YPE_2537	YPE_2538	lfgI	lfgH	TRUE	0.999	14.000	0.912	0.012	Y	NA
4588895	4588896	YPE_2538	YPE_2539	lfgH	lfgG	TRUE	0.997	35.000	0.941	0.009	Y	NA
4588896	4588897	YPE_2539	YPE_2540	lfgG	lfgF	FALSE	0.369	68.000	0.000	NA		NA
4588900	4588901	YPE_2543	YPE_2544	lfgE	lfgD	TRUE	0.993	55.000	0.970	NA	Y	NA
4588901	4588902	YPE_2544	YPE_2545	lfgD	lfgC	TRUE	0.999	3.000	0.914	NA	Y	NA
4588902	4588903	YPE_2545	YPE_2546	lfgC	lfgB	TRUE	1.000	3.000	0.972	0.006	Y	NA
4588904	4588905	YPE_2547	YPE_2548	lfgA	lfgM	FALSE	0.234	229.000	0.113	NA		NA
4588905	4588906	YPE_2548	YPE_2549	lfgM	lfgN	TRUE	0.995	7.000	0.585	0.003		NA
4588907	4588908	YPE_2550	YPE_2551	lfiJ	lfiI	TRUE	0.891	4.000	0.035	1.000		NA
4588908	4588909	YPE_2551	YPE_2552	lfiI	lfiH	TRUE	0.999	-7.000	0.816	1.000	Y	NA
4588909	4588910	YPE_2552	YPE_2553	lfiH	lfiG	TRUE	0.999	5.000	0.789	0.006	Y	NA
4588910	4588911	YPE_2553	YPE_2554	lfiG	lfiF	TRUE	1.000	-28.000	0.970	0.009	Y	NA
4588911	4588912	YPE_2554	YPE_2555	lfiF	lfiE	TRUE	0.999	10.000	1.000	0.009	Y	NA
4588912	4588913	YPE_2555	YPE_2556	lfiE	lafK	TRUE	0.978	17.000	0.576	1.000	N	NA
4588914	4588915	YPE_2557	YPE_2558	lfiM	lfiN	TRUE	0.970	-7.000	0.123	NA		NA
4588915	4588916	YPE_2558	YPE_2559	lfiN	lfiP	TRUE	0.999	-3.000	0.368	0.089	Y	NA
4588916	4588917	YPE_2559	YPE_2560	lfiP	lfiQ	TRUE	0.998	2.000	0.263	0.012	Y	NA
4588917	4588918	YPE_2560	YPE_2561	lfiQ	lfiR	TRUE	0.998	1.000	0.281	0.003	Y	NA
4588918	4588919	YPE_2561	YPE_2562	lfiR	lfhB	TRUE	1.000	0.000	1.000	0.089	Y	NA
4588919	4588920	YPE_2562	YPE_2564	lfhB	lfhA	TRUE	0.902	-13.000	0.000	NA		NA
4588920	4588922	YPE_2564	YPE_2565	lfhA		FALSE	0.128	212.000	0.000	NA		NA
4588925	4588926	YPE_2568	YPE_2569			TRUE	0.937	25.000	0.000	1.000	Y	NA
4588926	4588927	YPE_2569	YPE_2570			TRUE	0.952	18.000	0.000	1.000	Y	NA
4588927	4588928	YPE_2570	YPE_2571		tnp	FALSE	0.016	353.000	0.000	1.000	N	NA
4588928	4588929	YPE_2571	YPE_2572	tnp	tnp	TRUE	0.507	252.000	0.000	0.025	Y	NA
4588930	4588931	YPE_2573	YPE_2574	tadV	rcpC	TRUE	0.845	52.000	0.222	NA		NA
4588931	4588932	YPE_2574	YPE_2576	rcpC	rcpA	TRUE	0.934	-3.000	0.000	NA		NA
4588932	4588934	YPE_2576	YPE_2577	rcpA	tadZ	FALSE	0.054	298.000	0.000	NA		NA
4588934	4588935	YPE_2577	YPE_2578	tadZ	tadA	TRUE	0.998	12.000	0.727	NA	Y	NA
4588935	4588936	YPE_2578	YPE_2579	tadA	tadB	TRUE	0.999	-3.000	0.800	1.000	Y	NA
4588936	4588937	YPE_2579	YPE_2580	tadB	tadC	TRUE	1.000	-3.000	0.909	0.012	Y	NA
4588937	4588938	YPE_2580	YPE_2581	tadC	tadD	TRUE	0.996	-16.000	0.273	1.000	Y	NA
4588938	4588939	YPE_2581	YPE_2582	tadD	tadE	TRUE	0.988	0.000	0.000	NA	Y	NA
4588939	4588940	YPE_2582	YPE_2583	tadE	tadF	TRUE	0.899	-16.000	0.000	NA		NA
4588940	4588941	YPE_2583	YPE_2584	tadF	tadG	TRUE	0.972	25.000	0.500	NA		NA
4588942	4588943	YPE_2585	YPE_2586	exbD	exbB	TRUE	0.999	4.000	0.810	0.071	Y	NA
4588944	4588945	YPE_2587	YPE_2588	metC		TRUE	0.514	193.000	0.212	NA		NA
4588950	4588952	YPE_2593	YPE_2595	ygiQ	sufI	FALSE	0.050	308.000	0.000	NA		NA
4588952	4588953	YPE_2595	YPE_2596	sufI	plsC	FALSE	0.367	179.000	0.154	1.000	N	NA
4588953	4588954	YPE_2596	YPE_2597	plsC	parC	FALSE	0.031	289.000	0.043	1.000	N	NA
4588956	4588957	YPE_2599	YPE_2600		parE	TRUE	0.654	4.000	0.022	1.000	N	NA
4588957	4588958	YPE_2600	YPE_2601	parE		TRUE	0.679	102.000	0.217	NA		NA
4588958	4588959	YPE_2601	YPE_2602		cpdA	TRUE	0.995	-3.000	0.427	NA		NA
4588959	4588960	YPE_2602	YPE_2603	cpdA		TRUE	0.863	82.000	0.433	NA		NA
4588960	4588961	YPE_2603	YPE_2604			TRUE	0.955	34.000	0.443	NA		NA
4588964	4588965	YPE_2607	YPE_2608			TRUE	0.991	10.000	0.632	NA		NA
4588966	4588967	YPE_2609	YPE_2610	ygiD	ribB	FALSE	0.032	459.000	0.048	1.000		NA
4588967	4588968	YPE_2610	YPE_2611	ribB		FALSE	0.213	162.000	0.000	NA		NA
4588970	4588971	YPE_2613	YPE_2614	asoB	rfaE	FALSE	0.198	37.000	0.012	1.000	N	NA
4588971	4588972	YPE_2614	YPE_2615	rfaE	glnE	FALSE	0.260	135.000	0.083	1.000	N	NA
4588972	4588973	YPE_2615	YPE_2616	glnE		FALSE	0.264	171.000	0.053	1.000		NA
4588974	4588975	YPE_2617	YPE_2618		cca	FALSE	0.280	160.000	0.106	NA	N	NA
4588976	4588977	YPE_2619	YPE_2620	bacA	folB	FALSE	0.123	274.000	0.128	1.000	N	NA
4588980	4588981	YPE_2623	YPE_2624	rpsU	dnaG	FALSE	0.213	136.000	0.067	1.000	N	NA
4588981	4588982	YPE_2624	YPE_2625	dnaG	rpoD	TRUE	0.632	158.000	0.299	1.000	N	NA
4588982	4588983	YPE_2625	YPE_2626	rpoD		FALSE	0.157	196.000	0.000	NA		NA
4588984	4588985	YPE_2627	YPE_2628			FALSE	0.155	197.000	0.000	NA		NA
4588985	4588986	YPE_2628	YPE_2629			TRUE	0.742	17.000	0.000	NA		NA
4588986	4588987	YPE_2629	YPE_2630			FALSE	0.324	78.000	0.000	NA		NA
4588987	4588988	YPE_2630	YPE_2631			TRUE	0.831	9.000	0.000	NA		NA
4588988	4588989	YPE_2631	YPE_2632			FALSE	0.264	126.000	0.000	1.000		NA
4588989	4588990	YPE_2632	YPE_2633			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4588990	4588991	YPE_2633	YPE_2634			FALSE	0.209	165.000	0.000	NA		NA
4588992	4588993	YPE_2635	YPE_2636			FALSE	0.154	198.000	0.000	NA		NA
4588995	4588996	YPE_2638	YPE_2639			FALSE	0.073	260.000	0.000	NA		NA
4588997	4588998	YPE_2640	YPE_2641			FALSE	0.309	285.000	0.000	NA	Y	NA
4588998	4588999	YPE_2641	YPE_2642			TRUE	0.752	16.000	0.000	NA		NA
4588999	4589000	YPE_2642	YPE_2643			FALSE	0.203	170.000	0.000	NA		NA
4589000	4589001	YPE_2643	YPE_2644			TRUE	0.882	4.000	0.000	NA		NA
4589001	4589002	YPE_2644	YPE_2645			TRUE	0.979	-7.000	0.222	1.000	N	NA
4589003	4589004	YPE_2646	YPE_2647			FALSE	0.197	173.000	0.000	NA		NA
4589004	4589005	YPE_2647	YPE_2648			TRUE	0.854	6.000	0.000	NA		NA
4589005	4589006	YPE_2648	YPE_2649			TRUE	0.994	10.000	0.778	NA		NA
4589006	4589007	YPE_2649	YPE_2650			TRUE	0.939	116.000	0.889	NA		NA
4589007	4589008	YPE_2650	YPE_2651			TRUE	0.995	5.000	0.750	NA		NA
4589009	4589010	YPE_2652	YPE_2653			TRUE	0.914	51.000	0.375	NA		NA
4589010	4589011	YPE_2653	YPE_2654			TRUE	0.951	30.000	0.375	NA		NA
4589011	4589012	YPE_2654	YPE_2655			TRUE	0.996	0.000	0.105	0.056	Y	NA
4589012	4589013	YPE_2655	YPE_2656			TRUE	0.993	54.000	0.733	0.056	Y	NA
4589013	4589014	YPE_2656	YPE_2657			FALSE	0.375	77.000	0.089	1.000	N	NA
4589014	4589015	YPE_2657	YPE_2658			FALSE	0.261	109.000	0.073	1.000	N	NA
4589015	4589016	YPE_2658	YPE_2659			TRUE	0.760	83.000	0.030	1.000	Y	NA
4589017	4589018	YPE_2660	YPE_2661			FALSE	0.221	102.000	0.016	NA		NA
4589018	4589019	YPE_2661	YPE_2662		yapF	TRUE	0.452	60.000	0.000	1.000		NA
4589020	4589021	YPE_2663	YPE_2664			FALSE	0.317	81.000	0.000	NA		NA
4589021	4589022	YPE_2664	YPE_2665			FALSE	0.069	266.000	0.000	NA		NA
4589022	4589023	YPE_2665	YPE_2666			TRUE	0.934	-3.000	0.000	NA		NA
4589023	4589024	YPE_2666	YPE_2667			TRUE	0.882	45.000	0.000	NA	Y	NA
4589025	4589026	YPE_2668	YPE_2669	terY	terX	TRUE	0.887	33.000	0.200	NA		NA
4589026	4589027	YPE_2669	YPE_2670	terX		TRUE	0.976	2.000	0.164	NA		NA
4589027	4589028	YPE_2670	YPE_2671			TRUE	0.924	102.000	0.750	NA		NA
4589028	4589029	YPE_2671	YPE_2672			TRUE	0.967	56.000	0.789	NA		NA
4589029	4589030	YPE_2672	YPE_2673			TRUE	0.960	32.000	0.452	1.000		NA
4589032	4589033	YPE_2675	YPE_2676		fadH	FALSE	0.135	213.000	0.000	1.000		NA
4589035	4589036	YPE_2678	YPE_2679	yapG		FALSE	0.096	239.000	0.000	NA		NA
4589036	4589037	YPE_2679	YPE_2680			FALSE	0.224	203.000	0.072	NA		NA
4589037	4589038	YPE_2680	YPE_2681		sstT	FALSE	0.022	523.000	0.000	1.000		NA
4589038	4589039	YPE_2681	YPE_2682	sstT	tnp	FALSE	0.064	201.000	0.000	1.000	N	NA
4589040	4589041	YPE_2683	YPE_2684		uxaA	TRUE	0.462	153.000	0.126	NA		NA
4589041	4589042	YPE_2684	YPE_2685	uxaA	uxaB	TRUE	0.983	11.000	0.126	1.000	Y	NA
4589042	4589043	YPE_2685	YPE_2686	uxaB	uxaC	TRUE	0.668	199.000	0.095	1.000	Y	NA
4589043	4589044	YPE_2686	YPE_2687	uxaC		FALSE	0.020	531.000	0.000	NA		NA
4589045	4589046	YPE_2688	YPE_2689	exuT	exuR	TRUE	0.443	263.000	0.433	1.000	N	NA
4589046	4589047	YPE_2689	YPE_2690	exuR		FALSE	0.107	228.000	0.000	NA		NA
4589047	4589048	YPE_2690	YPE_2691			FALSE	0.064	278.000	0.000	NA		NA
4589048	4589049	YPE_2691	YPE_2692			TRUE	0.974	-3.000	0.118	NA		NA
4589049	4589050	YPE_2692	YPE_2693			TRUE	0.775	226.000	0.684	NA		NA
4589050	4589051	YPE_2693	YPE_2694			TRUE	0.882	4.000	0.000	NA		NA
4589051	4589052	YPE_2694	YPE_2695			TRUE	0.866	5.000	0.000	NA		NA
4589052	4589053	YPE_2695	YPE_2696			TRUE	0.977	3.000	0.185	NA		NA
4589053	4589054	YPE_2696	YPE_2697			TRUE	0.985	-3.000	0.185	NA		NA
4589054	4589055	YPE_2697	YPE_2698			FALSE	0.152	331.000	0.161	NA		NA
4589055	4589056	YPE_2698	YPE_2700N		yqjG	FALSE	0.306	86.000	0.000	NA		NA
4589056	4589058	YPE_2700N	YPE_2701	yqjG		FALSE	0.308	85.000	0.000	NA		NA
4589058	4589059	YPE_2701	YPE_2702			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4589060	4589061	YPE_2703	YPE_2704	mutT	secA	FALSE	0.008	295.000	0.003	1.000	N	NA
4589061	4589062	YPE_2704	YPE_2705	secA		TRUE	0.447	78.000	0.065	1.000		NA
4589064	4589065	YPE_2707	YPE_2708	lpxC	ftsZ	TRUE	0.486	85.000	0.134	1.000	N	NA
4589065	4589066	YPE_2708	YPE_2709	ftsZ	ftsA	TRUE	0.965	73.000	0.460	1.000	Y	NA
4589066	4589067	YPE_2709	YPE_2710	ftsA	ftsQ	TRUE	0.942	27.000	0.389	NA	N	NA
4589067	4589068	YPE_2710	YPE_2711	ftsQ	ddlB	TRUE	0.998	2.000	0.372	NA	Y	NA
4589068	4589069	YPE_2711	YPE_2712	ddlB	murC	TRUE	0.997	-7.000	0.153	0.003	Y	NA
4589069	4589070	YPE_2712	YPE_2713	murC	murG	TRUE	0.901	138.000	0.283	1.000	Y	NA
4589070	4589071	YPE_2713	YPE_2714	murG	ftsW	TRUE	0.996	-3.000	0.647	1.000	N	NA
4589071	4589072	YPE_2714	YPE_2715	ftsW	murD	TRUE	0.993	0.000	0.297	0.003	N	NA
4589072	4589073	YPE_2715	YPE_2716	murD	mraY	TRUE	0.999	3.000	0.647	0.003	Y	NA
4589073	4589074	YPE_2716	YPE_2717	mraY	murF	TRUE	0.999	-6.000	0.309	0.003	Y	NA
4589074	4589075	YPE_2717	YPE_2718	murF	murE	TRUE	0.999	-3.000	0.569	0.002	Y	NA
4589075	4589076	YPE_2718	YPE_2719	murE	ftsI	TRUE	0.989	2.000	0.059	1.000	Y	NA
4589076	4589077	YPE_2719	YPE_2720	ftsI	ftsL	TRUE	0.538	66.000	0.124	1.000	N	NA
4589077	4589078	YPE_2720	YPE_2721	ftsL		TRUE	0.984	-3.000	0.227	1.000	N	NA
4589078	4589079	YPE_2721	YPE_2722			TRUE	0.995	3.000	0.635	NA		NA
4589083	4589084	YPE_2726	YPE_2727	tnp	ilvH	FALSE	0.066	199.000	0.000	1.000	N	NA
4589084	4589085	YPE_2727	YPE_2728	ilvH	ilvI	TRUE	0.999	3.000	0.371	0.002	Y	NA
4589085	4589086	YPE_2728	YPE_2729	ilvI		FALSE	0.047	319.000	0.000	NA		NA
4589086	4589087	YPE_2729	YPE_2730			TRUE	0.622	31.000	0.000	NA		NA
4589087	4589088	YPE_2730	YPE_2731			TRUE	0.934	-3.000	0.000	NA		NA
4589088	4589089	YPE_2731	YPE_2732		leuO	FALSE	0.043	334.000	0.000	NA		NA
4589090	4589091	YPE_2733	YPE_2734	tnp	leuA	FALSE	0.103	147.000	0.000	1.000	N	NA
4589091	4589092	YPE_2734	YPE_2735	leuA	leuB	TRUE	0.997	-3.000	0.126	0.001	Y	NA
4589092	4589093	YPE_2735	YPE_2736	leuB	leuC	TRUE	0.998	2.000	0.275	0.001	Y	NA
4589093	4589094	YPE_2736	YPE_2737	leuC	leuD	TRUE	0.995	15.000	0.309	0.001	Y	NA
4589097	4589098	YPE_2739	YPE_2740			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4589102	4589103	YPE_2745	YPE_2746	tbpA	thiP	TRUE	0.986	24.000	0.697	0.070	N	NA
4589103	4589104	YPE_2746	YPE_2747	thiP	thiQ	TRUE	0.987	14.000	0.522	0.015	N	NA
4589106	4589107	YPE_2749	YPE_2750	polB	hepA	FALSE	0.296	461.000	0.098	0.076	Y	NA
4589108	4589109	YPE_2751	YPE_2752			TRUE	0.992	22.000	1.000	NA		NA
4589109	4589110	YPE_2752	YPE_2753			TRUE	0.956	50.000	0.615	NA		NA
4589110	4589111	YPE_2753	YPE_2754			TRUE	0.934	-3.000	0.000	NA		NA
4589111	4589112	YPE_2754	YPE_2755			FALSE	0.255	120.000	0.000	NA		NA
4589112	4589113	YPE_2755	YPE_2756			TRUE	0.997	-7.000	0.667	NA		NA
4589113	4589114	YPE_2756	YPE_2757			TRUE	0.854	6.000	0.000	NA		NA
4589114	4589115	YPE_2757	YPE_2758			TRUE	0.918	-7.000	0.000	NA		NA
4589115	4589116	YPE_2758	YPE_2759			TRUE	0.664	26.000	0.000	NA		NA
4589116	4589117	YPE_2759	YPE_2760			TRUE	0.676	25.000	0.000	NA		NA
4589117	4589118	YPE_2760	YPE_2761			TRUE	0.789	13.000	0.000	NA		NA
4589118	4589119	YPE_2761	YPE_2762			FALSE	0.270	104.000	0.000	NA		NA
4589119	4589120	YPE_2762	YPE_2763			TRUE	0.991	3.000	0.400	NA		NA
4589120	4589121	YPE_2763	YPE_2764			TRUE	0.995	-7.000	0.533	NA		NA
4589121	4589122	YPE_2764	YPE_2765			TRUE	0.967	33.000	0.533	NA		NA
4589122	4589123	YPE_2765	YPE_2766			TRUE	0.938	74.000	0.714	NA		NA
4589123	4589124	YPE_2766	YPE_2767			TRUE	0.819	163.000	0.500	NA		NA
4589124	4589125	YPE_2767	YPE_2768			TRUE	0.997	0.000	0.700	NA		NA
4589125	4589126	YPE_2768	YPE_2769			TRUE	0.996	11.000	1.000	NA		NA
4589127	4589128	YPE_2770	YPE_2771		rluA	FALSE	0.013	1223.000	0.000	NA		NA
4589130	4589131	YPE_2773	YPE_2774	imp	surA	TRUE	0.648	68.000	0.182	1.000	N	NA
4589131	4589132	YPE_2774	YPE_2775	surA	pdxA	TRUE	0.993	-16.000	0.561	1.000	N	NA
4589132	4589133	YPE_2775	YPE_2776	pdxA	ksgA	TRUE	0.975	-7.000	0.197	1.000	N	NA
4589133	4589134	YPE_2776	YPE_2777	ksgA	apaG	TRUE	0.770	14.000	0.078	NA	N	NA
4589134	4589135	YPE_2777	YPE_2778	apaG	apaH	TRUE	0.936	17.000	0.267	NA	N	NA
4589136	4589137	YPE_2779	YPE_2780			FALSE	0.248	127.000	0.000	NA		NA
4589137	4589138	YPE_2780	YPE_2781		tnp	FALSE	0.020	535.000	0.000	NA		NA
4589138	4589139	YPE_2781	YPE_2782	tnp	folA	FALSE	0.054	212.000	0.000	1.000	N	NA
4589139	4589140	YPE_2782	YPE_2783	folA		TRUE	0.410	150.000	0.104	NA		NA
4589140	4589141	YPE_2783	YPE_2784			TRUE	0.998	-3.000	0.704	NA		NA
4589143	4589144	YPE_2786	YPE_2787	carB	carA	TRUE	0.996	16.000	0.345	0.001	Y	NA
4589144	4589145	YPE_2787	YPE_2788	carA	dapB	FALSE	0.146	473.000	0.034	1.000	Y	NA
4589145	4589146	YPE_2788	YPE_2789	dapB	tnp	FALSE	0.010	453.000	0.000	1.000	N	NA
4589146	4589147	YPE_2789	YPE_2790	tnp		FALSE	0.170	189.000	0.000	NA		NA
4589147	4589148	YPE_2790	YPE_2791			TRUE	0.641	29.000	0.000	NA		NA
4589148	4589149	YPE_2791	YPE_2792		fkpB	TRUE	0.994	-19.000	0.626	1.000	N	NA
4589149	4589150	YPE_2792	YPE_2793	fkpB	lspA	TRUE	0.596	68.000	0.154	1.000	N	NA
4589150	4589151	YPE_2793	YPE_2794	lspA	ileS	TRUE	0.866	0.000	0.045	1.000	N	NA
4589151	4589152	YPE_2794	YPE_2795	ileS	ribF	TRUE	0.889	32.000	0.254	1.000	N	NA
4589153	4589154	YPE_2796	YPE_2797		rpsT	TRUE	0.703	22.000	0.000	NA		NA
4589155	4589156	YPE_2798	YPE_2799	nhaR	nhaA	TRUE	0.660	130.000	0.292	1.000	N	NA
4589156	4589157	YPE_2799	YPE_2800	nhaA	dnaJ	FALSE	0.025	243.000	0.022	1.000	N	NA
4589157	4589158	YPE_2800	YPE_2801	dnaJ	dnaK	TRUE	0.943	112.000	0.236	0.002	Y	NA
4589159	4589160	YPE_2802	YPE_2803	yaaH		FALSE	0.064	289.000	0.000	1.000		NA
4589161	4589162	YPE_2804	YPE_2805		mog	FALSE	0.129	128.000	0.039	1.000	N	NA
4589162	4589163	YPE_2805	YPE_2806	mog	talB	FALSE	0.030	288.000	0.042	1.000	N	NA
4589165	4589166	YPE_2808	YPE_2809	thrC	thrB	TRUE	0.995	4.000	0.233	1.000	Y	NA
4589166	4589167	YPE_2809	YPE_2810	thrB	thrA	TRUE	0.992	3.000	0.133	1.000	Y	NA
4589173	4589174	YPE_2816	YPE_2817	trpR	slt	FALSE	0.200	251.000	0.167	1.000	N	NA
4589175	4589176	YPE_2818	YPE_2819			FALSE	0.034	375.000	0.000	NA		NA
4589176	4589177	YPE_2819	YPE_2820			TRUE	0.946	21.000	0.259	NA		NA
4589177	4589178	YPE_2820	YPE_2821			TRUE	0.972	6.000	0.290	1.000	N	NA
4589178	4589179	YPE_2821	YPE_2823		yjjK	FALSE	0.181	183.000	0.000	NA		NA
4589181	4589182	YPE_2824	YPE_2825		nadR	FALSE	0.232	157.000	0.000	1.000		NA
4589182	4589183	YPE_2825	YPE_2826	nadR	radA	FALSE	0.064	159.000	0.021	1.000	N	NA
4589183	4589184	YPE_2826	YPE_2827	radA	serB	FALSE	0.109	88.000	0.024	1.000	N	NA
4589186	4589187	YPE_2829	YPE_2830	deoD	deoB	TRUE	0.762	125.000	0.414	1.000	N	NA
4589187	4589188	YPE_2830	YPE_2831	deoB	deoA	FALSE	0.242	132.000	0.000	NA		NA
4589188	4589190	YPE_2831	YPE_2833	deoA	deoC	FALSE	0.254	121.000	0.000	NA		NA
4589190	4589191	YPE_2833	YPE_2834	deoC		FALSE	0.119	568.000	0.000	1.000	Y	NA
4589191	4589192	YPE_2834	YPE_2835			FALSE	0.005	535.000	0.027	NA	N	NA
4589192	4589193	YPE_2835	YPE_2836			TRUE	0.660	37.000	0.057	NA		NA
4589193	4589194	YPE_2836	YPE_2837			TRUE	0.730	74.000	0.211	NA		NA
4589194	4589195	YPE_2837	YPE_2838		osmY	TRUE	0.466	167.000	0.140	NA		NA
4589195	4589196	YPE_2838	YPE_2839	osmY	prfC	FALSE	0.045	327.000	0.000	NA		NA
4589196	4589197	YPE_2839	YPE_2840	prfC	rimI	FALSE	0.181	179.000	0.026	1.000		NA
4589197	4589198	YPE_2840	YPE_2841	rimI	holD	TRUE	0.960	-55.000	0.121	1.000		NA
4589199	4589200	YPE_2842	YPE_2843	rsmC		FALSE	0.075	257.000	0.000	NA		NA
4589204	4589205	YPE_2847	YPE_2848			TRUE	0.799	147.000	0.429	NA		NA
4589206	4589207	YPE_2849	YPE_2850			TRUE	0.974	0.000	0.185	NA	N	NA
4589207	4589208	YPE_2850	YPE_2851			TRUE	0.481	52.000	0.000	NA		NA
4589208	4589209	YPE_2851	YPE_2852			TRUE	0.656	27.000	0.000	NA		NA
4589209	4589210	YPE_2852	YPE_2853			FALSE	0.018	586.000	0.000	NA		NA
4589210	4589211	YPE_2853	YPE_2854			TRUE	0.922	48.000	0.105	NA	Y	NA
4589211	4589212	YPE_2854	YPE_2855		lsrK	FALSE	0.009	469.000	0.000	1.000	N	NA
4589212	4589213	YPE_2855	YPE_2856	lsrK	lsrR	FALSE	0.201	171.000	0.000	NA		NA
4589215	4589216	YPE_2858	YPE_2859	lsrA	lsrC	TRUE	1.000	-6.000	0.818	0.012	Y	NA
4589216	4589217	YPE_2859	YPE_2860	lsrC	lsrD	TRUE	1.000	-3.000	0.788	0.012	Y	NA
4589217	4589218	YPE_2860	YPE_2861	lsrD	lsrB	TRUE	0.988	66.000	0.844	NA	Y	NA
4589218	4589219	YPE_2861	YPE_2862	lsrB	lsrF	TRUE	0.879	56.000	0.062	NA	Y	NA
4589219	4589220	YPE_2862	YPE_2863	lsrF	lsrG	FALSE	0.400	64.000	0.028	1.000		NA
4589220	4589221	YPE_2863	YPE_2864	lsrG		FALSE	0.053	301.000	0.000	NA		NA
4589223	4589224	YPE_2866	YPE_2867	frwC	frwB	TRUE	0.765	341.000	0.400	0.006	Y	NA
4589224	4589225	YPE_2867	YPE_2868	frwB	frwD	TRUE	0.847	93.000	0.000	0.006	Y	NA
4589226	4589227	YPE_2869	YPE_2870			TRUE	0.918	2.000	0.000	1.000		NA
4589228	4589229	YPE_2871	YPE_2872			TRUE	0.990	11.000	0.637	NA		NA
4589230	4589231	YPE_2873	YPE_2874			TRUE	0.958	-3.000	0.068	NA		NA
4589233	4589234	YPE_2876	YPE_2877			FALSE	0.262	110.000	0.000	NA		NA
4589234	4589235	YPE_2877	YPE_2878			TRUE	0.510	50.000	0.000	1.000		NA
4589235	4589236	YPE_2878	YPE_2879			TRUE	0.789	13.000	0.000	NA		NA
4589236	4589237	YPE_2879	YPE_2880			FALSE	0.085	247.000	0.000	NA		NA
4589237	4589238	YPE_2880	YPE_2881			FALSE	0.376	67.000	0.000	NA		NA
4589238	4589239	YPE_2881	YPE_2882			TRUE	0.999	-3.000	0.759	NA	Y	NA
4589240	4589241	YPE_2883	YPE_2884			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4589241	4589242	YPE_2884	YPE_2885			FALSE	0.042	340.000	0.000	NA		NA
4589243	4589244	YPE_2886	YPE_2887	aidB		FALSE	0.004	408.000	0.005	1.000	N	NA
4589244	4589245	YPE_2887	YPE_2888		rnr	TRUE	0.619	119.000	0.147	0.013	N	NA
4589245	4589246	YPE_2888	YPE_2889	rnr		TRUE	0.426	241.000	0.038	NA	Y	NA
4589246	4589247	YPE_2889	YPE_2890		purA	FALSE	0.004	369.000	0.010	NA	N	NA
4589247	4589248	YPE_2890	YPE_2891	purA		FALSE	0.331	100.000	0.051	NA		NA
4589248	4589249	YPE_2891	YPE_2892		hflC	TRUE	0.722	172.000	0.348	NA		NA
4589249	4589250	YPE_2892	YPE_2893	hflC	hflK	TRUE	0.999	4.000	0.947	0.013	Y	NA
4589250	4589251	YPE_2893	YPE_2894	hflK	hflX	TRUE	0.445	241.000	0.184	0.066		NA
4589251	4589252	YPE_2894	YPE_2895	hflX	hfq	TRUE	0.578	99.000	0.141	1.000		NA
4589252	4589253	YPE_2895	YPE_2896	hfq	miaA	TRUE	0.869	116.000	0.531	1.000		NA
4589253	4589254	YPE_2896	YPE_2897	miaA	mutL	TRUE	0.983	-7.000	0.188	0.092	N	NA
4589254	4589255	YPE_2897	YPE_2898	mutL	amiB	TRUE	0.793	16.000	0.092	1.000	N	NA
4589255	4589256	YPE_2898	YPE_2899	amiB		TRUE	0.432	140.000	0.109	NA		NA
4589256	4589257	YPE_2899	YPE_2900			TRUE	0.921	11.000	0.118	NA		NA
4589259	4589260	YPE_2902	YPE_2903		orn	FALSE	0.019	558.000	0.000	NA		NA
4589261	4589262	YPE_2904	YPE_2905		psd	FALSE	0.100	325.000	0.095	1.000		NA
4589262	4589263	YPE_2905	YPE_2906	psd		TRUE	0.840	24.000	0.148	1.000	N	NA
4589264	4589265	YPE_2907	YPE_2908			FALSE	0.215	160.000	0.000	NA		NA
4589266	4589267	YPE_2909	YPE_2910	frdA	frdB	TRUE	0.999	-7.000	0.470	0.004	Y	NA
4589267	4589268	YPE_2910	YPE_2911	frdB	frdC	TRUE	0.996	17.000	0.454	0.004	Y	NA
4589268	4589269	YPE_2911	YPE_2912	frdC	frdD	TRUE	0.998	17.000	0.787	0.004	Y	NA
4589269	4589270	YPE_2912	YPE_2913	frdD	tnp	FALSE	0.066	198.000	0.000	1.000	N	NA
4589271	4589272	YPE_2914	YPE_2915	sugE	efp	FALSE	0.035	247.000	0.000	1.000	N	NA
4589274	4589275	YPE_2917	YPE_2918		mopA	FALSE	0.017	636.000	0.000	NA		NA
4589275	4589276	YPE_2918	YPE_2919	mopA	groES	TRUE	0.993	47.000	0.631	0.005	Y	NA
4589276	4589277	YPE_2919	YPE_2920	groES		FALSE	0.089	255.000	0.040	1.000		NA
4589278	4589279	YPE_2921	YPE_2922	aspA	dcuA	FALSE	0.238	120.000	0.023	1.000		NA
4589279	4589280	YPE_2922	YPE_2923	dcuA	cutA	FALSE	0.141	185.000	0.007	1.000		NA
4589280	4589281	YPE_2923	YPE_2924	cutA	dsbD	TRUE	0.914	-24.000	0.092	1.000	N	NA
4589282	4589283	YPE_2925	YPE_2926	fdhF	hydN	TRUE	0.968	23.000	0.231	0.002		NA
4589283	4589284	YPE_2926	YPE_2927	hydN		TRUE	0.948	23.000	0.222	0.010	N	NA
4589285	4589286	YPE_2928	YPE_2929			FALSE	0.227	145.000	0.000	NA		NA
4589287	4589288	YPE_2930	YPE_2931			TRUE	0.633	30.000	0.000	NA		NA
4589292	4589293	YPE_2935	YPE_2936	rhaR	rhaS	TRUE	0.983	133.000	0.800	0.027	Y	NA
4589293	4589294	YPE_2936	YPE_2937	rhaS		FALSE	0.115	222.000	0.000	NA		NA
4589295	4589296	YPE_2938	YPE_2939	rhaB	rhaA	TRUE	0.998	-3.000	0.387	1.000	Y	NA
4589296	4589297	YPE_2939	YPE_2940	rhaA	rhaD	TRUE	0.990	13.000	0.247	1.000	Y	NA
4589297	4589298	YPE_2940	YPE_2941	rhaD		TRUE	0.548	67.000	0.041	0.005	N	NA
4589298	4589299	YPE_2941	YPE_2942			TRUE	0.842	14.000	0.063	NA		NA
4589302	4589303	YPE_2945	YPE_2946		tyrB	FALSE	0.020	527.000	0.000	NA		NA
4589303	4589304	YPE_2946	YPE_2947	tyrB	alr	FALSE	0.399	186.000	0.181	1.000	N	NA
4589304	4589305	YPE_2947	YPE_2948	alr	dnaB	TRUE	0.726	97.000	0.317	1.000	N	NA
4589307	4589308	YPE_2950	YPE_2951	pspG	dusA	FALSE	0.036	507.000	0.070	NA		NA
4589310	4589311	YPE_2953	YPE_2954	lexA	dgkA	TRUE	0.426	125.000	0.141	1.000	N	NA
4589313	4589314	YPE_2956	YPE_2957	ubiA	ubiC	TRUE	0.869	166.000	0.248	NA	Y	NA
4589316	4589317	YPE_2959	YPE_2960			FALSE	0.044	332.000	0.000	NA		NA
4589317	4589318	YPE_2960	YPE_2961			FALSE	0.027	423.000	0.000	NA		NA
4589318	4589319	YPE_2961	YPE_2962			FALSE	0.014	1112.000	0.000	NA		NA
4589319	4589320	YPE_2962	YPE_2963			TRUE	0.837	8.000	0.000	NA		NA
4589320	4589321	YPE_2963	YPE_2964			TRUE	0.974	72.000	0.571	NA	Y	NA
4589321	4589322	YPE_2964	YPE_2965			FALSE	0.081	251.000	0.000	NA		NA
4589322	4589323	YPE_2965	YPE_2966		terE	FALSE	0.016	713.000	0.000	NA		NA
4589323	4589324	YPE_2966	YPE_2967	terE	terD	TRUE	0.928	184.000	0.310	0.003	Y	NA
4589324	4589325	YPE_2967	YPE_2968	terD	terC	FALSE	0.209	64.000	0.000	1.000	N	NA
4589325	4589326	YPE_2968	YPE_2969	terC	terB	TRUE	0.942	22.000	0.000	NA	Y	NA
4589326	4589327	YPE_2969	YPE_2970	terB	terA	TRUE	0.887	33.000	0.200	NA		NA
4589327	4589328	YPE_2970	YPE_2971	terA	terZ	TRUE	0.547	132.000	0.054	0.003		NA
4589329	4589330	YPE_2972	YPE_2973			TRUE	0.959	12.000	0.217	1.000		NA
4589330	4589331	YPE_2973	YPE_2974			TRUE	0.971	-7.000	0.126	NA		NA
4589331	4589332	YPE_2974	YPE_2975			TRUE	0.990	-7.000	0.296	NA		NA
4589332	4589333	YPE_2975	YPE_2976			TRUE	0.994	0.000	0.420	NA		NA
4589333	4589334	YPE_2976	YPE_2977			FALSE	0.030	397.000	0.000	NA		NA
4589334	4589335	YPE_2977	YPE_2978			FALSE	0.047	315.000	0.000	NA		NA
4589335	4589336	YPE_2978	YPE_2979			FALSE	0.017	341.000	0.000	1.000	N	NA
4589336	4589337	YPE_2979	YPE_2980			TRUE	0.968	-3.000	0.135	1.000	N	NA
4589337	4589338	YPE_2980	YPE_2981			TRUE	0.502	34.000	0.054	1.000	N	NA
4589338	4589339	YPE_2981	YPE_2982		hmuR	FALSE	0.011	415.000	0.000	1.000	N	NA
4589339	4589340	YPE_2982	YPE_2983	hmuR	hmuS	TRUE	0.756	119.000	0.064	1.000	Y	NA
4589340	4589341	YPE_2983	YPE_2984	hmuS	hmuT	TRUE	0.998	-3.000	0.384	1.000	Y	NA
4589341	4589342	YPE_2984	YPE_2985	hmuT	hmuU	TRUE	0.999	-3.000	0.852	1.000	Y	NA
4589342	4589343	YPE_2985	YPE_2986	hmuU	hmuV	TRUE	0.996	-7.000	0.220	1.000	Y	NA
4589344	4589345	YPE_2987	YPE_2988			TRUE	0.887	46.000	0.043	NA	Y	NA
4589347	4589348	YPE_2990	YPE_2991			TRUE	0.998	-3.000	0.844	NA		NA
4589348	4589349	YPE_2991	YPE_2992			FALSE	0.038	383.000	0.045	NA		NA
4589349	4589350	YPE_2992	YPE_2993			TRUE	0.998	-10.000	0.406	0.066	Y	NA
4589350	4589351	YPE_2993	YPE_2994			TRUE	0.999	2.000	0.516	0.066	Y	NA
4589351	4589352	YPE_2994	YPE_2995			TRUE	0.997	-3.000	0.136	0.011	Y	NA
4589352	4589353	YPE_2995	YPE_2996			TRUE	0.843	127.000	0.154	1.000	Y	NA
4589353	4589354	YPE_2996	YPE_2997			TRUE	0.941	20.000	0.231	NA		NA
4589354	4589355	YPE_2997	YPE_2998			TRUE	0.932	164.000	1.000	NA		NA
4589355	4589356	YPE_2998	YPE_2999			TRUE	0.984	-3.000	0.176	NA		NA
4589356	4589357	YPE_2999	YPE_3000			TRUE	0.999	-13.000	0.647	0.008	Y	NA
4589357	4589358	YPE_3000	YPE_3001			TRUE	0.918	-7.000	0.000	NA		NA
4589358	4589359	YPE_3001	YPE_3002			TRUE	0.996	-3.000	0.538	NA		NA
4589359	4589360	YPE_3002	YPE_3003			TRUE	0.891	175.000	0.786	NA		NA
4589360	4589361	YPE_3003	YPE_3004			TRUE	0.997	-3.000	0.407	0.011		NA
4589361	4589362	YPE_3004	YPE_3005			TRUE	0.833	98.000	0.407	NA		NA
4589362	4589363	YPE_3005	YPE_3006			TRUE	0.997	-3.000	0.650	NA		NA
4589363	4589364	YPE_3006	YPE_3007			TRUE	0.946	10.000	0.150	1.000		NA
4589364	4589365	YPE_3007	YPE_3008			FALSE	0.208	174.000	0.000	1.000		NA
4589365	4589366	YPE_3008	YPE_3009			TRUE	0.904	19.000	0.146	NA		NA
4589366	4589367	YPE_3009	YPE_3010			TRUE	0.987	2.000	0.268	NA		NA
4589368	4589369	YPE_3011	YPE_3012			TRUE	0.998	13.000	0.688	0.009	Y	NA
4589371	4589372	YPE_3014	YPE_3015	acs		TRUE	0.745	57.000	0.147	NA		NA
4589372	4589373	YPE_3015	YPE_3016		actP	TRUE	0.998	-3.000	0.733	NA		NA
4589376	4589377	YPE_3019	YPE_3020			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4589378	4589379	YPE_3021	YPE_3022	aroE		TRUE	0.846	9.000	0.087	NA	N	NA
4589379	4589380	YPE_3022	YPE_3023			TRUE	0.955	2.000	0.137	NA	N	NA
4589380	4589381	YPE_3023	YPE_3024		smg	TRUE	0.920	41.000	0.331	NA		NA
4589381	4589382	YPE_3024	YPE_3025	smg	smf	TRUE	0.960	-28.000	0.124	NA		NA
4589383	4589384	YPE_3026	YPE_3027	def	fmt	TRUE	0.967	25.000	0.058	0.017	Y	NA
4589384	4589385	YPE_3027	YPE_3028	fmt	rsmB	TRUE	0.930	94.000	0.305	1.000	Y	NA
4589385	4589386	YPE_3028	YPE_3029	rsmB	trkA	FALSE	0.113	56.000	0.007	1.000	N	NA
4589386	4589387	YPE_3029	YPE_3030	trkA	mscL	FALSE	0.044	139.000	0.007	1.000	N	NA
4589388	4589389	YPE_3031	YPE_3032			TRUE	0.711	88.000	0.219	NA		NA
4589389	4589390	YPE_3032	YPE_3033		rplQ	FALSE	0.004	447.000	0.005	1.000	N	NA
4589390	4589391	YPE_3033	YPE_3034	rplQ	rpoA	TRUE	0.975	41.000	0.873	1.000	N	NA
4589391	4589392	YPE_3034	YPE_3035	rpoA	rpsD	TRUE	0.967	26.000	0.549	1.000	N	NA
4589392	4589393	YPE_3035	YPE_3036	rpsD	rpsK	TRUE	0.994	31.000	0.509	0.015	Y	NA
4589393	4589394	YPE_3036	YPE_3037	rpsK	rpsM	TRUE	0.998	17.000	0.810	0.011	Y	NA
4589394	4589395	YPE_3037	YPE_3038	rpsM	rpmJ	TRUE	0.840	148.000	0.086	0.011	Y	NA
4589395	4589396	YPE_3038	YPE_3039	rpmJ	secY	FALSE	0.384	34.000	0.036	1.000	N	NA
4589396	4589397	YPE_3039	YPE_3040	secY	rplO	TRUE	0.992	8.000	0.730	1.000	N	NA
4589397	4589398	YPE_3040	YPE_3041	rplO	rpmD	TRUE	0.999	4.000	0.653	0.002	Y	NA
4589398	4589399	YPE_3041	YPE_3042	rpmD	rpsE	TRUE	0.999	3.000	0.789	0.015	Y	NA
4589399	4589400	YPE_3042	YPE_3043	rpsE	rplR	TRUE	0.998	15.000	0.814	0.015	Y	NA
4589400	4589401	YPE_3043	YPE_3044	rplR	rplF	TRUE	0.999	10.000	0.815	0.011	Y	NA
4589401	4589402	YPE_3044	YPE_3045	rplF	rpsH	TRUE	0.998	15.000	0.808	0.011	Y	NA
4589402	4589403	YPE_3045	YPE_3046	rpsH	rpsN	TRUE	0.993	34.000	0.473	0.011	Y	NA
4589403	4589404	YPE_3046	YPE_3047	rpsN	rplE	TRUE	0.997	14.000	0.496	0.011	Y	NA
4589404	4589405	YPE_3047	YPE_3048	rplE	rplX	TRUE	0.998	15.000	0.758	0.011	Y	NA
4589405	4589406	YPE_3048	YPE_3049	rplX	rplN	TRUE	0.999	11.000	0.810	0.015	Y	NA
4589406	4589407	YPE_3049	YPE_3050	rplN	rpsQ	TRUE	0.977	181.000	0.791	0.015	Y	NA
4589407	4589408	YPE_3050	YPE_3051	rpsQ	rpmC	TRUE	1.000	0.000	0.828	0.011	Y	NA
4589408	4589409	YPE_3051	YPE_3052	rpmC	rplP	TRUE	1.000	0.000	0.802	0.011	Y	NA
4589409	4589410	YPE_3052	YPE_3053	rplP	rpsC	TRUE	0.999	13.000	0.828	0.015	Y	NA
4589410	4589411	YPE_3053	YPE_3054	rpsC	rplV	TRUE	0.998	18.000	0.719	0.015	Y	NA
4589411	4589412	YPE_3054	YPE_3055	rplV	rpsS	TRUE	0.998	15.000	0.769	0.015	Y	NA
4589412	4589413	YPE_3055	YPE_3056	rpsS	rplB	TRUE	0.998	15.000	0.820	0.015	Y	NA
4589413	4589414	YPE_3056	YPE_3057	rplB	rplW	TRUE	0.998	17.000	0.849	0.013	Y	NA
4589414	4589415	YPE_3057	YPE_3058	rplW	rplD	TRUE	0.999	-3.000	0.513	0.011	Y	NA
4589415	4589416	YPE_3058	YPE_3059	rplD	rplC	TRUE	0.996	17.000	0.486	0.011	Y	NA
4589416	4589417	YPE_3059	YPE_3060	rplC	rpsJ	TRUE	0.988	33.000	0.307	0.015	Y	NA
4589417	4589418	YPE_3060	YPE_3061	rpsJ	bfr	FALSE	0.011	414.000	0.000	1.000	N	NA
4589418	4589419	YPE_3061	YPE_3062	bfr	bfd	TRUE	0.742	79.000	0.013	NA	Y	NA
4589419	4589420	YPE_3062	YPE_3063	bfd	tnp	FALSE	0.064	188.000	0.000	NA	N	NA
4589420	4589421	YPE_3063	YPE_3064	tnp	tufA	FALSE	0.061	203.000	0.000	1.000	N	NA
4589421	4589422	YPE_3064	YPE_3065	tufA	fusA	TRUE	0.865	73.000	0.005	0.002	Y	NA
4589422	4589423	YPE_3065	YPE_3066	fusA	rpsG	TRUE	0.968	94.000	0.579	1.000	Y	NA
4589423	4589424	YPE_3066	YPE_3067	rpsG	rpsL	TRUE	0.983	97.000	0.620	0.002	Y	NA
4589424	4589425	YPE_3067	YPE_3068	rpsL		FALSE	0.169	138.000	0.058	NA	N	NA
4589425	4589426	YPE_3068	YPE_3069			TRUE	0.997	20.000	0.804	NA	Y	NA
4589426	4589427	YPE_3069	YPE_3070		yheN	TRUE	0.999	0.000	0.790	NA	Y	NA
4589427	4589428	YPE_3070	YPE_3071	yheN	yheO	TRUE	0.986	0.000	0.220	NA		NA
4589428	4589429	YPE_3071	YPE_3072	yheO	fkpA	TRUE	0.476	242.000	0.310	NA		NA
4589431	4589432	YPE_3074	YPE_3075	slyD	yheV	FALSE	0.392	95.000	0.060	1.000		NA
4589432	4589433	YPE_3075	YPE_3076	yheV	kefB	TRUE	0.975	16.000	0.400	1.000		NA
4589433	4589434	YPE_3076	YPE_3077	kefB	kefG	TRUE	0.997	4.000	0.927	1.000		NA
4589435	4589437	YPE_3079	YPE_3080	yheS		FALSE	0.239	135.000	0.000	NA		NA
4589437	4589438	YPE_3080	YPE_3081			FALSE	0.354	93.000	0.053	NA		NA
4589439	4589440	YPE_3082	YPE_3083	tauD	tauC	TRUE	0.982	-3.000	0.214	1.000	N	NA
4589440	4589441	YPE_3083	YPE_3084	tauC	tauB	TRUE	0.999	-3.000	0.728	1.000	Y	NA
4589441	4589442	YPE_3084	YPE_3085	tauB	tauA	TRUE	0.971	9.000	0.023	1.000	Y	NA
4589442	4589443	YPE_3085	YPE_3086	tauA		FALSE	0.061	203.000	0.000	1.000	N	NA
4589444	4589445	YPE_3087	YPE_3088	yheT	yheU	TRUE	0.988	-3.000	0.222	NA		NA
4589445	4589446	YPE_3088	YPE_3089	yheU	prkB	TRUE	0.714	149.000	0.303	NA		NA
4589447	4589448	YPE_3090	YPE_3091		yhfA	FALSE	0.346	72.000	0.000	NA		NA
4589449	4589450	YPE_3092	YPE_3093	crp	yhfK	TRUE	0.544	86.000	0.111	1.000		NA
4589451	4589452	YPE_3094	YPE_3095	argD	pabA	TRUE	0.772	133.000	0.088	1.000	Y	NA
4589452	4589453	YPE_3095	YPE_3096	pabA		FALSE	0.071	243.000	0.007	1.000		NA
4589453	4589454	YPE_3096	YPE_3097		ppiA	FALSE	0.049	326.000	0.000	1.000		NA
4589455	4589456	YPE_3098	YPE_3099			FALSE	0.324	249.000	0.267	1.000	N	NA
4589459	4589461	YPE_3166C	YPE_3102	codA		FALSE	0.346	72.000	0.000	NA		NA
4589461	4589462	YPE_3102	YPE_3103			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4589462	4589463	YPE_3103	YPE_3169N			FALSE	0.304	87.000	0.000	NA		NA
4589463	4589465	YPE_3169N	YPE_3104			TRUE	0.918	-7.000	0.000	NA		NA
4589466	4589467	YPE_3105	YPE_3106			FALSE	0.193	175.000	0.000	NA		NA
4589467	4589468	YPE_3106	YPE_3107			FALSE	0.051	306.000	0.000	NA		NA
4589469	4589470	YPE_3108	YPE_3109	rraA	menA	TRUE	0.828	142.000	0.158	NA	Y	NA
4589470	4589471	YPE_3109	YPE_3110	menA	hslU	FALSE	0.063	236.000	0.051	1.000	N	NA
4589471	4589472	YPE_3110	YPE_3111	hslU	hslV	TRUE	0.984	71.000	0.752	1.000	Y	NA
4589472	4589473	YPE_3111	YPE_3112	hslV	ftsN	FALSE	0.392	100.000	0.122	NA	N	NA
4589473	4589474	YPE_3112	YPE_3113	ftsN	cytR	TRUE	0.741	66.000	0.245	NA	N	NA
4589474	4589475	YPE_3113	YPE_3114	cytR	priA	FALSE	0.007	353.000	0.013	1.000	N	NA
4589476	4589477	YPE_3115	YPE_3116	rpmE		FALSE	0.014	1049.000	0.000	NA		NA
4589479	4589481	YPE_3119	YPE_3120	metB	metL	TRUE	0.900	3.000	0.000	NA		NA
4589481	4589482	YPE_3120	YPE_3121	metL	metF	TRUE	0.420	233.000	0.017	1.000	Y	NA
4589483	4589484	YPE_3122	YPE_3123			TRUE	0.939	54.000	0.167	1.000	Y	NA
4589484	4589485	YPE_3123	YPE_3124		glpR	FALSE	0.071	193.000	0.000	1.000	N	NA
4589485	4589486	YPE_3124	YPE_3125	glpR	glpG	TRUE	0.880	35.000	0.190	1.000		NA
4589486	4589487	YPE_3125	YPE_3126	glpG	glpE	TRUE	0.973	18.000	0.405	1.000		NA
4589487	4589488	YPE_3126	YPE_3127	glpE	malT	FALSE	0.014	375.000	0.000	1.000	N	NA
4589489	4589491	YPE_3129	YPE_3130	malP	malQ	TRUE	0.789	13.000	0.000	NA		NA
4589492	4589493	YPE_3131	YPE_3132	gntY	gntX	TRUE	0.564	60.000	0.066	1.000		NA
4589494	4589495	YPE_3133	YPE_3134	bioH		FALSE	0.154	170.000	0.010	NA		NA
4589496	4589497	YPE_3135	YPE_3136		feoB	TRUE	0.954	36.000	0.455	NA		NA
4589497	4589498	YPE_3136	YPE_3137	feoB	feoA	TRUE	0.886	92.000	0.177	1.000	Y	NA
4589498	4589499	YPE_3137	YPE_3138	feoA	yhgF	FALSE	0.008	524.000	0.000	1.000	N	NA
4589500	4589501	YPE_3139	YPE_3140	greB	ompR	TRUE	0.815	136.000	0.067	0.064	Y	NA
4589501	4589502	YPE_3140	YPE_3141	ompR	envZ	TRUE	0.999	-3.000	0.584	1.000	Y	NA
4589503	4589504	YPE_3142	YPE_3143	pckA	hslO	FALSE	0.094	197.000	0.048	1.000	N	NA
4589504	4589505	YPE_3143	YPE_3144	hslO	hslR	FALSE	0.372	163.000	0.140	1.000	N	NA
4589505	4589506	YPE_3144	YPE_3145	hslR	yrfG	TRUE	0.729	29.000	0.056	1.000		NA
4589506	4589507	YPE_3145	YPE_3146	yrfG	yrfF	TRUE	0.469	144.000	0.122	1.000		NA
4589508	4589509	YPE_3147	YPE_3148		nudE	FALSE	0.259	113.000	0.000	NA		NA
4589511	4589512	YPE_3150	YPE_3151			TRUE	0.998	0.000	0.870	NA		NA
4589512	4589513	YPE_3151	YPE_3152			TRUE	0.980	-7.000	0.174	NA		NA
4589513	4589514	YPE_3152	YPE_3153			TRUE	0.889	26.000	0.167	NA		NA
4589514	4589515	YPE_3153	YPE_3154		hofQ	FALSE	0.046	427.000	0.072	NA		NA
4589515	4589516	YPE_3154	YPE_3155	hofQ	aroK	FALSE	0.283	349.000	0.319	1.000		NA
4589516	4589517	YPE_3155	YPE_3156	aroK	aroB	TRUE	0.946	57.000	0.208	1.000	Y	NA
4589517	4589518	YPE_3156	YPE_3157	aroB	damX	FALSE	0.065	254.000	0.022	NA		NA
4589518	4589519	YPE_3157	YPE_3158	damX	dam	TRUE	0.740	84.000	0.234	NA		NA
4589519	4589520	YPE_3158	YPE_3159	dam	rpe	FALSE	0.034	303.000	0.053	1.000	N	NA
4589520	4589521	YPE_3159	YPE_3160	rpe	gph	TRUE	0.938	-7.000	0.050	1.000		NA
4589521	4589522	YPE_3160	YPE_3161	gph	trpS	TRUE	0.967	2.000	0.118	1.000		NA
4589523	4589524	YPE_3162	YPE_3163	cysG	nirC	FALSE	0.266	88.000	0.065	1.000	N	NA
4589524	4589525	YPE_3163	YPE_3164	nirC	nirD	TRUE	0.832	203.000	0.283	1.000	Y	NA
4589525	4589526	YPE_3164	YPE_3165	nirD	nirB	TRUE	0.999	-3.000	0.829	0.000	N	NA
4589527	4589529	YPE_3166N	YPE_3167	codA		FALSE	0.304	87.000	0.000	NA		NA
4589529	4589530	YPE_3167	YPE_3168			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4589530	4589531	YPE_3168	YPE_3169C			FALSE	0.339	73.000	0.000	NA		NA
4589531	4589533	YPE_3169C	YPE_3170		tnp	FALSE	0.033	378.000	0.000	NA		NA
4589535	4589536	YPE_3172	YPE_3173		glpF	TRUE	0.823	10.000	0.000	NA		NA
4589536	4589537	YPE_3173	YPE_3175	glpF	glpK	FALSE	0.191	177.000	0.000	NA		NA
4589537	4589539	YPE_3175	YPE_3176	glpK	glpX	TRUE	0.916	1.000	0.000	NA		NA
4589539	4589541	YPE_3176	YPE_3178	glpX	fpr	FALSE	0.219	155.000	0.000	NA		NA
4589543	4589544	YPE_3180	YPE_3181	yiiQ	tpiA	FALSE	0.319	129.000	0.058	NA		NA
4589546	4589547	YPE_3183	YPE_3184			TRUE	0.993	-3.000	0.353	NA		NA
4589547	4589548	YPE_3184	YPE_3185			FALSE	0.197	66.000	0.000	1.000	N	NA
4589548	4589549	YPE_3185	YPE_3186			TRUE	0.850	76.000	0.000	0.053	Y	NA
4589550	4589551	YPE_3187	YPE_3188	sbp	pfkA	FALSE	0.072	221.000	0.049	1.000	N	NA
4589551	4589552	YPE_3188	YPE_3189	pfkA	fieF	FALSE	0.060	218.000	0.040	1.000	N	NA
4589552	4589553	YPE_3189	YPE_3190	fieF		FALSE	0.019	562.000	0.000	NA		NA
4589553	4589554	YPE_3190	YPE_3191		cpxP	FALSE	0.016	678.000	0.000	NA		NA
4589555	4589556	YPE_3192	YPE_3193	cpxR	cpxA	TRUE	0.999	-3.000	0.791	1.000	Y	NA
4589559	4589560	YPE_3196	YPE_3197	cysE		FALSE	0.385	66.000	0.000	NA		NA
4589560	4589561	YPE_3197	YPE_3198		gpsA	TRUE	0.432	60.000	0.000	NA		NA
4589561	4589562	YPE_3198	YPE_3199	gpsA	secB	TRUE	0.978	0.000	0.206	1.000	N	NA
4589562	4589563	YPE_3199	YPE_3200	secB	grxC	FALSE	0.160	88.000	0.038	1.000	N	NA
4589563	4589564	YPE_3200	YPE_3201	grxC	yibN	FALSE	0.163	119.000	0.048	1.000	N	NA
4589565	4589566	YPE_3202	YPE_3203	gpmI	envC	TRUE	0.842	28.000	0.170	1.000	N	NA
4589566	4589567	YPE_3203	YPE_3205	envC	yibQ	TRUE	0.688	24.000	0.000	NA		NA
4589569	4589570	YPE_3206	YPE_3207	tdh	kbl	TRUE	0.985	10.000	0.547	1.000	N	NA
4589571	4589572	YPE_3208	YPE_3209	rfaD	rfaF	TRUE	0.962	31.000	0.146	1.000	Y	NA
4589572	4589573	YPE_3209	YPE_3210	rfaF	rfaC	TRUE	0.998	0.000	0.205	0.001	Y	NA
4589573	4589574	YPE_3210	YPE_3211	rfaC	kdtA	FALSE	0.164	420.000	0.028	1.000	Y	NA
4589574	4589575	YPE_3211	YPE_3212	kdtA	kdtX	TRUE	0.991	1.000	0.083	NA	Y	NA
4589575	4589576	YPE_3212	YPE_3213	kdtX	coaD	TRUE	0.747	-3.000	0.023	NA	N	NA
4589577	4589578	YPE_3214	YPE_3215	mutM	rpmG	FALSE	0.151	83.000	0.034	1.000	N	NA
4589578	4589579	YPE_3215	YPE_3216	rpmG	rpmB	TRUE	0.996	12.000	0.332	0.011	Y	NA
4589579	4589580	YPE_3216	YPE_3217	rpmB	radC	FALSE	0.009	263.000	0.002	1.000	N	NA
4589581	4589582	YPE_3218	YPE_3219	dfp	dut	TRUE	0.969	-19.000	0.201	1.000	N	NA
4589582	4589583	YPE_3219	YPE_3220	dut	ttk	FALSE	0.207	122.000	0.060	1.000	N	NA
4589584	4589585	YPE_3221	YPE_3222	pyrE	rph	FALSE	0.288	167.000	0.108	1.000	N	NA
4589586	4589587	YPE_3223	YPE_3224	yicC	yicG	FALSE	0.030	403.000	0.000	NA		NA
4589589	4589590	YPE_3226	YPE_3227	gmk	rpoZ	TRUE	0.910	55.000	0.471	1.000	N	NA
4589590	4589591	YPE_3227	YPE_3228	rpoZ	spoT	TRUE	0.988	20.000	0.291	1.000	Y	NA
4589591	4589592	YPE_3228	YPE_3229	spoT	spoU	TRUE	0.888	6.000	0.095	1.000	N	NA
4589592	4589593	YPE_3229	YPE_3230	spoU	recG	TRUE	0.919	1.000	0.076	1.000	N	NA
4589595	4589596	YPE_3232	YPE_3233	yicE	yicH	TRUE	0.672	148.000	0.257	NA		NA
4589598	4589599	YPE_3235	YPE_3236			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4589600	4589601	YPE_3237	YPE_3238	dtd	rbn	TRUE	0.905	7.000	0.069	1.000		NA
4589601	4589602	YPE_3238	YPE_3239	rbn	yihX	FALSE	0.292	97.000	0.031	1.000		NA
4589602	4589603	YPE_3239	YPE_3240	yihX	bipA	FALSE	0.036	322.000	0.007	1.000		NA
4589604	4589605	YPE_3241	YPE_3242		glnA	FALSE	0.123	186.000	0.003	NA		NA
4589605	4589606	YPE_3242	YPE_3243	glnA	glnl	FALSE	0.052	253.000	0.053	1.000	N	NA
4589606	4589607	YPE_3243	YPE_3244	glnl	glnG	TRUE	0.998	8.000	0.587	0.064	Y	NA
4589608	4589609	YPE_3245	YPE_3246	hemN	yihI	FALSE	0.354	183.000	0.107	NA		NA
4589609	4589610	YPE_3246	YPE_3247	yihI	csrC	FALSE	0.227	145.000	0.000	NA		NA
4589612	4589613	YPE_3249	YPE_3250	tnp	spf	FALSE	0.228	144.000	0.000	NA		NA
4589613	4589614	YPE_3250	YPE_3251	spf	polA	FALSE	0.216	159.000	0.000	NA		NA
4589614	4589615	YPE_3251	YPE_3252	polA	dsbA	FALSE	0.024	492.000	0.000	1.000		NA
4589615	4589616	YPE_3252	YPE_3253	dsbA	yihE	TRUE	0.824	28.000	0.111	NA		NA
4589616	4589617	YPE_3253	YPE_3254	yihE	yihD	TRUE	0.534	80.000	0.106	NA		NA
4589618	4589619	YPE_3255	YPE_3256	mobA	mobB	TRUE	0.995	0.000	0.064	0.002	Y	NA
4589620	4589621	YPE_3257	YPE_3258			FALSE	0.021	501.000	0.000	NA		NA
4589621	4589622	YPE_3258	YPE_3259			FALSE	0.265	108.000	0.000	NA		NA
4589622	4589623	YPE_3259	YPE_3260			FALSE	0.079	253.000	0.000	NA		NA
4589623	4589624	YPE_3260	YPE_3261			FALSE	0.235	137.000	0.000	NA		NA
4589625	4589626	YPE_3262	YPE_3263	yieP	hsrA	TRUE	0.613	80.000	0.133	1.000		NA
4589627	4589628	YPE_3264	YPE_3265	rbsK	rbsD	TRUE	0.855	51.000	0.010	1.000	Y	NA
4589628	4589629	YPE_3265	YPE_3266	rbsD	kup	FALSE	0.027	205.000	0.010	1.000	N	NA
4589630	4589631	YPE_3267	YPE_3268	ravA	viaA	TRUE	0.991	4.000	0.443	NA		NA
4589633	4589634	YPE_3270	YPE_3271	asnC	mioC	TRUE	0.529	93.000	0.165	1.000	N	NA
4589634	4589635	YPE_3271	YPE_3272	mioC	gidA	FALSE	0.013	381.000	0.000	1.000	N	NA
4589635	4589636	YPE_3272	YPE_3273	gidA	gidB	TRUE	0.770	146.000	0.466	1.000	N	NA
4589636	4589637	YPE_3273	YPE_3274	gidB	atpI	FALSE	0.002	667.000	0.005	1.000	N	NA
4589637	4589638	YPE_3274	YPE_3275	atpI	atpB	TRUE	0.985	40.000	0.291	0.004	Y	NA
4589638	4589639	YPE_3275	YPE_3276	atpB	atpE	TRUE	0.991	50.000	0.557	0.004	Y	NA
4589639	4589640	YPE_3276	YPE_3277	atpE	atpF	TRUE	0.991	62.000	0.666	0.003	Y	NA
4589640	4589641	YPE_3277	YPE_3278	atpF	atpH	TRUE	0.993	15.000	0.242	0.003	Y	NA
4589641	4589642	YPE_3278	YPE_3279	atpH	atpA	TRUE	0.999	15.000	0.864	0.003	Y	NA
4589642	4589643	YPE_3279	YPE_3280	atpA	atpG	TRUE	0.994	62.000	0.846	0.003	Y	NA
4589643	4589644	YPE_3280	YPE_3281	atpG	atpD	TRUE	0.981	156.000	0.724	0.003	Y	NA
4589644	4589645	YPE_3281	YPE_3282	atpD	atpC	TRUE	0.998	22.000	0.837	0.003	Y	NA
4589645	4589646	YPE_3282	YPE_3283	atpC	glmU	FALSE	0.015	621.000	0.067	1.000	N	NA
4589646	4589647	YPE_3283	YPE_3284	glmU	glmS	TRUE	0.596	201.000	0.055	1.000	Y	NA
4589647	4589648	YPE_3284	YPE_3285	glmS	pstS	FALSE	0.009	483.000	0.000	1.000	N	NA
4589648	4589649	YPE_3285	YPE_3286	pstS	pstC	TRUE	0.774	229.000	0.145	0.002	Y	NA
4589649	4589650	YPE_3286	YPE_3287	pstC	pstA	TRUE	0.999	2.000	0.537	0.002	Y	NA
4589650	4589651	YPE_3287	YPE_3288	pstA	pstB	TRUE	0.982	81.000	0.526	0.002	Y	NA
4589651	4589652	YPE_3288	YPE_3289	pstB	phoU	TRUE	0.934	88.000	0.317	NA	Y	NA
4589652	4589653	YPE_3289	YPE_3290	phoU		FALSE	0.019	296.000	0.000	NA	N	NA
4589653	4589654	YPE_3290	YPE_3291			FALSE	0.043	220.000	0.000	NA	N	NA
4589654	4589655	YPE_3291	YPE_3292			TRUE	0.903	183.000	0.263	0.053	Y	NA
4589655	4589656	YPE_3292	YPE_3293			TRUE	0.998	2.000	0.282	0.015	Y	NA
4589658	4589659	YPE_3295	YPE_3296	yieG		FALSE	0.019	545.000	0.000	NA		NA
4589659	4589660	YPE_3296	YPE_3297			FALSE	0.369	68.000	0.000	NA		NA
4589661	4589662	YPE_3298	YPE_3299		thdF	FALSE	0.134	186.000	0.003	1.000		NA
4589662	4589663	YPE_3299	YPE_3300	thdF		TRUE	0.739	143.000	0.221	0.064		NA
4589663	4589664	YPE_3300	YPE_3301		rnpA	FALSE	0.158	224.000	0.105	1.000	N	NA
4589664	4589665	YPE_3301	YPE_3302	rnpA	rpmH	TRUE	0.995	19.000	0.787	0.000		NA
4589665	4589666	YPE_3302	YPE_3303	rpmH		FALSE	0.033	377.000	0.000	NA		NA
4589667	4589668	YPE_3304	YPE_3305	dnaA	dnaN	TRUE	0.996	5.000	0.328	1.000	Y	NA
4589668	4589669	YPE_3305	YPE_3306	dnaN	recF	TRUE	0.894	173.000	0.318	1.000	Y	NA
4589669	4589670	YPE_3306	YPE_3307	recF	gyrB	TRUE	0.992	20.000	0.249	0.003	Y	NA
4589670	4589671	YPE_3307	YPE_3308	gyrB		FALSE	0.191	216.000	0.003	0.090		NA
4589672	4589673	YPE_3309	YPE_3310			TRUE	0.939	54.000	0.167	1.000	Y	NA
4589673	4589674	YPE_3310	YPE_3311			FALSE	0.057	207.000	0.000	1.000	N	NA
4589674	4589675	YPE_3311	YPE_3312		tdcB	TRUE	0.998	-6.000	0.316	1.000	Y	NA
4589679	4589680	YPE_3316	YPE_3317	ibpA	ibpB	TRUE	0.425	281.000	0.099	NA	Y	NA
4589680	4589681	YPE_3317	YPE_3318	ibpB		FALSE	0.056	373.000	0.069	NA		NA
4589682	4589683	YPE_3319	YPE_3320	avtA		FALSE	0.025	455.000	0.000	NA		NA
4589683	4589684	YPE_3320	YPE_3321		malS	FALSE	0.028	415.000	0.000	NA		NA
4589684	4589685	YPE_3321	YPE_3322	malS		FALSE	0.024	289.000	0.000	1.000	N	NA
4589687	4589688	YPE_3324	YPE_3325			FALSE	0.040	358.000	0.000	1.000		NA
4589688	4589689	YPE_3325	YPE_3326		tag	TRUE	0.933	-3.000	0.028	1.000		NA
4589690	4589691	YPE_3327	YPE_3328	glyQ	glyS	TRUE	0.999	10.000	0.651	0.000	Y	NA
4589691	4589692	YPE_3328	YPE_3329	glyS		FALSE	0.016	467.000	0.003	NA		NA
4589692	4589693	YPE_3329	YPE_3330		mtlA	FALSE	0.017	650.000	0.000	NA		NA
4589693	4589694	YPE_3330	YPE_3331	mtlA	mtlD	TRUE	0.906	137.000	0.292	1.000	Y	NA
4589694	4589695	YPE_3331	YPE_3332	mtlD	mtlR	FALSE	0.396	207.000	0.230	NA	N	NA
4589696	4589697	YPE_3333	YPE_3334			FALSE	0.019	556.000	0.000	NA		NA
4589697	4589698	YPE_3334	YPE_3335		tsr	FALSE	0.168	190.000	0.000	NA		NA
4589698	4589699	YPE_3335	YPE_3336	tsr	sodA	FALSE	0.016	344.000	0.000	1.000	N	NA
4589699	4589700	YPE_3336	YPE_3337	sodA	fdhD	FALSE	0.009	436.000	0.029	1.000	N	NA
4589701	4589703	YPE_3338	YPE_3339	fdoG	fdoH	TRUE	0.789	13.000	0.000	NA		NA
4589703	4589704	YPE_3339	YPE_3340	fdoH	fdoI	TRUE	1.000	-3.000	0.944	0.000	Y	NA
4589704	4589705	YPE_3340	YPE_3341	fdoI	fdhE	TRUE	0.973	0.000	0.182	NA	N	NA
4589705	4589706	YPE_3341	YPE_3342	fdhE	selA	FALSE	0.184	184.000	0.083	NA	N	NA
4589706	4589707	YPE_3342	YPE_3344	selA	selB	TRUE	0.934	-3.000	0.000	NA		NA
4589712	4589713	YPE_3347	YPE_3348		cmr	FALSE	0.016	710.000	0.000	NA		NA
4589713	4589714	YPE_3348	YPE_3349	cmr		FALSE	0.009	473.000	0.000	1.000	N	NA
4589714	4589715	YPE_3349	YPE_3350			TRUE	0.939	54.000	0.167	1.000	Y	NA
4589716	4589717	YPE_3351	YPE_3352			FALSE	0.015	882.000	0.000	1.000		NA
4589717	4589718	YPE_3352	YPE_3354			FALSE	0.330	76.000	0.000	NA		NA
4589718	4589720	YPE_3354	YPE_3355			FALSE	0.294	93.000	0.000	NA		NA
4589720	4589721	YPE_3355	YPE_3356			TRUE	0.957	39.000	0.500	1.000		NA
4589722	4589723	YPE_3357	YPE_3358	xylB	xylA	TRUE	0.687	124.000	0.020	1.000	Y	NA
4589724	4589725	YPE_3359	YPE_3360			TRUE	0.940	208.000	0.518	0.012	Y	NA
4589725	4589726	YPE_3360	YPE_3361			TRUE	0.999	-13.000	0.469	0.012	Y	NA
4589726	4589727	YPE_3361	YPE_3362		xlyR	TRUE	0.499	90.000	0.146	1.000	N	NA
4589727	4589728	YPE_3362	YPE_3363	xlyR		FALSE	0.244	130.000	0.000	NA		NA
4589728	4589729	YPE_3363	YPE_3364			FALSE	0.213	162.000	0.000	NA		NA
4589729	4589730	YPE_3364	YPE_3365			TRUE	0.823	59.000	0.222	NA		NA
4589731	4589732	YPE_3366	YPE_3367			FALSE	0.195	174.000	0.000	NA		NA
4589732	4589734	YPE_3367	YPE_3368			TRUE	0.560	39.000	0.000	NA		NA
4589734	4589735	YPE_3368	YPE_3369			FALSE	0.014	1898.000	0.000	1.000		NA
4589735	4589736	YPE_3369	YPE_3370			TRUE	1.000	-3.000	0.870	1.000	Y	NA
4589736	4589737	YPE_3370	YPE_3371			TRUE	1.000	-10.000	0.870	0.053	Y	NA
4589737	4589738	YPE_3371	YPE_3372			TRUE	0.995	10.000	0.356	1.000	Y	NA
4589738	4589739	YPE_3372	YPE_3373			FALSE	0.008	523.000	0.000	1.000	N	NA
4589739	4589740	YPE_3373	YPE_3374			TRUE	0.973	2.000	0.138	1.000		NA
4589740	4589741	YPE_3374	YPE_3375			TRUE	0.763	83.000	0.250	1.000		NA
4589741	4589742	YPE_3375	YPE_3376			TRUE	0.997	-3.000	0.800	1.000	N	NA
4589743	4589744	YPE_3377	YPE_3378	hutU	hutH	TRUE	0.999	-3.000	0.315	0.000	Y	NA
4589744	4589745	YPE_3378	YPE_3379	hutH		FALSE	0.150	418.000	0.006	1.000	Y	NA
4589745	4589746	YPE_3379	YPE_3380			FALSE	0.008	468.000	0.000	NA	N	NA
4589746	4589747	YPE_3380	YPE_3381			FALSE	0.020	529.000	0.000	NA		NA
4589747	4589748	YPE_3381	YPE_3382		uhpA	TRUE	0.466	116.000	0.103	1.000		NA
4589748	4589749	YPE_3382	YPE_3384	uhpA	uhpB	TRUE	0.934	-3.000	0.000	NA		NA
4589749	4589751	YPE_3384	YPE_3385	uhpB		FALSE	0.304	87.000	0.000	NA		NA
4589751	4589752	YPE_3385	YPE_3386			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4589752	4589753	YPE_3386	YPE_3387		uhpC	FALSE	0.006	900.000	0.000	1.000	N	NA
4589753	4589754	YPE_3387	YPE_3388	uhpC		FALSE	0.257	117.000	0.000	NA		NA
4589754	4589755	YPE_3388	YPE_3389			FALSE	0.048	313.000	0.000	NA		NA
4589755	4589756	YPE_3389	YPE_3390			TRUE	0.741	109.000	0.286	NA		NA
4589756	4589757	YPE_3390	YPE_3391			TRUE	0.734	18.000	0.000	NA		NA
4589757	4589758	YPE_3391	YPE_3392		dppA	FALSE	0.030	403.000	0.000	NA		NA
4589758	4589759	YPE_3392	YPE_3393	dppA	dppB	TRUE	0.520	283.000	0.087	0.053	Y	NA
4589759	4589760	YPE_3393	YPE_3394	dppB	dppC	TRUE	0.988	82.000	0.779	0.053	Y	NA
4589760	4589761	YPE_3394	YPE_3395	dppC	dppD	TRUE	0.996	14.000	0.560	1.000	Y	NA
4589761	4589762	YPE_3395	YPE_3396	dppD	dppF	TRUE	0.986	66.000	0.500	0.001	Y	NA
4589762	4589763	YPE_3396	YPE_3398	dppF	bcsZ	FALSE	0.270	104.000	0.000	NA		NA
4589763	4589765	YPE_3398	YPE_3399	bcsZ	hmsP	FALSE	0.048	314.000	0.000	NA		NA
4589765	4589766	YPE_3399	YPE_3400	hmsP		FALSE	0.036	640.000	0.000	0.084		NA
4589766	4589767	YPE_3400	YPE_3401		pelY	FALSE	0.403	246.000	0.250	1.000		NA
4589767	4589768	YPE_3401	YPE_3402	pelY		TRUE	0.703	125.000	0.250	1.000		NA
4589768	4589769	YPE_3402	YPE_3403		dctA	FALSE	0.027	455.000	0.000	1.000		NA
4589769	4589770	YPE_3403	YPE_3404	dctA		FALSE	0.075	365.000	0.088	1.000		NA
4589771	4589772	YPE_3405	YPE_3406	kdgK		FALSE	0.068	279.000	0.034	1.000		NA
4589773	4589774	YPE_3407	YPE_3408			FALSE	0.018	305.000	0.000	NA	N	NA
4589775	4589776	YPE_3409	YPE_3410	cdh		TRUE	0.686	25.000	0.033	1.000		NA
4589777	4589778	YPE_3411	YPE_3412	yapE		FALSE	0.301	88.000	0.000	NA		NA
4589778	4589779	YPE_3412	YPE_3413			TRUE	0.912	2.000	0.000	NA		NA
4589779	4589780	YPE_3413	YPE_3414			FALSE	0.369	68.000	0.000	NA		NA
4589781	4589782	YPE_3415	YPE_3416	glxK		TRUE	0.993	11.000	0.295	1.000	Y	NA
4589782	4589783	YPE_3416	YPE_3417			TRUE	0.579	178.000	0.290	1.000	N	NA
4589783	4589784	YPE_3417	YPE_3418		gor	FALSE	0.072	192.000	0.000	1.000	N	NA
4589784	4589785	YPE_3418	YPE_3419	gor		FALSE	0.341	186.000	0.100	1.000		NA
4589786	4589787	YPE_3420	YPE_3421	prlC		TRUE	0.945	4.000	0.098	NA		NA
4589788	4589789	YPE_3422	YPE_3423		gdhA	FALSE	0.037	245.000	0.000	1.000	N	NA
4589789	4589790	YPE_3423	YPE_3424	gdhA	uspA	FALSE	0.035	247.000	0.000	1.000	N	NA
4589792	4589793	YPE_3426	YPE_3427	tnp		FALSE	0.028	266.000	0.000	1.000	N	NA
4589796	4589797	YPE_3430	YPE_3431			TRUE	0.968	-7.000	0.000	0.012		NA
4589797	4589798	YPE_3431	YPE_3432			TRUE	0.951	31.000	0.238	0.012		NA
4589798	4589799	YPE_3432	YPE_3433			TRUE	0.523	75.000	0.095	NA		NA
4589799	4589800	YPE_3433	YPE_3434			TRUE	0.876	26.000	0.149	NA		NA
4589800	4589801	YPE_3434	YPE_3435			TRUE	0.988	10.000	0.180	NA	Y	NA
4589802	4589803	YPE_3436	YPE_3437			TRUE	0.924	0.000	0.000	NA		NA
4589804	4589805	YPE_3438	YPE_3439	ryhB		FALSE	0.117	221.000	0.000	NA		NA
4589805	4589806	YPE_3439	YPE_3440		gntR	TRUE	0.407	129.000	0.091	NA		NA
4589808	4589809	YPE_3442	YPE_3443	gntK		FALSE	0.183	182.000	0.000	NA		NA
4589809	4589810	YPE_3443	YPE_3444			FALSE	0.035	371.000	0.000	NA		NA
4589812	4589813	YPE_3446	YPE_3447	asd		FALSE	0.205	169.000	0.000	NA		NA
4589813	4589814	YPE_3447	YPE_3448			FALSE	0.094	241.000	0.000	NA		NA
4589814	4589815	YPE_3448	YPE_3449			TRUE	0.844	7.000	0.000	NA		NA
4589819	4589820	YPE_3453	YPE_3454	glgB	glgX	TRUE	0.995	2.000	0.069	0.001	Y	NA
4589820	4589821	YPE_3454	YPE_3455	glgX	glgC	TRUE	0.991	10.000	0.228	1.000	Y	NA
4589821	4589822	YPE_3455	YPE_3456	glgC	glgA	TRUE	0.950	68.000	0.307	1.000	Y	NA
4589822	4589823	YPE_3456	YPE_3457	glgA	glgP	TRUE	0.839	185.000	0.228	1.000	Y	NA
4589826	4589827	YPE_3460	YPE_3461			FALSE	0.050	309.000	0.000	NA		NA
4589827	4589828	YPE_3461	YPE_3462			TRUE	0.900	3.000	0.000	NA		NA
4589829	4589830	YPE_3463	YPE_3464		ppc	FALSE	0.005	3270.000	0.000	1.000	N	NA
4589830	4589831	YPE_3464	YPE_3465	ppc	argE	FALSE	0.023	374.000	0.053	1.000	N	NA
4589832	4589833	YPE_3466	YPE_3467	argC	argB	TRUE	0.850	169.000	0.097	0.002	Y	NA
4589833	4589834	YPE_3467	YPE_3468	argB	argH	TRUE	0.626	167.000	0.017	1.000	Y	NA
4589834	4589835	YPE_3468	YPE_3469	argH		FALSE	0.007	599.000	0.000	1.000	N	NA
4589835	4589836	YPE_3469	YPE_3470			FALSE	0.115	222.000	0.000	NA		NA
4589836	4589837	YPE_3470	YPE_3471			FALSE	0.208	166.000	0.000	NA		NA
4589837	4589838	YPE_3471	YPE_3472			TRUE	0.978	76.000	1.000	0.008		NA
4589838	4589839	YPE_3472	YPE_3473			TRUE	0.957	65.000	0.667	0.008	N	NA
4589840	4589841	YPE_3474	YPE_3475			TRUE	0.751	95.000	0.204	0.004	N	NA
4589844	4589845	YPE_3478	YPE_3479			TRUE	0.985	13.000	0.508	NA		NA
4589847	4589848	YPE_3481	YPE_3482		murI	TRUE	0.704	-55.000	0.025	1.000	N	NA
4589849	4589850	YPE_3483	YPE_3484			FALSE	0.235	137.000	0.000	NA		NA
4589850	4589851	YPE_3484	YPE_3485			FALSE	0.079	253.000	0.000	NA		NA
4589851	4589852	YPE_3485	YPE_3486			FALSE	0.265	108.000	0.000	NA		NA
4589852	4589853	YPE_3486	YPE_3487			FALSE	0.251	124.000	0.000	NA		NA
4589853	4589854	YPE_3487	YPE_3488			TRUE	0.831	9.000	0.000	NA		NA
4589854	4589855	YPE_3488	YPE_3489			FALSE	0.014	978.000	0.000	NA		NA
4589855	4589856	YPE_3489	YPE_3490			TRUE	0.989	86.000	0.804	0.011	Y	NA
4589856	4589857	YPE_3490	YPE_3491			TRUE	0.998	12.000	0.506	0.011	Y	NA
4589857	4589858	YPE_3491	YPE_3492			TRUE	1.000	0.000	0.865	0.011	Y	NA
4589862	4589863	YPE_3496	YPE_3497	ilvG	ilvM	TRUE	0.999	-3.000	0.943	0.002		NA
4589863	4589864	YPE_3497	YPE_3498	ilvM	ilvE	TRUE	0.925	23.000	0.205	1.000		NA
4589864	4589865	YPE_3498	YPE_3499	ilvE	ilvD	FALSE	0.339	311.000	0.075	1.000	Y	NA
4589865	4589866	YPE_3499	YPE_3500	ilvD	ilvA	TRUE	0.986	6.000	0.106	1.000	Y	NA
4589867	4589868	YPE_3501	YPE_3502			TRUE	0.439	59.000	0.000	NA		NA
4589868	4589869	YPE_3502	YPE_3503			TRUE	0.439	59.000	0.000	NA		NA
4589869	4589870	YPE_3503	YPE_3504			TRUE	0.996	-16.000	0.667	NA		NA
4589870	4589871	YPE_3504	YPE_3505			TRUE	0.933	72.000	0.667	NA		NA
4589874	4589875	YPE_3508	YPE_3510	ilvC		FALSE	0.013	2019.000	0.000	NA		NA
4589875	4589876	YPE_3510	YPE_3512		imm	FALSE	0.021	506.000	0.000	NA		NA
4589877	4589878	YPE_3513	YPE_3514			TRUE	0.688	24.000	0.000	NA		NA
4589878	4589879	YPE_3514	YPE_3515			TRUE	0.986	38.000	1.000	1.000		NA
4589879	4589880	YPE_3515	YPE_3516			TRUE	0.980	17.000	0.500	1.000		NA
4589880	4589881	YPE_3516	YPE_3517			TRUE	0.991	28.000	0.500	1.000	Y	NA
4589881	4589882	YPE_3517	YPE_3518			TRUE	0.992	64.000	1.000	1.000	Y	NA
4589884	4589885	YPE_3520	YPE_3521			FALSE	0.135	97.000	0.000	1.000	N	NA
4589885	4589886	YPE_3521	YPE_3522		ppiC	FALSE	0.103	239.000	0.000	1.000		NA
4589889	4589890	YPE_3525	YPE_3526	trxA	rho	FALSE	0.026	480.000	0.087	1.000	N	NA
4589890	4589891	YPE_3526	YPE_3527	rho	rfe	FALSE	0.008	535.000	0.000	1.000	N	NA
4589891	4589892	YPE_3527	YPE_3528	rfe	wzzE	TRUE	0.998	21.000	0.735	0.003	Y	NA
4589892	4589893	YPE_3528	YPE_3529	wzzE	rffE	TRUE	0.917	281.000	0.677	0.003	Y	NA
4589893	4589894	YPE_3529	YPE_3530	rffE	rffD	TRUE	0.998	-3.000	0.348	1.000	Y	NA
4589894	4589895	YPE_3530	YPE_3531	rffD	rffG	TRUE	0.998	-3.000	0.273	1.000	Y	NA
4589895	4589896	YPE_3531	YPE_3532	rffG	rffH	TRUE	0.908	312.000	0.739	0.003	Y	NA
4589896	4589897	YPE_3532	YPE_3533	rffH	rffC	TRUE	0.969	-22.000	0.145	1.000		NA
4589897	4589898	YPE_3533	YPE_3534	rffC	rffA	TRUE	0.986	2.000	0.248	1.000		NA
4589898	4589899	YPE_3534	YPE_3535	rffA	wzxE	TRUE	0.984	2.000	0.218	1.000		NA
4589899	4589900	YPE_3535	YPE_3536	wzxE	rffT	TRUE	0.981	23.000	0.605	1.000		NA
4589900	4589901	YPE_3536	YPE_3537	rffT	wzyE	TRUE	0.998	-3.000	0.684	1.000		NA
4589901	4589902	YPE_3537	YPE_3538	wzyE	rffM	TRUE	0.940	9.000	0.126	1.000		NA
4589902	4589903	YPE_3538	YPE_3539	rffM		FALSE	0.008	524.000	0.000	1.000	N	NA
4589903	4589904	YPE_3539	YPE_3540			FALSE	0.225	149.000	0.000	NA		NA
4589904	4589905	YPE_3540	YPE_3541			FALSE	0.312	83.000	0.000	NA		NA
4589905	4589906	YPE_3541	YPE_3542			TRUE	0.742	17.000	0.000	NA		NA
4589906	4589907	YPE_3542	YPE_3543			FALSE	0.330	76.000	0.000	NA		NA
4589907	4589908	YPE_3543	YPE_3544		tnp	FALSE	0.014	867.000	0.000	NA		NA
4589909	4589910	YPE_3545	YPE_3546	hemY	hemX	TRUE	0.993	3.000	0.144	1.000	Y	NA
4589910	4589911	YPE_3546	YPE_3547	hemX	hemD	TRUE	0.992	31.000	0.600	1.000	Y	NA
4589911	4589912	YPE_3547	YPE_3548	hemD	hemC	TRUE	0.998	-3.000	0.205	0.001	Y	NA
4589915	4589916	YPE_3551	YPE_3552		dapF	FALSE	0.040	184.000	0.021	NA	N	NA
4589916	4589917	YPE_3552	YPE_3553	dapF		TRUE	0.739	65.000	0.175	NA		NA
4589917	4589918	YPE_3553	YPE_3554		xerC	TRUE	0.998	-3.000	0.714	NA		NA
4589918	4589919	YPE_3554	YPE_3555	xerC		TRUE	0.993	0.000	0.367	1.000		NA
4589919	4589920	YPE_3555	YPE_3556		uvrD	TRUE	0.549	102.000	0.128	1.000		NA
4589922	4589923	YPE_3558	YPE_3559			TRUE	0.796	14.000	0.042	NA		NA
4589923	4589924	YPE_3559	YPE_3560		corA	FALSE	0.018	649.000	0.000	1.000		NA
4589925	4589926	YPE_3561	YPE_3562			TRUE	0.501	87.000	0.099	NA		NA
4589927	4589928	YPE_3563	YPE_3564	pldA	recQ	FALSE	0.256	78.000	0.057	1.000	N	NA
4589928	4589929	YPE_3564	YPE_3565	recQ	rhtC	FALSE	0.155	107.000	0.043	1.000	N	NA
4589931	4589932	YPE_3567	YPE_3568	pldB		TRUE	0.965	35.000	0.524	1.000		NA
4589932	4589933	YPE_3568	YPE_3569		glpA	FALSE	0.013	5250.000	0.000	1.000		NA
4589933	4589934	YPE_3569	YPE_3570	glpA	glpB	TRUE	0.997	-10.000	0.650	0.001	N	NA
4589934	4589935	YPE_3570	YPE_3571	glpB	glpC	TRUE	0.969	45.000	0.547	0.001	N	NA
4589936	4589937	YPE_3572	YPE_3573			FALSE	0.340	130.000	0.066	NA		NA
4589939	4589940	YPE_3575	YPE_3576	zntA		FALSE	0.307	414.000	0.325	0.063		NA
4589941	4589942	YPE_3577	YPE_3578			FALSE	0.175	212.000	0.058	NA		NA
4589943	4589944	YPE_3579	YPE_3580			TRUE	0.938	-10.000	0.063	NA		NA
4589944	4589945	YPE_3580	YPE_3581			FALSE	0.262	110.000	0.000	NA		NA
4589946	4589947	YPE_3582	YPE_3583	ftsY	ftsE	TRUE	0.947	6.000	0.117	0.088	N	NA
4589947	4589948	YPE_3583	YPE_3584	ftsE	ftsX	TRUE	0.992	-10.000	0.121	1.000	Y	NA
4589948	4589949	YPE_3584	YPE_3585	ftsX	rpoH	FALSE	0.031	311.000	0.051	1.000	N	NA
4589949	4589950	YPE_3585	YPE_3586	rpoH	tnp	FALSE	0.053	214.000	0.000	1.000	N	NA
4589952	4589953	YPE_3588	YPE_3589	livK	livH	TRUE	0.835	181.000	0.217	1.000	Y	NA
4589953	4589954	YPE_3589	YPE_3590	livH	livM	TRUE	0.999	-3.000	0.574	0.052	Y	NA
4589954	4589955	YPE_3590	YPE_3591	livM	livG	TRUE	0.999	-3.000	0.574	1.000	Y	NA
4589955	4589956	YPE_3591	YPE_3592	livG	livF	TRUE	0.996	45.000	0.967	0.017	Y	NA
4589956	4589957	YPE_3592	YPE_3593	livF		FALSE	0.107	228.000	0.000	NA		NA
4589958	4589959	YPE_3594	YPE_3595			TRUE	0.920	183.000	1.000	NA		NA
4589959	4589960	YPE_3595	YPE_3596			TRUE	0.940	62.000	0.600	NA		NA
4589960	4589961	YPE_3596	YPE_3597			TRUE	0.995	-28.000	0.600	NA		NA
4589961	4589962	YPE_3597	YPE_3598			TRUE	0.957	18.000	0.286	NA		NA
4589962	4589963	YPE_3598	YPE_3599			FALSE	0.068	267.000	0.000	NA		NA
4589964	4589965	YPE_3600	YPE_3601	ugpB	ugpA	TRUE	0.912	298.000	0.793	0.052	Y	NA
4589965	4589966	YPE_3601	YPE_3602	ugpA	ugpE	TRUE	0.999	-3.000	0.306	0.052	Y	NA
4589966	4589967	YPE_3602	YPE_3603	ugpE	ugpC	TRUE	0.996	7.000	0.272	0.052	Y	NA
4589967	4589968	YPE_3603	YPE_3604	ugpC	ugpQ	TRUE	0.798	-3.000	0.024	1.000	N	NA
4589968	4589969	YPE_3604	YPE_3605	ugpQ		FALSE	0.259	101.000	0.023	1.000		NA
4589969	4589970	YPE_3605	YPE_3606			FALSE	0.073	382.000	0.000	0.063		NA
4589974	4589975	YPE_3610	YPE_3611	udp		FALSE	0.104	121.000	0.030	1.000	N	NA
4589975	4589976	YPE_3611	YPE_3612			FALSE	0.217	358.000	0.000	1.000	Y	NA
4589976	4589977	YPE_3612	YPE_3613			FALSE	0.072	272.000	0.041	NA		NA
4589977	4589978	YPE_3613	YPE_3614		rmuC	FALSE	0.310	208.000	0.125	NA		NA
4589978	4589979	YPE_3614	YPE_3615	rmuC	ubiE	FALSE	0.338	92.000	0.047	NA		NA
4589979	4589980	YPE_3615	YPE_3616	ubiE		TRUE	0.853	32.000	0.145	1.000		NA
4589980	4589981	YPE_3616	YPE_3617		aarF	TRUE	0.994	0.000	0.432	1.000		NA
4589981	4589982	YPE_3617	YPE_3618	aarF	tatA	FALSE	0.177	180.000	0.025	1.000		NA
4589982	4589983	YPE_3618	YPE_3619	tatA	tatB	TRUE	0.991	4.000	0.130	1.000	Y	NA
4589983	4589984	YPE_3619	YPE_3620	tatB	tatC	TRUE	0.997	3.000	0.333	NA	Y	NA
4589984	4589985	YPE_3620	YPE_3622	tatC	tatD	TRUE	0.457	56.000	0.000	NA		NA
4589985	4589987	YPE_3622	YPE_3623	tatD		FALSE	0.304	87.000	0.000	NA		NA
4589987	4589988	YPE_3623	YPE_3624			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4589988	4589989	YPE_3624	YPE_3625		hemB	FALSE	0.012	389.000	0.000	1.000	N	NA
4589991	4589992	YPE_3627	YPE_3628		fre	TRUE	0.904	55.000	0.090	1.000	Y	NA
4589993	4589994	YPE_3629	YPE_3630	fadA	fadB	TRUE	0.997	12.000	0.607	1.000	Y	NA
4589995	4589996	YPE_3631	YPE_3633	pepQ	yigZ	TRUE	0.924	0.000	0.000	NA		NA
4589996	4589998	YPE_3633	YPE_3634	yigZ	tnp	FALSE	0.229	143.000	0.000	NA		NA
4589998	4589999	YPE_3634	YPE_3635	tnp	trkH	FALSE	0.007	589.000	0.000	1.000	N	NA
4589999	4590000	YPE_3635	YPE_3636	trkH	hemG	TRUE	0.963	22.000	0.455	1.000	N	NA
4590000	4590001	YPE_3636	YPE_3637	hemG		FALSE	0.023	475.000	0.000	NA		NA
4590002	4590003	YPE_3638	YPE_3639			FALSE	0.265	108.000	0.000	NA		NA
4590003	4590004	YPE_3639	YPE_3640		murB	FALSE	0.024	462.000	0.000	NA		NA
4590004	4590005	YPE_3640	YPE_3641	murB	birA	TRUE	0.982	-3.000	0.211	1.000	N	NA
4590006	4590007	YPE_3642	YPE_3643	coaA		FALSE	0.139	211.000	0.000	1.000		NA
4590008	4590009	YPE_3644	YPE_3645			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4590009	4590010	YPE_3645	YPE_3646			FALSE	0.024	464.000	0.000	NA		NA
4590010	4590011	YPE_3646	YPE_3647			TRUE	0.727	19.000	0.000	NA		NA
4590011	4590012	YPE_3647	YPE_3648			FALSE	0.224	150.000	0.000	NA		NA
4590012	4590013	YPE_3648	YPE_3649			TRUE	0.844	7.000	0.000	NA		NA
4590013	4590014	YPE_3649	YPE_3650		tufA	FALSE	0.264	109.000	0.000	NA		NA
4590014	4590015	YPE_3650	YPE_3651	tufA	secE	FALSE	0.015	251.000	0.009	1.000	N	NA
4590015	4590016	YPE_3651	YPE_3652	secE	nusG	TRUE	0.997	2.000	0.843	1.000	N	NA
4590016	4590017	YPE_3652	YPE_3653	nusG	rplK	TRUE	0.808	191.000	0.681	1.000	N	NA
4590017	4590018	YPE_3653	YPE_3654	rplK	rplA	TRUE	0.999	4.000	0.838	0.014	Y	NA
4590018	4590019	YPE_3654	YPE_3655	rplA	rplJ	TRUE	0.659	365.000	0.302	0.014	Y	NA
4590019	4590020	YPE_3655	YPE_3656	rplJ	rplL	TRUE	0.993	67.000	0.884	0.011	Y	NA
4590020	4590021	YPE_3656	YPE_3657	rplL	rpoB	FALSE	0.210	343.000	0.223	1.000		NA
4590021	4590022	YPE_3657	YPE_3658	rpoB	rpoC	TRUE	0.964	129.000	0.851	0.001		NA
4590025	4590026	YPE_3661	YPE_3662	thiH	thiG	TRUE	0.998	-7.000	0.277	0.002	Y	NA
4590026	4590027	YPE_3662	YPE_3663	thiG	thiF	TRUE	0.951	28.000	0.005	0.014	Y	NA
4590027	4590028	YPE_3663	YPE_3664	thiF	thiE	TRUE	0.996	-10.000	0.242	1.000	Y	NA
4590028	4590029	YPE_3664	YPE_3665	thiE	thiC	TRUE	0.984	14.000	0.063	0.002	Y	NA
4590029	4590030	YPE_3665	YPE_3666	thiC		TRUE	0.918	-7.000	0.000	NA		NA
4590030	4590031	YPE_3666	YPE_3667		rsd	FALSE	0.252	123.000	0.000	NA		NA
4590032	4590033	YPE_3668	YPE_3669	nudC		FALSE	0.294	93.000	0.000	NA		NA
4590033	4590034	YPE_3669	YPE_3670		hemE	FALSE	0.256	119.000	0.000	NA		NA
4590034	4590035	YPE_3670	YPE_3671	hemE	nfi	FALSE	0.166	66.000	0.028	1.000	N	NA
4590035	4590036	YPE_3671	YPE_3672	nfi		TRUE	0.692	46.000	0.086	1.000		NA
4590036	4590037	YPE_3672	YPE_3673		hupA	TRUE	0.694	189.000	0.355	1.000		NA
4590037	4590038	YPE_3673	YPE_3674	hupA		TRUE	0.992	2.000	0.375	NA		NA
4590039	4590040	YPE_3675	YPE_3676	purD	purH	TRUE	0.951	60.000	0.238	1.000	Y	NA
4590041	4590042	YPE_3677	YPE_3678			FALSE	0.271	103.000	0.000	NA		NA
4590042	4590043	YPE_3678	YPE_3679			TRUE	0.481	52.000	0.000	NA		NA
4590043	4590044	YPE_3679	YPE_3680			FALSE	0.120	219.000	0.000	NA		NA
4590045	4590046	YPE_3681	YPE_3682			FALSE	0.265	108.000	0.000	NA		NA
4590046	4590047	YPE_3682	YPE_3683			TRUE	0.776	14.000	0.000	NA		NA
4590047	4590048	YPE_3683	YPE_3684			TRUE	0.544	41.000	0.000	NA		NA
4590048	4590049	YPE_3684	YPE_3685		metA	FALSE	0.015	741.000	0.000	NA		NA
4590049	4590050	YPE_3685	YPE_3686	metA	aceB	FALSE	0.011	421.000	0.000	1.000	N	NA
4590050	4590051	YPE_3686	YPE_3687	aceB	aceA	TRUE	0.931	47.000	0.118	1.000	Y	NA
4590051	4590052	YPE_3687	YPE_3688	aceA	aceK	FALSE	0.309	256.000	0.273	1.000	N	NA
4590052	4590053	YPE_3688	YPE_3690	aceK	metH	FALSE	0.005	1179.000	0.000	1.000	N	NA
4590054	4590055	YPE_3691	YPE_3692		shlB	TRUE	0.924	70.000	0.600	NA		NA
4590055	4590056	YPE_3692	YPE_3693	shlB	lysC	FALSE	0.006	568.000	0.000	NA	N	NA
4590057	4590058	YPE_3694	YPE_3695	pgi		FALSE	0.206	135.000	0.015	1.000		NA
4590059	4590060	YPE_3696	YPE_3697	malG	malF	TRUE	0.998	14.000	0.814	0.052	Y	NA
4590060	4590061	YPE_3697	YPE_3698	malF	malE	TRUE	0.647	187.000	0.060	1.000	Y	NA
4590062	4590063	YPE_3699	YPE_3700		malK	TRUE	0.882	4.000	0.000	NA		NA
4590063	4590064	YPE_3700	YPE_3701	malK	lamB	TRUE	0.859	71.000	0.000	0.065	Y	NA
4590064	4590065	YPE_3701	YPE_3702	lamB	malM	FALSE	0.122	223.000	0.000	1.000		NA
4590065	4590066	YPE_3702	YPE_3703	malM		FALSE	0.029	411.000	0.000	NA		NA
4590068	4590069	YPE_3705	YPE_3706			TRUE	0.957	68.000	0.821	NA		NA
4590069	4590070	YPE_3706	YPE_3707			TRUE	0.992	7.000	0.627	NA		NA
4590070	4590071	YPE_3707	YPE_3709N			TRUE	0.924	0.000	0.000	NA		NA
4590073	4590074	YPE_3710	YPE_3711			TRUE	0.939	54.000	0.167	1.000	Y	NA
4590074	4590075	YPE_3711	YPE_3712		rpsO	FALSE	0.146	87.000	0.000	1.000	N	NA
4590075	4590076	YPE_3712	YPE_3713	rpsO	truB	TRUE	0.881	122.000	0.211	1.000	Y	NA
4590076	4590077	YPE_3713	YPE_3714	truB	rbfA	TRUE	0.998	0.000	0.318	1.000	Y	NA
4590077	4590078	YPE_3714	YPE_3715	rbfA	infB	TRUE	0.976	66.000	0.530	1.000	Y	NA
4590078	4590079	YPE_3715	YPE_3716	infB	nusA	TRUE	0.940	25.000	0.342	1.000	N	NA
4590079	4590080	YPE_3716	YPE_3717	nusA		TRUE	0.987	22.000	0.759	NA		NA
4590080	4590081	YPE_3717	YPE_3718			FALSE	0.130	210.000	0.000	NA		NA
4590081	4590082	YPE_3718	YPE_3719			TRUE	0.424	61.000	0.000	NA		NA
4590082	4590083	YPE_3719	YPE_3720		secG	FALSE	0.294	93.000	0.000	NA		NA
4590083	4590084	YPE_3720	YPE_3721	secG	mrsA	FALSE	0.026	223.000	0.016	1.000	N	NA
4590084	4590085	YPE_3721	YPE_3722	mrsA	folP	TRUE	0.960	10.000	0.260	1.000	N	NA
4590085	4590086	YPE_3722	YPE_3723	folP	ftsH	TRUE	0.704	120.000	0.325	1.000	N	NA
4590086	4590087	YPE_3723	YPE_3724	ftsH	ftsJ	TRUE	0.670	57.000	0.152	1.000	N	NA
4590090	4590091	YPE_3727	YPE_3728	dacB	basR	TRUE	0.894	6.000	0.101	1.000	N	NA
4590091	4590092	YPE_3728	YPE_3729	basR	basS	TRUE	0.998	-3.000	0.381	1.000	Y	NA
4590093	4590094	YPE_3730	YPE_3731			TRUE	0.900	1.000	0.015	1.000		NA
4590094	4590095	YPE_3731	YPE_3732		rpmA	FALSE	0.273	88.000	0.019	1.000		NA
4590095	4590096	YPE_3732	YPE_3733	rpmA	rplU	TRUE	0.997	20.000	0.667	0.011	Y	NA
4590098	4590099	YPE_3735	YPE_3736			FALSE	0.099	236.000	0.000	NA		NA
4590099	4590100	YPE_3736	YPE_3737		mdh	FALSE	0.029	409.000	0.000	NA		NA
4590101	4590102	YPE_3738	YPE_3739	argR		FALSE	0.031	389.000	0.000	NA		NA
4590104	4590105	YPE_3741	YPE_3742	fbp	ppa	FALSE	0.082	200.000	0.043	1.000	N	NA
4590106	4590107	YPE_3743	YPE_3744			TRUE	0.973	3.000	0.167	NA		NA
4590107	4590108	YPE_3744	YPE_3745			TRUE	0.997	-3.000	0.575	NA		NA
4590109	4590110	YPE_3746	YPE_3747	msrA		FALSE	0.071	278.000	0.042	NA		NA
4590114	4590115	YPE_3751	YPE_3752	cpdB		FALSE	0.072	155.000	0.030	NA	N	NA
4590117	4590118	YPE_3754	YPE_3755			FALSE	0.267	140.000	0.047	NA		NA
4590119	4590120	YPE_3756	YPE_3757	tnp	rplI	FALSE	0.068	196.000	0.000	1.000	N	NA
4590120	4590121	YPE_3757	YPE_3758	rplI	rpsR	TRUE	0.992	40.000	0.499	0.011	Y	NA
4590121	4590122	YPE_3758	YPE_3759	rpsR	priB	TRUE	0.928	5.000	0.128	1.000	N	NA
4590122	4590123	YPE_3759	YPE_3760	priB	rpsF	TRUE	0.914	6.000	0.122	1.000	N	NA
4590123	4590124	YPE_3760	YPE_3761	rpsF		TRUE	0.776	14.000	0.000	NA		NA
4590125	4590126	YPE_3762	YPE_3763			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4590126	4590127	YPE_3763	YPE_2700C		yqjG	FALSE	0.335	74.000	0.000	NA		NA
4590131	4590132	YPE_3767	YPE_3768	rnpB		TRUE	0.719	20.000	0.000	NA		NA
4590133	4590134	YPE_3769	YPE_3770			TRUE	0.657	84.000	0.172	NA		NA
4590134	4590135	YPE_3770	YPE_3771		diaA	FALSE	0.189	271.000	0.187	1.000	N	NA
4590135	4590136	YPE_3771	YPE_3772	diaA		TRUE	0.990	11.000	0.613	NA		NA
4590137	4590138	YPE_3773	YPE_3774	mtgA	elbB	TRUE	0.957	-3.000	0.066	NA		NA
4590138	4590139	YPE_3774	YPE_3775	elbB		TRUE	0.633	30.000	0.000	NA		NA
4590141	4590142	YPE_3777	YPE_3778	arcB		FALSE	0.172	264.000	0.113	1.000		NA
4590143	4590144	YPE_3779	YPE_3780	gltB	gltD	TRUE	0.991	10.000	0.096	0.000	Y	NA
4590144	4590145	YPE_3780	YPE_3781	gltD		FALSE	0.026	441.000	0.000	NA		NA
4590146	4590147	YPE_3782	YPE_3783	sspB	sspA	TRUE	0.996	6.000	0.831	NA		NA
4590147	4590148	YPE_3783	YPE_3784	sspA	rpsI	FALSE	0.007	374.000	0.014	1.000	N	NA
4590148	4590149	YPE_3784	YPE_3785	rpsI	rplM	TRUE	0.998	15.000	0.601	0.011	Y	NA
4590149	4590150	YPE_3785	YPE_3786	rplM		FALSE	0.032	314.000	0.003	NA		NA
4590151	4590152	YPE_3787	YPE_3788		degQ	FALSE	0.210	271.000	0.154	NA		NA
4590155	4590156	YPE_3791	YPE_3792	murA		TRUE	0.589	154.000	0.258	1.000	N	NA
4590156	4590157	YPE_3792	YPE_3793			TRUE	0.817	138.000	0.453	NA		NA
4590157	4590158	YPE_3793	YPE_3794			TRUE	0.925	36.000	0.308	NA		NA
4590158	4590159	YPE_3794	YPE_3795			TRUE	0.947	13.000	0.188	NA		NA
4590159	4590160	YPE_3795	YPE_3796			TRUE	0.992	5.000	0.562	NA		NA
4590160	4590161	YPE_3796	YPE_3797			TRUE	0.897	218.000	0.530	NA	Y	NA
4590162	4590163	YPE_3798	YPE_3799		kdsD	TRUE	0.604	111.000	0.226	1.000	N	NA
4590163	4590164	YPE_3799	YPE_3800	kdsD	kdsC	TRUE	0.670	249.000	0.598	1.000		NA
4590164	4590165	YPE_3800	YPE_3801	kdsC		TRUE	0.997	-3.000	0.617	NA		NA
4590165	4590166	YPE_3801	YPE_3802			TRUE	0.993	-16.000	0.459	NA		NA
4590166	4590167	YPE_3802	YPE_3803			TRUE	0.990	7.000	0.543	NA		NA
4590167	4590168	YPE_3803	YPE_3804		rpoN	TRUE	0.745	62.000	0.163	1.000		NA
4590168	4590169	YPE_3804	YPE_3806	rpoN	hpf	TRUE	0.688	24.000	0.000	NA		NA
4590169	4590171	YPE_3806	YPE_3807	hpf	ptsN	FALSE	0.256	118.000	0.000	NA		NA
4590171	4590172	YPE_3807	YPE_3808	ptsN		FALSE	0.203	306.000	0.186	NA		NA
4590172	4590173	YPE_3808	YPE_3809		ptsO	TRUE	0.985	-3.000	0.182	NA		NA
4590173	4590174	YPE_3809	YPE_3810	ptsO	pyrB	FALSE	0.017	338.000	0.000	1.000	N	NA
4590174	4590175	YPE_3810	YPE_3811	pyrB	pyrI	TRUE	0.994	12.000	0.197	0.000	Y	NA
4590175	4590176	YPE_3811	YPE_3812	pyrI		FALSE	0.244	138.000	0.084	NA	N	NA
4590176	4590177	YPE_3812	YPE_3813			FALSE	0.014	341.000	0.000	NA	N	NA
4590177	4590178	YPE_3813	YPE_3814			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4590178	4590179	YPE_3814	YPE_3815			FALSE	0.258	116.000	0.000	NA		NA
4590179	4590180	YPE_3815	YPE_3816		treR	FALSE	0.101	234.000	0.000	NA		NA
4590180	4590181	YPE_3816	YPE_3817	treR	treB	FALSE	0.014	375.000	0.000	1.000	N	NA
4590181	4590182	YPE_3817	YPE_3818	treB	treC	TRUE	0.972	95.000	0.650	1.000	Y	NA
4590182	4590183	YPE_3818	YPE_3819	treC	rnk	FALSE	0.016	353.000	0.000	1.000	N	NA
4590184	4590185	YPE_3820	YPE_3821	cybC		FALSE	0.133	208.000	0.000	NA		NA
4590185	4590186	YPE_3821	YPE_3822		pmbA	FALSE	0.054	255.000	0.005	NA		NA
4590188	4590189	YPE_3824	YPE_3825			TRUE	0.984	5.000	0.329	NA		NA
4590189	4590190	YPE_3825	YPE_3826			FALSE	0.130	210.000	0.000	NA		NA
4590190	4590192	YPE_3826	YPE_3828		aaeB	FALSE	0.068	267.000	0.000	NA		NA
4590192	4590193	YPE_3828	YPE_3829	aaeB	aaeA	TRUE	0.998	2.000	1.000	NA		NA
4590193	4590194	YPE_3829	YPE_3830	aaeA	aaeX	TRUE	0.949	8.000	0.150	NA		NA
4590195	4590196	YPE_3831	YPE_3832	aaeR		TRUE	0.475	261.000	0.000	0.048	Y	NA
4590196	4590197	YPE_3832	YPE_3833		tcaA	FALSE	0.099	236.000	0.000	NA		NA
4590197	4590198	YPE_3833	YPE_3835	tcaA	tcaC	FALSE	0.012	3690.000	0.000	NA		NA
4590198	4590199	YPE_3835	YPE_3836	tcaC		FALSE	0.240	134.000	0.000	NA		NA
4590199	4590200	YPE_3836	YPE_3837			TRUE	0.789	13.000	0.000	NA		NA
4590200	4590201	YPE_3837	YPE_3838			TRUE	0.994	-3.000	0.400	NA		NA
4590201	4590202	YPE_3838	YPE_3839		tccC1	TRUE	0.901	201.000	1.000	NA		NA
4590202	4590203	YPE_3839	YPE_3840	tccC1	tccC2	TRUE	0.964	25.000	0.000	0.010	Y	NA
4590204	4590205	YPE_3841	YPE_3842	tldD		TRUE	0.966	12.000	0.259	NA		NA
4590205	4590206	YPE_3842	YPE_3843			TRUE	0.994	-3.000	0.358	NA		NA
4590206	4590207	YPE_3843	YPE_3844		cafA	TRUE	0.776	94.000	0.296	NA		NA
4590207	4590208	YPE_3844	YPE_3845	cafA		TRUE	0.989	-10.000	0.417	NA	N	NA
4590208	4590209	YPE_3845	YPE_3846		mreD	TRUE	0.924	14.000	0.206	NA	N	NA
4590209	4590210	YPE_3846	YPE_3847	mreD	mreC	TRUE	0.999	-3.000	0.550	0.002	Y	NA
4590210	4590211	YPE_3847	YPE_3848	mreC	mreB	TRUE	0.779	204.000	0.689	1.000	N	NA
4590211	4590212	YPE_3848	YPE_3849	mreB	yhdA	FALSE	0.017	337.000	0.000	1.000	N	NA
4590213	4590214	YPE_3850	YPE_3851			FALSE	0.166	223.000	0.059	1.000		NA
4590214	4590215	YPE_3851	YPE_3852			TRUE	0.999	0.000	0.790	0.032		NA
4590215	4590216	YPE_3852	YPE_3853		aroQ	FALSE	0.055	263.000	0.006	1.000		NA
4590216	4590217	YPE_3853	YPE_3854	aroQ	accB	TRUE	0.582	158.000	0.254	1.000	N	NA
4590217	4590218	YPE_3854	YPE_3855	accB	accC	TRUE	0.996	12.000	0.275	0.000	Y	NA
4590218	4590219	YPE_3855	YPE_3856	accC		FALSE	0.078	1234.000	0.103	0.001		NA
4590219	4590220	YPE_3856	YPE_3857		panF	TRUE	0.996	-10.000	0.682	1.000		NA
4590220	4590221	YPE_3857	YPE_3858	panF	prmA	FALSE	0.192	76.000	0.041	1.000	N	NA
4590221	4590222	YPE_3858	YPE_3859	prmA	dusB	FALSE	0.120	589.000	0.042	1.000	Y	NA
4590222	4590223	YPE_3859	YPE_3860	dusB	fis	TRUE	0.846	25.000	0.161	1.000	N	NA
4590224	4590225	YPE_3861	YPE_3862			FALSE	0.103	231.000	0.000	NA		NA
4590225	4590226	YPE_3862	YPE_3863			FALSE	0.385	66.000	0.000	NA		NA
4590226	4590227	YPE_3863	YPE_3864			FALSE	0.315	90.000	0.000	1.000		NA
4590227	4590228	YPE_3864	YPE_3865			TRUE	0.420	154.000	0.105	1.000		NA
4590228	4590229	YPE_3865	YPE_3866			FALSE	0.374	178.000	0.105	1.000		NA
4590229	4590230	YPE_3866	YPE_3867			TRUE	0.414	65.000	0.000	1.000		NA
4590231	4590232	YPE_3868	YPE_3869	pcp		FALSE	0.064	276.000	0.000	NA		NA
4590232	4590233	YPE_3869	YPE_3870		cspA1	FALSE	0.294	93.000	0.000	NA		NA
4590233	4590234	YPE_3870	YPE_3871	cspA1	cspA2	TRUE	0.532	260.000	0.000	0.002	Y	NA
4590239	4590240	YPE_3876	YPE_3877			TRUE	0.979	-3.000	0.102	0.014	N	NA
4590240	4590241	YPE_3877	YPE_3878			TRUE	0.895	19.000	0.184	1.000	N	NA
4590241	4590242	YPE_3878	YPE_3879			TRUE	1.000	2.000	0.900	0.011	Y	NA
4590242	4590243	YPE_3879	YPE_3880			TRUE	0.999	-7.000	0.667	0.011	Y	NA
4590243	4590244	YPE_3880	YPE_3881			TRUE	0.942	204.000	0.714	NA	Y	NA
4590245	4590246	YPE_3882	YPE_3883	lpxP		FALSE	0.223	152.000	0.000	NA		NA
4590247	4590248	YPE_3884	YPE_3885			FALSE	0.043	349.000	0.000	1.000		NA
4590250	4590251	YPE_3887	YPE_3888	ssuB	ssuC	TRUE	0.999	-3.000	0.472	1.000	Y	NA
4590251	4590252	YPE_3888	YPE_3889	ssuC	ssuD	TRUE	0.955	9.000	0.226	1.000	N	NA
4590252	4590253	YPE_3889	YPE_3890	ssuD	ssuA	TRUE	0.952	19.000	0.341	1.000	N	NA
4590253	4590254	YPE_3890	YPE_3891	ssuA	ssuE	TRUE	0.934	15.000	0.169	1.000		NA
4590255	4590256	YPE_3892	YPE_3893			FALSE	0.100	154.000	0.000	1.000	N	NA
4590256	4590257	YPE_3893	YPE_3894			TRUE	0.977	6.000	0.000	1.000	Y	NA
4590259	4590260	YPE_3896	YPE_3897			TRUE	0.995	-3.000	0.455	NA		NA
4590261	4590262	YPE_3898	YPE_3899			TRUE	0.831	9.000	0.000	NA		NA
4590262	4590263	YPE_3899	YPE_3900			TRUE	0.520	45.000	0.000	NA		NA
4590263	4590264	YPE_3900	YPE_3901			TRUE	0.900	3.000	0.000	NA		NA
4590265	4590266	YPE_3902	YPE_3903			FALSE	0.033	382.000	0.000	NA		NA
4590267	4590268	YPE_3904	YPE_3905			TRUE	0.992	2.000	0.400	NA		NA
4590268	4590269	YPE_3905	YPE_3906			TRUE	0.649	28.000	0.000	NA		NA
4590269	4590270	YPE_3906	YPE_3907			TRUE	0.975	-7.000	0.143	NA		NA
4590270	4590271	YPE_3907	YPE_3908			TRUE	0.854	6.000	0.000	NA		NA
4590271	4590272	YPE_3908	YPE_3909			TRUE	0.703	22.000	0.000	NA		NA
4590272	4590273	YPE_3909	YPE_3910			TRUE	0.934	-3.000	0.000	NA		NA
4590273	4590274	YPE_3910	YPE_3911			TRUE	0.748	125.000	0.312	NA		NA
4590274	4590275	YPE_3911	YPE_3912			TRUE	0.981	32.000	0.750	NA		NA
4590275	4590276	YPE_3912	YPE_3913			TRUE	0.998	-3.000	0.711	NA		NA
4590276	4590277	YPE_3913	YPE_3914			TRUE	0.949	-3.000	0.053	NA		NA
4590277	4590278	YPE_3914	YPE_3915		clpV	TRUE	0.943	-3.000	0.039	1.000		NA
4590278	4590279	YPE_3915	YPE_3916	clpV		TRUE	0.985	11.000	0.471	NA		NA
4590279	4590280	YPE_3916	YPE_3917			TRUE	0.997	0.000	0.673	NA		NA
4590280	4590281	YPE_3917	YPE_3918			TRUE	0.997	3.000	0.765	NA		NA
4590281	4590282	YPE_3918	YPE_3919			TRUE	0.998	0.000	0.862	NA		NA
4590282	4590283	YPE_3919	YPE_3920			TRUE	0.855	126.000	0.510	NA		NA
4590283	4590284	YPE_3920	YPE_3709C			TRUE	0.900	3.000	0.000	NA		NA
4590288	4590289	YPE_3924	YPE_3925	pnp	nlpI	FALSE	0.376	125.000	0.071	1.000		NA
4590289	4590290	YPE_3925	YPE_3926	nlpI	deaD	FALSE	0.226	187.000	0.053	1.000		NA
4590290	4590291	YPE_3926	YPE_3927	deaD		TRUE	0.719	20.000	0.000	NA		NA
4590291	4590292	YPE_3927	YPE_3928			TRUE	0.533	43.000	0.000	NA		NA
4590292	4590293	YPE_3928	YPE_3929			TRUE	0.688	24.000	0.000	NA		NA
4590295	4590296	YPE_3931	YPE_3932			TRUE	0.941	4.000	0.133	1.000	N	NA
4590296	4590297	YPE_3932	YPE_3933		ibeB	TRUE	0.993	2.000	0.367	0.051	N	NA
4590298	4590299	YPE_3934	YPE_3935			TRUE	0.999	12.000	0.948	0.002	Y	NA
4590299	4590300	YPE_3935	YPE_3936			FALSE	0.262	110.000	0.000	NA		NA
4590301	4590302	YPE_3937	YPE_3938			TRUE	0.991	-6.000	0.295	1.000		NA
4590303	4590304	YPE_3939	YPE_3940			FALSE	0.110	231.000	0.000	1.000		NA
4590304	4590305	YPE_3940	YPE_3941			TRUE	0.983	24.000	0.400	0.001		NA
4590306	4590307	YPE_3942	YPE_3943			TRUE	0.998	8.000	0.611	0.051	Y	NA
4590307	4590308	YPE_3943	YPE_3944			TRUE	0.997	19.000	0.611	0.051	Y	NA
4590308	4590309	YPE_3944	YPE_3945			TRUE	0.996	12.000	0.364	0.051	Y	NA
4590309	4590310	YPE_3945	YPE_3946			TRUE	0.962	15.000	0.273	1.000		NA
4590310	4590311	YPE_3946	YPE_3947			FALSE	0.289	99.000	0.032	1.000		NA
4590311	4590312	YPE_3947	YPE_3948			FALSE	0.301	152.000	0.056	1.000		NA
4590313	4590314	YPE_3949	YPE_3950	phnP	phnN	TRUE	0.983	-9.000	0.214	NA		NA
4590314	4590315	YPE_3950	YPE_3951	phnN	phnM	TRUE	0.997	0.000	0.235	NA	Y	NA
4590315	4590316	YPE_3951	YPE_3952	phnM	phnL	TRUE	0.998	-3.000	0.320	1.000	Y	NA
4590316	4590317	YPE_3952	YPE_3953	phnL	phnK	TRUE	0.875	389.000	0.859	0.017	Y	NA
4590317	4590318	YPE_3953	YPE_3954	phnK	phnJ	TRUE	0.999	0.000	0.883	1.000	Y	NA
4590318	4590319	YPE_3954	YPE_3955	phnJ	phnI	TRUE	0.999	-7.000	0.880	1.000	Y	NA
4590319	4590320	YPE_3955	YPE_3956	phnI	phnH	TRUE	1.000	0.000	0.960	0.002	Y	NA
4590320	4590321	YPE_3956	YPE_3957	phnH	phnG	TRUE	1.000	0.000	0.967	0.002	Y	NA
4590321	4590322	YPE_3957	YPE_3958	phnG	phnF	TRUE	0.996	1.000	0.691	1.000	N	NA
4590322	4590323	YPE_3958	YPE_3959	phnF	nrdG	FALSE	0.018	328.000	0.000	1.000	N	NA
4590323	4590324	YPE_3959	YPE_3960	nrdG	nrdD	TRUE	0.638	207.000	0.464	1.000	N	NA
4590324	4590325	YPE_3960	YPE_3961	nrdD		FALSE	0.011	434.000	0.000	1.000	N	NA
4590325	4590326	YPE_3961	YPE_3962			TRUE	0.999	2.000	0.550	0.017	Y	NA
4590326	4590327	YPE_3962	YPE_3963			TRUE	0.997	-7.000	0.324	1.000	Y	NA
4590327	4590328	YPE_3963	YPE_3964			TRUE	0.995	19.000	0.441	0.051	Y	NA
4590328	4590329	YPE_3964	YPE_3965			FALSE	0.287	96.000	0.000	NA		NA
4590334	4590335	YPE_3970	YPE_3971		valS	TRUE	0.649	143.000	0.008	1.000	Y	NA
4590335	4590336	YPE_3971	YPE_3972	valS	holC	TRUE	0.821	13.000	0.089	1.000	N	NA
4590336	4590337	YPE_3972	YPE_3973	holC	pepA	TRUE	0.778	151.000	0.494	1.000	N	NA
4590338	4590339	YPE_3974	YPE_3975			TRUE	0.998	0.000	0.631	0.061		NA
4590339	4590340	YPE_3975	YPE_3976			FALSE	0.268	105.000	0.000	NA		NA
4590340	4590341	YPE_3976	YPE_3977		intB	FALSE	0.152	199.000	0.000	NA		NA
4590341	4590342	YPE_3977	YPE_3978	intB		FALSE	0.221	154.000	0.000	NA		NA
4590342	4590343	YPE_3978	YPE_3980			TRUE	0.918	-7.000	0.000	NA		NA
4590345	4590346	YPE_3981	YPE_3982			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4590348	4590349	YPE_3984	YPE_3985			TRUE	0.696	186.000	0.356	NA		NA
4590349	4590350	YPE_3985	YPE_3986		coaE	TRUE	0.973	-3.000	0.110	NA		NA
4590350	4590351	YPE_3986	YPE_3987	coaE		TRUE	0.823	10.000	0.000	NA		NA
4590353	4590354	YPE_3989	YPE_3990	hofC	hofB	TRUE	0.999	-3.000	0.571	1.000	Y	NA
4590354	4590355	YPE_3990	YPE_3991	hofB	ppdD	TRUE	0.999	-7.000	0.556	NA	Y	NA
4590355	4590356	YPE_3991	YPE_3992	ppdD	nadC	FALSE	0.023	203.000	0.015	NA	N	NA
4590357	4590358	YPE_3993	YPE_3994	ampD	ampE	TRUE	0.618	290.000	0.249	1.000	Y	NA
4590360	4590361	YPE_3996	YPE_3997	pdhR	aceE	TRUE	0.508	196.000	0.276	1.000	N	NA
4590361	4590362	YPE_3997	YPE_3998	aceE	aceF	TRUE	0.988	14.000	0.220	1.000	Y	NA
4590362	4590363	YPE_3998	YPE_3999	aceF	lpdA	TRUE	0.748	303.000	0.463	1.000	Y	NA
4590363	4590364	YPE_3999	YPE_4000	lpdA	tnp	FALSE	0.038	243.000	0.000	1.000	N	NA
4590364	4590365	YPE_4000	YPE_4001	tnp	acnB	FALSE	0.007	570.000	0.000	1.000	N	NA
4590365	4590366	YPE_4001	YPE_4002	acnB		FALSE	0.086	299.000	0.068	NA		NA
4590367	4590368	YPE_4003	YPE_4004		speD	FALSE	0.028	438.000	0.000	1.000		NA
4590368	4590369	YPE_4004	YPE_4005	speD	speE	TRUE	0.890	78.000	0.162	1.000	Y	NA
4590369	4590370	YPE_4005	YPE_4006	speE		TRUE	0.787	117.000	0.354	NA		NA
4590371	4590372	YPE_4007	YPE_4008	cueO	hpt	FALSE	0.023	220.000	0.010	1.000	N	NA
4590374	4590375	YPE_4010	YPE_4011			TRUE	0.999	-3.000	0.688	0.086	Y	NA
4590375	4590376	YPE_4011	YPE_4012			FALSE	0.018	327.000	0.000	1.000	N	NA
4590377	4590378	YPE_4013	YPE_4014	panD	panC	TRUE	0.530	411.000	0.342	1.000	Y	NA
4590378	4590379	YPE_4014	YPE_4015	panC	panB	TRUE	0.974	88.000	0.395	0.000	Y	NA
4590379	4590380	YPE_4015	YPE_4016	panB	folK	TRUE	0.487	266.000	0.117	1.000	Y	NA
4590380	4590381	YPE_4016	YPE_4017	folK	pcnB	TRUE	0.959	8.000	0.234	1.000	N	NA
4590381	4590382	YPE_4017	YPE_4018	pcnB		TRUE	0.923	56.000	0.131	1.000	Y	NA
4590382	4590383	YPE_4018	YPE_4019		dksA	FALSE	0.231	280.000	0.231	1.000	N	NA
4590383	4590384	YPE_4019	YPE_4020	dksA	sfsA	TRUE	0.484	170.000	0.151	NA		NA
4590384	4590385	YPE_4020	YPE_4021	sfsA	ligT	FALSE	0.290	113.000	0.045	NA		NA
4590386	4590387	YPE_4022	YPE_4023	hrpB	mrcB	TRUE	0.655	109.000	0.158	0.011	N	NA
4590387	4590388	YPE_4023	YPE_4024	mrcB	fhuC	FALSE	0.019	322.000	0.000	1.000	N	NA
4590388	4590389	YPE_4024	YPE_4025	fhuC	fhuD	TRUE	0.723	177.000	0.094	1.000	Y	NA
4590389	4590390	YPE_4025	YPE_4026	fhuD	fhuB	TRUE	0.999	-3.000	0.500	1.000	Y	NA
4590392	4590393	YPE_4028	YPE_4029			FALSE	0.243	136.000	0.031	1.000		NA
4590394	4590395	YPE_4030	YPE_4031		btuF	TRUE	0.985	0.000	0.213	NA		NA
4590395	4590396	YPE_4031	YPE_4032	btuF	pfs	TRUE	0.922	0.000	0.073	1.000	N	NA
4590397	4590398	YPE_4033	YPE_4034	dgt	htrA	FALSE	0.207	198.000	0.101	1.000	N	NA
4590400	4590401	YPE_4036	YPE_4037	relA		TRUE	0.576	37.000	0.000	NA		NA
4590401	4590402	YPE_4037	YPE_4038			TRUE	0.844	7.000	0.000	NA		NA
4590402	4590403	YPE_4038	YPE_4039		pyrG	FALSE	0.122	212.000	0.025	1.000		NA
4590403	4590404	YPE_4039	YPE_4040	pyrG	eno	FALSE	0.292	81.000	0.068	1.000	N	NA
4590404	4590405	YPE_4040	YPE_4041	eno	sodC	FALSE	0.014	372.000	0.000	1.000	N	NA
4590405	4590406	YPE_4041	YPE_4042	sodC		FALSE	0.047	104.000	0.004	1.000	N	NA
4590408	4590409	YPE_4044	YPE_4045	cysJ	cysI	TRUE	1.000	0.000	0.791	0.000	Y	NA
4590409	4590410	YPE_4045	YPE_4047	cysI	cysH	TRUE	0.934	-3.000	0.000	NA		NA
4590413	4590414	YPE_4049	YPE_4050		cysG	FALSE	0.053	301.000	0.000	NA		NA
4590414	4590415	YPE_4050	YPE_4051	cysG	cysD	TRUE	0.995	11.000	0.417	1.000	Y	NA
4590415	4590416	YPE_4051	YPE_4052	cysD	cysN	TRUE	0.930	93.000	0.574	0.000	N	NA
4590416	4590417	YPE_4052	YPE_4053	cysN	cysC	TRUE	0.997	2.000	0.340	1.000	Y	NA
4590417	4590418	YPE_4053	YPE_4054	cysC		TRUE	0.498	191.000	0.198	NA		NA
4590418	4590419	YPE_4054	YPE_4055			FALSE	0.043	314.000	0.028	NA		NA
4590419	4590420	YPE_4055	YPE_4056		ispD	TRUE	0.960	4.000	0.185	1.000	N	NA
4590420	4590421	YPE_4056	YPE_4057	ispD	ispF	TRUE	0.935	139.000	0.419	1.000	Y	NA
4590421	4590422	YPE_4057	YPE_4058	ispF	truD	TRUE	0.950	11.000	0.173	1.000		NA
4590422	4590423	YPE_4058	YPE_4059	truD	surE	TRUE	0.983	-22.000	0.235	1.000		NA
4590423	4590424	YPE_4059	YPE_4060	surE	pcm	TRUE	0.993	-6.000	0.353	1.000		NA
4590424	4590425	YPE_4060	YPE_4061	pcm	nlpD	FALSE	0.111	104.000	0.030	1.000	N	NA
4590425	4590426	YPE_4061	YPE_4062	nlpD	rpoS	TRUE	0.661	55.000	0.142	1.000	N	NA
4590427	4590428	YPE_4063	YPE_4064	mutS	rpiB	FALSE	0.006	794.000	0.000	1.000	N	NA
4590429	4590430	YPE_4065	YPE_4066			TRUE	0.507	64.000	0.000	0.016	N	NA
4590430	4590431	YPE_4066	YPE_4067		dhaK	FALSE	0.243	87.000	0.058	1.000	N	NA
4590431	4590432	YPE_4067	YPE_4068	dhaK		TRUE	0.996	7.000	0.211	0.001	Y	NA
4590433	4590434	YPE_4069	YPE_4070		arsB	FALSE	0.007	567.000	0.000	1.000	N	NA
4590434	4590435	YPE_4070	YPE_4071	arsB	arsR	FALSE	0.148	85.000	0.000	1.000	N	NA
4590435	4590436	YPE_4071	YPE_4072	arsR		FALSE	0.091	247.000	0.000	1.000		NA
4590436	4590437	YPE_4072	YPE_4073			FALSE	0.157	196.000	0.000	NA		NA
4590437	4590438	YPE_4073	YPE_4074			FALSE	0.028	421.000	0.000	NA		NA
4590438	4590439	YPE_4074	YPE_4075			FALSE	0.204	65.000	0.000	1.000	N	NA
4590440	4590442	YPE_4077	YPE_4078			FALSE	0.027	433.000	0.000	NA		NA
4590443	4590444	YPE_4079	YPE_4080	map		TRUE	0.994	-3.000	0.410	NA		NA
4590444	4590445	YPE_4080	YPE_4081		fumA	FALSE	0.245	129.000	0.000	NA		NA
4590445	4590446	YPE_4081	YPE_4082	fumA	lyxK	FALSE	0.012	398.000	0.000	1.000	N	NA
4590446	4590447	YPE_4082	YPE_4083	lyxK	sgbU	TRUE	0.999	11.000	1.000	0.014	Y	NA
4590447	4590448	YPE_4083	YPE_4084	sgbU		TRUE	0.807	206.000	0.250	1.000	Y	NA
4590448	4590449	YPE_4084	YPE_4085			TRUE	0.999	13.000	0.938	0.011	Y	NA
4590449	4590450	YPE_4085	YPE_4086			TRUE	1.000	-7.000	0.941	0.011	Y	NA
4590450	4590451	YPE_4086	YPE_4087		tnp	FALSE	0.101	151.000	0.000	1.000	N	NA
4590451	4590452	YPE_4087	YPE_4088	tnp		FALSE	0.028	251.000	0.000	NA	N	NA
4590452	4590453	YPE_4088	YPE_4089			TRUE	0.945	62.000	0.235	NA	Y	NA
4590454	4590455	YPE_4090	YPE_4091	araD	dmsA	FALSE	0.010	463.000	0.000	1.000	N	NA
4590455	4590456	YPE_4091	YPE_4092	dmsA	dmsB	TRUE	0.987	12.000	0.103	0.032	Y	NA
4590456	4590457	YPE_4092	YPE_4093	dmsB	dmsC	TRUE	0.994	2.000	0.500	1.000		NA
4590457	4590458	YPE_4093	YPE_4094	dmsC	dmsD	TRUE	0.475	146.000	0.125	1.000		NA
4590459	4590460	YPE_4095	YPE_4096	cybB	cybC1	TRUE	0.774	148.000	0.000	0.032	Y	NA
4590460	4590461	YPE_4096	YPE_4097	cybC1	katY	TRUE	0.477	77.000	0.000	0.004	N	NA
4590462	4590463	YPE_4098	YPE_4099			TRUE	0.762	93.000	0.280	NA		NA
4590463	4590464	YPE_4099	YPE_4100			TRUE	0.990	0.000	0.292	NA		NA
4590464	4590465	YPE_4100	YPE_4101			TRUE	1.000	-3.000	0.793	0.011	Y	NA
4590465	4590466	YPE_4101	YPE_4102			TRUE	0.450	256.000	0.075	1.000	Y	NA
4590466	4590467	YPE_4102	YPE_4103			TRUE	1.000	-7.000	0.860	0.001	Y	NA
4590467	4590468	YPE_4103	YPE_4104			TRUE	0.993	3.000	0.596	1.000	N	NA
4590468	4590469	YPE_4104	YPE_4105			TRUE	0.828	21.000	0.127	1.000	N	NA
4590470	4590471	YPE_4106	YPE_4107			FALSE	0.090	248.000	0.000	1.000		NA
4590472	4590473	YPE_4108	YPE_4109		recA	FALSE	0.400	115.000	0.082	NA		NA
4590473	4590474	YPE_4109	YPE_4110	recA	recX	TRUE	0.727	138.000	0.296	1.000		NA
4590474	4590475	YPE_4110	YPE_4111	recX	alaS	FALSE	0.388	140.000	0.085	1.000		NA
4590475	4590476	YPE_4111	YPE_4112	alaS	csrA	FALSE	0.021	250.000	0.020	1.000	N	NA
4590476	4590477	YPE_4112	YPE_4113	csrA		FALSE	0.036	363.000	0.000	NA		NA
4590477	4590478	YPE_4113	YPE_4114			TRUE	0.831	9.000	0.000	NA		NA
4590478	4590479	YPE_4114	YPE_4115			TRUE	0.445	58.000	0.000	NA		NA
4590479	4590480	YPE_4115	YPE_4116			FALSE	0.319	80.000	0.000	NA		NA
4590480	4590481	YPE_4116	YPE_4117			FALSE	0.027	423.000	0.000	NA		NA
4590481	4590482	YPE_4117	YPE_4118			TRUE	0.958	-3.000	0.067	NA		NA
4590482	4590483	YPE_4118	YPE_4119		gshA	TRUE	0.435	83.000	0.071	NA		NA
4590485	4590486	YPE_4121	YPE_4122	luxS	tnp	FALSE	0.060	204.000	0.000	1.000	N	NA
4590486	4590487	YPE_4122	YPE_4123	tnp	tnp	TRUE	0.505	253.000	0.000	0.022	Y	NA
4590488	4590489	YPE_4124	YPE_4125	yfjD		TRUE	0.856	69.000	0.349	NA		NA
4590490	4590491	YPE_4126	YPE_4127	ffh	rpsP	TRUE	0.491	228.000	0.361	1.000	N	NA
4590491	4590492	YPE_4127	YPE_4128	rpsP	rimM	TRUE	0.993	22.000	0.342	0.011	Y	NA
4590492	4590493	YPE_4128	YPE_4129	rimM	trmD	TRUE	0.992	39.000	0.672	1.000	Y	NA
4590493	4590494	YPE_4129	YPE_4130	trmD	rplS	TRUE	0.971	81.000	0.567	1.000	Y	NA
4590494	4590495	YPE_4130	YPE_4131	rplS	tnp	FALSE	0.054	212.000	0.000	1.000	N	NA
4590496	4590497	YPE_4132	YPE_4133			FALSE	0.046	323.000	0.000	NA		NA
4590497	4590499	YPE_4133	YPE_4135			FALSE	0.027	429.000	0.000	NA		NA
4590500	4590501	YPE_4136	YPE_4137	aroF	tyrA	TRUE	0.961	13.000	0.023	1.000	Y	NA
4590502	4590504	YPE_4138	YPE_4139	pheA		FALSE	0.346	72.000	0.000	NA		NA
4590504	4590505	YPE_4139	YPE_4140			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4590507	4590508	YPE_4143	YPE_4144			FALSE	0.026	355.000	0.004	NA		NA
4590509	4590510	YPE_4145	YPE_4146	rluD		TRUE	0.978	2.000	0.168	1.000		NA
4590510	4590511	YPE_4146	YPE_4147		clpB	TRUE	0.458	130.000	0.108	1.000		NA
4590511	4590512	YPE_4147	YPE_4148	clpB		FALSE	0.021	517.000	0.000	NA		NA
4590513	4590514	YPE_4341	YPE_4342	rop		FALSE	0.014	1037.000	0.000	NA		NA
4590514	4590515	YPE_4342	YPE_4343			TRUE	0.990	-3.000	0.000	1.000	Y	NA
4590516	4590517	YPE_4344	YPE_4345			TRUE	0.993	0.000	0.400	NA		NA
4590518	4590519	YPE_4346	YPE_4347	pla		FALSE	0.091	243.000	0.000	NA		NA
3661901	3661902	YPE_4149	YPE_4150			TRUE	0.987	-7.000	0.250	NA		NA
3661903	3661904	YPE_4151	YPE_4152		yopE	TRUE	0.912	2.000	0.000	NA		NA
3661908	3661909	YPE_4156	YPE_4157			TRUE	0.989	0.000	0.000	1.000	Y	NA
3661910	3661911	YPE_4158	YPE_4159			TRUE	0.998	0.000	1.000	1.000		NA
3661911	3661912	YPE_4159	YPE_4160		sycH	FALSE	0.044	343.000	0.000	1.000		NA
3661913	3661914	YPE_4161	YPE_4162			TRUE	0.835	24.000	0.000	0.069		NA
3661914	3661915	YPE_4162	YPE_4163			FALSE	0.277	100.000	0.000	NA		NA
3661915	3661916	YPE_4163	YPE_4164			FALSE	0.017	622.000	0.000	NA		NA
3661921	3661922	YPE_4171	YPE_4172			FALSE	0.208	166.000	0.000	NA		NA
3661922	3661923	YPE_4172	YPE_4173			TRUE	0.940	24.000	0.250	1.000		NA
3661923	3661924	YPE_4173	YPE_4175		nuc	FALSE	0.028	417.000	0.000	NA		NA
3661924	3661925	YPE_4175	YPE_4176	nuc		FALSE	0.234	138.000	0.000	NA		NA
3661927	3661928	YPE_4178	YPE_4179			TRUE	0.918	-7.000	0.000	NA		NA
3661928	3661929	YPE_4179	YPE_4180			FALSE	0.013	1807.000	0.000	NA		NA
3661929	3661930	YPE_4180	YPE_4181		sycO	FALSE	0.095	240.000	0.000	NA		NA
3661930	3661931	YPE_4181	YPE_4182	sycO	ypkA	TRUE	0.979	8.000	0.308	1.000		NA
3661931	3661932	YPE_4182	YPE_4183	ypkA	yopJ	FALSE	0.030	396.000	0.000	NA		NA
3661932	3661933	YPE_4183	YPE_4184	yopJ		FALSE	0.025	456.000	0.000	NA		NA
3661935	3661936	YPE_4186	YPE_4187		yopH	FALSE	0.062	283.000	0.000	NA		NA
3661937	3661938	YPE_4188	YPE_4189			TRUE	0.789	13.000	0.000	NA		NA
3661938	3661939	YPE_4189	YPE_4190			TRUE	0.975	-3.000	0.000	0.011		NA
3661939	3661940	YPE_4190	YPE_4191			TRUE	0.705	24.000	0.000	1.000		NA
3661940	3661941	YPE_4191	YPE_4192		lcrQ	FALSE	0.021	548.000	0.000	1.000		NA
3661941	3661942	YPE_4192	YPE_4193	lcrQ	yscL	FALSE	0.118	225.000	0.000	1.000		NA
3661942	3661943	YPE_4193	YPE_4194	yscL	yscK	TRUE	0.996	-54.000	0.727	1.000		NA
3661943	3661944	YPE_4194	YPE_4195	yscK	yscJ	TRUE	0.998	0.000	0.800	1.000		NA
3661944	3661945	YPE_4195	YPE_4196	yscJ	yscI	TRUE	0.990	7.000	0.333	0.010		NA
3661945	3661946	YPE_4196	YPE_4197	yscI	yscH	TRUE	0.995	1.000	0.333	0.006		NA
3661946	3661947	YPE_4197	YPE_4198	yscH	yscG	TRUE	0.999	-3.000	0.900	0.006		NA
3661947	3661948	YPE_4198	YPE_4199	yscG	yscF	TRUE	0.997	2.000	0.556	0.006		NA
3661948	3661949	YPE_4199	YPE_4200	yscF	yscE	TRUE	0.996	1.000	0.417	0.006		NA
3661949	3661950	YPE_4200	YPE_4201	yscE	yscD	TRUE	0.991	-3.000	0.268	NA		NA
3661950	3661951	YPE_4201	YPE_4202	yscD	yscC	TRUE	0.988	-3.000	0.220	NA		NA
3661951	3661952	YPE_4202	YPE_4203	yscC	yscB	TRUE	0.995	6.000	0.750	1.000		NA
3661952	3661953	YPE_4203	YPE_4204	yscB	yscA	FALSE	0.110	226.000	0.000	NA		NA
3661953	3661954	YPE_4204	YPE_4205	yscA	lcrF	TRUE	0.639	79.000	0.154	NA		NA
3661954	3661955	YPE_4205	YPE_4206	lcrF	virG	TRUE	0.557	124.000	0.154	NA		NA
3661955	3661956	YPE_4206	YPE_4207	virG	yscU	FALSE	0.018	576.000	0.000	NA		NA
3661956	3661957	YPE_4207	YPE_4208	yscU	yscT	TRUE	0.999	0.000	0.548	0.061	Y	NA
3661957	3661958	YPE_4208	YPE_4209	yscT	yscS	TRUE	0.994	-3.000	0.000	0.061	Y	NA
3661958	3661959	YPE_4209	YPE_4210	yscS	yscR	TRUE	0.993	2.000	0.000	0.010	Y	NA
3661959	3661960	YPE_4210	YPE_4211	yscR	yscQ	TRUE	0.999	-3.000	0.529	1.000	Y	NA
3661960	3661961	YPE_4211	YPE_4212	yscQ	yscP	TRUE	0.994	-3.000	0.235	0.008		NA
3661961	3661962	YPE_4212	YPE_4213	yscP	yscO	TRUE	0.978	0.000	0.150	NA		NA
3661962	3661963	YPE_4213	YPE_4214	yscO	yscN	TRUE	0.992	-3.000	0.300	NA		NA
3661964	3661965	YPE_4215	YPE_4216	yopN	tyeA	TRUE	0.962	-19.000	0.125	NA		NA
3661965	3661966	YPE_4216	YPE_4217	tyeA	sycN	TRUE	0.981	-13.000	0.214	NA		NA
3661966	3661967	YPE_4217	YPE_4218	sycN	yscX	TRUE	0.934	-3.000	0.000	NA		NA
3661967	3661968	YPE_4218	YPE_4219	yscX	yscY	TRUE	0.934	-3.000	0.000	NA		NA
3661968	3661969	YPE_4219	YPE_4220	yscY	lcrD	TRUE	0.937	-13.000	0.062	1.000		NA
3661969	3661970	YPE_4220	YPE_4221	lcrD	lcrR	TRUE	0.991	-3.000	0.281	NA		NA
3661970	3661971	YPE_4221	YPE_4222	lcrR	lcrG	TRUE	0.984	42.000	1.000	NA		NA
3661971	3661972	YPE_4222	YPE_4223	lcrG	lcrV	TRUE	0.995	2.000	0.556	NA		NA
3661972	3661973	YPE_4223	YPE_4224	lcrV	lcrH	TRUE	0.961	13.000	0.235	1.000		NA
3661973	3661974	YPE_4224	YPE_4225	lcrH	yopB	TRUE	0.995	-22.000	0.632	1.000		NA
3661974	3661975	YPE_4225	YPE_4226	yopB	yopD	TRUE	0.980	19.000	0.526	NA		NA
3661975	3661976	YPE_4226	YPE_4227	yopD	yopM	FALSE	0.013	1729.000	0.000	NA		NA
3661977	3661978	YPE_4228	YPE_4229			FALSE	0.014	876.000	0.000	NA		NA
3661980	3661981	YPE_4231	YPE_4232	sycT	yopT	TRUE	0.997	0.000	0.500	0.006		NA
3661982	3661983	YPE_4233	YPE_4235	yopK	ylpA	FALSE	0.022	489.000	0.000	NA		NA
3661983	3661984	YPE_4235	YPE_4236	ylpA		FALSE	0.275	101.000	0.000	NA		NA
3661984	3661985	YPE_4236	YPE_4237			TRUE	0.960	24.000	0.250	0.069		NA
3661985	3661986	YPE_4237	YPE_4238			FALSE	0.015	1106.000	0.000	1.000		NA
3661986	3661900	YPE_4238	YPE_4239		sopB	TRUE	0.991	0.000	0.400	1.000	N	NA
3661900	3661901	YPE_4239	YPE_4149	sopB		FALSE	0.088	1229.000	0.000	1.000	Y	NA
3661988	3661989	YPE_4240	YPE_4241	parB		FALSE	0.035	379.000	0.000	1.000		NA
3661991	3661992	YPE_4243	YPE_4244			TRUE	0.997	0.000	0.667	NA		NA
3661992	3661993	YPE_4244	YPE_4245			TRUE	0.995	-61.000	0.667	NA		NA
3661993	3661994	YPE_4245	YPE_4246			TRUE	0.959	54.000	0.667	NA		NA
3661994	3661995	YPE_4246	YPE_4247			FALSE	0.030	399.000	0.000	NA		NA
3661995	3661996	YPE_4247	YPE_4248			FALSE	0.016	713.000	0.000	NA		NA
3661996	3661997	YPE_4248	YPE_4249			FALSE	0.339	73.000	0.000	NA		NA
3661997	3661998	YPE_4249	YPE_4250			FALSE	0.304	124.000	0.000	0.069	N	NA
3661998	3661999	YPE_4250	YPE_4251			TRUE	0.990	-3.000	0.000	1.000	Y	NA
3661999	3662000	YPE_4251	YPE_4252			FALSE	0.019	552.000	0.000	NA		NA
3662002	3662003	YPE_4254	YPE_4255			TRUE	0.947	120.000	1.000	NA		NA
3662003	3662004	YPE_4255	YPE_4256			TRUE	0.419	61.000	0.033	NA		NA
3662004	3662005	YPE_4256	YPE_4257			TRUE	0.924	0.000	0.000	NA		NA
3662005	3662006	YPE_4257	YPE_4258			TRUE	0.900	3.000	0.000	NA		NA
3662006	3662007	YPE_4258	YPE_4259			FALSE	0.216	91.000	0.002	NA		NA
3662007	3662008	YPE_4259	YPE_4260			TRUE	0.995	4.000	0.667	NA		NA
3662008	3662009	YPE_4260	YPE_4261			TRUE	0.881	154.000	0.667	NA		NA
3662009	3662010	YPE_4261	YPE_4262			TRUE	0.996	-16.000	0.667	NA		NA
3662010	3662011	YPE_4262	YPE_4263			TRUE	0.968	68.000	1.000	NA		NA
3662011	3662012	YPE_4263	YPE_4264			TRUE	0.984	41.000	1.000	NA		NA
3662012	3662013	YPE_4264	YPE_4265			TRUE	0.934	-3.000	0.000	NA		NA
3662013	3662014	YPE_4265	YPE_4266			TRUE	0.997	-3.000	0.667	NA		NA
3662016	3662017	YPE_4268	YPE_4269			FALSE	0.330	76.000	0.000	NA		NA
3662019	3662020	YPE_4271	YPE_4272			TRUE	0.946	-3.000	0.049	NA		NA
3662020	3662021	YPE_4272	YPE_4273			TRUE	0.984	9.000	0.400	NA		NA
3662021	3662022	YPE_4273	YPE_4274			TRUE	0.992	-10.000	0.400	NA		NA
3662022	3662023	YPE_4274	YPE_4275			TRUE	0.710	13.000	0.002	NA		NA
3662023	3662024	YPE_4275	YPE_4276			FALSE	0.140	209.000	0.000	1.000		NA
3662024	3662025	YPE_4276	YPE_4277			FALSE	0.161	194.000	0.000	NA		NA
3662025	3662026	YPE_4277	YPE_4278			FALSE	0.136	206.000	0.000	NA		NA
3662027	3662028	YPE_4279	YPE_4280			TRUE	0.921	85.000	0.667	NA		NA
3662028	3662029	YPE_4280	YPE_4281			FALSE	0.046	322.000	0.000	NA		NA
3662029	3662030	YPE_4281	YPE_4282			TRUE	0.957	5.000	0.143	NA		NA
3662030	3662031	YPE_4282	YPE_4283			TRUE	0.723	60.000	0.143	NA		NA
3662031	3662032	YPE_4283	YPE_4284			TRUE	0.973	3.000	0.167	NA		NA
3662033	3662034	YPE_4285	YPE_4286			TRUE	0.998	0.000	0.222	0.069	Y	NA
3662034	3662035	YPE_4286	YPE_4287			TRUE	0.934	-63.000	0.068	1.000		NA
3662035	3662036	YPE_4287	YPE_4288			TRUE	0.918	-7.000	0.000	NA		NA
3662036	3662037	YPE_4288	YPE_4289			TRUE	0.934	-3.000	0.000	NA		NA
3662037	3662038	YPE_4289	YPE_4290			TRUE	0.823	10.000	0.000	NA		NA
3662038	3662039	YPE_4290	YPE_4291			TRUE	0.830	196.000	0.667	NA		NA
3662039	3662040	YPE_4291	YPE_4292			TRUE	0.996	3.000	0.667	1.000		NA
3662040	3662041	YPE_4292	YPE_4293			TRUE	0.968	19.000	0.375	NA		NA
3662041	3662042	YPE_4293	YPE_4294			TRUE	0.940	23.000	0.250	NA		NA
3662042	3662043	YPE_4294	YPE_4295			TRUE	0.816	27.000	0.100	NA		NA
3662043	3662044	YPE_4295	YPE_4296			TRUE	0.537	75.000	0.100	NA		NA
3662044	3662045	YPE_4296	YPE_4297			TRUE	0.967	44.000	0.667	NA		NA
3662045	3662046	YPE_4297	YPE_4298			TRUE	0.998	0.000	1.000	NA		NA
3662046	3662047	YPE_4298	YPE_4299			TRUE	0.996	-16.000	0.667	NA		NA
3662047	3662048	YPE_4299	YPE_4300			TRUE	0.996	-9.000	0.667	NA		NA
3662048	3662049	YPE_4300	YPE_4301			TRUE	0.996	2.000	0.667	NA		NA
3662049	3662050	YPE_4301	YPE_4302			TRUE	0.831	75.000	0.333	NA		NA
3662050	3662051	YPE_4302	YPE_4303			TRUE	0.432	60.000	0.000	NA		NA
3662051	3662052	YPE_4303	YPE_4304			FALSE	0.317	81.000	0.000	NA		NA
3662052	3662053	YPE_4304	YPE_4305			TRUE	0.994	8.000	0.750	NA		NA
3662053	3662054	YPE_4305	YPE_4306			TRUE	0.538	42.000	0.000	NA		NA
3662054	3662055	YPE_4306	YPE_4307			TRUE	0.451	57.000	0.000	NA		NA
3662055	3662056	YPE_4307	YPE_4308			TRUE	0.994	-7.000	0.444	NA		NA
3662056	3662057	YPE_4308	YPE_4309			TRUE	0.997	-12.000	0.800	NA		NA
3662057	3662058	YPE_4309	YPE_4310			TRUE	0.968	16.000	0.333	NA		NA
3662058	3662059	YPE_4310	YPE_4311			TRUE	0.734	18.000	0.000	NA		NA
3662059	3662060	YPE_4311	YPE_4312			FALSE	0.317	81.000	0.000	NA		NA
3662060	3662061	YPE_4312	YPE_4313			TRUE	0.934	-3.000	0.000	NA		NA
3662061	3662062	YPE_4313	YPE_4314			FALSE	0.294	93.000	0.000	NA		NA
3662063	3662064	YPE_4315	YPE_4316			TRUE	0.990	-3.000	0.000	1.000	Y	NA
3662064	3662065	YPE_4316	YPE_4317			FALSE	0.013	3308.000	0.000	1.000		NA
3662065	3662066	YPE_4317	YPE_4318			TRUE	0.912	97.000	0.667	NA		NA
3662066	3662067	YPE_4318	YPE_4319			TRUE	0.903	110.000	0.667	NA		NA
3662069	3662070	YPE_4321	YPE_4322		caf1	FALSE	0.016	685.000	0.000	NA		NA
3662070	3662071	YPE_4322	YPE_4323	caf1	caf1A	TRUE	0.960	81.000	1.000	NA		NA
3662071	3662072	YPE_4323	YPE_4324	caf1A	caf1M	TRUE	0.995	25.000	0.667	1.000	Y	NA
3662073	3662074	YPE_4325	YPE_4326	caf1R		FALSE	0.051	349.000	0.000	0.068	N	NA
3662074	3662075	YPE_4326	YPE_4327			FALSE	0.222	469.000	0.000	0.022	Y	NA
3662076	3662077	YPE_4329	YPE_4330			FALSE	0.195	174.000	0.000	NA		NA
3662077	3662078	YPE_4330	YPE_4331			TRUE	0.993	-85.000	0.500	NA		NA
3662080	3662081	YPE_4333	YPE_4334	ymt		FALSE	0.210	243.000	0.000	0.014		NA
3662083	3662084	YPE_4336	YPE_4337			TRUE	0.711	21.000	0.000	NA		NA
3662084	3662085	YPE_4337	YPE_4338			FALSE	0.151	200.000	0.000	NA		NA
3662085	3662086	YPE_4338	YPE_4339			TRUE	0.990	0.000	0.300	NA		NA
3661987	3661988	YPE_4340	YPE_4240	parA	parB	TRUE	0.994	3.000	0.667	1.000	N	NA