MicrobesOnline Operon Predictions for Mycobacterium bovis BCG str. Pasteur 1173P2

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column	Description
Gene1	VIMSS id of 1st gene in pair
SysName1	Systematic name of 1st gene in pair
Name1	Ordinary name of 1st gene in pair
Gene2	VIMSS id of 2nd gene in pair
SysName2	Systematic name of 2nd gene in pair
Name2	Ordinary name of 2nd gene in pair
bOp	Whether the pair is predicted to lie in the same operon or not
pOp	Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep	Distance between the two genes, in base pairs
MOGScore	Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore	Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim	Whether the genes share a COG category or not
ExprSim	Correlation of expression patterns (not available for most genomes)

Gene1	Gene2	SysName1	SysName2	Name1	Name2	bOp	pOp	Sep	MOGScore	GOScore	COGSim	ExprSim
2098268	2098269	BCG_0001	BCG_0002	dnaA_1	dnaN_1	FALSE	0.074	528.000	0.328	1.000	Y	NA
2098269	2098270	BCG_0002	BCG_0003	dnaN_1	recF_1	TRUE	0.927	20.000	0.318	1.000	Y	NA
2098270	2098271	BCG_0003	BCG_0004	recF_1		TRUE	0.952	-3.000	0.099	NA		NA
2098271	2098272	BCG_0004	BCG_0005		gyrB_1	FALSE	0.117	126.000	0.022	NA		NA
2098272	2098273	BCG_0005	BCG_0006	gyrB_1	gyrA_1	TRUE	0.954	35.000	0.306	0.002	Y	NA
2098273	2098274	BCG_0006	BCG_0007	gyrA_1		FALSE	0.174	96.000	0.009	NA		NA
2098274	2098275	BCG_0007	ileT_1		tRNA-Ile	FALSE	0.139	59.000	0.000	NA		NA
2098275	2098276	ileT_1	alaT_1	tRNA-Ile	tRNA-Ala	FALSE	0.038	152.000	0.000	NA		NA
2098279	2098280	BCG_0010c	BCG_0011c			FALSE	0.121	156.000	0.181	NA		NA
2098281	2098282	BCG_0012	BCG_0013		trpG_1	FALSE	0.371	37.000	0.098	NA		NA
2098284	2098285	BCG_0015	BCG_0016		sigMa_2	FALSE	0.178	35.000	0.000	NA		NA
2098285	2098286	BCG_0016	BCG_0017	sigMa_2	sigMb_2	FALSE	0.217	-111.000	0.000	NA		NA
2098286	2098287	BCG_0017	BCG_0018	sigMb_2		FALSE	0.340	16.000	0.000	NA		NA
2098287	2098288	BCG_0018	BCG_0019		trxB2_2	FALSE	0.189	94.000	0.015	NA		NA
2098288	2098289	BCG_0019	BCG_0020	trxB2_2	trxC_2	TRUE	0.991	-3.000	0.025	1.000	Y	NA
2098289	2098290	BCG_0020	BCG_0021	trxC_2		FALSE	0.276	110.000	0.237	1.000	N	NA
2098291	2098292	BCG_0022c	BCG_0023c		parB_2	FALSE	0.011	290.000	0.013	NA		NA
2098292	2098293	BCG_0023c	BCG_0024c	parB_2	parA_2	TRUE	0.993	-3.000	0.827	1.000	N	NA
2098293	2098294	BCG_0024c	BCG_0025c	parA_2	gid_2	TRUE	0.978	-3.000	0.339	1.000	N	NA
2098294	2098295	BCG_0025c	BCG_0026c	gid_2		FALSE	0.180	132.000	0.070	1.000		NA
2098295	2098296	BCG_0026c	BCG_0027c			FALSE	0.290	72.000	0.024	1.000		NA
2098296	2098297	BCG_0027c	BCG_0028c			FALSE	0.468	-16.000	0.010	NA		NA
2098297	2098298	BCG_0028c	BCG_0029c		rnpA_2	TRUE	0.989	-3.000	0.540	NA		NA
2098298	2098299	BCG_0029c	BCG_0030c	rnpA_2	rpmH_2	TRUE	0.994	-3.000	0.787	1.000		NA
2098300	2098301	BCG_0031	BCG_0032	dnaA_2	dnaN_2	FALSE	0.074	528.000	0.328	1.000	Y	NA
2098301	2098302	BCG_0032	BCG_0033	dnaN_2	recF_2	TRUE	0.927	20.000	0.318	1.000	Y	NA
2098302	2098303	BCG_0033	BCG_0034	recF_2		TRUE	0.952	-3.000	0.099	NA		NA
2098303	2098304	BCG_0034	BCG_0035		gyrB_2	FALSE	0.117	126.000	0.022	NA		NA
2098304	2098305	BCG_0035	BCG_0036	gyrB_2	gyrA_2	TRUE	0.954	35.000	0.306	0.002	Y	NA
2098305	2098306	BCG_0036	BCG_0037	gyrA_2		FALSE	0.174	96.000	0.009	NA		NA
2098306	2098307	BCG_0037	ileT_2		tRNA-Ile	FALSE	0.139	59.000	0.000	NA		NA
2098307	2098308	ileT_2	alaT_2	tRNA-Ile	tRNA-Ala	FALSE	0.038	152.000	0.000	NA		NA
2098311	2098312	BCG_0040c	BCG_0041c			FALSE	0.121	156.000	0.181	NA		NA
2098313	2098314	BCG_0042	BCG_0043		trpG_2	FALSE	0.371	37.000	0.098	NA		NA
2098315	2098316	BCG_0044c	BCG_0045c	pknB	pknA	TRUE	0.999	-3.000	0.426	0.005	Y	NA
2098316	2098317	BCG_0045c	BCG_0046c	pknA	pbpA	TRUE	0.988	-3.000	0.574	1.000	N	NA
2098317	2098318	BCG_0046c	BCG_0047c	pbpA	rodA	TRUE	0.968	-3.000	0.250	1.000	N	NA
2098318	2098319	BCG_0047c	BCG_0048c	rodA	pstP	TRUE	0.948	-3.000	0.145	1.000	N	NA
2098319	2098320	BCG_0048c	BCG_0049c	pstP		TRUE	0.735	89.000	0.216	NA	Y	NA
2098320	2098321	BCG_0049c	BCG_0050c		TB39.8	FALSE	0.157	124.000	0.069	NA		NA
2098323	2098324	BCG_0051c	BCG_0052c		whiB5	FALSE	0.077	142.000	0.000	1.000		NA
2098325	2098326	BCG_0053	BCG_0054			TRUE	0.990	-3.000	0.600	NA		NA
2098326	2098327	BCG_0054	BCG_0055			FALSE	0.192	-258.000	0.000	NA		NA
2098327	2098328	BCG_0055	BCG_0056			FALSE	0.170	38.000	0.000	NA		NA
2098328	2098329	BCG_0056	BCG_0057			TRUE	0.686	115.000	1.000	NA		NA
2098329	2098330	BCG_0057	BCG_0058			TRUE	0.736	38.000	0.600	NA		NA
2098330	2098331	BCG_0058	BCG_0059			TRUE	0.966	8.000	0.800	NA		NA
2098331	2098332	BCG_0059	BCG_0060			FALSE	0.011	238.000	0.000	NA		NA
2098332	2098333	BCG_0060	BCG_0061			TRUE	0.794	70.000	1.000	NA		NA
2098333	2098334	BCG_0061	BCG_0062			FALSE	0.203	29.000	0.000	NA		NA
2098334	2098335	BCG_0062	BCG_0063		bioF2	FALSE	0.003	501.000	0.000	NA		NA
2098335	2098336	BCG_0063	BCG_0064	bioF2	acpA	TRUE	0.793	-3.000	0.000	1.000	N	NA
2098336	2098337	BCG_0064	BCG_0065	acpA		TRUE	0.876	-3.000	0.000	NA		NA
2098337	2098338	BCG_0065	BCG_0066		fadD34	TRUE	0.876	-3.000	0.000	NA		NA
2098339	2098340	BCG_0067c	BCG_0068c			FALSE	0.391	48.000	0.174	NA		NA
2098342	2098343	BCG_0070c	BCG_0071c		mtc28	TRUE	0.761	82.000	0.875	NA		NA
2098345	2098346	BCG_0073c	BCG_0074c			FALSE	0.504	159.000	0.000	0.035	Y	NA
2098346	2098347	BCG_0074c	BCG_0075c			FALSE	0.272	133.000	0.412	NA	N	NA
2098347	2098348	BCG_0075c	BCG_0076c			TRUE	0.712	16.000	0.235	NA		NA
2098348	2098349	BCG_0076c	BCG_0077c		ino1	FALSE	0.315	82.000	0.059	1.000		NA
2098349	2098350	BCG_0077c	BCG_0078c	ino1		TRUE	0.618	61.000	0.608	NA	N	NA
2098350	2098351	BCG_0078c	BCG_0079c			FALSE	0.267	101.000	0.122	NA		NA
2098352	2098353	BCG_0080	BCG_0081		ponA1	FALSE	0.013	419.000	0.200	NA		NA
2098353	2098354	BCG_0081	BCG_0082	ponA1		TRUE	0.967	-3.000	0.204	NA		NA
2098354	2098355	BCG_0082	BCG_0083			FALSE	0.360	32.000	0.061	NA		NA
2098355	2098356	BCG_0083	BCG_0084		rpsF	FALSE	0.020	219.000	0.002	NA		NA
2098356	2098357	BCG_0084	BCG_0085	rpsF	ssb	FALSE	0.141	104.000	0.029	1.000	N	NA
2098357	2098358	BCG_0085	BCG_0086	ssb	rpsR1	FALSE	0.216	42.000	0.030	1.000	N	NA
2098358	2098359	BCG_0086	BCG_0087	rpsR1	rplI	TRUE	0.959	33.000	0.499	0.020	Y	NA
2098359	2098360	BCG_0087	BCG_0088	rplI		FALSE	0.203	29.000	0.000	NA		NA
2098360	2098361	BCG_0088	BCG_0089		dnaB	FALSE	0.315	-21.000	0.000	NA		NA
2098361	2098362	BCG_0089	BCG_0090	dnaB		FALSE	0.024	180.000	0.000	NA		NA
2098362	2098363	BCG_0090	BCG_0091			TRUE	0.756	17.000	0.317	NA		NA
2098363	2098364	BCG_0091	BCG_0092			FALSE	0.243	24.000	0.000	NA		NA
2098364	2098365	BCG_0092	BCG_0093		celA1	FALSE	0.053	136.000	0.000	NA		NA
2098365	2098366	BCG_0093	BCG_0094	celA1		FALSE	0.007	229.000	0.000	1.000	N	NA
2098366	2098367	BCG_0094	BCG_0095			FALSE	0.015	258.000	0.000	1.000		NA
2098367	2098368	BCG_0095	BCG_0095A			FALSE	0.206	67.000	0.000	1.000		NA
2098368	2098369	BCG_0095A	BCG_0096			FALSE	0.490	-7.000	0.000	NA		NA
2098370	2098371	BCG_0097c	BCG_0098c	icd2		FALSE	0.042	118.000	0.000	1.000	N	NA
2098373	2098374	BCG_0100c	BCG_0101c	sdaA	glyA2	TRUE	0.993	-3.000	0.118	1.000	Y	NA
2098375	2098376	BCG_0102	BCG_0103			FALSE	0.002	431.000	0.000	1.000	N	NA
2098376	2098377	BCG_0103	BCG_0104			TRUE	0.986	3.000	1.000	1.000	N	NA
2098377	2098378	BCG_0104	BCG_0105			FALSE	0.072	80.000	0.000	1.000	N	NA
2098378	2098379	BCG_0105	BCG_0106			FALSE	0.265	13.000	0.000	1.000	N	NA
2098380	2098381	BCG_0107c	BCG_0108c			FALSE	0.134	64.000	0.000	NA		NA
2098383	2098384	BCG_0110c	BCG_0111c			TRUE	0.876	-3.000	0.000	NA		NA
2098385	2098386	BCG_0112	BCG_0113			TRUE	0.876	-3.000	0.000	NA		NA
2098386	2098387	BCG_0113	BCG_0114			FALSE	0.183	95.000	0.000	1.000		NA
2098387	2098388	BCG_0114	BCG_0115			TRUE	0.777	5.000	0.043	1.000	N	NA
2098388	2098389	BCG_0115	BCG_0116			TRUE	0.997	-3.000	0.085	0.007	Y	NA
2098389	2098390	BCG_0116	BCG_0117		hycD	TRUE	0.995	0.000	0.398	1.000	Y	NA
2098390	2098391	BCG_0117	BCG_0118	hycD	hycP	TRUE	0.982	11.000	0.679	NA	Y	NA
2098391	2098392	BCG_0118	BCG_0119	hycP	hycQ	TRUE	0.997	0.000	0.864	NA	Y	NA
2098392	2098393	BCG_0119	BCG_0120	hycQ	hycE	TRUE	0.999	-3.000	0.659	0.007	Y	NA
2098393	2098394	BCG_0120	BCG_0121	hycE		FALSE	0.178	35.000	0.000	NA		NA
2098394	2098395	BCG_0121	BCG_0122			FALSE	0.035	157.000	0.000	NA		NA
2098395	2098396	BCG_0122	BCG_0123			FALSE	0.063	129.000	0.000	NA		NA
2098396	2098397	BCG_0123	BCG_0124		mtn	FALSE	0.003	434.000	0.000	NA		NA
2098397	2098398	BCG_0124	BCG_0125	mtn	ctpA	FALSE	0.033	132.000	0.000	1.000	N	NA
2098399	2098400	BCG_0126c	BCG_0127c			FALSE	0.152	47.000	0.000	NA		NA
2098400	2098401	BCG_0127c	BCG_0128c			FALSE	0.198	-229.000	0.000	NA		NA
2098402	2098403	BCG_0129	BCG_0130	PPE1		FALSE	0.439	19.000	0.167	NA	N	NA
2098403	2098404	BCG_0130	BCG_0131			TRUE	0.988	-3.000	0.500	NA		NA
2098404	2098405	BCG_0131	BCG_0132		fadD10	TRUE	0.956	5.000	0.444	NA		NA
2098405	2098406	BCG_0132	BCG_0133	fadD10		TRUE	0.981	5.000	0.800	1.000		NA
2098406	2098407	BCG_0133	BCG_0134		nrp	TRUE	0.930	-18.000	0.364	0.012		NA
2098407	2098408	BCG_0134	BCG_0135	nrp		FALSE	0.026	175.000	0.000	NA		NA
2098413	2098414	BCG_0140c	BCG_0141c	ctpI		FALSE	0.004	354.000	0.000	NA		NA
2098415	2098416	BCG_0142	BCG_0143	PE_PGRS1		FALSE	0.105	148.000	0.091	NA		NA
2098416	2098417	BCG_0143	BCG_0144			FALSE	0.040	181.000	0.000	1.000		NA
2098417	2098418	BCG_0144	BCG_0145		gca	FALSE	0.004	282.000	0.000	1.000	N	NA
2098418	2098419	BCG_0145	BCG_0146	gca	gmhA	FALSE	0.074	74.000	0.000	1.000	N	NA
2098419	2098420	BCG_0146	BCG_0147	gmhA		FALSE	0.111	32.000	0.000	1.000	N	NA
2098420	2098421	BCG_0147	BCG_0149			TRUE	0.898	0.000	0.000	1.000		NA
2098426	2098427	BCG_0154c	BCG_0155c	fusA2b		FALSE	0.120	136.000	0.009	1.000		NA
2098428	2098429	BCG_0156	BCG_0157			TRUE	0.876	-3.000	0.000	NA		NA
2098429	2098430	BCG_0157	BCG_0158		PE_PGRS2	FALSE	0.006	309.000	0.000	NA		NA
2098430	2098431	BCG_0158	BCG_0159	PE_PGRS2	pepA	FALSE	0.038	152.000	0.000	NA		NA
2098431	2098432	BCG_0159	BCG_0160	pepA	treS	FALSE	0.105	109.000	0.013	1.000	N	NA
2098432	2098433	BCG_0160	BCG_0161	treS		TRUE	0.641	103.000	0.071	NA	Y	NA
2098433	2098434	BCG_0161	BCG_0162			FALSE	0.320	68.000	0.136	NA		NA
2098437	2098438	BCG_0165c	BCG_0166c	fadE1	fgd2	FALSE	0.425	42.000	0.286	NA	N	NA
2098439	2098440	BCG_0167	BCG_0168			FALSE	0.003	420.000	0.000	NA		NA
2098440	2098441	BCG_0168	BCG_0169			TRUE	0.837	0.000	0.000	NA		NA
2098441	2098442	BCG_0169	BCG_0170			TRUE	0.778	2.000	0.000	NA		NA
2098446	2098447	BCG_0174	BCG_0175			TRUE	0.979	1.000	0.538	NA		NA
2098447	2098448	BCG_0175	BCG_0176			FALSE	0.244	61.000	0.034	NA		NA
2098452	2098453	BCG_0180	BCG_0181			FALSE	0.555	89.000	0.571	NA	N	NA
2098453	2098454	BCG_0181	BCG_0182			TRUE	0.896	43.000	0.556	NA	Y	NA
2098454	2098455	BCG_0182	BCG_0183			FALSE	0.473	95.000	0.444	NA	N	NA
2098455	2098456	BCG_0183	BCG_0184			TRUE	0.750	75.000	0.875	1.000	N	NA
2098456	2098457	BCG_0184	BCG_0185			TRUE	0.960	7.000	0.700	1.000	N	NA
2098458	2098459	BCG_0186c	BCG_0187c		PE1	FALSE	0.002	591.000	0.000	NA		NA
2098459	2098460	BCG_0187c	BCG_0188c	PE1	PE2	FALSE	0.535	10.000	0.000	NA		NA
2098460	2098461	BCG_0188c	BCG_0189c	PE2	ptbB	FALSE	0.009	259.000	0.000	NA		NA
2098461	2098462	BCG_0189c	BCG_0190c	ptbB	fadE2	TRUE	0.931	2.000	0.226	1.000	N	NA
2098463	2098464	BCG_0191	BCG_0192	pntAa	pntAb	TRUE	0.997	1.000	0.829	0.001		NA
2098464	2098465	BCG_0192	BCG_0193	pntAb	pntB	TRUE	0.996	-3.000	0.321	0.001		NA
2098465	2098466	BCG_0193	BCG_0194	pntB		FALSE	0.003	306.000	0.000	1.000	N	NA
2098467	2098468	BCG_0195c	BCG_0196c	PE3	PE4	FALSE	0.117	92.000	0.000	NA		NA
2098471	2098472	BCG_0199	BCG_0200		TB18.5	FALSE	0.235	54.000	0.020	NA		NA
2098474	2098475	BCG_0203	BCG_0204	fadD5	yrbE1A	FALSE	0.153	204.000	0.000	NA	Y	NA
2098475	2098476	BCG_0204	BCG_0205	yrbE1A	yrbE1B	TRUE	0.997	2.000	1.000	NA	Y	NA
2098476	2098477	BCG_0205	BCG_0206	yrbE1B	mce1A	TRUE	0.995	5.000	1.000	NA	Y	NA
2098477	2098478	BCG_0206	BCG_0207	mce1A	mce1B	TRUE	0.999	-3.000	0.500	0.008	Y	NA
2098478	2098479	BCG_0207	BCG_0208	mce1B	mce1C	TRUE	0.999	-3.000	1.000	0.008	Y	NA
2098479	2098480	BCG_0208	BCG_0209	mce1C	mce1D	TRUE	0.999	-3.000	1.000	0.008	Y	NA
2098480	2098481	BCG_0209	BCG_0210	mce1D	lprK	TRUE	0.999	-3.000	0.500	0.008	Y	NA
2098481	2098482	BCG_0210	BCG_0211	lprK	mce1F	TRUE	0.996	-6.000	0.800	0.008	Y	NA
2098482	2098483	BCG_0211	BCG_0212	mce1F		FALSE	0.558	36.000	0.286	NA		NA
2098483	2098484	BCG_0212	BCG_0213			TRUE	0.992	-3.000	0.750	NA		NA
2098484	2098485	BCG_0213	BCG_0214			TRUE	0.995	-3.000	1.000	NA		NA
2098485	2098486	BCG_0214	BCG_0215			TRUE	0.896	-33.000	1.000	NA		NA
2098487	2098488	BCG_0216c	BCG_0217c	lprO		FALSE	0.504	80.000	0.333	NA		NA
2098488	2098489	BCG_0217c	BCG_0218c			FALSE	0.213	27.000	0.000	NA		NA
2098489	2098490	BCG_0218c	BCG_0219c		sigG	FALSE	0.317	17.000	0.000	NA		NA
2098491	2098492	BCG_0220	BCG_0221			FALSE	0.327	42.000	0.068	NA		NA
2098492	2098493	BCG_0221	BCG_0222			TRUE	0.990	-3.000	0.600	NA		NA
2098493	2098494	BCG_0222	BCG_0223		bglS	FALSE	0.562	45.000	0.273	1.000		NA
2098494	2098495	BCG_0223	BCG_0224	bglS		FALSE	0.007	361.000	0.000	1.000		NA
2098495	2098496	BCG_0224	BCG_0225			FALSE	0.073	119.000	0.000	NA		NA
2098498	2098499	BCG_0227	BCG_0228			FALSE	0.173	128.000	0.125	NA		NA
2098499	2098500	BCG_0228	BCG_0229			FALSE	0.542	77.000	0.375	NA		NA
2098502	2098503	BCG_0231	BCG_0232			FALSE	0.002	438.000	0.000	1.000	N	NA
2098503	2098504	BCG_0232	BCG_0233			FALSE	0.368	113.000	0.000	0.060		NA
2098504	2098505	BCG_0233	BCG_0234			TRUE	0.973	0.000	0.276	1.000		NA
2098507	2098508	BCG_0236	BCG_0237			TRUE	0.995	-3.000	1.000	NA		NA
2098509	2098510	BCG_0238c	BCG_0239c		mmpL11	TRUE	0.994	-3.000	0.750	1.000		NA
2098514	2098515	BCG_0243c	BCG_0244c	mmpL3		FALSE	0.402	66.000	0.217	NA		NA
2098515	2098516	BCG_0244c	BCG_0245c			TRUE	0.865	3.000	0.040	NA		NA
2098517	2098518	BCG_0246	BCG_0247			TRUE	0.988	-3.000	0.529	NA		NA
2098518	2098519	BCG_0247	BCG_0248		pckA	FALSE	0.043	184.000	0.026	NA		NA
2098520	2098521	BCG_0249c	BCG_0250c	nadR		TRUE	0.793	-3.000	0.000	1.000	N	NA
2098526	2098527	BCG_0255	BCG_0256			TRUE	0.951	2.000	0.273	NA		NA
2098527	2098528	BCG_0256	BCG_0257		lipC	TRUE	0.812	10.000	0.182	NA		NA
2098528	2098529	BCG_0257	BCG_0258	lipC		TRUE	0.940	14.000	1.000	NA		NA
2098530	2098531	BCG_0259c	BCG_0260c			TRUE	0.979	-3.000	0.000	0.063		NA
2098531	2098532	BCG_0260c	BCG_0261c			FALSE	0.326	99.000	0.104	1.000		NA
2098534	2098535	BCG_0263c	BCG_0264c			TRUE	0.863	10.000	0.265	NA		NA
2098537	2098538	BCG_0266c	BCG_0267c		php	TRUE	0.876	-3.000	0.000	NA		NA
2098539	2098540	BCG_0268	BCG_0269	fadE4		FALSE	0.198	135.000	0.250	1.000	N	NA
2098540	2098541	BCG_0269	BCG_0270		nrdB	TRUE	0.979	-3.000	0.357	1.000	N	NA
2098542	2098543	BCG_0271c	BCG_0272c	gabD1		FALSE	0.222	26.000	0.000	NA		NA
2098543	2098544	BCG_0272c	BCG_0273c			FALSE	0.331	35.000	0.053	NA		NA
2098544	2098545	BCG_0273c	BCG_0274c			TRUE	0.683	47.000	0.526	NA		NA
2098546	2098547	BCG_0275	BCG_0276	lpqI		FALSE	0.311	76.000	0.185	1.000	N	NA
2098547	2098548	BCG_0276	BCG_0277			FALSE	0.135	62.000	0.000	NA		NA
2098548	2098549	BCG_0277	BCG_0278			TRUE	0.590	8.000	0.000	NA		NA
2098550	2098551	BCG_0279c	BCG_0280c		fabG4	TRUE	0.974	11.000	0.412	1.000	Y	NA
2098554	2098555	BCG_0283	BCG_0284			FALSE	0.005	316.000	0.000	NA		NA
2098556	2098557	BCG_0285c	BCG_0286c			TRUE	0.999	1.000	0.826	0.004	Y	NA
2098557	2098558	BCG_0286c	BCG_0287c			TRUE	0.843	31.000	0.860	NA		NA
2098558	2098559	BCG_0287c	BCG_0288c			FALSE	0.339	80.000	0.171	NA		NA
2098559	2098560	BCG_0288c	BCG_0289c		hsp	FALSE	0.112	145.000	0.091	NA		NA
2098561	2098562	BCG_0290	BCG_0291	nirB	nirD	TRUE	0.865	26.000	0.286	0.001	N	NA
2098563	2098564	BCG_0292c	BCG_0293c	cobU	cobQ1	TRUE	0.831	25.000	0.031	1.000	Y	NA
2098564	2098565	BCG_0293c	BCG_0294c	cobQ1	PPE2	FALSE	0.028	19.000	0.000	NA	N	NA
2098567	2098568	BCG_0296c	BCG_0297c			FALSE	0.517	25.000	0.071	1.000		NA
2098568	2098569	BCG_0297c	BCG_0298c			TRUE	0.971	-3.000	0.173	1.000		NA
2098569	2098570	BCG_0298c	BCG_0299c		narK3	FALSE	0.009	100.000	0.000	NA	N	NA
2098570	2098571	BCG_0299c	BCG_0300c	narK3	aac	FALSE	0.047	141.000	0.000	NA		NA
2098571	2098572	BCG_0300c	BCG_0301c	aac		TRUE	0.766	10.000	0.101	NA		NA
2098572	2098573	BCG_0301c	BCG_0302c			TRUE	0.955	17.000	0.551	NA	Y	NA
2098573	2098574	BCG_0302c	BCG_0303c			FALSE	0.178	96.000	0.050	1.000	N	NA
2098574	2098575	BCG_0303c	BCG_0304c		oplA	FALSE	0.160	22.000	0.000	1.000	N	NA
2098577	2098578	BCG_0306c	BCG_0307c			FALSE	0.011	65.000	0.000	NA	N	NA
2098580	2098581	BCG_0309c	BCG_0310c	fadE6		FALSE	0.080	114.000	0.000	NA		NA
2098581	2098582	BCG_0310c	BCG_0311c			TRUE	0.994	-3.000	0.833	NA		NA
2098586	2098587	BCG_0315c	BCG_0315A			FALSE	0.243	24.000	0.000	NA		NA
2098587	2098588	BCG_0315A	BCG_0316c		PE_PGRS3b	FALSE	0.280	20.000	0.000	NA		NA
2098588	2098589	BCG_0316c	BCG_0317c	PE_PGRS3b	PE_PGRS3a	FALSE	0.207	-177.000	0.000	NA		NA
2098589	2098590	BCG_0317c	BCG_0318c	PE_PGRS3a	PE_PGRS3	FALSE	0.009	264.000	0.000	NA		NA
11402759	2098586		BCG_0315c			FALSE	NA	406.000	0.000	NA		NA
11545122	2098586		BCG_0315c			FALSE	NA	406.000	0.000	NA		NA
11687514	2098586		BCG_0315c			FALSE	NA	406.000	0.000	NA		NA
11402760	2098586		BCG_0315c			FALSE	NA	427.000	0.000	NA		NA
11545123	2098586		BCG_0315c			FALSE	NA	427.000	0.000	NA		NA
11687515	2098586		BCG_0315c			FALSE	NA	427.000	0.000	NA		NA
11402761	2098586		BCG_0315c			FALSE	NA	454.000	0.000	NA		NA
11545124	2098586		BCG_0315c			FALSE	NA	454.000	0.000	NA		NA
11687516	2098586		BCG_0315c			FALSE	NA	454.000	0.000	NA		NA
11402762	2098586		BCG_0315c			FALSE	NA	475.000	0.000	NA		NA
11545125	2098586		BCG_0315c			FALSE	NA	475.000	0.000	NA		NA
11687517	2098586		BCG_0315c			FALSE	NA	475.000	0.000	NA		NA
11402763	2098586		BCG_0315c			FALSE	NA	529.000	0.000	NA		NA
11545126	2098586		BCG_0315c			FALSE	NA	529.000	0.000	NA		NA
11687518	2098586		BCG_0315c			FALSE	NA	529.000	0.000	NA		NA
11402764	2098586		BCG_0315c			FALSE	NA	550.000	0.000	NA		NA
11545127	2098586		BCG_0315c			FALSE	NA	550.000	0.000	NA		NA
11687519	2098586		BCG_0315c			FALSE	NA	550.000	0.000	NA		NA
11402765	2098586		BCG_0315c			FALSE	NA	583.000	0.000	NA		NA
11545128	2098586		BCG_0315c			FALSE	NA	583.000	0.000	NA		NA
11687520	2098586		BCG_0315c			FALSE	NA	583.000	0.000	NA		NA
11402766	2098586		BCG_0315c			FALSE	NA	604.000	0.000	NA		NA
11545129	2098586		BCG_0315c			FALSE	NA	604.000	0.000	NA		NA
11687521	2098586		BCG_0315c			FALSE	NA	604.000	0.000	NA		NA
11402767	2098586		BCG_0315c			FALSE	NA	628.000	0.000	NA		NA
11545130	2098586		BCG_0315c			FALSE	NA	628.000	0.000	NA		NA
11687522	2098586		BCG_0315c			FALSE	NA	628.000	0.000	NA		NA
11402768	2098586		BCG_0315c			FALSE	NA	649.000	0.000	NA		NA
11545131	2098586		BCG_0315c			FALSE	NA	649.000	0.000	NA		NA
11687523	2098586		BCG_0315c			FALSE	NA	649.000	0.000	NA		NA
11402769	2098586		BCG_0315c			FALSE	NA	676.000	0.000	NA		NA
11545132	2098586		BCG_0315c			FALSE	NA	676.000	0.000	NA		NA
11687524	2098586		BCG_0315c			FALSE	NA	676.000	0.000	NA		NA
11402770	2098586		BCG_0315c			FALSE	NA	697.000	0.000	NA		NA
11545133	2098586		BCG_0315c			FALSE	NA	697.000	0.000	NA		NA
11687525	2098586		BCG_0315c			FALSE	NA	697.000	0.000	NA		NA
11402771	2098586		BCG_0315c			FALSE	NA	733.000	0.000	NA		NA
11545134	2098586		BCG_0315c			FALSE	NA	733.000	0.000	NA		NA
11687526	2098586		BCG_0315c			FALSE	NA	733.000	0.000	NA		NA
11402772	2098586		BCG_0315c			FALSE	NA	754.000	0.000	NA		NA
11545135	2098586		BCG_0315c			FALSE	NA	754.000	0.000	NA		NA
11687527	2098586		BCG_0315c			FALSE	NA	754.000	0.000	NA		NA
11402773	2098586		BCG_0315c			FALSE	NA	781.000	0.000	NA		NA
11545136	2098586		BCG_0315c			FALSE	NA	781.000	0.000	NA		NA
11687528	2098586		BCG_0315c			FALSE	NA	781.000	0.000	NA		NA
11402774	2098586		BCG_0315c			FALSE	NA	802.000	0.000	NA		NA
11545137	2098586		BCG_0315c			FALSE	NA	802.000	0.000	NA		NA
11687529	2098586		BCG_0315c			FALSE	NA	802.000	0.000	NA		NA
11402775	2098586		BCG_0315c			FALSE	NA	829.000	0.000	NA		NA
11545138	2098586		BCG_0315c			FALSE	NA	829.000	0.000	NA		NA
11687530	2098586		BCG_0315c			FALSE	NA	829.000	0.000	NA		NA
11402776	2098586		BCG_0315c			FALSE	NA	850.000	0.000	NA		NA
11545139	2098586		BCG_0315c			FALSE	NA	850.000	0.000	NA		NA
11687531	2098586		BCG_0315c			FALSE	NA	850.000	0.000	NA		NA
11402777	2098586		BCG_0315c			FALSE	NA	874.000	0.000	NA		NA
11545140	2098586		BCG_0315c			FALSE	NA	874.000	0.000	NA		NA
11687532	2098586		BCG_0315c			FALSE	NA	874.000	0.000	NA		NA
11402778	2098586		BCG_0315c			FALSE	NA	895.000	0.000	NA		NA
11545141	2098586		BCG_0315c			FALSE	NA	895.000	0.000	NA		NA
11687533	2098586		BCG_0315c			FALSE	NA	895.000	0.000	NA		NA
11402779	2098586		BCG_0315c			FALSE	NA	928.000	0.000	NA		NA
11545142	2098586		BCG_0315c			FALSE	NA	928.000	0.000	NA		NA
11687534	2098586		BCG_0315c			FALSE	NA	928.000	0.000	NA		NA
11402780	2098586		BCG_0315c			FALSE	NA	949.000	0.000	NA		NA
11545143	2098586		BCG_0315c			FALSE	NA	949.000	0.000	NA		NA
11687535	2098586		BCG_0315c			FALSE	NA	949.000	0.000	NA		NA
11402781	2098586		BCG_0315c			FALSE	NA	1000.000	0.000	NA		NA
11545144	2098586		BCG_0315c			FALSE	NA	1000.000	0.000	NA		NA
11687536	2098586		BCG_0315c			FALSE	NA	1000.000	0.000	NA		NA
11402782	2098586		BCG_0315c			FALSE	NA	1021.000	0.000	NA		NA
11545145	2098586		BCG_0315c			FALSE	NA	1021.000	0.000	NA		NA
11687537	2098586		BCG_0315c			FALSE	NA	1021.000	0.000	NA		NA
11402783	2098586		BCG_0315c			FALSE	NA	1063.000	0.000	NA		NA
11545146	2098586		BCG_0315c			FALSE	NA	1063.000	0.000	NA		NA
11687538	2098586		BCG_0315c			FALSE	NA	1063.000	0.000	NA		NA
11402784	2098586		BCG_0315c			FALSE	NA	1084.000	0.000	NA		NA
11545147	2098586		BCG_0315c			FALSE	NA	1084.000	0.000	NA		NA
11687539	2098586		BCG_0315c			FALSE	NA	1084.000	0.000	NA		NA
11402785	2098586		BCG_0315c			FALSE	NA	1108.000	0.000	NA		NA
11545148	2098586		BCG_0315c			FALSE	NA	1108.000	0.000	NA		NA
11687540	2098586		BCG_0315c			FALSE	NA	1108.000	0.000	NA		NA
11402786	2098586		BCG_0315c			FALSE	NA	1129.000	0.000	NA		NA
11545149	2098586		BCG_0315c			FALSE	NA	1129.000	0.000	NA		NA
11687541	2098586		BCG_0315c			FALSE	NA	1129.000	0.000	NA		NA
11402787	2098586		BCG_0315c			FALSE	NA	1156.000	0.000	NA		NA
11545150	2098586		BCG_0315c			FALSE	NA	1156.000	0.000	NA		NA
11687542	2098586		BCG_0315c			FALSE	NA	1156.000	0.000	NA		NA
11402788	2098586		BCG_0315c			FALSE	NA	1177.000	0.000	NA		NA
11545151	2098586		BCG_0315c			FALSE	NA	1177.000	0.000	NA		NA
11687543	2098586		BCG_0315c			FALSE	NA	1177.000	0.000	NA		NA
11402789	2098586		BCG_0315c			FALSE	NA	1198.000	0.000	NA		NA
11545152	2098586		BCG_0315c			FALSE	NA	1198.000	0.000	NA		NA
11687544	2098586		BCG_0315c			FALSE	NA	1198.000	0.000	NA		NA
11402790	2098586		BCG_0315c			FALSE	NA	1219.000	0.000	NA		NA
11545153	2098586		BCG_0315c			FALSE	NA	1219.000	0.000	NA		NA
11687545	2098586		BCG_0315c			FALSE	NA	1219.000	0.000	NA		NA
11402791	2098586		BCG_0315c			FALSE	NA	1246.000	0.000	NA		NA
11545154	2098586		BCG_0315c			FALSE	NA	1246.000	0.000	NA		NA
11687546	2098586		BCG_0315c			FALSE	NA	1246.000	0.000	NA		NA
11402792	2098586		BCG_0315c			FALSE	NA	1267.000	0.000	NA		NA
11545155	2098586		BCG_0315c			FALSE	NA	1267.000	0.000	NA		NA
11687547	2098586		BCG_0315c			FALSE	NA	1267.000	0.000	NA		NA
11402793	2098586		BCG_0315c			FALSE	NA	1291.000	0.000	NA		NA
11545156	2098586		BCG_0315c			FALSE	NA	1291.000	0.000	NA		NA
11687548	2098586		BCG_0315c			FALSE	NA	1291.000	0.000	NA		NA
2098590	2098591	BCG_0318c	BCG_0319c	PE_PGRS3	PE_PGRS4	FALSE	0.010	250.000	0.000	NA		NA
2098592	2098593	BCG_0320	BCG_0321	PPE3		TRUE	0.789	24.000	0.667	NA	N	NA
2098593	2098594	BCG_0321	BCG_0322			FALSE	0.013	225.000	0.000	NA		NA
2098594	2098595	BCG_0322	BCG_0323			TRUE	0.995	-3.000	1.000	NA		NA
2098595	2098596	BCG_0323	BCG_0324			TRUE	0.992	-3.000	0.750	NA		NA
2098596	2098597	BCG_0324	BCG_0325		PE5	TRUE	0.981	-3.000	0.333	NA		NA
2098597	2098598	BCG_0325	BCG_0326	PE5	PPE4	TRUE	0.972	3.000	0.500	NA		NA
2098598	2098599	BCG_0326	BCG_0327	PPE4	esxG	FALSE	0.149	49.000	0.000	NA		NA
2098599	2098600	BCG_0327	BCG_0328	esxG	esxH	FALSE	0.198	30.000	0.000	NA		NA
2098600	2098601	BCG_0328	BCG_0329	esxH		FALSE	0.485	11.000	0.000	NA		NA
2098601	2098602	BCG_0329	BCG_0330			TRUE	0.790	47.000	0.818	NA		NA
2098602	2098603	BCG_0330	BCG_0331			TRUE	0.989	-3.000	0.556	NA		NA
2098603	2098604	BCG_0331	BCG_0332			TRUE	0.989	-3.000	0.556	NA		NA
2098607	2098608	BCG_0335c	BCG_0336c			TRUE	0.773	10.000	0.118	NA		NA
2098609	2098610	BCG_0337	BCG_0338	PE_PGRS5		FALSE	0.075	143.000	0.000	1.000		NA
2098610	2098611	BCG_0338	BCG_0339			TRUE	0.876	-3.000	0.000	NA		NA
2098611	2098612	BCG_0339	BCG_0340			FALSE	0.151	48.000	0.000	NA		NA
2098612	2098613	BCG_0340	BCG_0341			TRUE	0.986	-3.000	0.444	NA		NA
2098613	2098614	BCG_0341	BCG_0342			FALSE	0.051	137.000	0.000	NA		NA
2098614	2098615	BCG_0342	BCG_0343			TRUE	0.793	-3.000	0.000	1.000	N	NA
2098616	2098617	BCG_0344c	BCG_0345c	PPE5	PPE6	FALSE	0.327	144.000	0.000	NA	Y	NA
2098620	2098621	BCG_0348	BCG_0349			FALSE	0.230	102.000	0.067	NA		NA
2098623	2098624	BCG_0351	BCG_0352			FALSE	0.250	155.000	0.333	1.000		NA
2098624	2098625	BCG_0352	BCG_0353			FALSE	0.130	72.000	0.000	NA		NA
2098627	2098628	BCG_0355	BCG_0356			FALSE	0.467	49.000	0.286	1.000	N	NA
2098629	5582074	BCG_0357c	BCG_t02	glpQ2	tRNA-Gly	FALSE	0.009	261.000	0.000	NA		NA
5582074	2098631	BCG_t02	BCG_0358c	tRNA-Gly		FALSE	0.193	31.000	0.000	NA		NA
2098632	2098633	BCG_0359	BCG_0360	pcp		FALSE	0.130	72.000	0.000	NA		NA
2098633	2098634	BCG_0360	BCG_0361		dcd	FALSE	0.270	32.000	0.007	NA		NA
2098634	2098635	BCG_0361	BCG_0362	dcd	udgA	FALSE	0.055	106.000	0.000	1.000	N	NA
2098637	2098638	BCG_0364	BCG_0365			TRUE	0.734	7.000	0.000	1.000		NA
2098641	2098642	BCG_0368c	BCG_0369c			FALSE	0.316	27.000	0.000	1.000		NA
2098643	2098644	BCG_0370	BCG_0371			FALSE	0.129	75.000	0.000	NA		NA
2098644	2098645	BCG_0371	BCG_0372			TRUE	0.681	27.000	0.368	NA		NA
2098645	2098646	BCG_0372	BCG_0373		rmlA	TRUE	0.581	30.000	0.273	NA		NA
2098649	2098650	BCG_0376c	BCG_0377c	aspC		FALSE	0.241	31.000	0.023	1.000	N	NA
2098650	2098651	BCG_0377c	BCG_0378c			FALSE	0.149	109.000	0.057	1.000	N	NA
2098652	2098653	BCG_0379	BCG_0380		iniB	FALSE	0.114	189.000	0.286	NA		NA
2098653	2098654	BCG_0380	BCG_0381	iniB	iniA	TRUE	0.739	37.000	0.500	1.000		NA
2098654	2098655	BCG_0381	BCG_0382	iniA	iniC	TRUE	0.997	-3.000	0.583	0.007		NA
2098659	2098660	BCG_0386	BCG_0387			TRUE	0.752	3.000	0.000	NA		NA
2098660	2098661	BCG_0387	BCG_0388			TRUE	0.752	3.000	0.000	NA		NA
2098661	2098662	BCG_0388	BCG_0389		dnaK	FALSE	0.013	227.000	0.000	NA		NA
2098662	2098663	BCG_0389	BCG_0390	dnaK	grpE	TRUE	0.997	-3.000	0.074	0.005	Y	NA
2098663	2098664	BCG_0390	BCG_0391	grpE	dnaJ1	TRUE	0.913	36.000	0.068	0.005	Y	NA
2098664	2098665	BCG_0391	BCG_0392	dnaJ1	hspR	TRUE	0.911	0.000	0.074	1.000	N	NA
2098666	2098667	BCG_0393c	BCG_0394c	PPE8		FALSE	0.039	151.000	0.000	NA		NA
2098667	2098668	BCG_0394c	BCG_0395c		purA	TRUE	0.942	-3.000	0.052	NA		NA
2098669	2098670	BCG_0396	BCG_0397			TRUE	0.633	11.000	0.020	NA		NA
2098672	2098673	BCG_0399	BCG_0400		mgtE	FALSE	0.013	222.000	0.000	NA		NA
2098676	2098677	BCG_0403c	BCG_0404c			TRUE	0.673	25.000	0.000	0.051		NA
2098677	2098678	BCG_0404c	BCG_0405c			FALSE	0.203	29.000	0.000	NA		NA
2098678	2098679	BCG_0405c	BCG_0406c			FALSE	0.124	81.000	0.000	NA		NA
2098679	2098680	BCG_0406c	BCG_0407c			TRUE	0.886	6.000	0.208	NA		NA
2098680	2098681	BCG_0407c	BCG_0408c			FALSE	0.385	101.000	0.250	NA		NA
2098681	2098682	BCG_0408c	BCG_0409c			TRUE	0.966	-3.000	0.200	NA		NA
2098682	2098683	BCG_0409c	BCG_0410c			TRUE	0.981	-3.000	0.333	NA		NA
2098683	2098684	BCG_0410c	BCG_0411c			TRUE	0.848	19.000	0.750	NA	N	NA
2098684	2098685	BCG_0411c	BCG_0412c			TRUE	0.999	-3.000	0.818	0.001	Y	NA
2098685	2098686	BCG_0412c	BCG_0413c			TRUE	0.994	15.000	0.909	0.001	Y	NA
2098686	2098687	BCG_0413c	BCG_0414c			FALSE	0.323	76.000	0.250	NA	N	NA
2098688	2098689	BCG_0415	BCG_0416			FALSE	0.010	251.000	0.000	NA		NA
2098689	2098690	BCG_0416	BCG_0417		secE2	FALSE	0.073	119.000	0.000	NA		NA
2098691	2098692	BCG_0418c	BCG_0419c			FALSE	0.233	96.000	0.055	NA		NA
2098692	2098693	BCG_0419c	BCG_0420c		pyrE	FALSE	0.420	18.000	0.012	NA		NA
2098693	2098694	BCG_0420c	BCG_0421c	pyrE		FALSE	0.182	81.000	0.006	NA		NA
2098694	2098695	BCG_0421c	BCG_0422c		clpB	FALSE	0.075	141.000	0.009	NA		NA
2098696	2098697	BCG_0423	BCG_0424			FALSE	0.059	104.000	0.000	1.000	N	NA
2098699	2098700	BCG_0426	BCG_0427	purT		TRUE	0.817	-3.000	0.019	NA	N	NA
2098700	2098701	BCG_0427	BCG_0428		metZ	TRUE	0.907	-3.000	0.092	NA	N	NA
2098705	2098706	BCG_0432	BCG_0433			TRUE	0.648	6.000	0.000	NA		NA
2098706	2098707	BCG_0433	BCG_0434			FALSE	0.129	74.000	0.000	NA		NA
2098708	2098709	BCG_0435c	BCG_0436c		lpqK	TRUE	0.892	7.000	0.250	NA		NA
2098709	2098710	BCG_0436c	BCG_0437c	lpqK	fadE7	FALSE	0.384	10.000	0.000	1.000	N	NA
2098712	2098713	BCG_0439c	BCG_0440c	mmpL1b	mmpL1a	TRUE	0.979	-3.000	0.000	0.052		NA
2098713	2098714	BCG_0440c	BCG_0441c	mmpL1a	mmpS1	TRUE	0.995	-3.000	1.000	NA		NA
2098715	2098716	BCG_0442	BCG_0443	fadD30	pks6a	TRUE	0.998	-3.000	1.000	0.051		NA
2098716	2098717	BCG_0443	BCG_0444	pks6a	pks6b	TRUE	0.838	-13.000	0.000	0.011		NA
2098719	2098720	BCG_0446	BCG_0447	fgd1	pta	TRUE	0.720	-7.000	0.021	1.000		NA
2098720	2098721	BCG_0447	BCG_0448	pta	ackA	TRUE	0.825	-7.000	0.185	1.000		NA
2098722	2098723	BCG_0449c	BCG_0450c	pknG	glnH	TRUE	0.997	0.000	0.622	1.000	Y	NA
2098723	2098724	BCG_0450c	BCG_0451c	glnH		TRUE	0.992	0.000	0.895	NA		NA
2098727	2098728	BCG_0454	BCG_0455	thiO	thiS	TRUE	0.989	-3.000	0.625	1.000	N	NA
2098728	2098729	BCG_0455	BCG_0456	thiS	thiG	TRUE	0.948	-7.000	0.104	1.000	Y	NA
2098729	2098730	BCG_0456	BCG_0457	thiG	lpqL	FALSE	0.006	372.000	0.000	1.000		NA
2098730	2098731	BCG_0457	BCG_0458	lpqL	lpqM	FALSE	0.501	88.000	0.000	0.031		NA
2098732	2098733	BCG_0459c	BCG_0460c			FALSE	0.032	161.000	0.000	NA		NA
2098733	2098734	BCG_0460c	BCG_0461c		thiD	TRUE	0.944	-3.000	0.059	NA		NA
2098734	2098735	BCG_0461c	BCG_0462c	thiD	thiC	TRUE	0.919	27.000	0.015	0.006	Y	NA
2098735	2098736	BCG_0462c	BCG_0463c	thiC		FALSE	0.038	152.000	0.000	NA		NA
2098736	2098737	BCG_0463c	BCG_0464c		ctpH	TRUE	0.661	50.000	0.500	NA		NA
2098737	2098738	BCG_0464c	BCG_0465c	ctpH		FALSE	0.467	52.000	0.250	NA		NA
2098738	2098739	BCG_0465c	BCG_0466c		xthA	FALSE	0.031	201.000	0.015	NA		NA
2098739	2098740	BCG_0466c	BCG_0467c	xthA		TRUE	0.892	3.000	0.088	NA		NA
2098740	2098741	BCG_0467c	BCG_0468c		def	TRUE	0.982	0.000	0.488	NA		NA
2098742	2098743	BCG_0469	BCG_0470			FALSE	0.457	32.000	0.176	NA		NA
2098743	2098744	BCG_0470	BCG_0471		sodC	TRUE	0.717	33.000	0.500	NA		NA
2098744	2098745	BCG_0471	BCG_0472	sodC		TRUE	0.934	2.000	0.128	1.000		NA
2098745	2098746	BCG_0472	BCG_0473			FALSE	0.282	60.000	0.010	1.000		NA
2098747	2098748	BCG_0474c	BCG_0475c		pssA	TRUE	0.907	-3.000	0.025	1.000	N	NA
2098748	2098749	BCG_0475c	BCG_0476c	pssA	psd	TRUE	0.997	-3.000	0.466	1.000	Y	NA
2098749	2098750	BCG_0476c	BCG_0477c	psd	moeA2	FALSE	0.166	61.000	0.018	1.000	N	NA
2098750	2098751	BCG_0477c	BCG_0478c	moeA2		TRUE	0.670	19.000	0.188	1.000		NA
2098753	2098754	BCG_0480c	BCG_0481c		PPE10	FALSE	0.213	27.000	0.000	NA		NA
2098756	2098757	BCG_0483c	BCG_0484c		sigK	TRUE	0.783	44.000	0.778	NA		NA
2098757	2098758	BCG_0484c	BCG_0485c	sigK		FALSE	0.374	49.000	0.065	1.000		NA
2098758	2098759	BCG_0485c	BCG_0486c		ufaA1	TRUE	0.826	9.000	0.081	1.000		NA
2098759	2098760	BCG_0486c	BCG_0487c	ufaA1		TRUE	0.947	-3.000	0.067	NA		NA
2098760	2098761	BCG_0487c	BCG_0488c			TRUE	0.736	60.000	0.722	NA		NA
2098761	2098762	BCG_0488c	BCG_0489c		mmpL4	FALSE	0.321	40.000	0.007	1.000		NA
2098762	2098763	BCG_0489c	BCG_0490c	mmpL4	mmpS4	TRUE	0.991	-3.000	0.667	NA		NA
2098764	2098765	BCG_0491	BCG_0492		PPE11	FALSE	0.005	322.000	0.000	NA		NA
2098765	2098766	BCG_0492	BCG_0493	PPE11		FALSE	0.100	105.000	0.000	NA		NA
2098767	2098768	BCG_0494c	BCG_0495c		echA2	FALSE	0.241	68.000	0.039	NA		NA
2098768	2098769	BCG_0495c	BCG_0496c	echA2		FALSE	0.014	273.000	0.000	1.000		NA
2098769	2098770	BCG_0496c	BCG_0497c			FALSE	0.021	229.000	0.000	1.000		NA
2098771	2098772	BCG_0498	BCG_0499			TRUE	0.904	0.000	0.021	NA		NA
2098772	2098773	BCG_0499	BCG_0500			FALSE	0.255	60.000	0.042	NA		NA
2098773	2098774	BCG_0500	BCG_0501			TRUE	0.840	38.000	1.000	NA		NA
2098774	2098775	BCG_0501	BCG_0502		lpd	FALSE	0.217	64.000	0.017	NA		NA
2098775	2098776	BCG_0502	BCG_0503	lpd		TRUE	0.738	8.000	0.028	NA		NA
2098777	2098778	BCG_0504c	BCG_0505c			TRUE	0.977	-3.000	0.286	NA		NA
2098779	2098780	BCG_0506	BCG_0507		icl	FALSE	0.004	275.000	0.000	1.000	N	NA
2098780	2098781	BCG_0507	BCG_0508	icl	fadB2	FALSE	0.172	82.000	0.036	1.000	N	NA
2098781	2098782	BCG_0508	BCG_0509	fadB2	umaA1	FALSE	0.127	133.000	0.130	1.000	N	NA
2098783	2098784	BCG_0510c	BCG_0511c	pcaA		FALSE	0.075	143.000	0.000	1.000		NA
2098784	2098785	BCG_0511c	BCG_0512c			FALSE	0.225	-69.000	0.000	NA		NA
2098785	2098786	BCG_0512c	BCG_0513c			FALSE	0.535	10.000	0.000	NA		NA
2098787	2098788	BCG_0514	BCG_0515			FALSE	0.229	87.000	0.047	NA		NA
2098788	2098789	BCG_0515	BCG_0516		hbhA	FALSE	0.023	354.000	0.282	NA		NA
2098789	2098790	BCG_0516	BCG_0517	hbhA		FALSE	0.332	112.000	0.270	NA		NA
2098790	2098791	BCG_0517	BCG_0518			TRUE	0.876	5.000	0.143	NA		NA
2098791	2098792	BCG_0518	BCG_0519		deoC	TRUE	0.911	0.000	0.030	NA		NA
2098793	2098794	BCG_0520c	BCG_0521c			TRUE	0.951	-3.000	0.091	NA		NA
2098794	2098795	BCG_0521c	BCG_0522c			FALSE	0.352	33.000	0.061	NA		NA
2098796	2098797	BCG_0523	BCG_0524	murB	lprQ	FALSE	0.243	62.000	0.036	NA		NA
2098799	2098800	BCG_0526	BCG_0527			FALSE	0.188	48.000	0.082	NA	N	NA
2098800	2098801	BCG_0527	BCG_0528			TRUE	0.989	-3.000	0.541	NA		NA
2098801	2098802	BCG_0528	BCG_0529			FALSE	0.003	442.000	0.000	NA		NA
2098802	2098803	BCG_0529	BCG_0530		gpm1	FALSE	0.058	157.000	0.000	1.000		NA
2098803	2098804	BCG_0530	BCG_0531	gpm1	senX3	FALSE	0.080	174.000	0.196	1.000	N	NA
2098804	2098805	BCG_0531	BCG_0532	senX3	regX3	TRUE	0.634	151.000	0.437	1.000	Y	NA
2098806	2098807	BCG_0533c	BCG_0534c			TRUE	0.978	-3.000	0.300	NA		NA
2098807	2098808	BCG_0534c	BCG_0535c			TRUE	0.966	-3.000	0.200	NA		NA
2098811	2098812	BCG_0538	BCG_0539			TRUE	0.977	-3.000	0.286	NA		NA
2098812	2098813	BCG_0539	BCG_0540			TRUE	0.610	16.000	0.127	NA		NA
2098813	2098814	BCG_0540	BCG_0541			TRUE	0.575	16.000	0.076	NA		NA
2098814	2098815	BCG_0541	BCG_0542		proC	TRUE	0.562	25.000	0.143	1.000		NA
2098815	2098816	BCG_0542	BCG_0543	proC		FALSE	0.198	141.000	0.186	1.000		NA
2098816	2098817	BCG_0543	BCG_0544		galE2	FALSE	0.010	307.000	0.000	1.000		NA
2098817	2098818	BCG_0544	BCG_0545	galE2		TRUE	0.966	7.000	0.796	1.000	N	NA
2098819	2098820	BCG_0546c	BCG_0547c	cmaA2		TRUE	0.778	23.000	0.400	1.000		NA
2098820	2098821	BCG_0547c	BCG_0548c		serB1	FALSE	0.122	162.000	0.145	1.000		NA
2098822	2098823	BCG_0549	BCG_0550	mmpS2	mmpL2	TRUE	0.995	-3.000	1.000	NA		NA
2098823	2098824	BCG_0550	BCG_0551	mmpL2		TRUE	0.605	-7.000	0.007	NA		NA
2098824	2098825	BCG_0551	BCG_0552		hemA	FALSE	0.227	50.000	0.012	NA		NA
2098825	2098826	BCG_0552	BCG_0553	hemA	hemC	TRUE	0.987	10.000	0.178	0.002	Y	NA
2098826	2098827	BCG_0553	BCG_0554	hemC	hemD	TRUE	0.924	33.000	0.044	0.002	Y	NA
2098827	2098828	BCG_0554	BCG_0555	hemD	hemB	TRUE	0.944	86.000	0.429	0.002	Y	NA
2098828	2098829	BCG_0555	BCG_0556	hemB		TRUE	0.583	13.000	0.039	NA		NA
2098829	2098830	BCG_0556	BCG_0557			TRUE	0.983	-3.000	0.389	NA		NA
2098830	2098831	BCG_0557	BCG_0558			FALSE	0.105	103.000	0.000	NA		NA
2098833	2098834	BCG_0560	BCG_0561			FALSE	0.275	132.000	0.333	1.000	N	NA
2098836	2098837	BCG_0563	BCG_0564			FALSE	0.490	-7.000	0.000	NA		NA
2098837	2098838	BCG_0564	BCG_0565		gabP	FALSE	0.054	135.000	0.000	NA		NA
2098840	2098841	BCG_0567	BCG_0568	hemL		TRUE	0.927	0.000	0.204	NA	N	NA
2098841	2098842	BCG_0568	BCG_0569			FALSE	0.311	15.000	0.035	NA	N	NA
2098842	2098843	BCG_0569	BCG_0570		ccdA	TRUE	0.997	-3.000	0.500	1.000	Y	NA
2098843	2098844	BCG_0570	BCG_0571	ccdA		TRUE	0.790	33.000	0.131	NA	Y	NA
2098844	2098845	BCG_0571	BCG_0572		ccsA	TRUE	0.991	-3.000	0.082	NA	Y	NA
2098845	2098846	BCG_0572	BCG_0573	ccsA		FALSE	0.515	42.000	0.308	1.000	N	NA
2098846	2098847	BCG_0573	BCG_0574			FALSE	0.017	205.000	0.000	NA		NA
2098847	2098848	BCG_0574	BCG_0575		PE_PGRS6a	FALSE	0.042	147.000	0.000	NA		NA
2098848	2098849	BCG_0575	BCG_0576	PE_PGRS6a	PE_PGRS6b	FALSE	0.221	-94.000	0.000	NA		NA
2098850	2098851	BCG_0577c	BCG_0578c	fabH	menA	FALSE	0.137	82.000	0.011	1.000	N	NA
2098852	2098853	BCG_0579	BCG_0580	pnp	galE3	TRUE	0.885	-3.000	0.008	1.000	N	NA
2098855	2098856	BCG_0582	BCG_0583			FALSE	0.269	57.000	0.048	NA		NA
2098856	2098857	BCG_0583	BCG_0584			TRUE	0.953	-3.000	0.109	NA		NA
2098858	2098859	BCG_0585c	BCG_0586c		menE	FALSE	0.552	12.000	0.008	NA		NA
2098859	2098860	BCG_0586c	BCG_0587c	menE		FALSE	0.222	69.000	0.024	NA		NA
2098860	2098861	BCG_0587c	BCG_0588c			FALSE	0.138	60.000	0.000	NA		NA
2098861	2098862	BCG_0588c	BCG_0589c		pitA	TRUE	0.876	-3.000	0.000	NA		NA
2098862	2098863	BCG_0589c	BCG_0590c	pitA		FALSE	0.210	120.000	0.167	NA		NA
2098863	2098864	BCG_0590c	BCG_0591c			FALSE	0.283	63.000	0.069	NA		NA
2098864	2098865	BCG_0591c	BCG_0592c		menB	FALSE	0.239	96.000	0.008	1.000		NA
2098865	2098866	BCG_0592c	BCG_0593c	menB		FALSE	0.008	272.000	0.000	NA		NA
2098866	2098867	BCG_0593c	BCG_0594c			FALSE	0.252	-33.000	0.000	NA		NA
2098867	2098868	BCG_0594c	BCG_0595c			TRUE	0.876	-3.000	0.000	NA		NA
2098868	2098869	BCG_0595c	BCG_0596c		fadD8	FALSE	0.020	192.000	0.000	NA		NA
2098870	2098871	BCG_0597	BCG_0598		menC	TRUE	0.952	-3.000	0.028	1.000		NA
2098871	2098872	BCG_0598	BCG_0599	menC	bpoC	TRUE	0.985	-3.000	0.038	0.050		NA
2098872	2098873	BCG_0599	BCG_0600	bpoC	menD	FALSE	0.338	43.000	0.022	1.000		NA
2098873	2098874	BCG_0600	BCG_0601	menD		TRUE	0.943	-3.000	0.055	NA		NA
2098874	2098875	BCG_0601	BCG_0602		pimB	FALSE	0.457	62.000	0.259	NA		NA
2098875	2098876	BCG_0602	BCG_0603	pimB	menH	FALSE	0.356	17.000	0.013	1.000	N	NA
2098877	2098878	BCG_0604c	BCG_0605c			FALSE	0.500	34.000	0.222	NA		NA
2098878	2098879	BCG_0605c	BCG_0606c			FALSE	0.301	25.000	0.029	1.000	N	NA
2098880	2098881	BCG_0607	BCG_0608	grcC1	htpX	FALSE	0.160	101.000	0.042	1.000	N	NA
2098882	2098883	BCG_0609c	BCG_0610c	gpdA1		FALSE	0.276	61.000	0.133	1.000	N	NA
2098883	2098884	BCG_0610c	BCG_0611c			FALSE	0.184	78.000	0.005	NA		NA
5582075	2098886	BCG_t03	BCG_0612	tRNA-Tyr		FALSE	0.059	132.000	0.000	NA		NA
2098886	2098887	BCG_0612	BCG_0613		cyp135B1	FALSE	0.049	110.000	0.000	1.000	N	NA
2098887	2098888	BCG_0613	BCG_0614	cyp135B1		FALSE	0.054	135.000	0.000	NA		NA
2098888	2098889	BCG_0614	BCG_0615		nrdZ	TRUE	0.629	26.000	0.286	NA		NA
2098890	2098891	BCG_0616c	BCG_0617c			FALSE	0.013	224.000	0.000	NA		NA
2098891	2098892	BCG_0617c	BCG_0618c			FALSE	0.003	468.000	0.000	NA		NA
2098892	2098893	BCG_0618c	BCG_0619c			FALSE	0.075	10.000	0.000	NA	N	NA
2098893	2098894	BCG_0619c	BCG_0620c			FALSE	0.001	216.000	0.000	NA	N	NA
2098895	2098896	BCG_0621	BCG_0622		TB27.3	TRUE	0.619	14.000	0.080	NA		NA
2098900	2098901	BCG_0626	BCG_0627			TRUE	0.964	-3.000	0.182	NA		NA
2098905	2098906	BCG_0631	BCG_0632		yrbE2A	TRUE	0.816	-3.000	0.019	NA	N	NA
2098906	2098907	BCG_0632	BCG_0633	yrbE2A	yrbE2B	TRUE	0.990	2.000	0.333	NA	Y	NA
2098907	2098908	BCG_0633	BCG_0634	yrbE2B	mce2A	TRUE	0.994	6.000	1.000	NA	Y	NA
2098908	2098909	BCG_0634	BCG_0635	mce2A	mce2B	TRUE	0.999	-3.000	1.000	0.007	Y	NA
2098909	2098910	BCG_0635	BCG_0636	mce2B	mce2C	TRUE	0.999	-3.000	0.667	0.007	Y	NA
2098910	2098911	BCG_0636	BCG_0637	mce2C	mce2Da	TRUE	0.999	-3.000	0.667	0.007	Y	NA
2098911	2098912	BCG_0637	BCG_0639	mce2Da	lprL	TRUE	0.970	-25.000	0.333	0.007	Y	NA
2098912	2098913	BCG_0639	BCG_0640	lprL	mce2F	TRUE	0.996	5.000	0.500	0.007	Y	NA
2098914	2098915	BCG_0641c	BCG_0642c			TRUE	0.876	-3.000	0.000	NA		NA
2098915	2098916	BCG_0642c	BCG_0643c			FALSE	0.023	183.000	0.000	NA		NA
2098916	2098917	BCG_0643c	BCG_0644c			FALSE	0.010	251.000	0.000	NA		NA
2098917	2098918	BCG_0644c	BCG_0645c			TRUE	0.984	-3.000	0.400	NA		NA
2098918	2098919	BCG_0645c	BCG_0646c			FALSE	0.103	104.000	0.000	NA		NA
2098919	2098920	BCG_0646c	BCG_0647c			FALSE	0.499	114.000	0.000	0.002		NA
2098920	2098921	BCG_0647c	BCG_0648c		tcrA	FALSE	0.241	44.000	0.000	1.000		NA
2098922	2098923	BCG_0649	BCG_0650		lpqO	FALSE	0.130	72.000	0.000	NA		NA
2098923	2098924	BCG_0650	BCG_0651	lpqO		FALSE	0.014	217.000	0.000	NA		NA
2098924	2098925	BCG_0651	BCG_0652			TRUE	0.778	2.000	0.000	NA		NA
2098925	2098926	BCG_0652	BCG_0653			FALSE	0.144	54.000	0.000	NA		NA
2098926	2098927	BCG_0653	BCG_0654			FALSE	0.155	45.000	0.000	NA		NA
2098927	2098928	BCG_0654	BCG_0655			TRUE	0.975	-3.000	0.273	NA		NA
2098928	2098929	BCG_0655	BCG_0656			FALSE	0.237	-57.000	0.000	NA		NA
2098930	2098931	BCG_0657c	BCG_0658c			FALSE	0.145	52.000	0.000	NA		NA
2098934	2098935	BCG_0661	BCG_0662			TRUE	0.876	-3.000	0.000	NA		NA
2098937	2098938	BCG_0663A	BCG_0664			TRUE	0.876	-3.000	0.000	NA		NA
2098938	2098939	BCG_0664	BCG_0665		galT	FALSE	0.063	129.000	0.000	NA		NA
2098939	2098940	BCG_0665	BCG_0666	galT	galK	TRUE	0.995	-3.000	0.370	0.001	N	NA
2098940	2098941	BCG_0666	BCG_0667	galK		FALSE	0.003	395.000	0.000	NA		NA
2098941	2098942	BCG_0667	BCG_0668			TRUE	0.870	11.000	0.333	NA		NA
2098942	2098943	BCG_0668	BCG_0669			FALSE	0.117	93.000	0.000	NA		NA
2098943	2098944	BCG_0669	BCG_0670			TRUE	0.954	0.000	0.200	NA		NA
2098946	2098947	BCG_0672	BCG_0673			TRUE	0.995	-3.000	1.000	NA		NA
2098948	2098949	BCG_0674c	BCG_0675c		recD	FALSE	0.117	93.000	0.000	NA		NA
2098949	2098950	BCG_0675c	BCG_0676c	recD	recBb	TRUE	0.876	-3.000	0.000	NA		NA
2098950	2098951	BCG_0676c	BCG_0677c	recBb	recBa	FALSE	0.214	-114.000	0.000	NA		NA
2098951	2098952	BCG_0677c	BCG_0678c	recBa	recC	TRUE	0.999	0.000	0.542	0.001	Y	NA
2098952	2098953	BCG_0678c	BCG_0679c	recC	echA3	FALSE	0.004	277.000	0.000	1.000	N	NA
2098953	2098954	BCG_0679c	BCG_0680c	echA3		FALSE	0.305	49.000	0.067	NA		NA
2098954	2098955	BCG_0680c	BCG_0681c			FALSE	0.057	154.000	0.006	NA		NA
2098956	5582076	BCG_0682	BCG_t04		tRNA-Thr	FALSE	0.062	130.000	0.000	NA		NA
5582076	5582077	BCG_t04	BCG_t05	tRNA-Thr	tRNA-Met	FALSE	0.173	37.000	0.000	NA		NA
5582077	2098959	BCG_t05	BCG_0683	tRNA-Met	rpmG2	FALSE	0.175	36.000	0.000	NA		NA
2098959	2098960	BCG_0683	BCG_0684	rpmG2		FALSE	0.313	51.000	0.079	NA		NA
2098960	2098961	BCG_0684	BCG_0685			TRUE	0.927	-13.000	0.818	NA		NA
2098961	2098962	BCG_0685	BCG_0686			TRUE	0.995	4.000	0.818	NA	Y	NA
2098962	5582078	BCG_0686	BCG_t06		tRNA-Trp	FALSE	0.018	199.000	0.000	NA		NA
5582078	2098964	BCG_t06	BCG_0687	tRNA-Trp	secE1	FALSE	0.047	141.000	0.000	NA		NA
2098964	2098965	BCG_0687	BCG_0688	secE1	nusG	FALSE	0.198	32.000	0.006	1.000	N	NA
2098965	2098966	BCG_0688	BCG_0689	nusG	rplK	TRUE	0.714	52.000	0.681	1.000	N	NA
2098966	2098967	BCG_0689	BCG_0690	rplK	rplA	TRUE	0.965	67.000	0.838	0.022	Y	NA
2098968	2098969	BCG_0691c	BCG_0692c	mmaA4	mmaA3	TRUE	0.926	65.000	0.286	0.004	Y	NA
2098969	2098970	BCG_0692c	BCG_0693c	mmaA3	mmaA2	TRUE	0.879	148.000	0.667	0.004	Y	NA
2098970	2098971	BCG_0693c	BCG_0694c	mmaA2	mmaA1	TRUE	0.755	167.000	0.400	0.004	Y	NA
2098971	2098972	BCG_0694c	BCG_0695c	mmaA1	lipG	TRUE	0.637	47.000	0.444	NA		NA
2098972	2098973	BCG_0695c	BCG_0696c	lipG		TRUE	0.792	12.000	0.243	NA		NA
2098974	2098975	BCG_0697	BCG_0698		fabD2	TRUE	0.995	-3.000	0.857	1.000		NA
2098975	2098976	BCG_0698	BCG_0699	fabD2		TRUE	0.898	0.000	0.000	1.000		NA
2098976	2098977	BCG_0699	BCG_0700		rplJ	FALSE	0.003	331.000	0.000	1.000	N	NA
2098977	2098978	BCG_0700	BCG_0701	rplJ	rplL	TRUE	0.977	37.000	0.884	0.017	Y	NA
2098980	2098981	BCG_0703	BCG_0704		mkl	FALSE	0.391	12.000	0.038	NA	N	NA
2098982	2098983	BCG_0705c	BCG_0706c			FALSE	0.116	95.000	0.000	NA		NA
2098983	2098984	BCG_0706c	BCG_0707c			FALSE	0.128	76.000	0.000	NA		NA
2098984	2098985	BCG_0707c	BCG_0708c			FALSE	0.008	276.000	0.000	NA		NA
2098985	2098986	BCG_0708c	BCG_0709c			FALSE	0.511	-13.000	0.000	1.000		NA
2098986	2098987	BCG_0709c	BCG_0710c			FALSE	0.087	110.000	0.000	NA		NA
2098987	2098988	BCG_0710c	BCG_0711c			TRUE	0.876	-3.000	0.000	NA		NA
2098989	2098990	BCG_0712	BCG_0713	atsD		FALSE	0.188	32.000	0.000	NA		NA
2098990	2098991	BCG_0713	BCG_0714			TRUE	0.876	-3.000	0.000	NA		NA
2098991	2098992	BCG_0714	BCG_0715			TRUE	0.876	-3.000	0.000	NA		NA
2098992	2098993	BCG_0715	BCG_0716		rpoB	FALSE	0.003	498.000	0.000	NA		NA
2098993	2098994	BCG_0716	BCG_0717	rpoB	rpoC	TRUE	0.980	45.000	0.851	0.001	Y	NA
2098996	2098997	BCG_0719	BCG_0720	end	lpqP	FALSE	0.190	32.000	0.004	1.000	N	NA
2098997	2098998	BCG_0720	BCG_0721	lpqP	fadE8	FALSE	0.239	60.000	0.071	1.000	N	NA
2098998	2098999	BCG_0721	BCG_0722	fadE8	echA4	TRUE	0.966	11.000	0.286	1.000	Y	NA
2098999	2099000	BCG_0722	BCG_0723	echA4		TRUE	0.924	3.000	0.292	NA	N	NA
2099000	2099001	BCG_0723	BCG_0724		echA5	TRUE	0.903	-3.000	0.083	NA	N	NA
2099002	2099003	BCG_0725c	BCG_0726c	mmpL5	mmpS5	TRUE	0.995	-3.000	1.000	NA		NA
2099005	2099006	BCG_0728c	BCG_0729c			TRUE	0.985	2.000	0.778	NA		NA
2099007	2099008	BCG_0730	BCG_0731		rpsL	FALSE	0.005	249.000	0.000	1.000	N	NA
2099008	2099009	BCG_0731	BCG_0732	rpsL	rpsG	TRUE	0.999	0.000	0.620	0.003	Y	NA
2099009	2099010	BCG_0732	BCG_0733	rpsG	fusA1	TRUE	0.886	81.000	0.579	1.000	Y	NA
2099010	2099011	BCG_0733	BCG_0734	fusA1	tuf	TRUE	0.615	231.000	0.400	0.001	Y	NA
2099011	2099012	BCG_0734	BCG_0735	tuf		FALSE	0.050	138.000	0.000	NA		NA
2099012	2099013	BCG_0735	BCG_0736			FALSE	0.217	153.000	0.333	NA		NA
2099013	2099014	BCG_0736	BCG_0737			TRUE	0.896	14.000	0.214	0.056		NA
2099015	2099016	BCG_0738c	BCG_0739c			FALSE	0.002	613.000	0.000	NA		NA
2099016	2099017	BCG_0739c	BCG_0740c			TRUE	0.951	-3.000	0.088	NA		NA
2099018	2099019	BCG_0741	BCG_0742		pqqE	TRUE	0.987	-3.000	0.484	NA		NA
2099019	2099020	BCG_0742	BCG_0743	pqqE	lldD1	TRUE	0.978	3.000	0.548	1.000		NA
2099020	2099021	BCG_0743	BCG_0744	lldD1		FALSE	0.205	190.000	0.464	1.000		NA
2099021	2099022	BCG_0744	BCG_0745			TRUE	0.627	49.000	0.440	NA		NA
2099022	2099023	BCG_0745	BCG_0746			TRUE	0.982	2.000	0.667	NA		NA
2099023	2099024	BCG_0746	BCG_0747			FALSE	0.003	461.000	0.000	NA		NA
2099024	2099025	BCG_0747	BCG_0748			FALSE	0.151	48.000	0.000	NA		NA
2099025	2099026	BCG_0748	BCG_0749			FALSE	0.022	185.000	0.000	NA		NA
2099026	2099027	BCG_0749	BCG_0750		rpsJ	FALSE	0.002	637.000	0.000	NA		NA
2099027	2099028	BCG_0750	BCG_0751	rpsJ	rplC	TRUE	0.979	17.000	0.467	0.022	Y	NA
2099028	2099029	BCG_0751	BCG_0752	rplC	rplD	TRUE	0.998	0.000	0.361	0.017	Y	NA
2099029	2099030	BCG_0752	BCG_0753	rplD	rplW	TRUE	0.998	0.000	0.513	0.017	Y	NA
2099030	2099031	BCG_0753	BCG_0754	rplW	rplB	TRUE	0.896	147.000	0.849	0.014	Y	NA
2099031	2099032	BCG_0754	BCG_0755	rplB	rpsS	TRUE	0.972	41.000	0.820	0.022	Y	NA
2099032	2099033	BCG_0755	BCG_0756	rpsS	rplV	TRUE	0.999	-3.000	0.769	0.022	Y	NA
2099033	2099034	BCG_0756	BCG_0757	rplV	rpsC	TRUE	0.999	0.000	0.719	0.022	Y	NA
2099034	2099035	BCG_0757	BCG_0758	rpsC	rplP	TRUE	0.998	4.000	0.828	0.022	Y	NA
2099035	2099036	BCG_0758	BCG_0759	rplP	rpmC	TRUE	0.999	0.000	0.802	0.017	Y	NA
2099036	2099037	BCG_0759	BCG_0760	rpmC	rpsQ	TRUE	0.999	-3.000	0.828	0.017	Y	NA
2099037	2099038	BCG_0760	BCG_0761	rpsQ	atsA	FALSE	0.029	169.000	0.005	1.000	N	NA
2099038	2099039	BCG_0761	BCG_0762	atsA		FALSE	0.478	48.000	0.250	NA		NA
2099039	2099040	BCG_0762	BCG_0763			FALSE	0.076	301.000	0.600	NA		NA
2099040	2099041	BCG_0763	BCG_0764		rplN	FALSE	0.003	487.000	0.000	NA		NA
2099041	2099042	BCG_0764	BCG_0765	rplN	rplX	TRUE	0.999	1.000	0.810	0.022	Y	NA
2099042	2099043	BCG_0765	BCG_0766	rplX	rplE	TRUE	0.999	0.000	0.758	0.017	Y	NA
2099043	2099044	BCG_0766	BCG_0767	rplE	rpsN1	TRUE	0.996	5.000	0.496	0.017	Y	NA
2099044	2099045	BCG_0767	BCG_0768	rpsN1	rpsH	TRUE	0.759	164.000	0.473	0.017	Y	NA
2099045	2099046	BCG_0768	BCG_0769	rpsH	rplF	TRUE	0.983	24.000	0.808	0.017	Y	NA
2099046	2099047	BCG_0769	BCG_0770	rplF	rplR	TRUE	0.998	3.000	0.815	0.017	Y	NA
2099047	2099048	BCG_0770	BCG_0771	rplR	rpsE	TRUE	0.986	20.000	0.814	0.022	Y	NA
2099048	2099049	BCG_0771	BCG_0772	rpsE	rpmD	TRUE	0.998	3.000	0.789	0.022	Y	NA
2099049	2099050	BCG_0772	BCG_0773	rpmD	rplO	TRUE	0.999	0.000	0.653	0.002	Y	NA
2099050	2099051	BCG_0773	BCG_0774	rplO	sppA	FALSE	0.109	33.000	0.000	1.000	N	NA
2099052	2099053	BCG_0775c	BCG_0776c			TRUE	0.582	93.000	0.000	NA	Y	NA
2099053	2099054	BCG_0776c	BCG_0777c		fucA	FALSE	0.001	203.000	0.000	NA	N	NA
2099054	2099055	BCG_0777c	BCG_0778c	fucA	serA2	TRUE	0.927	-3.000	0.058	1.000	N	NA
2099056	2099057	BCG_0779	BCG_0780	xylB		TRUE	0.637	13.000	0.018	1.000		NA
2099059	2099060	BCG_0782	BCG_0783	secY	adk	TRUE	0.926	-3.000	0.057	1.000	N	NA
2099060	2099061	BCG_0783	BCG_0784	adk	mapA	TRUE	0.974	3.000	0.606	1.000	N	NA
2099061	2099062	BCG_0784	BCG_0785	mapA	sigL	FALSE	0.245	73.000	0.099	1.000	N	NA
2099062	2099063	BCG_0785	BCG_0786	sigL		TRUE	0.901	64.000	0.697	NA	Y	NA
2099063	2099064	BCG_0786	BCG_0787			FALSE	0.075	315.000	0.065	NA	Y	NA
2099064	2099065	BCG_0787	BCG_0788			FALSE	0.004	358.000	0.000	NA		NA
2099065	2099066	BCG_0788	BCG_0789			FALSE	0.017	205.000	0.000	NA		NA
2099066	2099067	BCG_0789	BCG_0790			FALSE	0.079	115.000	0.000	NA		NA
2099067	2099068	BCG_0790	BCG_0791			FALSE	0.012	231.000	0.000	NA		NA
2099068	2099069	BCG_0791	BCG_0792		PE_PGRS8	FALSE	0.046	142.000	0.000	NA		NA
2099070	2099071	BCG_0793c	BCG_0794c			TRUE	0.876	-3.000	0.000	NA		NA
2099072	2099073	BCG_0795	BCG_0796		PE_PGRS9	FALSE	0.280	20.000	0.000	NA		NA
2099073	2099074	BCG_0796	BCG_0797	PE_PGRS9	PE_PGRS10	FALSE	0.003	399.000	0.000	NA		NA
2099074	2099075	BCG_0797	BCG_0798	PE_PGRS10		FALSE	0.186	91.000	0.000	1.000		NA
2099075	2099076	BCG_0798	BCG_0799			FALSE	0.243	24.000	0.000	NA		NA
2099079	2099080	BCG_0802c	BCG_0803c	mmsB	fadE9	TRUE	0.942	11.000	0.051	1.000	Y	NA
2099080	2099081	BCG_0803c	BCG_0804c	fadE9	mmsA	TRUE	0.838	7.000	0.197	1.000	N	NA
2099083	2099084	BCG_0806c	BCG_0807c	PPE12		FALSE	0.006	302.000	0.000	NA		NA
2099084	5582079	BCG_0807c	BCG_t07		tRNA-Thr	FALSE	0.079	115.000	0.000	NA		NA
5582079	2099086	BCG_t07	BCG_0808c	tRNA-Thr		FALSE	0.207	28.000	0.000	NA		NA
2099087	2099088	BCG_0809	BCG_0810	phoP	phoR	TRUE	0.968	45.000	0.824	0.049	Y	NA
2099089	2099090	BCG_0811c	BCG_0812c			FALSE	0.202	109.000	0.014	1.000		NA
2099090	2099091	BCG_0812c	BCG_0813c		adhB	TRUE	0.936	13.000	0.750	1.000		NA
2099091	2099092	BCG_0813c	BCG_0814c	adhB		FALSE	0.520	99.000	0.400	NA		NA
2099092	2099093	BCG_0814c	BCG_0815c			TRUE	0.984	3.000	0.800	NA		NA
2099093	2099094	BCG_0815c	BCG_0816c		cyp51	TRUE	0.976	3.000	0.733	NA	N	NA
2099094	2099095	BCG_0816c	BCG_0817c	cyp51		TRUE	0.966	0.000	0.212	1.000		NA
2099095	2099096	BCG_0817c	BCG_0818c		cyp123	TRUE	0.572	-418.000	0.231	1.000		NA
2099096	2099097	BCG_0818c	BCG_0819c	cyp123		TRUE	0.988	-3.000	0.571	1.000	N	NA
2099098	2099099	BCG_0820	BCG_0821	aldA		TRUE	0.814	31.000	0.812	1.000	N	NA
2099099	2099100	BCG_0821	BCG_0822			TRUE	0.853	98.000	0.480	1.000	Y	NA
2099100	2099101	BCG_0822	BCG_0823			TRUE	0.991	-3.000	0.560	1.000		NA
2099101	2099102	BCG_0823	BCG_0824		purD	TRUE	0.636	12.000	0.003	1.000		NA
2099103	2099104	BCG_0825c	BCG_0826c	ggtA		FALSE	0.379	51.000	0.073	1.000		NA
2099107	2099108	BCG_0829	BCG_0830	purB	cyp126	TRUE	0.697	5.000	0.006	1.000	N	NA
2099110	2099111	BCG_0832	BCG_0833	purC	ptrB	TRUE	0.913	-3.000	0.035	1.000	N	NA
2099113	2099114	BCG_0835	BCG_0836			TRUE	0.617	16.000	0.048	1.000		NA
2099114	2099115	BCG_0836	BCG_0837			TRUE	0.786	18.000	0.024	0.056		NA
2099117	2099118	BCG_0839	BCG_0840			FALSE	0.098	106.000	0.000	NA		NA
2099118	2099119	BCG_0840	BCG_0841		purQ	TRUE	0.999	-3.000	0.656	0.001	Y	NA
2099120	2099121	BCG_0842c	BCG_0843c			FALSE	0.261	22.000	0.000	NA		NA
2099121	2099122	BCG_0843c	BCG_0844c			TRUE	0.948	-3.000	0.070	NA		NA
2099122	2099123	BCG_0844c	BCG_0845c			TRUE	0.958	-3.000	0.250	NA	N	NA
2099125	2099126	BCG_0847c	BCG_0848c			TRUE	0.812	-12.000	0.000	0.067		NA
2099128	2099129	BCG_0850c	BCG_0851c	cfp29		TRUE	0.975	-3.000	0.267	NA		NA
2099130	2099131	BCG_0852	BCG_0853	pepC		TRUE	0.616	12.000	0.038	NA		NA
2099133	2099134	BCG_0855	BCG_0856	purL		TRUE	0.924	-3.000	0.000	1.000		NA
2099134	2099135	BCG_0856	BCG_0857			FALSE	0.114	121.000	0.000	1.000		NA
2099137	2099138	BCG_0859	BCG_0860		purF	FALSE	0.216	87.000	0.034	NA		NA
2099138	2099139	BCG_0860	BCG_0861	purF	purM	TRUE	0.864	31.000	0.248	1.000	Y	NA
2099140	2099141	BCG_0862c	BCG_0863c			FALSE	0.073	147.000	0.017	NA		NA
2099143	2099144	BCG_0865c	BCG_0866c		sseC2	FALSE	0.063	163.000	0.043	NA		NA
2099144	2099145	BCG_0866c	BCG_0867c	sseC2	cysA2	TRUE	0.982	2.000	0.557	1.000		NA
2099145	2099146	BCG_0867c	BCG_0868c	cysA2	thiX	FALSE	0.011	293.000	0.000	1.000		NA
2099146	2099147	BCG_0868c	BCG_0869c	thiX		TRUE	0.983	-3.000	0.371	NA		NA
2099148	2099149	BCG_0870	BCG_0871			TRUE	0.973	-3.000	0.196	1.000		NA
2099149	2099150	BCG_0871	BCG_0872		phoTa	FALSE	0.330	43.000	0.016	1.000		NA
2099150	2099151	BCG_0872	BCG_0873	phoTa	phoTb	FALSE	0.232	-60.000	0.000	NA		NA
2099152	2099153	BCG_0874c	BCG_0875c	phoY2		TRUE	0.609	58.000	0.579	NA	N	NA
2099153	2099154	BCG_0875c	BCG_0876c			FALSE	0.012	166.000	0.005	NA	N	NA
2099154	2099155	BCG_0876c	BCG_0877c		desA1	FALSE	0.237	88.000	0.004	1.000		NA
2099155	2099156	BCG_0877c	BCG_0878c	desA1		FALSE	0.242	162.000	0.375	1.000		NA
2099158	2099159	BCG_0880c	BCG_0881c			FALSE	0.081	58.000	0.000	1.000	N	NA
2099160	2099161	BCG_0882	BCG_0883			FALSE	0.100	105.000	0.000	NA		NA
2099162	5582080	BCG_0884c	BCG_t08		tRNA-Lys	FALSE	0.116	94.000	0.000	NA		NA
5582081	5582082	BCG_t09	BCG_t10	tRNA-Glu	tRNA-Asp	FALSE	0.170	38.000	0.000	NA		NA
5582082	5582083	BCG_t10	BCG_t11	tRNA-Asp	tRNA-Phe	FALSE	0.198	30.000	0.000	NA		NA
5582083	2099167	BCG_t11	BCG_0885	tRNA-Phe	PE_PGRS13	FALSE	0.002	665.000	0.000	NA		NA
2099170	2099171	BCG_0888c	BCG_0889c			FALSE	0.130	71.000	0.000	NA		NA
2099172	2099173	BCG_0890	BCG_0891	lpqR		FALSE	0.165	87.000	0.033	1.000	N	NA
2099175	2099176	BCG_0893	BCG_0894			FALSE	0.007	277.000	0.000	NA		NA
2099176	2099177	BCG_0894	BCG_0895			FALSE	0.478	-16.000	0.000	1.000		NA
2099181	2099182	BCG_0899	BCG_0900	lpqS	cysK2	FALSE	0.017	203.000	0.000	NA		NA
2099182	2099183	BCG_0900	BCG_0901	cysK2		TRUE	0.986	0.000	0.500	1.000		NA
2099183	2099184	BCG_0901	BCG_0902			TRUE	0.876	-3.000	0.000	NA		NA
2099188	2099189	BCG_0906	BCG_0907		far	TRUE	0.929	6.000	0.333	NA		NA
2099189	2099190	BCG_0907	BCG_0908	far		FALSE	0.081	113.000	0.000	NA		NA
2099190	2099191	BCG_0908	BCG_0909			FALSE	0.207	28.000	0.000	NA		NA
2099193	2099194	BCG_0911	BCG_0912	fadA	fadB	TRUE	0.994	5.000	0.750	1.000	Y	NA
2099195	2099196	BCG_0913c	BCG_0914c			FALSE	0.182	138.000	0.206	NA		NA
2099197	2099198	BCG_0915	BCG_0916		moaC2	FALSE	0.186	84.000	0.012	NA		NA
2099198	2099199	BCG_0916	BCG_0917	moaC2	mog	TRUE	0.997	-3.000	0.016	0.005	Y	NA
2099199	2099200	BCG_0917	BCG_0918	mog	moaE2	TRUE	0.997	-3.000	0.015	0.005	Y	NA
2099201	2099202	BCG_0919c	BCG_0920c	rpfA	moaD2	FALSE	0.005	448.000	0.000	1.000		NA
2099202	2099203	BCG_0920c	BCG_0921c	moaD2	moaA2	TRUE	0.990	4.000	0.410	1.000	Y	NA
2099203	2099204	BCG_0921c	BCG_0922c	moaA2		TRUE	0.932	-3.000	0.026	NA		NA
2099208	2099209	BCG_0926c	BCG_0927c			FALSE	0.110	100.000	0.000	NA		NA
2099209	2099210	BCG_0927c	BCG_0928c			TRUE	0.985	-3.000	0.432	NA		NA
2099212	2099213	BCG_0930c	BCG_0931c	PPE13		FALSE	0.007	278.000	0.000	NA		NA
2099214	2099215	BCG_0932	BCG_0933			TRUE	0.910	-3.000	0.029	1.000	N	NA
2099215	2099216	BCG_0933	BCG_0934			TRUE	0.949	-3.000	0.075	NA		NA
2099217	2099218	BCG_0935c	BCG_0936c		serC	FALSE	0.135	157.000	0.214	NA		NA
2099219	2099220	BCG_0937	BCG_0938		fprB	TRUE	0.914	19.000	0.846	1.000		NA
2099223	2099224	BCG_0941c	BCG_0942c	citA		FALSE	0.187	87.000	0.000	1.000		NA
2099224	2099225	BCG_0942c	BCG_0943c			TRUE	0.857	2.000	0.000	1.000		NA
2099228	2099229	BCG_0946	BCG_0947			FALSE	0.128	77.000	0.000	NA		NA
2099229	2099230	BCG_0947	BCG_0948		gltA2	FALSE	0.021	190.000	0.000	NA		NA
2099231	2099232	BCG_0949c	BCG_0950c			FALSE	0.440	26.000	0.091	NA		NA
2099233	2099234	BCG_0951	BCG_0952	ompA		TRUE	0.798	13.000	0.286	NA		NA
2099234	2099235	BCG_0952	BCG_0953			TRUE	0.988	0.000	0.667	NA		NA
2099236	2099237	BCG_0954c	BCG_0955c	prrB	prrA	TRUE	0.970	11.000	0.333	1.000	Y	NA
2099237	2099238	BCG_0955c	BCG_0956c	prrA	accD3	FALSE	0.034	131.000	0.000	1.000	N	NA
2099239	2099240	BCG_0957	BCG_0958	echA6		TRUE	0.924	6.000	0.314	NA		NA
2099240	2099241	BCG_0958	BCG_0959			FALSE	0.322	93.000	0.171	NA		NA
2099241	2099242	BCG_0959	BCG_0960		ctpE	TRUE	0.943	-3.000	0.119	1.000	N	NA
2099242	2099243	BCG_0960	BCG_0961	ctpE		FALSE	0.002	557.000	0.000	NA		NA
2099243	2099244	BCG_0961	BCG_0962			TRUE	0.873	6.000	0.182	NA		NA
2099244	2099245	BCG_0962	BCG_0963			FALSE	0.113	98.000	0.000	NA		NA
2099245	2099246	BCG_0963	BCG_0964			FALSE	0.283	65.000	0.071	NA		NA
2099247	2099248	BCG_0965c	BCG_0966c			TRUE	0.956	2.000	0.417	NA	N	NA
2099248	2099249	BCG_0966c	BCG_0967c		PPE14	FALSE	0.009	93.000	0.000	NA	N	NA
2099249	2099250	BCG_0967c	BCG_0968c	PPE14	PE7	FALSE	0.359	15.000	0.000	NA		NA
2099251	2099252	BCG_0969	BCG_0970	betP		FALSE	0.008	343.000	0.000	1.000		NA
2099252	2099253	BCG_0970	BCG_0971			TRUE	0.964	-3.000	0.091	1.000		NA
5582084	2099255	BCG_t12	BCG_0972c	tRNA-Arg		FALSE	0.103	104.000	0.000	NA		NA
2099256	2099257	BCG_0973	BCG_0974			TRUE	0.982	0.000	0.000	NA	Y	NA
2099258	2099259	BCG_0975c	BCG_0976c		mntH	TRUE	0.886	1.000	0.029	NA		NA
2099259	2099260	BCG_0976c	BCG_0977c	mntH		FALSE	0.287	32.000	0.014	NA		NA
2099260	2099261	BCG_0977c	BCG_0978c			FALSE	0.210	77.000	0.018	NA		NA
2099261	2099262	BCG_0978c	BCG_0979c			TRUE	0.694	54.000	0.500	1.000		NA
2099263	2099264	BCG_0980	BCG_0981	pstS3	pstC2	TRUE	0.977	13.000	0.200	0.004	Y	NA
2099264	2099265	BCG_0981	BCG_0982	pstC2	pstA1	TRUE	0.997	-3.000	0.037	0.004	Y	NA
2099266	2099267	BCG_0983c	BCG_0984c	pknDb	pknDa	TRUE	0.904	11.000	0.000	0.004		NA
2099267	2099268	BCG_0984c	BCG_0985c	pknDa	pstS2	TRUE	0.832	22.000	0.667	1.000	N	NA
2099269	2099270	BCG_0986	BCG_0987	pstBa	pstBb	FALSE	0.276	-25.000	0.000	NA		NA
2099270	2099271	BCG_0987	BCG_0988	pstBb	pstS1	TRUE	0.933	21.000	0.000	0.004	Y	NA
2099271	2099272	BCG_0988	BCG_0989	pstS1	pstC1	TRUE	0.976	60.000	1.000	0.004	Y	NA
2099272	2099273	BCG_0989	BCG_0990	pstC1	pstA2	TRUE	0.998	2.000	0.636	0.004	Y	NA
2099275	2099276	BCG_0992	BCG_0993			TRUE	0.918	-3.000	0.043	1.000	N	NA
2099277	2099278	BCG_0994c	BCG_0995c			FALSE	0.337	85.000	0.182	NA		NA
2099281	2099282	BCG_0998	BCG_0999			TRUE	0.871	6.000	0.082	1.000		NA
2099283	2099284	BCG_1000c	BCG_1001c	pgi		FALSE	0.002	615.000	0.000	NA		NA
2099284	2099285	BCG_1001c	BCG_1002c			FALSE	0.077	116.000	0.000	NA		NA
2099288	2099289	BCG_1005	BCG_1006	sucC	sucD	TRUE	0.988	13.000	0.382	0.001	Y	NA
2099291	2099292	BCG_1008	BCG_1009			FALSE	0.466	40.000	0.218	NA		NA
2099292	2099293	BCG_1009	BCG_1010		purN	FALSE	0.153	116.000	0.044	NA		NA
2099293	2099294	BCG_1010	BCG_1011	purN	purH	TRUE	0.994	-3.000	0.225	1.000	Y	NA
2099294	2099295	BCG_1011	BCG_1012	purH		FALSE	0.093	107.000	0.002	1.000	N	NA
2099295	2099296	BCG_1012	BCG_1013			TRUE	0.945	-7.000	0.645	1.000		NA
2099296	2099297	BCG_1013	BCG_1013A			FALSE	0.223	54.000	0.000	1.000		NA
2099297	2099298	BCG_1013A	BCG_1014			TRUE	0.876	-3.000	0.000	NA		NA
2099298	2099299	BCG_1014	BCG_1015			FALSE	0.043	146.000	0.000	NA		NA
2099300	2099301	BCG_1016c	BCG_1017c	lprP		FALSE	0.023	183.000	0.000	NA		NA
2099301	2099302	BCG_1017c	BCG_1018c			FALSE	0.112	99.000	0.000	NA		NA
2099302	2099303	BCG_1018c	BCG_1019c			FALSE	0.110	100.000	0.000	NA		NA
2099303	2099304	BCG_1019c	BCG_1020c			FALSE	0.175	36.000	0.000	NA		NA
2099305	2099306	BCG_1021	BCG_1022			FALSE	0.219	57.000	0.012	NA		NA
2099306	2099307	BCG_1022	BCG_1023		ctpV	TRUE	0.652	56.000	0.500	NA		NA
2099307	2099308	BCG_1023	BCG_1024	ctpV		TRUE	0.991	-3.000	0.667	NA		NA
2099309	2099310	BCG_1025c	BCG_1026c	echA7	fadE12	TRUE	0.992	0.000	0.203	1.000	Y	NA
2099310	2099311	BCG_1026c	BCG_1027c	fadE12	accA2	TRUE	0.998	-3.000	0.812	1.000	Y	NA
2099311	2099312	BCG_1027c	BCG_1028c	accA2	accD2	TRUE	0.998	6.000	0.875	0.003	Y	NA
2099312	2099313	BCG_1028c	BCG_1029c	accD2	fadE13	TRUE	0.994	3.000	0.548	1.000	Y	NA
2099313	2099314	BCG_1029c	BCG_1030c	fadE13		TRUE	0.989	-3.000	0.562	NA		NA
2099316	2099317	BCG_1032c	BCG_1033c	PE_PGRS17		FALSE	0.005	314.000	0.000	NA		NA
2099320	2099321	BCG_1036	BCG_1037	mprA	mprB	TRUE	0.999	0.000	0.655	0.008	Y	NA
2099321	2099322	BCG_1037	BCG_1038	mprB		TRUE	0.595	44.000	0.424	1.000	N	NA
2099322	2099323	BCG_1038	BCG_1039		moaB2	TRUE	0.976	0.000	0.423	1.000	N	NA
2099325	2099326	BCG_1041	BCG_1042			TRUE	0.958	-7.000	0.210	1.000	Y	NA
2099326	2099327	BCG_1042	BCG_1043			TRUE	0.875	7.000	0.152	1.000		NA
2099328	2099329	BCG_1044c	BCG_1045c	grcC2		FALSE	0.137	61.000	0.000	NA		NA
2099329	2099330	BCG_1045c	BCG_1046c			FALSE	0.216	73.000	0.022	NA		NA
2099330	2099331	BCG_1046c	BCG_1047c			FALSE	0.240	74.000	0.041	NA		NA
2099332	2099333	BCG_1048	BCG_1049	galU	moeA1	FALSE	0.320	77.000	0.196	1.000	N	NA
2099333	2099334	BCG_1049	BCG_1050	moeA1	rimJ	FALSE	0.551	63.000	0.427	1.000	N	NA
2099334	2099335	BCG_1050	BCG_1051	rimJ		FALSE	0.112	161.000	0.183	NA		NA
2099335	5582085	BCG_1051	BCG_t13		tRNA-Ala	FALSE	0.146	51.000	0.000	NA		NA
5582085	2099337	BCG_t13	BCG_1052	tRNA-Ala		FALSE	0.146	51.000	0.000	NA		NA
2099337	2099338	BCG_1052	BCG_1053			TRUE	0.876	-3.000	0.000	NA		NA
2099338	2099339	BCG_1053	BCG_1054			FALSE	0.024	181.000	0.000	NA		NA
2099339	2099340	BCG_1054	BCG_1055			FALSE	0.243	24.000	0.000	NA		NA
2099340	2099341	BCG_1055	BCG_1056			FALSE	0.298	18.000	0.000	NA		NA
2099346	2099347	BCG_1061c	BCG_1062c		pabB	FALSE	0.189	74.000	0.006	NA		NA
2099350	2099351	BCG_1065	BCG_1066	tatD	rpfB	FALSE	0.026	208.000	0.008	NA		NA
2099351	2099352	BCG_1066	BCG_1067	rpfB	ksgA	FALSE	0.469	-27.000	0.008	1.000		NA
2099352	2099353	BCG_1067	BCG_1068	ksgA	ispE	FALSE	0.205	86.000	0.068	1.000	N	NA
2099353	2099354	BCG_1068	BCG_1069	ispE		TRUE	0.876	-3.000	0.000	NA		NA
2099354	2099355	BCG_1069	BCG_1070		pks16	FALSE	0.017	204.000	0.000	NA		NA
2099356	2099357	BCG_1071c	BCG_1072c	pth	rplY	TRUE	0.985	13.000	0.496	0.025	Y	NA
2099357	2099358	BCG_1072c	BCG_1073c	rplY	lpqT	FALSE	0.056	134.000	0.000	NA		NA
2099358	2099359	BCG_1073c	BCG_1074c	lpqT	prsA	FALSE	0.175	36.000	0.000	NA		NA
2099359	2099360	BCG_1074c	BCG_1075c	prsA	glmU	FALSE	0.155	92.000	0.026	1.000	N	NA
2099360	5582086	BCG_1075c	BCG_t14	glmU	tRNA-Gln	FALSE	0.340	16.000	0.000	NA		NA
2099362	2099363	BCG_1076	BCG_1077		mfd	TRUE	0.841	59.000	0.013	0.051	Y	NA
2099363	2099364	BCG_1077	BCG_1078	mfd		TRUE	0.935	0.000	0.026	1.000		NA
2099364	2099365	BCG_1078	BCG_1079		lpqU	FALSE	0.118	88.000	0.000	NA		NA
2099365	2099366	BCG_1079	BCG_1080	lpqU	eno	FALSE	0.063	97.000	0.012	NA	N	NA
2099366	2099367	BCG_1080	BCG_1081	eno		TRUE	0.778	5.000	0.043	1.000	N	NA
2099367	2099368	BCG_1081	BCG_1082			TRUE	0.710	17.000	0.252	NA		NA
2099368	2099369	BCG_1082	BCG_1083			TRUE	0.797	-9.000	0.243	NA		NA
2099370	2099371	BCG_1084c	BCG_1085c	kdpE	kdpD	TRUE	0.997	-3.000	0.429	1.000	Y	NA
2099372	2099373	BCG_1086	BCG_1087	kdpF	kdpA	TRUE	0.991	0.000	0.152	0.001		NA
2099373	2099374	BCG_1087	BCG_1088	kdpA	kdpB	TRUE	0.998	-3.000	0.124	0.001	Y	NA
2099374	2099375	BCG_1088	BCG_1089	kdpB	kdpC	TRUE	0.996	0.000	0.015	0.001	Y	NA
2099376	2099377	BCG_1090c	BCG_1091c	trcS	trcR	TRUE	0.994	8.000	0.556	0.047	Y	NA
2099377	2099378	BCG_1091c	BCG_1092c	trcR		FALSE	0.002	182.000	0.000	NA	N	NA
2099378	2099379	BCG_1092c	BCG_1093c			FALSE	0.131	68.000	0.000	NA		NA
2099379	2099380	BCG_1093c	BCG_1094c			FALSE	0.181	34.000	0.000	NA		NA
2099380	2099381	BCG_1094c	BCG_1095c		esxI	FALSE	0.084	111.000	0.000	NA		NA
2099381	2099382	BCG_1095c	BCG_1096c	esxI	esxJ	FALSE	0.213	27.000	0.000	NA		NA
2099382	2099383	BCG_1096c	BCG_1097c	esxJ	PPE15	FALSE	0.043	146.000	0.000	NA		NA
2099383	2099384	BCG_1097c	BCG_1098c	PPE15	PE8	TRUE	0.701	77.000	0.667	NA		NA
2099384	2099385	BCG_1098c	BCG_1099c	PE8		FALSE	0.002	1196.000	0.000	NA		NA
2099385	2099386	BCG_1099c	BCG_1100c			FALSE	0.257	-31.000	0.000	NA		NA
2099386	2099387	BCG_1100c	BCG_1101c			FALSE	0.007	283.000	0.000	NA		NA
2099388	2099389	BCG_1102	BCG_1103			TRUE	0.876	-3.000	0.000	NA		NA
2099393	2099394	BCG_1107	BCG_1108			FALSE	0.233	48.000	0.000	1.000		NA
2099398	2099399	BCG_1112	BCG_1113			TRUE	0.876	-3.000	0.000	NA		NA
2099399	5582087	BCG_1113	BCG_t15		tRNA-Leu	FALSE	0.251	23.000	0.000	NA		NA
5582087	2099401	BCG_t15	BCG_1114	tRNA-Leu		FALSE	0.033	159.000	0.000	NA		NA
2099401	2099402	BCG_1114	BCG_1115			FALSE	0.002	1004.000	0.000	NA		NA
2099402	2099403	BCG_1115	BCG_1116		fadD14	FALSE	0.242	107.000	0.125	NA		NA
2099403	2099404	BCG_1116	BCG_1117	fadD14		FALSE	0.522	76.000	0.286	1.000		NA
2099404	2099405	BCG_1117	BCG_1118			FALSE	0.501	53.000	0.286	NA		NA
2099405	2099406	BCG_1118	BCG_1119			TRUE	0.610	34.000	0.333	NA		NA
2099406	2099407	BCG_1119	BCG_1120			TRUE	0.935	5.000	0.250	1.000		NA
2099408	2099409	BCG_1121c	BCG_1122c		lpqV	FALSE	0.200	81.000	0.016	NA		NA
2099410	2099411	BCG_1123	BCG_1124			TRUE	0.985	-3.000	0.429	NA		NA
2099412	2099413	BCG_1125c	BCG_1126c	PE_PGRS19	PE_PGRS20	FALSE	0.005	333.000	0.000	NA		NA
2099413	2099414	BCG_1126c	BCG_1127c	PE_PGRS20		FALSE	0.004	362.000	0.000	NA		NA
2099414	2099415	BCG_1127c	BCG_1128c		echA8	TRUE	0.975	-3.000	0.259	NA		NA
2099415	2099416	BCG_1128c	BCG_1129c	echA8	echA9	TRUE	0.976	12.000	0.128	0.007	Y	NA
2099417	2099418	BCG_1130	BCG_1131			FALSE	0.077	116.000	0.000	NA		NA
2099419	2099420	BCG_1132c	BCG_1133c	fadA3		FALSE	0.084	53.000	0.000	1.000	N	NA
2099421	2099422	BCG_1134	BCG_1135	lipU	cbs	FALSE	0.172	57.000	0.017	1.000	N	NA
2099422	2099423	BCG_1135	BCG_1136	cbs	pra	FALSE	0.035	202.000	0.034	NA		NA
2099423	2099424	BCG_1136	BCG_1137	pra	metB	FALSE	0.311	32.000	0.028	NA		NA
2099425	2099426	BCG_1138c	BCG_1139c	greA		FALSE	0.103	186.000	0.250	NA		NA
2099427	2099428	BCG_1140	BCG_1141	mca		TRUE	0.952	-3.000	0.099	NA		NA
2099428	2099429	BCG_1141	BCG_1142			FALSE	0.505	-13.000	0.011	NA		NA
2099431	2099432	BCG_1144	BCG_1145		PE_PGRS21	FALSE	0.025	177.000	0.000	NA		NA
2099432	2099433	BCG_1145	BCG_1146	PE_PGRS21		FALSE	0.025	177.000	0.000	NA		NA
2099433	2099434	BCG_1146	BCG_1147		PE9	FALSE	0.037	153.000	0.000	NA		NA
2099434	2099435	BCG_1147	BCG_1148	PE9	PE10	FALSE	0.212	-121.000	0.000	NA		NA
2099435	2099436	BCG_1148	BCG_1149	PE10	celA2a	FALSE	0.006	386.000	0.000	1.000		NA
2099436	2099437	BCG_1149	BCG_1150	celA2a	celA2b	TRUE	0.842	-22.000	0.000	0.001		NA
2099437	2099438	BCG_1150	BCG_1151	celA2b	PE_PGRS22	FALSE	0.003	415.000	0.000	NA		NA
2099440	2099441	BCG_1153	BCG_1154	glyA1	desA2	FALSE	0.320	105.000	0.143	1.000		NA
2099441	2099442	BCG_1154	BCG_1155	desA2	phoH2	FALSE	0.047	211.000	0.046	1.000		NA
2099442	2099443	BCG_1155	BCG_1156	phoH2		FALSE	0.231	87.000	0.108	1.000	N	NA
2099444	2099445	BCG_1157c	BCG_1158c		fum	TRUE	0.925	-3.000	0.014	NA		NA
2099445	2099446	BCG_1158c	BCG_1159c	fum		FALSE	0.320	31.000	0.071	1.000	N	NA
2099448	2099449	BCG_1161c	BCG_1162c			FALSE	0.011	240.000	0.000	NA		NA
2099449	2099450	BCG_1162c	BCG_1163c			TRUE	0.974	0.000	0.286	1.000		NA
2099451	2099452	BCG_1164	BCG_1165			FALSE	0.005	321.000	0.000	NA		NA
2099453	2099454	BCG_1166c	BCG_1167c		xseB	TRUE	0.562	10.000	0.009	1.000	N	NA
2099454	2099455	BCG_1167c	BCG_1168c	xseB	xseA	TRUE	0.989	-10.000	0.412	0.001	Y	NA
2099455	2099456	BCG_1168c	BCG_1169c	xseA		TRUE	0.931	-3.000	0.024	NA		NA
2099459	2099460	BCG_1172	BCG_1173			FALSE	0.118	88.000	0.000	NA		NA
2099460	2099461	BCG_1173	BCG_1174			TRUE	0.992	-3.000	0.689	NA		NA
2099461	2099462	BCG_1174	BCG_1175			FALSE	0.017	203.000	0.000	NA		NA
2099462	2099463	BCG_1175	BCG_1176			FALSE	0.074	118.000	0.000	NA		NA
2099466	2099467	BCG_1179c	BCG_1180c			FALSE	0.184	33.000	0.000	NA		NA
2099467	2099468	BCG_1180c	BCG_1181c			TRUE	0.985	-3.000	0.000	0.005		NA
2099469	2099470	BCG_1182	BCG_1183	zwf1	gnd2	TRUE	0.862	22.000	0.062	1.000	Y	NA
2099472	2099473	BCG_1185	BCG_1186	ephC		TRUE	0.849	5.000	0.070	NA		NA
2099474	2099475	BCG_1187c	BCG_1188c		ppdK	TRUE	0.992	-3.000	0.750	NA		NA
2099475	2099476	BCG_1188c	BCG_1189c	ppdK		FALSE	0.015	213.000	0.000	NA		NA
2099476	2099477	BCG_1189c	BCG_1190c			FALSE	0.107	102.000	0.000	NA		NA
2099478	2099479	BCG_1191	BCG_1192		gltA1	TRUE	0.975	-3.000	0.216	1.000		NA
2099479	2099480	BCG_1192	BCG_1193	gltA1		FALSE	0.434	12.000	0.000	NA		NA
2099484	2099485	BCG_1197	BCG_1198			FALSE	0.229	50.000	0.000	1.000		NA
2099486	2099487	BCG_1199c	BCG_1200c			FALSE	0.317	17.000	0.000	NA		NA
2099487	2099488	BCG_1200c	BCG_1201c			TRUE	0.971	-3.000	0.176	1.000		NA
2099490	2099491	BCG_1203c	BCG_1204c	echA11	echA10	TRUE	0.625	143.000	0.000	0.007	Y	NA
2099492	2099493	BCG_1205	BCG_1206	mcr		TRUE	0.908	12.000	0.636	1.000	N	NA
2099493	2099494	BCG_1206	BCG_1207		mmpL13	FALSE	0.004	515.000	0.000	1.000		NA
2099494	2099495	BCG_1207	BCG_1208	mmpL13		FALSE	0.180	133.000	0.080	1.000		NA
2099497	2099498	BCG_1210	BCG_1211			FALSE	0.257	-31.000	0.000	NA		NA
2099501	2099502	BCG_1214c	BCG_1215c	omt		TRUE	0.951	-3.000	0.091	NA		NA
2099503	2099504	BCG_1216	BCG_1217			FALSE	0.005	434.000	0.000	1.000		NA
2099505	2099506	BCG_1218c	BCG_1219c			TRUE	0.867	8.000	0.222	NA		NA
2099509	2099510	BCG_1222	BCG_1223	mutT2	narG	FALSE	0.003	308.000	0.000	1.000	N	NA
2099510	2099511	BCG_1223	BCG_1224	narG	narH	TRUE	0.944	39.000	0.227	0.001	Y	NA
2099511	2099512	BCG_1224	BCG_1225	narH	narJ	TRUE	0.920	57.000	0.182	0.002	Y	NA
2099512	2099513	BCG_1225	BCG_1226	narJ	narI	TRUE	0.994	3.000	0.059	0.002	Y	NA
2099513	2099514	BCG_1226	BCG_1227	narI	typA	FALSE	0.256	22.000	0.002	1.000	N	NA
2099514	2099515	BCG_1227	BCG_1228	typA	lpqW	FALSE	0.148	98.000	0.025	1.000	N	NA
2099516	2099517	BCG_1229c	BCG_1230c		PPE17b	FALSE	0.130	72.000	0.000	NA		NA
2099517	2099518	BCG_1230c	BCG_1231c	PPE17b	PPE17a	FALSE	0.240	-46.000	0.000	NA		NA
2099518	2099519	BCG_1231c	BCG_1232c	PPE17a	PE11	FALSE	0.298	18.000	0.000	NA		NA
2099520	2099521	BCG_1233	BCG_1234	mshB		FALSE	0.523	92.000	0.387	NA		NA
2099524	2099525	BCG_1237c	BCG_1238c		fadH	FALSE	0.018	201.000	0.000	NA		NA
2099525	2099526	BCG_1238c	BCG_1239c	fadH		TRUE	0.907	-3.000	0.093	NA	N	NA
2099527	2099528	BCG_1240	BCG_1241	fdxC		FALSE	0.243	33.000	0.029	1.000	N	NA
2099530	2099531	BCG_1243	BCG_1244	pks3	papA3	FALSE	0.466	53.000	0.250	NA		NA
2099531	2099532	BCG_1244	BCG_1245	papA3	mmpL10	TRUE	0.795	67.000	1.000	NA		NA
2099533	2099534	BCG_1246c	BCG_1247c		fadD21	FALSE	0.029	165.000	0.000	NA		NA
2099534	2099535	BCG_1247c	BCG_1248c	fadD21		FALSE	0.213	177.000	0.000	NA	Y	NA
2099536	2099537	BCG_1249	BCG_1250	rocA		TRUE	0.938	0.000	0.181	1.000	N	NA
2099537	2099538	BCG_1250	BCG_1251		sigI	FALSE	0.070	82.000	0.000	1.000	N	NA
2099538	2099539	BCG_1251	BCG_1252	sigI		FALSE	0.192	82.000	0.000	1.000		NA
2099539	2099540	BCG_1252	BCG_1253		fadD36	TRUE	0.579	40.000	0.000	0.045		NA
2099542	2099543	BCG_1255	BCG_1256	PE13	PPE18	FALSE	0.152	47.000	0.000	NA		NA
2099543	2099544	BCG_1256	BCG_1257	PPE18	esxK	FALSE	0.054	135.000	0.000	NA		NA
2099544	2099545	BCG_1257	BCG_1258	esxK	esxL	FALSE	0.146	51.000	0.000	NA		NA
2099550	2099551	BCG_1263c	BCG_1264c			FALSE	0.290	31.000	0.000	1.000		NA
2099552	2099553	BCG_1265	BCG_1266		fadD6	FALSE	0.541	50.000	0.324	NA		NA
2099553	2099554	BCG_1266	BCG_1267	fadD6	folP2	FALSE	0.305	66.000	0.172	1.000	N	NA
2099554	2099555	BCG_1267	BCG_1268	folP2		TRUE	0.957	-3.000	0.136	NA		NA
2099555	2099556	BCG_1268	BCG_1269			FALSE	0.306	39.000	0.045	NA		NA
2099556	2099557	BCG_1269	BCG_1270		tagA	TRUE	0.924	-3.000	0.013	NA		NA
2099557	2099558	BCG_1270	BCG_1271	tagA		FALSE	0.159	108.000	0.021	NA		NA
2099561	2099562	BCG_1274c	BCG_1275c	PE14		FALSE	0.056	134.000	0.000	NA		NA
2099562	2099563	BCG_1275c	BCG_1276c			FALSE	0.486	28.000	0.080	1.000		NA
2099563	2099564	BCG_1276c	BCG_1277c			TRUE	0.657	9.000	0.111	NA	N	NA
2099564	2099565	BCG_1277c	BCG_1278c			TRUE	0.939	-3.000	0.185	NA	N	NA
2099565	2099566	BCG_1278c	BCG_1279c			FALSE	0.552	-10.000	0.000	1.000		NA
2099566	2099567	BCG_1279c	BCG_1280c			FALSE	0.077	142.000	0.000	1.000		NA
2099568	2099569	BCG_1281	BCG_1282	sigE		FALSE	0.140	158.000	0.224	NA		NA
2099569	2099570	BCG_1282	BCG_1283		htrA	TRUE	0.679	69.000	0.607	NA		NA
2099570	2099571	BCG_1283	BCG_1284	htrA	tatB	TRUE	0.935	2.000	0.242	1.000	N	NA
2099572	2099573	BCG_1285c	BCG_1286c			FALSE	0.175	111.000	0.054	NA		NA
2099573	2099574	BCG_1286c	BCG_1287c			TRUE	0.989	-3.000	0.542	NA		NA
2099576	2099577	BCG_1289c	BCG_1290c	mrp		TRUE	0.584	13.000	0.089	1.000	N	NA
2099577	2099578	BCG_1290c	BCG_1291c			FALSE	0.185	125.000	0.139	NA		NA
2099578	2099579	BCG_1291c	BCG_1292c			TRUE	0.993	-3.000	0.806	NA		NA
2099579	2099580	BCG_1292c	BCG_1293c			FALSE	0.135	62.000	0.000	NA		NA
2099581	2099582	BCG_1294	BCG_1295		lpqY	TRUE	0.613	21.000	0.211	NA		NA
2099582	2099583	BCG_1295	BCG_1296	lpqY	sugA	TRUE	0.998	-3.000	0.252	0.022	Y	NA
2099583	2099584	BCG_1296	BCG_1297	sugA	sugB	TRUE	0.997	5.000	0.723	0.022	Y	NA
2099584	2099585	BCG_1297	BCG_1298	sugB	sugC	TRUE	0.991	5.000	0.191	0.022	Y	NA
2099587	2099588	BCG_1300	BCG_1301	mdh		FALSE	0.128	76.000	0.000	NA		NA
2099588	2099589	BCG_1301	BCG_1302			TRUE	0.993	-3.000	0.800	NA		NA
2099592	2099593	BCG_1305c	BCG_1306c			FALSE	0.142	57.000	0.000	NA		NA
2099593	2099594	BCG_1306c	BCG_1307c			TRUE	0.987	-3.000	0.000	NA	Y	NA
2099594	2099595	BCG_1307c	BCG_1308c		kgd	FALSE	0.006	113.000	0.000	NA	N	NA
2099595	2099596	BCG_1308c	BCG_1309c	kgd		FALSE	0.034	193.000	0.013	NA		NA
2099598	2099599	BCG_1311c	BCG_1312c		lprE	FALSE	0.338	56.000	0.133	NA		NA
2099600	2099601	BCG_1313	BCG_1314	deaD		TRUE	0.881	-3.000	0.006	1.000	N	NA
2099602	2099603	BCG_1315c	BCG_1316c			TRUE	0.958	-3.000	0.143	NA		NA
2099604	2099605	BCG_1317	BCG_1318			TRUE	0.672	2.000	0.016	NA	N	NA
2099605	2099606	BCG_1318	BCG_1319			TRUE	0.828	-15.000	0.000	0.009		NA
2099607	2099608	BCG_1320c	BCG_1321c			TRUE	0.873	5.000	0.136	NA		NA
2099609	2099610	BCG_1322	BCG_1323	amiB2		FALSE	0.074	75.000	0.000	1.000	N	NA
2099610	2099611	BCG_1323	BCG_1324			FALSE	0.027	173.000	0.000	NA		NA
2099612	2099613	BCG_1325c	BCG_1326c	pknH	embR	FALSE	0.054	341.000	0.000	1.000	Y	NA
2099613	2099614	BCG_1326c	BCG_1327c	embR		FALSE	0.009	311.000	0.000	1.000		NA
2099614	2099615	BCG_1327c	BCG_1328c			FALSE	0.013	223.000	0.000	NA		NA
2099615	2099616	BCG_1328c	BCG_1329c		lprA	TRUE	0.716	61.000	0.667	NA		NA
2099616	2099617	BCG_1329c	BCG_1330c	lprA		FALSE	0.015	213.000	0.000	NA		NA
2099617	2099618	BCG_1330c	BCG_1331c			FALSE	0.093	108.000	0.000	NA		NA
2099618	2099619	BCG_1331c	BCG_1332c			TRUE	0.999	-3.000	1.000	0.003	Y	NA
2099620	2099621	BCG_1333	BCG_1334	lprB	lprC	TRUE	0.992	-3.000	0.692	NA		NA
2099623	2099624	BCG_1336	BCG_1337			TRUE	0.995	-3.000	0.312	NA	Y	NA
2099624	2099625	BCG_1337	BCG_1338			FALSE	0.182	21.000	0.017	NA	N	NA
2099626	2099627	BCG_1339c	BCG_1340c	oppA	oppD	TRUE	0.962	-7.000	0.242	1.000	Y	NA
2099627	2099628	BCG_1340c	BCG_1341c	oppD	oppC	TRUE	0.996	-3.000	0.303	1.000	Y	NA
2099628	2099629	BCG_1341c	BCG_1342c	oppC	oppB	TRUE	0.999	-3.000	0.846	0.022	Y	NA
2099630	2099631	BCG_1343	BCG_1344	canA	cysD	FALSE	0.244	94.000	0.136	1.000	N	NA
2099631	2099632	BCG_1344	BCG_1345	cysD	cysN	TRUE	0.994	0.000	0.483	0.001	N	NA
2099632	2099633	BCG_1345	BCG_1346	cysN		FALSE	0.172	54.000	0.073	NA	N	NA
2099633	2099634	BCG_1346	BCG_1347			FALSE	0.141	58.000	0.000	NA		NA
2099634	2099635	BCG_1347	BCG_1348			FALSE	0.149	49.000	0.000	NA		NA
2099638	5582088	BCG_1351c	BCG_t16		tRNA-Arg	FALSE	0.004	359.000	0.000	NA		NA
2099640	2099641	BCG_1352	BCG_1353	argS	lysA	TRUE	0.933	-3.000	0.071	1.000	N	NA
2099641	2099642	BCG_1353	BCG_1354	lysA	thrA	TRUE	0.979	4.000	0.071	1.000	Y	NA
2099642	2099643	BCG_1354	BCG_1355	thrA	thrC	TRUE	0.994	-3.000	0.194	1.000	Y	NA
2099643	2099644	BCG_1355	BCG_1356	thrC	thrB	FALSE	0.261	218.000	0.221	1.000	Y	NA
2099644	2099645	BCG_1356	BCG_1357	thrB	rho	FALSE	0.037	257.000	0.000	0.085	N	NA
2099645	2099646	BCG_1357	BCG_1358	rho	rpmE	FALSE	0.085	151.000	0.115	1.000	N	NA
2099646	2099647	BCG_1358	BCG_1359	rpmE	prfA	TRUE	0.720	90.000	0.110	1.000	Y	NA
2099647	2099648	BCG_1359	BCG_1360	prfA	hemK	TRUE	0.992	-3.000	0.069	1.000	Y	NA
2099648	2099649	BCG_1360	BCG_1361	hemK		TRUE	0.961	16.000	0.583	NA	Y	NA
2099649	2099650	BCG_1361	BCG_1362		rfe	FALSE	0.299	84.000	0.248	NA	N	NA
2099650	2099651	BCG_1362	BCG_1363	rfe		FALSE	0.016	257.000	0.000	1.000		NA
2099651	2099652	BCG_1363	BCG_1364		atpB	TRUE	0.720	-7.000	0.021	1.000		NA
2099652	2099653	BCG_1364	BCG_1365	atpB	atpE	TRUE	0.963	49.000	0.557	0.003	Y	NA
2099653	2099654	BCG_1365	BCG_1366	atpE	atpF	TRUE	0.918	31.000	0.012	0.003	Y	NA
2099654	2099655	BCG_1366	BCG_1367	atpF	atpH	TRUE	0.987	7.000	0.008	0.003	Y	NA
2099655	2099656	BCG_1367	BCG_1368	atpH	atpA	TRUE	0.978	45.000	0.864	0.003	Y	NA
2099656	2099657	BCG_1368	BCG_1369	atpA	atpG	TRUE	0.997	7.000	0.846	0.003	Y	NA
2099657	2099658	BCG_1369	BCG_1370	atpG	atpD	TRUE	0.975	40.000	0.724	0.003	Y	NA
2099658	2099659	BCG_1370	BCG_1371	atpD	atpC	TRUE	0.993	14.000	0.837	0.003	Y	NA
2099659	2099660	BCG_1371	BCG_1372	atpC		TRUE	0.768	8.000	0.054	NA		NA
2099661	2099662	BCG_1373c	BCG_1374c			TRUE	0.766	-25.000	0.000	0.009		NA
2099662	2099663	BCG_1374c	BCG_1375c			FALSE	0.049	166.000	0.000	1.000		NA
2099664	5582089	BCG_1376	BCG_r17	murA	16S_rRNA	FALSE	0.008	269.000	0.000	NA		NA
5582089	5582090	BCG_r17	BCG_r18	16S_rRNA	23S_rRNA	FALSE	0.008	276.000	0.000	NA		NA
5582090	5582091	BCG_r18	BCG_r19	23S_rRNA	5S_rRNA	FALSE	0.103	104.000	0.000	NA		NA
2099668	2099669	BCG_1377c	BCG_1378c	ogt	alkA	TRUE	0.998	-3.000	0.093	0.001	Y	NA
2099669	2099670	BCG_1378c	BCG_1379c	alkA		FALSE	0.071	81.000	0.000	1.000	N	NA
2099670	2099671	BCG_1379c	BCG_1380c			TRUE	0.864	70.000	0.000	0.002	Y	NA
2099671	2099672	BCG_1380c	BCG_1381c			TRUE	0.966	13.000	0.000	0.002	Y	NA
2099673	2099674	BCG_1382	BCG_1383			FALSE	0.514	23.000	0.141	NA		NA
2099676	2099677	BCG_1385	BCG_1386	fadA4		FALSE	0.089	130.000	0.035	1.000	N	NA
2099678	2099679	BCG_1387c	BCG_1388c	PE_PGRS24	glgB	FALSE	0.038	152.000	0.000	NA		NA
2099679	2099680	BCG_1388c	BCG_1389c	glgB	glgE	TRUE	0.988	8.000	0.159	0.004	Y	NA
2099682	2099683	BCG_1391c	BCG_1392c	dinG		FALSE	0.395	24.000	0.080	1.000	N	NA
2099684	2099685	BCG_1393	BCG_1394			TRUE	0.872	-40.000	0.823	NA		NA
2099685	2099686	BCG_1394	BCG_1395			TRUE	0.563	17.000	0.093	NA		NA
2099686	2099687	BCG_1395	BCG_1396			TRUE	0.758	8.000	0.044	NA		NA
2099687	2099688	BCG_1396	BCG_1397			FALSE	0.495	22.000	0.093	NA		NA
2099688	2099689	BCG_1397	BCG_1398		cysM	TRUE	0.661	10.000	0.052	1.000	N	NA
2099689	2099690	BCG_1398	BCG_1399	cysM		TRUE	0.695	-9.000	0.032	1.000		NA
2099690	2099691	BCG_1399	BCG_1400		murI	TRUE	0.951	-3.000	0.024	1.000		NA
2099691	2099692	BCG_1400	BCG_1401	murI		FALSE	0.466	27.000	0.054	1.000		NA
2099692	2099693	BCG_1401	BCG_1402		rphA	TRUE	0.598	17.000	0.053	1.000		NA
2099693	2099694	BCG_1402	BCG_1403	rphA		FALSE	0.477	39.000	0.262	1.000	N	NA
2099695	2099696	BCG_1404c	BCG_1405c		lprD	TRUE	0.977	-3.000	0.286	NA		NA
2099697	2099698	BCG_1406	BCG_1407		fadD33	TRUE	0.966	-7.000	0.286	1.000	Y	NA
2099698	2099699	BCG_1407	BCG_1408	fadD33	fadE14	TRUE	0.992	0.000	0.200	1.000	Y	NA
5582092	2099702	BCG_t20	BCG_1410	tRNA-Leu		FALSE	0.011	236.000	0.000	NA		NA
2099702	2099703	BCG_1410	BCG_1411			TRUE	0.999	-3.000	0.686	0.003	Y	NA
2099703	2099704	BCG_1411	BCG_1412		fabG2	FALSE	0.035	129.000	0.000	1.000	N	NA
2099704	2099705	BCG_1412	BCG_1413	fabG2		TRUE	0.876	-3.000	0.000	NA		NA
2099705	2099706	BCG_1413	BCG_1414			FALSE	0.017	203.000	0.000	NA		NA
2099707	2099708	BCG_1415c	BCG_1416c			FALSE	0.174	20.000	0.000	1.000	N	NA
2099708	2099709	BCG_1416c	BCG_1417c		moeY	FALSE	0.413	9.000	0.000	1.000	N	NA
2099709	2099710	BCG_1417c	BCG_1418c	moeY		TRUE	0.966	-3.000	0.200	NA		NA
2099710	2099711	BCG_1418c	BCG_1419c			FALSE	0.003	473.000	0.000	NA		NA
2099712	2099713	BCG_1420	BCG_1421			TRUE	0.569	82.000	0.000	0.005		NA
2099713	2099714	BCG_1421	BCG_1422			FALSE	0.000	423.000	0.000	NA	N	NA
2099715	2099716	BCG_1423c	BCG_1424c	PPE19		FALSE	0.005	315.000	0.000	NA		NA
2099716	2099717	BCG_1424c	BCG_1425c			TRUE	0.876	-3.000	0.000	NA		NA
2099717	2099718	BCG_1425c	BCG_1426c			FALSE	0.006	291.000	0.000	NA		NA
2099718	2099719	BCG_1426c	BCG_1427c			FALSE	0.398	139.000	0.000	1.000	Y	NA
2099722	2099723	BCG_1430	BCG_1431	lprF		FALSE	0.019	196.000	0.000	NA		NA
2099723	2099724	BCG_1431	BCG_1432			FALSE	0.273	-478.000	0.000	1.000		NA
2099724	2099725	BCG_1432	BCG_1433			TRUE	0.909	-3.000	0.028	1.000	N	NA
2099725	2099726	BCG_1433	BCG_1434			TRUE	0.760	6.000	0.000	1.000		NA
2099728	2099729	BCG_1436	BCG_1437			TRUE	0.976	-3.000	0.282	NA		NA
2099730	2099731	BCG_1438c	BCG_1439c			FALSE	0.485	11.000	0.000	NA		NA
2099732	2099733	BCG_1440	BCG_1441	pyrR	pyrB	TRUE	0.995	-3.000	0.247	1.000	Y	NA
2099733	2099734	BCG_1441	BCG_1442	pyrB	pyrC	TRUE	0.997	-3.000	0.452	1.000	Y	NA
2099734	2099735	BCG_1442	BCG_1443	pyrC		TRUE	0.943	-3.000	0.057	NA		NA
2099735	2099736	BCG_1443	BCG_1444		carA	TRUE	0.941	-3.000	0.050	NA		NA
2099736	2099737	BCG_1444	BCG_1445	carA	carB	TRUE	0.998	0.000	0.345	0.001	Y	NA
2099737	2099738	BCG_1445	BCG_1446	carB	pyrF	TRUE	0.992	-3.000	0.075	1.000	Y	NA
2099738	2099739	BCG_1446	BCG_1447	pyrF	PE15	FALSE	0.020	195.000	0.000	NA		NA
2099739	2099740	BCG_1447	BCG_1448	PE15	PPE20	TRUE	0.991	-3.000	0.667	NA		NA
2099740	2099741	BCG_1448	BCG_1449	PPE20	mihF	FALSE	0.006	306.000	0.000	NA		NA
2099741	2099742	BCG_1449	BCG_1450	mihF	gmk	FALSE	0.157	135.000	0.054	1.000		NA
2099742	2099743	BCG_1450	BCG_1451	gmk	rpoZ	TRUE	0.579	66.000	0.471	1.000	N	NA
2099743	2099744	BCG_1451	BCG_1452	rpoZ	dfp	TRUE	0.620	16.000	0.192	1.000	N	NA
2099744	2099745	BCG_1452	BCG_1453	dfp	metK	FALSE	0.547	128.000	0.059	1.000	Y	NA
2099746	2099747	BCG_1454c	BCG_1455c		cyp132	TRUE	0.969	-3.000	0.000	0.062	N	NA
2099749	2099750	BCG_1457c	BCG_1458c	PE_PGRS25		FALSE	0.010	255.000	0.000	NA		NA
2099750	2099751	BCG_1458c	BCG_1459c			TRUE	0.876	-3.000	0.000	NA		NA
2099751	2099752	BCG_1459c	BCG_1460c		lipH	FALSE	0.190	83.000	0.000	1.000		NA
2099752	2099753	BCG_1460c	BCG_1461c	lipH	lipI	TRUE	0.948	25.000	0.250	0.023	Y	NA
2099754	2099755	BCG_1462	BCG_1463		priA	FALSE	0.240	81.000	0.050	NA		NA
2099759	2099760	BCG_1467	BCG_1468	fmt	fmu	TRUE	0.996	-3.000	0.305	1.000	Y	NA
2099760	2099761	BCG_1468	BCG_1469	fmu	rpe	FALSE	0.348	25.000	0.056	1.000	N	NA
2099761	2099762	BCG_1469	BCG_1470	rpe	ribG	TRUE	0.909	-3.000	0.028	1.000	N	NA
2099763	2099764	BCG_1471c	BCG_1472c		lprG	TRUE	0.855	6.000	0.143	NA		NA
2099765	2099766	BCG_1473	BCG_1474	ribC		FALSE	0.015	214.000	0.000	NA		NA
2099766	2099767	BCG_1474	BCG_1475			FALSE	0.419	-10.000	0.000	NA		NA
2099767	2099768	BCG_1475	BCG_1476		ribA2	FALSE	0.100	105.000	0.000	NA		NA
2099768	2099769	BCG_1476	BCG_1477	ribA2	ribH	TRUE	0.968	15.000	0.041	0.002	Y	NA
2099769	2099770	BCG_1477	BCG_1478	ribH		TRUE	0.925	-3.000	0.014	NA		NA
2099770	2099771	BCG_1478	BCG_1479		lprH	FALSE	0.492	25.000	0.143	NA		NA
2099771	2099772	BCG_1479	BCG_1480	lprH		FALSE	0.024	180.000	0.000	NA		NA
2099772	2099773	BCG_1480	BCG_1481		uvrC	FALSE	0.134	64.000	0.000	NA		NA
2099773	2099774	BCG_1481	BCG_1482	uvrC		TRUE	0.949	-3.000	0.073	NA		NA
2099774	2099775	BCG_1482	BCG_1483			TRUE	0.974	-3.000	0.259	NA		NA
2099775	2099776	BCG_1483	BCG_1484		whiA	TRUE	0.987	-3.000	0.470	NA		NA
2099779	2099780	BCG_1487c	BCG_1488c	lipO	fadD12	TRUE	0.998	0.000	0.857	1.000	Y	NA
2099780	2099781	BCG_1488c	BCG_1489c	fadD12		TRUE	0.991	4.000	0.429	1.000	Y	NA
2099782	2099783	BCG_1490	BCG_1491		PE16	FALSE	0.011	240.000	0.000	NA		NA
2099783	2099784	BCG_1491	BCG_1492	PE16		FALSE	0.084	111.000	0.000	NA		NA
2099784	2099785	BCG_1492	BCG_1493			TRUE	0.988	-3.000	0.500	NA		NA
2099785	2099786	BCG_1493	BCG_1494			FALSE	0.030	164.000	0.000	NA		NA
2099786	2099787	BCG_1494	BCG_1495			TRUE	0.837	0.000	0.000	NA		NA
2099789	2099790	BCG_1497	BCG_1498	gap	pgk	TRUE	0.994	3.000	0.055	0.003	Y	NA
2099790	2099791	BCG_1498	BCG_1499	pgk	tpi	TRUE	0.992	-3.000	0.075	1.000	Y	NA
2099796	2099797	BCG_1504c	BCG_1505c			FALSE	0.002	599.000	0.000	NA		NA
2099797	2099798	BCG_1505c	BCG_1506c		devB	FALSE	0.491	17.000	0.038	NA		NA
2099798	2099799	BCG_1506c	BCG_1507c	devB	opcA	TRUE	0.992	-3.000	0.179	NA	Y	NA
2099799	2099800	BCG_1507c	BCG_1508c	opcA	zwf2	TRUE	0.731	53.000	0.104	NA	Y	NA
2099800	2099801	BCG_1508c	BCG_1509c	zwf2	tal	TRUE	0.992	-3.000	0.067	1.000	Y	NA
2099801	2099802	BCG_1509c	BCG_1510c	tal	tkt	TRUE	0.897	17.000	0.090	1.000	Y	NA
2099802	2099803	BCG_1510c	BCG_1511c	tkt	PE_PGRS27	FALSE	0.003	439.000	0.000	NA		NA
2099809	2099810	BCG_1517c	BCG_1518c			FALSE	0.445	112.000	0.022	0.045		NA
2099810	2099811	BCG_1518c	BCG_1519c			TRUE	0.972	-3.000	0.186	1.000		NA
2099811	2099812	BCG_1519c	BCG_1520c			FALSE	0.222	156.000	0.357	NA		NA
2099813	2099814	BCG_1521	BCG_1522			TRUE	0.940	-3.000	0.100	1.000	N	NA
2099814	2099815	BCG_1522	BCG_1523			TRUE	0.993	-3.000	0.266	0.001	N	NA
2099815	2099816	BCG_1523	BCG_1524			TRUE	0.997	-3.000	0.482	1.000	Y	NA
2099816	2099817	BCG_1524	BCG_1525		csd	TRUE	0.883	2.000	0.093	1.000	N	NA
2099817	2099818	BCG_1525	BCG_1526	csd		TRUE	0.967	-3.000	0.249	1.000	N	NA
2099818	2099819	BCG_1526	BCG_1527			FALSE	0.556	-25.000	0.152	NA		NA
2099820	2099821	BCG_1528c	BCG_1529c	fadE15	PE_PGRS29	FALSE	0.324	107.000	0.222	NA		NA
2099822	2099823	BCG_1530	BCG_1531	ctpD	trxA	FALSE	0.190	44.000	0.018	1.000	N	NA
2099823	2099824	BCG_1531	BCG_1532	trxA	trxB1	TRUE	0.974	16.000	0.222	0.003	Y	NA
2099824	2099825	BCG_1532	BCG_1533	trxB1	echA12	TRUE	0.820	22.000	0.636	1.000	N	NA
2099825	2099826	BCG_1533	BCG_1534	echA12		FALSE	0.441	36.000	0.090	1.000		NA
2099826	2099827	BCG_1534	BCG_1535			FALSE	0.334	97.000	0.191	NA		NA
2099828	2099829	BCG_1536c	BCG_1537c		acn	TRUE	0.807	11.000	0.256	1.000	N	NA
2099830	2099831	BCG_1538	BCG_1539			FALSE	0.013	226.000	0.000	NA		NA
2099831	2099832	BCG_1539	BCG_1540			TRUE	0.830	11.000	0.250	NA		NA
2099832	2099833	BCG_1540	BCG_1541		moxR1	FALSE	0.135	139.000	0.120	NA		NA
2099833	2099834	BCG_1541	BCG_1542	moxR1		TRUE	0.994	-3.000	0.920	NA		NA
2099834	2099835	BCG_1542	BCG_1543			TRUE	0.947	11.000	0.760	NA		NA
2099837	2099838	BCG_1545	BCG_1546	fabG1	inhA	TRUE	0.882	19.000	0.078	1.000	Y	NA
2099838	2099839	BCG_1546	BCG_1547	inhA	hemZ	TRUE	0.738	6.000	0.038	1.000	N	NA
2099841	2099842	BCG_1549	BCG_1550			TRUE	0.893	22.000	0.259	NA	Y	NA
2099842	2099843	BCG_1550	BCG_1551			TRUE	0.720	10.000	0.049	NA		NA
2099843	2099844	BCG_1551	BCG_1552			FALSE	0.181	34.000	0.000	NA		NA
2099844	2099845	BCG_1552	BCG_1553			FALSE	0.040	150.000	0.000	NA		NA
2099847	2099848	BCG_1555	BCG_1556	mutA	mutB	TRUE	0.996	1.000	0.115	0.001	Y	NA
2099848	2099849	BCG_1556	BCG_1557	mutB		FALSE	0.379	14.000	0.000	NA		NA
2099849	2099850	BCG_1557	BCG_1558			TRUE	0.876	-3.000	0.000	NA		NA
2099850	2099851	BCG_1558	BCG_1559			TRUE	0.793	-3.000	0.000	1.000	N	NA
2099851	2099852	BCG_1559	BCG_1560		lipL	FALSE	0.163	53.000	0.011	1.000	N	NA
2099853	2099854	BCG_1561c	BCG_1562c			FALSE	0.015	214.000	0.000	NA		NA
2099855	2099856	BCG_1563	BCG_1564			FALSE	0.155	45.000	0.000	NA		NA
2099856	2099857	BCG_1564	BCG_1565			TRUE	0.596	12.000	0.167	NA	N	NA
2099857	2099858	BCG_1565	BCG_1566			FALSE	0.042	213.000	0.105	NA		NA
2099859	2099860	BCG_1567c	BCG_1568c			FALSE	0.132	137.000	0.027	1.000		NA
2099861	2099862	BCG_1569	BCG_1570			TRUE	0.566	9.000	0.000	NA		NA
2099862	2099863	BCG_1570	BCG_1571			FALSE	0.062	130.000	0.000	NA		NA
2099863	2099864	BCG_1571	BCG_1572			FALSE	0.222	26.000	0.000	NA		NA
2099864	2099865	BCG_1572	BCG_1573		fadD25	FALSE	0.001	234.000	0.000	NA	N	NA
2099867	2099868	BCG_1575	BCG_1576			FALSE	0.118	30.000	0.000	1.000	N	NA
2099868	2099869	BCG_1576	BCG_1577		wbbL2	FALSE	0.152	47.000	0.000	NA		NA
2099870	2099871	BCG_1578c	BCG_1579c		pks5	FALSE	0.154	23.000	0.000	1.000	N	NA
2099871	2099872	BCG_1579c	BCG_1580c	pks5	papA4	FALSE	0.002	544.000	0.000	NA		NA
2099873	2099874	BCG_1581	BCG_1582	fadD24	adh	FALSE	0.042	117.000	0.000	1.000	N	NA
2099874	2099875	BCG_1582	BCG_1583	adh		TRUE	0.978	-3.000	0.300	NA		NA
2099877	2099878	BCG_1585	BCG_1586			TRUE	0.924	-3.000	0.000	1.000		NA
2099878	2099879	BCG_1586	BCG_1587			FALSE	0.002	565.000	0.000	NA		NA
2099879	2099880	BCG_1587	BCG_1588		ileS	FALSE	0.006	307.000	0.000	NA		NA
2099880	2099881	BCG_1588	BCG_1589	ileS	dinX	FALSE	0.019	212.000	0.014	1.000	N	NA
2099883	2099884	BCG_1591	BCG_1592	lspA		TRUE	0.656	-7.000	0.073	1.000	N	NA
2099885	2099886	BCG_1593c	BCG_1594c	lprI	glbN	FALSE	0.273	55.000	0.050	NA		NA
2099887	2099888	BCG_1595	BCG_1596			TRUE	0.689	5.000	0.000	NA		NA
2099888	2099889	BCG_1596	BCG_1597			TRUE	0.837	0.000	0.000	NA		NA
2099889	2099890	BCG_1597	BCG_1598			FALSE	0.261	22.000	0.000	NA		NA
2099890	2099891	BCG_1598	BCG_1599			FALSE	0.149	49.000	0.000	NA		NA
2099891	2099892	BCG_1599	BCG_1600		dnaE1	FALSE	0.186	68.000	0.003	NA		NA
2099894	2099895	BCG_1602	BCG_1603	fadD11	plsB1	TRUE	0.975	14.000	0.333	0.100	Y	NA
2099895	2099896	BCG_1603	BCG_1604	plsB1	frdA	FALSE	0.002	370.000	0.000	1.000	N	NA
2099896	2099897	BCG_1604	BCG_1605	frdA	frdBC	TRUE	0.997	3.000	0.470	0.003	Y	NA
2099897	2099898	BCG_1605	BCG_1606	frdBC	frdD	TRUE	0.996	-3.000	0.000	0.003	Y	NA
2099898	2099899	BCG_1606	BCG_1607	frdD		FALSE	0.076	68.000	0.000	1.000	N	NA
2099899	2099900	BCG_1607	BCG_1608		mmpS6	FALSE	0.327	139.000	0.429	NA		NA
2099900	2099901	BCG_1608	BCG_1609	mmpS6	mmpL6	TRUE	0.992	-3.000	0.750	NA		NA
2099901	2099902	BCG_1609	BCG_1610	mmpL6		FALSE	0.535	10.000	0.000	NA		NA
2099902	2099903	BCG_1610	BCG_1611		ilvA	FALSE	0.305	35.000	0.033	NA		NA
2099903	2099904	BCG_1611	BCG_1612	ilvA		FALSE	0.014	38.000	0.000	NA	N	NA
2099904	2099905	BCG_1612	BCG_1613			TRUE	0.648	6.000	0.000	NA		NA
2099906	2099907	BCG_1614c	BCG_1615c	treZb	treZa	TRUE	0.986	-3.000	0.000	0.004		NA
2099907	2099908	BCG_1615c	BCG_1616c	treZa	treY	TRUE	0.905	-7.000	0.000	0.004		NA
2099908	2099909	BCG_1616c	BCG_1617c	treY	treX	TRUE	0.992	4.000	0.061	0.004	Y	NA
2099909	2099910	BCG_1617c	BCG_1618c	treX		FALSE	0.286	39.000	0.073	1.000	N	NA
2099910	2099911	BCG_1618c	BCG_1619c			FALSE	0.427	99.000	0.400	NA	N	NA
2099911	2099912	BCG_1619c	BCG_1620c			FALSE	0.011	240.000	0.000	NA		NA
2099913	2099914	BCG_1621	BCG_1622	bioA	bioF1	TRUE	0.998	-3.000	0.033	0.001	Y	NA
2099914	2099915	BCG_1622	BCG_1623	bioF1	bioD	TRUE	0.998	-3.000	0.214	0.001	Y	NA
2099915	2099916	BCG_1623	BCG_1624	bioD		TRUE	0.938	0.000	0.036	1.000		NA
2099917	2099918	BCG_1625c	BCG_1626c			FALSE	0.198	-229.000	0.000	NA		NA
2099919	2099920	BCG_1627	BCG_1628	bioB		TRUE	0.893	1.000	0.041	NA		NA
2099920	2099921	BCG_1628	BCG_1629			TRUE	0.982	-3.000	0.361	NA		NA
2099922	2099923	BCG_1630c	BCG_1631c			FALSE	0.050	257.000	0.273	NA		NA
2099924	2099925	BCG_1632	BCG_1633	nadA	nadB	TRUE	0.997	0.000	0.210	0.003	Y	NA
2099925	2099926	BCG_1633	BCG_1634	nadB	nadC	TRUE	0.997	0.000	0.223	0.003	Y	NA
2099926	2099927	BCG_1634	BCG_1635	nadC		FALSE	0.231	49.000	0.000	1.000		NA
2099929	2099930	BCG_1637	BCG_1638	hisD	hisC1	TRUE	0.998	-3.000	0.112	0.003	Y	NA
2099930	2099931	BCG_1638	BCG_1639	hisC1	hisB	TRUE	0.999	-3.000	0.341	0.003	Y	NA
2099931	2099932	BCG_1639	BCG_1640	hisB	hisH	TRUE	0.997	-3.000	0.046	0.003	Y	NA
2099932	2099933	BCG_1640	BCG_1641	hisH	hisA	TRUE	0.993	10.000	0.491	0.003	Y	NA
2099933	2099934	BCG_1641	BCG_1642	hisA	impA	TRUE	0.868	8.000	0.266	1.000	N	NA
2099934	2099935	BCG_1642	BCG_1643	impA	hisF	TRUE	0.820	2.000	0.021	1.000	N	NA
2099935	2099936	BCG_1643	BCG_1644	hisF	hisI	TRUE	0.999	-3.000	0.430	0.003	Y	NA
2099936	2099937	BCG_1644	BCG_1645	hisI	chaA	FALSE	0.023	181.000	0.002	1.000	N	NA
2099939	2099940	BCG_1647	BCG_1648	trpE		TRUE	0.924	-10.000	0.690	NA		NA
2099940	2099941	BCG_1648	BCG_1649		trpC	FALSE	0.254	90.000	0.070	NA		NA
2099941	2099942	BCG_1649	BCG_1650	trpC	trpB	TRUE	0.903	69.000	0.070	0.001	Y	NA
2099942	2099943	BCG_1650	BCG_1651	trpB	trpA	TRUE	0.997	0.000	0.153	0.001	Y	NA
2099943	2099944	BCG_1651	BCG_1652	trpA	lgt	TRUE	0.854	0.000	0.011	1.000	N	NA
2099944	2099945	BCG_1652	BCG_1653	lgt		FALSE	0.002	676.000	0.000	NA		NA
2099945	2099946	BCG_1653	BCG_1654			TRUE	0.677	-10.000	0.111	NA		NA
2099946	2099947	BCG_1654	BCG_1655		pykA	FALSE	0.273	108.000	0.083	1.000		NA
2099947	2099948	BCG_1655	BCG_1656	pykA	tesB1	TRUE	0.905	8.000	0.361	1.000	N	NA
2099948	2099949	BCG_1656	BCG_1657	tesB1		FALSE	0.416	58.000	0.214	NA		NA
2099950	2099951	BCG_1658c	BCG_1659c	cydC	cydD	TRUE	0.999	-3.000	0.631	0.003	Y	NA
2099951	2099952	BCG_1659c	BCG_1660c	cydD	cydB	TRUE	0.735	87.000	0.151	1.000	Y	NA
2099952	2099953	BCG_1660c	BCG_1661c	cydB	cydA	TRUE	0.979	30.000	0.925	0.044	Y	NA
2099953	2099954	BCG_1661c	BCG_1662c	cydA		FALSE	0.208	111.000	0.104	NA		NA
2099954	2099955	BCG_1662c	BCG_1663c		cya	FALSE	0.481	29.000	0.176	NA		NA
2099955	5582093	BCG_1663c	BCG_t21	cya	tRNA-Leu	FALSE	0.044	145.000	0.000	NA		NA
2099958	2099959	BCG_1665c	BCG_1666c			TRUE	0.994	-3.000	0.850	NA		NA
2099960	2099961	BCG_1667	BCG_1668	polA	rpsA	FALSE	0.031	163.000	0.005	1.000	N	NA
2099961	2099962	BCG_1668	BCG_1669	rpsA	coaE	FALSE	0.276	26.000	0.024	1.000	N	NA
2099964	2099965	BCG_1671	BCG_1672	uvrB		TRUE	0.944	-3.000	0.006	1.000		NA
2099970	2099971	BCG_1677c	BCG_1678c			FALSE	0.340	16.000	0.000	NA		NA
2099971	2099972	BCG_1678c	BCG_1679c		lysX	FALSE	0.277	59.000	0.057	NA		NA
2099973	2099974	BCG_1680	BCG_1681	infC	rpmI	TRUE	0.915	50.000	0.652	1.000	Y	NA
2099974	2099975	BCG_1681	BCG_1682	rpmI	rplT	TRUE	0.970	62.000	0.928	0.015	Y	NA
2099975	2099976	BCG_1682	BCG_1683	rplT	tsnR	TRUE	0.908	33.000	0.057	0.012	Y	NA
2099978	2099979	BCG_1685	BCG_1686	PE17		FALSE	0.317	78.000	0.143	NA		NA
2099979	2099980	BCG_1686	BCG_1687			TRUE	0.875	7.000	0.214	NA		NA
2099980	2099981	BCG_1687	BCG_1688		pheS	FALSE	0.028	196.000	0.002	NA		NA
2099981	2099982	BCG_1688	BCG_1689	pheS	pheT	TRUE	0.999	0.000	0.574	0.001	Y	NA
2099984	2099985	BCG_1691	BCG_1692	argC	argJ	TRUE	0.999	-3.000	0.303	0.002	Y	NA
2099985	2099986	BCG_1692	BCG_1693	argJ	argB	TRUE	0.998	-3.000	0.239	0.002	Y	NA
2099986	2099987	BCG_1693	BCG_1694	argB	argD	TRUE	0.993	-3.000	0.105	1.000	Y	NA
2099987	2099988	BCG_1694	BCG_1695	argD	argF	TRUE	0.993	-3.000	0.091	1.000	Y	NA
2099988	2099989	BCG_1695	BCG_1696	argF	argR	TRUE	0.937	-3.000	0.088	1.000	N	NA
2099989	2099990	BCG_1696	BCG_1697	argR	argG	TRUE	0.691	9.000	0.054	1.000	N	NA
2099990	2099991	BCG_1697	BCG_1698	argG	argH	TRUE	0.806	80.000	0.278	1.000	Y	NA
2099991	2099992	BCG_1698	BCG_1699	argH	pks10	FALSE	0.090	109.000	0.003	1.000	N	NA
2099992	2099993	BCG_1699	BCG_1700	pks10	pks7	TRUE	0.967	83.000	1.000	0.018	Y	NA
2099993	2099994	BCG_1700	BCG_1701	pks7	pks8	TRUE	0.989	20.000	1.000	0.008	Y	NA
2099994	2099995	BCG_1701	BCG_1702	pks8	pks17	TRUE	0.994	0.000	0.000	0.009	Y	NA
2099995	2099996	BCG_1702	BCG_1703	pks17	pks9	TRUE	0.985	6.000	0.000	0.005	Y	NA
2099996	2099997	BCG_1703	BCG_1704	pks9	pks11	TRUE	0.877	147.000	0.750	0.018	Y	NA
2099998	2099999	BCG_1705c	BCG_1706c	cyp139		TRUE	0.576	15.000	0.008	1.000		NA
2100000	2100001	BCG_1707	BCG_1708			FALSE	0.184	33.000	0.000	NA		NA
2100001	2100002	BCG_1708	BCG_1709			TRUE	0.590	8.000	0.000	NA		NA
2100003	2100004	BCG_1710c	BCG_1711c			FALSE	0.009	93.000	0.000	NA	N	NA
2100004	2100005	BCG_1711c	BCG_1712c			FALSE	0.018	28.000	0.000	NA	N	NA
2100005	2100006	BCG_1712c	BCG_1713c			FALSE	0.024	325.000	0.000	0.027	N	NA
2100007	2100008	BCG_1714	BCG_1715		dsbF	TRUE	0.987	-3.000	0.000	0.003		NA
2100008	2100009	BCG_1715	BCG_1716	dsbF		FALSE	0.108	101.000	0.000	NA		NA
2100009	2100010	BCG_1716	BCG_1717		fadE16	TRUE	0.914	0.000	0.037	NA		NA
2100010	2100011	BCG_1717	BCG_1718	fadE16		TRUE	0.782	9.000	0.222	NA	N	NA
2100011	2100012	BCG_1718	BCG_1719		moeX	TRUE	0.940	-3.000	0.047	NA		NA
2100012	2100013	BCG_1719	BCG_1720	moeX		FALSE	0.032	161.000	0.000	NA		NA
2100013	2100014	BCG_1720	BCG_1721			FALSE	0.014	218.000	0.000	NA		NA
2100014	2100015	BCG_1721	BCG_1722			TRUE	0.620	-7.000	0.013	NA		NA
2100016	2100017	BCG_1723c	BCG_1724c			TRUE	0.973	2.000	0.400	1.000		NA
2100017	2100018	BCG_1724c	BCG_1725c			TRUE	0.850	72.000	0.089	0.081	Y	NA
2100019	2100020	BCG_1726	BCG_1727		tyrS	TRUE	0.593	12.000	0.067	1.000	N	NA
2100020	2100021	BCG_1727	BCG_1728	tyrS	lprJ	FALSE	0.002	651.000	0.000	NA		NA
2100021	2100022	BCG_1728	BCG_1729	lprJ		FALSE	0.167	39.000	0.000	NA		NA
2100022	2100023	BCG_1729	BCG_1730			TRUE	0.990	-3.000	0.500	1.000		NA
2100023	2100024	BCG_1730	BCG_1731			TRUE	0.963	-3.000	0.083	1.000		NA
2100024	2100025	BCG_1731	BCG_1732		tlyA	TRUE	0.787	8.000	0.014	1.000		NA
2100025	2100026	BCG_1732	BCG_1733	tlyA	ppnK	TRUE	0.923	0.000	0.120	1.000	N	NA
2100026	2100027	BCG_1733	BCG_1734	ppnK	recN	TRUE	0.568	14.000	0.094	1.000	N	NA
2100027	2100028	BCG_1734	BCG_1735	recN		FALSE	0.538	96.000	0.049	0.081		NA
2100028	2100029	BCG_1735	BCG_1736			TRUE	0.875	22.000	0.798	NA		NA
2100029	2100030	BCG_1736	BCG_1737		pyrG	FALSE	0.081	140.000	0.014	NA		NA
2100030	2100031	BCG_1737	BCG_1738	pyrG		TRUE	0.757	-7.000	0.055	1.000		NA
2100031	2100032	BCG_1738	BCG_1739			TRUE	0.960	-3.000	0.063	1.000		NA
2100033	2100034	BCG_1740c	BCG_1741c			FALSE	0.002	555.000	0.000	NA		NA
2100034	2100035	BCG_1741c	BCG_1742c		cycA	FALSE	0.208	65.000	0.000	1.000		NA
2100035	2100036	BCG_1742c	BCG_1743c	cycA	PPE22	FALSE	0.014	41.000	0.000	NA	N	NA
2100036	2100037	BCG_1743c	BCG_1744c	PPE22	PPE23	TRUE	0.674	40.000	0.000	NA	Y	NA
2100037	2100038	BCG_1744c	BCG_1745c	PPE23		FALSE	0.002	604.000	0.000	NA		NA
2100039	2100040	BCG_1746	BCG_1747			FALSE	0.187	18.000	0.000	1.000	N	NA
2100040	2100041	BCG_1747	BCG_1748			TRUE	0.946	-3.000	0.065	NA		NA
2100041	2100042	BCG_1748	BCG_1749			TRUE	0.989	-3.000	0.570	NA		NA
2100042	2100043	BCG_1749	BCG_1750			TRUE	0.952	-3.000	0.224	NA	N	NA
2100043	2100044	BCG_1750	BCG_1751		cmk	TRUE	0.918	-3.000	0.042	1.000	N	NA
2100044	2100045	BCG_1751	BCG_1752	cmk	engA	TRUE	0.988	-3.000	0.060	0.014		NA
2100045	2100046	BCG_1752	BCG_1753	engA		FALSE	0.045	174.000	0.000	1.000		NA
2100046	2100047	BCG_1753	BCG_1754		fadB3	TRUE	0.938	-6.000	0.000	1.000	Y	NA
2100047	2100048	BCG_1754	BCG_1755	fadB3		TRUE	0.897	3.000	0.105	NA		NA
2100048	2100049	BCG_1755	BCG_1756			TRUE	0.837	0.000	0.000	NA		NA
2100049	2100050	BCG_1756	BCG_1757			FALSE	0.145	53.000	0.000	NA		NA
2100050	2100051	BCG_1757	BCG_1758			FALSE	0.027	208.000	0.000	1.000		NA
2100051	5582094	BCG_1758	BCG_t22		tRNA-Pro	FALSE	0.020	193.000	0.000	NA		NA
2100053	2100054	BCG_1759c	BCG_1760c			TRUE	0.961	-3.000	0.167	NA		NA
2100055	2100056	BCG_1761	BCG_1762			TRUE	0.943	-3.000	0.121	1.000	N	NA
2100057	2100058	BCG_1763c	BCG_1764c			FALSE	0.419	-10.000	0.000	NA		NA
2100059	2100060	BCG_1765	BCG_1766			FALSE	0.184	33.000	0.000	NA		NA
2100061	2100062	BCG_1767c	BCG_1768c			TRUE	0.876	-3.000	0.000	NA		NA
2100062	2100063	BCG_1768c	BCG_1769c			FALSE	0.011	66.000	0.000	NA	N	NA
2100065	2100066	BCG_1771c	BCG_1772c			FALSE	0.134	64.000	0.000	NA		NA
2100066	2100067	BCG_1772c	BCG_1773c			FALSE	0.007	287.000	0.000	NA		NA
2100067	2100068	BCG_1773c	BCG_1774c			FALSE	0.013	275.000	0.000	1.000		NA
2100068	2100069	BCG_1774c	BCG_1775c		narX	FALSE	0.005	440.000	0.000	1.000		NA
2100069	2100070	BCG_1775c	BCG_1776c	narX	narK2	TRUE	0.793	-3.000	0.000	1.000	N	NA
2100073	2100074	BCG_1779	BCG_1780			TRUE	0.837	0.000	0.000	NA		NA
2100074	2100075	BCG_1780	BCG_1781			FALSE	0.124	81.000	0.000	NA		NA
2100075	2100076	BCG_1781	BCG_1782		pknE	FALSE	0.116	94.000	0.000	NA		NA
2100077	2100078	BCG_1783c	BCG_1784c		idi	FALSE	0.130	71.000	0.000	NA		NA
2100079	2100080	BCG_1785	BCG_1786	pknF		FALSE	0.394	62.000	0.000	0.081	N	NA
2100080	2100081	BCG_1786	BCG_1787			FALSE	0.004	373.000	0.000	NA		NA
2100082	2100083	BCG_1788c	BCG_1789c		fadD1	FALSE	0.120	84.000	0.000	NA		NA
2100084	2100085	BCG_1790	BCG_1791			FALSE	0.066	127.000	0.000	NA		NA
2100086	2100087	BCG_1792c	BCG_1793c	PPE24		FALSE	0.017	204.000	0.000	NA		NA
2100087	2100088	BCG_1793c	BCG_1794c		plcD	FALSE	0.023	184.000	0.000	NA		NA
2100088	2100089	BCG_1794c	BCG_1795c	plcD		FALSE	0.462	129.000	0.000	1.000	Y	NA
2100090	2100091	BCG_1796	BCG_1797		mmpL14	FALSE	0.031	201.000	0.000	1.000		NA
2100091	2100092	BCG_1797	BCG_1798	mmpL14	cut1	FALSE	0.009	321.000	0.000	1.000		NA
2100093	2100094	BCG_1799c	BCG_1800c	wag22b	wag22a	TRUE	0.876	-3.000	0.000	NA		NA
2100096	2100097	BCG_1802c	BCG_1803c			TRUE	0.992	0.000	1.000	NA		NA
2100097	2100098	BCG_1803c	BCG_1804c			FALSE	0.049	140.000	0.000	NA		NA
2100098	2100099	BCG_1804c	BCG_1805c			FALSE	0.113	98.000	0.000	NA		NA
2100099	2100100	BCG_1805c	BCG_1806c			FALSE	0.032	161.000	0.000	NA		NA
2100101	2100102	BCG_1807	BCG_1808			TRUE	0.932	0.000	0.080	NA		NA
2100105	2100106	BCG_1811c	BCG_1812c			FALSE	0.036	156.000	0.000	NA		NA
2100109	2100110	BCG_1815	BCG_1816			TRUE	0.995	-3.000	1.000	NA		NA
2100112	2100113	BCG_1818	BCG_1819		PPE25	FALSE	0.001	270.000	0.000	NA	N	NA
2100113	2100114	BCG_1819	BCG_1820	PPE25	PE18	FALSE	0.126	79.000	0.000	NA		NA
2100114	2100115	BCG_1820	BCG_1821	PE18	PPE26	TRUE	0.907	14.000	0.667	NA		NA
2100115	2100116	BCG_1821	BCG_1822	PPE26	PPE27	FALSE	0.029	454.000	0.000	NA	Y	NA
2100116	2100117	BCG_1822	BCG_1823	PPE27	PE19	FALSE	0.003	427.000	0.000	NA		NA
2100117	2100118	BCG_1823	BCG_1824	PE19	esxM	FALSE	0.044	144.000	0.000	NA		NA
2100118	2100119	BCG_1824	BCG_1825	esxM	esxN	TRUE	0.732	51.000	0.667	NA		NA
2100119	2100120	BCG_1825	BCG_1826	esxN		FALSE	0.555	88.000	0.429	NA		NA
2100120	2100121	BCG_1826	BCG_1827			FALSE	0.008	272.000	0.000	NA		NA
2100121	2100122	BCG_1827	BCG_1828			TRUE	0.915	-22.000	1.000	NA		NA
2100122	2100123	BCG_1828	BCG_1829			TRUE	0.995	-3.000	1.000	NA		NA
2100123	2100124	BCG_1829	BCG_1830			TRUE	0.991	-3.000	0.667	NA		NA
2100124	2100125	BCG_1830	BCG_1831		lppT	FALSE	0.002	627.000	0.000	NA		NA
2100125	2100126	BCG_1831	BCG_1832	lppT	PPE28	FALSE	0.105	103.000	0.000	NA		NA
2100126	2100127	BCG_1832	BCG_1833	PPE28	PPE29	FALSE	0.023	581.000	0.000	NA	Y	NA
2100127	2100128	BCG_1833	BCG_1834	PPE29	PPE30	FALSE	0.485	112.000	0.000	NA	Y	NA
2100129	2100130	BCG_1835c	BCG_1836c	PE_PGRS32b	PE_PGRS32a	FALSE	0.181	34.000	0.000	NA		NA
2100130	2100131	BCG_1836c	BCG_1837c	PE_PGRS32a		FALSE	0.024	181.000	0.000	NA		NA
2100131	2100132	BCG_1837c	BCG_1838c			FALSE	0.005	338.000	0.000	NA		NA
2100133	2100134	BCG_1839	BCG_1840	PE20	PPE31	FALSE	0.213	27.000	0.000	NA		NA
2100134	2100135	BCG_1840	BCG_1841	PPE31	PPE32	FALSE	0.050	324.000	0.000	NA	Y	NA
2100135	2100136	BCG_1841	BCG_1842	PPE32	PPE33a	FALSE	0.499	132.000	0.667	NA		NA
2100136	2100137	BCG_1842	BCG_1843	PPE33a	PPE33b	TRUE	0.797	1.000	0.000	NA		NA
2100137	2100138	BCG_1843	BCG_1844	PPE33b		FALSE	0.011	239.000	0.000	NA		NA
2100138	2100139	BCG_1844	BCG_1845			FALSE	0.063	154.000	0.014	NA		NA
2100140	2100141	BCG_1846c	BCG_1847c			FALSE	0.005	322.000	0.000	NA		NA
2100142	2100143	BCG_1848	BCG_1849	erg3		FALSE	0.195	105.000	0.045	NA		NA
2100143	2100144	BCG_1849	BCG_1850			FALSE	0.210	63.000	0.000	1.000		NA
2100144	2100145	BCG_1850	BCG_1851			FALSE	0.002	558.000	0.000	NA		NA
2100145	2100146	BCG_1851	BCG_1852			TRUE	0.876	-3.000	0.000	NA		NA
2100147	2100148	BCG_1853c	BCG_1854c	PE_PGRS33		FALSE	0.054	135.000	0.000	NA		NA
2100149	2100150	BCG_1855	BCG_1856	ilvG	secA2	FALSE	0.536	15.000	0.082	1.000	N	NA
2100150	2100151	BCG_1856	BCG_1857	secA2	pgsA2	FALSE	0.029	197.000	0.038	1.000	N	NA
2100151	2100152	BCG_1857	BCG_1858	pgsA2		TRUE	0.737	-7.000	0.114	NA		NA
2100152	2100153	BCG_1858	BCG_1859			TRUE	0.692	29.000	0.409	NA		NA
2100153	2100154	BCG_1859	BCG_1860			TRUE	0.803	17.000	0.409	NA		NA
2100154	2100155	BCG_1860	BCG_1861		gcvH	TRUE	0.661	38.000	0.434	NA		NA
2100155	2100156	BCG_1861	BCG_1862	gcvH	cfp17	FALSE	0.033	240.000	0.242	NA	N	NA
2100156	2100157	BCG_1862	BCG_1863	cfp17		TRUE	0.989	-3.000	0.707	NA	N	NA
2100157	2100158	BCG_1863	BCG_1864			FALSE	0.194	119.000	0.133	NA		NA
2100158	2100159	BCG_1864	BCG_1865			FALSE	0.009	348.000	0.043	NA		NA
2100159	2100160	BCG_1865	BCG_1866			FALSE	0.249	53.000	0.028	NA		NA
2100160	2100161	BCG_1866	BCG_1867		gcvB	FALSE	0.207	49.000	0.002	NA		NA
2100164	2100165	BCG_1870c	BCG_1871c			FALSE	0.340	16.000	0.000	NA		NA
2100165	2100166	BCG_1871c	BCG_1872c		glcB	FALSE	0.173	120.000	0.089	NA		NA
2100166	2100167	BCG_1872c	BCG_1873c	glcB		FALSE	0.008	276.000	0.000	NA		NA
2100167	2100168	BCG_1873c	BCG_1874c			TRUE	0.876	-3.000	0.000	NA		NA
2100168	2100169	BCG_1874c	BCG_1875c		PE_PGRS34b	FALSE	0.139	59.000	0.000	NA		NA
2100169	2100170	BCG_1875c	BCG_1876c	PE_PGRS34b	PE_PGRS34a	FALSE	0.188	-318.000	0.000	NA		NA
2100170	2100171	BCG_1876c	BCG_1877c	PE_PGRS34a		FALSE	0.030	163.000	0.000	NA		NA
2100171	2100172	BCG_1877c	BCG_1878c			TRUE	0.996	0.000	0.815	0.042		NA
2100172	2100173	BCG_1878c	BCG_1879c		guaB1	FALSE	0.189	174.000	0.038	0.096		NA
2100173	2100174	BCG_1879c	BCG_1880c	guaB1	gnd1	FALSE	0.221	-634.000	0.023	1.000	N	NA
2100174	2100175	BCG_1880c	BCG_1881c	gnd1		FALSE	0.151	90.000	0.023	1.000	N	NA
2100175	2100176	BCG_1881c	BCG_1882c			TRUE	0.917	15.000	0.850	1.000	N	NA
2100177	2100178	BCG_1883	BCG_1884		ureA	FALSE	0.326	49.000	0.222	NA	N	NA
2100178	2100179	BCG_1884	BCG_1885	ureA	ureB	TRUE	0.998	-3.000	0.052	0.001	Y	NA
2100179	2100180	BCG_1885	BCG_1886	ureB	ureC	TRUE	0.999	0.000	0.486	0.001	Y	NA
2100180	2100181	BCG_1886	BCG_1887	ureC	ureF	TRUE	0.984	0.000	0.061	0.002	N	NA
2100181	2100182	BCG_1887	BCG_1888	ureF	ureG	TRUE	0.992	11.000	0.439	0.002	Y	NA
2100182	2100183	BCG_1888	BCG_1889	ureG	ureD	TRUE	0.955	8.000	0.032	0.002		NA
2100184	2100185	BCG_1890c	BCG_1891c	ndh		TRUE	0.707	141.000	0.500	1.000	Y	NA
2100185	2100186	BCG_1891c	BCG_1892c			TRUE	0.694	39.000	0.571	1.000	N	NA
2100187	2100188	BCG_1893	BCG_1894	modA	modB	TRUE	0.998	3.000	0.578	0.001	Y	NA
2100188	2100189	BCG_1894	BCG_1895	modB	modC	TRUE	0.961	7.000	0.018	1.000	Y	NA
2100189	2100190	BCG_1895	BCG_1896	modC	apa	FALSE	0.350	53.000	0.052	1.000		NA
2100190	2100191	BCG_1896	BCG_1897	apa		FALSE	0.017	452.000	0.238	1.000		NA
2100191	2100192	BCG_1897	BCG_1898		adhA	FALSE	0.427	75.000	0.189	1.000		NA
2100193	2100194	BCG_1899c	BCG_1900c			FALSE	0.490	-7.000	0.000	NA		NA
2100194	2100195	BCG_1900c	BCG_1901c			TRUE	0.924	-3.000	0.000	1.000		NA
2100196	2100197	BCG_1902	BCG_1903			FALSE	0.017	288.000	0.143	1.000	N	NA
2100197	2100198	BCG_1903	BCG_1904			FALSE	0.309	99.000	0.214	1.000	N	NA
2100199	2100200	BCG_1905c	BCG_1906c			FALSE	0.206	67.000	0.000	1.000		NA
2100200	2100201	BCG_1906c	BCG_1907c			FALSE	0.133	65.000	0.000	NA		NA
2100201	2100202	BCG_1907c	BCG_1908c		lldD2	FALSE	0.251	23.000	0.000	NA		NA
2100203	2100204	BCG_1909	BCG_1910			FALSE	0.130	73.000	0.000	NA		NA
2100204	2100205	BCG_1910	BCG_1911			TRUE	0.784	11.000	0.188	NA		NA
2100205	2100206	BCG_1911	BCG_1912		bfrA	FALSE	0.004	516.000	0.000	1.000		NA
2100206	2100207	BCG_1912	BCG_1913	bfrA		FALSE	0.359	85.000	0.135	1.000		NA
2100207	2100208	BCG_1913	BCG_1914			TRUE	0.596	-685.000	0.000	0.044		NA
2100208	2100209	BCG_1914	BCG_1915		glnA3	FALSE	0.222	55.000	0.000	1.000		NA
2100209	2100210	BCG_1915	BCG_1916	glnA3		TRUE	0.967	3.000	0.364	1.000		NA
2100211	2100212	BCG_1917c	BCG_1918c	cyp140	lppE	FALSE	0.493	50.000	0.273	NA		NA
2100212	2100213	BCG_1918c	BCG_1919c	lppE		FALSE	0.331	41.000	0.070	NA		NA
2100213	2100214	BCG_1919c	BCG_1920c			FALSE	0.420	28.000	0.093	NA		NA
2100214	2100215	BCG_1920c	BCG_1921c		rpfC	TRUE	0.618	39.000	0.375	NA		NA
2100215	2100216	BCG_1921c	BCG_1922c	rpfC		TRUE	0.669	12.000	0.018	1.000		NA
2100216	2100217	BCG_1922c	BCG_1923c		fbpB	FALSE	0.434	18.000	0.018	NA		NA
2100219	2100220	BCG_1925c	BCG_1926c			FALSE	0.004	365.000	0.000	NA		NA
2100220	2100221	BCG_1926c	BCG_1927c			FALSE	0.157	44.000	0.000	NA		NA
2100221	2100222	BCG_1927c	BCG_1928c			FALSE	0.139	59.000	0.000	NA		NA
2100223	2100224	BCG_1929	BCG_1930			TRUE	0.767	17.000	0.333	NA		NA
2100224	2100225	BCG_1930	BCG_1931			TRUE	0.903	10.000	0.375	NA		NA
2100227	2100228	BCG_1933	BCG_1934			TRUE	0.983	-3.000	0.000	0.016		NA
2100229	2100230	BCG_1935c	BCG_1936c			FALSE	0.466	5.000	0.004	NA	N	NA
2100232	2100233	BCG_1938c	BCG_1939c	lppD	lipJ	TRUE	0.837	0.000	0.000	NA		NA
2100236	2100237	BCG_1942	BCG_1943			FALSE	0.022	186.000	0.000	NA		NA
2100238	2100239	BCG_1944c	BCG_1945c	aao		FALSE	0.441	30.000	0.143	NA		NA
2100239	2100240	BCG_1945c	BCG_1946c			FALSE	0.005	340.000	0.000	NA		NA
2100240	2100241	BCG_1946c	BCG_1947c		katG	TRUE	0.617	7.000	0.000	NA		NA
2100241	2100242	BCG_1947c	BCG_1948c	katG	furA	TRUE	0.781	38.000	0.057	1.000	Y	NA
2100242	2100243	BCG_1948c	BCG_1949c	furA		FALSE	0.100	105.000	0.000	NA		NA
2100243	2100244	BCG_1949c	BCG_1950c		lppC	FALSE	0.121	83.000	0.000	NA		NA
2100244	2100245	BCG_1950c	BCG_1951c	lppC	fadB5	FALSE	0.110	100.000	0.000	NA		NA
2100249	2100250	BCG_1955c	BCG_1956c	PPE34	PPE35b	FALSE	0.005	338.000	0.000	NA		NA
2100250	2100251	BCG_1956c	BCG_1957c	PPE35b	PPE35a	FALSE	0.121	83.000	0.000	NA		NA
2100251	2100252	BCG_1957c	BCG_1958c	PPE35a		FALSE	0.003	449.000	0.000	NA		NA
2100255	2100256	BCG_1961	BCG_1962		lipD	TRUE	0.986	-9.000	0.333	0.004	Y	NA
2100261	2100262	BCG_1967c	BCG_1968c			FALSE	0.155	45.000	0.000	NA		NA
2100262	2100263	BCG_1968c	BCG_1969c			FALSE	0.434	12.000	0.000	NA		NA
2100263	2100264	BCG_1969c	BCG_1970c			FALSE	0.298	18.000	0.000	NA		NA
2100266	2100267	BCG_1972c	BCG_1973c	fadE18	fadE17	TRUE	0.998	2.000	0.800	0.010	Y	NA
2100267	2100268	BCG_1973c	BCG_1974c	fadE17	echA13	TRUE	0.969	15.000	0.600	1.000	Y	NA
2100269	2100270	BCG_1975	BCG_1976			TRUE	0.992	3.000	0.500	NA	Y	NA
2100270	2100271	BCG_1976	BCG_1977		ephB	TRUE	0.958	12.000	1.000	1.000		NA
2100271	2100272	BCG_1977	BCG_1978	ephB		TRUE	0.984	-3.000	0.333	1.000		NA
2100272	2100273	BCG_1978	BCG_1979		ribA1	TRUE	0.954	-3.000	0.036	1.000		NA
2100273	2100274	BCG_1979	BCG_1980	ribA1		TRUE	0.914	-3.000	0.036	1.000	N	NA
2100275	2100276	BCG_1981c	BCG_1982c			TRUE	0.992	-3.000	0.750	NA		NA
2100276	2100277	BCG_1982c	BCG_1983c			TRUE	0.876	-3.000	0.000	NA		NA
2100281	2100282	BCG_1987c	BCG_1988c			FALSE	0.485	11.000	0.000	NA		NA
2100282	2100283	BCG_1988c	BCG_1989c			FALSE	0.270	21.000	0.000	NA		NA
2100283	2100284	BCG_1989c	BCG_1990c			TRUE	0.797	1.000	0.000	NA		NA
2100285	2100286	BCG_1991	BCG_1992			TRUE	0.876	-3.000	0.000	NA		NA
2100288	2100289	BCG_1994	BCG_1995			FALSE	0.161	42.000	0.000	NA		NA
2100289	2100290	BCG_1995	BCG_1996			TRUE	0.924	-3.000	0.000	1.000		NA
2100291	2100292	BCG_1997c	BCG_1998c			FALSE	0.149	49.000	0.000	NA		NA
2100292	2100293	BCG_1998c	BCG_1999c			TRUE	0.983	-3.000	0.385	NA		NA
2100295	2100296	BCG_2001c	BCG_2001A			TRUE	0.939	4.000	0.286	NA		NA
2100296	2100297	BCG_2001A	BCG_2002c			FALSE	0.184	33.000	0.000	NA		NA
2100298	2100299	BCG_2003	BCG_2004	yrbE3A		FALSE	0.120	85.000	0.000	NA		NA
2100300	2100301	BCG_2005c	BCG_2006c			TRUE	0.995	-3.000	1.000	NA		NA
2100301	2100302	BCG_2006c	BCG_2007c			FALSE	0.010	244.000	0.000	NA		NA
2100302	2100303	BCG_2007c	BCG_2008c			FALSE	0.118	89.000	0.000	NA		NA
2100303	2100304	BCG_2008c	BCG_2009c		ctpG	FALSE	0.002	342.000	0.000	1.000	N	NA
2100304	2100305	BCG_2009c	BCG_2010c	ctpG		TRUE	0.876	-3.000	0.000	NA		NA
2100305	2100306	BCG_2010c	BCG_2011c			FALSE	0.145	53.000	0.000	NA		NA
2100307	2100308	BCG_2012	BCG_2013			FALSE	0.115	96.000	0.000	NA		NA
2100308	2100309	BCG_2013	BCG_2014		ctpF	FALSE	0.010	202.000	0.000	1.000	N	NA
2100310	2100311	BCG_2015c	BCG_2016c			FALSE	0.066	95.000	0.000	1.000	N	NA
2100312	2100313	BCG_2017	BCG_2018			TRUE	0.773	10.000	0.118	NA		NA
2100313	2100314	BCG_2018	BCG_2019		fabG3	TRUE	0.651	76.000	0.000	1.000	Y	NA
2100315	2100316	BCG_2020c	BCG_2021c			FALSE	0.219	58.000	0.000	1.000		NA
2100316	2100317	BCG_2021c	BCG_2022c			FALSE	0.377	22.000	0.000	1.000		NA
2100319	2100320	BCG_2024c	BCG_2025c	fdxA		FALSE	0.021	189.000	0.000	NA		NA
2100321	2100322	BCG_2026	BCG_2027			TRUE	0.797	1.000	0.000	NA		NA
2100324	2100325	BCG_2029	BCG_2030			FALSE	0.002	704.000	0.000	NA		NA
2100325	2100326	BCG_2030	BCG_2031			TRUE	0.736	-46.000	0.000	0.008		NA
2100328	2100329	BCG_2033	BCG_2034			TRUE	0.876	-3.000	0.000	NA		NA
2100329	2100330	BCG_2034	BCG_2035			FALSE	0.011	242.000	0.000	NA		NA
2100330	2100331	BCG_2035	BCG_2036			TRUE	0.816	-10.000	0.294	NA		NA
2100332	2100333	BCG_2037c	BCG_2038c			FALSE	0.120	85.000	0.000	NA		NA
2100333	2100334	BCG_2038c	BCG_2039c			TRUE	0.913	9.000	0.375	NA		NA
2100334	2100335	BCG_2039c	BCG_2040c			FALSE	0.233	25.000	0.000	NA		NA
2100335	2100336	BCG_2040c	BCG_2041c			FALSE	0.033	160.000	0.000	NA		NA
2100336	2100337	BCG_2041c	BCG_2042c			FALSE	0.003	395.000	0.000	NA		NA
2100337	2100338	BCG_2042c	BCG_2043c			FALSE	0.023	184.000	0.000	NA		NA
2100338	2100339	BCG_2043c	BCG_2044c			FALSE	0.004	510.000	0.000	1.000		NA
2100339	2100340	BCG_2044c	BCG_2045c			FALSE	0.044	115.000	0.000	1.000	N	NA
2100340	2100341	BCG_2045c	BCG_2046c			TRUE	0.714	40.000	0.000	1.000	Y	NA
2100341	2100342	BCG_2046c	BCG_2047c			TRUE	0.667	61.000	0.000	1.000	Y	NA
2100342	2100343	BCG_2047c	BCG_2048c		pfkB	TRUE	0.793	-3.000	0.000	1.000	N	NA
2100343	2100344	BCG_2048c	BCG_2049c	pfkB		TRUE	0.593	17.000	0.050	1.000		NA
2100344	2100345	BCG_2049c	BCG_2050c		hspX	TRUE	0.828	12.000	0.300	NA		NA
2100348	2100349	BCG_2053	BCG_2054			TRUE	0.966	-3.000	0.200	NA		NA
2100349	2100350	BCG_2054	BCG_2055			TRUE	0.959	-3.000	0.150	NA		NA
2100351	2100352	BCG_2056c	BCG_2057c			TRUE	0.976	2.000	0.444	1.000		NA
2100352	2100353	BCG_2057c	BCG_2058c			TRUE	0.994	3.000	0.211	0.020	Y	NA
2100353	2100354	BCG_2058c	BCG_2059c			TRUE	0.971	-13.000	0.211	0.020	Y	NA
2100354	2100355	BCG_2059c	BCG_2060c			TRUE	0.998	-3.000	0.235	0.020	Y	NA
2100355	2100356	BCG_2060c	BCG_2061c			TRUE	0.714	38.000	0.118	0.026		NA
2100356	2100357	BCG_2061c	BCG_2062c		pncA	TRUE	0.923	0.000	0.005	1.000		NA
2100357	2100358	BCG_2062c	BCG_2063c	pncA		FALSE	0.163	41.000	0.000	NA		NA
2100358	2100359	BCG_2063c	BCG_2064c		lipT	FALSE	0.119	86.000	0.000	NA		NA
2100361	2100362	BCG_2066c	BCG_2067c		pks12	TRUE	0.981	5.000	1.000	1.000	N	NA
2100362	2100363	BCG_2067c	BCG_2068c	pks12		FALSE	0.006	307.000	0.000	NA		NA
2100365	2100366	BCG_2070c	BCG_2071c	ppm1		FALSE	0.332	158.000	0.041	0.003		NA
2100366	2100367	BCG_2071c	BCG_2072c			TRUE	0.867	5.000	0.037	1.000		NA
2100369	2100370	BCG_2074c	BCG_2075c	rpsR2	rpsN2	TRUE	0.994	1.000	0.024	0.014	Y	NA
2100370	2100371	BCG_2075c	BCG_2076c	rpsN2	rpmG1	TRUE	0.993	2.000	0.052	0.014	Y	NA
2100371	2100372	BCG_2076c	BCG_2077c	rpmG1	rpmB2	TRUE	0.998	0.000	0.332	0.014	Y	NA
2100374	2100375	BCG_2080c	BCG_2081c		cobN	FALSE	0.295	84.000	0.045	1.000		NA
2100376	2100377	BCG_2082	BCG_2083		cobG	FALSE	0.006	387.000	0.000	1.000		NA
2100377	2100378	BCG_2083	BCG_2084	cobG	cobH	TRUE	0.836	10.000	0.255	1.000	N	NA
2100378	2100379	BCG_2084	BCG_2085	cobH	cobI	TRUE	0.997	-3.000	0.096	0.008	Y	NA
2100380	2100381	BCG_2086c	BCG_2087c		blaC	FALSE	0.468	16.000	0.000	1.000		NA
2100383	2100384	BCG_2089c	BCG_2090c	cobK	cobM	TRUE	0.908	37.000	0.076	0.008	Y	NA
2100384	2100385	BCG_2090c	BCG_2091c	cobM	cobLb	TRUE	0.997	-3.000	0.065	0.008	Y	NA
2100385	2100386	BCG_2091c	BCG_2092c	cobLb	cobLa	TRUE	0.794	-58.000	0.000	0.001		NA
2100386	2100387	BCG_2092c	BCG_2093c	cobLa		FALSE	0.202	75.000	0.000	1.000		NA
2100387	2100388	BCG_2093c	BCG_2094c			FALSE	0.034	158.000	0.000	NA		NA
2100388	2100389	BCG_2094c	BCG_2095c			FALSE	0.178	35.000	0.000	NA		NA
2100389	2100390	BCG_2095c	BCG_2096c			TRUE	0.797	1.000	0.000	NA		NA
2100391	2100392	BCG_2097	BCG_2098			TRUE	0.852	-18.000	0.500	NA		NA
2100392	2100393	BCG_2098	BCG_2099		lppJ	FALSE	0.327	-19.000	0.000	NA		NA
2100395	2100396	BCG_2101	BCG_2102			TRUE	0.876	-3.000	0.000	NA		NA
2100396	2100397	BCG_2102	BCG_2103			FALSE	0.490	-7.000	0.000	NA		NA
2100397	2100398	BCG_2103	BCG_2104			FALSE	0.205	-180.000	0.000	NA		NA
2100398	2100399	BCG_2104	BCG_2105			FALSE	0.121	83.000	0.000	NA		NA
2100399	2100400	BCG_2105	BCG_2106			FALSE	0.315	-21.000	0.000	NA		NA
2100400	2100401	BCG_2106	BCG_2107			FALSE	0.127	78.000	0.000	NA		NA
2100401	2100402	BCG_2107	BCG_2108		pknJ	FALSE	0.021	187.000	0.000	NA		NA
2100405	2100406	BCG_2111c	BCG_2112c		helY	FALSE	0.354	42.000	0.105	NA		NA
2100406	2100407	BCG_2112c	BCG_2113c	helY	tatC	FALSE	0.249	49.000	0.166	NA	N	NA
2100407	2100408	BCG_2113c	BCG_2114c	tatC	tatA	TRUE	0.863	17.000	0.031	NA	Y	NA
2100408	2100409	BCG_2114c	BCG_2115c	tatA		FALSE	0.181	68.000	0.110	NA	N	NA
2100409	2100410	BCG_2115c	BCG_2116c			TRUE	0.998	-3.000	0.767	NA	Y	NA
2100410	2100411	BCG_2116c	BCG_2117c			TRUE	0.834	9.000	0.188	NA		NA
2100411	2100412	BCG_2117c	BCG_2118c		PE_PGRS36	FALSE	0.145	52.000	0.000	NA		NA
2100413	2100414	BCG_2119	BCG_2120		helZ	FALSE	0.031	199.000	0.000	1.000		NA
2100414	2100415	BCG_2120	BCG_2121	helZ		FALSE	0.355	110.000	0.222	1.000		NA
2100416	2100417	BCG_2122c	BCG_2123c			TRUE	0.962	7.000	0.667	NA		NA
2100418	2100419	BCG_2124	BCG_2125	PE22	PPE36	TRUE	0.810	56.000	1.000	NA		NA
2100420	2100421	BCG_2126c	BCG_2127c	prcA	prcB	TRUE	0.999	-3.000	0.797	0.001	Y	NA
2100421	2100422	BCG_2127c	BCG_2128c	prcB		TRUE	0.988	-3.000	0.512	NA		NA
2100422	2100423	BCG_2128c	BCG_2129c			TRUE	0.602	113.000	0.706	NA		NA
2100424	2100425	BCG_2130	BCG_2131			TRUE	0.793	11.000	0.200	NA		NA
2100427	2100428	BCG_2133	BCG_2134	lppK		TRUE	0.741	8.000	0.030	NA		NA
2100431	2100432	BCG_2137c	BCG_2138c		hisG	FALSE	0.257	79.000	0.006	1.000		NA
2100432	2100433	BCG_2138c	BCG_2139c	hisG	hisE	TRUE	0.994	3.000	0.081	0.003	Y	NA
2100438	2100439	BCG_2144	BCG_2145	ansP1		TRUE	0.837	0.000	0.000	NA		NA
2100440	2100441	BCG_2146c	BCG_2147c		cysS2	FALSE	0.520	26.000	0.096	1.000		NA
2100441	2100442	BCG_2147c	BCG_2148c	cysS2	cysQ	FALSE	0.253	58.000	0.082	1.000	N	NA
2100444	2100445	BCG_2150c	BCG_2151c			TRUE	0.951	11.000	0.810	NA		NA
2100445	2100446	BCG_2151c	BCG_2152c			TRUE	0.684	64.000	0.608	NA		NA
2100446	2100447	BCG_2152c	BCG_2153c			TRUE	0.895	-3.000	0.071	NA	N	NA
2100447	2100448	BCG_2153c	BCG_2154c			FALSE	0.229	64.000	0.026	NA		NA
2100449	2100450	BCG_2155	BCG_2156	lppL	pyrD	FALSE	0.005	314.000	0.000	NA		NA
2100451	2100452	BCG_2157c	BCG_2158c	TB18.6		FALSE	0.452	48.000	0.224	NA		NA
2100456	2100457	BCG_2161c	BCG_2162c		wag31	FALSE	0.299	95.000	0.149	NA		NA
2100457	2100458	BCG_2162c	BCG_2163c	wag31		FALSE	0.024	268.000	0.114	NA		NA
2100458	2100459	BCG_2163c	BCG_2164c			FALSE	0.100	162.000	0.165	NA		NA
2100459	2100460	BCG_2164c	BCG_2165c			TRUE	0.989	-3.000	0.581	NA		NA
2100460	2100461	BCG_2165c	BCG_2166c		yfiH	TRUE	0.817	6.000	0.061	NA		NA
2100461	2100462	BCG_2166c	BCG_2167c	yfiH	ftsZ	TRUE	0.717	11.000	0.082	NA		NA
2100462	2100463	BCG_2167c	BCG_2168c	ftsZ	ftsQ	FALSE	0.050	173.000	0.067	1.000	N	NA
2100463	2100464	BCG_2168c	BCG_2169c	ftsQ	murC	TRUE	0.993	-3.000	0.134	1.000	Y	NA
2100464	2100465	BCG_2169c	BCG_2170c	murC	murG	TRUE	0.995	-3.000	0.270	1.000	Y	NA
2100465	2100466	BCG_2170c	BCG_2171c	murG	ftsW	TRUE	0.952	-3.000	0.167	1.000	N	NA
2100466	2100467	BCG_2171c	BCG_2172c	ftsW		TRUE	0.893	12.000	0.081	0.004	N	NA
2100467	2100468	BCG_2172c	BCG_2173c		murX	TRUE	0.998	2.000	0.647	0.004	Y	NA
2100468	2100469	BCG_2173c	BCG_2174c	murX	murF	TRUE	0.997	-3.000	0.071	0.004	Y	NA
2100469	2100470	BCG_2174c	BCG_2175c	murF	murE	TRUE	0.999	-3.000	0.367	0.001	Y	NA
2100470	2100471	BCG_2175c	BCG_2176c	murE		FALSE	0.251	23.000	0.000	NA		NA
2100471	2100472	BCG_2176c	BCG_2177c			TRUE	0.876	-3.000	0.000	NA		NA
2100472	2100473	BCG_2177c	BCG_2178c			FALSE	0.490	-7.000	0.000	NA		NA
2100473	2100474	BCG_2178c	BCG_2179c		PE_PGRS38	FALSE	0.105	103.000	0.000	NA		NA
2100474	2100475	BCG_2179c	BCG_2180c	PE_PGRS38	pbpB	FALSE	0.016	210.000	0.000	NA		NA
2100475	2100476	BCG_2180c	BCG_2181c	pbpB		TRUE	0.958	-3.000	0.144	NA		NA
2100476	2100477	BCG_2181c	BCG_2182c			TRUE	0.933	-3.000	0.028	NA		NA
2100477	2100478	BCG_2182c	BCG_2183c			TRUE	0.981	2.000	0.635	NA		NA
2100478	2100479	BCG_2183c	BCG_2184c			FALSE	0.004	349.000	0.000	NA		NA
2100480	2100481	BCG_2185	BCG_2186		lppM	FALSE	0.401	96.000	0.250	NA		NA
2100483	2100484	BCG_2188	BCG_2189	idsA2		TRUE	0.942	4.000	0.298	NA		NA
2100487	2100488	BCG_2192c	BCG_2193c		aroG	FALSE	0.006	385.000	0.000	1.000		NA
2100488	2100489	BCG_2193c	BCG_2194c	aroG		FALSE	0.512	91.000	0.301	1.000		NA
2100489	2100490	BCG_2194c	BCG_2195c			TRUE	0.779	10.000	0.132	NA		NA
2100492	2100493	BCG_2197c	BCG_2198c			FALSE	0.548	86.000	0.417	NA		NA
2100493	2100494	BCG_2198c	BCG_2199c			TRUE	0.988	-3.000	0.500	NA		NA
2100494	2100495	BCG_2199c	BCG_2200c		TB16.3	FALSE	0.225	120.000	0.184	NA		NA
2100495	2100496	BCG_2200c	BCG_2201c	TB16.3		FALSE	0.276	105.000	0.164	NA		NA
2100497	2100498	BCG_2202	BCG_2203		fadD15	TRUE	0.752	-237.000	0.000	0.001		NA
2100499	2100500	BCG_2204c	BCG_2205c			FALSE	0.408	97.000	0.258	NA		NA
2100500	2100501	BCG_2205c	BCG_2206c			TRUE	0.576	95.000	0.471	NA		NA
2100504	2100505	BCG_2209	BCG_2210	ctaE	qcrC	TRUE	0.884	41.000	0.088	0.056	Y	NA
2100505	2100506	BCG_2210	BCG_2211	qcrC	qcrA	TRUE	0.998	-3.000	0.421	0.056	Y	NA
2100506	2100507	BCG_2211	BCG_2212	qcrA	qcrB	TRUE	0.999	-3.000	0.660	0.041	Y	NA
2100508	2100509	BCG_2213c	BCG_2214c		mmpS3	TRUE	0.992	0.000	0.900	NA		NA
2100509	2100510	BCG_2214c	BCG_2215c	mmpS3		FALSE	0.058	186.000	0.092	NA		NA
2100510	2100511	BCG_2215c	BCG_2216c		ctaC	TRUE	0.915	8.000	0.342	NA		NA
2100515	2100516	BCG_2220c	BCG_2221c			FALSE	0.180	100.000	0.016	NA		NA
2100517	2100518	BCG_2222	BCG_2223		cobT	FALSE	0.288	79.000	0.095	NA		NA
2100518	2100519	BCG_2223	BCG_2224	cobT	cobS	TRUE	0.997	-3.000	0.039	0.008	Y	NA
2100519	2100520	BCG_2224	BCG_2225	cobS		FALSE	0.050	158.000	0.003	NA		NA
2100521	2100522	BCG_2226c	BCG_2227c	ilvE	gcvT	TRUE	0.703	72.000	0.025	1.000	Y	NA
2100523	2100524	BCG_2228	BCG_2229		pepB	FALSE	0.544	12.000	0.041	1.000	N	NA
2100526	2100527	BCG_2231	BCG_2232	dlaT		TRUE	0.978	0.000	0.333	1.000		NA
2100527	2100528	BCG_2232	BCG_2233		lipB	TRUE	0.604	53.000	0.019	0.040		NA
2100528	2100529	BCG_2233	BCG_2234	lipB	lipA	TRUE	0.999	-3.000	0.319	0.001	Y	NA
2100529	2100530	BCG_2234	BCG_2235	lipA		FALSE	0.393	27.000	0.059	NA		NA
2100533	2100534	BCG_2238c	BCG_2239c	glnE	glnA2	FALSE	0.221	49.000	0.046	1.000	N	NA
2100534	2100535	BCG_2239c	BCG_2240c	glnA2		FALSE	0.219	95.000	0.042	NA		NA
2100535	2100536	BCG_2240c	BCG_2241c			TRUE	0.697	62.000	0.636	NA		NA
2100537	2100538	BCG_2242	BCG_2243	panB		FALSE	0.017	245.000	0.000	1.000		NA
2100540	2100541	BCG_2244	BCG_2245			TRUE	0.590	8.000	0.000	NA		NA
2100542	2100543	BCG_2246c	BCG_2247c			TRUE	0.985	-3.000	0.422	NA		NA
2100543	2100544	BCG_2247c	BCG_2248c			TRUE	0.986	-3.000	0.468	NA		NA
2100544	2100545	BCG_2248c	BCG_2249c		cobC	TRUE	0.955	-3.000	0.121	NA		NA
2100546	2100547	BCG_2250	BCG_2251		ptpA	TRUE	0.732	-7.000	0.029	1.000		NA
2100547	2100548	BCG_2251	BCG_2252	ptpA		TRUE	0.898	0.000	0.013	NA		NA
5582097	2100552	BCG_t25	BCG_2255c	tRNA-Val	ahpE	FALSE	0.154	46.000	0.000	NA		NA
2100552	2100553	BCG_2255c	BCG_2256c	ahpE		TRUE	0.985	0.000	0.575	NA		NA
2100553	2100554	BCG_2256c	BCG_2257c			FALSE	0.374	38.000	0.113	NA		NA
2100555	2100556	BCG_2258	BCG_2259	aceE		FALSE	0.239	60.000	0.169	NA	N	NA
2100556	2100557	BCG_2259	BCG_2260		fabD	FALSE	0.071	239.000	0.441	NA	N	NA
2100557	2100558	BCG_2260	BCG_2261	fabD	acpM	TRUE	0.744	76.000	0.127	1.000	Y	NA
2100558	2100559	BCG_2261	BCG_2262	acpM	kasA	TRUE	0.993	-3.000	0.089	1.000	Y	NA
2100559	2100560	BCG_2262	BCG_2263	kasA	kasB	TRUE	0.968	31.000	0.400	0.001	Y	NA
2100560	2100561	BCG_2263	BCG_2264	kasB	accD6	TRUE	0.857	31.000	0.222	1.000	Y	NA
2100561	2100562	BCG_2264	BCG_2265	accD6		FALSE	0.229	108.000	0.111	NA		NA
2100562	2100563	BCG_2265	BCG_2266			FALSE	0.190	-292.000	0.000	NA		NA
2100564	2100565	BCG_2267c	BCG_2268c	glpD1		TRUE	0.949	-6.000	0.727	1.000	N	NA
2100566	2100567	BCG_2269	BCG_2270			TRUE	0.960	-3.000	0.204	1.000	N	NA
2100567	2100568	BCG_2270	BCG_2271			FALSE	0.248	66.000	0.043	NA		NA
2100569	2100570	BCG_2272c	BCG_2273c			TRUE	0.689	5.000	0.000	NA		NA
2100570	2100571	BCG_2273c	BCG_2274c			FALSE	0.029	167.000	0.000	NA		NA
2100571	2100572	BCG_2274c	BCG_2275c			FALSE	0.211	130.000	0.200	NA		NA
2100572	2100573	BCG_2275c	BCG_2276c			TRUE	0.623	14.000	0.163	1.000	N	NA
2100574	2100575	BCG_2277	BCG_2278	adhE2		TRUE	0.987	0.000	0.538	1.000		NA
2100579	2100580	BCG_2282	BCG_2283		cyp124	FALSE	0.026	175.000	0.000	NA		NA
2100581	2100582	BCG_2284c	BCG_2285c		cyp128	TRUE	0.924	-3.000	0.000	1.000		NA
2100582	2100583	BCG_2285c	BCG_2286c	cyp128		FALSE	0.400	13.000	0.000	NA		NA
2100584	2100585	BCG_2287	BCG_2288	lppN		FALSE	0.095	107.000	0.000	NA		NA
2100585	2100586	BCG_2288	BCG_2289			FALSE	0.098	106.000	0.000	NA		NA
2100586	2100587	BCG_2289	BCG_2290			TRUE	0.965	-3.000	0.190	NA		NA
2100589	2100590	BCG_2292	BCG_2293		cyp121	TRUE	0.876	-3.000	0.000	NA		NA
2100592	2100593	BCG_2295	BCG_2296		pitB	FALSE	0.006	234.000	0.000	1.000	N	NA
2100595	2100596	BCG_2298	BCG_2299		lipM	FALSE	0.535	10.000	0.000	NA		NA
2100596	2100597	BCG_2299	BCG_2300	lipM		FALSE	0.184	33.000	0.000	NA		NA
2100598	2100599	BCG_2301c	BCG_2302c			FALSE	0.207	28.000	0.000	NA		NA
2100600	2100601	BCG_2303	BCG_2304	yjcE		TRUE	0.876	-3.000	0.000	NA		NA
2100601	2100602	BCG_2304	BCG_2305		cdh	FALSE	0.261	-30.000	0.000	NA		NA
2100602	2100603	BCG_2305	BCG_2306	cdh	lppOa	FALSE	0.046	142.000	0.000	NA		NA
2100603	2100604	BCG_2306	BCG_2307	lppOa	lppOb	FALSE	0.544	-6.000	0.000	NA		NA
2100604	2100605	BCG_2307	BCG_2308	lppOb	sseB	FALSE	0.138	60.000	0.000	NA		NA
2100607	2100608	BCG_2310	BCG_2311			FALSE	0.013	223.000	0.000	NA		NA
2100608	2100609	BCG_2311	BCG_2312			FALSE	0.116	94.000	0.000	NA		NA
2100609	2100610	BCG_2312	BCG_2313			FALSE	0.188	32.000	0.000	NA		NA
2100610	2100611	BCG_2313	BCG_2314			FALSE	0.020	192.000	0.000	NA		NA
2100612	2100613	BCG_2315c	BCG_2316c	htpG		FALSE	0.203	74.000	0.000	1.000		NA
2100614	2100615	BCG_2317	BCG_2318	cut2		FALSE	0.098	106.000	0.000	NA		NA
2100616	2100617	BCG_2319c	BCG_2320c			TRUE	0.876	-3.000	0.000	NA		NA
2100618	2100619	BCG_2321	BCG_2322			FALSE	0.535	10.000	0.000	NA		NA
2100619	2100620	BCG_2322	BCG_2323			FALSE	0.203	-213.000	0.000	NA		NA
2100621	2100622	BCG_2324c	BCG_2325c			FALSE	0.002	532.000	0.000	NA		NA
2100622	2100623	BCG_2325c	BCG_2326c			FALSE	0.120	85.000	0.000	NA		NA
2100623	2100624	BCG_2326c	BCG_2327c			FALSE	0.117	93.000	0.000	NA		NA
5582098	2100627	BCG_t26	BCG_2329c	tRNA-Met		TRUE	0.648	6.000	0.000	NA		NA
2100628	2100629	BCG_2330	BCG_2331			FALSE	0.105	103.000	0.000	NA		NA
2100629	2100630	BCG_2331	BCG_2332			FALSE	0.100	105.000	0.000	NA		NA
2100630	2100631	BCG_2332	BCG_2333			FALSE	0.127	78.000	0.000	NA		NA
2100632	2100633	BCG_2334c	BCG_2335c			TRUE	0.739	11.000	0.121	NA		NA
2100633	2100634	BCG_2335c	BCG_2336c			TRUE	0.994	-3.000	0.914	NA		NA
2100635	2100636	BCG_2337	BCG_2338	uspA	uspB	TRUE	0.991	-13.000	0.818	0.019	Y	NA
2100636	2100637	BCG_2338	BCG_2339	uspB	uspC	TRUE	0.999	-3.000	0.727	0.019	Y	NA
2100638	2100639	BCG_2340c	BCG_2341c		rocE	TRUE	0.984	-3.000	0.444	1.000	N	NA
2100639	2100640	BCG_2341c	BCG_2342c	rocE	rocD2	TRUE	0.910	1.000	0.015	1.000		NA
2100640	2100641	BCG_2342c	BCG_2343c	rocD2	rocD1	TRUE	0.985	0.000	0.000	0.001		NA
2100641	2100642	BCG_2343c	BCG_2344c	rocD1		TRUE	0.955	-3.000	0.038	1.000		NA
2100644	2100645	BCG_2346c	BCG_2347c			TRUE	0.978	-3.000	0.240	1.000		NA
2100646	2100647	BCG_2348	BCG_2349		PE23	FALSE	0.016	252.000	0.000	1.000		NA
2100648	2100649	BCG_2350c	BCG_2351c	narK1	lppP	FALSE	0.012	234.000	0.000	NA		NA
2100650	2100651	BCG_2352	BCG_2353			FALSE	0.142	57.000	0.000	NA		NA
2100651	2100652	BCG_2353	BCG_2354		mez	FALSE	0.198	30.000	0.000	NA		NA
2100654	2100655	BCG_2356	BCG_2357	cysK1		TRUE	0.994	4.000	0.133	0.001	Y	NA
2100655	2100656	BCG_2357	BCG_2358			FALSE	0.003	416.000	0.000	NA		NA
2100657	2100658	BCG_2359c	BCG_2360c		moeW	FALSE	0.071	120.000	0.000	NA		NA
2100659	2100660	BCG_2361	BCG_2362	mmpL9a	mmpL9b	TRUE	0.826	13.000	0.000	0.040		NA
2100661	5582099	BCG_2363c	BCG_t27	PE_PGRS39	tRNA-Asn	FALSE	0.003	499.000	0.000	NA		NA
2100663	2100664	BCG_2364	BCG_2365	lppQ		FALSE	0.009	256.000	0.000	NA		NA
2100665	2100666	BCG_2366c	BCG_2367c	dnaG	dgt	TRUE	0.769	5.000	0.037	1.000	N	NA
2100668	2100669	BCG_2369c	BCG_2370c	esxO	PPE71	FALSE	0.349	-16.000	0.000	NA		NA
2100669	2100670	BCG_2370c	BCG_2371c	PPE71	glyS	FALSE	0.004	138.000	0.000	NA	N	NA
2100671	2100672	BCG_2372	BCG_2373		furB	TRUE	0.978	-3.000	0.021	0.043	N	NA
2100673	2100674	BCG_2374c	BCG_2375c			TRUE	0.902	0.000	0.017	NA		NA
2100674	2100675	BCG_2375c	BCG_2376c			TRUE	0.659	-7.000	0.076	1.000	N	NA
2100677	2100678	BCG_2378c	BCG_2379c	era		FALSE	0.215	74.000	0.021	NA		NA
2100678	2100679	BCG_2379c	BCG_2380c			FALSE	0.408	-28.000	0.025	NA		NA
2100679	2100680	BCG_2380c	BCG_2381c			TRUE	0.970	-3.000	0.222	NA		NA
2100680	2100681	BCG_2381c	BCG_2382c		phoH1	TRUE	0.963	4.000	0.457	NA		NA
2100681	2100682	BCG_2382c	BCG_2383c	phoH1		FALSE	0.265	-28.000	0.000	NA		NA
2100682	2100683	BCG_2383c	BCG_2384c			TRUE	0.876	-3.000	0.000	NA		NA
2100685	2100686	BCG_2386c	BCG_2387c		dnaJ2	TRUE	0.613	14.000	0.073	NA		NA
2100686	2100687	BCG_2387c	BCG_2388c	dnaJ2	hrcA	FALSE	0.216	75.000	0.064	1.000	N	NA
2100689	2100690	BCG_2390c	BCG_2391c	cfp2	mbtH	FALSE	0.110	100.000	0.000	NA		NA
2100690	2100691	BCG_2391c	BCG_2392c	mbtH	mbtG	FALSE	0.296	-22.000	0.000	NA		NA
2100691	2100692	BCG_2392c	BCG_2393c	mbtG	mbtF	TRUE	0.996	-3.000	0.400	1.000	Y	NA
2100692	2100693	BCG_2393c	BCG_2394c	mbtF	mbtE	TRUE	0.985	-18.000	0.462	0.003	Y	NA
2100693	2100694	BCG_2394c	BCG_2395c	mbtE	mbtD	TRUE	0.649	140.000	0.000	0.005	Y	NA
2100694	2100695	BCG_2395c	BCG_2396c	mbtD	mbtC	TRUE	0.976	0.000	0.000	0.017		NA
2100695	2100696	BCG_2396c	BCG_2397c	mbtC	mbtB	TRUE	0.853	-10.000	0.000	0.017		NA
2100697	2100698	BCG_2398	BCG_2399	mbtA	mbtJ	FALSE	0.479	96.000	0.095	0.090	N	NA
2100701	2100702	BCG_2402c	BCG_2403c	hemN	rpfD	FALSE	0.156	106.000	0.000	1.000		NA
2100702	2100703	BCG_2403c	BCG_2404c	rpfD		TRUE	0.876	-3.000	0.000	NA		NA
2100704	2100705	BCG_2405	BCG_2406	nirA	cysH	TRUE	0.917	-3.000	0.041	1.000	N	NA
2100705	2100706	BCG_2406	BCG_2407	cysH		TRUE	0.946	-3.000	0.010	1.000		NA
2100706	2100707	BCG_2407	BCG_2408		ggtB	FALSE	0.422	37.000	0.069	1.000		NA
2100707	2100708	BCG_2408	BCG_2409	ggtB		FALSE	0.113	131.000	0.029	NA		NA
2100708	2100709	BCG_2409	BCG_2410			FALSE	0.546	14.000	0.029	NA		NA
2100709	2100710	BCG_2410	BCG_2411		PE_PGRS41	FALSE	0.002	724.000	0.000	NA		NA
2100711	2100712	BCG_2412c	BCG_2413c	cysA1	cysW	TRUE	0.896	17.000	0.087	1.000	Y	NA
2100712	2100713	BCG_2413c	BCG_2414c	cysW	cysT	TRUE	0.991	-3.000	0.177	0.001	N	NA
2100713	2100714	BCG_2414c	BCG_2415c	cysT	subI	TRUE	0.990	-3.000	0.188	0.003	N	NA
2100718	2100719	BCG_2419c	BCG_2420c	lppR	lepA	TRUE	0.915	-3.000	0.004	NA		NA
2100722	2100723	BCG_2423	BCG_2424		PE24	FALSE	0.002	593.000	0.000	NA		NA
2100724	2100725	BCG_2425c	BCG_2426c			TRUE	0.933	0.000	0.089	NA		NA
2100725	2100726	BCG_2426c	BCG_2427c			TRUE	0.918	0.000	0.044	NA		NA
2100728	2100729	BCG_2429c	BCG_2430c			FALSE	0.449	31.000	0.163	NA		NA
2100729	2100730	BCG_2430c	BCG_2431c			TRUE	0.631	15.000	0.130	NA		NA
2100730	2100731	BCG_2431c	BCG_2432c			FALSE	0.008	340.000	0.000	1.000		NA
2100731	2100732	BCG_2432c	BCG_2433c			FALSE	0.070	122.000	0.000	NA		NA
2100732	2100733	BCG_2433c	BCG_2434c			TRUE	0.598	81.000	0.484	NA		NA
2100733	2100734	BCG_2434c	BCG_2435c			TRUE	0.820	-10.000	0.245	1.000		NA
2100734	2100735	BCG_2435c	BCG_2436c			TRUE	0.939	-3.000	0.045	NA		NA
2100735	2100736	BCG_2436c	BCG_2437c		nadD	TRUE	0.969	-3.000	0.221	NA		NA
2100737	2100738	BCG_2438	BCG_2439			FALSE	0.011	242.000	0.000	NA		NA
2100739	2100740	BCG_2440c	BCG_2441c			TRUE	0.843	14.000	0.000	0.008		NA
2100740	2100741	BCG_2441c	BCG_2442c			FALSE	0.118	89.000	0.000	NA		NA
2100741	2100742	BCG_2442c	BCG_2443c			TRUE	0.991	0.000	0.862	NA		NA
2100742	2100743	BCG_2443c	BCG_2444c		proA	FALSE	0.419	27.000	0.019	1.000		NA
2100743	2100744	BCG_2444c	BCG_2445c	proA		FALSE	0.121	83.000	0.000	NA		NA
2100744	2100745	BCG_2445c	BCG_2446c			TRUE	0.797	1.000	0.000	NA		NA
2100746	2100747	BCG_2447	BCG_2448	ahpC	ahpD	FALSE	0.519	26.000	0.095	1.000		NA
2100748	2100749	BCG_2449c	BCG_2450c	PPE41	PE25	FALSE	0.152	47.000	0.000	NA		NA
2100749	2100750	BCG_2450c	BCG_2451c	PE25		FALSE	0.028	171.000	0.000	NA		NA
2100750	2100751	BCG_2451c	BCG_2452c			TRUE	0.876	-3.000	0.000	NA		NA
2100751	2100752	BCG_2452c	BCG_2453c			FALSE	0.327	-19.000	0.000	NA		NA
2100752	2100753	BCG_2453c	BCG_2454c			TRUE	0.996	-3.000	0.667	0.039	N	NA
2100754	2100755	BCG_2455	BCG_2456	rbsK		FALSE	0.007	232.000	0.000	1.000	N	NA
2100758	2100759	BCG_2459c	BCG_2460c	proB	obg	TRUE	0.965	0.000	0.206	1.000		NA
2100759	2100760	BCG_2460c	BCG_2461c	obg	rpmA	FALSE	0.549	86.000	0.335	1.000		NA
2100760	2100761	BCG_2461c	BCG_2462c	rpmA	rplU	TRUE	0.989	15.000	0.667	0.014	Y	NA
2100763	2100764	BCG_2464c	BCG_2465c	rne	ndkA	FALSE	0.003	330.000	0.000	1.000	N	NA
2100764	2100765	BCG_2465c	BCG_2466c	ndkA		FALSE	0.247	43.000	0.014	NA		NA
2100765	2100766	BCG_2466c	BCG_2467c		folC	TRUE	0.965	-3.000	0.188	NA		NA
2100766	2100767	BCG_2467c	BCG_2468c	folC	valS	TRUE	0.986	-3.000	0.208	0.073	N	NA
2100767	2100768	BCG_2468c	BCG_2469c	valS		FALSE	0.222	88.000	0.041	NA		NA
2100768	2100769	BCG_2469c	BCG_2470c		rpfE	FALSE	0.487	90.000	0.333	NA		NA
2100771	2100772	BCG_2472c	BCG_2473c		mobA	FALSE	0.243	24.000	0.000	NA		NA
2100772	2100773	BCG_2473c	BCG_2474c	mobA		TRUE	0.857	2.000	0.053	1.000	N	NA
2100773	2100774	BCG_2474c	BCG_2475c			TRUE	0.999	-3.000	0.832	0.001	Y	NA
2100774	2100775	BCG_2475c	BCG_2476c			FALSE	0.007	232.000	0.000	1.000	N	NA
2100775	2100776	BCG_2476c	BCG_2477c		clpX	FALSE	0.334	16.000	0.002	1.000	N	NA
2100777	2100778	BCG_2478	BCG_2479	mmuM		FALSE	0.016	167.000	0.000	1.000	N	NA
2100779	2100780	BCG_2480c	BCG_2481c	clpP2	clpP1	TRUE	0.999	-3.000	0.341	0.001	Y	NA
2100780	2100781	BCG_2481c	BCG_2482c	clpP1	tig	FALSE	0.559	117.000	0.018	1.000	Y	NA
2100781	5582100	BCG_2482c	BCG_t28	tig	tRNA-Pro	FALSE	0.165	40.000	0.000	NA		NA
5582101	2100784	BCG_t29	BCG_2483	tRNA-Gly	lipP	FALSE	0.157	44.000	0.000	NA		NA
2100785	2100786	BCG_2484c	BCG_2485c		rpiB	TRUE	0.930	6.000	0.398	1.000	N	NA
2100786	2100787	BCG_2485c	BCG_2486c	rpiB		FALSE	0.367	102.000	0.182	1.000		NA
2100789	2100790	BCG_2488c	BCG_2489c			FALSE	0.014	220.000	0.000	NA		NA
2100791	2100792	BCG_2490	BCG_2491	glbO	aglA	TRUE	0.943	0.000	0.055	1.000		NA
2100792	2100793	BCG_2491	BCG_2492	aglA		FALSE	0.131	68.000	0.000	NA		NA
2100793	2100794	BCG_2492	BCG_2493			TRUE	0.752	3.000	0.000	NA		NA
2100795	2100796	BCG_2494c	BCG_2495c			TRUE	0.923	6.000	0.305	NA		NA
2100796	2100797	BCG_2495c	BCG_2496c		gdh	TRUE	0.959	-3.000	0.153	NA		NA
2100797	2100798	BCG_2496c	BCG_2497c	gdh		FALSE	0.233	104.000	0.018	1.000		NA
2100798	2100799	BCG_2497c	BCG_2498			FALSE	0.311	81.000	0.053	1.000		NA
2100799	2100800	BCG_2498	BCG_2499c			FALSE	0.002	609.000	0.000	NA		NA
2100800	2100801	BCG_2499c	BCG_2500c		plsB2	FALSE	0.340	16.000	0.000	NA		NA
2100801	2100802	BCG_2500c	BCG_2501c	plsB2	plsC	TRUE	0.996	-3.000	0.044	0.089	Y	NA
2100802	2100803	BCG_2501c	BCG_2502c	plsC		TRUE	0.939	-3.000	0.044	NA		NA
2100803	2100804	BCG_2502c	BCG_2503c		lipQ	FALSE	0.062	229.000	0.250	NA		NA
5582102	2100806	BCG_t30	BCG_2504	tRNA-Arg	echA14	FALSE	0.108	101.000	0.000	NA		NA
2100807	2100808	BCG_2505c	BCG_2506c	PE_PGRS42d	PE_PGRS42ab	FALSE	0.186	-324.000	0.000	NA		NA
2100808	2100809	BCG_2506c	BCG_2507c	PE_PGRS42ab		FALSE	0.122	82.000	0.000	NA		NA
2100809	2100810	BCG_2507c	BCG_2508c			FALSE	0.247	-34.000	0.000	NA		NA
2100810	2100811	BCG_2508c	BCG_2509c		PE_PGRS43b	FALSE	0.090	109.000	0.000	NA		NA
2100811	2100812	BCG_2509c	BCG_2510c	PE_PGRS43b	PE_PGRS43a	FALSE	0.117	92.000	0.000	NA		NA
2100813	2100814	BCG_2511	BCG_2512			FALSE	0.419	-10.000	0.000	NA		NA
2100814	2100815	BCG_2512	BCG_2513			FALSE	0.145	53.000	0.000	NA		NA
2100815	2100816	BCG_2513	BCG_2514			TRUE	0.648	6.000	0.000	NA		NA
2100817	2100818	BCG_2515c	BCG_2516c	pdhC	pdhB	TRUE	0.999	-3.000	1.000	0.089	Y	NA
2100818	2100819	BCG_2516c	BCG_2517c	pdhB	pdhA	TRUE	0.997	11.000	1.000	0.001	Y	NA
2100819	2100820	BCG_2517c	BCG_2518c	pdhA	citE	FALSE	0.018	259.000	0.083	1.000	N	NA
2100820	2100821	BCG_2518c	BCG_2519c	citE		TRUE	0.976	-3.000	0.326	1.000	N	NA
2100821	2100822	BCG_2519c	BCG_2520c		fadE19	TRUE	0.993	-3.000	0.117	1.000	Y	NA
2100822	2100823	BCG_2520c	BCG_2521c	fadE19	accA1	TRUE	0.980	5.000	0.190	1.000	Y	NA
2100823	2100824	BCG_2521c	BCG_2522c	accA1	accD1	TRUE	0.978	5.000	0.136	1.000	Y	NA
2100824	2100825	BCG_2522c	BCG_2523c	accD1	scoB	TRUE	0.990	-3.000	0.006	1.000	Y	NA
2100825	2100826	BCG_2523c	BCG_2524c	scoB	scoA	TRUE	0.999	-3.000	0.538	0.001	Y	NA
2100826	2100827	BCG_2524c	BCG_2525c	scoA	fadD35	TRUE	0.828	83.000	0.054	0.089	Y	NA
2100828	2100829	BCG_2526	BCG_2527			FALSE	0.335	79.000	0.167	NA		NA
2100833	5582103	BCG_2531	BCG_t31	orn	tRNA-His	FALSE	0.148	50.000	0.000	NA		NA
2100836	2100837	BCG_2533	BCG_2534			FALSE	0.014	221.000	0.000	NA		NA
2100838	2100839	BCG_2535c	BCG_2536c			TRUE	0.970	6.000	0.726	NA		NA
2100839	2100840	BCG_2536c	BCG_2537c			FALSE	0.118	119.000	0.000	1.000		NA
2100840	2100841	BCG_2537c	BCG_2538c			TRUE	0.973	-3.000	0.250	NA		NA
2100841	2100842	BCG_2538c	BCG_2539c		lppS	FALSE	0.004	348.000	0.000	NA		NA
5582104	2100844	BCG_t32	BCG_2540	tRNA-Lys	PE26	FALSE	0.014	219.000	0.000	NA		NA
2100847	2100848	BCG_2543c	BCG_2544c		acpS	TRUE	0.914	-3.000	0.036	1.000	N	NA
2100848	2100849	BCG_2544c	BCG_2545c	acpS	fas	FALSE	0.550	193.000	0.138	0.003	Y	NA
2100849	2100850	BCG_2545c	BCG_2546c	fas		FALSE	0.002	520.000	0.000	NA		NA
2100851	2100852	BCG_2547	BCG_2548			TRUE	0.876	-3.000	0.000	NA		NA
2100855	2100856	BCG_2551c	BCG_2552c			TRUE	0.876	-3.000	0.000	NA		NA
2100856	2100857	BCG_2552c	BCG_2553c			FALSE	0.290	31.000	0.000	1.000		NA
2100857	2100858	BCG_2553c	BCG_2554c			FALSE	0.322	72.000	0.143	NA		NA
2100858	2100859	BCG_2554c	BCG_2555c		nusB	TRUE	0.887	0.000	0.004	NA		NA
2100859	2100860	BCG_2555c	BCG_2556c	nusB	efp	TRUE	0.860	3.000	0.078	1.000	N	NA
2100860	2100861	BCG_2556c	BCG_2557c	efp	pepQ	TRUE	0.755	10.000	0.160	1.000	N	NA
2100863	2100864	BCG_2559c	BCG_2560c	aroD	aroB	TRUE	0.997	-3.000	0.052	0.002	Y	NA
2100864	2100865	BCG_2560c	BCG_2561c	aroB	aroK	TRUE	0.993	-3.000	0.147	1.000	Y	NA
2100865	2100866	BCG_2561c	BCG_2562c	aroK	aroF	TRUE	0.977	4.000	0.041	1.000	Y	NA
2100867	2100868	BCG_2563	BCG_2564			FALSE	0.006	296.000	0.000	NA		NA
2100868	2100869	BCG_2564	BCG_2565		lppA	FALSE	0.066	127.000	0.000	NA		NA
2100869	2100870	BCG_2565	BCG_2566	lppA	lprR	TRUE	0.876	-3.000	0.000	NA		NA
2100870	2100871	BCG_2566	BCG_2567	lprR	lppB	TRUE	0.876	-3.000	0.000	NA		NA
2100871	2100872	BCG_2567	BCG_2568	lppB		TRUE	0.876	-3.000	0.000	NA		NA
2100872	2100873	BCG_2568	BCG_2569			FALSE	0.117	93.000	0.000	NA		NA
2100873	2100874	BCG_2569	BCG_2570			FALSE	0.167	39.000	0.000	NA		NA
2100874	2100875	BCG_2570	BCG_2571			TRUE	0.876	-3.000	0.000	NA		NA
2100876	2100877	BCG_2572c	BCG_2573c			TRUE	0.876	-3.000	0.000	NA		NA
2100877	2100878	BCG_2573c	BCG_2574c			FALSE	0.006	411.000	0.000	1.000		NA
2100878	2100879	BCG_2574c	BCG_2575c		aroE	TRUE	0.674	12.000	0.022	1.000		NA
2100879	2100880	BCG_2575c	BCG_2576c	aroE		TRUE	0.870	-22.000	0.667	NA		NA
2100880	2100881	BCG_2576c	BCG_2577c			TRUE	0.668	-7.000	0.039	NA		NA
2100881	2100882	BCG_2577c	BCG_2578c		alaS	TRUE	0.897	1.000	0.103	1.000	N	NA
2100882	2100883	BCG_2578c	BCG_2579c	alaS		FALSE	0.182	91.000	0.011	NA		NA
2100884	2100885	BCG_2580	BCG_2581			FALSE	0.120	85.000	0.000	NA		NA
2100887	2100888	BCG_2583	BCG_2584			FALSE	0.004	357.000	0.000	NA		NA
2100888	2100889	BCG_2584	BCG_2585			FALSE	0.075	143.000	0.000	1.000		NA
2100889	2100890	BCG_2585	BCG_2586		glnQ	TRUE	0.621	3.000	0.000	1.000	N	NA
2100890	2100891	BCG_2586	BCG_2587	glnQ		FALSE	0.013	277.000	0.000	1.000		NA
2100891	2100892	BCG_2587	BCG_2588			FALSE	0.485	11.000	0.000	NA		NA
2100892	2100893	BCG_2588	BCG_2589			FALSE	0.330	26.000	0.014	NA		NA
2100893	2100894	BCG_2589	BCG_2590			TRUE	0.988	0.000	0.667	NA		NA
2100895	2100896	BCG_2591c	BCG_2592c			TRUE	0.679	-7.000	0.046	NA		NA
2100898	2100899	BCG_2594c	BCG_2595c		aspS	TRUE	0.617	7.000	0.000	NA		NA
2100900	2100901	BCG_2596	BCG_2597			FALSE	0.486	23.000	0.098	NA		NA
2100901	2100902	BCG_2597	BCG_2598			FALSE	0.314	30.000	0.021	NA		NA
2100907	2100908	BCG_2603c	BCG_2604c	hisS		TRUE	0.957	-3.000	0.051	1.000		NA
2100910	2100911	BCG_2606c	BCG_2607c	relA	apt	FALSE	0.287	31.000	0.051	1.000	N	NA
2100911	2100912	BCG_2607c	BCG_2608c	apt		FALSE	0.133	104.000	0.023	1.000	N	NA
2100912	2100913	BCG_2608c	BCG_2609c		secF	TRUE	0.792	6.000	0.083	1.000	N	NA
2100913	2100914	BCG_2609c	BCG_2610c	secF	secD	TRUE	0.997	4.000	0.336	0.001	Y	NA
2100914	2100915	BCG_2610c	BCG_2611c	secD		TRUE	0.586	110.000	0.062	NA	Y	NA
2100916	2100917	BCG_2612	BCG_2613	gabT	fadD9	FALSE	0.215	162.000	0.444	1.000	N	NA
2100917	2100918	BCG_2613	BCG_2614	fadD9	PE_PGRS44	FALSE	0.027	174.000	0.000	NA		NA
2100919	2100920	BCG_2615c	BCG_2616c	ruvB	ruvA	TRUE	0.999	-3.000	0.549	0.002	Y	NA
2100920	2100921	BCG_2616c	BCG_2617c	ruvA	ruvC	TRUE	0.999	-3.000	0.451	0.007	Y	NA
2100922	2100923	BCG_2618	BCG_2619			TRUE	0.876	-3.000	0.000	NA		NA
2100923	2100924	BCG_2619	BCG_2620			FALSE	0.014	217.000	0.000	NA		NA
2100924	2100925	BCG_2620	BCG_2621			TRUE	0.904	11.000	0.455	NA		NA
2100925	2100926	BCG_2621	BCG_2622			TRUE	0.972	-3.000	0.242	NA		NA
2100926	2100927	BCG_2622	BCG_2623			TRUE	0.575	82.000	0.444	NA		NA
2100927	2100928	BCG_2623	BCG_2624			TRUE	0.648	6.000	0.000	NA		NA
2100928	2100929	BCG_2624	BCG_2625		speE	TRUE	0.946	-3.000	0.065	NA		NA
2100929	2100930	BCG_2625	BCG_2626	speE		FALSE	0.136	111.000	0.000	1.000		NA
2100930	2100931	BCG_2626	BCG_2627			FALSE	0.379	-13.000	0.000	NA		NA
2100932	2100933	BCG_2628c	BCG_2629c			FALSE	0.124	133.000	0.055	NA		NA
2100933	2100934	BCG_2629c	BCG_2630c		tesB2	FALSE	0.510	8.000	0.027	NA	N	NA
2100934	2100935	BCG_2630c	BCG_2631c	tesB2		FALSE	0.235	29.000	0.014	1.000	N	NA
2100936	2100937	BCG_2632	BCG_2633	pdxH	PPE42	FALSE	0.002	174.000	0.000	NA	N	NA
2100938	2100939	BCG_2634c	BCG_2635c		pimA	TRUE	0.852	0.000	0.010	1.000	N	NA
2100939	2100940	BCG_2635c	BCG_2636c	pimA		TRUE	0.988	11.000	0.831	1.000	Y	NA
2100940	2100941	BCG_2636c	BCG_2637c		pgsA1	TRUE	0.991	-3.000	0.737	1.000	N	NA
2100941	2100942	BCG_2637c	BCG_2638c	pgsA1		TRUE	0.946	-3.000	0.140	1.000	N	NA
2100942	2100943	BCG_2638c	BCG_2639c		thrS	TRUE	0.768	-7.000	0.208	1.000	N	NA
2100945	2100946	BCG_2641c	BCG_2642c	PE_PGRS45b	PE_PGRS45a	FALSE	0.397	-12.000	0.000	NA		NA
2100950	2100951	BCG_2646c	BCG_2647c			TRUE	0.646	13.000	0.090	NA		NA
2100951	2100952	BCG_2647c	BCG_2648c			TRUE	0.956	-3.000	0.129	NA		NA
2100953	2100954	BCG_2649	BCG_2650		TB31.7	FALSE	0.123	136.000	0.013	1.000		NA
2100955	2100956	BCG_2651c	BCG_2652c			FALSE	0.490	15.000	0.000	1.000		NA
2100956	2100957	BCG_2652c	BCG_2653c			FALSE	0.217	59.000	0.000	1.000		NA
2100957	2100958	BCG_2653c	BCG_2654c			FALSE	0.002	514.000	0.000	NA		NA
2100959	2100960	BCG_2655	BCG_2656			FALSE	0.004	347.000	0.000	NA		NA
2100960	2100961	BCG_2656	BCG_2657			TRUE	0.778	2.000	0.000	NA		NA
2100961	2100962	BCG_2657	BCG_2658			FALSE	0.230	139.000	0.279	NA		NA
2100963	2100964	BCG_2659c	BCG_2660c			FALSE	0.044	145.000	0.000	NA		NA
2100964	2100965	BCG_2660c	BCG_2661c		PE_PGRS46	FALSE	0.007	285.000	0.000	NA		NA
2100966	2100967	BCG_2662	BCG_2663			TRUE	0.797	1.000	0.000	NA		NA
2100967	2100968	BCG_2663	BCG_2664		dedA	FALSE	0.019	196.000	0.000	NA		NA
2100968	2100969	BCG_2664	BCG_2665	dedA		FALSE	0.030	163.000	0.000	NA		NA
2100970	2100971	BCG_2666c	BCG_2667c			FALSE	0.116	120.000	0.000	1.000		NA
2100972	2100973	BCG_2668	BCG_2669	cadI		FALSE	0.323	136.000	0.400	NA		NA
2100973	2100974	BCG_2669	BCG_2670		arsC	TRUE	0.988	-3.000	0.600	1.000	N	NA
2100975	5582105	BCG_2671c	BCG_t33		tRNA-Val	FALSE	0.002	647.000	0.000	NA		NA
5582106	5582107	BCG_t34	BCG_t35	tRNA-Gly	tRNA-Cys	FALSE	0.198	30.000	0.000	NA		NA
5582107	5582108	BCG_t35	BCG_t36	tRNA-Cys	tRNA-Val	FALSE	0.317	17.000	0.000	NA		NA
2100980	2100981	BCG_2672c	BCG_2673c			TRUE	0.876	-3.000	0.000	NA		NA
2100982	2100983	BCG_2674	BCG_2675			FALSE	0.112	99.000	0.000	NA		NA
2100983	2100984	BCG_2675	BCG_2676			FALSE	0.485	11.000	0.000	NA		NA
2100986	2100987	BCG_2678	BCG_2679			FALSE	0.118	91.000	0.000	NA		NA
2100987	2100988	BCG_2679	BCG_2680		clpX'	FALSE	0.377	22.000	0.000	1.000		NA
2100988	2100989	BCG_2680	BCG_2681	clpX'		FALSE	0.321	79.000	0.150	NA		NA
2100989	2100990	BCG_2681	BCG_2682			FALSE	0.365	29.000	0.051	NA		NA
2100992	2100993	BCG_2684	BCG_2685	ribD		FALSE	0.463	67.000	0.275	NA		NA
2100993	2100994	BCG_2685	BCG_2686			TRUE	0.766	23.000	0.444	NA		NA
2100994	2100995	BCG_2686	BCG_2687			FALSE	0.113	169.000	0.217	NA		NA
2100996	2100997	BCG_2688c	BCG_2689c			TRUE	0.924	-3.000	0.014	NA		NA
2100997	2100998	BCG_2689c	BCG_2690c		hemY	TRUE	0.861	6.000	0.158	NA		NA
2100998	2100999	BCG_2690c	BCG_2691c	hemY	hemE	TRUE	0.998	-3.000	0.049	0.001	Y	NA
2101000	2101001	BCG_2692	BCG_2693			FALSE	0.018	262.000	0.038	NA		NA
2101001	2101002	BCG_2693	BCG_2694			TRUE	0.911	2.000	0.115	NA		NA
2101004	2101005	BCG_2696	BCG_2697		arsA	TRUE	0.791	5.000	0.000	1.000		NA
2101005	2101006	BCG_2697	BCG_2698	arsA	arsB1	TRUE	0.867	80.000	0.000	0.001	Y	NA
2101007	2101008	BCG_2699c	BCG_2700c			TRUE	0.963	-3.000	0.176	NA		NA
2101008	2101009	BCG_2700c	BCG_2701c			TRUE	0.970	-3.000	0.222	NA		NA
2101009	2101010	BCG_2701c	BCG_2702c			FALSE	0.008	195.000	0.004	NA	N	NA
2101010	2101011	BCG_2702c	BCG_2703c			FALSE	0.046	156.000	0.082	NA	N	NA
2101012	2101013	BCG_2704	BCG_2705	ceoB	ceoC	TRUE	0.998	-3.000	0.162	0.002	Y	NA
2101014	2101015	BCG_2706c	BCG_2707c			FALSE	0.436	31.000	0.145	NA		NA
2101017	2101018	BCG_2709c	BCG_2710c		dut	FALSE	0.282	75.000	0.078	NA		NA
2101023	2101024	BCG_2715	BCG_2716	ppgK	sigA	FALSE	0.314	180.000	0.075	1.000	Y	NA
2101024	2101025	BCG_2716	BCG_2717	sigA		FALSE	0.126	37.000	0.024	NA	N	NA
2101026	2101027	BCG_2718c	BCG_2719c			TRUE	0.876	-3.000	0.000	NA		NA
2101030	2101031	BCG_2722	BCG_2723		sigB	FALSE	0.144	176.000	0.303	NA		NA
2101031	2101032	BCG_2723	BCG_2724	sigB	ideR	TRUE	0.725	133.000	0.134	0.041	Y	NA
2101034	2101035	BCG_2726	BCG_2727	sthA		FALSE	0.024	218.000	0.000	1.000		NA
2101035	2101036	BCG_2727	BCG_2728			TRUE	0.701	59.000	0.538	1.000		NA
2101036	2101037	BCG_2728	BCG_2729			TRUE	0.763	49.000	0.280	0.037		NA
2101038	2101039	BCG_2730c	BCG_2731c			FALSE	0.209	52.000	0.005	NA		NA
2101039	2101040	BCG_2731c	BCG_2732c			FALSE	0.050	163.000	0.012	NA		NA
2101043	2101044	BCG_2735	BCG_2736			FALSE	0.222	26.000	0.000	NA		NA
2101045	2101046	BCG_2737c	BCG_2738c	fadE20	hflX	FALSE	0.113	136.000	0.003	1.000		NA
2101046	2101047	BCG_2738c	BCG_2739c	hflX	dapF	FALSE	0.561	17.000	0.025	1.000		NA
2101047	2101048	BCG_2739c	BCG_2740c	dapF	miaA	FALSE	0.357	25.000	0.062	1.000	N	NA
2101048	2101049	BCG_2740c	BCG_2741c	miaA		TRUE	0.938	-3.000	0.043	NA		NA
2101049	2101050	BCG_2741c	BCG_2742c			FALSE	0.090	109.000	0.000	NA		NA
2101051	2101052	BCG_2743	BCG_2744			TRUE	0.590	8.000	0.000	NA		NA
2101053	2101054	BCG_2745c	BCG_2746c			TRUE	0.931	-3.000	0.024	NA		NA
2101056	2101057	BCG_2748c	BCG_2749c		recX	FALSE	0.535	10.000	0.000	NA		NA
2101057	2101058	BCG_2749c	BCG_2750c	recX	recA	TRUE	0.716	-34.000	0.296	1.000		NA
2101060	2101061	BCG_2752c	BCG_2753c			TRUE	0.756	11.000	0.152	NA		NA
2101062	2101063	BCG_2754	BCG_2755	ephG	PE_PGRS47a	FALSE	0.012	232.000	0.000	NA		NA
2101063	2101064	BCG_2755	BCG_2756	PE_PGRS47a	PE_PGRS47	FALSE	0.434	12.000	0.000	NA		NA
2101065	2101066	BCG_2757c	BCG_2758c			FALSE	0.270	21.000	0.000	NA		NA
2101066	2101067	BCG_2758c	BCG_2759c			FALSE	0.342	72.000	0.167	NA		NA
2101067	2101068	BCG_2759c	BCG_2760c		35kd_ag	TRUE	0.725	19.000	0.306	NA		NA
2101068	2101069	BCG_2760c	BCG_2761c	35kd_ag		FALSE	0.263	130.000	0.260	NA		NA
2101069	2101070	BCG_2761c	BCG_2762c		pgsA3	FALSE	0.262	71.000	0.006	1.000		NA
2101073	2101074	BCG_2765	BCG_2766			TRUE	0.992	-3.000	0.250	0.043		NA
2101074	2101075	BCG_2766	BCG_2767			TRUE	0.992	4.000	0.600	NA	Y	NA
2101076	2101077	BCG_2768c	BCG_2769c		dapA	TRUE	0.782	31.000	0.550	1.000		NA
2101077	2101078	BCG_2769c	BCG_2770c	dapA		FALSE	0.185	69.000	0.037	1.000	N	NA
2101078	2101079	BCG_2770c	BCG_2771c		hsdS'	FALSE	0.018	244.000	0.000	1.000		NA
2101079	2101080	BCG_2771c	BCG_2772c	hsdS'	hsdM	TRUE	0.980	-3.000	0.000	0.047		NA
2101080	2101081	BCG_2772c	BCG_2773c	hsdM		FALSE	0.119	87.000	0.000	NA		NA
2101081	2101082	BCG_2773c	BCG_2774c			TRUE	0.876	-3.000	0.000	NA		NA
2101082	2101083	BCG_2774c	BCG_2775c			FALSE	0.222	26.000	0.000	NA		NA
2101083	2101084	BCG_2775c	BCG_2776c			TRUE	0.992	-3.000	0.750	NA		NA
2101084	2101085	BCG_2776c	BCG_2777c		hsdS	FALSE	0.535	10.000	0.000	NA		NA
2101085	2101086	BCG_2777c	BCG_2778c	hsdS		TRUE	0.876	-3.000	0.000	NA		NA
2101086	2101087	BCG_2778c	BCG_2779c			FALSE	0.340	16.000	0.000	NA		NA
2101087	2101088	BCG_2779c	BCG_2780c		dfrA	FALSE	0.129	74.000	0.000	NA		NA
2101088	2101089	BCG_2780c	BCG_2781c	dfrA	thyA	FALSE	0.438	71.000	0.295	1.000	N	NA
2101091	2101092	BCG_2783c	BCG_2784c			TRUE	0.876	-3.000	0.000	NA		NA
2101092	2101093	BCG_2784c	BCG_2785c		PPE43	FALSE	0.027	174.000	0.000	NA		NA
2101093	2101094	BCG_2785c	BCG_2786c	PPE43	PE27	TRUE	0.786	80.000	1.000	NA		NA
2101094	2101095	BCG_2786c	BCG_2787c	PE27	PPE44	FALSE	0.005	324.000	0.000	NA		NA
2101095	2101096	BCG_2787c	BCG_2788c	PPE44		FALSE	0.069	124.000	0.000	NA		NA
2101096	2101097	BCG_2788c	BCG_2789c			FALSE	0.119	86.000	0.000	NA		NA
2101097	2101098	BCG_2789c	BCG_2790c		dapB	TRUE	0.682	12.000	0.027	1.000		NA
2101098	2101099	BCG_2790c	BCG_2791c	dapB		FALSE	0.485	11.000	0.000	NA		NA
2101101	2101102	BCG_2793c	BCG_2794c			FALSE	0.023	182.000	0.000	NA		NA
2101102	2101103	BCG_2794c	BCG_2795c			FALSE	0.245	158.000	0.429	NA		NA
2101103	2101104	BCG_2795c	BCG_2796c			FALSE	0.377	32.000	0.074	NA		NA
2101105	2101106	BCG_2797	BCG_2798	ald_a	aldb	TRUE	0.989	-3.000	0.000	0.001		NA
2101107	2101108	BCG_2799c	BCG_2800c		pepR	FALSE	0.280	61.000	0.010	1.000		NA
2101108	2101109	BCG_2800c	BCG_2801c	pepR	gpsI	TRUE	0.663	-22.000	0.171	1.000		NA
2101109	2101110	BCG_2801c	BCG_2802c	gpsI	lppU	FALSE	0.004	354.000	0.000	NA		NA
2101110	2101111	BCG_2802c	BCG_2803c	lppU	rpsO	FALSE	0.504	13.000	0.004	NA		NA
2101111	2101112	BCG_2803c	BCG_2804c	rpsO	ribF	FALSE	0.077	157.000	0.119	1.000	N	NA
2101113	2101114	BCG_2805	BCG_2806		sirR	FALSE	0.069	85.000	0.000	1.000	N	NA
2101115	2101116	BCG_2807c	BCG_2808c	fadE21	ltp1	TRUE	0.810	26.000	0.011	1.000	Y	NA
2101116	2101117	BCG_2808c	BCG_2809c	ltp1		FALSE	0.016	33.000	0.000	NA	N	NA
2101117	2101118	BCG_2809c	BCG_2810c			TRUE	0.982	0.000	0.000	NA	Y	NA
2101118	2101119	BCG_2810c	BCG_2811c		truB	FALSE	0.010	202.000	0.000	1.000	N	NA
2101119	2101120	BCG_2811c	BCG_2812c	truB		TRUE	0.913	-3.000	0.034	1.000	N	NA
2101120	2101121	BCG_2812c	BCG_2813c			TRUE	0.974	-3.000	0.203	1.000		NA
2101121	2101122	BCG_2813c	BCG_2814c		lppV	FALSE	0.117	145.000	0.111	NA		NA
2101122	2101123	BCG_2814c	BCG_2815c	lppV		TRUE	0.890	0.000	0.006	NA		NA
2101123	2101124	BCG_2815c	BCG_2816c			TRUE	0.804	4.000	0.006	NA		NA
2101125	2101126	BCG_2817	BCG_2818			TRUE	0.766	19.000	0.375	NA		NA
2101127	2101128	BCG_2819c	BCG_2820c			FALSE	0.009	257.000	0.000	NA		NA
2101131	2101132	BCG_2823	BCG_2824			TRUE	0.876	-3.000	0.000	NA		NA
2101132	2101133	BCG_2824	BCG_2825			FALSE	0.018	199.000	0.000	NA		NA
2101133	2101134	BCG_2825	BCG_2826			FALSE	0.012	234.000	0.000	NA		NA
2101134	2101135	BCG_2826	BCG_2827			FALSE	0.100	105.000	0.000	NA		NA
2101137	2101138	BCG_2829	BCG_2830			TRUE	0.671	71.000	0.600	NA		NA
2101138	2101139	BCG_2830	BCG_2831			TRUE	0.966	-3.000	0.125	1.000		NA
2101140	2101141	BCG_2832c	BCG_2833c			TRUE	0.710	99.000	0.308	0.046		NA
2101141	2101142	BCG_2833c	BCG_2834c			FALSE	0.003	2254.000	0.000	1.000		NA
2101142	2101143	BCG_2834c	BCG_2835c			TRUE	0.990	1.000	0.280	NA	Y	NA
2101143	2101144	BCG_2835c	BCG_2836c			FALSE	0.400	13.000	0.000	NA		NA
2101144	2101145	BCG_2836c	BCG_2837c			FALSE	0.233	25.000	0.000	NA		NA
2101145	2101146	BCG_2837c	BCG_2838c			TRUE	0.942	-3.000	0.052	NA		NA
2101146	2101147	BCG_2838c	BCG_2839c			TRUE	0.997	-3.000	0.597	NA	Y	NA
2101147	2101148	BCG_2839c	BCG_2840c			TRUE	0.956	-19.000	0.547	NA	Y	NA
2101148	2101149	BCG_2840c	BCG_2841c			TRUE	0.920	10.000	0.453	NA		NA
2101149	2101150	BCG_2841c	BCG_2842c			TRUE	0.982	-3.000	0.347	NA		NA
2101150	2101151	BCG_2842c	BCG_2843c			TRUE	0.953	-3.000	0.102	NA		NA
2101151	2101152	BCG_2843c	BCG_2844c			FALSE	0.025	178.000	0.000	NA		NA
2101152	2101153	BCG_2844c	BCG_2845c			FALSE	0.028	170.000	0.000	NA		NA
2101153	2101154	BCG_2845c	BCG_2846c			TRUE	0.752	3.000	0.000	NA		NA
2101154	2101155	BCG_2846c	BCG_2847c			FALSE	0.006	305.000	0.000	NA		NA
2101155	2101156	BCG_2847c	BCG_2848c			TRUE	0.876	-3.000	0.000	NA		NA
2101156	2101157	BCG_2848c	BCG_2849c			FALSE	0.270	21.000	0.000	NA		NA
2101157	2101158	BCG_2849c	BCG_2850c			TRUE	0.876	-3.000	0.000	NA		NA
2101160	2101161	BCG_2852c	BCG_2853A	ugpC	ugpBb	FALSE	0.490	-7.000	0.000	NA		NA
2101161	2101162	BCG_2853A	BCG_2853c	ugpBb	ugpBa	TRUE	0.797	1.000	0.000	NA		NA
2101162	2101163	BCG_2853c	BCG_2854c	ugpBa	ugpE	TRUE	0.989	3.000	0.467	0.017		NA
2101163	2101164	BCG_2854c	BCG_2855c	ugpE	ugpA	TRUE	0.998	-3.000	0.389	0.017	Y	NA
2101164	2101165	BCG_2855c	BCG_2856c	ugpA	dinF	FALSE	0.447	87.000	0.006	0.035	N	NA
2101165	2101166	BCG_2856c	BCG_2857c	dinF		TRUE	0.839	7.000	0.054	1.000		NA
2101166	2101167	BCG_2857c	BCG_2858c		rbfA	TRUE	0.643	-25.000	0.173	1.000		NA
2101167	2101168	BCG_2858c	BCG_2859c	rbfA	infB	TRUE	0.996	0.000	0.530	1.000	Y	NA
2101168	2101169	BCG_2859c	BCG_2860c	infB		FALSE	0.214	86.000	0.171	NA	N	NA
2101169	2101170	BCG_2860c	BCG_2861c		nusA	TRUE	0.663	127.000	0.323	NA	Y	NA
2101170	2101171	BCG_2861c	BCG_2862c	nusA		TRUE	0.993	-3.000	0.759	NA		NA
2101172	2101173	BCG_2863	BCG_2864			TRUE	0.957	-3.000	0.139	NA		NA
2101174	2101175	BCG_2865c	BCG_2866c	proS	efpA	FALSE	0.236	89.000	0.004	1.000		NA
2101175	2101176	BCG_2866c	BCG_2867c	efpA	cysG	TRUE	0.823	23.000	0.156	0.017		NA
2101176	2101177	BCG_2867c	BCG_2868c	cysG	cobB	FALSE	0.134	277.000	0.145	1.000	Y	NA
2101177	2101178	BCG_2868c	BCG_2869c	cobB	cobO	TRUE	0.996	0.000	0.114	0.007	Y	NA
2101178	2101179	BCG_2869c	BCG_2870c	cobO		TRUE	0.931	21.000	0.057	0.065	Y	NA
2101179	2101180	BCG_2870c	BCG_2871c			TRUE	0.983	-3.000	0.314	1.000		NA
2101180	2101181	BCG_2871c	BCG_2872c		mqo	FALSE	0.392	59.000	0.119	1.000		NA
2101182	2101183	BCG_2873	BCG_2874	PE_PGRS48		FALSE	0.173	37.000	0.000	NA		NA
2101183	2101184	BCG_2874	BCG_2875		mtr	TRUE	0.770	13.000	0.341	NA	N	NA
2101184	2101185	BCG_2875	BCG_2876	mtr	nicT	FALSE	0.151	100.000	0.030	1.000	N	NA
2101185	2101186	BCG_2876	BCG_2877	nicT		FALSE	0.132	66.000	0.000	NA		NA
2101186	2101187	BCG_2877	BCG_2878			FALSE	0.434	12.000	0.000	NA		NA
2101188	2101189	BCG_2879c	BCG_2880c		aldC	TRUE	0.997	-3.000	0.839	0.039	N	NA
2101189	2101190	BCG_2880c	BCG_2881c	aldC		TRUE	0.987	-3.000	0.419	1.000		NA
2101190	2101191	BCG_2881c	BCG_2882c		glnA4	TRUE	0.681	-19.000	0.157	1.000		NA
2101191	2101192	BCG_2882c	BCG_2883c	glnA4	mapB	FALSE	0.018	160.000	0.000	1.000	N	NA
2101192	2101193	BCG_2883c	BCG_2884c	mapB		FALSE	0.290	42.000	0.042	NA		NA
2101196	2101197	BCG_2887	BCG_2888			TRUE	0.965	4.000	0.000	NA	Y	NA
2101198	2101199	BCG_2889c	BCG_2890c		gcpE	FALSE	0.304	56.000	0.018	1.000		NA
2101199	2101200	BCG_2890c	BCG_2891c	gcpE		FALSE	0.478	17.000	0.072	1.000	N	NA
2101200	2101201	BCG_2891c	BCG_2892c		dxr	TRUE	0.750	8.000	0.088	1.000	N	NA
2101202	2101203	BCG_2893	BCG_2894			FALSE	0.379	-13.000	0.000	NA		NA
2101203	2101204	BCG_2894	BCG_2895		mpb83	FALSE	0.125	80.000	0.000	NA		NA
2101204	2101205	BCG_2895	BCG_2896	mpb83	dipZ	FALSE	0.004	280.000	0.000	1.000	N	NA
2101205	2101206	BCG_2896	BCG_2897	dipZ	mpb70	FALSE	0.066	96.000	0.000	1.000	N	NA
2101206	2101207	BCG_2897	BCG_2898	mpb70		FALSE	0.145	52.000	0.000	NA		NA
2101208	2101209	BCG_2899c	BCG_2900c		mpb53	TRUE	0.995	5.000	1.000	1.000	Y	NA
2101209	2101210	BCG_2900c	BCG_2901c	mpb53		FALSE	0.049	186.000	0.003	1.000		NA
2101210	2101211	BCG_2901c	BCG_2902c		cdsA	FALSE	0.493	23.000	0.033	1.000		NA
2101211	2101212	BCG_2902c	BCG_2903c	cdsA	frr	FALSE	0.403	23.000	0.076	1.000	N	NA
2101212	2101213	BCG_2903c	BCG_2904c	frr	pyrH	FALSE	0.263	172.000	0.626	1.000	N	NA
2101215	2101216	BCG_2906c	BCG_2907c			TRUE	0.987	-3.000	0.000	NA	Y	NA
2101218	2101219	BCG_2909c	BCG_2910c	amiC	tsf	TRUE	0.959	7.000	0.006	1.000	Y	NA
2101219	2101220	BCG_2910c	BCG_2911c	tsf	rpsB	TRUE	0.982	12.000	0.748	1.000	Y	NA
2101224	2101225	BCG_2915c	BCG_2916c	xerC	viuB	FALSE	0.057	91.000	0.008	NA	N	NA
2101225	2101226	BCG_2916c	BCG_2917c	viuB		FALSE	0.091	33.000	0.007	NA	N	NA
2101226	2101227	BCG_2917c	BCG_2918c			TRUE	0.924	-3.000	0.053	1.000	N	NA
2101227	2101228	BCG_2918c	BCG_2919c			TRUE	0.895	0.000	0.050	1.000	N	NA
2101228	2101229	BCG_2919c	BCG_2920c		fdhD	FALSE	0.010	248.000	0.003	1.000	N	NA
2101229	2101230	BCG_2920c	BCG_2921c	fdhD	fdhF	TRUE	0.998	0.000	0.261	0.000	Y	NA
2101230	2101231	BCG_2921c	BCG_2922c	fdhF		FALSE	0.141	58.000	0.000	NA		NA
2101231	2101232	BCG_2922c	BCG_2923c		rnhB	FALSE	0.294	54.000	0.067	NA		NA
2101232	2101233	BCG_2923c	BCG_2924c	rnhB	lepB	FALSE	0.451	14.000	0.024	1.000	N	NA
2101233	2101234	BCG_2924c	BCG_2925c	lepB	rplS	FALSE	0.172	58.000	0.018	1.000	N	NA
2101236	2101237	BCG_2927c	BCG_2928c	trmD	rimM	TRUE	0.994	4.000	0.672	1.000	Y	NA
2101237	2101238	BCG_2928c	BCG_2929c	rimM		TRUE	0.837	14.000	0.324	1.000		NA
2101238	2101239	BCG_2929c	BCG_2930c		rpsP	TRUE	0.935	8.000	0.385	1.000		NA
2101239	2101240	BCG_2930c	BCG_2931c	rpsP		FALSE	0.033	184.000	0.002	NA		NA
2101242	2101243	BCG_2933c	BCG_2934c			TRUE	0.961	2.000	0.278	1.000		NA
2101243	2101244	BCG_2934c	BCG_2935c		pknI	FALSE	0.075	69.000	0.000	1.000	N	NA
2101244	2101245	BCG_2935c	BCG_2936c	pknI		FALSE	0.091	44.000	0.000	1.000	N	NA
2101245	2101246	BCG_2936c	BCG_2937c		ffh	FALSE	0.264	28.000	0.025	1.000	N	NA
2101248	2101249	BCG_2939c	BCG_2940c	glnD	glnB	FALSE	0.222	58.000	0.055	1.000	N	NA
2101249	2101250	BCG_2940c	BCG_2941c	glnB	amt	TRUE	0.984	-3.000	0.467	1.000	N	NA
2101250	2101251	BCG_2941c	BCG_2942c	amt	ftsY	FALSE	0.016	477.000	0.004	0.034	N	NA
2101251	2101252	BCG_2942c	BCG_2943c	ftsY	smc	TRUE	0.651	50.000	0.165	0.011	N	NA
2101252	2101253	BCG_2943c	BCG_2944c	smc	acyP	FALSE	0.499	12.000	0.021	1.000	N	NA
2101253	2101254	BCG_2944c	BCG_2945c	acyP		FALSE	0.462	-13.000	0.028	1.000	N	NA
2101254	2101255	BCG_2945c	BCG_2946c		fpg	FALSE	0.119	102.000	0.010	1.000	N	NA
2101255	2101256	BCG_2946c	BCG_2947c	fpg	rnc	FALSE	0.011	304.000	0.068	1.000	N	NA
2101256	2101257	BCG_2947c	BCG_2948c	rnc		TRUE	0.932	-3.000	0.026	NA		NA
2101257	2101258	BCG_2948c	BCG_2949c			FALSE	0.254	51.000	0.029	NA		NA
2101259	2101260	BCG_2950	BCG_2951	tesA		FALSE	0.379	-13.000	0.000	NA		NA
2101260	2101261	BCG_2951	BCG_2952		fadD26	FALSE	0.003	416.000	0.000	NA		NA
2101261	2101262	BCG_2952	BCG_2953	fadD26	ppsA	TRUE	0.998	-3.000	0.667	1.000	Y	NA
2101262	2101263	BCG_2953	BCG_2954	ppsA	ppsB	TRUE	0.999	-3.000	0.667	0.007	Y	NA
2101263	2101264	BCG_2954	BCG_2955	ppsB	ppsC	TRUE	0.999	-3.000	0.500	0.007	Y	NA
2101264	2101265	BCG_2955	BCG_2956	ppsC	ppsD	TRUE	0.999	-3.000	0.833	0.004	Y	NA
2101265	2101266	BCG_2956	BCG_2957	ppsD	ppsE	TRUE	0.995	6.000	0.417	0.007	Y	NA
2101266	2101267	BCG_2957	BCG_2958	ppsE	drrA	TRUE	0.902	11.000	0.500	1.000	N	NA
2101267	2101268	BCG_2958	BCG_2959	drrA	drrB	TRUE	0.994	-3.000	0.750	1.000		NA
2101268	2101269	BCG_2959	BCG_2960	drrB	drrC	TRUE	0.998	-3.000	0.857	0.001		NA
2101269	2101270	BCG_2960	BCG_2961	drrC	papA5	TRUE	0.584	47.000	0.364	NA		NA
2101272	2101273	BCG_2963	BCG_2964	fadD28	mmpL7	TRUE	0.940	-7.000	0.600	1.000		NA
2101273	2101274	BCG_2964	BCG_2965	mmpL7		FALSE	0.003	632.000	0.000	1.000		NA
2101274	2101275	BCG_2965	BCG_2966			TRUE	0.898	0.000	0.000	1.000		NA
2101276	2101277	BCG_2967c	BCG_2968c	lppX	pks1	FALSE	0.046	349.000	0.500	NA		NA
2101277	2101278	BCG_2968c	BCG_2969c	pks1	fadD22	TRUE	0.999	-3.000	0.750	0.007	Y	NA
2101278	2101279	BCG_2969c	BCG_2970c	fadD22		FALSE	0.184	17.000	0.010	NA	N	NA
2101279	2101280	BCG_2970c	BCG_2971c		fadD29	FALSE	0.122	26.000	0.010	NA	N	NA
2101280	2101281	BCG_2971c	BCG_2972c	fadD29		FALSE	0.000	648.000	0.000	NA	N	NA
2101282	2101283	BCG_2973	BCG_2974			FALSE	0.222	26.000	0.000	NA		NA
2101284	2101285	BCG_2975c	BCG_2976c			FALSE	0.021	189.000	0.000	NA		NA
2101286	2101287	BCG_2977	BCG_2978			FALSE	0.279	71.000	0.071	NA		NA
2101288	2101289	BCG_2979c	BCG_2980c			FALSE	0.008	101.000	0.000	NA	N	NA
2101289	2101290	BCG_2980c	BCG_2981c			FALSE	0.079	115.000	0.000	NA		NA
2101293	2101294	BCG_2984	BCG_2985		purU	FALSE	0.202	73.000	0.012	NA		NA
2101295	2101296	BCG_2986c	BCG_2987c	kdtB		FALSE	0.477	86.000	0.367	1.000	N	NA
2101296	2101297	BCG_2987c	BCG_2988c		pca	FALSE	0.023	196.000	0.014	1.000	N	NA
2101297	2101298	BCG_2988c	BCG_2989c	pca		FALSE	0.359	25.000	0.021	NA		NA
2101298	2101299	BCG_2989c	BCG_2990c			TRUE	0.908	6.000	0.257	NA		NA
2101299	2101300	BCG_2990c	BCG_2991c		lipN	FALSE	0.447	97.000	0.421	NA	N	NA
2101301	2101302	BCG_2992	BCG_2993			TRUE	0.981	-3.000	0.000	0.039		NA
2101303	2101304	BCG_2994c	BCG_2995c		recG	TRUE	0.928	-3.000	0.018	NA		NA
2101304	2101305	BCG_2995c	BCG_2996c	recG		TRUE	0.901	3.000	0.040	1.000		NA
2101305	2101306	BCG_2996c	BCG_2997c		ung	FALSE	0.008	459.000	0.029	1.000		NA
2101306	2101307	BCG_2997c	BCG_2998c	ung	thiL	FALSE	0.241	33.000	0.028	1.000	N	NA
2101307	2101308	BCG_2998c	BCG_2999c	thiL		FALSE	0.333	-3.000	0.000	NA	N	NA
2101308	2101309	BCG_2999c	BCG_3000c			TRUE	0.982	0.000	0.000	NA	Y	NA
2101311	2101312	BCG_3002c	BCG_3003c	ddlA	gpdA2	FALSE	0.235	78.000	0.088	1.000	N	NA
2101313	2101314	BCG_3004	BCG_3005		ppk	FALSE	0.204	92.000	0.026	NA		NA
2101314	2101315	BCG_3005	BCG_3006	ppk	mutT1	FALSE	0.194	83.000	0.056	1.000	N	NA
2101316	2101317	BCG_3007c	BCG_3008c	hupB	leuD	FALSE	0.028	213.000	0.066	1.000	N	NA
2101317	2101318	BCG_3008c	BCG_3009c	leuD	leuC	TRUE	0.979	25.000	0.477	0.000	Y	NA
5582109	5582110	BCG_t37	BCG_t38	tRNA-Glu	tRNA-Gln	FALSE	0.165	40.000	0.000	NA		NA
5582110	2101324	BCG_t38	BCG_3013c	tRNA-Gln	gltS	FALSE	0.129	75.000	0.000	NA		NA
2101324	2101325	BCG_3013c	BCG_3014c	gltS		TRUE	0.932	-3.000	0.070	1.000	N	NA
2101327	2101328	BCG_3016c	BCG_3017c	leuB	serA1	TRUE	0.903	15.000	0.039	1.000	Y	NA
2101329	2101330	BCG_3018	BCG_3019			FALSE	0.008	274.000	0.000	NA		NA
2101332	2101333	BCG_3021	BCG_3022	lppY		FALSE	0.155	45.000	0.000	NA		NA
2101334	2101335	BCG_3023c	BCG_3024c	ilvC	ilvN	TRUE	0.927	38.000	0.071	0.001	Y	NA
2101335	2101336	BCG_3024c	BCG_3025c	ilvN	ilvB1	TRUE	0.998	0.000	0.380	0.001	Y	NA
2101342	2101343	BCG_3031c	BCG_3032c	gatB	pfkA	FALSE	0.220	30.000	0.011	1.000	N	NA
2101343	2101344	BCG_3032c	BCG_3033c	pfkA	gatA	FALSE	0.123	96.000	0.007	1.000	N	NA
2101344	2101345	BCG_3033c	BCG_3034c	gatA	gatC	TRUE	0.999	-3.000	0.643	0.001	Y	NA
2101347	2101348	BCG_3036c	BCG_3037c	ligA		FALSE	0.208	31.000	0.009	1.000	N	NA
2101350	2101351	BCG_3039c	BCG_3040c	esxQ	PPE46	FALSE	0.119	87.000	0.000	NA		NA
2101351	2101352	BCG_3040c	BCG_3041c	PPE46	PE27A	FALSE	0.270	21.000	0.000	NA		NA
2101352	2101353	BCG_3041c	BCG_3042c	PE27A	esxR	FALSE	0.006	296.000	0.000	NA		NA
2101353	2101354	BCG_3042c	BCG_3043c	esxR	esxS	FALSE	0.178	35.000	0.000	NA		NA
2101354	2101355	BCG_3043c	BCG_3044c	esxS	PPE47	FALSE	0.152	47.000	0.000	NA		NA
2101355	2101356	BCG_3044c	BCG_3045c	PPE47	PE29	TRUE	0.876	-3.000	0.000	NA		NA
2101356	2101357	BCG_3045c	BCG_3046c	PE29		FALSE	0.004	382.000	0.000	NA		NA
2101357	2101358	BCG_3046c	BCG_3047c		trmU	FALSE	0.017	163.000	0.000	1.000	N	NA
2101358	2101359	BCG_3047c	BCG_3048c	trmU	iscS	TRUE	0.939	-3.000	0.094	1.000	N	NA
2101359	2101360	BCG_3048c	BCG_3049c	iscS		FALSE	0.444	97.000	0.045	0.077	N	NA
2101360	2101361	BCG_3049c	BCG_3050c			TRUE	0.977	-3.000	0.286	NA		NA
2101361	2101362	BCG_3050c	BCG_3051c		fixB	FALSE	0.021	261.000	0.062	NA		NA
2101362	2101363	BCG_3051c	BCG_3052c	fixB	fixA	TRUE	0.977	39.000	0.877	0.008	Y	NA
2101364	2101365	BCG_3053	BCG_3054			TRUE	0.950	-3.000	0.019	1.000		NA
2101365	2101366	BCG_3054	BCG_3055			FALSE	0.458	32.000	0.082	1.000		NA
2101366	2101367	BCG_3055	BCG_3056			FALSE	0.181	34.000	0.000	NA		NA
2101367	2101368	BCG_3056	BCG_3057			FALSE	0.025	179.000	0.000	NA		NA
2101371	2101372	BCG_3060c	BCG_3061c	TB22.2		FALSE	0.233	73.000	0.034	NA		NA
2101372	2101373	BCG_3061c	BCG_3062c			FALSE	0.144	135.000	0.112	NA		NA
2101373	2101374	BCG_3062c	BCG_3063c		echA17	TRUE	0.943	11.000	0.292	0.077		NA
2101374	2101375	BCG_3063c	BCG_3064c	echA17		TRUE	0.798	9.000	0.043	1.000		NA
2101375	2101376	BCG_3064c	BCG_3065c			TRUE	0.951	-3.000	0.024	1.000		NA
2101376	2101377	BCG_3065c	BCG_3066c		serB2	FALSE	0.402	15.000	0.014	1.000	N	NA
2101377	2101378	BCG_3066c	BCG_3067c	serB2	ctaD	FALSE	0.181	38.000	0.007	1.000	N	NA
2101379	2101380	BCG_3068	BCG_3069	fecB	adhC	FALSE	0.342	70.000	0.068	1.000		NA
2101381	2101382	BCG_3070c	BCG_3071c			FALSE	0.005	334.000	0.000	NA		NA
2101382	2101383	BCG_3071c	BCG_3072c		nrdF2	FALSE	0.113	98.000	0.000	NA		NA
2101383	2101384	BCG_3072c	BCG_3073c	nrdF2		FALSE	0.109	131.000	0.067	1.000	N	NA
2101384	2101385	BCG_3073c	BCG_3074c			FALSE	0.305	134.000	0.400	1.000	N	NA
2101385	2101386	BCG_3074c	BCG_3075c		nrdE	FALSE	0.132	128.000	0.100	1.000	N	NA
2101386	2101387	BCG_3075c	BCG_3076c	nrdE	nrdI	TRUE	0.802	66.000	0.300	NA	Y	NA
2101387	2101388	BCG_3076c	BCG_3077c	nrdI	nrdH	TRUE	0.634	35.000	0.500	NA	N	NA
2101388	2101389	BCG_3077c	BCG_3078c	nrdH		FALSE	0.532	-22.000	0.083	NA		NA
2101389	2101390	BCG_3078c	BCG_3079c			FALSE	0.179	117.000	0.080	NA		NA
2101391	2101392	BCG_3080	BCG_3081		dinP	TRUE	0.793	10.000	0.060	1.000		NA
2101393	2101394	BCG_3082c	BCG_3083c			FALSE	0.559	64.000	0.316	1.000		NA
2101396	2101397	BCG_3085c	BCG_3086c		fadE22	FALSE	0.042	117.000	0.000	1.000	N	NA
2101398	2101399	BCG_3087	BCG_3088	ligB	cstA	FALSE	0.084	136.000	0.049	1.000	N	NA
2101401	2101402	BCG_3090	BCG_3091	mmr		TRUE	0.968	-3.000	0.143	1.000		NA
2101402	2101403	BCG_3091	BCG_3092			FALSE	0.081	113.000	0.000	NA		NA
5582111	2101405	BCG_t39	BCG_3093c	tRNA-Ala	pgmA	FALSE	0.132	67.000	0.000	NA		NA
2101406	2101407	BCG_3094	BCG_3095			TRUE	0.998	-3.000	0.290	0.034	Y	NA
2101407	2101408	BCG_3095	BCG_3096			TRUE	0.971	-3.000	0.226	NA		NA
2101409	2101410	BCG_3097c	BCG_3098c			TRUE	0.617	7.000	0.000	NA		NA
2101413	2101414	BCG_3101	BCG_3102			TRUE	0.872	-7.000	0.333	NA		NA
2101414	2101415	BCG_3102	BCG_3103		hab	TRUE	0.797	1.000	0.000	NA		NA
2101416	2101417	BCG_3104c	BCG_3105c		pknK	FALSE	0.139	59.000	0.000	NA		NA
2101420	2101421	BCG_3108	BCG_3109		lipR	TRUE	0.788	6.000	0.077	1.000	N	NA
2101421	2101422	BCG_3109	BCG_3110	lipR		TRUE	0.986	-3.000	0.077	0.077		NA
2101422	2101423	BCG_3110	BCG_3111		adhD	TRUE	0.633	31.000	0.000	0.039		NA
2101423	2101424	BCG_3111	BCG_3112	adhD		FALSE	0.170	38.000	0.000	NA		NA
2101424	2101425	BCG_3112	BCG_3113			TRUE	0.977	-3.000	0.286	NA		NA
2101425	2101426	BCG_3113	BCG_3114		fadD13	TRUE	0.995	-3.000	1.000	NA		NA
2101426	2101427	BCG_3114	BCG_3115	fadD13		FALSE	0.000	939.000	0.000	NA	N	NA
2101427	2101428	BCG_3115	BCG_3116			FALSE	0.298	18.000	0.000	NA		NA
2101429	2101430	BCG_3117c	BCG_3118c			FALSE	0.222	26.000	0.000	NA		NA
2101430	2101431	BCG_3118c	BCG_3119c			TRUE	0.954	-3.000	0.231	NA	N	NA
2101432	2101433	BCG_3120	BCG_3121			FALSE	0.113	98.000	0.000	NA		NA
2101434	2101435	BCG_3122c	BCG_3123c	PE_PGRS63		FALSE	0.073	119.000	0.000	NA		NA
2101435	5582112	BCG_3123c	BCG_s40		ssr	FALSE	0.039	151.000	0.000	NA		NA
5582112	2101437	BCG_s40	BCG_3124c	ssr		FALSE	0.544	-6.000	0.000	NA		NA
2101437	2101438	BCG_3124c	BCG_3125c		smpB	FALSE	0.173	37.000	0.000	NA		NA
2101438	2101439	BCG_3125c	BCG_3126c	smpB	ftsX	TRUE	0.823	3.000	0.038	1.000	N	NA
2101439	2101440	BCG_3126c	BCG_3127c	ftsX	ftsE	TRUE	0.994	1.000	0.431	1.000	Y	NA
2101440	2101441	BCG_3127c	BCG_3128c	ftsE		TRUE	0.598	44.000	0.010	0.063		NA
2101441	2101442	BCG_3128c	BCG_3129c			TRUE	0.930	2.000	0.096	1.000		NA
2101442	2101443	BCG_3129c	BCG_3130c		prfB	FALSE	0.460	-10.000	0.013	1.000	N	NA
2101446	2101447	BCG_3133	BCG_3134		moaA1	FALSE	0.040	149.000	0.000	NA		NA
2101447	2101448	BCG_3134	BCG_3135	moaA1	moaB1	TRUE	0.685	51.000	0.000	1.000	Y	NA
2101448	2101449	BCG_3135	BCG_3136	moaB1	moaC1	TRUE	0.989	-3.000	0.000	1.000	Y	NA
2101449	2101450	BCG_3136	BCG_3137	moaC1	moaD1	TRUE	0.966	17.000	0.175	0.004	Y	NA
2101450	2101451	BCG_3137	BCG_3138	moaD1		FALSE	0.114	122.000	0.000	1.000		NA
2101451	2101452	BCG_3138	BCG_3139			FALSE	0.443	17.000	0.000	1.000		NA
2101452	2101453	BCG_3139	BCG_3140			FALSE	0.017	162.000	0.000	1.000	N	NA
2101453	2101454	BCG_3140	BCG_3141		moeB2	FALSE	0.073	78.000	0.000	1.000	N	NA
2101454	2101455	BCG_3141	BCG_3142	moeB2	cysA3	FALSE	0.121	29.000	0.000	1.000	N	NA
2101455	2101456	BCG_3142	BCG_3143	cysA3		FALSE	0.004	378.000	0.000	NA		NA
2101456	2101457	BCG_3143	BCG_3144			FALSE	0.535	10.000	0.000	NA		NA
2101457	2101458	BCG_3144	BCG_3145			FALSE	0.003	443.000	0.000	NA		NA
2101459	2101460	BCG_3146c	BCG_3147c	PPE49b	PPE49a	FALSE	0.434	12.000	0.000	NA		NA
2101460	2101461	BCG_3147c	BCG_3148c	PPE49a		FALSE	0.035	157.000	0.000	NA		NA
2101463	2101464	BCG_3150c	BCG_3151c			FALSE	0.122	82.000	0.000	NA		NA
2101468	2101469	BCG_3155c	BCG_3156c	devS	devR	TRUE	0.997	-3.000	0.091	0.006	Y	NA
2101469	2101470	BCG_3156c	BCG_3157c	devR		TRUE	0.963	28.000	1.000	1.000	Y	NA
2101471	2101472	BCG_3158	BCG_3159	PPE50	PPE51	FALSE	0.020	652.000	0.000	NA	Y	NA
2101472	2101473	BCG_3159	BCG_3160	PPE51		FALSE	0.000	457.000	0.000	NA	N	NA
2101473	2101474	BCG_3160	BCG_3161		pflA	FALSE	0.174	20.000	0.000	1.000	N	NA
2101474	2101475	BCG_3161	BCG_3162	pflA	fadE24	FALSE	0.072	80.000	0.000	1.000	N	NA
2101475	2101476	BCG_3162	BCG_3163	fadE24	fadE23	TRUE	0.981	21.000	0.604	0.008	Y	NA
2101476	2101477	BCG_3163	BCG_3164	fadE23	fadB4	FALSE	0.180	100.000	0.057	1.000	N	NA
2101481	2101482	BCG_3168	BCG_3169	nuoA	nuoB	TRUE	0.994	9.000	0.498	0.002	Y	NA
2101482	2101483	BCG_3169	BCG_3170	nuoB	nuoC	TRUE	0.999	-3.000	0.691	0.002	Y	NA
2101483	2101484	BCG_3170	BCG_3171	nuoC	nuoD	TRUE	0.998	0.000	0.299	0.004	Y	NA
2101484	2101485	BCG_3171	BCG_3172	nuoD	nuoE	TRUE	0.998	-3.000	0.161	0.004	Y	NA
2101485	2101486	BCG_3172	BCG_3173	nuoE	nuoF	TRUE	0.998	-3.000	0.163	0.004	Y	NA
2101486	2101487	BCG_3173	BCG_3174	nuoF	nuoG	TRUE	0.999	-3.000	0.753	0.004	Y	NA
2101487	2101488	BCG_3174	BCG_3175	nuoG	nuoH	TRUE	0.828	116.000	0.151	0.004	Y	NA
2101488	2101489	BCG_3175	BCG_3176	nuoH	nuoI	TRUE	0.985	-7.000	0.221	0.004	Y	NA
2101489	2101490	BCG_3176	BCG_3177	nuoI	nuoJ	TRUE	0.998	-3.000	0.210	0.004	Y	NA
2101490	2101491	BCG_3177	BCG_3178	nuoJ	nuoK	TRUE	0.999	-3.000	0.306	0.002	Y	NA
2101491	2101492	BCG_3178	BCG_3179	nuoK	nuoL	TRUE	0.995	11.000	0.790	0.004	Y	NA
2101492	2101493	BCG_3179	BCG_3180	nuoL	nuoM	TRUE	0.999	-3.000	0.373	0.001	Y	NA
2101493	2101494	BCG_3180	BCG_3181	nuoM	nuoN	TRUE	0.998	-3.000	0.257	0.001	Y	NA
2101495	2101496	BCG_3182c	BCG_3183c	PPE53	PPE70	FALSE	0.096	248.000	0.000	NA	Y	NA
2101496	2101497	BCG_3183c	BCG_3184c	PPE70		FALSE	0.002	175.000	0.000	NA	N	NA
2101497	2101498	BCG_3184c	BCG_3185c			FALSE	0.338	11.000	0.000	1.000	N	NA
2101498	2101499	BCG_3185c	BCG_3186c			FALSE	0.223	-84.000	0.000	NA		NA
2101499	2101500	BCG_3186c	BCG_3187c			TRUE	0.968	-3.000	0.212	NA		NA
2101500	2101501	BCG_3187c	BCG_3188c		moxR3	TRUE	0.818	30.000	0.744	NA		NA
2101501	2101502	BCG_3188c	BCG_3189c	moxR3		TRUE	0.872	8.000	0.231	NA		NA
2101502	2101503	BCG_3189c	BCG_3190c			TRUE	0.982	-3.000	0.345	NA		NA
2101503	2101504	BCG_3190c	BCG_3191c			FALSE	0.125	80.000	0.000	NA		NA
2101505	2101506	BCG_3192	BCG_3193			TRUE	0.980	0.000	0.444	NA		NA
2101506	2101507	BCG_3193	BCG_3194		aofH	FALSE	0.045	143.000	0.000	NA		NA
2101508	2101509	BCG_3195c	BCG_3196c	hpx		FALSE	0.051	137.000	0.000	NA		NA
2101509	2101510	BCG_3196c	BCG_3197c			FALSE	0.126	79.000	0.000	NA		NA
2101511	2101512	BCG_3198	BCG_3199			FALSE	0.490	15.000	0.000	1.000		NA
2101513	2101514	BCG_3200c	BCG_3201c	mesTb	mesTa	FALSE	0.434	12.000	0.000	NA		NA
2101515	2101516	BCG_3202	BCG_3203			FALSE	0.060	131.000	0.000	NA		NA
2101516	2101517	BCG_3203	BCG_3204			FALSE	0.011	240.000	0.000	NA		NA
2101517	2101518	BCG_3204	BCG_3205			FALSE	0.007	288.000	0.000	NA		NA
2101519	2101520	BCG_3206c	BCG_3207c			TRUE	0.947	3.000	0.286	NA		NA
2101521	2101522	BCG_3208	BCG_3209			TRUE	0.876	-3.000	0.000	NA		NA
2101522	2101523	BCG_3209	BCG_3210			FALSE	0.004	538.000	0.000	1.000		NA
2101523	2101524	BCG_3210	BCG_3211			TRUE	0.876	-3.000	0.000	NA		NA
2101525	2101526	BCG_3212c	BCG_3213c			FALSE	0.002	624.000	0.000	NA		NA
2101526	5582113	BCG_3213c	BCG_t41		tRNA-Met	FALSE	0.002	1022.000	0.000	NA		NA
2101529	2101530	BCG_3215c	BCG_3216c			FALSE	0.316	92.000	0.069	1.000		NA
2101531	2101532	BCG_3217	BCG_3218			TRUE	0.827	6.000	0.072	NA		NA
2101535	2101536	BCG_3221c	BCG_3222c	whiB7	UvrD2	FALSE	0.005	430.000	0.000	1.000		NA
2101538	2101539	BCG_3224c	BCG_3225c	nudC		FALSE	0.210	59.000	0.048	1.000	N	NA
2101539	2101540	BCG_3225c	BCG_3226c			FALSE	0.260	62.000	0.110	1.000	N	NA
2101540	2101541	BCG_3226c	BCG_3227c			TRUE	0.999	-3.000	0.493	0.002	Y	NA
2101542	2101543	BCG_3228	BCG_3229		lipV	FALSE	0.125	142.000	0.115	NA		NA
2101543	2101544	BCG_3229	BCG_3230	lipV		TRUE	0.973	3.000	0.111	0.033		NA
2101545	2101546	BCG_3231c	BCG_3232c		moeB1	TRUE	0.602	27.000	0.273	NA		NA
2101546	2101547	BCG_3232c	BCG_3233c	moeB1		FALSE	0.449	91.000	0.236	1.000		NA
2101552	2101553	BCG_3238	BCG_3239	rhlE		TRUE	0.651	13.000	0.096	NA		NA
2101555	2101556	BCG_3241	BCG_3242	gpm2_1	entC_1	TRUE	0.952	-3.000	0.167	1.000	N	NA
2101556	2101557	BCG_3242	BCG_3243	entC_1		FALSE	0.166	148.000	0.170	1.000		NA
2101559	2101560	BCG_3245	BCG_3246		whiB1_1	FALSE	0.012	280.000	0.000	1.000		NA
2101561	2101562	BCG_3247c	BCG_3248c		TB7.3_1	TRUE	0.568	17.000	0.102	NA		NA
2101562	2101563	BCG_3248c	BCG_3249c	TB7.3_1		FALSE	0.015	285.000	0.046	NA		NA
2101563	2101564	BCG_3249c	BCG_3250c			TRUE	0.876	-3.000	0.000	NA		NA
2101564	2101565	BCG_3250c	BCG_3251c		sigH_1	TRUE	0.876	-3.000	0.000	NA		NA
2101566	2101567	BCG_3252	BCG_3253			FALSE	0.229	-64.000	0.000	NA		NA
2101567	2101568	BCG_3253	BCG_3254			FALSE	0.296	-22.000	0.000	NA		NA
2101569	2101570	BCG_3255c	BCG_3256c			FALSE	0.069	124.000	0.000	NA		NA
2101571	2101572	BCG_3257	BCG_3258	aroA_1		TRUE	0.960	-3.000	0.063	1.000		NA
2101573	2101574	BCG_3259c	BCG_3260c	desA3_1		TRUE	0.629	78.000	0.583	1.000	N	NA
2101574	2101575	BCG_3260c	BCG_3261c			FALSE	0.286	110.000	0.208	NA		NA
2101575	2101576	BCG_3261c	BCG_3262c		pvdS	TRUE	0.934	-3.000	0.029	NA		NA
2101576	2101577	BCG_3262c	BCG_3263c	pvdS		FALSE	0.374	24.000	0.022	NA		NA
2101579	2101580	BCG_3265c	BCG_3266c			TRUE	0.995	5.000	0.889	1.000	Y	NA
2101580	2101581	BCG_3266c	BCG_3267c			FALSE	0.206	61.000	0.136	NA	N	NA
2101581	2101582	BCG_3267c	BCG_3268c			FALSE	0.180	59.000	0.091	NA	N	NA
2101582	2101583	BCG_3268c	BCG_3269c		secA1	FALSE	0.158	79.000	0.020	1.000	N	NA
2101583	2101584	BCG_3269c	BCG_3270c	secA1		FALSE	0.167	79.000	0.094	NA	N	NA
2101584	2101585	BCG_3270c	BCG_3271c			FALSE	0.014	316.000	0.072	NA		NA
2101585	2101586	BCG_3271c	BCG_3272c			FALSE	0.276	38.000	0.022	NA		NA
2101586	2101587	BCG_3272c	BCG_3273c		lpqB	FALSE	0.267	68.000	0.061	NA		NA
2101587	2101588	BCG_3273c	BCG_3274c	lpqB	mtrB	TRUE	0.979	0.000	0.418	NA		NA
2101588	2101589	BCG_3274c	BCG_3275c	mtrB	mtrA	TRUE	0.930	50.000	0.772	1.000	Y	NA
2101589	2101590	BCG_3275c	BCG_3276c	mtrA	tmk	FALSE	0.164	70.000	0.021	1.000	N	NA
2101590	2101591	BCG_3276c	BCG_3277c	tmk	sahH	FALSE	0.138	97.000	0.016	1.000	N	NA
2101591	2101592	BCG_3277c	BCG_3278c	sahH		FALSE	0.115	105.000	0.012	1.000	N	NA
2101592	2101593	BCG_3278c	BCG_3279c			TRUE	0.988	-3.000	0.600	1.000	N	NA
2101593	2101594	BCG_3279c	BCG_3280c			TRUE	0.998	5.000	0.750	0.007	Y	NA
2101594	2101595	BCG_3280c	BCG_3281c		alkB	TRUE	0.992	0.000	0.778	1.000		NA
2101595	2101596	BCG_3281c	BCG_3282c	alkB		TRUE	0.693	109.000	0.778	1.000		NA
2101598	2101599	BCG_3284c	BCG_3285c	manA		TRUE	0.851	8.000	0.198	NA		NA
2101599	2101600	BCG_3285c	BCG_3286c		manB	TRUE	0.957	-3.000	0.138	NA		NA
2101600	2101601	BCG_3286c	BCG_3287c	manB		FALSE	0.546	102.000	0.460	NA		NA
2101604	2101605	BCG_3290	BCG_3291	fbiA	fbiB	TRUE	0.983	-3.000	0.371	NA		NA
2101605	2101606	BCG_3291	BCG_3292	fbiB		FALSE	0.016	296.000	0.018	1.000		NA
2101607	2101608	BCG_3293c	BCG_3294c	manC	wbbL1	TRUE	0.920	2.000	0.151	NA		NA
2101608	2101609	BCG_3294c	BCG_3295c	wbbL1	rmld	TRUE	0.878	11.000	0.354	NA		NA
2101610	2101611	BCG_3296	BCG_3297			TRUE	0.704	39.000	0.517	NA		NA
2101611	2101612	BCG_3297	BCG_3298			FALSE	0.171	125.000	0.103	NA		NA
2101612	2101613	BCG_3298	BCG_3299		ctpC	TRUE	0.914	11.000	0.500	NA		NA
2101615	2101616	BCG_3301	BCG_3302			FALSE	0.545	5.000	0.000	1.000	N	NA
2101617	2101618	BCG_3303c	BCG_3304c	fadE25	purE	FALSE	0.252	25.000	0.009	1.000	N	NA
2101618	2101619	BCG_3304c	BCG_3305c	purE	purK	TRUE	0.998	-3.000	0.141	0.000	Y	NA
2101621	2101622	BCG_3307c	BCG_3308c		birA	FALSE	0.252	43.000	0.016	NA		NA
2101623	2101624	BCG_3309	BCG_3310	accD5		TRUE	0.891	-19.000	0.692	NA		NA
2101624	2101625	BCG_3310	BCG_3311			TRUE	0.926	-3.000	0.015	NA		NA
2101625	2101626	BCG_3311	BCG_3312		sseA	FALSE	0.089	41.000	0.011	NA	N	NA
2101626	2101627	BCG_3312	BCG_3313	sseA		TRUE	0.982	-3.000	0.351	NA		NA
2101627	2101628	BCG_3313	BCG_3314		accA3	FALSE	0.183	108.000	0.045	NA		NA
2101629	2101630	BCG_3315c	BCG_3316c	sigF	rsbW	TRUE	0.987	-3.000	0.636	NA	N	NA
2101630	2101631	BCG_3316c	BCG_3317c	rsbW	usfY	FALSE	0.019	198.000	0.000	NA		NA
2101631	2101632	BCG_3317c	BCG_3318c	usfY		TRUE	0.606	35.000	0.333	NA		NA
2101632	2101633	BCG_3318c	BCG_3319c		lat	FALSE	0.373	34.000	0.083	NA		NA
2101633	2101634	BCG_3319c	BCG_3320c	lat		FALSE	0.397	51.000	0.224	1.000	N	NA
2101635	2101636	BCG_3321	BCG_3322		pcd_1	FALSE	0.435	27.000	0.103	NA		NA
2101638	2101639	BCG_3324	BCG_3325		lhr_1	FALSE	0.358	44.000	0.040	1.000		NA
2101639	2101640	BCG_3325	BCG_3326	lhr_1	nei_1	TRUE	0.960	4.000	0.352	1.000		NA
2101641	2101642	BCG_3327c	BCG_3328c	lpqC_1	atsB	FALSE	0.128	27.000	0.000	1.000	N	NA
2101642	2101643	BCG_3328c	BCG_3329c	atsB		FALSE	0.322	20.000	0.015	1.000	N	NA
2101643	2101644	BCG_3329c	BCG_3330c		phoY1_1	FALSE	0.051	12.000	0.000	NA	N	NA
2101644	2101645	BCG_3330c	BCG_3331c	phoY1_1	glpD2_1	FALSE	0.007	108.000	0.000	NA	N	NA
2101645	2101646	BCG_3331c	BCG_3332c	glpD2_1	'lpdA	FALSE	0.124	81.000	0.000	NA		NA
2101646	2101647	BCG_3332c	BCG_3333c	'lpdA		FALSE	0.544	-6.000	0.000	NA		NA
2101648	2101649	BCG_3334	BCG_3335	gpm2_2	entC_2	TRUE	0.952	-3.000	0.167	1.000	N	NA
2101649	2101650	BCG_3335	BCG_3336	entC_2		FALSE	0.166	148.000	0.170	1.000		NA
2101652	2101653	BCG_3338	BCG_3339		whiB1_2	FALSE	0.012	280.000	0.000	1.000		NA
2101654	2101655	BCG_3340c	BCG_3341c		TB7.3_2	TRUE	0.568	17.000	0.102	NA		NA
2101655	2101656	BCG_3341c	BCG_3342c	TB7.3_2		FALSE	0.015	285.000	0.046	NA		NA
2101656	2101657	BCG_3342c	BCG_3343c			TRUE	0.876	-3.000	0.000	NA		NA
2101657	2101658	BCG_3343c	BCG_3344c		sigH_2	TRUE	0.876	-3.000	0.000	NA		NA
2101659	2101660	BCG_3345	BCG_3346			FALSE	0.229	-64.000	0.000	NA		NA
2101660	2101661	BCG_3346	BCG_3347			FALSE	0.296	-22.000	0.000	NA		NA
2101662	2101663	BCG_3348c	BCG_3349c			FALSE	0.069	124.000	0.000	NA		NA
2101664	2101665	BCG_3350	BCG_3351	aroA_2		TRUE	0.960	-3.000	0.063	1.000		NA
2101666	2101667	BCG_3352c	BCG_3353c	desA3_2		TRUE	0.629	78.000	0.583	1.000	N	NA
2101667	2101668	BCG_3353c	BCG_3354c		lat'	FALSE	0.222	55.000	0.000	1.000		NA
2101668	2101669	BCG_3354c	BCG_3356c	lat'		FALSE	0.504	51.000	0.224	1.000		NA
2101670	2101671	BCG_3357	BCG_3358		pcd_2	FALSE	0.435	27.000	0.103	NA		NA
2101673	2101674	BCG_3360	BCG_3361		lhr_2	FALSE	0.358	44.000	0.040	1.000		NA
2101674	2101675	BCG_3361	BCG_3362	lhr_2	nei_2	TRUE	0.960	4.000	0.352	1.000		NA
2101676	2101677	BCG_3363c	BCG_3364c	lpqC_2	atsB_2	FALSE	0.128	27.000	0.000	1.000	N	NA
2101677	2101678	BCG_3364c	BCG_3365c	atsB_2		FALSE	0.322	20.000	0.015	1.000	N	NA
2101678	2101679	BCG_3365c	BCG_3366c		phoY1_2	FALSE	0.051	12.000	0.000	NA	N	NA
2101679	2101680	BCG_3366c	BCG_3367c	phoY1_2	glpD2_2	FALSE	0.007	108.000	0.000	NA	N	NA
2101680	2101681	BCG_3367c	BCG_3368c	glpD2_2	lpdA	TRUE	0.847	81.000	0.071	0.046	Y	NA
2101683	2101684	BCG_3370c	BCG_3371c	amiA1	amiB1	TRUE	0.992	-3.000	0.132	0.003		NA
2101685	2101686	BCG_3372	BCG_3373	deoD	pmmB	TRUE	0.911	4.000	0.235	1.000	N	NA
2101688	2101689	BCG_3375	BCG_3376	sapM		FALSE	0.475	24.000	0.100	NA		NA
2101690	2101691	BCG_3377c	BCG_3378c			FALSE	0.004	375.000	0.000	NA		NA
2101691	2101692	BCG_3378c	BCG_3379c		add	FALSE	0.130	71.000	0.000	NA		NA
2101692	2101693	BCG_3379c	BCG_3380c	add	deoA	TRUE	0.989	0.000	0.062	1.000	Y	NA
2101693	2101694	BCG_3380c	BCG_3381c	deoA	cdd	TRUE	0.994	-3.000	0.221	1.000	Y	NA
2101695	2101696	BCG_3382	BCG_3383	sdhC	sdhD	TRUE	0.998	-3.000	0.157	0.000	Y	NA
2101696	2101697	BCG_3383	BCG_3384	sdhD	sdhA	TRUE	0.931	129.000	0.705	0.002	Y	NA
2101697	2101698	BCG_3384	BCG_3385	sdhA	sdhB	TRUE	0.999	0.000	0.604	0.002	Y	NA
2101699	2101700	BCG_3386c	BCG_3387c			TRUE	0.723	4.000	0.000	NA		NA
2101700	2101701	BCG_3387c	BCG_3388c			FALSE	0.070	122.000	0.000	NA		NA
2101701	2101702	BCG_3388c	BCG_3389c		moaX	TRUE	0.876	-3.000	0.000	NA		NA
2101702	2101703	BCG_3389c	BCG_3390c	moaX	moaC3	TRUE	0.994	1.000	0.025	0.004	Y	NA
2101703	2101704	BCG_3390c	BCG_3391c	moaC3	moaB3	TRUE	0.989	-3.000	0.000	1.000	Y	NA
2101704	2101705	BCG_3391c	BCG_3392c	moaB3	moaA3	TRUE	0.619	97.000	0.000	1.000	Y	NA
2101706	2101707	BCG_3393	BCG_3394			FALSE	0.296	-22.000	0.000	NA		NA
2101707	2101708	BCG_3394	BCG_3395		embR2	FALSE	0.209	-124.000	0.000	NA		NA
2101712	2101713	BCG_3399	BCG_3400		dacB1	FALSE	0.233	69.000	0.077	1.000	N	NA
2101713	2101714	BCG_3400	BCG_3401	dacB1	sugI	FALSE	0.206	96.000	0.074	1.000	N	NA
2101714	2101715	BCG_3401	BCG_3402	sugI	nagA	TRUE	0.992	-3.000	0.054	1.000	Y	NA
2101717	2101718	BCG_3404	BCG_3405			FALSE	0.289	19.000	0.000	NA		NA
2101719	2101720	BCG_3406c	BCG_3407c		trpS	FALSE	0.533	21.000	0.045	1.000		NA
2101723	2101724	BCG_3410	BCG_3411	metC	metA	TRUE	0.976	12.000	0.542	1.000	Y	NA
2101724	2101725	BCG_3411	BCG_3412	metA		TRUE	0.945	-3.000	0.136	1.000	N	NA
2101726	2101727	BCG_3413c	BCG_3414c	PPE54	PE_PGRS50	FALSE	0.149	49.000	0.000	NA		NA
2101727	2101728	BCG_3414c	BCG_3415c	PE_PGRS50		FALSE	0.003	424.000	0.000	NA		NA
2101728	2101729	BCG_3415c	BCG_3416c		PPE55b	FALSE	0.009	256.000	0.000	NA		NA
2101729	2101730	BCG_3416c	BCG_3417c	PPE55b	PPE55a	TRUE	0.876	-3.000	0.000	NA		NA
2101732	2101733	BCG_3419c	BCG_3420c		PPE56d	FALSE	0.002	914.000	0.000	NA		NA
2101733	2101734	BCG_3420c	BCG_3421c	PPE56d	PPE56b	FALSE	0.544	-6.000	0.000	NA		NA
2101734	2101735	BCG_3421c	BCG_3422c	PPE56b	PPE56a	FALSE	0.141	58.000	0.000	NA		NA
2101735	2101736	BCG_3422c	BCG_3423c	PPE56a		FALSE	0.010	244.000	0.000	NA		NA
2101736	2101737	BCG_3423c	BCG_3424c			FALSE	0.122	82.000	0.000	NA		NA
2101737	2101738	BCG_3424c	BCG_3425c			FALSE	0.045	143.000	0.000	NA		NA
2101740	2101741	BCG_3427c	BCG_3428c		folD	TRUE	0.986	-3.000	0.453	NA		NA
2101742	2101743	BCG_3429	BCG_3430			TRUE	0.876	-3.000	0.000	NA		NA
2101743	2101744	BCG_3430	BCG_3431			FALSE	0.161	42.000	0.000	NA		NA
2101744	2101745	BCG_3431	BCG_3432			FALSE	0.076	117.000	0.000	NA		NA
2101746	2101747	BCG_3433c	BCG_3434c			TRUE	0.935	7.000	0.412	NA		NA
2101747	2101748	BCG_3434c	BCG_3435c			TRUE	0.854	-19.000	0.529	NA		NA
2101748	2101749	BCG_3435c	BCG_3436c			TRUE	0.898	-22.000	0.818	NA		NA
2101749	2101750	BCG_3436c	BCG_3437c			TRUE	0.991	-3.000	0.636	NA		NA
2101751	2101752	BCG_3438	BCG_3439	spoU	PE_PGRS51	FALSE	0.004	367.000	0.000	NA		NA
2101756	2101757	BCG_3443	BCG_3444		otsB2	FALSE	0.254	42.000	0.016	NA		NA
2101757	2101758	BCG_3444	BCG_3445	otsB2	echA18	FALSE	0.006	237.000	0.000	1.000	N	NA
2101758	2101759	BCG_3445	BCG_3446	echA18	amiD	FALSE	0.545	5.000	0.000	1.000	N	NA
2101759	2101760	BCG_3446	BCG_3447	amiD		FALSE	0.149	108.000	0.000	1.000		NA
2101761	2101762	BCG_3448c	BCG_3449c			TRUE	0.689	5.000	0.000	NA		NA
2101762	2101763	BCG_3449c	BCG_3450c		dxs2	TRUE	0.893	9.000	0.000	0.075		NA
2101763	2101764	BCG_3450c	BCG_3451c	dxs2	lytB1	TRUE	0.996	-3.000	0.333	1.000	Y	NA
2101764	2101765	BCG_3451c	BCG_3452c	lytB1	idsB	TRUE	0.735	0.000	0.000	1.000	N	NA
2101765	2101766	BCG_3452c	BCG_3453c	idsB		FALSE	0.002	754.000	0.000	NA		NA
2101766	2101767	BCG_3453c	BCG_3454c			TRUE	0.983	0.000	0.500	NA		NA
2101768	2101769	BCG_3455	BCG_3456			TRUE	0.883	-10.000	0.000	NA	Y	NA
2101769	2101770	BCG_3456	BCG_3457		PE_PGRS52	FALSE	0.021	190.000	0.000	NA		NA
2101772	2101773	BCG_3459	BCG_3460	lpqD	acrA1	FALSE	0.187	46.000	0.077	NA	N	NA
2101776	2101777	BCG_3463c	BCG_3464c			TRUE	0.991	-3.000	0.636	NA		NA
2101779	2101780	BCG_3466c	BCG_3467c	guaA	phyA	FALSE	0.293	12.000	0.000	1.000	N	NA
2101780	2101781	BCG_3467c	BCG_3468c	phyA	idsA1	FALSE	0.121	29.000	0.000	1.000	N	NA
2101782	2101783	BCG_3469	BCG_3470			FALSE	0.134	64.000	0.000	NA		NA
2101783	2101784	BCG_3470	BCG_3471			TRUE	0.915	15.000	0.286	0.032		NA
2101785	2101786	BCG_3472c	BCG_3473c			FALSE	0.004	371.000	0.000	NA		NA
2101786	2101787	BCG_3473c	BCG_3474c			FALSE	0.317	17.000	0.000	NA		NA
2101787	2101788	BCG_3474c	BCG_3475c			FALSE	0.121	118.000	0.000	1.000		NA
2101789	2101790	BCG_3476	BCG_3477			FALSE	0.015	35.000	0.000	NA	N	NA
2101790	2101791	BCG_3477	BCG_3478			TRUE	0.876	-3.000	0.000	NA		NA
2101792	2101793	BCG_3479c	BCG_3480c	choD	guaB3	FALSE	0.229	56.000	0.057	1.000	N	NA
2101793	2101794	BCG_3480c	BCG_3481c	guaB3	guaB2	TRUE	0.959	20.000	0.056	0.001	Y	NA
2101796	2101797	BCG_3483c	BCG_3484c		sigD	TRUE	0.932	-7.000	0.615	NA		NA
2101797	2101798	BCG_3484c	BCG_3485c	sigD		TRUE	0.896	18.000	0.706	1.000		NA
2101800	2101801	BCG_3487c	BCG_3488c	groEL1	groES	TRUE	0.953	95.000	0.592	0.003	Y	NA
2101801	2101802	BCG_3488c	BCG_3489c	groES	gcp	FALSE	0.110	267.000	0.004	1.000	Y	NA
2101802	2101803	BCG_3489c	BCG_3490c	gcp	rimI	TRUE	0.959	-3.000	0.056	1.000		NA
2101803	2101804	BCG_3490c	BCG_3491c	rimI		TRUE	0.960	-3.000	0.062	1.000		NA
2101804	2101805	BCG_3491c	BCG_3492c			TRUE	0.969	-3.000	0.217	NA		NA
2101805	2101806	BCG_3492c	BCG_3493c		alr	TRUE	0.933	-3.000	0.028	NA		NA
2101806	2101807	BCG_3493c	BCG_3494c	alr		FALSE	0.006	294.000	0.000	NA		NA
2101809	2101810	BCG_3496c	BCG_3497c			FALSE	0.071	489.000	0.000	0.041	Y	NA
2101810	2101811	BCG_3497c	BCG_3498c		gadB	FALSE	0.006	233.000	0.000	1.000	N	NA
2101811	2101812	BCG_3498c	BCG_3499c	gadB		FALSE	0.089	38.000	0.009	NA	N	NA
2101812	2101813	BCG_3499c	BCG_3500c			TRUE	0.842	2.000	0.004	NA		NA
2101813	2101814	BCG_3500c	BCG_3501c			TRUE	0.856	11.000	0.300	NA		NA
2101814	2101815	BCG_3501c	BCG_3502c		glmS	FALSE	0.021	222.000	0.005	NA		NA
2101816	2101817	BCG_3503	BCG_3504			TRUE	0.763	10.000	0.095	NA		NA
2101818	2101819	BCG_3505c	BCG_3506c			TRUE	0.986	3.000	0.875	NA		NA
2101819	2101820	BCG_3506c	BCG_3507c		mrsA	FALSE	0.224	48.000	0.009	NA		NA
2101820	2101821	BCG_3507c	BCG_3508c	mrsA	rpsI	FALSE	0.122	125.000	0.068	1.000	N	NA
2101821	2101822	BCG_3508c	BCG_3509c	rpsI	rplM	TRUE	0.999	-3.000	0.601	0.011	Y	NA
2101822	2101823	BCG_3509c	BCG_3510c	rplM	esxT	FALSE	0.012	233.000	0.000	NA		NA
2101823	2101824	BCG_3510c	BCG_3511c	esxT	esxU	TRUE	0.591	21.000	0.190	NA		NA
2101824	2101825	BCG_3511c	BCG_3512c	esxU		TRUE	0.863	-7.000	0.310	NA		NA
2101825	2101826	BCG_3512c	BCG_3513c			TRUE	0.981	-3.000	0.333	NA		NA
2101827	2101828	BCG_3514	BCG_3515			TRUE	0.992	-3.000	0.727	NA		NA
2101830	2101831	BCG_3517	BCG_3518	cut3	cut4	TRUE	0.838	47.000	0.500	0.074		NA
2101831	2101832	BCG_3518	BCG_3519	cut4		FALSE	0.008	272.000	0.000	NA		NA
2101833	2101834	BCG_3520c	BCG_3521c	truA	rplQ	TRUE	0.742	68.000	0.102	1.000	Y	NA
2101834	2101835	BCG_3521c	BCG_3522c	rplQ	rpoA	TRUE	0.824	32.000	0.873	1.000	N	NA
2101835	2101836	BCG_3522c	BCG_3523c	rpoA	rpsD	FALSE	0.309	151.000	0.549	1.000	N	NA
2101836	2101837	BCG_3523c	BCG_3524c	rpsD	rpsK	TRUE	0.993	9.000	0.509	0.015	Y	NA
2101837	2101838	BCG_3524c	BCG_3525c	rpsK	rpsM	TRUE	0.998	4.000	0.810	0.011	Y	NA
2101838	2101839	BCG_3525c	BCG_3526c	rpsM	rpmJ	FALSE	0.408	216.000	0.086	0.011	Y	NA
2101839	2101840	BCG_3526c	BCG_3527c	rpmJ	infA	TRUE	0.802	33.000	0.067	1.000	Y	NA
2101841	2101842	BCG_3528	BCG_3529		rmlB1	FALSE	0.010	73.000	0.000	NA	N	NA
2101842	2101843	BCG_3529	BCG_3530	rmlB1	rmlC	TRUE	0.990	2.000	0.250	1.000	Y	NA
2101843	2101844	BCG_3530	BCG_3531	rmlC		FALSE	0.121	83.000	0.000	NA		NA
2101844	2101845	BCG_3531	BCG_3532			FALSE	0.198	-229.000	0.000	NA		NA
2101846	2101847	BCG_3533c	BCG_3534c	rmlB2	mhpE	TRUE	0.585	4.000	0.000	1.000	N	NA
2101847	2101848	BCG_3534c	BCG_3535c	mhpE	ilvB2	TRUE	0.667	61.000	0.000	1.000	Y	NA
2101848	2101849	BCG_3535c	BCG_3536c	ilvB2		FALSE	0.500	6.000	0.000	1.000	N	NA
2101851	2101852	BCG_3538c	BCG_3539c	bpoA	kgtP	FALSE	0.004	280.000	0.000	1.000	N	NA
2101853	2101854	BCG_3540	BCG_3541	PE31	PPE60	TRUE	0.843	37.000	1.000	NA		NA
2101854	2101855	BCG_3541	BCG_3542	PPE60		FALSE	0.015	213.000	0.000	NA		NA
2101855	2101856	BCG_3542	BCG_3543			TRUE	0.689	5.000	0.000	NA		NA
2101857	2101858	BCG_3544c	BCG_3545c			FALSE	0.118	91.000	0.000	NA		NA
2101858	2101859	BCG_3545c	BCG_3546c			FALSE	0.178	-565.000	0.000	NA		NA
2101859	2101860	BCG_3546c	BCG_3547c			TRUE	0.826	44.000	1.000	NA		NA
2101865	2101866	BCG_3552	BCG_3553			FALSE	0.228	82.000	0.041	NA		NA
2101866	2101867	BCG_3553	BCG_3554		otsA	TRUE	0.990	0.000	0.800	NA		NA
2101867	2101868	BCG_3554	BCG_3555	otsA		FALSE	0.139	152.000	0.200	NA		NA
2101869	2101870	BCG_3556c	BCG_3557c			TRUE	0.990	0.000	0.800	NA		NA
2101870	2101871	BCG_3557c	BCG_3558c		mce4F	TRUE	0.988	0.000	0.667	NA		NA
2101871	2101872	BCG_3558c	BCG_3559c	mce4F	lprN	TRUE	0.994	11.000	0.667	0.004	Y	NA
2101872	2101873	BCG_3559c	BCG_3560c	lprN	mce4D	TRUE	0.999	-3.000	0.727	0.004	Y	NA
2101873	2101874	BCG_3560c	BCG_3561c	mce4D	mce4C	TRUE	0.999	-3.000	0.727	0.004	Y	NA
2101874	2101875	BCG_3561c	BCG_3562c	mce4C	mce4B	TRUE	0.992	-10.000	0.667	0.004	Y	NA
2101875	2101876	BCG_3562c	BCG_3563c	mce4B	mce4A	TRUE	0.999	0.000	0.667	0.004	Y	NA
2101876	2101877	BCG_3563c	BCG_3564c	mce4A	yrbE4B	TRUE	0.971	20.000	1.000	NA	Y	NA
2101877	2101878	BCG_3564c	BCG_3565c	yrbE4B	yrbE4A	TRUE	0.948	35.000	1.000	NA	Y	NA
2101878	2101879	BCG_3565c	BCG_3566c	yrbE4A		FALSE	0.121	226.000	0.000	NA	Y	NA
2101879	2101880	BCG_3566c	BCG_3567c		fdxD	TRUE	0.709	25.000	0.429	1.000	N	NA
2101881	2101882	BCG_3568	BCG_3569	fadE26	fadE27	TRUE	0.985	25.000	0.882	0.008	Y	NA
2101882	2101883	BCG_3569	BCG_3570	fadE27	fadD17	TRUE	0.902	71.000	0.647	1.000	Y	NA
2101883	2101884	BCG_3570	BCG_3571	fadD17	PE_PGRS53	FALSE	0.028	171.000	0.000	NA		NA
2101884	2101885	BCG_3571	BCG_3572	PE_PGRS53	PE_PGRS54	FALSE	0.006	291.000	0.000	NA		NA
2101886	2101887	BCG_3573c	BCG_3574c	ilvX		TRUE	0.970	-3.000	0.167	1.000		NA
2101892	2101893	BCG_3579	BCG_3580	echA19		FALSE	0.330	96.000	0.097	1.000		NA
2101894	2101895	BCG_3581c	BCG_3582c	cyp142b	cyp142a	TRUE	0.984	-3.000	0.000	0.008		NA
2101898	2101899	BCG_3585	BCG_3586			TRUE	0.923	16.000	0.880	NA		NA
2101899	2101900	BCG_3586	BCG_3587			TRUE	0.992	17.000	0.880	0.002	Y	NA
2101900	2101901	BCG_3587	BCG_3588			FALSE	0.247	42.000	0.000	1.000		NA
2101903	2101904	BCG_3590	BCG_3591			TRUE	0.970	6.000	0.727	NA		NA
2101905	2101906	BCG_3592c	BCG_3593c			FALSE	0.002	692.000	0.000	NA		NA
2101906	2101907	BCG_3593c	BCG_3594c			TRUE	0.989	0.000	0.625	1.000		NA
2101907	2101908	BCG_3594c	BCG_3595c			TRUE	0.975	-3.000	0.273	NA		NA
2101910	2101911	BCG_3597c	BCG_3598c	PPE62		FALSE	0.009	99.000	0.000	NA	N	NA
2101911	2101912	BCG_3598c	BCG_3599c			TRUE	0.977	-3.000	0.333	1.000	N	NA
2101912	2101913	BCG_3599c	BCG_3600c			TRUE	0.960	11.000	0.231	1.000	Y	NA
2101914	2101915	BCG_3601	BCG_3602			TRUE	0.990	2.000	0.625	0.037	N	NA
2101915	2101916	BCG_3602	BCG_3603		PPE63	FALSE	0.004	137.000	0.000	NA	N	NA
2101917	2101918	BCG_3604c	BCG_3605c	ltp2		TRUE	0.983	0.000	0.500	NA		NA
2101918	2101919	BCG_3605c	BCG_3606c			TRUE	0.994	-3.000	0.889	NA		NA
2101919	2101920	BCG_3606c	BCG_3607c		fadE29	TRUE	0.991	-3.000	0.652	NA		NA
2101920	2101921	BCG_3607c	BCG_3608c	fadE29	fadE28	TRUE	0.989	-15.000	0.696	0.008	Y	NA
2101921	2101922	BCG_3608c	BCG_3609c	fadE28	cyp125	TRUE	0.989	0.000	0.381	0.045	N	NA
2101923	2101924	BCG_3610	BCG_3611	fadA5		FALSE	0.133	112.000	0.000	1.000		NA
2101925	2101926	BCG_3612c	BCG_3613c			TRUE	0.973	23.000	0.515	0.037	Y	NA
2101927	2101928	BCG_3614	BCG_3615	echA20		TRUE	0.998	0.000	0.647	0.074	Y	NA
2101928	2101929	BCG_3615	BCG_3616			TRUE	0.998	-3.000	0.912	NA	Y	NA
2101929	2101930	BCG_3616	BCG_3617			TRUE	0.620	98.000	0.561	NA		NA
2101930	2101931	BCG_3617	BCG_3618		fdxB	TRUE	0.985	-3.000	0.037	0.045		NA
2101932	2101933	BCG_3619c	BCG_3620c		fadA6	FALSE	0.160	105.000	0.000	1.000		NA
2101933	2101934	BCG_3620c	BCG_3621c	fadA6		FALSE	0.546	65.000	0.423	1.000	N	NA
2101936	2101937	BCG_3623c	BCG_3624c		fadE30	TRUE	0.998	-3.000	0.629	1.000	Y	NA
2101938	2101939	BCG_3625	BCG_3626	fadD3	fadE31	TRUE	0.990	1.000	0.242	1.000	Y	NA
2101939	2101940	BCG_3626	BCG_3627	fadE31	fadE32	TRUE	0.998	-3.000	0.879	0.008		NA
2101940	2101941	BCG_3627	BCG_3628	fadE32	fadE33	TRUE	0.996	-3.000	0.484	0.008		NA
2101941	2101942	BCG_3628	BCG_3629	fadE33	aspB	TRUE	0.905	-3.000	0.024	1.000	N	NA
2101943	2101944	BCG_3630c	BCG_3631c	nat		FALSE	0.359	-15.000	0.000	NA		NA
2101944	2101945	BCG_3631c	BCG_3632c			FALSE	0.007	286.000	0.000	NA		NA
2101945	2101946	BCG_3632c	BCG_3633c		bphC	TRUE	0.889	15.000	0.520	1.000		NA
2101946	2101947	BCG_3633c	BCG_3634c	bphC	bphD	TRUE	0.997	-3.000	0.733	0.007		NA
2101947	2101948	BCG_3634c	BCG_3635c	bphD		TRUE	0.923	15.000	0.733	1.000		NA
2101949	2101950	BCG_3636	BCG_3637	hmp		TRUE	0.883	18.000	0.727	NA		NA
2101954	2101955	BCG_3641	BCG_3642	lppH		FALSE	0.020	191.000	0.000	NA		NA
2101955	2101956	BCG_3642	BCG_3643		arsB2	TRUE	0.618	14.000	0.078	NA		NA
2101957	2101958	BCG_3644c	BCG_3645c		cysS1	TRUE	0.987	1.000	0.088	1.000	Y	NA
2101958	2101959	BCG_3645c	BCG_3646c	cysS1	ispF	FALSE	0.187	65.000	0.037	1.000	N	NA
2101959	2101960	BCG_3646c	BCG_3647c	ispF	ispD	TRUE	0.997	-3.000	0.419	1.000	Y	NA
2101960	2101961	BCG_3647c	BCG_3648c	ispD		FALSE	0.471	17.000	0.068	1.000	N	NA
2101962	2101963	BCG_3649	BCG_3650	lpqE	radA	FALSE	0.281	66.000	0.014	1.000		NA
2101963	2101964	BCG_3650	BCG_3651	radA		TRUE	0.870	5.000	0.126	NA		NA
2101965	2101966	BCG_3652c	BCG_3653c		canB	FALSE	0.413	109.000	0.333	NA		NA
2101968	2101969	BCG_3655c	BCG_3656c	PE_PGRS58		FALSE	0.084	111.000	0.000	NA		NA
2101970	2101971	BCG_3657	BCG_3658	TB11.2	lpqF	TRUE	0.587	-22.000	0.160	NA		NA
2101971	2101972	BCG_3658	BCG_3659	lpqF		FALSE	0.042	147.000	0.000	NA		NA
2101973	2101974	BCG_3660c	BCG_3661c	PE_PGRS59	clpC	FALSE	0.093	108.000	0.000	NA		NA
2101974	2101975	BCG_3661c	BCG_3662c	clpC	lsr2	FALSE	0.007	277.000	0.000	NA		NA
2101975	2101976	BCG_3662c	BCG_3663c	lsr2	lysS	FALSE	0.365	104.000	0.247	NA		NA
2101976	2101977	BCG_3663c	BCG_3664c	lysS		FALSE	0.130	101.000	0.015	1.000	N	NA
2101977	2101978	BCG_3664c	BCG_3665c		panD	TRUE	0.814	3.000	0.030	1.000	N	NA
2101978	2101979	BCG_3665c	BCG_3666c	panD	panC	TRUE	0.994	0.000	0.342	1.000	Y	NA
2101979	2101980	BCG_3666c	BCG_3667c	panC		TRUE	0.961	-3.000	0.067	1.000		NA
2101980	2101981	BCG_3667c	BCG_3668c			FALSE	0.050	185.000	0.054	NA		NA
2101981	2101982	BCG_3668c	BCG_3669c			FALSE	0.073	209.000	0.237	NA		NA
2101982	2101983	BCG_3669c	BCG_3670c		folK	TRUE	0.932	0.000	0.081	NA		NA
2101983	2101984	BCG_3670c	BCG_3671c	folK	folB	TRUE	0.992	-3.000	0.075	1.000	Y	NA
2101984	2101985	BCG_3671c	BCG_3672c	folB	folP1	TRUE	0.978	-7.000	0.471	1.000	Y	NA
2101985	2101986	BCG_3672c	BCG_3673c	folP1	folE	TRUE	0.998	-3.000	0.609	1.000	Y	NA
2101986	2101987	BCG_3673c	BCG_3674c	folE	ftsH	TRUE	0.645	16.000	0.212	1.000	N	NA
2101989	2101990	BCG_3676c	BCG_3677c			FALSE	0.181	34.000	0.000	NA		NA
2101990	2101991	BCG_3677c	BCG_3678c			FALSE	0.110	100.000	0.000	NA		NA
2101991	2101992	BCG_3678c	BCG_3679c			TRUE	0.682	116.000	1.000	NA		NA
2101992	2101993	BCG_3679c	BCG_3680c			TRUE	0.792	74.000	1.000	NA		NA
2101995	2101996	BCG_3682c	BCG_3683c	hpt	mesJ	TRUE	0.985	-3.000	0.137	0.024	N	NA
2101996	2101997	BCG_3683c	BCG_3684c	mesJ		FALSE	0.509	-21.000	0.050	NA		NA
2101997	2101998	BCG_3684c	BCG_3685c			TRUE	0.988	-3.000	0.500	NA		NA
2102001	2102002	BCG_3688	BCG_3689			FALSE	0.157	44.000	0.000	NA		NA
2102002	2102003	BCG_3689	BCG_3690			TRUE	0.950	-3.000	0.081	NA		NA
2102003	2102004	BCG_3690	BCG_3691			FALSE	0.016	211.000	0.000	NA		NA
2102006	2102007	BCG_3693	BCG_3694			FALSE	0.004	343.000	0.000	NA		NA
2102007	2102008	BCG_3694	BCG_3695			FALSE	0.004	385.000	0.000	NA		NA
2102008	2102009	BCG_3695	BCG_3696			TRUE	0.982	0.000	0.000	NA	Y	NA
2102010	2102011	BCG_3697c	BCG_3698c			FALSE	0.131	70.000	0.000	NA		NA
2102011	2102012	BCG_3698c	BCG_3699c		fic	FALSE	0.014	176.000	0.000	1.000	N	NA
2102012	2102013	BCG_3699c	BCG_3700c	fic		TRUE	0.830	11.000	0.250	NA		NA
5582114	2102016	BCG_t42	BCG_3702c	tRNA-Thr		FALSE	0.126	79.000	0.000	NA		NA
2102018	2102019	BCG_3704c	BCG_3705c	topA		FALSE	0.007	353.000	0.008	NA		NA
2102019	2102020	BCG_3705c	BCG_3706c		cspA	FALSE	0.420	140.000	0.611	NA		NA
2102021	2102022	BCG_3707	BCG_3708		PE33	FALSE	0.051	137.000	0.000	NA		NA
2102022	2102023	BCG_3708	BCG_3709	PE33		FALSE	0.005	324.000	0.000	NA		NA
2102023	2102024	BCG_3709	BCG_3710		PE_PGRS60	FALSE	0.002	754.000	0.000	NA		NA
2102024	2102025	BCG_3710	BCG_3711	PE_PGRS60	PE_PGRS61	FALSE	0.544	-6.000	0.000	NA		NA
2102026	2102027	BCG_3712c	BCG_3713c			FALSE	0.286	86.000	0.118	NA		NA
2102027	2102028	BCG_3713c	BCG_3714c			FALSE	0.243	24.000	0.000	NA		NA
2102028	2102029	BCG_3714c	BCG_3715c			TRUE	0.754	10.000	0.080	NA		NA
2102029	2102030	BCG_3715c	BCG_3716c			TRUE	0.913	24.000	0.323	0.001		NA
2102030	2102031	BCG_3716c	BCG_3717c			TRUE	0.998	-3.000	0.659	1.000	Y	NA
2102031	2102032	BCG_3717c	BCG_3718c			TRUE	0.630	102.000	0.776	NA	N	NA
2102034	2102035	BCG_3720c	BCG_3721c		dppD	TRUE	0.965	-3.000	0.104	1.000		NA
2102035	2102036	BCG_3721c	BCG_3722c	dppD	dppC	TRUE	0.993	-3.000	0.725	1.000		NA
2102036	2102037	BCG_3722c	BCG_3723c	dppC	dppB	TRUE	0.968	56.000	0.811	0.015	Y	NA
2102037	2102038	BCG_3723c	BCG_3724c	dppB	dppA	TRUE	0.994	2.000	0.147	0.015	Y	NA
2102041	2102042	BCG_3727	BCG_3728		ephE	TRUE	0.977	1.000	0.494	NA		NA
2102043	2102044	BCG_3729c	BCG_3730c			TRUE	0.947	6.000	0.367	1.000		NA
2102044	2102045	BCG_3730c	BCG_3731c			FALSE	0.254	132.000	0.304	1.000	N	NA
2102045	2102046	BCG_3731c	BCG_3732c		nth	TRUE	0.871	0.000	0.022	1.000	N	NA
2102047	2102048	BCG_3733	BCG_3734			FALSE	0.270	99.000	0.116	NA		NA
2102049	2102050	BCG_3735c	BCG_3736c			TRUE	0.772	7.000	0.039	NA		NA
2102050	2102051	BCG_3736c	BCG_3737c			TRUE	0.589	16.000	0.094	NA		NA
2102052	2102053	BCG_3738	BCG_3739			TRUE	0.999	-3.000	0.709	0.001	Y	NA
2102055	2102056	BCG_3741	BCG_3742	ponA2		FALSE	0.348	69.000	0.072	1.000		NA
2102056	2102057	BCG_3742	BCG_3743			FALSE	0.337	63.000	0.057	1.000		NA
2102057	5582115	BCG_3743	BCG_t43		tRNA-Pro	FALSE	0.135	62.000	0.000	NA		NA
2102059	2102060	BCG_3744c	BCG_3745c	cyp137		FALSE	0.222	26.000	0.000	NA		NA
2102060	2102061	BCG_3745c	BCG_3746c			FALSE	0.011	240.000	0.000	NA		NA
2102061	2102062	BCG_3746c	BCG_3747c			FALSE	0.005	325.000	0.000	NA		NA
2102063	2102064	BCG_3748	BCG_3749			TRUE	0.796	27.000	0.628	NA		NA
2102064	2102065	BCG_3749	BCG_3750			TRUE	0.611	126.000	0.841	NA		NA
2102065	2102066	BCG_3750	BCG_3751		moxR2	TRUE	0.978	-3.000	0.302	NA		NA
2102066	2102067	BCG_3751	BCG_3752	moxR2		FALSE	0.473	134.000	0.648	NA		NA
2102070	2102071	BCG_3755c	BCG_3756c	glpK		FALSE	0.148	50.000	0.000	NA		NA
2102071	2102072	BCG_3756c	BCG_3756A			TRUE	0.876	-3.000	0.000	NA		NA
2102073	2102074	BCG_3757	BCG_3758			TRUE	0.588	22.000	0.200	NA		NA
2102075	2102076	BCG_3759c	BCG_3760c			FALSE	0.387	31.000	0.077	NA		NA
2102076	2102077	BCG_3760c	BCG_3761c			TRUE	0.979	-3.000	0.316	NA		NA
2102077	2102078	BCG_3761c	BCG_3762c			TRUE	0.986	0.000	0.597	NA		NA
2102078	2102079	BCG_3762c	BCG_3763c		gshA	TRUE	0.981	-3.000	0.337	NA		NA
2102079	2102080	BCG_3763c	BCG_3764c	gshA		FALSE	0.133	132.000	0.063	NA		NA
2102080	2102081	BCG_3764c	BCG_3765c			FALSE	0.235	129.000	0.222	NA		NA
2102081	2102082	BCG_3765c	BCG_3766c			TRUE	0.595	111.000	0.667	NA		NA
2102082	2102083	BCG_3766c	BCG_3767c			FALSE	0.263	119.000	0.222	NA		NA
2102083	2102084	BCG_3767c	BCG_3768c		asd	FALSE	0.080	140.000	0.012	NA		NA
2102084	2102085	BCG_3768c	BCG_3769c	asd	ask	TRUE	0.987	1.000	0.119	1.000	Y	NA
2102088	2102089	BCG_3772	BCG_3773		cobQ2	TRUE	0.981	5.000	0.796	1.000		NA
2102090	2102091	BCG_3774c	BCG_3775c		recR	FALSE	0.257	68.000	0.003	1.000		NA
2102091	2102092	BCG_3775c	BCG_3776c	recR		TRUE	0.915	12.000	0.604	NA		NA
2102095	2102096	BCG_3779	BCG_3780			TRUE	0.845	18.000	0.633	1.000	N	NA
2102097	2102098	BCG_3781c	BCG_3782c	dnaZX		FALSE	0.195	90.000	0.061	1.000	N	NA
5582116	2102100	BCG_t44	BCG_3783	tRNA-Ser		FALSE	0.098	106.000	0.000	NA		NA
2102100	2102101	BCG_3783	BCG_3784		cut5	FALSE	0.029	167.000	0.000	NA		NA
2102101	2102102	BCG_3784	BCG_3785	cut5		FALSE	0.238	45.000	0.000	1.000		NA
2102102	2102103	BCG_3785	BCG_3786			FALSE	0.009	207.000	0.000	1.000	N	NA
2102103	2102104	BCG_3786	BCG_3787			FALSE	0.032	341.000	0.000	0.036		NA
2102104	2102105	BCG_3787	BCG_3788			FALSE	0.219	110.000	0.036	1.000		NA
2102105	2102106	BCG_3788	BCG_3789			FALSE	0.025	215.000	0.000	1.000		NA
2102108	2102109	BCG_3791	BCG_3792	ligC		FALSE	0.110	100.000	0.000	NA		NA
2102110	2102111	BCG_3793c	BCG_3794c			FALSE	0.547	14.000	0.029	NA		NA
2102112	2102113	BCG_3795	BCG_3796			FALSE	0.142	57.000	0.000	NA		NA
2102113	2102114	BCG_3796	BCG_3797			TRUE	0.723	4.000	0.000	NA		NA
2102115	2102116	BCG_3798c	BCG_3799c	PPE66		FALSE	0.222	26.000	0.000	NA		NA
2102116	2102117	BCG_3799c	BCG_3800c			TRUE	0.837	0.000	0.000	NA		NA
2102117	2102118	BCG_3800c	BCG_3801c			TRUE	0.876	-3.000	0.000	NA		NA
2102118	2102119	BCG_3801c	BCG_3802c		ctpJ	FALSE	0.071	146.000	0.000	1.000		NA
2102121	2102122	BCG_3804c	BCG_3805c		PE34	FALSE	0.201	73.000	0.012	NA		NA
2102123	2102124	BCG_3806	BCG_3807			FALSE	0.062	130.000	0.000	NA		NA
2102125	2102126	BCG_3808c	BCG_3809c			FALSE	0.206	68.000	0.000	1.000		NA
5582117	2102129	BCG_t45	BCG_3811c	tRNA-Ser		FALSE	0.198	30.000	0.000	NA		NA
2102129	2102130	BCG_3811c	BCG_3812c			FALSE	0.542	16.000	0.053	NA		NA
2102132	2102133	BCG_3814c	BCG_3815c		proZ	TRUE	0.851	6.000	0.136	NA		NA
2102133	2102134	BCG_3815c	BCG_3816c	proZ	proW	TRUE	0.999	-3.000	0.918	0.015	Y	NA
2102134	2102135	BCG_3816c	BCG_3817c	proW	proV	TRUE	0.978	-12.000	0.694	1.000	Y	NA
2102135	2102136	BCG_3817c	BCG_3818c	proV	proX	TRUE	0.731	9.000	0.085	1.000	N	NA
2102138	2102139	BCG_3820c	BCG_3821c	fadE36		FALSE	0.126	79.000	0.000	NA		NA
2102141	2102142	BCG_3823c	BCG_3824c			TRUE	0.958	71.000	0.742	0.032	Y	NA
2102145	2102146	BCG_3827	BCG_3828			FALSE	0.022	186.000	0.000	NA		NA
2102147	2102148	BCG_3829c	BCG_3830c			FALSE	0.098	106.000	0.000	NA		NA
2102148	2102149	BCG_3830c	BCG_3831c			FALSE	0.359	15.000	0.000	NA		NA
2102149	2102150	BCG_3831c	BCG_3832c			FALSE	0.054	135.000	0.000	NA		NA
2102150	5582118	BCG_3832c	BCG_t46		tRNA-Arg	FALSE	0.054	135.000	0.000	NA		NA
5582118	5582119	BCG_t46	BCG_t47	tRNA-Arg	tRNA-Ser	FALSE	0.193	31.000	0.000	NA		NA
2102154	2102155	BCG_3834c	BCG_3835c			TRUE	0.689	5.000	0.000	NA		NA
2102156	2102157	BCG_3836	BCG_3837	echA21	lipE	TRUE	0.663	12.000	0.148	1.000	N	NA
2102157	2102158	BCG_3837	BCG_3838	lipE		FALSE	0.058	157.000	0.000	1.000		NA
2102162	2102163	BCG_3841	BCG_3842			TRUE	0.878	4.000	0.093	NA		NA
2102163	2102164	BCG_3842	BCG_3843		rbfE	TRUE	0.890	4.000	0.136	NA		NA
2102164	2102165	BCG_3843	BCG_3844	rbfE		TRUE	0.978	-3.000	0.303	NA		NA
2102165	2102166	BCG_3844	BCG_3845		rfbD	TRUE	0.969	-3.000	0.220	NA		NA
2102166	2102167	BCG_3845	BCG_3846	rfbD	rfbB	FALSE	0.281	156.000	0.000	NA	Y	NA
2102167	2102168	BCG_3846	BCG_3847	rfbB		FALSE	0.120	84.000	0.000	NA		NA
2102169	2102170	BCG_3848c	BCG_3849c			FALSE	0.045	13.000	0.000	NA	N	NA
2102171	2102172	BCG_3850	BCG_3851			FALSE	0.435	109.000	0.300	1.000		NA
2102172	2102173	BCG_3851	BCG_3852			FALSE	0.363	40.000	0.033	1.000		NA
2102173	2102174	BCG_3852	BCG_3853			TRUE	0.961	1.000	0.242	1.000		NA
2102174	2102175	BCG_3853	BCG_3854			TRUE	0.974	3.000	0.543	NA		NA
2102175	2102176	BCG_3854	BCG_3855		embC	TRUE	0.975	0.000	0.360	NA		NA
2102176	2102177	BCG_3855	BCG_3856	embC	embA	TRUE	0.856	86.000	0.455	0.001		NA
2102177	2102178	BCG_3856	BCG_3857	embA	embB	TRUE	0.996	-3.000	0.400	0.001		NA
2102178	2102179	BCG_3857	BCG_3858	embB		FALSE	0.424	68.000	0.182	1.000		NA
2102179	2102180	BCG_3858	BCG_3859		fadE35	FALSE	0.197	80.000	0.000	1.000		NA
2102180	2102181	BCG_3859	BCG_3860	fadE35		FALSE	0.037	127.000	0.000	1.000	N	NA
2102182	2102183	BCG_3861c	BCG_3862c	accD4	pks13	TRUE	0.992	-3.000	0.800	1.000	N	NA
2102183	2102184	BCG_3862c	BCG_3863c	pks13	fadD32	TRUE	0.988	7.000	0.520	1.000	Y	NA
2102184	2102185	BCG_3863c	BCG_3864c	fadD32		FALSE	0.064	289.000	0.091	0.072		NA
2102185	2102186	BCG_3864c	BCG_3865c		fbpD	FALSE	0.073	198.000	0.136	1.000		NA
2102186	2102187	BCG_3865c	BCG_3866c	fbpD	fbpA	FALSE	0.102	180.000	0.222	NA		NA
2102187	2102188	BCG_3866c	BCG_3867c	fbpA		FALSE	0.006	295.000	0.000	NA		NA
2102188	2102189	BCG_3867c	BCG_3868c			FALSE	0.266	89.000	0.086	NA		NA
2102189	2102190	BCG_3868c	BCG_3869c			TRUE	0.870	7.000	0.136	1.000		NA
2102190	2102191	BCG_3869c	BCG_3870c			TRUE	0.741	29.000	0.500	NA		NA
2102191	2102192	BCG_3870c	BCG_3871c		glf	TRUE	0.953	-3.000	0.105	NA		NA
2102193	2102194	BCG_3872	BCG_3873	pirG		FALSE	0.085	205.000	0.269	NA		NA
2102194	2102195	BCG_3873	BCG_3874		PE_PGRS62	FALSE	0.037	154.000	0.000	NA		NA
2102196	2102197	BCG_3875c	BCG_3876c			TRUE	0.866	15.000	0.154	0.072		NA
2102197	2102198	BCG_3876c	BCG_3877c			TRUE	0.988	18.000	0.750	0.004	Y	NA
2102198	2102199	BCG_3877c	BCG_3878c			TRUE	0.995	4.000	0.267	0.004	Y	NA
2102200	2102201	BCG_3879	BCG_3880			FALSE	0.388	47.000	0.071	1.000		NA
2102201	2102202	BCG_3880	BCG_3881			TRUE	0.979	-3.000	0.250	1.000		NA
2102204	2102205	BCG_3883	BCG_3884			FALSE	0.178	35.000	0.000	NA		NA
2102205	2102206	BCG_3884	BCG_3885			TRUE	0.876	-3.000	0.000	NA		NA
2102207	2102208	BCG_3886c	BCG_3887c	mmpL8	papA1	FALSE	0.087	110.000	0.000	NA		NA
2102208	2102209	BCG_3887c	BCG_3888c	papA1	pks2	FALSE	0.146	51.000	0.000	NA		NA
2102211	2102212	BCG_3890c	BCG_3891c			TRUE	0.987	-3.000	0.000	NA	Y	NA
2102212	2102213	BCG_3891c	BCG_3892c			TRUE	0.680	1.000	0.000	1.000	N	NA
2102213	2102214	BCG_3892c	BCG_3893c			TRUE	0.802	48.000	1.000	1.000	N	NA
2102219	2102220	BCG_3898	BCG_3899			TRUE	0.983	-3.000	0.387	NA		NA
2102221	2102222	BCG_3900c	BCG_3901c		pheA	TRUE	0.901	-3.000	0.079	NA	N	NA
2102223	2102224	BCG_3902	BCG_3903			FALSE	0.388	26.000	0.048	NA		NA
2102224	2102225	BCG_3903	BCG_3904		bfrB	FALSE	0.039	198.000	0.042	NA		NA
2102226	2102227	BCG_3905c	BCG_3906c	glpQ1		TRUE	0.833	6.000	0.087	NA		NA
2102228	2102229	BCG_3907	BCG_3908			FALSE	0.359	15.000	0.000	NA		NA
2102229	2102230	BCG_3908	BCG_3909		sodA	FALSE	0.002	1064.000	0.000	NA		NA
2102230	2102231	BCG_3909	BCG_3910	sodA		FALSE	0.016	211.000	0.000	NA		NA
2102231	2102232	BCG_3910	BCG_3911			FALSE	0.015	255.000	0.008	NA		NA
2102232	2102233	BCG_3911	BCG_3912			FALSE	0.015	265.000	0.000	1.000		NA
2102233	2102234	BCG_3912	BCG_3913			FALSE	0.207	118.000	0.148	NA		NA
2102234	2102235	BCG_3913	BCG_3914			FALSE	0.434	12.000	0.000	NA		NA
2102235	2102236	BCG_3914	BCG_3915		hns	FALSE	0.095	107.000	0.000	NA		NA
2102236	2102237	BCG_3915	BCG_3916	hns	menG	FALSE	0.521	17.000	0.056	NA		NA
2102240	2102241	BCG_3919c	BCG_3920c			TRUE	0.566	9.000	0.000	NA		NA
2102241	2102242	BCG_3920c	BCG_3921c		gltD	FALSE	0.003	425.000	0.000	NA		NA
2102242	2102243	BCG_3921c	BCG_3922c	gltD	gltB	TRUE	0.983	-7.000	0.043	0.000	Y	NA
2102244	2102245	BCG_3923	BCG_3924			FALSE	0.095	107.000	0.000	NA		NA
2102247	2102248	BCG_3926	BCG_3927			FALSE	0.010	243.000	0.000	NA		NA
2102248	2102249	BCG_3927	BCG_3928			TRUE	0.775	88.000	1.000	NA		NA
2102249	2102250	BCG_3928	BCG_3929			TRUE	0.925	3.000	0.200	NA		NA
2102250	2102251	BCG_3929	BCG_3930			FALSE	0.449	39.000	0.200	NA		NA
2102251	2102252	BCG_3930	BCG_3931			TRUE	0.915	-7.000	0.500	NA		NA
2102252	2102253	BCG_3931	BCG_3932			TRUE	0.723	4.000	0.000	NA		NA
2102253	2102254	BCG_3932	BCG_3933			TRUE	0.837	0.000	0.000	NA		NA
2102254	2102255	BCG_3933	BCG_3934			TRUE	0.915	103.000	1.000	0.002		NA
2102256	2102257	BCG_3935c	BCG_3936c			TRUE	0.913	-3.000	0.002	NA		NA
2102257	2102258	BCG_3936c	BCG_3937c			FALSE	0.385	107.000	0.286	NA		NA
2102258	2102259	BCG_3937c	BCG_3938c			TRUE	0.995	-3.000	1.000	NA		NA
2102259	2102260	BCG_3938c	BCG_3939c			FALSE	0.147	222.000	0.000	1.000	Y	NA
2102260	2102261	BCG_3939c	BCG_3940c			TRUE	0.628	70.000	0.500	NA		NA
2102261	2102262	BCG_3940c	BCG_3941c			TRUE	0.995	-3.000	1.000	NA		NA
2102262	2102263	BCG_3941c	BCG_3942c			TRUE	0.935	-15.000	1.000	NA		NA
2102263	2102264	BCG_3942c	BCG_3943c			TRUE	0.991	-3.000	0.667	NA		NA
2102264	2102265	BCG_3943c	BCG_3944c			TRUE	0.876	-3.000	0.000	NA		NA
2102265	2102266	BCG_3944c	BCG_3945c			TRUE	0.678	94.000	0.667	NA		NA
2102266	2102267	BCG_3945c	BCG_3946c		esxC	TRUE	0.974	8.000	1.000	NA		NA
2102267	2102268	BCG_3946c	BCG_3947c	esxC	esxD	TRUE	0.646	36.000	0.400	NA		NA
2102268	2102269	BCG_3947c	BCG_3948c	esxD	PPE69	FALSE	0.084	111.000	0.000	NA		NA
2102269	2102270	BCG_3948c	BCG_3949c	PPE69	PE36	TRUE	0.788	79.000	1.000	NA		NA
2102270	2102271	BCG_3949c	BCG_3950c	PE36		FALSE	0.008	267.000	0.000	NA		NA
2102271	2102272	BCG_3950c	BCG_3951c			TRUE	0.962	5.000	0.000	0.002		NA
2102272	2102273	BCG_3951c	BCG_3952c			TRUE	0.978	1.000	0.500	NA		NA
2102273	2102274	BCG_3952c	BCG_3953c			TRUE	0.615	44.000	0.400	NA		NA
2102274	2102275	BCG_3953c	BCG_3954c			FALSE	0.040	150.000	0.000	NA		NA
2102275	2102276	BCG_3954c	BCG_3955c			FALSE	0.453	162.000	1.000	NA		NA
2102276	2102277	BCG_3955c	BCG_3956c			FALSE	0.184	-393.000	0.000	NA		NA
2102277	2102278	BCG_3956c	BCG_3957c			FALSE	0.544	-6.000	0.000	NA		NA
2102278	2102279	BCG_3957c	BCG_3958c			FALSE	0.090	109.000	0.000	NA		NA
2102279	2102280	BCG_3958c	BCG_3959c			FALSE	0.002	551.000	0.000	NA		NA
2102280	2102281	BCG_3959c	BCG_3960c			TRUE	0.876	-3.000	0.000	NA		NA
2102281	2102282	BCG_3960c	BCG_3961c		esxE	TRUE	0.954	5.000	0.429	NA		NA
2102282	2102283	BCG_3961c	BCG_3962c	esxE	esxF	FALSE	0.282	149.000	0.429	NA		NA
2102283	2102284	BCG_3962c	BCG_3963c	esxF		FALSE	0.132	66.000	0.000	NA		NA
2102284	2102285	BCG_3963c	BCG_3964c		pcnA	FALSE	0.446	25.000	0.078	NA		NA
2102286	2102287	BCG_3965	BCG_3966			TRUE	0.982	-3.000	0.351	NA		NA
2102287	2102288	BCG_3966	BCG_3967			TRUE	0.984	-3.000	0.411	NA		NA
2102288	2102289	BCG_3967	BCG_3968		sigMa_1	TRUE	0.636	35.000	0.306	1.000		NA
2102289	2102290	BCG_3968	BCG_3969	sigMa_1	sigMb_1	FALSE	0.217	-111.000	0.000	NA		NA
2102290	2102291	BCG_3969	BCG_3970	sigMb_1		FALSE	0.340	16.000	0.000	NA		NA
2102291	2102292	BCG_3970	BCG_3971		trxB2_1	FALSE	0.189	94.000	0.015	NA		NA
2102292	2102293	BCG_3971	BCG_3972	trxB2_1	trxC_1	TRUE	0.991	-3.000	0.025	1.000	Y	NA
2102293	2102294	BCG_3972	BCG_3973	trxC_1		FALSE	0.276	110.000	0.237	1.000	N	NA
2102295	2102296	BCG_3974c	BCG_3975c		parB_1	FALSE	0.011	290.000	0.013	NA		NA
2102296	2102297	BCG_3975c	BCG_3976c	parB_1	parA_1	TRUE	0.993	-3.000	0.827	1.000	N	NA
2102297	2102298	BCG_3976c	BCG_3977c	parA_1	gid_1	TRUE	0.978	-3.000	0.339	1.000	N	NA
2102298	2102299	BCG_3977c	BCG_3978c	gid_1		FALSE	0.180	132.000	0.070	1.000		NA
2102299	2102300	BCG_3978c	BCG_3979c			FALSE	0.290	72.000	0.024	1.000		NA
2102300	2102301	BCG_3979c	BCG_3980c			FALSE	0.468	-16.000	0.010	NA		NA
2102301	2102302	BCG_3980c	BCG_3981c		rnpA_1	TRUE	0.989	-3.000	0.540	NA		NA
2102302	2102303	BCG_3981c	BCG_3982c	rnpA_1	rpmH_1	TRUE	0.994	-3.000	0.787	1.000		NA