MicrobesOnline Operon Predictions for Mycoplasma hyopneumoniae 7448

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 866552 866553 MHP7448_0001 MHP7448_0002 dnaA dnaN TRUE 0.627 145.000 0.004 1.000 Y NA
 866553 866554 MHP7448_0002 MHP7448_0003 dnaN gidA FALSE 0.124 131.000 0.000 1.000 N NA
 866554 866555 MHP7448_0003 MHP7448_0004 gidA   TRUE 0.973 12.000 0.010 NA   NA
 866555 866556 MHP7448_0004 MHP7448_0005     TRUE 0.950 14.000 0.004 NA   NA
 866556 866557 MHP7448_0005 MHP7448_0006     TRUE 0.994 2.000 0.583 0.011   NA
 866557 866558 MHP7448_0006 MHP7448_0007     TRUE 0.598 29.000 0.000 NA   NA
 866558 866559 MHP7448_0007 MHP7448_0008   ftsY FALSE 0.198 90.000 0.000 NA   NA
 866559 866560 MHP7448_0008 MHP7448_0009 ftsY   FALSE 0.080 167.000 0.000 1.000   NA
 866560 866561 MHP7448_0009 MHP7448_0010   hrcA FALSE 0.127 86.000 0.000 1.000   NA
 866561 866562 MHP7448_0010 MHP7448_0011 hrcA grpE TRUE 0.992 -3.000 0.015 1.000 N NA
 866562 866563 MHP7448_0011 MHP7448_0012 grpE argS TRUE 0.968 -16.000 0.002 1.000 N NA
 866563 866564 MHP7448_0012 MHP7448_0013 argS   TRUE 0.971 5.000 0.010 1.000   NA
 866564 866565 MHP7448_0013 MHP7448_0014   fba TRUE 0.848 69.000 0.043 1.000   NA
 866565 866566 MHP7448_0014 MHP7448_0015 fba rluC TRUE 0.960 7.000 0.005 1.000 N NA
 866569 866570 MHP7448_0018 MHP7448_0019     FALSE 0.138 146.000 0.000 NA   NA
 866570 866571 MHP7448_0019 MHP7448_0020     FALSE 0.079 201.000 0.000 0.059 N NA
 866571 866572 MHP7448_0020 MHP7448_0021     TRUE 0.356 74.000 0.000 0.059 Y NA
 866572 866573 MHP7448_0021 MHP7448_0022     TRUE 0.929 -13.000 0.000 NA   NA
 866573 866574 MHP7448_0022 MHP7448_0023     FALSE 0.130 302.000 0.000 NA   NA
 866574 866575 MHP7448_0023 MHP7448_0024     FALSE 0.099 111.000 0.000 0.036 N NA
 866575 866576 MHP7448_0024 MHP7448_0025     TRUE 0.929 -13.000 0.000 NA   NA
 866577 866578 MHP7448_0026 MHP7448_0027 sipS gatC FALSE 0.164 68.000 0.000 1.000   NA
 866578 866579 MHP7448_0027 MHP7448_0028 gatC gatA TRUE 0.997 -10.000 0.643 0.007   NA
 866579 866580 MHP7448_0028 MHP7448_0029 gatA gatB TRUE 0.998 -7.000 0.492 0.007 Y NA
 866580 866581 MHP7448_0029 MHP7448_0030 gatB   FALSE 0.129 231.000 0.000 NA   NA
 866582 866583 MHP7448_0031 MHP7448_0032 lsp ileS TRUE 0.921 44.000 0.019 1.000 N NA
 866583 866584 MHP7448_0032 MHP7448_0033 ileS parC TRUE 0.972 -3.000 0.003 1.000 N NA
 866584 866585 MHP7448_0033 MHP7448_0034 parC parE TRUE 0.998 -7.000 0.552 0.009 Y NA
 866586 866587 MHP7448_0035 MHP7448_0036 gap   FALSE 0.146 129.000 0.000 NA   NA
 866588 866589 MHP7448_0037 MHP7448_0038 vacB cls FALSE 0.111 299.000 0.000 1.000 N NA
 866589 866590 MHP7448_0038 MHP7448_0039 cls recA TRUE 0.924 5.000 0.002 1.000 N NA
 866591 866592 MHP7448_0040 MHP7448_0041 licA obg TRUE 0.921 2.000 0.002 1.000   NA
 866592 866593 MHP7448_0041 MHP7448_0042 obg   FALSE 0.174 103.000 0.000 NA   NA
 866593 866594 MHP7448_0042 MHP7448_0043     TRUE 0.840 4.000 0.000 NA   NA
 866594 866595 MHP7448_0043 MHP7448_0044     TRUE 0.997 2.000 0.600 NA   NA
 866595 866596 MHP7448_0044 MHP7448_0045   dinP TRUE 0.620 27.000 0.000 NA   NA
 866596 866597 MHP7448_0045 MHP7448_0046 dinP   TRUE 0.823 5.000 0.000 NA   NA
 866597 866598 MHP7448_0046 MHP7448_0047   atpB TRUE 0.983 -3.000 0.005 NA   NA
 866598 866599 MHP7448_0047 MHP7448_0048 atpB atpE TRUE 0.983 28.000 0.085 0.018 Y NA
 866599 866600 MHP7448_0048 MHP7448_0049 atpE atpF TRUE 0.988 30.000 0.500 0.018 Y NA
 866600 866601 MHP7448_0049 MHP7448_0050 atpF atpH TRUE 0.991 6.000 0.022 0.018 Y NA
 866601 866602 MHP7448_0050 MHP7448_0051 atpH atpA-1 TRUE 0.993 16.000 0.864 0.018 Y NA
 866602 866603 MHP7448_0051 MHP7448_0052 atpA-1 atpG TRUE 0.985 29.000 0.846 0.018 Y NA
 866603 866604 MHP7448_0052 MHP7448_0053 atpG atpD TRUE 0.993 18.000 0.724 0.018 Y NA
 866604 866605 MHP7448_0053 MHP7448_0054 atpD   FALSE 0.078 355.000 0.000 1.000   NA
 866605 866606 MHP7448_0054 MHP7448_0055   rpsB FALSE 0.051 270.000 0.000 0.093   NA
 866606 866607 MHP7448_0055 MHP7448_0056 rpsB tsf TRUE 0.992 25.000 0.748 1.000 Y NA
 866607 866608 MHP7448_0056 MHP7448_0057 tsf ffh TRUE 0.329 85.000 0.002 1.000 N NA
 866608 866609 MHP7448_0057 MHP7448_0058 ffh glyS TRUE 0.777 25.000 0.002 1.000 N NA
 866609 866610 MHP7448_0058 MHP7448_0059 glyS dnaG TRUE 0.994 -7.000 0.019 1.000 N NA
 866610 866611 MHP7448_0059 MHP7448_0060 dnaG rpoD TRUE 0.843 582.000 0.205 1.000 N NA
 866611 866612 MHP7448_0060 MHP7448_0061 rpoD   TRUE 0.984 7.000 0.016 NA   NA
 866612 866613 MHP7448_0061 MHP7448_0062   nfo TRUE 0.982 -6.000 0.004 NA   NA
 866613 866614 MHP7448_0062 MHP7448_0063 nfo tyrS TRUE 0.933 17.000 0.004 1.000 N NA
 866614 866615 MHP7448_0063 MHP7448_0064 tyrS   FALSE 0.115 406.000 0.000 1.000 N NA
 866615 866616 MHP7448_0064 MHP7448_0065     FALSE 0.096 114.000 0.000 1.000   NA
 866618 866619 MHP7448_0067 MHP7448_0068 dnaK dnaJ FALSE 0.198 217.000 0.000 0.009 Y NA
 866619 866620 MHP7448_0068 MHP7448_0069 dnaJ cmk TRUE 0.272 59.000 0.000 1.000 N NA
 866620 866621 MHP7448_0069 MHP7448_0070 cmk engA TRUE 0.980 15.000 0.060 0.038   NA
 866621 866622 MHP7448_0070 MHP7448_0071 engA himA TRUE 0.710 34.000 0.002 1.000   NA
 866622 866623 MHP7448_0071 MHP7448_0072 himA   TRUE 0.856 3.000 0.000 NA   NA
 866623 866624 MHP7448_0072 MHP7448_0073   lepA TRUE 0.887 1.000 0.000 NA   NA
 866624 866625 MHP7448_0073 MHP7448_0074 lepA   TRUE 0.462 62.000 0.002 NA   NA
 866626 866627 MHP7448_0075 MHP7448_0076 fusA rpsG TRUE 0.996 10.000 0.579 1.000 Y NA
 866627 866628 MHP7448_0076 MHP7448_0077 rpsG rpsL TRUE 0.969 53.000 0.224 0.018 Y NA
 866628 866629 MHP7448_0077 MHP7448_0078 rpsL   FALSE 0.144 131.000 0.000 NA   NA
 866629 866630 MHP7448_0078 MHP7448_0079     TRUE 0.995 4.000 0.500 NA   NA
 866630 866631 MHP7448_0079 MHP7448_0080     TRUE 0.993 12.000 0.667 NA   NA
 866632 866633 MHP7448_0081 MHP7448_0082   nox FALSE 0.077 215.000 0.000 1.000   NA
 866634 866635 MHP7448_0083 MHP7448_0084 deoA deoD TRUE 0.990 5.000 0.013 1.000 Y NA
 866635 866636 MHP7448_0084 MHP7448_0085 deoD   TRUE 0.914 89.000 0.500 NA   NA
 866636 866637 MHP7448_0085 MHP7448_0086   secA TRUE 0.710 156.000 0.017 NA   NA
 866637 866638 MHP7448_0086 MHP7448_0679 secA   FALSE 0.130 311.000 0.000 NA   NA
 866638 866639 MHP7448_0679 MHP7448_0680     TRUE 0.875 2.000 0.000 NA   NA
 866639 866640 MHP7448_0680 MHP7448_0681     TRUE 0.856 3.000 0.000 NA   NA
 866640 866641 MHP7448_0681 MHP7448_0682     TRUE 0.381 52.000 0.000 NA   NA
 866641 866642 MHP7448_0682 MHP7448_0683     TRUE 0.823 5.000 0.000 NA   NA
 866642 866643 MHP7448_0683 MHP7448_0684     TRUE 0.347 56.000 0.000 NA   NA
 866643 866644 MHP7448_0684 MHP7448_0685     TRUE 0.823 5.000 0.000 NA   NA
 866644 866645 MHP7448_0685 MHP7448_0686     TRUE 0.811 7.000 0.000 NA   NA
 866645 866646 MHP7448_0686 MHP7448_0687     FALSE 0.213 82.000 0.000 NA   NA
 866648 866649 MHP7448_0088 MHP7448_0089     TRUE 0.638 26.000 0.000 NA   NA
 866651 866652 MHP7448_0091 MHP7448_0092 uvrA   TRUE 0.794 23.000 0.002 1.000   NA
 866652 866653 MHP7448_0092 MHP7448_0093     FALSE 0.130 208.000 0.000 NA   NA
 866656 866657 MHP7448_0688 MHP7448_0096   tpx FALSE 0.141 138.000 0.000 NA   NA
 866657 866658 MHP7448_0096 MHP7448_0097 tpx lgt FALSE 0.119 529.000 0.000 1.000 N NA
 866658 866659 MHP7448_0097 MHP7448_0098 lgt trxB TRUE 0.810 137.000 0.101 1.000 N NA
 866659 866660 MHP7448_0098 MHP7448_0099 trxB   TRUE 0.967 25.000 0.017 NA   NA
 866660 866661 MHP7448_0099 MHP7448_0100     FALSE 0.181 99.000 0.000 NA   NA
 866663 866664 MHP7448_0102 MHP7448_0103 tpiA rpsO TRUE 0.283 119.000 0.002 1.000 N NA
 866664 866665 MHP7448_0103 MHP7448_0104 rpsO rnpB FALSE 0.176 102.000 0.000 NA   NA
 866665 866666 MHP7448_0104 MHP7448_0105 rnpB   TRUE 0.572 31.000 0.000 NA   NA
 866667 866668 MHP7448_0106 MHP7448_0107     FALSE 0.129 226.000 0.000 NA   NA
 866668 866669 MHP7448_0107 MHP7448_0108     TRUE 0.710 21.000 0.000 NA   NA
 866669 866670 MHP7448_0108 MHP7448_0109   gyrB FALSE 0.129 261.000 0.000 NA   NA
 866670 866671 MHP7448_0109 MHP7448_0110 gyrB   TRUE 0.253 298.000 0.000 1.000 Y NA
 866671 866672 MHP7448_0110 MHP7448_0111   pfkA FALSE 0.116 464.000 0.000 1.000 N NA
 866672 866673 MHP7448_0111 MHP7448_0689 pfkA   TRUE 0.284 62.000 0.000 NA   NA
 866673 866674 MHP7448_0689 MHP7448_0690     TRUE 0.840 4.000 0.000 NA   NA
 866675 866676 MHP7448_0112 MHP7448_0113     TRUE 0.936 64.000 0.667 NA   NA
 866676 866677 MHP7448_0113 MHP7448_0114   apt TRUE 0.690 19.000 0.000 1.000 N NA
 866677 866678 MHP7448_0114 MHP7448_0115 apt pdhA FALSE 0.113 191.000 0.000 1.000 N NA
 866678 866679 MHP7448_0115 MHP7448_0116 pdhA pdhB TRUE 0.998 0.000 0.458 0.004 Y NA
 866681 866682 MHP7448_0117 MHP7448_0118     TRUE 0.800 9.000 0.000 NA   NA
 866684 866685 MHP7448_0120 MHP7448_0121     TRUE 0.823 5.000 0.000 NA   NA
 866686 866687 MHP7448_0122 MHP7448_0123 rpmB rplT TRUE 0.713 56.000 0.002 0.078 Y NA
 866687 866688 MHP7448_0123 MHP7448_0124 rplT rpmI TRUE 0.930 46.000 0.928 0.078   NA
 866688 866689 MHP7448_0124 MHP7448_0125 rpmI infC TRUE 0.997 -7.000 0.652 1.000   NA
 866689 866690 MHP7448_0125 MHP7448_0126 infC pyk FALSE 0.111 239.000 0.000 1.000 N NA
 866690 866691 MHP7448_0126 MHP7448_0127 pyk   TRUE 0.767 105.000 0.019 NA   NA
 866693 866694 MHP7448_0129 MHP7448_0130   ung TRUE 0.946 52.000 0.125 1.000 N NA
 866695 866696 MHP7448_0131 MHP7448_0132 rplU rpmA TRUE 0.996 9.000 0.667 0.078 Y NA
 866698 866699 MHP7448_0134 MHP7448_0135 scr   TRUE 0.308 59.000 0.000 NA   NA
 866699 866700 MHP7448_0135 MHP7448_0136     FALSE 0.129 228.000 0.000 NA   NA
 866700 866701 MHP7448_0136 MHP7448_0137   ldh TRUE 0.870 127.000 0.133 NA N NA
 866701 866702 MHP7448_0137 MHP7448_0138 ldh   FALSE 0.076 248.000 0.000 1.000   NA
 866704 866705 MHP7448_0139 MHP7448_0140 prfA hemK TRUE 0.998 -7.000 0.081 1.000 Y NA
 866705 866706 MHP7448_0140 MHP7448_0141 hemK gltX TRUE 0.519 58.000 0.000 1.000 Y NA
 866706 866707 MHP7448_0141 MHP7448_0142 gltX   TRUE 0.648 15.000 0.000 1.000   NA
 866707 866708 MHP7448_0142 MHP7448_0143     FALSE 0.139 77.000 0.000 1.000   NA
 866708 866709 MHP7448_0143 MHP7448_0144     TRUE 0.994 -4.000 0.014 0.006 Y NA
 866711 866712 MHP7448_0145 MHP7448_0146     TRUE 0.999 -16.000 0.273 0.004 Y NA
 866712 866713 MHP7448_0146 MHP7448_0147     TRUE 0.986 10.000 0.061 1.000   NA
 866713 866714 MHP7448_0147 MHP7448_0148     TRUE 0.634 16.000 0.000 1.000   NA
 866714 866715 MHP7448_0148 MHP7448_0149   tig TRUE 0.415 214.000 0.002 0.012 Y NA
 866716 866717 MHP7448_0150 MHP7448_0151   rpe TRUE 0.823 5.000 0.000 NA   NA
 866717 866718 MHP7448_0151 MHP7448_0152 rpe   TRUE 0.990 -7.000 0.012 1.000   NA
 866718 866719 MHP7448_0152 MHP7448_0153   gmk TRUE 0.951 1.000 0.002 1.000   NA
 866719 866720 MHP7448_0153 MHP7448_0154 gmk   TRUE 0.993 -19.000 0.009 NA N NA
 866720 866721 MHP7448_0154 MHP7448_0155     TRUE 0.938 27.000 0.002 NA Y NA
 866721 866722 MHP7448_0155 MHP7448_0156   era TRUE 0.775 480.000 0.108 1.000   NA
 866722 866723 MHP7448_0156 MHP7448_0157 era cdd TRUE 0.965 7.000 0.009 1.000   NA
 866723 866724 MHP7448_0157 MHP7448_0158 cdd   TRUE 0.980 0.000 0.004 NA   NA
 866724 866725 MHP7448_0158 MHP7448_0159     TRUE 0.896 18.000 0.002 NA   NA
 866725 866726 MHP7448_0159 MHP7448_0160     TRUE 0.994 2.000 0.077 NA   NA
 866727 866728 MHP7448_0161 MHP7448_0162 deoB   FALSE 0.112 324.000 0.000 1.000 N NA
 866728 866729 MHP7448_0162 MHP7448_0163   tlyA TRUE 0.341 434.000 0.003 0.052 N NA
 866729 866730 MHP7448_0163 MHP7448_0164 tlyA nifS TRUE 0.990 -7.000 0.010 1.000 N NA
 866730 866731 MHP7448_0164 MHP7448_0165 nifS   TRUE 0.996 -10.000 0.053 1.000 N NA
 866731 866732 MHP7448_0165 MHP7448_0166   rluB TRUE 0.985 -10.000 0.004 1.000 N NA
 866733 866734 MHP7448_0167 MHP7448_0168 rplQ rpoA TRUE 0.994 3.000 0.873 1.000 N NA
 866734 866735 MHP7448_0168 MHP7448_0169 rpoA rpsK TRUE 0.994 7.000 0.308 1.000 N NA
 866735 866736 MHP7448_0169 MHP7448_0170 rpsK rpsM TRUE 0.997 3.000 0.810 0.076 Y NA
 866736 866737 MHP7448_0170 MHP7448_0171 rpsM rpmJ TRUE 0.783 145.000 0.194 0.076   NA
 866737 866738 MHP7448_0171 MHP7448_0172 rpmJ infA TRUE 0.938 46.000 0.104 1.000   NA
 866738 866739 MHP7448_0172 MHP7448_0173 infA map TRUE 0.994 10.000 0.051 1.000 Y NA
 866739 866740 MHP7448_0173 MHP7448_0174 map adk TRUE 0.996 -9.000 0.041 1.000 N NA
 866740 866741 MHP7448_0174 MHP7448_0175 adk secY TRUE 0.915 46.000 0.019 1.000 N NA
 866741 866742 MHP7448_0175 MHP7448_0176 secY rplO TRUE 0.981 0.000 0.005 1.000 N NA
 866742 866743 MHP7448_0176 MHP7448_0177 rplO rpsE TRUE 0.914 119.000 0.148 1.000 Y NA
 866743 866744 MHP7448_0177 MHP7448_0178 rpsE rplR TRUE 0.998 2.000 0.814 1.000 Y NA
 866744 866745 MHP7448_0178 MHP7448_0179 rplR rplF TRUE 0.998 0.000 0.815 0.076 Y NA
 866745 866746 MHP7448_0179 MHP7448_0180 rplF rpsH TRUE 0.995 7.000 0.808 0.076 Y NA
 866746 866747 MHP7448_0180 MHP7448_0181 rpsH rpsN TRUE 0.996 6.000 0.473 0.076 Y NA
 866747 866748 MHP7448_0181 MHP7448_0182 rpsN rplE TRUE 0.976 47.000 0.496 0.076 Y NA
 866748 866749 MHP7448_0182 MHP7448_0183 rplE rplX TRUE 0.996 7.000 0.758 0.076 Y NA
 866749 866750 MHP7448_0183 MHP7448_0184 rplX rplN TRUE 0.996 5.000 0.810 1.000 Y NA
 866750 866751 MHP7448_0184 MHP7448_0185 rplN rpsQ TRUE 0.998 2.000 0.791 1.000 Y NA
 866751 866752 MHP7448_0185 MHP7448_0186 rpsQ rpmC TRUE 0.995 8.000 0.828 0.076 Y NA
 866752 866753 MHP7448_0186 MHP7448_0187 rpmC rplP TRUE 0.996 5.000 0.802 0.076 Y NA
 866753 866754 MHP7448_0187 MHP7448_0188 rplP rpsC TRUE 0.997 3.000 0.828 1.000 Y NA
 866754 866755 MHP7448_0188 MHP7448_0189 rpsC rplV TRUE 0.998 0.000 0.719 1.000 Y NA
 866755 866756 MHP7448_0189 MHP7448_0190 rplV rpsS TRUE 0.986 35.000 0.769 1.000 Y NA
 866756 866757 MHP7448_0190 MHP7448_0191 rpsS rplB TRUE 0.998 0.000 0.820 1.000 Y NA
 866757 866758 MHP7448_0191 MHP7448_0192 rplB rplW TRUE 0.891 121.000 0.849 0.052 Y NA
 866758 866759 MHP7448_0192 MHP7448_0193 rplW rplD TRUE 0.997 4.000 0.307 0.076 Y NA
 866759 866760 MHP7448_0193 MHP7448_0194 rplD rplC TRUE 0.994 17.000 0.544 0.076 Y NA
 866760 866761 MHP7448_0194 MHP7448_0195 rplC rpsJ TRUE 0.998 2.000 0.467 1.000 Y NA
 866763 866764 MHP7448_0197 MHP7448_0198     FALSE 0.134 412.000 0.000 NA   NA
 866764 866765 MHP7448_0198 MHP7448_0199     TRUE 0.710 21.000 0.000 NA   NA
 866767 866768 MHP7448_0201 MHP7448_0202 alaS   TRUE 0.984 15.000 0.032 1.000 N NA
 866768 866769 MHP7448_0202 MHP7448_0203     TRUE 0.814 6.000 0.000 NA   NA
 866769 866770 MHP7448_0203 MHP7448_0204   pth TRUE 0.546 34.000 0.000 NA   NA
 866770 866771 MHP7448_0204 MHP7448_0205 pth   TRUE 0.985 11.000 0.025 1.000 N NA
 866771 866772 MHP7448_0205 MHP7448_0206   ftsH TRUE 0.956 37.000 0.051 1.000 N NA
 866772 866773 MHP7448_0206 MHP7448_0207 ftsH lysS TRUE 0.399 120.000 0.003 1.000 N NA
 866773 866774 MHP7448_0207 MHP7448_0208 lysS   TRUE 0.972 2.000 0.005 1.000   NA
 866775 866776 MHP7448_0209 MHP7448_0210 trmE   TRUE 0.678 44.000 0.003 1.000   NA
 866777 866778 MHP7448_0211 MHP7448_0212   oppB-1 FALSE 0.135 459.000 0.000 NA   NA
 866778 866779 MHP7448_0212 MHP7448_0213 oppB-1 oppC-1 TRUE 0.991 18.000 1.000 0.038 Y NA
 866779 866780 MHP7448_0213 MHP7448_0214 oppC-1 oppD TRUE 0.945 86.000 0.692 1.000 Y NA
 866780 866781 MHP7448_0214 MHP7448_0215 oppD oppF-1 TRUE 0.769 176.000 0.769 0.008   NA
 866781 866782 MHP7448_0215 MHP7448_0216 oppF-1   TRUE 0.994 2.000 0.167 1.000   NA
 866782 866783 MHP7448_0216 MHP7448_0217     TRUE 0.985 20.000 0.167 1.000   NA
 866783 866784 MHP7448_0217 MHP7448_0218     FALSE 0.111 234.000 0.000 1.000 N NA
 866785 866786 MHP7448_0219 MHP7448_0220     FALSE 0.143 711.000 0.000 NA   NA
 866786 866787 MHP7448_0220 MHP7448_0221   nrdE FALSE 0.202 89.000 0.000 NA   NA
 866787 866788 MHP7448_0221 MHP7448_0222 nrdE nrdI TRUE 0.949 76.000 1.000 NA Y NA
 866788 866789 MHP7448_0222 MHP7448_0223 nrdI nrdF TRUE 0.998 2.000 0.643 NA Y NA
 866789 866790 MHP7448_0223 MHP7448_0224 nrdF glyA FALSE 0.131 2757.000 0.000 1.000 N NA
 866791 866792 MHP7448_0225 MHP7448_0226   iolC TRUE 0.879 0.000 0.000 1.000 N NA
 866792 866793 MHP7448_0226 MHP7448_0227 iolC iolB TRUE 0.992 5.000 0.241 1.000   NA
 866793 866794 MHP7448_0227 MHP7448_0228 iolB   TRUE 0.985 8.000 0.042 1.000   NA
 866794 866795 MHP7448_0228 MHP7448_0229   iolD TRUE 0.995 0.000 0.140 1.000   NA
 866795 866796 MHP7448_0229 MHP7448_0230 iolD iolE TRUE 0.989 9.000 0.081 1.000 N NA
 866796 866797 MHP7448_0230 MHP7448_0231 iolE mglA TRUE 0.712 36.000 0.000 1.000 Y NA
 866797 866799 MHP7448_0231 MHP7448_0233 mglA   TRUE 0.281 835.000 0.000 1.000 Y NA
 866799 866800 MHP7448_0233 MHP7448_0234   rbsB TRUE 0.877 23.000 0.000 NA Y NA
 866800 866801 MHP7448_0234 MHP7448_0235 rbsB   TRUE 0.685 23.000 0.000 NA   NA
 866801 866802 MHP7448_0235 MHP7448_0236     FALSE 0.076 234.000 0.000 1.000   NA
 866803 866804 MHP7448_0237 MHP7448_0238     TRUE 0.840 4.000 0.000 NA   NA
 866804 866805 MHP7448_0238 MHP7448_0239     FALSE 0.133 378.000 0.000 NA   NA
 866805 866806 MHP7448_0239 MHP7448_0240     TRUE 0.875 2.000 0.000 NA   NA
 866807 866808 MHP7448_0241 MHP7448_0242 secD hisS TRUE 0.478 90.000 0.003 1.000 N NA
 866808 866809 MHP7448_0242 MHP7448_0243 hisS aspS TRUE 0.995 11.000 0.161 0.074 Y NA
 866809 866810 MHP7448_0243 MHP7448_0244 aspS   TRUE 0.294 75.000 0.000 NA N NA
 866810 866811 MHP7448_0244 MHP7448_0245   rpsT FALSE 0.140 141.000 0.000 NA   NA
 866812 866813 MHP7448_0246 MHP7448_0247     TRUE 0.291 45.000 0.000 1.000   NA
 866813 866814 MHP7448_0247 MHP7448_0248     TRUE 0.968 39.000 1.000 NA N NA
 866814 866815 MHP7448_0248 MHP7448_0249   smf FALSE 0.170 308.000 0.000 NA N NA
 866816 866817 MHP7448_0250 MHP7448_0251 eno serS TRUE 0.937 6.000 0.003 1.000 N NA
 866817 866818 MHP7448_0251 MHP7448_0252 serS   FALSE 0.179 101.000 0.000 NA   NA
 866819 866820 MHP7448_0253 MHP7448_0254 lip lplA TRUE 0.996 1.000 0.400 1.000   NA
 866820 866821 MHP7448_0254 MHP7448_0255 lplA   TRUE 0.993 14.000 0.333 NA   NA
 866822 866823 MHP7448_0256 MHP7448_0257 dnaX   TRUE 0.849 107.000 0.100 NA   NA
 866823 866824 MHP7448_0257 MHP7448_0258   recR TRUE 0.996 3.000 0.604 NA   NA
 866824 866825 MHP7448_0258 MHP7448_0259 recR tmk TRUE 0.992 -3.000 0.015 1.000 N NA
 866825 866826 MHP7448_0259 MHP7448_0260 tmk   TRUE 0.959 41.000 0.254 1.000   NA
 866826 866827 MHP7448_0260 MHP7448_0261     TRUE 0.654 130.000 0.016 1.000   NA
 866827 866828 MHP7448_0261 MHP7448_0262   hpt TRUE 0.411 33.000 0.000 1.000   NA
 866828 866829 MHP7448_0262 MHP7448_0263 hpt   TRUE 0.934 29.000 0.011 1.000 N NA
 866829 866830 MHP7448_0263 MHP7448_0264     TRUE 0.999 -27.000 0.713 0.050 Y NA
 866830 866831 MHP7448_0264 MHP7448_0265     TRUE 0.998 -10.000 0.095 1.000 Y NA
 866831 866832 MHP7448_0265 MHP7448_0266   lig TRUE 0.980 1.000 0.005 1.000 N NA
 866832 866833 MHP7448_0266 MHP7448_0267 lig   TRUE 0.243 70.000 0.000 NA   NA
 866835 866836 MHP7448_0269 MHP7448_0270 smpB   TRUE 0.954 0.000 0.002 1.000 N NA
 866837 866838 MHP7448_0271 MHP7448_0272     FALSE 0.187 96.000 0.000 NA   NA
 866839 866840 MHP7448_0273 MHP7448_0274 pheS pheT TRUE 0.964 11.000 0.004 0.004 Y NA
 866840 866841 MHP7448_0274 MHP7448_0275 pheT rpmF TRUE 0.504 59.000 0.000 1.000 Y NA
 866841 866842 MHP7448_0275 MHP7448_0694 rpmF   FALSE 0.156 120.000 0.000 NA   NA
 866842 866843 MHP7448_0694 MHP7448_0695     TRUE 0.840 4.000 0.000 NA   NA
 866843 866844 MHP7448_0695 MHP7448_0696     TRUE 0.806 8.000 0.000 NA   NA
 866844 866845 MHP7448_0696 MHP7448_0697     TRUE 0.823 5.000 0.000 NA   NA
 866845 866846 MHP7448_0697 MHP7448_0698     TRUE 0.520 36.000 0.000 NA   NA
 866846 866847 MHP7448_0698 MHP7448_0276   truB TRUE 0.363 54.000 0.000 NA   NA
 866847 866848 MHP7448_0276 MHP7448_0277 truB   TRUE 0.989 2.000 0.022 1.000   NA
 866848 866849 MHP7448_0277 MHP7448_0278     TRUE 0.991 2.000 0.037 1.000   NA
 866852 866853 MHP7448_0281 MHP7448_0282 pgsA   TRUE 0.856 3.000 0.000 NA   NA
 866853 866854 MHP7448_0282 MHP7448_0283   topA TRUE 0.572 31.000 0.000 NA   NA
 866854 866855 MHP7448_0283 MHP7448_0284 topA rplS TRUE 0.902 -7.000 0.000 1.000 N NA
 866855 866856 MHP7448_0284 MHP7448_0285 rplS trmD TRUE 0.977 53.000 0.567 1.000 Y NA
 866856 866857 MHP7448_0285 MHP7448_0286 trmD rpsP TRUE 0.988 22.000 0.033 1.000 Y NA
 866857 866858 MHP7448_0286 MHP7448_0287 rpsP   FALSE 0.129 253.000 0.000 NA   NA
 866860 866861 MHP7448_0289 MHP7448_0290     FALSE 0.132 189.000 0.000 NA   NA
 866861 866862 MHP7448_0290 MHP7448_0291     FALSE 0.171 105.000 0.000 NA   NA
 866862 866863 MHP7448_0291 MHP7448_0292     TRUE 0.788 12.000 0.000 NA   NA
 866864 866865 MHP7448_0293 MHP7448_0294 ychF rpsR TRUE 0.946 10.000 0.002 1.000 Y NA
 866865 866866 MHP7448_0294 MHP7448_0295 rpsR ssb TRUE 0.953 18.000 0.008 1.000 N NA
 866866 866867 MHP7448_0295 MHP7448_0296 ssb rpsF TRUE 0.701 18.000 0.000 1.000 N NA
 866867 866868 MHP7448_0296 MHP7448_0297 rpsF   FALSE 0.145 752.000 0.000 NA   NA
 866868 866869 MHP7448_0297 MHP7448_0298     TRUE 0.470 39.000 0.000 NA   NA
 866870 866871 MHP7448_0299 MHP7448_0300     FALSE 0.089 1003.000 0.000 1.000   NA
 866871 866872 MHP7448_0300 MHP7448_0301     TRUE 0.347 56.000 0.000 NA   NA
 866872 866873 MHP7448_0301 MHP7448_0302     FALSE 0.142 135.000 0.000 NA   NA
 866873 866874 MHP7448_0302 MHP7448_0303   ugpQ TRUE 0.998 -7.000 0.778 NA N NA
 866876 866877 MHP7448_0305 MHP7448_0306     FALSE 0.134 78.000 0.000 0.030 N NA
 866877 866878 MHP7448_0306 MHP7448_0307     TRUE 0.935 -34.000 0.000 NA   NA
 866880 866881 MHP7448_0309 MHP7448_0310 baiH lplA-1 TRUE 0.993 3.000 0.100 1.000 N NA
 866881 866882 MHP7448_0310 MHP7448_0311 lplA-1   TRUE 0.993 3.000 0.071 1.000 N NA
 866882 866883 MHP7448_0311 MHP7448_0312     TRUE 0.996 2.000 0.214 1.000 N NA
 866884 866885 MHP7448_0313 MHP7448_0314     TRUE 0.856 3.000 0.000 NA   NA
 866885 866886 MHP7448_0314 MHP7448_0315     TRUE 0.294 91.000 0.000 0.030 Y NA
 866886 866887 MHP7448_0315 MHP7448_0316     FALSE 0.138 149.000 0.000 NA   NA
 866887 866888 MHP7448_0316 MHP7448_0317     TRUE 0.792 11.000 0.000 NA   NA
 866888 866889 MHP7448_0317 MHP7448_0318     FALSE 0.141 622.000 0.000 NA   NA
 866889 866890 MHP7448_0318 MHP7448_0319     TRUE 0.721 20.000 0.000 NA   NA
 866890 866891 MHP7448_0319 MHP7448_0320     TRUE 0.792 11.000 0.000 NA   NA
 866891 866892 MHP7448_0320 MHP7448_0321     TRUE 0.395 50.000 0.000 NA   NA
 866895 866896 MHP7448_0324 MHP7448_0325     TRUE 0.721 20.000 0.000 NA   NA
 866896 866897 MHP7448_0325 MHP7448_0326     FALSE 0.141 624.000 0.000 NA   NA
 866897 866898 MHP7448_0326 MHP7448_0327     TRUE 0.669 24.000 0.000 NA   NA
 866899 866900 MHP7448_0328 MHP7448_0329     TRUE 0.875 2.000 0.000 NA   NA
 866900 866901 MHP7448_0329 MHP7448_0330     TRUE 0.878 88.000 1.000 NA   NA
 866902 866903 MHP7448_0331 MHP7448_0332     TRUE 0.638 26.000 0.000 NA   NA
 866903 866904 MHP7448_0332 MHP7448_0333     FALSE 0.129 286.000 0.000 NA   NA
 866905 866906 MHP7448_0334 MHP7448_0335     TRUE 0.934 69.000 0.500 NA   NA
 866909 866910 MHP7448_0338 MHP7448_0339     TRUE 0.806 8.000 0.000 NA   NA
 866910 866911 MHP7448_0339 MHP7448_0340     FALSE 0.150 1576.000 0.000 NA   NA
 866911 866912 MHP7448_0340 MHP7448_0341     TRUE 0.929 -13.000 0.000 NA   NA
 866912 866913 MHP7448_0341 MHP7448_0342     TRUE 0.520 36.000 0.000 NA   NA
 866916 866917 MHP7448_0345 MHP7448_0346     TRUE 0.710 21.000 0.000 NA   NA
 866917 866918 MHP7448_0346 MHP7448_0347     FALSE 0.129 224.000 0.000 NA   NA
 866919 866920 MHP7448_0699 MHP7448_0700     TRUE 0.795 10.000 0.000 NA   NA
 866920 866921 MHP7448_0700 MHP7448_0348     TRUE 0.252 69.000 0.000 NA   NA
 866921 866922 MHP7448_0348 MHP7448_0349     FALSE 0.148 996.000 0.000 NA   NA
 866922 866923 MHP7448_0349 MHP7448_0350     FALSE 0.137 163.000 0.000 NA   NA
 866923 866924 MHP7448_0350 MHP7448_0351     TRUE 0.989 3.000 0.016 NA   NA
 866925 866926 MHP7448_0352 MHP7448_0353     TRUE 0.991 16.000 0.778 NA   NA
 866926 866927 MHP7448_0353 MHP7448_0354   hit TRUE 0.974 32.000 0.111 NA   NA
 866928 866929 MHP7448_0355 MHP7448_0356     FALSE 0.165 111.000 0.000 NA   NA
 866931 866932 MHP7448_0358 MHP7448_0359 glpF glpK TRUE 0.990 14.000 0.125 1.000 N NA
 866933 866934 MHP7448_0360 MHP7448_0361     TRUE 0.997 -16.000 0.133 1.000   NA
 866934 866935 MHP7448_0361 MHP7448_0362     TRUE 0.970 -22.000 0.000 1.000 Y NA
 866935 866936 MHP7448_0362 MHP7448_0363     FALSE 0.167 110.000 0.000 NA   NA
 866936 866937 MHP7448_0363 MHP7448_0364     TRUE 0.905 18.000 0.002 NA   NA
 866937 866938 MHP7448_0364 MHP7448_0365     TRUE 0.992 12.000 0.163 NA   NA
 866938 866939 MHP7448_0365 MHP7448_0366     FALSE 0.131 327.000 0.000 NA   NA
 866939 866940 MHP7448_0366 MHP7448_0367     TRUE 0.932 57.000 1.000 NA   NA
 866940 866941 MHP7448_0367 MHP7448_0368     TRUE 0.978 27.000 0.091 NA   NA
 866941 866942 MHP7448_0368 MHP7448_0369     TRUE 0.991 14.000 0.200 1.000 N NA
 866942 866943 MHP7448_0369 MHP7448_0370     TRUE 0.992 9.000 0.611 0.033 N NA
 866943 866944 MHP7448_0370 MHP7448_0371     TRUE 0.999 -37.000 0.204 0.033 Y NA
 866945 866946 MHP7448_0372 MHP7448_0373     TRUE 0.783 13.000 0.000 NA   NA
 866946 866947 MHP7448_0373 MHP7448_0374   sgaA FALSE 0.079 184.000 0.000 1.000   NA
 866947 866948 MHP7448_0374 MHP7448_0375 sgaA   TRUE 0.990 25.000 0.279 0.019 Y NA
 866948 866949 MHP7448_0375 MHP7448_0376   sgaT TRUE 0.797 429.000 0.431 0.024   NA
 866949 866950 MHP7448_0376 MHP7448_0377 sgaT   TRUE 0.833 99.000 0.118 1.000   NA
 866950 866951 MHP7448_0377 MHP7448_0378     FALSE 0.133 186.000 0.000 NA   NA
 866952 866953 MHP7448_0379 MHP7448_0380     TRUE 0.932 -4.000 0.000 NA N NA
 866953 866954 MHP7448_0380 MHP7448_0381     TRUE 0.999 -4.000 0.400 NA Y NA
 866954 866955 MHP7448_0381 MHP7448_0382     TRUE 0.670 70.000 0.005 NA   NA
 866955 866956 MHP7448_0382 MHP7448_0383     FALSE 0.167 110.000 0.000 NA   NA
 866957 866958 MHP7448_0384 MHP7448_0385   proS TRUE 0.230 67.000 0.000 1.000 N NA
 866958 866959 MHP7448_0385 MHP7448_0701 proS   TRUE 0.425 45.000 0.000 NA   NA
 866959 866960 MHP7448_0701 MHP7448_0702     TRUE 0.823 5.000 0.000 NA   NA
 866961 866964 MHP7448_0386 MHP7448_0389     TRUE 0.217 80.000 0.000 NA   NA
 866966 866967 MHP7448_0391 MHP7448_0392     TRUE 0.997 2.000 0.635 NA   NA
 866967 866968 MHP7448_0392 MHP7448_0393   ftsZ TRUE 0.636 49.000 0.002 1.000 N NA
 866968 866969 MHP7448_0393 MHP7448_0394 ftsZ   FALSE 0.111 229.000 0.000 1.000 N NA
 866969 866970 MHP7448_0394 MHP7448_0395     TRUE 0.957 8.000 0.006 1.000   NA
 866970 866971 MHP7448_0395 MHP7448_0396   metS TRUE 0.989 -7.000 0.011 1.000   NA
 866972 866973 MHP7448_0397 MHP7448_0398   rnc FALSE 0.131 201.000 0.000 NA   NA
 866973 866974 MHP7448_0398 MHP7448_0399 rnc   TRUE 0.270 64.000 0.000 NA   NA
 866975 866976 MHP7448_0400 MHP7448_0401   asnS FALSE 0.084 637.000 0.000 1.000   NA
 866976 866977 MHP7448_0401 MHP7448_0402 asnS   TRUE 0.265 65.000 0.000 NA   NA
 866977 866978 MHP7448_0402 MHP7448_0403   pcrA TRUE 0.747 17.000 0.000 NA   NA
 866978 866979 MHP7448_0403 MHP7448_0404 pcrA   TRUE 0.978 2.000 0.005 NA   NA
 866979 866980 MHP7448_0404 MHP7448_0405   ruvA TRUE 0.425 104.000 0.002 NA   NA
 866980 866981 MHP7448_0405 MHP7448_0406 ruvA ruvB TRUE 0.998 -4.000 0.549 0.005 Y NA
 866982 866983 MHP7448_0407 MHP7448_0408     TRUE 0.903 96.000 0.333 NA   NA
 866983 866984 MHP7448_0408 MHP7448_0409     FALSE 0.150 124.000 0.000 NA   NA
 866984 866985 MHP7448_0409 MHP7448_0410     FALSE 0.149 126.000 0.000 NA   NA
 866985 866986 MHP7448_0410 MHP7448_0411     FALSE 0.132 355.000 0.000 NA   NA
 866986 866987 MHP7448_0411 MHP7448_0412     FALSE 0.142 668.000 0.000 NA   NA
 866987 866988 MHP7448_0412 MHP7448_0413     TRUE 0.856 3.000 0.000 NA   NA
 866988 866989 MHP7448_0413 MHP7448_0414     FALSE 0.132 375.000 0.000 NA   NA
 866989 866990 MHP7448_0414 MHP7448_0415     TRUE 0.873 90.000 1.000 NA   NA
 866990 866991 MHP7448_0415 MHP7448_0416   trsE TRUE 0.997 -7.000 1.000 NA   NA
 866991 866992 MHP7448_0416 MHP7448_0417 trsE   TRUE 0.816 514.000 1.000 NA   NA
 866992 866993 MHP7448_0417 MHP7448_0418     FALSE 0.139 570.000 0.000 NA   NA
 866993 866994 MHP7448_0418 MHP7448_0419     FALSE 0.140 581.000 0.000 NA   NA
 866994 866995 MHP7448_0419 MHP7448_0420     FALSE 0.163 112.000 0.000 NA   NA
 866995 866996 MHP7448_0420 MHP7448_0421     TRUE 0.840 4.000 0.000 NA   NA
 866996 866997 MHP7448_0421 MHP7448_0422     TRUE 0.767 15.000 0.000 NA   NA
 866997 866998 MHP7448_0422 MHP7448_0423     FALSE 0.132 355.000 0.000 NA   NA
 866998 866999 MHP7448_0423 MHP7448_0424     TRUE 0.991 14.000 0.133 NA   NA
 866999 867000 MHP7448_0424 MHP7448_0425     FALSE 0.129 264.000 0.000 NA   NA
 867000 867001 MHP7448_0425 MHP7448_0426     TRUE 0.806 8.000 0.000 NA   NA
 867002 867003 MHP7448_0427 MHP7448_0428 efp tkt TRUE 0.636 39.000 0.002 1.000 N NA
 867003 867004 MHP7448_0428 MHP7448_0429 tkt   FALSE 0.082 158.000 0.000 1.000   NA
 867004 867005 MHP7448_0429 MHP7448_0430   trmU TRUE 0.965 0.000 0.003 1.000   NA
 867006 867007 MHP7448_0431 MHP7448_0432     FALSE 0.133 394.000 0.000 NA   NA
 867007 867008 MHP7448_0432 MHP7448_0433     FALSE 0.130 203.000 0.000 NA   NA
 867008 867009 MHP7448_0433 MHP7448_0434     TRUE 0.882 123.000 0.500 NA   NA
 867009 867010 MHP7448_0434 MHP7448_0435     TRUE 0.997 2.000 0.400 NA   NA
 867010 867011 MHP7448_0435 MHP7448_0436   sgaE TRUE 0.966 38.000 0.286 1.000   NA
 867011 867012 MHP7448_0436 MHP7448_0437 sgaE sgaU TRUE 0.999 -10.000 0.750 1.000 Y NA
 867012 867013 MHP7448_0437 MHP7448_0438 sgaU sgaH TRUE 0.999 -19.000 0.750 1.000 Y NA
 867013 867014 MHP7448_0438 MHP7448_0439 sgaH   FALSE 0.130 313.000 0.000 NA   NA
 867014 867015 MHP7448_0439 MHP7448_0440     FALSE 0.131 194.000 0.000 NA   NA
 867016 867017 MHP7448_0441 MHP7448_0442     TRUE 0.297 60.000 0.000 NA   NA
 867018 867019 MHP7448_0443 MHP7448_0444     FALSE 0.133 401.000 0.000 NA   NA
 867019 867020 MHP7448_0444 MHP7448_0445     FALSE 0.152 6326.000 0.000 NA   NA
 867021 867022 MHP7448_0446 MHP7448_0447     FALSE 0.151 2522.000 0.000 NA   NA
 867022 867023 MHP7448_0447 MHP7448_0448     FALSE 0.139 577.000 0.000 NA   NA
 867024 867025 MHP7448_0449 MHP7448_0450     FALSE 0.133 184.000 0.000 NA   NA
 867025 867026 MHP7448_0450 MHP7448_0703     FALSE 0.143 134.000 0.000 NA   NA
 867026 867027 MHP7448_0703 MHP7448_0451   metK FALSE 0.189 95.000 0.000 NA   NA
 867027 867028 MHP7448_0451 MHP7448_0452 metK   FALSE 0.168 91.000 0.000 1.000 N NA
 867028 867029 MHP7448_0452 MHP7448_0453     TRUE 0.847 121.000 0.333 1.000   NA
 867030 867031 MHP7448_0454 MHP7448_0455 acpD acpD-1 TRUE 0.995 14.000 0.667 0.005 Y NA
 867031 867032 MHP7448_0455 MHP7448_0456 acpD-1 rpmE TRUE 0.661 59.000 0.004 1.000 N NA
 867032 867033 MHP7448_0456 MHP7448_0457 rpmE napA TRUE 0.915 21.000 0.004 1.000 N NA
 867033 867034 MHP7448_0457 MHP7448_0458 napA rluD TRUE 0.814 23.000 0.002 1.000 N NA
 867035 867036 MHP7448_0459 MHP7448_0460 rplA rplK TRUE 0.997 2.000 0.838 0.084 Y NA
 867036 867037 MHP7448_0460 MHP7448_0704 rplK   FALSE 0.129 222.000 0.000 NA   NA
 867037 867038 MHP7448_0704 MHP7448_0705     TRUE 0.814 6.000 0.000 NA   NA
 867039 867040 MHP7448_0461 MHP7448_0462     TRUE 0.669 24.000 0.000 NA   NA
 867040 867041 MHP7448_0462 MHP7448_0463     FALSE 0.132 357.000 0.000 NA   NA
 867042 867043 MHP7448_0464 MHP7448_0465 pepA   TRUE 0.473 162.000 0.007 1.000   NA
 867043 867044 MHP7448_0465 MHP7448_0466     TRUE 0.940 24.000 0.007 NA   NA
 867044 867045 MHP7448_0466 MHP7448_0467     TRUE 0.880 126.000 0.500 NA   NA
 867045 867046 MHP7448_0467 MHP7448_0468     TRUE 0.995 5.000 0.500 NA   NA
 867046 867047 MHP7448_0468 MHP7448_0469     TRUE 0.997 -3.000 0.250 NA   NA
 867047 867048 MHP7448_0469 MHP7448_0470     TRUE 0.972 39.000 0.250 NA   NA
 867049 867050 MHP7448_0471 MHP7448_0472   ptsI FALSE 0.203 75.000 0.000 1.000 N NA
 867050 867051 MHP7448_0472 MHP7448_0473 ptsI nadE FALSE 0.116 174.000 0.000 1.000 N NA
 867051 867052 MHP7448_0473 MHP7448_0474 nadE   TRUE 0.992 0.000 0.015 NA   NA
 867053 867054 MHP7448_0475 MHP7448_0476 pfs nadD TRUE 0.975 8.000 0.010 1.000 N NA
 867054 867055 MHP7448_0476 MHP7448_0477 nadD   TRUE 0.933 4.000 0.002 1.000   NA
 867055 867056 MHP7448_0477 MHP7448_0478   atpD FALSE 0.138 559.000 0.000 NA   NA
 867056 867057 MHP7448_0478 MHP7448_0479 atpD atpA TRUE 0.856 3.000 0.000 NA   NA
 867057 867058 MHP7448_0479 MHP7448_0480 atpA   TRUE 0.997 0.000 0.500 NA   NA
 867058 867059 MHP7448_0480 MHP7448_0481     TRUE 0.890 77.000 1.000 NA   NA
 867059 867060 MHP7448_0481 MHP7448_0482     TRUE 0.956 1.000 0.002 NA   NA
 867060 867061 MHP7448_0482 MHP7448_0483     TRUE 0.895 16.000 0.002 NA   NA
 867061 867062 MHP7448_0483 MHP7448_0484     TRUE 0.990 13.000 1.000 NA   NA
 867064 867065 MHP7448_0486 MHP7448_0487   mgtE TRUE 0.897 102.000 0.333 NA   NA
 867065 867066 MHP7448_0487 MHP7448_0488 mgtE   TRUE 0.992 16.000 0.600 NA   NA
 867066 867067 MHP7448_0488 MHP7448_0489     FALSE 0.129 232.000 0.000 NA   NA
 867068 867069 MHP7448_0490 MHP7448_0491 pgk   FALSE 0.134 176.000 0.000 NA   NA
 867069 867070 MHP7448_0491 MHP7448_0492   fruA FALSE 0.163 112.000 0.000 NA   NA
 867070 867071 MHP7448_0492 MHP7448_0493 fruA   TRUE 0.856 3.000 0.000 NA   NA
 867071 867072 MHP7448_0493 MHP7448_0494     TRUE 0.788 12.000 0.000 NA   NA
 867073 867074 MHP7448_0495 MHP7448_0496     FALSE 0.136 471.000 0.000 NA   NA
 867074 867075 MHP7448_0496 MHP7448_0497     FALSE 0.147 127.000 0.000 NA   NA
 867075 867076 MHP7448_0497 MHP7448_0498     FALSE 0.129 290.000 0.000 NA   NA
 867076 867077 MHP7448_0498 MHP7448_0499     TRUE 0.971 38.000 0.182 NA   NA
 867077 867078 MHP7448_0499 MHP7448_0500     TRUE 0.906 2.000 0.000 NA N NA
 867078 867079 MHP7448_0500 MHP7448_0501   oppF FALSE 0.112 205.000 0.000 1.000 N NA
 867079 867080 MHP7448_0501 MHP7448_0502 oppF oppD-1 TRUE 0.940 -3.000 0.000 0.006 Y NA
 867080 867081 MHP7448_0502 MHP7448_0503 oppD-1 oppC TRUE 0.996 0.000 0.250 1.000   NA
 867081 867082 MHP7448_0503 MHP7448_0504 oppC oppB TRUE 0.996 -7.000 0.222 0.030   NA
 867082 867083 MHP7448_0504 MHP7448_0505 oppB   TRUE 0.994 6.000 0.222 NA   NA
 867084 867085 MHP7448_0506 MHP7448_0507 pdhC pdhD TRUE 0.998 0.000 0.214 1.000 Y NA
 867086 867087 MHP7448_0508 MHP7448_0509 ackA pta TRUE 0.998 0.000 0.111 1.000 Y NA
 867087 867088 MHP7448_0509 MHP7448_0510 pta   FALSE 0.158 119.000 0.000 NA   NA
 867088 867089 MHP7448_0510 MHP7448_0511     TRUE 0.823 5.000 0.000 NA   NA
 867089 867090 MHP7448_0511 MHP7448_0512     FALSE 0.148 942.000 0.000 NA   NA
 867091 867092 MHP7448_0513 MHP7448_0514   xylG TRUE 0.942 121.000 0.667 NA Y NA
 867092 867093 MHP7448_0514 MHP7448_0515 xylG xylH TRUE 0.998 0.000 0.667 1.000 Y NA
 867093 867094 MHP7448_0515 MHP7448_0516 xylH   TRUE 0.823 5.000 0.000 NA   NA
 867094 867095 MHP7448_0516 MHP7448_0517   glck TRUE 0.792 11.000 0.000 NA   NA
 867096 867097 MHP7448_0518 MHP7448_0519     FALSE 0.129 243.000 0.000 NA   NA
 867097 867098 MHP7448_0519 MHP7448_0520     TRUE 0.563 32.000 0.000 NA   NA
 867098 867099 MHP7448_0520 MHP7448_0521   pepF FALSE 0.150 1094.000 0.000 NA   NA
 867101 867102 MHP7448_0523 MHP7448_0524 tufA lon FALSE 0.111 299.000 0.000 1.000 N NA
 867102 867103 MHP7448_0524 MHP7448_0525 lon   TRUE 0.811 165.000 0.097 NA   NA
 867103 867104 MHP7448_0525 MHP7448_0526   upp TRUE 0.977 3.000 0.006 NA   NA
 867104 867105 MHP7448_0526 MHP7448_0527 upp deoC TRUE 0.794 93.000 0.010 1.000 Y NA
 867107 867108 MHP7448_0529 MHP7448_0530 pmsR   TRUE 0.232 75.000 0.000 NA   NA
 867108 867109 MHP7448_0530 MHP7448_0531   pgiB TRUE 0.331 57.000 0.000 NA   NA
 867109 867110 MHP7448_0531 MHP7448_0532 pgiB polC FALSE 0.121 139.000 0.000 1.000 N NA
 867110 867111 MHP7448_0532 MHP7448_0533 polC   TRUE 0.921 34.000 0.011 1.000 N NA
 867111 867112 MHP7448_0533 MHP7448_0534   frr TRUE 0.991 2.000 0.020 1.000 N NA
 867112 867113 MHP7448_0534 MHP7448_0535 frr pyrH TRUE 0.969 40.000 0.626 1.000 N NA
 867114 867115 MHP7448_0536 MHP7448_0537     TRUE 0.520 36.000 0.000 NA   NA
 867116 867117 MHP7448_0538 MHP7448_0539     TRUE 0.710 21.000 0.000 NA   NA
 867117 867118 MHP7448_0539 MHP7448_0540   potC TRUE 0.946 30.000 0.013 NA   NA
 867118 867119 MHP7448_0540 MHP7448_0541 potC potB TRUE 0.998 -7.000 0.492 0.029 Y NA
 867119 867120 MHP7448_0541 MHP7448_0542 potB potA TRUE 0.976 38.000 0.928 0.029 Y NA
 867121 867122 MHP7448_0543 MHP7448_0544     TRUE 0.814 6.000 0.000 NA   NA
 867125 867126 MHP7448_0547 MHP7448_0548   mtlF FALSE 0.134 417.000 0.000 NA   NA
 867126 867127 MHP7448_0548 MHP7448_0549 mtlF mtlD TRUE 0.997 -9.000 0.019 1.000 Y NA
 867127 867128 MHP7448_0549 MHP7448_0550 mtlD mtlA TRUE 0.997 -9.000 0.025 1.000 Y NA
 867130 867131 MHP7448_0552 MHP7448_0553     TRUE 0.987 16.000 0.500 0.017   NA
 867131 867132 MHP7448_0553 MHP7448_0554     TRUE 0.999 -10.000 0.667 0.017 Y NA
 867132 867133 MHP7448_0554 MHP7448_0555     FALSE 0.131 341.000 0.000 NA   NA
 867133 867134 MHP7448_0555 MHP7448_0556     TRUE 0.992 5.000 1.000 NA   NA
 867134 867135 MHP7448_0556 MHP7448_0557     TRUE 0.851 214.000 0.250 NA   NA
 867135 867136 MHP7448_0557 MHP7448_0558     FALSE 0.082 516.000 0.000 1.000   NA
 867136 867137 MHP7448_0558 MHP7448_0559     TRUE 0.680 11.000 0.000 1.000   NA
 867137 867138 MHP7448_0559 MHP7448_0560     FALSE 0.147 844.000 0.000 NA   NA
 867138 867139 MHP7448_0560 MHP7448_0561     TRUE 0.284 62.000 0.000 NA   NA
 867139 867140 MHP7448_0561 MHP7448_0562     FALSE 0.144 723.000 0.000 NA   NA
 867140 867141 MHP7448_0562 MHP7448_0563     FALSE 0.143 707.000 0.000 NA   NA
 867141 867142 MHP7448_0563 MHP7448_0564     TRUE 0.284 62.000 0.000 NA   NA
 867142 867143 MHP7448_0564 MHP7448_0565     FALSE 0.144 723.000 0.000 NA   NA
 867143 867144 MHP7448_0565 MHP7448_0566     FALSE 0.146 762.000 0.000 NA   NA
 867144 867145 MHP7448_0566 MHP7448_0567     TRUE 0.284 62.000 0.000 NA   NA
 867145 867146 MHP7448_0567 MHP7448_0568     FALSE 0.144 723.000 0.000 NA   NA
 867147 867148 MHP7448_0569 MHP7448_0570     FALSE 0.129 261.000 0.000 NA   NA
 867151 867152 MHP7448_0573 MHP7448_0574 fba-1   TRUE 0.996 9.000 0.286 1.000 Y NA
 867152 867153 MHP7448_0574 MHP7448_0575   nagB TRUE 0.941 97.000 0.364 1.000 Y NA
 867154 867155 MHP7448_0576 MHP7448_0577 rpsD rpiB FALSE 0.139 114.000 0.000 1.000 N NA
 867155 867156 MHP7448_0577 MHP7448_0578 rpiB fpg TRUE 0.970 0.000 0.003 1.000 N NA
 867157 867158 MHP7448_0579 MHP7448_0580   mnuA TRUE 0.620 27.000 0.000 NA   NA
 867158 867159 MHP7448_0580 MHP7448_0581 mnuA   TRUE 0.699 22.000 0.000 NA   NA
 867159 867160 MHP7448_0581 MHP7448_0582   dnaE TRUE 0.996 3.000 0.119 0.012 Y NA
 867160 867161 MHP7448_0582 MHP7448_0583 dnaE rbfA TRUE 0.597 26.000 0.000 1.000 N NA
 867161 867162 MHP7448_0583 MHP7448_0584 rbfA infB TRUE 0.996 12.000 0.530 1.000 Y NA
 867162 867163 MHP7448_0584 MHP7448_0585 infB   TRUE 0.998 -33.000 0.171 NA N NA
 867163 867164 MHP7448_0585 MHP7448_0586   nusA TRUE 0.997 10.000 0.323 NA Y NA
 867166 867167 MHP7448_0588 MHP7448_0589 glpD thrS FALSE 0.081 491.000 0.000 1.000   NA
 867167 867168 MHP7448_0589 MHP7448_0590 thrS trpS TRUE 0.990 4.000 0.014 0.057 Y NA
 867169 867170 MHP7448_0591 MHP7448_0592     TRUE 0.992 13.000 0.304 1.000 N NA
 867170 867171 MHP7448_0592 MHP7448_0593   rnhB TRUE 0.996 -10.000 0.011 1.000 Y NA
 867171 867172 MHP7448_0593 MHP7448_0594 rnhB   TRUE 0.916 38.000 0.011 NA   NA
 867172 867173 MHP7448_0594 MHP7448_0595   pgm TRUE 0.947 8.000 0.003 NA   NA
 867173 867174 MHP7448_0595 MHP7448_0596 pgm   FALSE 0.137 163.000 0.000 NA   NA
 867174 867175 MHP7448_0596 MHP7448_0597     TRUE 0.347 56.000 0.000 NA   NA
 867175 867176 MHP7448_0597 MHP7448_0598     FALSE 0.131 320.000 0.000 NA   NA
 867176 867177 MHP7448_0598 MHP7448_0599     FALSE 0.135 168.000 0.000 NA   NA
 867177 867178 MHP7448_0599 MHP7448_0600     TRUE 0.371 53.000 0.000 NA   NA
 867178 867179 MHP7448_0600 MHP7448_0706     FALSE 0.135 166.000 0.000 NA   NA
 867179 867180 MHP7448_0706 MHP7448_0601     TRUE 0.767 15.000 0.000 NA   NA
 867180 867181 MHP7448_0601 MHP7448_0602     TRUE 0.982 5.000 0.012 NA   NA
 867181 867182 MHP7448_0602 MHP7448_0603   ppa TRUE 0.930 51.000 0.035 NA   NA
 867182 867183 MHP7448_0603 MHP7448_0604 ppa xylF FALSE 0.076 266.000 0.000 1.000   NA
 867183 867184 MHP7448_0604 MHP7448_0605 xylF   TRUE 0.731 165.000 0.048 1.000   NA
 867184 867185 MHP7448_0605 MHP7448_0606     TRUE 0.995 3.000 0.438 1.000   NA
 867185 867186 MHP7448_0606 MHP7448_0607     TRUE 0.990 6.000 0.720 0.028   NA
 867186 867187 MHP7448_0607 MHP7448_0608   tdk TRUE 0.633 59.000 0.004 1.000   NA
 867187 867188 MHP7448_0608 MHP7448_0707 tdk   TRUE 0.252 69.000 0.000 NA   NA
 867188 867189 MHP7448_0707 MHP7448_0609   ptsH FALSE 0.184 97.000 0.000 NA   NA
 867189 867190 MHP7448_0609 MHP7448_0610 ptsH   FALSE 0.204 199.000 0.000 0.018 Y NA
 867191 867192 MHP7448_0611 MHP7448_0612     FALSE 0.176 102.000 0.000 NA   NA
 867192 867193 MHP7448_0612 MHP7448_0613     FALSE 0.129 268.000 0.000 NA   NA
 867193 867194 MHP7448_0613 MHP7448_0614   ddem TRUE 0.823 5.000 0.000 NA   NA
 867194 867195 MHP7448_0614 MHP7448_0615 ddem   FALSE 0.144 131.000 0.000 NA   NA
 867195 867196 MHP7448_0615 MHP7448_0616   rpoC TRUE 0.921 7.000 0.002 NA   NA
 867196 867197 MHP7448_0616 MHP7448_0617 rpoC rpoB TRUE 0.901 57.000 0.851 0.004   NA
 867197 867198 MHP7448_0617 MHP7448_0618 rpoB rplL TRUE 0.836 207.000 0.223 1.000 N NA
 867198 867199 MHP7448_0618 MHP7448_0619 rplL rplJ TRUE 0.995 12.000 0.884 1.000 Y NA
 867200 867201 MHP7448_0620 MHP7448_0621     TRUE 0.284 62.000 0.000 NA   NA
 867203 867204 MHP7448_0623 MHP7448_0624     TRUE 0.296 41.000 0.000 0.016 N NA
 867204 867205 MHP7448_0624 MHP7448_0625     FALSE 0.133 179.000 0.000 NA   NA
 867207 867208 MHP7448_0627 MHP7448_0628     TRUE 0.995 9.000 0.667 0.016 Y NA
 867209 867210 MHP7448_0629 MHP7448_0630     FALSE 0.181 62.000 0.000 1.000   NA
 867211 867212 MHP7448_0631 MHP7448_0632 plsC   TRUE 0.960 30.000 0.019 NA   NA
 867212 867213 MHP7448_0632 MHP7448_0633     TRUE 0.997 2.000 0.570 NA   NA
 867213 867214 MHP7448_0633 MHP7448_0634     TRUE 0.681 58.000 0.003 NA   NA
 867217 867218 MHP7448_0636 MHP7448_0637   nusG FALSE 0.112 208.000 0.000 1.000 N NA
 867218 867219 MHP7448_0637 MHP7448_0638 nusG rpmG-1 FALSE 0.076 257.000 0.000 1.000   NA
 867219 867220 MHP7448_0638 MHP7448_0639 rpmG-1   TRUE 0.262 51.000 0.000 1.000   NA
 867220 867221 MHP7448_0639 MHP7448_0640     TRUE 0.675 12.000 0.000 1.000   NA
 867221 867222 MHP7448_0640 MHP7448_0641   cysS TRUE 0.947 34.000 0.009 1.000 Y NA
 867222 867223 MHP7448_0641 MHP7448_0642 cysS   TRUE 0.848 -4.000 0.000 1.000   NA
 867223 867224 MHP7448_0642 MHP7448_0643     TRUE 0.987 5.000 0.043 1.000   NA
 867224 867225 MHP7448_0643 MHP7448_0644   dnaB TRUE 0.992 0.000 0.024 1.000   NA
 867225 867226 MHP7448_0644 MHP7448_0645 dnaB rplI TRUE 0.996 -7.000 0.100 1.000 N NA
 867226 867227 MHP7448_0645 MHP7448_0646 rplI   TRUE 0.997 -19.000 0.119 1.000 N NA
 867227 867228 MHP7448_0646 MHP7448_0647   leuS TRUE 0.910 4.000 0.002 1.000 N NA
 867229 867230 MHP7448_0648 MHP7448_0649 uvrB   TRUE 0.882 22.000 0.002 NA N NA
 867231 867232 MHP7448_0709 MHP7448_0650   rpsI TRUE 0.239 71.000 0.000 NA   NA
 867232 867233 MHP7448_0650 MHP7448_0651 rpsI rplM TRUE 0.997 4.000 0.601 0.055 Y NA
 867233 867234 MHP7448_0651 MHP7448_0652 rplM ksgA TRUE 0.396 142.000 0.002 1.000 Y NA
 867234 867235 MHP7448_0652 MHP7448_0653 ksgA   TRUE 0.851 8.000 0.000 NA N NA
 867236 867237 MHP7448_0654 MHP7448_0655 prsA gidB TRUE 0.947 23.000 0.009 1.000 N NA
 867237 867238 MHP7448_0655 MHP7448_0656 gidB   FALSE 0.085 134.000 0.000 1.000   NA
 867238 867239 MHP7448_0656 MHP7448_0657     FALSE 0.078 199.000 0.000 1.000   NA
 867239 867240 MHP7448_0657 MHP7448_0658   rpmG FALSE 0.131 122.000 0.000 1.000 N NA
 867240 867241 MHP7448_0658 MHP7448_0659 rpmG pepP TRUE 0.988 2.000 0.014 1.000 N NA
 867241 867242 MHP7448_0659 MHP7448_0660 pepP   TRUE 0.520 36.000 0.000 NA   NA
 867242 867243 MHP7448_0660 MHP7448_0661     TRUE 0.359 55.000 0.000 NA   NA
 867244 867245 MHP7448_0662 MHP7448_0663     FALSE 0.143 134.000 0.000 NA   NA
 867246 867247 MHP7448_0664 MHP7448_0665     TRUE 0.999 -12.000 0.667 0.016 Y NA
 867248 867249 MHP7448_0710 MHP7448_0711     FALSE 0.137 484.000 0.000 NA   NA
 867250 867251 MHP7448_0666 MHP7448_0667     FALSE 0.129 296.000 0.000 NA   NA
 867251 867252 MHP7448_0667 MHP7448_0668   greA TRUE 0.447 41.000 0.000 NA   NA
 867252 867253 MHP7448_0668 MHP7448_0669 greA   TRUE 0.859 69.000 0.031 1.000 N NA
 867253 867254 MHP7448_0669 MHP7448_0670     TRUE 0.215 81.000 0.000 NA   NA
 867254 867255 MHP7448_0670 MHP7448_0671     TRUE 0.783 13.000 0.000 NA   NA
 867255 867256 MHP7448_0671 MHP7448_0672   valS TRUE 0.928 11.000 0.002 NA   NA
 867257 867258 MHP7448_0673 MHP7448_0674     FALSE 0.132 189.000 0.000 NA   NA
 867258 867259 MHP7448_0674 MHP7448_0675     TRUE 0.347 56.000 0.000 NA   NA
 867259 867260 MHP7448_0675 MHP7448_0676     FALSE 0.135 79.000 0.000 1.000   NA
 867260 867261 MHP7448_0676 MHP7448_0677   rnpA TRUE 0.995 -10.000 0.021 1.000 N NA
 867261 867262 MHP7448_0677 MHP7448_0678 rnpA rpmH TRUE 0.987 18.000 0.787 1.000   NA