MicrobesOnline Operon Predictions for Streptococcus pyogenes MGAS315

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column	Description
Gene1	VIMSS id of 1st gene in pair
SysName1	Systematic name of 1st gene in pair
Name1	Ordinary name of 1st gene in pair
Gene2	VIMSS id of 2nd gene in pair
SysName2	Systematic name of 2nd gene in pair
Name2	Ordinary name of 2nd gene in pair
bOp	Whether the pair is predicted to lie in the same operon or not
pOp	Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep	Distance between the two genes, in base pairs
MOGScore	Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore	Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim	Whether the genes share a COG category or not
ExprSim	Correlation of expression patterns (not available for most genomes)

Gene1	Gene2	SysName1	SysName2	Name1	Name2	bOp	pOp	Sep	MOGScore	GOScore	COGSim	ExprSim
268703	268704	SpyM3_0001	SpyM3_0002	dnaA	dnaN	TRUE	0.591	155.000	0.328	1.000	Y	NA
268704	268705	SpyM3_0002	SpyM3_0003	dnaN		TRUE	0.519	75.000	0.009	NA		NA
268705	268706	SpyM3_0003	SpyM3_0004			FALSE	0.074	330.000	0.064	NA		NA
268706	268707	SpyM3_0004	SpyM3_0005		pth	TRUE	0.854	70.000	0.184	1.000	Y	NA
268707	268708	SpyM3_0005	SpyM3_0006	pth	trcF	TRUE	0.452	87.000	0.137	1.000	N	NA
268708	268709	SpyM3_0006	SpyM3_0007	trcF		FALSE	0.094	162.000	0.024	1.000	N	NA
268709	268710	SpyM3_0007	SpyM3_0008		divIC	TRUE	0.904	-13.000	0.053	1.000	N	NA
268710	268711	SpyM3_0008	SpyM3_0009	divIC		FALSE	0.097	135.000	0.011	1.000	N	NA
268711	268712	SpyM3_0009	SpyM3_0010		mesJ	FALSE	0.217	96.000	0.014	1.000	N	NA
268712	268713	SpyM3_0010	SpyM3_0011	mesJ	hpt	TRUE	0.951	5.000	0.067	0.064	N	NA
268713	268714	SpyM3_0011	SpyM3_0012	hpt	ftsH	TRUE	0.864	22.000	0.192	1.000	N	NA
268714	268715	SpyM3_0012	SpyM3_0013	ftsH		FALSE	0.024	326.000	0.009	1.000	N	NA
268715	2179433	SpyM3_0013	SpyM3_r01			FALSE	0.022	565.000	0.000	NA		NA
2179433	400209	SpyM3_r01	SpyM3_t01		tRNA-Ala	TRUE	0.656	45.000	0.000	NA		NA
400209	2179434	SpyM3_t01	SpyM3_r02	tRNA-Ala		FALSE	0.050	296.000	0.000	NA		NA
2179434	2179435	SpyM3_r02	SpyM3_r13			FALSE	0.388	82.000	0.000	NA		NA
2179435	400210	SpyM3_r13	SpyM3_t02		tRNA-Val	TRUE	0.778	18.000	0.000	NA		NA
400210	400211	SpyM3_t02	SpyM3_t03	tRNA-Val	tRNA-Asp	TRUE	0.778	18.000	0.000	NA		NA
400211	400212	SpyM3_t03	SpyM3_t04	tRNA-Asp	tRNA-Lys	TRUE	0.713	32.000	0.000	NA		NA
400212	400213	SpyM3_t04	SpyM3_t05	tRNA-Lys	tRNA-Leu	TRUE	0.839	6.000	0.000	NA		NA
400213	400214	SpyM3_t05	SpyM3_t06	tRNA-Leu	tRNA-Thr	TRUE	0.816	11.000	0.000	NA		NA
400214	400215	SpyM3_t06	SpyM3_t07	tRNA-Thr	tRNA-Gly	TRUE	0.801	13.000	0.000	NA		NA
400215	400216	SpyM3_t07	SpyM3_t08	tRNA-Gly	tRNA-Leu	TRUE	0.833	9.000	0.000	NA		NA
400216	400217	SpyM3_t08	SpyM3_t09	tRNA-Leu	tRNA-Arg	TRUE	0.780	17.000	0.000	NA		NA
400217	400218	SpyM3_t09	SpyM3_t10	tRNA-Arg	tRNA-Pro	TRUE	0.847	4.000	0.000	NA		NA
400218	2179436	SpyM3_t10	SpyM3_r03	tRNA-Pro		FALSE	0.175	127.000	0.000	NA		NA
2179436	400219	SpyM3_r03	SpyM3_t11		tRNA-Ala	TRUE	0.656	45.000	0.000	NA		NA
400219	2179437	SpyM3_t11	SpyM3_r04	tRNA-Ala		FALSE	0.050	296.000	0.000	NA		NA
2179437	2179438	SpyM3_r04	SpyM3_r14			FALSE	0.388	82.000	0.000	NA		NA
2179438	400220	SpyM3_r14	SpyM3_t12		tRNA-Val	TRUE	0.778	18.000	0.000	NA		NA
400220	400221	SpyM3_t12	SpyM3_t13	tRNA-Val	tRNA-Asp	TRUE	0.778	18.000	0.000	NA		NA
400221	400222	SpyM3_t13	SpyM3_t14	tRNA-Asp	tRNA-Lys	TRUE	0.713	32.000	0.000	NA		NA
400222	400223	SpyM3_t14	SpyM3_t15	tRNA-Lys	tRNA-Leu	TRUE	0.839	6.000	0.000	NA		NA
400223	400224	SpyM3_t15	SpyM3_t16	tRNA-Leu	tRNA-Thr	TRUE	0.816	11.000	0.000	NA		NA
400224	400225	SpyM3_t16	SpyM3_t17	tRNA-Thr	tRNA-Gly	TRUE	0.801	13.000	0.000	NA		NA
400225	400226	SpyM3_t17	SpyM3_t18	tRNA-Gly	tRNA-Leu	TRUE	0.833	9.000	0.000	NA		NA
400226	400227	SpyM3_t18	SpyM3_t19	tRNA-Leu	tRNA-Arg	TRUE	0.780	17.000	0.000	NA		NA
400227	400228	SpyM3_t19	SpyM3_t20	tRNA-Arg	tRNA-Pro	TRUE	0.847	4.000	0.000	NA		NA
400228	400229	SpyM3_t20	SpyM3_t21	tRNA-Pro	tRNA-Met	TRUE	0.839	6.000	0.000	NA		NA
400229	400230	SpyM3_t21	SpyM3_t22	tRNA-Met	tRNA-Met	TRUE	0.765	21.000	0.000	NA		NA
400230	400231	SpyM3_t22	SpyM3_t23	tRNA-Met	tRNA-Ser	TRUE	0.754	23.000	0.000	NA		NA
400231	400232	SpyM3_t23	SpyM3_t24	tRNA-Ser	tRNA-Met	TRUE	0.825	10.000	0.000	NA		NA
400232	400233	SpyM3_t24	SpyM3_t25	tRNA-Met	tRNA-Phe	TRUE	0.765	21.000	0.000	NA		NA
400233	400234	SpyM3_t25	SpyM3_t26	tRNA-Phe	tRNA-Gly	TRUE	0.801	13.000	0.000	NA		NA
400234	400235	SpyM3_t26	SpyM3_t27	tRNA-Gly	tRNA-Ile	TRUE	0.697	35.000	0.000	NA		NA
400235	400236	SpyM3_t27	SpyM3_t28	tRNA-Ile	tRNA-Ser	TRUE	0.825	10.000	0.000	NA		NA
400236	268716	SpyM3_t28	SpyM3_0014	tRNA-Ser		FALSE	0.018	1503.000	0.000	NA		NA
268716	268717	SpyM3_0014	SpyM3_0015		prsA	FALSE	0.138	253.000	0.107	NA		NA
268717	268718	SpyM3_0015	SpyM3_0016	prsA	recO	FALSE	0.045	186.000	0.000	1.000	N	NA
268718	268719	SpyM3_0016	SpyM3_0017	recO	plsX	FALSE	0.177	103.000	0.011	1.000	N	NA
268719	268720	SpyM3_0017	SpyM3_0018	plsX	acpP.1	TRUE	0.992	-7.000	0.017	0.009	Y	NA
268720	268721	SpyM3_0018	SpyM3_0019	acpP.1	purC	FALSE	0.095	152.000	0.017	1.000	N	NA
268721	268722	SpyM3_0019	SpyM3_0020	purC	purL	FALSE	0.272	194.000	0.043	1.000	Y	NA
268722	268723	SpyM3_0020	SpyM3_0021	purL	purF	FALSE	0.193	234.000	0.024	1.000	Y	NA
268723	268724	SpyM3_0021	SpyM3_0022	purF	purM	TRUE	0.953	28.000	0.248	1.000	Y	NA
268724	268725	SpyM3_0022	SpyM3_0023	purM	purN	TRUE	0.818	168.000	0.238	0.003	Y	NA
268725	268726	SpyM3_0023	SpyM3_0024	purN	purH	TRUE	0.470	184.000	0.225	1.000	Y	NA
268728	268729	SpyM3_0026	SpyM3_0027	purD	purE	FALSE	0.326	158.000	0.044	1.000	Y	NA
268729	268730	SpyM3_0027	SpyM3_0028	purE	purK	TRUE	0.964	41.000	0.002	0.002	Y	NA
268730	268731	SpyM3_0028	SpyM3_0029	purK		TRUE	0.765	21.000	0.000	NA		NA
268731	268732	SpyM3_0029	SpyM3_0030		purB	FALSE	0.033	369.000	0.000	NA		NA
268732	268733	SpyM3_0030	SpyM3_0031	purB		FALSE	0.151	131.000	0.005	1.000		NA
268733	268734	SpyM3_0031	SpyM3_0032		ruvB	FALSE	0.072	220.000	0.002	1.000		NA
268734	268735	SpyM3_0032	SpyM3_0033	ruvB		FALSE	0.084	138.000	0.005	1.000	N	NA
268735	268736	SpyM3_0033	SpyM3_0034			TRUE	0.817	23.000	0.019	NA		NA
268736	268737	SpyM3_0034	SpyM3_0035			TRUE	0.982	-3.000	0.351	NA		NA
268737	268738	SpyM3_0035	SpyM3_0036		adh2	FALSE	0.018	309.000	0.000	1.000	N	NA
268738	268739	SpyM3_0036	SpyM3_0037	adh2	adh1	FALSE	0.346	253.000	0.012	0.002		NA
268739	268740	SpyM3_0037	SpyM3_0038	adh1		FALSE	0.023	388.000	0.000	1.000		NA
268740	268741	SpyM3_0038	SpyM3_0039		rpsJ	FALSE	0.040	199.000	0.000	1.000	N	NA
268741	268742	SpyM3_0039	SpyM3_0040	rpsJ	rplC	TRUE	0.727	248.000	0.467	0.042	Y	NA
268742	268743	SpyM3_0040	SpyM3_0041	rplC	rplD	TRUE	0.993	24.000	0.544	0.032	Y	NA
268743	268744	SpyM3_0041	SpyM3_0042	rplD	rplW	TRUE	0.995	0.000	0.307	0.032	Y	NA
268744	268745	SpyM3_0042	SpyM3_0043	rplW	rplB	TRUE	0.997	18.000	0.849	0.039	Y	NA
268745	268746	SpyM3_0043	SpyM3_0044	rplB	rpsS	TRUE	0.932	139.000	0.820	0.042	Y	NA
268746	268747	SpyM3_0044	SpyM3_0045	rpsS	rplV	TRUE	0.996	16.000	0.769	0.042	Y	NA
268747	268748	SpyM3_0045	SpyM3_0046	rplV	rpsC	TRUE	0.996	13.000	0.719	0.042	Y	NA
268748	268749	SpyM3_0046	SpyM3_0047	rpsC	rplP	TRUE	0.998	4.000	0.828	0.042	Y	NA
268749	268750	SpyM3_0047	SpyM3_0048	rplP	rpmC	TRUE	0.997	10.000	0.802	0.032	Y	NA
268750	268751	SpyM3_0048	SpyM3_0049	rpmC	rpsQ	TRUE	0.996	26.000	0.828	0.032	Y	NA
268751	268752	SpyM3_0049	SpyM3_0050	rpsQ	rplN	TRUE	0.995	25.000	0.791	0.042	Y	NA
268752	268753	SpyM3_0050	SpyM3_0051	rplN	rplX	TRUE	0.982	79.000	0.810	0.042	Y	NA
268753	268754	SpyM3_0051	SpyM3_0052	rplX	rplE	TRUE	0.996	24.000	0.758	0.032	Y	NA
268754	268755	SpyM3_0052	SpyM3_0053	rplE	rpsN.1	TRUE	0.994	16.000	0.496	0.032	Y	NA
268755	268756	SpyM3_0053	SpyM3_0054	rpsN.1	rpsH	TRUE	0.869	151.000	0.473	0.032	Y	NA
268756	268757	SpyM3_0054	SpyM3_0055	rpsH	rplF	TRUE	0.898	203.000	0.808	0.032	Y	NA
268757	268758	SpyM3_0055	SpyM3_0056	rplF	rplR	TRUE	0.967	105.000	0.815	0.032	Y	NA
268758	268759	SpyM3_0056	SpyM3_0057	rplR	rpsE	TRUE	0.996	19.000	0.814	0.042	Y	NA
268759	268760	SpyM3_0057	SpyM3_0058	rpsE	rpmD	TRUE	0.996	15.000	0.789	0.042	Y	NA
268760	268761	SpyM3_0058	SpyM3_0059	rpmD	rplO	TRUE	0.885	216.000	0.653	0.005	Y	NA
268761	268762	SpyM3_0059	SpyM3_0060	rplO	secY	TRUE	0.973	17.000	0.730	1.000	N	NA
268762	268763	SpyM3_0060	SpyM3_0061	secY	adk	FALSE	0.299	150.000	0.241	1.000	N	NA
268763	268764	SpyM3_0061	SpyM3_0062	adk	infA	FALSE	0.197	118.000	0.059	1.000	N	NA
268764	268765	SpyM3_0062	SpyM3_0063	infA	rpmJ	TRUE	0.912	26.000	0.067	1.000	Y	NA
268765	268766	SpyM3_0063	SpyM3_0064	rpmJ	rpsM	TRUE	0.978	18.000	0.086	0.032	Y	NA
268766	268767	SpyM3_0064	SpyM3_0065	rpsM	rpsK	TRUE	0.997	18.000	0.810	0.032	Y	NA
268767	268768	SpyM3_0065	SpyM3_0066	rpsK	rpoA	TRUE	0.858	46.000	0.308	1.000	N	NA
268768	268769	SpyM3_0066	SpyM3_0067	rpoA	rplQ	TRUE	0.980	15.000	0.873	1.000	N	NA
268769	2179439	SpyM3_0067	SpyM3_r05	rplQ		FALSE	0.019	823.000	0.000	NA		NA
2179439	400237	SpyM3_r05	SpyM3_t29		tRNA-Ala	TRUE	0.656	45.000	0.000	NA		NA
400237	2179440	SpyM3_t29	SpyM3_r06	tRNA-Ala		FALSE	0.050	296.000	0.000	NA		NA
2179440	2179441	SpyM3_r06	SpyM3_r15			FALSE	0.388	82.000	0.000	NA		NA
2179441	400238	SpyM3_r15	SpyM3_t30		tRNA-Val	TRUE	0.778	18.000	0.000	NA		NA
400238	400239	SpyM3_t30	SpyM3_t31	tRNA-Val	tRNA-Gly	TRUE	0.839	6.000	0.000	NA		NA
400239	400240	SpyM3_t31	SpyM3_t32	tRNA-Gly	tRNA-Ile	TRUE	0.697	35.000	0.000	NA		NA
400240	400241	SpyM3_t32	SpyM3_t33	tRNA-Ile	tRNA-Glu	TRUE	0.754	23.000	0.000	NA		NA
400241	400242	SpyM3_t33	SpyM3_t34	tRNA-Glu	tRNA-Ser	TRUE	0.816	11.000	0.000	NA		NA
400242	400243	SpyM3_t34	SpyM3_t35	tRNA-Ser	tRNA-Met	TRUE	0.825	10.000	0.000	NA		NA
400243	400244	SpyM3_t35	SpyM3_t36	tRNA-Met	tRNA-Phe	TRUE	0.765	21.000	0.000	NA		NA
400244	400245	SpyM3_t36	SpyM3_t37	tRNA-Phe	tRNA-Tyr	TRUE	0.772	20.000	0.000	NA		NA
400245	400246	SpyM3_t37	SpyM3_t38	tRNA-Tyr	tRNA-Trp	TRUE	0.836	7.000	0.000	NA		NA
400246	400247	SpyM3_t38	SpyM3_t39	tRNA-Trp	tRNA-His	TRUE	0.809	12.000	0.000	NA		NA
400247	400248	SpyM3_t39	SpyM3_t40	tRNA-His	tRNA-Gln	TRUE	0.833	9.000	0.000	NA		NA
400248	400249	SpyM3_t40	SpyM3_t41	tRNA-Gln	tRNA-Leu	TRUE	0.772	20.000	0.000	NA		NA
400249	268770	SpyM3_t41	SpyM3_0068	tRNA-Leu		FALSE	0.063	260.000	0.000	NA		NA
268770	268771	SpyM3_0068	SpyM3_0069		adcR	FALSE	0.018	1323.000	0.000	NA		NA
268771	268772	SpyM3_0069	SpyM3_0070	adcR	adcC	TRUE	0.919	4.000	0.192	1.000	N	NA
268772	268773	SpyM3_0070	SpyM3_0071	adcC	adcB	TRUE	0.996	-7.000	0.673	1.000	Y	NA
268774	268775	SpyM3_0072	SpyM3_0073		tyrS	TRUE	0.417	56.000	0.004	1.000	N	NA
268776	268777	SpyM3_0074	SpyM3_0075	pbp1B	rpoB	FALSE	0.024	264.000	0.000	1.000	N	NA
268777	268778	SpyM3_0075	SpyM3_0076	rpoB	rpoC	TRUE	0.986	91.000	0.851	0.002	Y	NA
268778	268779	SpyM3_0076	SpyM3_0077	rpoC		FALSE	0.145	170.000	0.007	NA		NA
268779	268780	SpyM3_0077	SpyM3_0078		comYA	TRUE	0.496	93.000	0.083	NA		NA
268780	268781	SpyM3_0078	SpyM3_0079	comYA	comYB	TRUE	0.995	-64.000	0.639	1.000	Y	NA
268781	268782	SpyM3_0079	SpyM3_0080	comYB	comYC	TRUE	0.999	2.000	0.861	0.002	Y	NA
268782	268783	SpyM3_0080	SpyM3_0081	comYC		TRUE	0.982	-40.000	0.110	NA	Y	NA
268783	268784	SpyM3_0081	SpyM3_0082			TRUE	0.994	-43.000	0.786	NA		NA
268784	268785	SpyM3_0082	SpyM3_0083		comYD	TRUE	0.978	-7.000	0.250	NA		NA
268785	268786	SpyM3_0083	SpyM3_0084	comYD		TRUE	0.978	-16.000	0.232	NA		NA
268786	268787	SpyM3_0084	SpyM3_0085			TRUE	0.469	98.000	0.087	NA		NA
268787	268788	SpyM3_0085	SpyM3_0086		ackA	TRUE	0.646	59.000	0.130	1.000	N	NA
268788	268789	SpyM3_0086	SpyM3_0087	ackA		FALSE	0.110	186.000	0.000	NA		NA
268790	268791	SpyM3_0088	SpyM3_0089	proC	pepA	TRUE	0.579	48.000	0.041	1.000	N	NA
268792	268793	SpyM3_0090	SpyM3_0091		trx.1	TRUE	0.959	-3.000	0.140	NA		NA
268793	268794	SpyM3_0091	SpyM3_0092	trx.1		TRUE	0.926	18.000	0.239	1.000		NA
268794	268795	SpyM3_0092	SpyM3_0093		ssb.1	FALSE	0.166	152.000	0.034	1.000		NA
268796	268797	SpyM3_0094	SpyM3_0095			TRUE	0.633	20.000	0.005	1.000	N	NA
268797	268798	SpyM3_0095	SpyM3_0096			TRUE	0.891	-13.000	0.034	1.000	N	NA
268798	268799	SpyM3_0096	SpyM3_0097		nra	FALSE	0.199	126.000	0.003	NA		NA
268800	268801	SpyM3_0098	SpyM3_0099	cbp		TRUE	0.943	-3.000	0.061	NA		NA
268801	268802	SpyM3_0099	SpyM3_0100			TRUE	0.856	21.000	0.061	NA		NA
268802	268803	SpyM3_0100	SpyM3_0101			TRUE	0.966	22.000	0.500	NA		NA
268803	268804	SpyM3_0101	SpyM3_0102			TRUE	0.973	53.000	1.000	NA		NA
268810	268811	SpyM3_0108	SpyM3_0109		atoD.2	TRUE	0.946	12.000	0.100	1.000	Y	NA
268811	268812	SpyM3_0109	SpyM3_0110	atoD.2		TRUE	0.994	3.000	0.200	0.003	Y	NA
268814	268815	SpyM3_0112	SpyM3_0113			TRUE	0.658	37.000	0.016	NA	N	NA
268815	268816	SpyM3_0113	SpyM3_0114			FALSE	0.027	454.000	0.000	NA		NA
268816	268817	SpyM3_0114	SpyM3_0115		ntpI	TRUE	0.913	-10.000	0.000	NA		NA
268817	268818	SpyM3_0115	SpyM3_0116	ntpI	ntpK	TRUE	0.997	2.000	0.848	0.010		NA
268818	268819	SpyM3_0116	SpyM3_0117	ntpK	ntpE	TRUE	0.884	69.000	0.045	0.005		NA
268819	268820	SpyM3_0117	SpyM3_0118	ntpE	ntpC	TRUE	0.971	16.000	0.097	0.005		NA
268820	268821	SpyM3_0118	SpyM3_0119	ntpC	ntpG	TRUE	0.998	-3.000	0.487	0.002	Y	NA
268821	268822	SpyM3_0119	SpyM3_0120	ntpG	ntpA	TRUE	0.837	201.000	0.462	0.011	Y	NA
268822	268823	SpyM3_0120	SpyM3_0121	ntpA	ntpB	TRUE	0.998	1.000	0.776	0.010	Y	NA
268823	268824	SpyM3_0121	SpyM3_0122	ntpB	ntpD	TRUE	0.983	45.000	0.238	0.005	Y	NA
268825	268826	SpyM3_0123	SpyM3_0124			TRUE	0.986	13.000	0.818	NA		NA
268827	268828	SpyM3_0125	SpyM3_0126	purA		FALSE	0.157	327.000	0.000	0.021		NA
268828	268829	SpyM3_0126	SpyM3_0127		nusG	FALSE	0.092	173.000	0.000	1.000		NA
268829	268830	SpyM3_0127	SpyM3_0128	nusG	nga	FALSE	0.024	371.000	0.000	1.000		NA
268830	268831	SpyM3_0128	SpyM3_0129	nga		TRUE	0.957	5.000	0.286	1.000		NA
268831	268832	SpyM3_0129	SpyM3_0130		slo	TRUE	0.858	24.000	0.125	1.000		NA
268833	268834	SpyM3_0131	SpyM3_0132			FALSE	0.030	400.000	0.000	NA		NA
268835	268836	SpyM3_0133	SpyM3_0134	metB	leuS	FALSE	0.036	211.000	0.000	1.000	N	NA
268836	268837	SpyM3_0134	SpyM3_0135	leuS		FALSE	0.035	307.000	0.000	1.000		NA
268837	268838	SpyM3_0135	SpyM3_0136			TRUE	0.954	71.000	0.431	0.023		NA
268838	268839	SpyM3_0136	SpyM3_0137			TRUE	0.868	123.000	0.279	0.017	Y	NA
268839	268840	SpyM3_0137	SpyM3_0138			TRUE	0.830	91.000	0.328	1.000	Y	NA
268840	268841	SpyM3_0138	SpyM3_0139			TRUE	0.989	5.000	0.536	1.000	Y	NA
268841	268842	SpyM3_0139	SpyM3_0140		araD	TRUE	0.993	2.000	0.700	1.000	Y	NA
268842	268843	SpyM3_0140	SpyM3_0141	araD		FALSE	0.086	325.000	0.200	1.000	N	NA
268843	268844	SpyM3_0141	SpyM3_0142			FALSE	0.225	253.000	0.231	NA		NA
268844	268845	SpyM3_0142	SpyM3_0143		opuAA	FALSE	0.025	488.000	0.000	NA		NA
268845	268846	SpyM3_0143	SpyM3_0144	opuAA	opuABC	TRUE	0.951	58.000	0.177	0.084	Y	NA
268846	268847	SpyM3_0144	SpyM3_0145	opuABC	polA.1	FALSE	0.086	131.000	0.003	1.000	N	NA
268847	268848	SpyM3_0145	SpyM3_0146	polA.1		FALSE	0.126	187.000	0.005	NA		NA
268848	268849	SpyM3_0146	SpyM3_0147		spf	TRUE	0.666	52.000	0.010	NA		NA
268851	268852	SpyM3_0149	SpyM3_0150	tgt		FALSE	0.077	218.000	0.004	1.000		NA
268852	268853	SpyM3_0150	SpyM3_0151			TRUE	0.900	4.000	0.039	NA		NA
268853	268854	SpyM3_0151	SpyM3_0152			FALSE	0.217	140.000	0.033	NA		NA
268854	268855	SpyM3_0152	SpyM3_0153			TRUE	0.974	0.000	0.013	0.023		NA
268857	268858	SpyM3_0155	SpyM3_0156	speG	pgi	FALSE	0.020	461.000	0.000	1.000		NA
268859	268860	SpyM3_0157	SpyM3_0158			TRUE	0.987	3.000	0.667	NA		NA
268862	268863	SpyM3_0160	SpyM3_0161	hasC.2	gpdA	TRUE	0.565	33.000	0.007	1.000	N	NA
268864	268865	SpyM3_0162	SpyM3_0163			TRUE	0.917	-7.000	0.080	1.000	N	NA
268865	268866	SpyM3_0163	SpyM3_0164			TRUE	0.998	3.000	0.720	0.009	Y	NA
268866	268867	SpyM3_0164	SpyM3_0165			FALSE	0.253	118.000	0.010	NA		NA
268867	268868	SpyM3_0165	SpyM3_0166		dut	FALSE	0.274	110.000	0.005	NA		NA
268868	268869	SpyM3_0166	SpyM3_0167	dut	radA	FALSE	0.329	81.000	0.028	1.000	N	NA
268869	268870	SpyM3_0167	SpyM3_0168	radA		FALSE	0.063	189.000	0.009	1.000	N	NA
268870	268871	SpyM3_0168	SpyM3_0169			TRUE	0.481	131.000	0.278	NA		NA
268871	268872	SpyM3_0169	SpyM3_0170		gluS	FALSE	0.137	183.000	0.008	NA		NA
268872	268873	SpyM3_0170	SpyM3_0171	gluS		FALSE	0.012	395.000	0.000	1.000	N	NA
268873	268874	SpyM3_0171	SpyM3_0172			TRUE	0.993	-3.000	0.750	NA		NA
268874	268875	SpyM3_0172	SpyM3_0173			TRUE	0.765	21.000	0.000	NA		NA
268875	268876	SpyM3_0173	SpyM3_0174			TRUE	0.983	4.000	0.571	NA		NA
268876	268877	SpyM3_0174	SpyM3_0175		rnpA	FALSE	0.009	540.000	0.000	1.000	N	NA
268877	268878	SpyM3_0175	SpyM3_0176	rnpA		TRUE	0.903	-34.000	0.052	1.000	N	NA
268878	268879	SpyM3_0176	SpyM3_0177			TRUE	0.887	12.000	0.106	1.000		NA
268879	268880	SpyM3_0177	SpyM3_0178		rpmH	FALSE	0.038	315.000	0.002	1.000		NA
268880	268881	SpyM3_0178	SpyM3_0179	rpmH		FALSE	0.043	274.000	0.000	1.000		NA
268881	268882	SpyM3_0179	SpyM3_0180			TRUE	0.962	49.000	0.500	1.000	Y	NA
268882	268883	SpyM3_0180	SpyM3_0181			TRUE	0.452	76.000	0.000	NA		NA
268883	268884	SpyM3_0181	SpyM3_0182			FALSE	0.358	125.000	0.133	NA		NA
268884	268885	SpyM3_0182	SpyM3_0183			TRUE	0.998	13.000	1.000	0.041	Y	NA
268885	268886	SpyM3_0183	SpyM3_0184			FALSE	0.131	157.000	0.000	NA		NA
268886	268887	SpyM3_0184	SpyM3_0185		nanH	TRUE	0.809	12.000	0.000	NA		NA
268887	268888	SpyM3_0185	SpyM3_0186	nanH		TRUE	0.798	22.000	0.108	1.000	N	NA
268890	268891	SpyM3_0188	SpyM3_0189			TRUE	0.978	-28.000	0.058	NA	Y	NA
268891	268892	SpyM3_0189	SpyM3_0190		ksgA	FALSE	0.253	114.000	0.093	1.000	N	NA
268892	268893	SpyM3_0190	SpyM3_0191	ksgA		FALSE	0.025	425.000	0.003	1.000		NA
268893	268894	SpyM3_0191	SpyM3_0192		rpe	TRUE	0.938	10.000	0.213	1.000		NA
268894	268895	SpyM3_0192	SpyM3_0193	rpe		TRUE	0.946	-7.000	0.166	1.000	N	NA
268895	268896	SpyM3_0193	SpyM3_0194			TRUE	0.905	2.000	0.030	NA		NA
268896	268897	SpyM3_0194	SpyM3_0195		cbf	TRUE	0.942	-10.000	0.030	NA		NA
268897	268898	SpyM3_0195	SpyM3_0196	cbf	purR	FALSE	0.081	267.000	0.052	1.000		NA
268898	268899	SpyM3_0196	SpyM3_0197	purR	prgA	TRUE	0.937	-9.000	0.017	NA		NA
268899	268900	SpyM3_0197	SpyM3_0198	prgA	rpsL	FALSE	0.120	208.000	0.012	NA		NA
268900	268901	SpyM3_0198	SpyM3_0199	rpsL	rpsG	TRUE	0.989	21.000	0.224	0.006	Y	NA
268901	268902	SpyM3_0199	SpyM3_0200	rpsG	fusA	FALSE	0.321	485.000	0.579	1.000	Y	NA
268902	268903	SpyM3_0200	SpyM3_0201	fusA	plr	FALSE	0.015	341.000	0.000	1.000	N	NA
268904	268905	SpyM3_0202	SpyM3_0203			TRUE	0.996	-7.000	0.758	1.000	Y	NA
268906	268907	SpyM3_0204	SpyM3_0205		bacA	TRUE	0.718	66.000	0.118	NA		NA
268907	268908	SpyM3_0205	SpyM3_0206	bacA	mecA	FALSE	0.140	218.000	0.132	NA	N	NA
268908	268909	SpyM3_0206	SpyM3_0207	mecA	rgpG	TRUE	0.823	58.000	0.267	NA	N	NA
268909	268910	SpyM3_0207	SpyM3_0208	rgpG		FALSE	0.130	122.000	0.013	1.000	N	NA
268910	268911	SpyM3_0208	SpyM3_0209			TRUE	0.684	95.000	0.139	1.000	Y	NA
268911	268912	SpyM3_0209	SpyM3_0210			TRUE	0.951	31.000	0.606	1.000	N	NA
268912	268913	SpyM3_0210	SpyM3_0211			TRUE	0.971	-13.000	0.292	1.000	N	NA
268913	268914	SpyM3_0211	SpyM3_0212			TRUE	0.990	-7.000	0.152	0.002	N	NA
268915	268916	SpyM3_0213	SpyM3_0214		dacA	TRUE	0.825	168.000	0.231	0.002	Y	NA
268917	268918	SpyM3_0215	SpyM3_0216	oppA	oppB	TRUE	0.961	65.000	0.273	0.041	Y	NA
268918	268919	SpyM3_0216	SpyM3_0217	oppB	oppC	TRUE	0.997	0.000	0.556	0.041	Y	NA
268919	268920	SpyM3_0217	SpyM3_0218	oppC	oppD	TRUE	0.990	9.000	0.650	1.000	Y	NA
268920	268921	SpyM3_0218	SpyM3_0219	oppD	oppF	TRUE	0.996	-7.000	0.095	0.001	Y	NA
268921	2179442	SpyM3_0219	SpyM3_r07	oppF		FALSE	0.019	994.000	0.000	NA		NA
2179442	400250	SpyM3_r07	SpyM3_t42		tRNA-Ala	TRUE	0.656	45.000	0.000	NA		NA
400250	2179443	SpyM3_t42	SpyM3_r08	tRNA-Ala		FALSE	0.050	296.000	0.000	NA		NA
2179443	2179444	SpyM3_r08	SpyM3_r16			FALSE	0.388	82.000	0.000	NA		NA
2179444	400251	SpyM3_r16	SpyM3_t43		tRNA-Asn	TRUE	0.839	6.000	0.000	NA		NA
400251	400252	SpyM3_t43	SpyM3_t44	tRNA-Asn	tRNA-Arg	TRUE	0.414	80.000	0.000	NA		NA
400252	268922	SpyM3_t44	SpyM3_0220	tRNA-Arg	comX.1	FALSE	0.330	92.000	0.000	NA		NA
268922	268923	SpyM3_0220	SpyM3_0221	comX.1		FALSE	0.022	610.000	0.000	NA		NA
268923	268924	SpyM3_0221	SpyM3_0222			TRUE	0.914	-19.000	0.000	NA		NA
268924	268925	SpyM3_0222	SpyM3_0223			FALSE	0.207	106.000	0.000	1.000		NA
268925	268926	SpyM3_0223	SpyM3_0224			TRUE	0.985	0.000	0.555	1.000		NA
268926	268927	SpyM3_0224	SpyM3_0225			TRUE	0.848	25.000	0.068	NA		NA
268927	268928	SpyM3_0225	SpyM3_0226			TRUE	0.665	69.000	0.150	NA	N	NA
268928	268929	SpyM3_0226	SpyM3_0227			TRUE	0.982	-3.000	0.199	1.000	Y	NA
268929	268930	SpyM3_0227	SpyM3_0228			TRUE	0.953	0.000	0.149	NA		NA
268930	268931	SpyM3_0228	SpyM3_0229			TRUE	0.780	48.000	0.085	NA		NA
268931	268932	SpyM3_0229	SpyM3_0230			FALSE	0.159	222.000	0.094	NA		NA
268932	268933	SpyM3_0230	SpyM3_0231			FALSE	0.029	482.000	0.003	NA		NA
268933	268934	SpyM3_0231	SpyM3_0232		atmA	FALSE	0.097	203.000	0.000	NA		NA
268934	268935	SpyM3_0232	SpyM3_0233	atmA	atmB	FALSE	0.025	324.000	0.000	NA	N	NA
268935	268936	SpyM3_0233	SpyM3_0234	atmB	atmD	FALSE	0.160	250.000	0.000	NA	Y	NA
268936	268937	SpyM3_0234	SpyM3_0235	atmD	atmE	TRUE	0.996	1.000	0.938	1.000	Y	NA
268940	268941	SpyM3_0238	SpyM3_0239			TRUE	0.996	10.000	0.490	0.004	Y	NA
268941	268942	SpyM3_0239	SpyM3_0240		gidB	FALSE	0.344	69.000	0.006	1.000	N	NA
268943	268944	SpyM3_0241	SpyM3_0242	lemA	htpX	TRUE	0.873	47.000	0.222	NA		NA
268944	268945	SpyM3_0242	SpyM3_0243	htpX		FALSE	0.083	234.000	0.002	NA		NA
268945	268946	SpyM3_0243	SpyM3_0244		csrR	FALSE	0.079	268.000	0.014	NA		NA
268946	268947	SpyM3_0244	SpyM3_0245	csrR	csrS	TRUE	0.994	6.000	0.438	0.082	Y	NA
268947	268948	SpyM3_0245	SpyM3_0246	csrS		FALSE	0.067	215.000	0.007	NA	N	NA
268948	268949	SpyM3_0246	SpyM3_0247		dnaB	TRUE	0.944	-16.000	0.109	NA	N	NA
268949	268950	SpyM3_0247	SpyM3_0248	dnaB	dnaI	TRUE	0.996	1.000	0.817	NA	Y	NA
268950	268951	SpyM3_0248	SpyM3_0249	dnaI	pgdA	TRUE	0.537	63.000	0.008	1.000		NA
268951	268952	SpyM3_0249	SpyM3_0250	pgdA	snf	FALSE	0.086	207.000	0.004	1.000		NA
268952	268953	SpyM3_0250	SpyM3_0251	snf		FALSE	0.177	244.000	0.151	NA		NA
268953	268954	SpyM3_0251	SpyM3_0252		murC.1	TRUE	0.737	40.000	0.013	NA		NA
268954	268955	SpyM3_0252	SpyM3_0253	murC.1		TRUE	0.662	46.000	0.014	1.000		NA
268955	268956	SpyM3_0253	SpyM3_0254			FALSE	0.387	118.000	0.120	NA		NA
268956	268957	SpyM3_0254	SpyM3_0255		greA	TRUE	0.644	73.000	0.079	NA		NA
268958	268959	SpyM3_0256	SpyM3_0257			TRUE	0.511	82.000	0.154	1.000	N	NA
268960	268961	SpyM3_0258	SpyM3_0259			TRUE	0.585	66.000	0.043	1.000		NA
268961	268962	SpyM3_0259	SpyM3_0260			TRUE	0.900	15.000	0.123	NA		NA
268962	268963	SpyM3_0260	SpyM3_0261			FALSE	0.115	178.000	0.000	NA		NA
268963	268964	SpyM3_0261	SpyM3_0262		glr	FALSE	0.151	178.000	0.014	NA		NA
268964	268965	SpyM3_0262	SpyM3_0263	glr		TRUE	0.874	-3.000	0.034	1.000	N	NA
268965	268966	SpyM3_0263	SpyM3_0264			TRUE	0.948	-21.000	0.085	1.000		NA
268966	268967	SpyM3_0264	SpyM3_0265			TRUE	0.932	-3.000	0.065	1.000		NA
268967	268968	SpyM3_0265	SpyM3_0266			TRUE	0.945	-3.000	0.111	1.000		NA
268968	268969	SpyM3_0266	SpyM3_0267			TRUE	0.913	0.000	0.017	NA		NA
268969	268970	SpyM3_0267	SpyM3_0268			TRUE	0.990	-3.000	0.570	NA		NA
268970	268971	SpyM3_0268	SpyM3_0269			TRUE	0.421	120.000	0.224	NA	N	NA
268971	268972	SpyM3_0269	SpyM3_0270			TRUE	0.925	-3.000	0.014	NA		NA
268972	268973	SpyM3_0270	SpyM3_0271			FALSE	0.128	178.000	0.002	NA		NA
268973	268974	SpyM3_0271	SpyM3_0272			FALSE	0.044	310.000	0.000	NA		NA
268974	268975	SpyM3_0272	SpyM3_0273			TRUE	0.986	2.000	0.600	NA		NA
268975	268976	SpyM3_0273	SpyM3_0274			FALSE	0.069	293.000	0.050	1.000		NA
268976	268977	SpyM3_0274	SpyM3_0275			TRUE	0.938	39.000	0.408	NA		NA
268977	268978	SpyM3_0275	SpyM3_0276		hlyX	FALSE	0.219	133.000	0.023	NA		NA
268978	268979	SpyM3_0276	SpyM3_0277	hlyX	pflC	TRUE	0.538	78.000	0.028	NA		NA
268979	268980	SpyM3_0277	SpyM3_0278	pflC		FALSE	0.135	125.000	0.023	1.000	N	NA
268980	268981	SpyM3_0278	SpyM3_0279			TRUE	0.535	76.000	0.015	NA		NA
268982	268983	SpyM3_0280	SpyM3_0281	fhuG.1	fhuB	TRUE	0.999	-3.000	0.857	0.040	Y	NA
268983	268984	SpyM3_0281	SpyM3_0282	fhuB	fhuD.1	TRUE	0.984	-10.000	0.179	1.000	Y	NA
268984	268985	SpyM3_0282	SpyM3_0283	fhuD.1	fhuC.1	TRUE	0.990	26.000	0.889	1.000	Y	NA
268985	268986	SpyM3_0283	SpyM3_0284	fhuC.1	murE	FALSE	0.066	246.000	0.062	1.000	N	NA
268987	268988	SpyM3_0285	SpyM3_0286		upp	FALSE	0.109	168.000	0.002	1.000		NA
268988	268989	SpyM3_0286	SpyM3_0287	upp	clpP.1	FALSE	0.047	223.000	0.010	1.000	N	NA
268989	268990	SpyM3_0287	SpyM3_0288	clpP.1		FALSE	0.045	492.000	0.065	NA		NA
268990	268991	SpyM3_0288	SpyM3_0289		tmk	FALSE	0.068	249.000	0.000	NA		NA
268991	268992	SpyM3_0289	SpyM3_0290	tmk		TRUE	0.907	18.000	0.254	1.000	N	NA
268992	268993	SpyM3_0290	SpyM3_0291			FALSE	0.034	664.000	0.038	NA		NA
268993	268994	SpyM3_0291	SpyM3_0292			TRUE	0.898	5.000	0.043	NA		NA
268994	268995	SpyM3_0292	SpyM3_0293			TRUE	0.767	27.000	0.005	NA		NA
268999	269000	SpyM3_0297	SpyM3_0298	lctO	prtS	FALSE	0.029	344.000	0.000	1.000		NA
269000	269001	SpyM3_0298	SpyM3_0299	prtS		FALSE	0.020	748.000	0.000	NA		NA
269001	269002	SpyM3_0299	SpyM3_0300		metS	FALSE	0.071	243.000	0.000	NA		NA
269002	269003	SpyM3_0300	SpyM3_0301	metS	nrdF.2	FALSE	0.009	494.000	0.000	1.000	N	NA
269003	269004	SpyM3_0301	SpyM3_0302	nrdF.2	nrdI.2	TRUE	0.992	4.000	0.643	NA	Y	NA
269004	269005	SpyM3_0302	SpyM3_0303	nrdI.2	nrdE.2	TRUE	0.998	-33.000	1.000	NA	Y	NA
269007	269008	SpyM3_0305	SpyM3_0306			FALSE	0.105	191.000	0.000	NA		NA
269010	269011	SpyM3_0308	SpyM3_0309			TRUE	0.993	-7.000	0.710	NA		NA
269011	269012	SpyM3_0309	SpyM3_0310			TRUE	0.560	76.000	0.067	1.000		NA
269012	269013	SpyM3_0310	SpyM3_0311		glpT	FALSE	0.031	333.000	0.000	1.000		NA
269013	269014	SpyM3_0311	SpyM3_0312	glpT	glmU	FALSE	0.059	173.000	0.002	1.000	N	NA
269014	269015	SpyM3_0312	SpyM3_0313	glmU		TRUE	0.620	31.000	0.015	1.000	N	NA
269015	269016	SpyM3_0313	SpyM3_0314			TRUE	0.917	0.000	0.025	NA		NA
269016	269017	SpyM3_0314	SpyM3_0315		pfs	TRUE	0.847	20.000	0.041	NA		NA
269017	269018	SpyM3_0315	SpyM3_0316	pfs		FALSE	0.138	151.000	0.000	NA		NA
269020	269021	SpyM3_0318	SpyM3_0319	mtsA	mtsB	TRUE	0.843	64.000	0.135	1.000	Y	NA
269021	269022	SpyM3_0319	SpyM3_0320	mtsB	mtsC	TRUE	0.968	1.000	0.130	1.000	Y	NA
269026	269027	SpyM3_0324	SpyM3_0325	rplK	rplA	TRUE	0.966	106.000	0.838	0.040	Y	NA
269027	269028	SpyM3_0325	SpyM3_0326	rplA	pyrH	FALSE	0.020	323.000	0.002	1.000	N	NA
269028	269029	SpyM3_0326	SpyM3_0327	pyrH	rrf	TRUE	0.953	30.000	0.626	1.000	N	NA
269029	269030	SpyM3_0327	SpyM3_0328	rrf		FALSE	0.075	238.000	0.012	1.000		NA
269030	269031	SpyM3_0328	SpyM3_0329		msrA.2	TRUE	0.496	73.000	0.016	1.000		NA
269031	269032	SpyM3_0329	SpyM3_0330	msrA.2		TRUE	0.937	-3.000	0.080	1.000		NA
269032	269033	SpyM3_0330	SpyM3_0331			FALSE	0.150	156.000	0.023	1.000		NA
269033	269034	SpyM3_0331	SpyM3_0332			FALSE	0.043	315.000	0.000	NA		NA
269034	269035	SpyM3_0332	SpyM3_0333		phoH	FALSE	0.056	297.000	0.004	NA		NA
269035	269036	SpyM3_0333	SpyM3_0334	phoH		TRUE	0.565	46.000	0.005	NA	N	NA
269036	269037	SpyM3_0334	SpyM3_0335			FALSE	0.189	129.000	0.003	NA		NA
269037	269038	SpyM3_0335	SpyM3_0336		dgk	TRUE	0.944	-19.000	0.035	NA		NA
269038	269039	SpyM3_0336	SpyM3_0337	dgk	era	FALSE	0.272	120.000	0.063	1.000		NA
269039	269040	SpyM3_0337	SpyM3_0338	era		TRUE	0.910	-25.000	0.007	1.000		NA
269040	269041	SpyM3_0338	SpyM3_0339			FALSE	0.018	1466.000	0.000	NA		NA
269041	269042	SpyM3_0339	SpyM3_0340			TRUE	0.959	13.000	0.333	NA		NA
269042	269043	SpyM3_0340	SpyM3_0341			FALSE	0.036	361.000	0.000	NA		NA
269043	269044	SpyM3_0341	SpyM3_0342			TRUE	0.956	50.000	0.667	NA		NA
269044	269045	SpyM3_0342	SpyM3_0343			FALSE	0.019	849.000	0.000	NA		NA
269045	269046	SpyM3_0343	SpyM3_0344			FALSE	0.324	93.000	0.000	NA		NA
269048	269049	SpyM3_0346	SpyM3_0347	mutR	fpg	FALSE	0.109	172.000	0.004	1.000		NA
269049	269050	SpyM3_0347	SpyM3_0348	fpg		TRUE	0.899	-3.000	0.066	1.000	N	NA
269050	269051	SpyM3_0348	SpyM3_0349			FALSE	0.082	190.000	0.000	1.000		NA
269051	269052	SpyM3_0349	SpyM3_0350			FALSE	0.187	122.000	0.007	1.000		NA
269052	269053	SpyM3_0350	SpyM3_0351			FALSE	0.233	189.000	0.007	0.066	N	NA
269053	269054	SpyM3_0351	SpyM3_0352		vacB	FALSE	0.117	172.000	0.064	1.000	N	NA
269054	269055	SpyM3_0352	SpyM3_0353	vacB	smpB	TRUE	0.971	3.000	0.143	0.036	N	NA
269055	269056	SpyM3_0353	SpyM3_0354	smpB		TRUE	0.890	15.000	0.000	1.000	Y	NA
269057	269058	SpyM3_0355	SpyM3_0356	pcp		TRUE	0.894	50.000	0.300	NA		NA
269058	269059	SpyM3_0356	SpyM3_0357			TRUE	0.994	0.000	0.939	NA		NA
269059	269060	SpyM3_0357	SpyM3_0358			FALSE	0.090	211.000	0.000	NA		NA
269060	269061	SpyM3_0358	SpyM3_0359		gloA	FALSE	0.325	85.000	0.012	NA	N	NA
269061	269062	SpyM3_0359	SpyM3_0360	gloA		TRUE	0.752	11.000	0.019	1.000	N	NA
269062	269063	SpyM3_0360	SpyM3_0361		pepQ	TRUE	0.595	49.000	0.053	1.000	N	NA
269064	269065	SpyM3_0362	SpyM3_0363	ccpA		FALSE	0.130	131.000	0.033	1.000	N	NA
269065	269066	SpyM3_0363	SpyM3_0364			TRUE	0.996	2.000	0.413	0.011	Y	NA
269066	269067	SpyM3_0364	SpyM3_0365		thrS	FALSE	0.011	422.000	0.000	1.000	N	NA
269067	269068	SpyM3_0365	SpyM3_0366	thrS		FALSE	0.152	141.000	0.012	1.000		NA
269068	269069	SpyM3_0366	SpyM3_0367			TRUE	0.861	2.000	0.000	NA		NA
269069	269070	SpyM3_0367	SpyM3_0368			TRUE	0.911	2.000	0.042	NA		NA
269070	269071	SpyM3_0368	SpyM3_0369			FALSE	0.020	746.000	0.000	NA		NA
269071	269072	SpyM3_0369	SpyM3_0370			TRUE	0.995	-43.000	0.576	1.000	Y	NA
269072	269073	SpyM3_0370	SpyM3_0371			TRUE	0.404	96.000	0.030	NA		NA
269073	269074	SpyM3_0371	SpyM3_0372		vicR	FALSE	0.163	162.000	0.013	NA		NA
269074	269075	SpyM3_0372	SpyM3_0373	vicR	vicK	TRUE	0.998	-7.000	0.597	0.056	Y	NA
269075	269076	SpyM3_0373	SpyM3_0374	vicK	vicX	TRUE	0.877	4.000	0.038	1.000		NA
269076	269077	SpyM3_0374	SpyM3_0375	vicX	acpA	FALSE	0.024	443.000	0.002	1.000		NA
269077	269078	SpyM3_0375	SpyM3_0376	acpA	smc	TRUE	0.899	1.000	0.120	1.000	N	NA
269080	269081	SpyM3_0378	SpyM3_0379	aroE.2		TRUE	0.838	-3.000	0.000	NA	N	NA
269081	269082	SpyM3_0379	SpyM3_0380			TRUE	0.861	2.000	0.000	NA		NA
269082	269083	SpyM3_0380	SpyM3_0381			TRUE	0.910	-7.000	0.000	NA		NA
269083	269084	SpyM3_0381	SpyM3_0382			TRUE	0.825	10.000	0.000	NA		NA
269084	269085	SpyM3_0382	SpyM3_0383			TRUE	0.914	-16.000	0.000	NA		NA
269085	269086	SpyM3_0383	SpyM3_0384			TRUE	0.595	55.000	0.000	NA		NA
269086	269087	SpyM3_0384	SpyM3_0385			FALSE	0.021	692.000	0.000	NA		NA
269087	269088	SpyM3_0385	SpyM3_0386			FALSE	0.165	118.000	0.000	1.000		NA
269089	269090	SpyM3_0387	SpyM3_0388			TRUE	0.987	-10.000	0.400	NA		NA
269090	269091	SpyM3_0388	SpyM3_0389			TRUE	0.900	-3.000	0.000	NA		NA
269091	269092	SpyM3_0389	SpyM3_0390			TRUE	0.912	-9.000	0.000	NA		NA
269092	269093	SpyM3_0390	SpyM3_0392			TRUE	0.982	0.000	0.429	NA		NA
269094	269095	SpyM3_0391	SpyM3_0393			TRUE	0.590	56.000	0.000	NA		NA
269095	269096	SpyM3_0393	SpyM3_0394			TRUE	0.972	0.000	0.273	NA		NA
269096	269097	SpyM3_0394	SpyM3_0395			FALSE	0.026	455.000	0.000	NA		NA
269097	269098	SpyM3_0395	SpyM3_0396			FALSE	0.228	114.000	0.000	NA		NA
269099	269100	SpyM3_0397	SpyM3_0398			TRUE	0.977	48.000	0.333	0.064	Y	NA
269101	269102	SpyM3_0399	SpyM3_0400			TRUE	0.991	4.000	0.375	0.022		NA
269102	269103	SpyM3_0400	SpyM3_0401		ftsY	TRUE	0.962	0.000	0.007	0.079		NA
269105	269106	SpyM3_0403	SpyM3_0404	bglG		TRUE	0.960	2.000	0.259	1.000		NA
269106	269107	SpyM3_0404	SpyM3_0405		bglA.1	TRUE	0.970	19.000	0.318	1.000	Y	NA
269108	269109	SpyM3_0406	SpyM3_0407			TRUE	0.993	0.000	0.841	NA		NA
269110	269111	SpyM3_0408	SpyM3_0409			FALSE	0.096	206.000	0.000	NA		NA
269111	269112	SpyM3_0409	SpyM3_0410			TRUE	0.976	-58.000	0.215	NA		NA
269112	269113	SpyM3_0410	SpyM3_0411			TRUE	0.664	64.000	0.051	NA		NA
269113	269114	SpyM3_0411	SpyM3_0412		ptsK	FALSE	0.145	305.000	0.017	NA	Y	NA
269114	269115	SpyM3_0412	SpyM3_0413	ptsK	lgt	TRUE	0.981	-3.000	0.494	1.000	N	NA
269115	269116	SpyM3_0413	SpyM3_0414	lgt		TRUE	0.864	22.000	0.079	NA		NA
269116	269117	SpyM3_0414	SpyM3_0415			TRUE	0.974	-7.000	0.206	NA		NA
269119	269120	SpyM3_0417	SpyM3_0418			TRUE	0.896	102.000	0.156	0.004	Y	NA
269120	269121	SpyM3_0418	SpyM3_0419			FALSE	0.091	210.000	0.000	NA		NA
269124	269125	SpyM3_0422	SpyM3_0423			FALSE	0.055	341.000	0.018	NA		NA
269125	269126	SpyM3_0423	SpyM3_0424			TRUE	0.401	90.000	0.010	NA		NA
269126	269127	SpyM3_0424	SpyM3_0425			FALSE	0.080	269.000	0.016	NA		NA
269128	269129	SpyM3_0426	SpyM3_0427			TRUE	0.986	-16.000	0.375	NA		NA
269130	269131	SpyM3_0428	SpyM3_0429		pepF	TRUE	0.904	-7.000	0.059	1.000	N	NA
269132	269133	SpyM3_0430	SpyM3_0431	ppc	ftsW	FALSE	0.092	170.000	0.028	1.000	N	NA
269133	269134	SpyM3_0431	SpyM3_0432	ftsW	tufA	FALSE	0.014	355.000	0.000	1.000	N	NA
269134	269135	SpyM3_0432	SpyM3_0433	tufA	tpi	FALSE	0.036	241.000	0.003	1.000	N	NA
269136	269137	SpyM3_0434	SpyM3_0435	murN	murM.1	TRUE	0.996	-13.000	0.200	0.011	Y	NA
269137	269138	SpyM3_0435	SpyM3_0436	murM.1		TRUE	0.983	0.000	0.500	1.000		NA
269138	269139	SpyM3_0436	SpyM3_0437			FALSE	0.140	150.000	0.000	NA		NA
269139	269140	SpyM3_0437	SpyM3_0438			TRUE	0.483	72.000	0.000	NA		NA
269141	269142	SpyM3_0439	SpyM3_0440		pacL	FALSE	0.076	230.000	0.000	NA		NA
269143	269144	SpyM3_0441	SpyM3_0442	regR		TRUE	0.922	64.000	0.562	NA		NA
269144	269145	SpyM3_0442	SpyM3_0443		agaD	TRUE	0.786	87.000	0.375	NA		NA
269145	269146	SpyM3_0443	SpyM3_0444	agaD	agaW	TRUE	0.999	-13.000	0.933	0.022	Y	NA
269146	269147	SpyM3_0444	SpyM3_0445	agaW	agaV	TRUE	0.997	19.000	0.933	0.022	Y	NA
269147	269148	SpyM3_0445	SpyM3_0446	agaV	ugl	TRUE	0.869	36.000	0.200	1.000		NA
269148	269149	SpyM3_0446	SpyM3_0447	ugl	agaF	TRUE	0.936	0.000	0.120	1.000		NA
269150	269151	SpyM3_0448	SpyM3_0449			TRUE	0.858	25.000	0.197	1.000	N	NA
269151	269152	SpyM3_0449	SpyM3_0450		kdgK	TRUE	0.915	29.000	0.094	1.000	Y	NA
269152	269153	SpyM3_0450	SpyM3_0451	kdgK	kgdA	TRUE	0.967	5.000	0.167	1.000	Y	NA
269153	269154	SpyM3_0451	SpyM3_0452	kgdA		FALSE	0.140	297.000	0.000	0.049		NA
269154	269155	SpyM3_0452	SpyM3_0453			FALSE	0.016	696.000	0.000	1.000		NA
269155	269156	SpyM3_0453	SpyM3_0454		prfB	FALSE	0.060	187.000	0.006	1.000	N	NA
269156	269157	SpyM3_0454	SpyM3_0455	prfB	ftsE	TRUE	0.753	19.000	0.053	1.000	N	NA
269157	269158	SpyM3_0455	SpyM3_0456	ftsE	ftsX	TRUE	0.992	-7.000	0.431	1.000	Y	NA
269160	269161	SpyM3_0458	SpyM3_0459		dinG	FALSE	0.112	108.000	0.000	1.000	N	NA
269161	269162	SpyM3_0459	SpyM3_0460	dinG	aspC	FALSE	0.015	346.000	0.000	1.000	N	NA
269162	269163	SpyM3_0460	SpyM3_0461	aspC	asnS	TRUE	0.766	21.000	0.068	1.000	N	NA
269163	269164	SpyM3_0461	SpyM3_0462	asnS		FALSE	0.029	414.000	0.000	NA		NA
269164	269165	SpyM3_0462	SpyM3_0463			TRUE	0.399	141.000	0.214	NA		NA
269165	269166	SpyM3_0463	SpyM3_0464			TRUE	0.987	-3.000	0.470	NA		NA
269166	269167	SpyM3_0464	SpyM3_0465		pepD	FALSE	0.209	133.000	0.015	NA		NA
269167	269168	SpyM3_0465	SpyM3_0466	pepD	adcA	FALSE	0.299	152.000	0.250	1.000	N	NA
269168	269169	SpyM3_0466	SpyM3_0467	adcA		FALSE	0.161	148.000	0.091	1.000	N	NA
269169	269170	SpyM3_0467	SpyM3_0468		agaS	TRUE	0.864	20.000	0.178	1.000	N	NA
269171	269172	SpyM3_0469	SpyM3_0470	rpmE		FALSE	0.250	115.000	0.020	1.000		NA
269173	269174	SpyM3_0471	SpyM3_0472	flaV		FALSE	0.191	175.000	0.167	1.000	N	NA
269174	269175	SpyM3_0472	SpyM3_0473			TRUE	0.922	-7.000	0.094	1.000	N	NA
269175	269176	SpyM3_0473	SpyM3_0474		rplS	FALSE	0.131	115.000	0.006	1.000	N	NA
269176	400253	SpyM3_0474	SpyM3_t45	rplS	tRNA-Arg	FALSE	0.068	248.000	0.000	NA		NA
400253	269177	SpyM3_t45	SpyM3_0475	tRNA-Arg		FALSE	0.021	697.000	0.000	NA		NA
269177	269178	SpyM3_0475	SpyM3_0476		gyrB	TRUE	0.876	1.000	0.013	1.000		NA
269178	269179	SpyM3_0476	SpyM3_0477	gyrB		FALSE	0.020	368.000	0.011	1.000	N	NA
269181	269182	SpyM3_0479	SpyM3_0480	eno	sagA	FALSE	0.022	562.000	0.000	NA		NA
269182	269183	SpyM3_0480	SpyM3_0481	sagA	sagB	FALSE	0.080	222.000	0.000	NA		NA
269183	269184	SpyM3_0481	SpyM3_0482	sagB	sagC	TRUE	0.970	-3.000	0.200	NA		NA
269184	269185	SpyM3_0482	SpyM3_0483	sagC		TRUE	0.948	20.000	0.318	NA		NA
269185	269186	SpyM3_0483	SpyM3_0484			TRUE	0.965	-25.000	0.136	NA		NA
269186	269187	SpyM3_0484	SpyM3_0485			TRUE	0.993	-3.000	0.750	NA		NA
269187	269188	SpyM3_0485	SpyM3_0486			TRUE	0.979	23.000	0.750	NA		NA
269188	269189	SpyM3_0486	SpyM3_0487		sagH	TRUE	0.967	9.000	0.500	1.000	N	NA
269189	269190	SpyM3_0487	SpyM3_0488	sagH		TRUE	0.995	-3.000	0.160	0.008	Y	NA
269190	269191	SpyM3_0488	SpyM3_0489			FALSE	0.017	571.000	0.000	1.000		NA
269191	269192	SpyM3_0489	SpyM3_0490			FALSE	0.055	278.000	0.000	NA		NA
269192	269193	SpyM3_0490	SpyM3_0491		lig	FALSE	0.128	195.000	0.010	NA		NA
269193	269194	SpyM3_0491	SpyM3_0492	lig		TRUE	0.703	14.000	0.013	1.000	N	NA
269194	269195	SpyM3_0492	SpyM3_0493			FALSE	0.023	392.000	0.000	1.000		NA
269195	269196	SpyM3_0493	SpyM3_0494			TRUE	0.966	35.000	0.189	0.009		NA
269196	269197	SpyM3_0494	SpyM3_0495			TRUE	0.978	18.000	0.032	0.009	Y	NA
269197	269198	SpyM3_0495	SpyM3_0496			TRUE	0.995	0.000	0.222	0.009	Y	NA
269198	269199	SpyM3_0496	SpyM3_0497			TRUE	0.998	16.000	0.864	0.009	Y	NA
269199	269200	SpyM3_0497	SpyM3_0498			TRUE	0.997	16.000	0.846	0.009	Y	NA
269200	269201	SpyM3_0498	SpyM3_0499			TRUE	0.927	162.000	0.724	0.009	Y	NA
269201	269202	SpyM3_0499	SpyM3_0500			TRUE	0.998	13.000	0.837	0.009	Y	NA
269202	269203	SpyM3_0500	SpyM3_0501			FALSE	0.093	266.000	0.039	NA		NA
269203	269204	SpyM3_0501	SpyM3_0502		murA	TRUE	0.841	65.000	0.279	NA		NA
269204	269205	SpyM3_0502	SpyM3_0503	murA		TRUE	0.928	4.000	0.110	NA		NA
269205	269206	SpyM3_0503	SpyM3_0504		endA	TRUE	0.689	36.000	0.000	NA		NA
269206	269207	SpyM3_0504	SpyM3_0505	endA	endA	TRUE	0.982	-13.000	0.000	0.006		NA
269207	269208	SpyM3_0505	SpyM3_0506	endA	pheS	FALSE	0.041	283.000	0.000	1.000		NA
269208	269209	SpyM3_0506	SpyM3_0507	pheS	pheT	TRUE	0.856	255.000	0.574	0.001	Y	NA
269209	269210	SpyM3_0507	SpyM3_0508	pheT		FALSE	0.129	110.000	0.002	1.000	N	NA
269210	269211	SpyM3_0508	SpyM3_0509			TRUE	0.924	-7.000	0.006	NA		NA
269211	269212	SpyM3_0509	SpyM3_0510			TRUE	0.660	73.000	0.095	NA		NA
269212	269213	SpyM3_0510	SpyM3_0511			TRUE	0.970	10.000	0.444	1.000		NA
269215	269216	SpyM3_0513	SpyM3_0514	rexB	rexA	TRUE	0.991	-39.000	0.070	0.063	Y	NA
269216	269217	SpyM3_0514	SpyM3_0515	rexA		FALSE	0.063	140.000	0.000	1.000	N	NA
269217	269218	SpyM3_0515	SpyM3_0516		rpsU	FALSE	0.172	141.000	0.027	1.000		NA
269220	269221	SpyM3_0518	SpyM3_0519	dnaG	rpoD	TRUE	0.918	9.000	0.209	1.000	N	NA
269221	269222	SpyM3_0519	SpyM3_0520	rpoD		FALSE	0.117	236.000	0.044	NA		NA
269222	269223	SpyM3_0520	SpyM3_0521		rmlD	FALSE	0.339	138.000	0.152	NA		NA
269223	269224	SpyM3_0521	SpyM3_0522	rmlD	rgpAc	TRUE	0.630	119.000	0.212	1.000	Y	NA
269224	269225	SpyM3_0522	SpyM3_0523	rgpAc	rgpBc	TRUE	0.982	-10.000	0.289	NA		NA
269225	269226	SpyM3_0523	SpyM3_0524	rgpBc	rgpCc	TRUE	0.967	3.000	0.289	NA		NA
269226	269227	SpyM3_0524	SpyM3_0525	rgpCc	rgpDc	TRUE	0.738	0.000	0.000	1.000	N	NA
269227	269228	SpyM3_0525	SpyM3_0526	rgpDc	rgpEc	TRUE	0.744	25.000	0.000	NA		NA
269228	269229	SpyM3_0526	SpyM3_0527	rgpEc	rgpFc	TRUE	0.984	-3.000	0.385	NA		NA
269229	269230	SpyM3_0527	SpyM3_0528	rgpFc		TRUE	0.960	-3.000	0.000	NA	Y	NA
269230	269231	SpyM3_0528	SpyM3_0529			FALSE	0.253	179.000	0.000	NA	Y	NA
269231	269232	SpyM3_0529	SpyM3_0530			TRUE	0.985	2.000	0.568	NA		NA
269232	269233	SpyM3_0530	SpyM3_0531			TRUE	0.939	-7.000	0.027	NA		NA
269233	269234	SpyM3_0531	SpyM3_0532			TRUE	0.972	-19.000	0.182	NA		NA
269234	269235	SpyM3_0532	SpyM3_0533		pepT	FALSE	0.318	94.000	0.000	NA		NA
269235	269236	SpyM3_0533	SpyM3_0534	pepT		TRUE	0.777	41.000	0.051	NA		NA
269238	269239	SpyM3_0536	SpyM3_0537		cmk	TRUE	0.791	15.000	0.012	1.000		NA
269239	269240	SpyM3_0537	SpyM3_0538	cmk	infC	FALSE	0.077	162.000	0.010	1.000	N	NA
269240	269241	SpyM3_0538	SpyM3_0539	infC	rpmI	TRUE	0.977	42.000	0.652	1.000	Y	NA
269241	269242	SpyM3_0539	SpyM3_0540	rpmI	rplT	TRUE	0.993	59.000	0.928	0.028	Y	NA
269244	269245	SpyM3_0542	SpyM3_0543		aroD	TRUE	0.948	-3.000	0.125	1.000		NA
269245	269246	SpyM3_0543	SpyM3_0544	aroD	aroF	TRUE	0.853	94.000	0.004	0.003	Y	NA
269246	269247	SpyM3_0544	SpyM3_0545	aroF		TRUE	0.596	61.000	0.005	NA		NA
269247	269248	SpyM3_0545	SpyM3_0546		gor	FALSE	0.102	221.000	0.010	NA		NA
269249	269250	SpyM3_0547	SpyM3_0548	folC.2		TRUE	0.933	30.000	0.308	NA		NA
269251	269252	SpyM3_0549	SpyM3_0550	nifS	thiI	TRUE	0.783	72.000	0.349	1.000	N	NA
269252	269253	SpyM3_0550	SpyM3_0551	thiI		FALSE	0.094	149.000	0.014	1.000	N	NA
269253	269254	SpyM3_0551	SpyM3_0552		rplU	FALSE	0.036	214.000	0.000	1.000	N	NA
269254	269255	SpyM3_0552	SpyM3_0553	rplU		TRUE	0.970	12.000	0.208	NA	Y	NA
269255	269256	SpyM3_0553	SpyM3_0554		rpmA	TRUE	0.953	28.000	0.203	NA	Y	NA
269256	269257	SpyM3_0554	SpyM3_0555	rpmA		FALSE	0.014	358.000	0.000	1.000	N	NA
269257	269258	SpyM3_0555	SpyM3_0556		lsp	TRUE	0.923	-3.000	0.119	1.000	N	NA
269258	269259	SpyM3_0556	SpyM3_0557	lsp		TRUE	0.920	-10.000	0.082	1.000	N	NA
269259	269260	SpyM3_0557	SpyM3_0558		pyrR	FALSE	0.026	395.000	0.048	1.000	N	NA
269260	269261	SpyM3_0558	SpyM3_0559	pyrR	pyrP	TRUE	0.858	61.000	0.140	1.000	Y	NA
269261	269262	SpyM3_0559	SpyM3_0560	pyrP	pyrB	TRUE	0.819	61.000	0.064	1.000	Y	NA
269262	269263	SpyM3_0560	SpyM3_0561	pyrB	carA	TRUE	0.844	44.000	0.014	1.000	Y	NA
269263	269264	SpyM3_0561	SpyM3_0562	carA	carB	TRUE	0.635	246.000	0.117	0.001	Y	NA
269264	269265	SpyM3_0562	SpyM3_0563	carB		FALSE	0.066	206.000	0.017	1.000	N	NA
269265	269266	SpyM3_0563	SpyM3_0564			TRUE	0.977	24.000	0.923	1.000	N	NA
269266	269267	SpyM3_0564	SpyM3_0565			TRUE	0.993	12.000	0.923	1.000	Y	NA
269267	269268	SpyM3_0565	SpyM3_0566			FALSE	0.026	254.000	0.000	1.000	N	NA
269268	269269	SpyM3_0566	SpyM3_0567		rpsP	FALSE	0.092	127.000	0.003	1.000	N	NA
269269	269270	SpyM3_0567	SpyM3_0568	rpsP		TRUE	0.965	10.000	0.385	1.000		NA
269270	269271	SpyM3_0568	SpyM3_0569			FALSE	0.014	960.000	0.000	1.000		NA
269271	269272	SpyM3_0569	SpyM3_0570			TRUE	0.910	20.000	0.200	1.000		NA
269274	269275	SpyM3_0572	SpyM3_0573		rimM	FALSE	0.035	215.000	0.000	1.000	N	NA
269275	269276	SpyM3_0573	SpyM3_0574	rimM	trmD	TRUE	0.996	-10.000	0.672	1.000	Y	NA
269276	269277	SpyM3_0574	SpyM3_0575	trmD		TRUE	0.798	0.000	0.007	1.000	N	NA
269277	269278	SpyM3_0575	SpyM3_0576			FALSE	0.190	178.000	0.059	NA		NA
269278	269279	SpyM3_0576	SpyM3_0577		apbA	TRUE	0.959	13.000	0.333	NA		NA
269279	269280	SpyM3_0577	SpyM3_0578	apbA	fruR	FALSE	0.025	256.000	0.000	1.000	N	NA
269280	269281	SpyM3_0578	SpyM3_0579	fruR	fruK	TRUE	0.859	120.000	0.721	1.000	Y	NA
269281	269282	SpyM3_0579	SpyM3_0580	fruK	fruA	TRUE	0.996	-3.000	0.816	1.000	Y	NA
269282	269283	SpyM3_0580	SpyM3_0581	fruA		FALSE	0.224	99.000	0.022	1.000	N	NA
269283	269284	SpyM3_0581	SpyM3_0582			TRUE	0.795	227.000	0.333	0.002	Y	NA
269286	269287	SpyM3_0584	SpyM3_0585			FALSE	0.060	228.000	0.000	1.000		NA
269287	269288	SpyM3_0585	SpyM3_0586			TRUE	0.951	0.000	0.139	NA		NA
269288	269289	SpyM3_0586	SpyM3_0587		papS	FALSE	0.217	125.000	0.009	NA		NA
269289	269290	SpyM3_0587	SpyM3_0588	papS		TRUE	0.928	-3.000	0.056	1.000		NA
269290	269291	SpyM3_0588	SpyM3_0589			FALSE	0.024	504.000	0.000	NA		NA
269291	269292	SpyM3_0589	SpyM3_0590		fms	FALSE	0.064	256.000	0.000	NA		NA
269294	269295	SpyM3_0592	SpyM3_0593			TRUE	0.988	3.000	0.800	1.000		NA
269295	269296	SpyM3_0593	SpyM3_0594			TRUE	0.988	9.000	0.533	1.000	Y	NA
269296	269297	SpyM3_0594	SpyM3_0595		mvaK1	FALSE	0.020	294.000	0.000	1.000	N	NA
269297	269298	SpyM3_0595	SpyM3_0596	mvaK1	mvaD	TRUE	0.977	63.000	0.281	0.003	Y	NA
269298	269299	SpyM3_0596	SpyM3_0597	mvaD	mvaK2	TRUE	0.997	-7.000	0.312	0.005	Y	NA
269299	269300	SpyM3_0597	SpyM3_0598	mvaK2		TRUE	0.924	-7.000	0.097	1.000	N	NA
269301	269302	SpyM3_0599	SpyM3_0600	mvaS.1	mvaS.2	TRUE	0.984	-13.000	0.183	1.000	Y	NA
269303	269304	SpyM3_0601	SpyM3_0602	thyA	dyr	TRUE	0.692	80.000	0.295	1.000	N	NA
269304	269305	SpyM3_0602	SpyM3_0603	dyr		TRUE	0.838	20.000	0.030	NA		NA
269305	269306	SpyM3_0603	SpyM3_0604		clpX	FALSE	0.209	130.000	0.012	NA		NA
269306	269307	SpyM3_0604	SpyM3_0605	clpX		TRUE	0.861	10.000	0.043	1.000		NA
269307	269308	SpyM3_0605	SpyM3_0606			FALSE	0.162	148.000	0.004	NA		NA
269310	269311	SpyM3_0608	SpyM3_0609	rpiA	deoB	TRUE	0.697	77.000	0.018	1.000	Y	NA
269311	269312	SpyM3_0609	SpyM3_0610	deoB	arsC	TRUE	0.812	19.000	0.108	1.000	N	NA
269312	269313	SpyM3_0610	SpyM3_0611	arsC	punA	TRUE	0.931	-16.000	0.108	1.000	N	NA
269313	269314	SpyM3_0611	SpyM3_0612	punA	deoD2	FALSE	0.266	771.000	0.040	0.001	Y	NA
269314	269315	SpyM3_0612	SpyM3_0613	deoD2		FALSE	0.318	128.000	0.107	NA		NA
269317	269318	SpyM3_0615	SpyM3_0616		pyrF	FALSE	0.056	277.000	0.000	NA		NA
269318	269319	SpyM3_0616	SpyM3_0617	pyrF	pyrE	TRUE	0.863	58.000	0.133	1.000	Y	NA
269319	269320	SpyM3_0617	SpyM3_0618	pyrE	amiC	FALSE	0.041	197.000	0.000	1.000	N	NA
269320	269321	SpyM3_0618	SpyM3_0619	amiC		FALSE	0.337	118.000	0.182	1.000	N	NA
269321	269322	SpyM3_0619	SpyM3_0620			TRUE	0.973	29.000	0.125	0.037	Y	NA
269322	269323	SpyM3_0620	SpyM3_0621		ung	FALSE	0.120	133.000	0.025	1.000	N	NA
269323	269324	SpyM3_0621	SpyM3_0622	ung	pyrC	FALSE	0.098	132.000	0.009	1.000	N	NA
269326	269327	SpyM3_0624	SpyM3_0625	parE	parC	TRUE	0.973	91.000	0.552	0.003	Y	NA
269327	269328	SpyM3_0625	SpyM3_0626	parC	bcaT	FALSE	0.218	120.000	0.086	1.000	N	NA
269328	269329	SpyM3_0626	SpyM3_0627	bcaT		TRUE	0.714	64.000	0.095	NA		NA
269329	400254	SpyM3_0627	SpyM3_t46		tRNA-Tyr	TRUE	0.557	61.000	0.000	NA		NA
400254	400255	SpyM3_t46	SpyM3_t47	tRNA-Tyr	tRNA-Gln	TRUE	0.471	73.000	0.000	NA		NA
400255	269330	SpyM3_t47	SpyM3_0628	tRNA-Gln		FALSE	0.185	124.000	0.000	NA		NA
269330	400256	SpyM3_0628	SpyM3_t48		tRNA-Arg	FALSE	0.232	113.000	0.000	NA		NA
269332	269333	SpyM3_0630	SpyM3_0631			FALSE	0.044	311.000	0.000	NA		NA
269333	269334	SpyM3_0631	SpyM3_0632			TRUE	0.650	59.000	0.056	1.000		NA
269336	269337	SpyM3_0634	SpyM3_0635	miaA	hflX	FALSE	0.155	154.000	0.027	1.000		NA
269337	269338	SpyM3_0635	SpyM3_0636	hflX		TRUE	0.916	-7.000	0.014	1.000		NA
269338	269339	SpyM3_0636	SpyM3_0637			TRUE	0.812	15.000	0.022	1.000		NA
269339	269340	SpyM3_0637	SpyM3_0638			TRUE	0.923	0.000	0.074	1.000		NA
269340	269341	SpyM3_0638	SpyM3_0639		recJ	TRUE	0.909	-3.000	0.016	1.000		NA
269341	269342	SpyM3_0639	SpyM3_0640	recJ	apt	FALSE	0.184	150.000	0.128	1.000	N	NA
269342	269343	SpyM3_0640	SpyM3_0641	apt		FALSE	0.323	81.000	0.005	NA	N	NA
269343	269344	SpyM3_0641	SpyM3_0642		nth	TRUE	0.965	-3.000	0.007	NA	Y	NA
269344	269345	SpyM3_0642	SpyM3_0643	nth		TRUE	0.531	72.000	0.006	NA		NA
269345	269346	SpyM3_0643	SpyM3_0644			TRUE	0.981	-10.000	0.283	NA		NA
269346	269347	SpyM3_0644	SpyM3_0645			TRUE	0.754	40.000	0.021	NA		NA
269347	269348	SpyM3_0645	SpyM3_0646		rmlA	TRUE	0.560	58.000	0.059	1.000	N	NA
269348	269349	SpyM3_0646	SpyM3_0647	rmlA	rmlC	TRUE	0.974	0.000	0.149	1.000	Y	NA
269349	269350	SpyM3_0647	SpyM3_0648	rmlC	rmlB	TRUE	0.443	244.000	0.350	1.000	Y	NA
269350	269351	SpyM3_0648	SpyM3_0649	rmlB	mutX	FALSE	0.033	221.000	0.000	1.000	N	NA
269351	269352	SpyM3_0649	SpyM3_0650	mutX		TRUE	0.730	58.000	0.074	NA		NA
269352	269353	SpyM3_0650	SpyM3_0651			TRUE	0.983	-10.000	0.324	NA		NA
269355	269356	SpyM3_0653	SpyM3_0654			TRUE	0.913	-49.000	0.000	NA		NA
269356	269357	SpyM3_0654	SpyM3_0655			FALSE	0.117	176.000	0.000	NA		NA
269357	269358	SpyM3_0655	SpyM3_0656			TRUE	0.994	-3.000	0.895	1.000		NA
269358	269359	SpyM3_0656	SpyM3_0657			FALSE	0.113	204.000	0.026	1.000		NA
269359	269360	SpyM3_0657	SpyM3_0658		estA	FALSE	0.336	133.000	0.143	NA		NA
269360	269361	SpyM3_0658	SpyM3_0659	estA		TRUE	0.878	30.000	0.150	NA		NA
269361	269362	SpyM3_0659	SpyM3_0660			TRUE	0.735	46.000	0.029	NA		NA
269362	269363	SpyM3_0660	SpyM3_0661		acoA	FALSE	0.041	285.000	0.000	1.000		NA
269363	269364	SpyM3_0661	SpyM3_0662	acoA	acoB	TRUE	0.994	56.000	0.769	0.001	Y	NA
269364	269365	SpyM3_0662	SpyM3_0663	acoB	acoC	TRUE	0.571	185.000	0.077	0.048	Y	NA
269365	269366	SpyM3_0663	SpyM3_0664	acoC	acoL	FALSE	0.085	331.000	0.000	1.000	Y	NA
269369	269370	SpyM3_0667	SpyM3_0668	cobQ	murC	TRUE	0.991	0.000	0.796	1.000		NA
269371	269372	SpyM3_0669	SpyM3_0670			TRUE	0.989	-3.000	0.502	NA		NA
269372	269373	SpyM3_0670	SpyM3_0671			FALSE	0.203	219.000	0.150	NA		NA
269373	269374	SpyM3_0671	SpyM3_0672			FALSE	0.205	124.000	0.003	NA		NA
269374	269375	SpyM3_0672	SpyM3_0673		hemN	TRUE	0.939	-33.000	0.021	NA		NA
269375	269376	SpyM3_0673	SpyM3_0674	hemN		TRUE	0.816	10.000	0.060	1.000	N	NA
269376	269377	SpyM3_0674	SpyM3_0675			TRUE	0.869	0.000	0.055	1.000	N	NA
269377	269378	SpyM3_0675	SpyM3_0676			TRUE	0.976	0.000	0.330	NA		NA
269378	269379	SpyM3_0676	SpyM3_0677			FALSE	0.052	287.000	0.000	NA		NA
269379	269380	SpyM3_0677	SpyM3_0678			TRUE	0.987	0.000	0.546	NA		NA
269380	269381	SpyM3_0678	SpyM3_0679			TRUE	0.988	12.000	0.876	NA		NA
269381	269382	SpyM3_0679	SpyM3_0680			TRUE	0.979	-10.000	0.253	NA		NA
269383	269384	SpyM3_0681	SpyM3_0682			FALSE	0.124	311.000	0.000	0.061		NA
269384	269385	SpyM3_0682	SpyM3_0683			TRUE	0.816	11.000	0.000	NA		NA
269385	269386	SpyM3_0683	SpyM3_0684			TRUE	0.847	4.000	0.000	NA		NA
269387	269388	SpyM3_0685	SpyM3_0686			TRUE	0.697	35.000	0.000	NA		NA
269388	269389	SpyM3_0686	SpyM3_0687			FALSE	0.019	879.000	0.000	NA		NA
269389	269390	SpyM3_0687	SpyM3_0688			TRUE	0.857	74.000	0.400	NA		NA
269390	269391	SpyM3_0688	SpyM3_0689			FALSE	0.324	93.000	0.000	NA		NA
269391	269392	SpyM3_0689	SpyM3_0690			FALSE	0.050	296.000	0.000	NA		NA
269392	269393	SpyM3_0690	SpyM3_0691			TRUE	0.910	-7.000	0.000	NA		NA
269393	269394	SpyM3_0691	SpyM3_0692			FALSE	0.045	309.000	0.000	NA		NA
269394	269395	SpyM3_0692	SpyM3_0693			TRUE	0.881	0.000	0.000	NA		NA
269395	269396	SpyM3_0693	SpyM3_0694			TRUE	0.793	14.000	0.000	NA		NA
269396	269397	SpyM3_0694	SpyM3_0695			TRUE	0.979	17.000	0.667	NA		NA
269397	269398	SpyM3_0695	SpyM3_0696			TRUE	0.900	-3.000	0.000	NA		NA
269398	269399	SpyM3_0696	SpyM3_0697			TRUE	0.861	2.000	0.000	NA		NA
269399	269400	SpyM3_0697	SpyM3_0698			TRUE	0.842	5.000	0.000	NA		NA
269400	269401	SpyM3_0698	SpyM3_0699			TRUE	0.914	-34.000	0.000	NA		NA
269401	269402	SpyM3_0699	SpyM3_0700			TRUE	0.787	15.000	0.000	NA		NA
269402	269403	SpyM3_0700	SpyM3_0701			TRUE	0.900	-3.000	0.000	NA		NA
269403	269404	SpyM3_0701	SpyM3_0702			TRUE	0.861	2.000	0.000	NA		NA
269404	269405	SpyM3_0702	SpyM3_0703			FALSE	0.276	102.000	0.000	NA		NA
269405	269406	SpyM3_0703	SpyM3_0704			FALSE	0.100	160.000	0.000	1.000		NA
269406	269407	SpyM3_0704	SpyM3_0705			FALSE	0.133	154.000	0.000	NA		NA
269407	269408	SpyM3_0705	SpyM3_0706			TRUE	0.576	58.000	0.000	NA		NA
269408	269409	SpyM3_0706	SpyM3_0707			TRUE	0.739	26.000	0.000	NA		NA
269409	269410	SpyM3_0707	SpyM3_0708			TRUE	0.739	26.000	0.000	NA		NA
269410	269411	SpyM3_0708	SpyM3_0709			TRUE	0.484	141.000	0.312	NA		NA
269411	269412	SpyM3_0709	SpyM3_0710			TRUE	0.964	13.000	0.385	NA		NA
269412	269413	SpyM3_0710	SpyM3_0711			FALSE	0.033	368.000	0.000	NA		NA
269413	269414	SpyM3_0711	SpyM3_0712			TRUE	0.914	-19.000	0.000	NA		NA
269414	269415	SpyM3_0712	SpyM3_0713			TRUE	0.780	17.000	0.000	NA		NA
269415	269416	SpyM3_0713	SpyM3_0714			TRUE	0.793	14.000	0.000	NA		NA
269416	269417	SpyM3_0714	SpyM3_0715			TRUE	0.881	0.000	0.000	NA		NA
269417	269418	SpyM3_0715	SpyM3_0716			TRUE	0.910	-7.000	0.000	NA		NA
269418	269419	SpyM3_0716	SpyM3_0717			TRUE	0.976	2.000	0.375	NA		NA
269419	269420	SpyM3_0717	SpyM3_0718			TRUE	0.988	-7.000	0.444	NA		NA
269420	269421	SpyM3_0718	SpyM3_0719			TRUE	0.980	12.000	0.615	NA		NA
269421	269422	SpyM3_0719	SpyM3_0720			TRUE	0.662	93.000	0.231	NA		NA
269424	269425	SpyM3_0722	SpyM3_0723			TRUE	0.752	13.000	0.000	1.000		NA
269425	269426	SpyM3_0723	SpyM3_0724			TRUE	0.900	-3.000	0.000	NA		NA
269426	269427	SpyM3_0724	SpyM3_0725		hylP.1	TRUE	0.900	-3.000	0.000	NA		NA
269427	269428	SpyM3_0725	SpyM3_0726	hylP.1		TRUE	0.825	10.000	0.000	NA		NA
269428	269429	SpyM3_0726	SpyM3_0727			TRUE	0.809	12.000	0.000	NA		NA
269429	269430	SpyM3_0727	SpyM3_0728			TRUE	0.853	3.000	0.000	NA		NA
269430	269431	SpyM3_0728	SpyM3_0729			TRUE	0.809	12.000	0.000	NA		NA
269431	269432	SpyM3_0729	SpyM3_0730			TRUE	0.900	-3.000	0.000	NA		NA
269432	269433	SpyM3_0730	SpyM3_0731			FALSE	0.218	116.000	0.000	NA		NA
269434	269435	SpyM3_0732	SpyM3_0733			TRUE	0.576	58.000	0.000	NA		NA
269435	269436	SpyM3_0733	SpyM3_0734			FALSE	0.061	264.000	0.000	NA		NA
269436	269437	SpyM3_0734	SpyM3_0735			FALSE	0.148	141.000	0.000	NA		NA
269438	269439	SpyM3_0736	SpyM3_0737		lepA	FALSE	0.014	1134.000	0.000	1.000		NA
269439	269440	SpyM3_0737	SpyM3_0738	lepA	sclB	FALSE	0.084	187.000	0.000	1.000		NA
269440	269441	SpyM3_0738	SpyM3_0739	sclB	csrA	FALSE	0.105	153.000	0.000	1.000		NA
269441	269442	SpyM3_0739	SpyM3_0740	csrA		FALSE	0.131	130.000	0.000	1.000		NA
269442	269443	SpyM3_0740	SpyM3_0741			FALSE	0.073	207.000	0.000	1.000		NA
269443	269444	SpyM3_0741	SpyM3_0742			TRUE	0.996	27.000	0.786	0.020	Y	NA
269444	269445	SpyM3_0742	SpyM3_0743			TRUE	0.933	146.000	0.778	0.024	Y	NA
269445	269446	SpyM3_0743	SpyM3_0744			TRUE	0.999	-3.000	0.778	0.024	Y	NA
269446	269447	SpyM3_0744	SpyM3_0745			TRUE	0.562	136.000	0.222	0.060	N	NA
269447	269448	SpyM3_0745	SpyM3_0746			TRUE	0.997	4.000	0.500	0.012	Y	NA
269448	269449	SpyM3_0746	SpyM3_0747			TRUE	0.986	-6.000	0.571	1.000	N	NA
269449	269450	SpyM3_0747	SpyM3_0748			FALSE	0.103	113.000	0.000	1.000	N	NA
269450	269451	SpyM3_0748	SpyM3_0749		uvrC	FALSE	0.071	130.000	0.000	1.000	N	NA
269451	269452	SpyM3_0749	SpyM3_0750	uvrC		FALSE	0.058	184.000	0.004	1.000	N	NA
269452	269453	SpyM3_0750	SpyM3_0751			FALSE	0.295	125.000	0.179	1.000	N	NA
269455	269456	SpyM3_0753	SpyM3_0754	rplJ	rplL	TRUE	0.991	65.000	0.884	0.027	Y	NA
269456	269457	SpyM3_0754	SpyM3_0755	rplL		FALSE	0.032	227.000	0.000	1.000	N	NA
269459	269460	SpyM3_0757	SpyM3_0758		folC.1	FALSE	0.343	90.000	0.000	NA		NA
269460	269461	SpyM3_0758	SpyM3_0759	folC.1	folE	TRUE	0.925	17.000	0.057	1.000	Y	NA
269461	269462	SpyM3_0759	SpyM3_0760	folE	folP	TRUE	0.949	9.000	0.073	1.000	Y	NA
269462	269463	SpyM3_0760	SpyM3_0761	folP	folQ	TRUE	0.954	7.000	0.094	1.000	Y	NA
269463	269464	SpyM3_0761	SpyM3_0762	folQ	folK	TRUE	0.977	-3.000	0.142	1.000	Y	NA
269464	269465	SpyM3_0762	SpyM3_0763	folK	murB	FALSE	0.077	162.000	0.010	1.000	N	NA
269465	269466	SpyM3_0763	SpyM3_0764	murB	potA	TRUE	0.597	46.000	0.041	1.000	N	NA
269466	269467	SpyM3_0764	SpyM3_0765	potA	potB	TRUE	0.999	-16.000	0.928	0.036	Y	NA
269467	269468	SpyM3_0765	SpyM3_0766	potB	potC	TRUE	0.997	-3.000	0.492	0.036	Y	NA
269468	269469	SpyM3_0766	SpyM3_0767	potC	potD	TRUE	0.996	-7.000	0.253	0.036	Y	NA
269470	269471	SpyM3_0768	SpyM3_0769			TRUE	0.959	-19.000	0.000	1.000	Y	NA
269472	269473	SpyM3_0770	SpyM3_0771	malP		TRUE	0.970	31.000	0.432	1.000	Y	NA
269475	269476	SpyM3_0773	SpyM3_0774			FALSE	0.089	178.000	0.000	1.000		NA
269476	269477	SpyM3_0774	SpyM3_0775			FALSE	0.128	163.000	0.071	1.000	N	NA
269477	269478	SpyM3_0775	SpyM3_0776			FALSE	0.200	180.000	0.071	NA		NA
269478	269479	SpyM3_0776	SpyM3_0777		radC	TRUE	0.400	100.000	0.046	NA		NA
269480	269481	SpyM3_0778	SpyM3_0779			TRUE	0.983	10.000	0.714	1.000		NA
269481	269482	SpyM3_0779	SpyM3_0780			FALSE	0.129	252.000	0.083	NA		NA
269482	269483	SpyM3_0780	SpyM3_0781			TRUE	0.969	-10.000	0.166	NA		NA
269483	269484	SpyM3_0781	SpyM3_0782		prs	TRUE	0.973	-3.000	0.089	1.000	Y	NA
269484	269485	SpyM3_0782	SpyM3_0783	prs		FALSE	0.284	140.000	0.145	1.000		NA
269486	269487	SpyM3_0784	SpyM3_0785			TRUE	0.993	-25.000	0.725	1.000		NA
269487	269488	SpyM3_0785	SpyM3_0786		rluD	TRUE	0.935	-3.000	0.150	1.000	N	NA
269488	269489	SpyM3_0786	SpyM3_0787	rluD	eutD	TRUE	0.847	4.000	0.067	1.000	N	NA
269489	269490	SpyM3_0787	SpyM3_0788	eutD		TRUE	0.483	127.000	0.031	0.046		NA
269490	269491	SpyM3_0788	SpyM3_0789			TRUE	0.979	-3.000	0.018	0.023		NA
269493	269494	SpyM3_0791	SpyM3_0792			TRUE	0.977	-7.000	0.382	1.000	N	NA
269494	269495	SpyM3_0792	SpyM3_0793			FALSE	0.022	278.000	0.000	1.000	N	NA
269495	269496	SpyM3_0793	SpyM3_0794		xpt	FALSE	0.115	305.000	0.009	1.000	Y	NA
269496	269497	SpyM3_0794	SpyM3_0795	xpt		TRUE	0.960	0.000	0.046	1.000	Y	NA
269498	269499	SpyM3_0796	SpyM3_0797			TRUE	0.814	53.000	0.189	1.000		NA
269500	269501	SpyM3_0798	SpyM3_0799	tdk	prfA	TRUE	0.687	35.000	0.062	1.000	N	NA
269501	269502	SpyM3_0799	SpyM3_0800	prfA	hemK	TRUE	0.967	0.000	0.084	1.000	Y	NA
269502	269503	SpyM3_0800	SpyM3_0801	hemK		TRUE	0.975	-16.000	0.029	NA	Y	NA
269503	269504	SpyM3_0801	SpyM3_0802			TRUE	0.824	18.000	0.012	NA		NA
269504	269505	SpyM3_0802	SpyM3_0803			TRUE	0.938	-10.000	0.056	1.000		NA
269505	269506	SpyM3_0803	SpyM3_0804			TRUE	0.836	7.000	0.000	NA		NA
269506	269507	SpyM3_0804	SpyM3_0805			TRUE	0.869	1.000	0.000	NA		NA
269507	269508	SpyM3_0805	SpyM3_0806			FALSE	0.259	125.000	0.035	NA		NA
269508	269509	SpyM3_0806	SpyM3_0807			TRUE	0.999	-3.000	0.895	0.008	Y	NA
269509	269510	SpyM3_0807	SpyM3_0808		nox.1	FALSE	0.056	241.000	0.000	1.000		NA
269512	269513	SpyM3_0810	SpyM3_0811	gyrA		TRUE	0.739	20.000	0.013	NA	N	NA
269513	269514	SpyM3_0811	SpyM3_0812			FALSE	0.387	83.000	0.039	NA	N	NA
269514	269515	SpyM3_0812	SpyM3_0813			FALSE	0.022	614.000	0.000	NA		NA
269516	269517	SpyM3_0814	SpyM3_0815		hlyIII	FALSE	0.363	117.000	0.135	1.000		NA
269517	269518	SpyM3_0815	SpyM3_0816	hlyIII		TRUE	0.953	-3.000	0.146	1.000		NA
269519	269520	SpyM3_0817	SpyM3_0818		rnh	TRUE	0.960	-10.000	0.148	1.000		NA
269520	269521	SpyM3_0818	SpyM3_0819	rnh	smf	TRUE	0.777	65.000	0.037	1.000	Y	NA
269521	269522	SpyM3_0819	SpyM3_0820	smf	topA	TRUE	0.717	106.000	0.238	1.000	Y	NA
269522	269523	SpyM3_0820	SpyM3_0821	topA	gid	TRUE	0.929	-3.000	0.137	1.000	N	NA
269523	269524	SpyM3_0821	SpyM3_0822	gid		FALSE	0.073	153.000	0.005	1.000	N	NA
269524	269525	SpyM3_0822	SpyM3_0823			TRUE	0.897	43.000	0.250	NA		NA
269525	269526	SpyM3_0823	SpyM3_0824			TRUE	0.985	0.000	0.500	NA		NA
269526	269527	SpyM3_0824	SpyM3_0825			TRUE	0.819	10.000	0.062	1.000	N	NA
269528	269529	SpyM3_0826	SpyM3_0827	citG		TRUE	0.990	-7.000	0.700	1.000	N	NA
269529	269530	SpyM3_0827	SpyM3_0828			TRUE	0.399	158.000	0.400	1.000	N	NA
269531	269532	SpyM3_0829	SpyM3_0830			TRUE	0.750	54.000	0.077	NA		NA
269532	269533	SpyM3_0830	SpyM3_0831			FALSE	0.350	96.000	0.103	1.000	N	NA
269533	269534	SpyM3_0831	SpyM3_0832		citD	FALSE	0.209	188.000	0.000	1.000	Y	NA
269534	269535	SpyM3_0832	SpyM3_0833	citD	citE	TRUE	0.994	-12.000	0.284	0.002	N	NA
269535	269536	SpyM3_0833	SpyM3_0834	citE	citF	TRUE	0.982	3.000	0.119	0.001	N	NA
269536	269537	SpyM3_0834	SpyM3_0835	citF	citX	TRUE	0.937	-7.000	0.138	1.000	N	NA
269537	269538	SpyM3_0835	SpyM3_0836	citX	oadA	TRUE	0.833	15.000	0.123	1.000	N	NA
269539	269540	SpyM3_0837	SpyM3_0838	citC		FALSE	0.288	89.000	0.000	1.000		NA
269540	269541	SpyM3_0838	SpyM3_0839			FALSE	0.015	701.000	0.000	1.000		NA
269543	269544	SpyM3_0841	SpyM3_0842	ffh	ylxM	TRUE	0.896	15.000	0.151	1.000		NA
269544	269545	SpyM3_0842	SpyM3_0843	ylxM		TRUE	0.709	89.000	0.032	0.042		NA
269545	269546	SpyM3_0843	SpyM3_0844			TRUE	0.517	83.000	0.057	NA		NA
269548	269549	SpyM3_0846	SpyM3_0847	murM.2		FALSE	0.026	365.000	0.000	1.000		NA
269549	269550	SpyM3_0847	SpyM3_0848			FALSE	0.233	134.000	0.040	NA		NA
269550	269551	SpyM3_0848	SpyM3_0849		pdxK	TRUE	0.965	-22.000	0.142	NA		NA
269553	269554	SpyM3_0851	SpyM3_0852			FALSE	0.030	339.000	0.000	1.000		NA
269554	269555	SpyM3_0852	SpyM3_0853		fhs.1	TRUE	0.402	85.000	0.094	1.000	N	NA
269555	269556	SpyM3_0853	SpyM3_0854	fhs.1	lplA	FALSE	0.306	128.000	0.200	1.000	N	NA
269556	269557	SpyM3_0854	SpyM3_0855	lplA		TRUE	0.850	47.000	0.250	NA	N	NA
269557	269558	SpyM3_0855	SpyM3_0856			TRUE	0.674	98.000	0.286	NA		NA
269558	269559	SpyM3_0856	SpyM3_0857			TRUE	0.874	23.000	0.107	NA		NA
269559	269560	SpyM3_0857	SpyM3_0858			TRUE	0.943	42.000	0.571	NA	N	NA
269560	269561	SpyM3_0858	SpyM3_0859			TRUE	0.978	-3.000	0.100	NA	Y	NA
269561	269562	SpyM3_0859	SpyM3_0860			TRUE	0.860	-3.000	0.019	1.000	N	NA
269563	269564	SpyM3_0861	SpyM3_0862	dpfB	dfp	TRUE	0.897	-7.000	0.002	1.000		NA
269564	269565	SpyM3_0862	SpyM3_0863	dfp		TRUE	0.664	58.000	0.019	NA		NA
269565	269566	SpyM3_0863	SpyM3_0864		pgmA	FALSE	0.225	176.000	0.098	NA		NA
269567	269568	SpyM3_0865	SpyM3_0866			TRUE	0.871	134.000	0.720	0.036		NA
269568	269569	SpyM3_0866	SpyM3_0867			TRUE	0.986	-7.000	0.438	1.000		NA
269569	269570	SpyM3_0867	SpyM3_0868			FALSE	0.185	139.000	0.036	1.000		NA
269570	269571	SpyM3_0868	SpyM3_0869		cdd	TRUE	0.673	94.000	0.300	1.000		NA
269571	269572	SpyM3_0869	SpyM3_0870	cdd		FALSE	0.008	660.000	0.000	1.000	N	NA
269573	269574	SpyM3_0871	SpyM3_0872	coaA	rpsT	FALSE	0.387	69.000	0.014	1.000	N	NA
269575	269576	SpyM3_0873	SpyM3_0874	ciaH	ciaR	TRUE	0.995	-7.000	0.606	1.000	Y	NA
269576	269577	SpyM3_0874	SpyM3_0875	ciaR	pepN	FALSE	0.036	347.000	0.061	1.000	N	NA
269577	269578	SpyM3_0875	SpyM3_0876	pepN	phoU	FALSE	0.120	205.000	0.067	NA	N	NA
269578	269579	SpyM3_0876	SpyM3_0877	phoU	pstB	TRUE	0.936	68.000	0.413	NA	Y	NA
269579	269580	SpyM3_0877	SpyM3_0878	pstB	pstB2	TRUE	0.997	10.000	0.542	0.001	Y	NA
269580	269581	SpyM3_0878	SpyM3_0879	pstB2	pstC	TRUE	0.995	16.000	0.490	0.003	Y	NA
269581	269582	SpyM3_0879	SpyM3_0880	pstC	pstC2	TRUE	0.999	-10.000	0.907	0.003	Y	NA
269582	269583	SpyM3_0880	SpyM3_0881	pstC2	pstS	TRUE	0.967	11.000	0.206	1.000	Y	NA
269583	269584	SpyM3_0881	SpyM3_0882	pstS		TRUE	0.410	139.000	0.303	NA	N	NA
269584	269585	SpyM3_0882	SpyM3_0883			TRUE	0.939	6.000	0.229	NA	N	NA
269585	269586	SpyM3_0883	SpyM3_0884			TRUE	0.984	-10.000	0.337	NA		NA
269586	269587	SpyM3_0884	SpyM3_0885			TRUE	0.951	2.000	0.169	NA		NA
269587	269588	SpyM3_0885	SpyM3_0886		mreA	TRUE	0.568	43.000	0.017	1.000	N	NA
269588	269589	SpyM3_0886	SpyM3_0887	mreA	truB	TRUE	0.899	29.000	0.308	1.000	N	NA
269589	269590	SpyM3_0887	SpyM3_0888	truB		FALSE	0.278	116.000	0.014	NA		NA
269590	269591	SpyM3_0888	SpyM3_0889			TRUE	0.418	97.000	0.045	NA		NA
269591	269592	SpyM3_0889	SpyM3_0890			TRUE	0.881	11.000	0.045	NA		NA
269592	269593	SpyM3_0890	SpyM3_0891			TRUE	0.495	92.000	0.121	1.000		NA
269593	269594	SpyM3_0891	SpyM3_0892			TRUE	0.980	15.000	0.438	1.000	Y	NA
269596	269597	SpyM3_0894	SpyM3_0895			FALSE	0.377	163.000	0.238	NA		NA
269597	269598	SpyM3_0895	SpyM3_0896			TRUE	0.981	11.000	0.600	NA		NA
269598	269599	SpyM3_0896	SpyM3_0897			TRUE	0.959	41.000	0.600	NA		NA
269599	269600	SpyM3_0897	SpyM3_0898			TRUE	0.879	13.000	0.060	NA		NA
269600	269601	SpyM3_0898	SpyM3_0899			TRUE	0.922	11.000	0.143	NA		NA
269601	269602	SpyM3_0899	SpyM3_0900			TRUE	0.887	61.000	0.357	NA		NA
269602	269603	SpyM3_0900	SpyM3_0901		pcrA	FALSE	0.027	363.000	0.000	1.000		NA
269603	269604	SpyM3_0901	SpyM3_0902	pcrA		FALSE	0.033	369.000	0.000	NA		NA
269605	269606	SpyM3_0903	SpyM3_0904			TRUE	0.460	120.000	0.060	0.072	N	NA
269607	269608	SpyM3_0905	SpyM3_0906	cfa		FALSE	0.032	370.000	0.000	NA		NA
269608	269609	SpyM3_0906	SpyM3_0907			TRUE	0.949	16.000	0.154	1.000	Y	NA
269609	269610	SpyM3_0907	SpyM3_0908			TRUE	0.956	10.000	0.130	1.000	Y	NA
269610	269611	SpyM3_0908	SpyM3_0909			FALSE	0.186	107.000	0.018	1.000	N	NA
269611	269612	SpyM3_0909	SpyM3_0910		glmS	FALSE	0.058	196.000	0.008	1.000	N	NA
269612	269613	SpyM3_0910	SpyM3_0911	glmS	sipC	FALSE	0.048	227.000	0.011	1.000	N	NA
269613	269614	SpyM3_0911	SpyM3_0912	sipC	pyk	FALSE	0.088	218.000	0.072	1.000	N	NA
269614	269615	SpyM3_0912	SpyM3_0913	pyk	pfk	TRUE	0.974	63.000	0.261	0.006	Y	NA
269615	269616	SpyM3_0913	SpyM3_0914	pfk	dnaE	TRUE	0.459	80.000	0.098	1.000	N	NA
269617	269618	SpyM3_0915	SpyM3_0916			TRUE	0.972	0.000	0.412	1.000	N	NA
269618	269619	SpyM3_0916	SpyM3_0917			TRUE	0.975	10.000	0.471	NA		NA
269621	269622	SpyM3_0919	SpyM3_0920		ssa	FALSE	0.232	113.000	0.000	NA		NA
269622	269623	SpyM3_0920	SpyM3_0921	ssa		FALSE	0.068	213.000	0.000	1.000		NA
269623	269624	SpyM3_0921	SpyM3_0922			FALSE	0.120	138.000	0.000	1.000		NA
269624	269625	SpyM3_0922	SpyM3_0923			FALSE	0.218	116.000	0.000	NA		NA
269625	269626	SpyM3_0923	SpyM3_0924			TRUE	0.900	-3.000	0.000	NA		NA
269626	269627	SpyM3_0924	SpyM3_0925			TRUE	0.825	10.000	0.000	NA		NA
269627	269628	SpyM3_0925	SpyM3_0926			TRUE	0.853	3.000	0.000	NA		NA
269628	269629	SpyM3_0926	SpyM3_0927			TRUE	0.809	12.000	0.000	NA		NA
269629	269630	SpyM3_0927	SpyM3_0928			TRUE	0.923	85.000	1.000	1.000		NA
269630	269631	SpyM3_0928	SpyM3_0929		hylP.2	TRUE	0.921	40.000	0.000	0.004		NA
269631	269632	SpyM3_0929	SpyM3_0930	hylP.2		TRUE	0.900	-3.000	0.000	NA		NA
269632	269633	SpyM3_0930	SpyM3_0931			FALSE	0.338	165.000	0.200	NA		NA
269633	269634	SpyM3_0931	SpyM3_0932			TRUE	0.990	0.000	0.667	NA		NA
269634	269635	SpyM3_0932	SpyM3_0933			TRUE	0.981	13.000	0.667	NA		NA
269635	269636	SpyM3_0933	SpyM3_0934			TRUE	0.984	30.000	1.000	NA		NA
269636	269637	SpyM3_0934	SpyM3_0935			TRUE	0.900	53.000	0.333	NA		NA
269637	269638	SpyM3_0935	SpyM3_0936			TRUE	0.978	19.000	0.667	NA		NA
269638	269639	SpyM3_0936	SpyM3_0937			TRUE	0.975	-3.000	0.250	NA		NA
269639	269640	SpyM3_0937	SpyM3_0938			TRUE	0.961	-3.000	0.150	NA		NA
269640	269641	SpyM3_0938	SpyM3_0939			TRUE	0.978	-3.000	0.286	NA		NA
269641	269642	SpyM3_0939	SpyM3_0940			TRUE	0.853	3.000	0.000	NA		NA
269642	269643	SpyM3_0940	SpyM3_0941			TRUE	0.793	14.000	0.000	NA		NA
269643	269644	SpyM3_0941	SpyM3_0942		clpP.2	TRUE	0.820	26.000	0.038	NA		NA
269644	269645	SpyM3_0942	SpyM3_0943	clpP.2		TRUE	0.945	-22.000	0.038	NA		NA
269645	269646	SpyM3_0943	SpyM3_0944			TRUE	0.703	34.000	0.000	NA		NA
269646	269647	SpyM3_0944	SpyM3_0945			TRUE	0.910	-7.000	0.000	NA		NA
269647	269648	SpyM3_0945	SpyM3_0946			TRUE	0.984	-3.000	0.400	NA		NA
269648	269649	SpyM3_0946	SpyM3_0947			TRUE	0.946	15.000	0.278	NA		NA
269649	269650	SpyM3_0947	SpyM3_0948			FALSE	0.240	172.000	0.111	NA		NA
269650	269651	SpyM3_0948	SpyM3_0949			TRUE	0.900	-3.000	0.000	NA		NA
269651	269652	SpyM3_0949	SpyM3_0950			FALSE	0.054	284.000	0.000	NA		NA
269652	269653	SpyM3_0950	SpyM3_0951			FALSE	0.057	273.000	0.000	NA		NA
269653	269654	SpyM3_0951	SpyM3_0952			TRUE	0.881	0.000	0.000	NA		NA
269654	269655	SpyM3_0952	SpyM3_0953			FALSE	0.105	191.000	0.000	NA		NA
269655	269656	SpyM3_0953	SpyM3_0954			FALSE	0.047	306.000	0.000	NA		NA
269656	269657	SpyM3_0954	SpyM3_0955			TRUE	0.914	-16.000	0.000	NA		NA
269657	269658	SpyM3_0955	SpyM3_0956			TRUE	0.900	-3.000	0.000	NA		NA
269658	269659	SpyM3_0956	SpyM3_0957			FALSE	0.062	262.000	0.000	NA		NA
269659	269660	SpyM3_0957	SpyM3_0958			TRUE	0.630	48.000	0.000	NA		NA
269660	269661	SpyM3_0958	SpyM3_0959			TRUE	0.970	-10.000	0.167	NA		NA
269661	269662	SpyM3_0959	SpyM3_0960			TRUE	0.904	12.000	0.100	NA		NA
269662	269663	SpyM3_0960	SpyM3_0961			TRUE	0.782	16.000	0.000	NA		NA
269663	269664	SpyM3_0961	SpyM3_0962			FALSE	0.276	102.000	0.000	NA		NA
269664	269665	SpyM3_0962	SpyM3_0963			TRUE	0.970	1.000	0.286	NA		NA
269665	269666	SpyM3_0963	SpyM3_0964			FALSE	0.077	229.000	0.000	NA		NA
269666	269667	SpyM3_0964	SpyM3_0965			TRUE	0.782	16.000	0.000	NA		NA
269667	269668	SpyM3_0965	SpyM3_0966			TRUE	0.900	-3.000	0.000	NA		NA
269668	269669	SpyM3_0966	SpyM3_0967			FALSE	0.367	78.000	0.000	1.000		NA
269670	269671	SpyM3_0968	SpyM3_0969			FALSE	0.138	151.000	0.000	NA		NA
269672	269673	SpyM3_0970	SpyM3_0971			TRUE	0.809	12.000	0.000	NA		NA
269677	269678	SpyM3_0975	SpyM3_0976			TRUE	0.703	34.000	0.000	NA		NA
269679	269680	SpyM3_0977	SpyM3_0978		intP	FALSE	0.011	435.000	0.000	1.000	N	NA
269680	269681	SpyM3_0978	SpyM3_0979	intP		FALSE	0.035	363.000	0.000	NA		NA
269682	269683	SpyM3_0980	SpyM3_0981	glgP	malQ	TRUE	0.985	35.000	0.289	0.021	Y	NA
269683	269684	SpyM3_0981	SpyM3_0982	malQ	malR	TRUE	0.650	115.000	0.538	1.000	N	NA
269685	269686	SpyM3_0983	SpyM3_0984	malE	malF	TRUE	0.795	274.000	0.690	0.034	Y	NA
269686	269687	SpyM3_0984	SpyM3_0985	malF	malG	TRUE	0.998	0.000	0.793	0.034	Y	NA
269689	269690	SpyM3_0987	SpyM3_0988			TRUE	0.913	-58.000	0.000	NA		NA
269691	269692	SpyM3_0989	SpyM3_0990			FALSE	0.034	367.000	0.000	NA		NA
269692	269693	SpyM3_0990	SpyM3_0991		dltD	TRUE	0.731	31.000	0.042	NA	N	NA
269693	269694	SpyM3_0991	SpyM3_0992	dltD	dltC	TRUE	0.986	-7.000	0.409	NA		NA
269694	269695	SpyM3_0992	SpyM3_0993	dltC	dltB	TRUE	0.960	18.000	0.387	NA		NA
269695	269696	SpyM3_0993	SpyM3_0994	dltB	dltA	TRUE	0.981	-3.000	0.435	NA	N	NA
269696	269697	SpyM3_0994	SpyM3_0995	dltA		TRUE	0.977	12.000	0.549	NA		NA
269697	269698	SpyM3_0995	SpyM3_0996		uvrB	FALSE	0.061	264.000	0.000	NA		NA
269699	269700	SpyM3_0997	SpyM3_0998	glnP	glnQ	TRUE	0.986	0.000	0.326	1.000	Y	NA
269701	269702	SpyM3_0999	SpyM3_1000			TRUE	0.967	-3.000	0.182	NA		NA
269702	269703	SpyM3_1000	SpyM3_1001			FALSE	0.378	178.000	0.273	NA		NA
269703	269704	SpyM3_1001	SpyM3_1002			TRUE	0.988	-3.000	0.500	NA		NA
269704	269705	SpyM3_1002	SpyM3_1003			TRUE	0.997	3.000	0.500	0.014	Y	NA
269705	269706	SpyM3_1003	SpyM3_1004			TRUE	0.754	23.000	0.000	NA		NA
269706	269707	SpyM3_1004	SpyM3_1005			TRUE	0.913	-90.000	0.000	NA		NA
269707	269708	SpyM3_1005	SpyM3_1006			FALSE	0.343	106.000	0.064	1.000		NA
269708	269709	SpyM3_1006	SpyM3_1007		bglA.2	TRUE	0.975	9.000	0.500	1.000		NA
269711	269712	SpyM3_1009	SpyM3_1010			TRUE	0.559	69.000	0.009	NA		NA
269713	269714	SpyM3_1011	SpyM3_1012			TRUE	0.955	21.000	0.000	0.056	Y	NA
269716	269717	SpyM3_1014	SpyM3_1015			FALSE	0.306	78.000	0.000	NA	N	NA
269717	269718	SpyM3_1015	SpyM3_1016			TRUE	0.414	80.000	0.000	NA		NA
269718	269719	SpyM3_1016	SpyM3_1017			FALSE	0.268	103.000	0.000	NA		NA
269724	269725	SpyM3_1022	SpyM3_1023			FALSE	0.367	85.000	0.000	NA		NA
269725	269726	SpyM3_1023	SpyM3_1024			FALSE	0.030	341.000	0.000	1.000		NA
269726	269727	SpyM3_1024	SpyM3_1025		psr	FALSE	0.106	208.000	0.093	1.000	N	NA
269727	269728	SpyM3_1025	SpyM3_1026	psr	aroK	FALSE	0.116	208.000	0.111	1.000	N	NA
269728	269729	SpyM3_1026	SpyM3_1027	aroK	aroA.1	TRUE	0.965	-7.000	0.012	1.000	Y	NA
269729	269730	SpyM3_1027	SpyM3_1028	aroA.1		FALSE	0.251	102.000	0.003	1.000		NA
269730	269731	SpyM3_1028	SpyM3_1029		map	TRUE	0.971	2.000	0.373	1.000		NA
269731	269732	SpyM3_1029	SpyM3_1030	map		TRUE	0.904	15.000	0.235	1.000	N	NA
269732	269733	SpyM3_1030	SpyM3_1031			TRUE	0.950	9.000	0.342	1.000	N	NA
269733	269734	SpyM3_1031	SpyM3_1032		grab	FALSE	0.056	238.000	0.000	1.000		NA
269734	269735	SpyM3_1032	SpyM3_1033	grab	murZ	FALSE	0.028	357.000	0.000	1.000		NA
269735	269736	SpyM3_1033	SpyM3_1034	murZ	metK	FALSE	0.088	174.000	0.026	1.000	N	NA
269736	269737	SpyM3_1034	SpyM3_1035	metK	inlA	FALSE	0.017	537.000	0.000	1.000		NA
269739	269740	SpyM3_1037	SpyM3_1038		dnaX	TRUE	0.913	4.000	0.067	NA		NA
269740	269741	SpyM3_1038	SpyM3_1039	dnaX		TRUE	0.880	0.000	0.030	NA	N	NA
269743	269744	SpyM3_1041	SpyM3_1042		udk	TRUE	0.475	80.000	0.010	NA		NA
269746	269747	SpyM3_1044	SpyM3_1045		gapN	FALSE	0.249	95.000	0.028	1.000	N	NA
269747	269748	SpyM3_1045	SpyM3_1046	gapN	ptsI	FALSE	0.072	209.000	0.035	1.000	N	NA
269748	269749	SpyM3_1046	SpyM3_1047	ptsI	ptsH	TRUE	0.990	14.000	0.240	0.014	Y	NA
269750	269751	SpyM3_1048	SpyM3_1049	nrdH	nrdE.1	TRUE	0.958	20.000	0.562	1.000	N	NA
269751	269752	SpyM3_1049	SpyM3_1050	nrdE.1	nrdF.1	TRUE	0.742	333.000	0.500	0.002	Y	NA
269752	269753	SpyM3_1050	SpyM3_1051	nrdF.1		TRUE	0.922	-25.000	0.083	1.000	N	NA
269753	269754	SpyM3_1051	SpyM3_1052			FALSE	0.065	138.000	0.000	1.000	N	NA
269754	269755	SpyM3_1052	SpyM3_1053			TRUE	0.707	33.000	0.000	NA		NA
269755	269756	SpyM3_1053	SpyM3_1054			FALSE	0.268	103.000	0.000	NA		NA
269757	269758	SpyM3_1055	SpyM3_1056			TRUE	0.873	19.000	0.077	NA		NA
269758	269759	SpyM3_1056	SpyM3_1057			TRUE	0.983	-3.000	0.362	NA		NA
269759	269760	SpyM3_1057	SpyM3_1058		alaS	FALSE	0.014	359.000	0.000	1.000	N	NA
269760	269761	SpyM3_1058	SpyM3_1059	alaS	prtM.1	FALSE	0.009	528.000	0.000	1.000	N	NA
269761	269762	SpyM3_1059	SpyM3_1060	prtM.1		TRUE	0.551	63.000	0.012	1.000		NA
269762	269763	SpyM3_1060	SpyM3_1061			FALSE	0.152	141.000	0.012	1.000		NA
269763	269764	SpyM3_1061	SpyM3_1062		pepB	FALSE	0.012	376.000	0.000	1.000	N	NA
269764	269765	SpyM3_1062	SpyM3_1063	pepB	coiA	TRUE	0.937	13.000	0.204	NA		NA
269765	269766	SpyM3_1063	SpyM3_1064	coiA		FALSE	0.069	297.000	0.020	NA		NA
269766	269767	SpyM3_1064	SpyM3_1065		nagB	FALSE	0.106	170.000	0.051	1.000	N	NA
269768	269769	SpyM3_1066	SpyM3_1067	queA		TRUE	0.820	7.000	0.004	1.000		NA
269770	269771	SpyM3_1068	SpyM3_1069			TRUE	0.900	-3.000	0.000	NA		NA
269771	269772	SpyM3_1069	SpyM3_1070			TRUE	0.914	-15.000	0.000	NA		NA
269772	269773	SpyM3_1070	SpyM3_1071		sodM	FALSE	0.124	167.000	0.000	NA		NA
269773	269774	SpyM3_1071	SpyM3_1072	sodM	holA	FALSE	0.206	97.000	0.012	1.000	N	NA
269774	269775	SpyM3_1072	SpyM3_1073	holA	comEC	TRUE	0.703	71.000	0.163	1.000		NA
269775	269776	SpyM3_1073	SpyM3_1074	comEC	comEA	TRUE	0.956	-19.000	0.130	1.000		NA
269776	269777	SpyM3_1074	SpyM3_1075	comEA		FALSE	0.064	200.000	0.014	1.000	N	NA
269778	269779	SpyM3_1076	SpyM3_1077			TRUE	0.971	-10.000	0.209	1.000		NA
269780	269781	SpyM3_1078	SpyM3_1079	kup	deaD.1	FALSE	0.104	127.000	0.007	1.000	N	NA
269781	269782	SpyM3_1079	SpyM3_1080	deaD.1	prfC	FALSE	0.096	307.000	0.000	1.000	Y	NA
269784	269785	SpyM3_1082	SpyM3_1083		murF	TRUE	0.420	104.000	0.078	NA		NA
269785	269786	SpyM3_1083	SpyM3_1084	murF	ddlA	TRUE	0.593	199.000	0.046	0.010	Y	NA
269786	269787	SpyM3_1084	SpyM3_1085	ddlA	recR	FALSE	0.069	182.000	0.010	1.000	N	NA
269787	269788	SpyM3_1085	SpyM3_1086	recR		TRUE	0.637	47.000	0.000	NA		NA
269788	269789	SpyM3_1086	SpyM3_1087		fdhC	FALSE	0.023	561.000	0.000	NA		NA
269789	269790	SpyM3_1087	SpyM3_1088	fdhC		FALSE	0.338	124.000	0.105	NA		NA
269790	269791	SpyM3_1088	SpyM3_1089			FALSE	0.250	161.000	0.107	NA		NA
269791	269792	SpyM3_1089	SpyM3_1090		gpmA	FALSE	0.257	107.000	0.012	1.000		NA
269794	269795	SpyM3_1092	SpyM3_1093		cadA	TRUE	0.572	72.000	0.018	NA		NA
269795	269796	SpyM3_1093	SpyM3_1094	cadA		FALSE	0.023	530.000	0.000	NA		NA
269796	269797	SpyM3_1094	SpyM3_1095		mf4	TRUE	0.512	67.000	0.000	NA		NA
269797	269798	SpyM3_1095	SpyM3_1096	mf4		FALSE	0.054	245.000	0.000	1.000		NA
269798	269799	SpyM3_1096	SpyM3_1097			FALSE	0.236	112.000	0.000	NA		NA
269799	269800	SpyM3_1097	SpyM3_1098			TRUE	0.816	11.000	0.000	NA		NA
269800	269801	SpyM3_1098	SpyM3_1099			TRUE	0.853	3.000	0.000	NA		NA
269801	269802	SpyM3_1099	SpyM3_1100			TRUE	0.833	9.000	0.000	NA		NA
269802	269803	SpyM3_1100	SpyM3_1101		hylP.3	TRUE	0.787	15.000	0.000	NA		NA
269803	269804	SpyM3_1101	SpyM3_1102	hylP.3	pblB	TRUE	0.881	0.000	0.000	NA		NA
269804	269805	SpyM3_1102	SpyM3_1103	pblB		TRUE	0.993	-18.000	0.667	NA		NA
269805	269806	SpyM3_1103	SpyM3_1104		pblA	TRUE	0.968	-3.000	0.188	NA		NA
269806	269807	SpyM3_1104	SpyM3_1105	pblA		TRUE	0.970	0.000	0.250	NA		NA
269807	269808	SpyM3_1105	SpyM3_1106			TRUE	0.986	15.000	0.833	NA		NA
269808	269809	SpyM3_1106	SpyM3_1107			TRUE	0.946	11.000	0.222	NA		NA
269809	269810	SpyM3_1107	SpyM3_1108			TRUE	0.966	16.000	0.444	NA		NA
269810	269811	SpyM3_1108	SpyM3_1109			TRUE	0.990	1.000	0.750	NA		NA
269811	269812	SpyM3_1109	SpyM3_1110			TRUE	0.989	-40.000	0.467	NA		NA
269812	269813	SpyM3_1110	SpyM3_1111			TRUE	0.993	-40.000	0.667	NA		NA
269813	269814	SpyM3_1111	SpyM3_1112			TRUE	0.825	10.000	0.000	NA		NA
269814	269815	SpyM3_1112	SpyM3_1113			TRUE	0.881	0.000	0.000	NA		NA
269815	269816	SpyM3_1113	SpyM3_1114			TRUE	0.955	25.000	0.417	NA		NA
269816	269817	SpyM3_1114	SpyM3_1115			TRUE	0.754	81.000	0.263	NA		NA
269817	269818	SpyM3_1115	SpyM3_1116			FALSE	0.388	82.000	0.000	NA		NA
269818	269819	SpyM3_1116	SpyM3_1117			TRUE	0.913	-52.000	0.000	NA		NA
269819	269820	SpyM3_1117	SpyM3_1118			TRUE	0.910	-7.000	0.000	NA		NA
269820	269821	SpyM3_1118	SpyM3_1119			TRUE	0.443	77.000	0.000	NA		NA
269821	269822	SpyM3_1119	SpyM3_1120			TRUE	0.900	-3.000	0.000	NA		NA
269822	269823	SpyM3_1120	SpyM3_1121			TRUE	0.984	-7.000	0.353	NA		NA
269823	269824	SpyM3_1121	SpyM3_1122			TRUE	0.900	-3.000	0.000	NA		NA
269824	269825	SpyM3_1122	SpyM3_1123			FALSE	0.143	148.000	0.000	NA		NA
269825	269826	SpyM3_1123	SpyM3_1124			TRUE	0.593	108.000	0.250	NA		NA
269826	269827	SpyM3_1124	SpyM3_1125			TRUE	0.952	76.000	1.000	NA		NA
269827	269828	SpyM3_1125	SpyM3_1126			TRUE	0.900	-3.000	0.000	NA		NA
269828	269829	SpyM3_1126	SpyM3_1127			TRUE	0.900	-3.000	0.000	NA		NA
269829	269830	SpyM3_1127	SpyM3_1128			TRUE	0.689	36.000	0.000	NA		NA
269830	269831	SpyM3_1128	SpyM3_1129			TRUE	0.900	-3.000	0.000	NA		NA
269831	269832	SpyM3_1129	SpyM3_1130			TRUE	0.816	11.000	0.000	NA		NA
269832	269833	SpyM3_1130	SpyM3_1131			TRUE	0.992	-3.000	0.714	NA		NA
269833	269834	SpyM3_1131	SpyM3_1132			FALSE	0.034	365.000	0.000	NA		NA
269834	269835	SpyM3_1132	SpyM3_1133			TRUE	0.910	-7.000	0.000	NA		NA
269835	269836	SpyM3_1133	SpyM3_1134		recT	TRUE	0.992	-3.000	0.667	NA		NA
269836	269837	SpyM3_1134	SpyM3_1135	recT		TRUE	0.853	3.000	0.000	NA		NA
269837	269838	SpyM3_1135	SpyM3_1136			TRUE	0.842	5.000	0.000	NA		NA
269838	269839	SpyM3_1136	SpyM3_1137			TRUE	0.590	56.000	0.000	NA		NA
269839	269840	SpyM3_1137	SpyM3_1138			FALSE	0.145	146.000	0.000	NA		NA
269840	269841	SpyM3_1138	SpyM3_1139			TRUE	0.914	-19.000	0.000	NA		NA
269841	269842	SpyM3_1139	SpyM3_1140			FALSE	0.024	504.000	0.000	NA		NA
269842	269843	SpyM3_1140	SpyM3_1141		xis	TRUE	0.861	2.000	0.000	NA		NA
269843	269844	SpyM3_1141	SpyM3_1142	xis		FALSE	0.058	270.000	0.000	NA		NA
269845	269846	SpyM3_1143	SpyM3_1144			TRUE	0.809	12.000	0.000	NA		NA
269846	269847	SpyM3_1144	SpyM3_1145			FALSE	0.185	124.000	0.000	NA		NA
269848	269849	SpyM3_1146	SpyM3_1147			TRUE	0.543	99.000	0.156	NA		NA
269849	269850	SpyM3_1147	SpyM3_1148			TRUE	0.995	-22.000	0.828	NA		NA
269850	269851	SpyM3_1148	SpyM3_1149			TRUE	0.974	-7.000	0.203	NA		NA
269851	269852	SpyM3_1149	SpyM3_1150			FALSE	0.078	228.000	0.000	NA		NA
269852	269853	SpyM3_1150	SpyM3_1151		recN	FALSE	0.093	172.000	0.000	1.000		NA
269853	269854	SpyM3_1151	SpyM3_1152	recN		TRUE	0.712	22.000	0.037	1.000	N	NA
269854	269855	SpyM3_1152	SpyM3_1153		hlyA	TRUE	0.900	-13.000	0.048	1.000	N	NA
269855	269856	SpyM3_1153	SpyM3_1154	hlyA	fps	TRUE	0.903	-7.000	0.058	1.000	N	NA
269856	269857	SpyM3_1154	SpyM3_1155	fps	xseB	TRUE	0.899	0.000	0.100	1.000	N	NA
269857	269858	SpyM3_1155	SpyM3_1156	xseB	xseA	TRUE	0.998	-22.000	0.412	0.001	Y	NA
269858	269859	SpyM3_1156	SpyM3_1157	xseA	folD	FALSE	0.114	153.000	0.045	1.000	N	NA
269859	269860	SpyM3_1157	SpyM3_1158	folD		FALSE	0.059	208.000	0.013	1.000	N	NA
269860	269861	SpyM3_1158	SpyM3_1159		phr	FALSE	0.060	178.000	0.004	1.000	N	NA
269861	269862	SpyM3_1159	SpyM3_1160	phr		FALSE	0.059	149.000	0.000	1.000	N	NA
269862	269863	SpyM3_1160	SpyM3_1161			TRUE	0.993	0.000	0.640	1.000	Y	NA
269863	269864	SpyM3_1161	SpyM3_1162			FALSE	0.260	127.000	0.044	NA		NA
269865	269866	SpyM3_1163	SpyM3_1164	clpE	mutT	FALSE	0.182	128.000	0.079	1.000	N	NA
269866	269867	SpyM3_1164	SpyM3_1165	mutT		TRUE	0.789	51.000	0.114	NA		NA
269868	269869	SpyM3_1166	SpyM3_1167	ileS	divIVA	FALSE	0.048	273.000	0.012	NA	N	NA
269869	269870	SpyM3_1167	SpyM3_1168	divIVA		TRUE	0.981	10.000	0.579	NA		NA
269870	269871	SpyM3_1168	SpyM3_1169			TRUE	0.969	0.000	0.287	1.000		NA
269871	269872	SpyM3_1169	SpyM3_1170			TRUE	0.972	5.000	0.370	NA		NA
269872	269873	SpyM3_1170	SpyM3_1171			TRUE	0.936	12.000	0.194	NA		NA
269873	269874	SpyM3_1171	SpyM3_1172		ftsZ	TRUE	0.899	3.000	0.030	NA		NA
269874	269875	SpyM3_1172	SpyM3_1173	ftsZ	ftsA	TRUE	0.976	24.000	0.460	1.000	Y	NA
269875	269876	SpyM3_1173	SpyM3_1174	ftsA	divIB	FALSE	0.335	211.000	0.389	NA	N	NA
269876	269877	SpyM3_1174	SpyM3_1175	divIB	murG	TRUE	0.967	1.000	0.072	NA	Y	NA
269877	269878	SpyM3_1175	SpyM3_1176	murG	murD	TRUE	0.974	-21.000	0.060	1.000	Y	NA
269878	269879	SpyM3_1176	SpyM3_1177	murD		FALSE	0.044	356.000	0.006	NA		NA
269879	269880	SpyM3_1177	SpyM3_1178			FALSE	0.249	122.000	0.015	NA		NA
269880	269881	SpyM3_1178	SpyM3_1179			FALSE	0.030	318.000	0.003	NA	N	NA
269881	269882	SpyM3_1179	SpyM3_1180		glcK	TRUE	0.855	10.000	0.064	NA	N	NA
269882	269883	SpyM3_1180	SpyM3_1181	glcK		TRUE	0.979	5.000	0.496	NA		NA
269883	269884	SpyM3_1181	SpyM3_1182		dpr	FALSE	0.291	124.000	0.058	NA		NA
269886	269887	SpyM3_1184	SpyM3_1185			TRUE	0.886	4.000	0.016	NA		NA
269887	269888	SpyM3_1185	SpyM3_1186			FALSE	0.027	448.000	0.000	NA		NA
269888	269889	SpyM3_1186	SpyM3_1187			FALSE	0.011	414.000	0.000	1.000	N	NA
269889	269890	SpyM3_1187	SpyM3_1188		kdtB	TRUE	0.903	-13.000	0.052	1.000	N	NA
269890	269891	SpyM3_1188	SpyM3_1189	kdtB		TRUE	0.977	-10.000	0.367	1.000	N	NA
269891	269892	SpyM3_1189	SpyM3_1190		asnA	FALSE	0.110	123.000	0.006	1.000	N	NA
269892	269893	SpyM3_1190	SpyM3_1191	asnA	arcC	FALSE	0.091	313.000	0.000	1.000	Y	NA
269893	269894	SpyM3_1191	SpyM3_1192	arcC		TRUE	0.913	20.000	0.035	1.000	Y	NA
269894	269895	SpyM3_1192	SpyM3_1193			TRUE	0.885	17.000	0.140	1.000		NA
269895	269896	SpyM3_1193	SpyM3_1194		arcB	FALSE	0.202	170.000	0.104	1.000		NA
269896	269897	SpyM3_1194	SpyM3_1195	arcB		TRUE	0.793	40.000	0.104	1.000		NA
269897	269898	SpyM3_1195	arcA		sagP	FALSE	0.364	100.000	0.056	1.000		NA
269898	269899	arcA	SpyM3_1197	sagP		FALSE	0.022	276.000	0.000	1.000	N	NA
269901	269902	SpyM3_1199	SpyM3_1200			TRUE	0.830	14.000	0.009	NA		NA
269902	269903	SpyM3_1200	SpyM3_1201		yesM	TRUE	0.461	73.000	0.007	1.000		NA
269903	269904	SpyM3_1201	SpyM3_1202	yesM	yesN	TRUE	0.996	-3.000	0.480	0.011		NA
269904	269905	SpyM3_1202	SpyM3_1203	yesN		FALSE	0.070	245.000	0.000	NA		NA
269905	269906	SpyM3_1203	SpyM3_1204		sla	FALSE	0.038	346.000	0.000	NA		NA
269906	269907	SpyM3_1204	SpyM3_1205	sla	speK	FALSE	0.020	476.000	0.000	1.000		NA
269907	269908	SpyM3_1205	SpyM3_1206	speK		FALSE	0.048	304.000	0.000	NA		NA
269908	269909	SpyM3_1206	SpyM3_1207			TRUE	0.978	-12.000	0.231	NA		NA
269909	269910	SpyM3_1207	SpyM3_1208			FALSE	0.150	140.000	0.000	NA		NA
269910	269911	SpyM3_1208	SpyM3_1209			FALSE	0.238	111.000	0.000	NA		NA
269911	269912	SpyM3_1209	SpyM3_1210			TRUE	0.992	-3.000	0.667	NA		NA
269912	269913	SpyM3_1210	SpyM3_1211			TRUE	0.816	11.000	0.000	NA		NA
269913	269914	SpyM3_1211	SpyM3_1212			TRUE	0.993	3.000	1.000	NA		NA
269914	269915	SpyM3_1212	SpyM3_1213			TRUE	0.990	12.000	1.000	NA		NA
269915	269916	SpyM3_1213	SpyM3_1214		hylP.4	TRUE	0.736	15.000	0.000	1.000		NA
269916	269917	SpyM3_1214	SpyM3_1215	hylP.4		TRUE	0.900	-3.000	0.000	NA		NA
269917	269918	SpyM3_1215	SpyM3_1216			TRUE	0.970	-3.000	0.200	NA		NA
269918	269919	SpyM3_1216	SpyM3_1217			TRUE	0.973	-3.000	0.222	NA		NA
269919	269920	SpyM3_1217	SpyM3_1218			TRUE	0.959	-10.000	0.100	NA		NA
269920	269921	SpyM3_1218	SpyM3_1219			TRUE	0.939	4.000	0.150	NA		NA
269921	269922	SpyM3_1219	SpyM3_1220			TRUE	0.981	39.000	1.000	NA		NA
269922	269923	SpyM3_1220	SpyM3_1221			TRUE	0.994	0.000	1.000	NA		NA
269923	269924	SpyM3_1221	SpyM3_1222			TRUE	0.968	-3.000	0.188	NA		NA
269924	269925	SpyM3_1222	SpyM3_1223			TRUE	0.983	0.000	0.438	NA		NA
269925	269926	SpyM3_1223	SpyM3_1224			TRUE	0.984	-40.000	0.333	NA		NA
269926	269927	SpyM3_1224	SpyM3_1225			TRUE	0.600	54.000	0.000	NA		NA
269927	269928	SpyM3_1225	SpyM3_1226			TRUE	0.847	4.000	0.000	NA		NA
269928	269929	SpyM3_1226	SpyM3_1227			FALSE	0.161	132.000	0.000	NA		NA
269929	269930	SpyM3_1227	SpyM3_1228			TRUE	0.549	62.000	0.000	NA		NA
269930	269931	SpyM3_1228	SpyM3_1229			TRUE	0.914	-28.000	0.000	NA		NA
269931	269932	SpyM3_1229	SpyM3_1230			TRUE	0.982	5.000	0.567	NA		NA
269932	269933	SpyM3_1230	SpyM3_1231			TRUE	0.921	14.000	0.167	NA		NA
269933	269934	SpyM3_1231	SpyM3_1232			TRUE	0.663	83.000	0.182	NA		NA
269934	269935	SpyM3_1232	SpyM3_1233			TRUE	0.615	51.000	0.000	NA		NA
269935	269936	SpyM3_1233	SpyM3_1234			TRUE	0.557	61.000	0.000	NA		NA
269936	269937	SpyM3_1234	SpyM3_1235			FALSE	0.190	123.000	0.000	NA		NA
269937	269938	SpyM3_1235	SpyM3_1236			TRUE	0.889	-21.000	0.000	1.000		NA
269940	269941	SpyM3_1238	SpyM3_1239			FALSE	0.243	110.000	0.000	NA		NA
269941	269942	SpyM3_1239	SpyM3_1240			FALSE	0.171	128.000	0.000	NA		NA
269942	269943	SpyM3_1240	SpyM3_1241			FALSE	0.028	441.000	0.000	NA		NA
269943	269944	SpyM3_1241	SpyM3_1242			TRUE	0.900	-3.000	0.000	NA		NA
269944	269945	SpyM3_1242	SpyM3_1243			TRUE	0.900	-3.000	0.000	NA		NA
269945	269946	SpyM3_1243	SpyM3_1244			TRUE	0.825	10.000	0.000	NA		NA
269946	269947	SpyM3_1244	SpyM3_1245			TRUE	0.900	-3.000	0.000	NA		NA
269947	269948	SpyM3_1245	SpyM3_1246			TRUE	0.908	-6.000	0.000	NA		NA
269948	269949	SpyM3_1246	SpyM3_1247			TRUE	0.995	-3.000	1.000	NA		NA
269949	269950	SpyM3_1247	SpyM3_1248			TRUE	0.929	-3.000	0.018	NA		NA
269950	269951	SpyM3_1248	SpyM3_1249			FALSE	0.180	209.000	0.000	1.000	Y	NA
269951	269952	SpyM3_1249	SpyM3_1250			TRUE	0.961	-7.000	0.125	NA		NA
269952	269953	SpyM3_1250	SpyM3_1251			TRUE	0.942	1.000	0.125	NA		NA
269953	269954	SpyM3_1251	SpyM3_1252			TRUE	0.939	22.000	0.286	NA		NA
269954	269955	SpyM3_1252	SpyM3_1253			FALSE	0.143	148.000	0.000	NA		NA
269955	269956	SpyM3_1253	SpyM3_1254			TRUE	0.914	-19.000	0.000	NA		NA
269956	269957	SpyM3_1254	SpyM3_1255			FALSE	0.257	122.000	0.018	NA		NA
269957	269958	SpyM3_1255	SpyM3_1256			FALSE	0.285	100.000	0.000	NA		NA
269958	269959	SpyM3_1256	SpyM3_1257			TRUE	0.727	29.000	0.000	NA		NA
269959	269960	SpyM3_1257	SpyM3_1258			FALSE	0.129	159.000	0.000	NA		NA
269962	269963	SpyM3_1260	SpyM3_1261			TRUE	0.707	33.000	0.000	NA		NA
269963	269964	SpyM3_1261	SpyM3_1262			TRUE	0.933	11.000	0.000	0.053		NA
269965	269966	SpyM3_1263	SpyM3_1264			TRUE	0.989	14.000	1.000	NA		NA
269966	269967	SpyM3_1264	SpyM3_1265			TRUE	0.816	11.000	0.000	NA		NA
269967	269968	SpyM3_1265	SpyM3_1266		int315.4	FALSE	0.203	119.000	0.000	NA		NA
269969	269970	SpyM3_1267	SpyM3_1268	msrA.1		TRUE	0.985	43.000	0.875	1.000	Y	NA
269970	269971	SpyM3_1268	SpyM3_1269		ccdA	TRUE	0.984	13.000	0.500	1.000	Y	NA
269971	269972	SpyM3_1269	SpyM3_1270	ccdA		FALSE	0.160	221.000	0.000	0.065	N	NA
269972	269973	SpyM3_1270	SpyM3_1271			TRUE	0.733	92.000	0.375	1.000		NA
269975	269976	SpyM3_1273	SpyM3_1274	valS		TRUE	0.886	2.000	0.008	NA		NA
269976	269977	SpyM3_1274	SpyM3_1275			TRUE	0.835	25.000	0.053	NA		NA
269977	269978	SpyM3_1275	SpyM3_1276			TRUE	0.900	-3.000	0.000	NA		NA
269978	269979	SpyM3_1276	SpyM3_1277			FALSE	0.026	476.000	0.000	NA		NA
269979	269980	SpyM3_1277	SpyM3_1278			TRUE	0.765	21.000	0.000	NA		NA
400257	269981	SpyM3_t49	SpyM3_1279	tRNA-Thr	aroA.2	FALSE	0.072	242.000	0.000	NA		NA
269981	269982	SpyM3_1279	SpyM3_1280	aroA.2	aroB	TRUE	0.947	56.000	0.003	0.003	Y	NA
269983	269984	SpyM3_1281	SpyM3_1282			TRUE	0.861	2.000	0.000	NA		NA
269984	269985	SpyM3_1282	SpyM3_1283			TRUE	0.697	53.000	0.026	NA		NA
269985	269986	SpyM3_1283	SpyM3_1284		aroE.1	FALSE	0.026	253.000	0.000	1.000	N	NA
269986	269987	SpyM3_1284	SpyM3_1285	aroE.1		FALSE	0.147	138.000	0.061	1.000	N	NA
269987	269988	SpyM3_1285	SpyM3_1286			TRUE	0.857	20.000	0.167	1.000	N	NA
269988	269989	SpyM3_1286	SpyM3_1287			TRUE	0.994	0.000	0.167	0.010	Y	NA
269989	269990	SpyM3_1287	SpyM3_1288			TRUE	0.993	-10.000	0.667	NA		NA
269990	269991	SpyM3_1288	SpyM3_1289			FALSE	0.047	306.000	0.000	NA		NA
269991	269992	SpyM3_1289	SpyM3_1290			TRUE	0.952	81.000	0.333	0.032	Y	NA
269992	269993	SpyM3_1290	SpyM3_1291			TRUE	0.998	10.000	0.917	0.032	Y	NA
269995	269996	SpyM3_1293	SpyM3_1294		hyl	TRUE	0.693	24.000	0.000	1.000		NA
269996	269997	SpyM3_1294	SpyM3_1295	hyl		TRUE	0.546	51.000	0.000	1.000		NA
269998	269999	SpyM3_1296	SpyM3_1297			TRUE	0.915	15.000	0.194	1.000		NA
270000	270001	SpyM3_1298	SpyM3_1299			FALSE	0.012	665.000	0.000	NA	N	NA
270001	270002	SpyM3_1299	SpyM3_1300			FALSE	0.105	191.000	0.000	NA		NA
270004	270005	SpyM3_1302	SpyM3_1303			TRUE	0.881	0.000	0.000	NA		NA
270005	270006	SpyM3_1303	SpyM3_1304			TRUE	0.825	10.000	0.000	NA		NA
270006	270007	SpyM3_1304	SpyM3_1305			TRUE	0.816	11.000	0.000	NA		NA
270007	270008	SpyM3_1305	SpyM3_1306			TRUE	0.809	12.000	0.000	NA		NA
270008	270009	SpyM3_1306	SpyM3_1307			TRUE	0.861	2.000	0.000	NA		NA
270009	270010	SpyM3_1307	SpyM3_1308			FALSE	0.040	336.000	0.000	NA		NA
270010	270011	SpyM3_1308	SpyM3_1309			TRUE	0.996	-28.000	1.000	NA		NA
270011	270012	SpyM3_1309	SpyM3_1310			TRUE	0.958	11.000	0.300	NA		NA
270012	270013	SpyM3_1310	SpyM3_1311			FALSE	0.295	98.000	0.000	NA		NA
270013	270014	SpyM3_1311	SpyM3_1312			TRUE	0.971	1.000	0.333	1.000		NA
270014	270015	SpyM3_1312	SpyM3_1313			TRUE	0.942	1.000	0.125	NA		NA
270015	270016	SpyM3_1313	SpyM3_1314			TRUE	0.992	-7.000	0.625	NA		NA
270016	270017	SpyM3_1314	SpyM3_1315			TRUE	0.996	-27.000	0.929	NA		NA
270017	270018	SpyM3_1315	SpyM3_1316			TRUE	0.894	13.000	0.134	1.000		NA
270018	270019	SpyM3_1316	SpyM3_1317			TRUE	0.879	12.000	0.052	NA		NA
270019	270020	SpyM3_1317	SpyM3_1318			TRUE	0.991	2.000	0.800	NA		NA
270020	270021	SpyM3_1318	SpyM3_1319			TRUE	0.833	9.000	0.000	NA		NA
270021	270022	SpyM3_1319	SpyM3_1320			TRUE	0.900	-3.000	0.000	NA		NA
270022	270023	SpyM3_1320	SpyM3_1321			TRUE	0.812	14.000	0.002	NA		NA
270023	270024	SpyM3_1321	SpyM3_1322			TRUE	0.819	13.000	0.002	NA		NA
270024	270025	SpyM3_1322	SpyM3_1323			TRUE	0.961	18.000	0.400	NA		NA
270025	270026	SpyM3_1323	SpyM3_1324			FALSE	0.140	150.000	0.000	NA		NA
270026	270027	SpyM3_1324	SpyM3_1325			TRUE	0.836	7.000	0.000	NA		NA
270027	270028	SpyM3_1325	SpyM3_1326			TRUE	0.976	-31.000	0.214	NA		NA
270028	270029	SpyM3_1326	SpyM3_1327			TRUE	0.840	36.000	0.118	NA		NA
270029	270030	SpyM3_1327	SpyM3_1328			TRUE	0.414	187.000	0.000	0.003		NA
270030	270031	SpyM3_1328	SpyM3_1329			TRUE	0.954	-34.000	0.118	1.000		NA
270031	270032	SpyM3_1329	SpyM3_1330			FALSE	0.022	634.000	0.000	NA		NA
270032	270033	SpyM3_1330	SpyM3_1331			FALSE	0.027	451.000	0.000	NA		NA
270033	270034	SpyM3_1331	SpyM3_1332			FALSE	0.052	287.000	0.000	NA		NA
270034	270035	SpyM3_1332	SpyM3_1333			FALSE	0.124	166.000	0.000	NA		NA
270035	270036	SpyM3_1333	SpyM3_1334			FALSE	0.054	284.000	0.000	NA		NA
270036	270037	SpyM3_1334	SpyM3_1335			TRUE	0.900	-3.000	0.000	NA		NA
270037	270038	SpyM3_1335	SpyM3_1336			TRUE	0.900	-3.000	0.000	NA		NA
270038	270039	SpyM3_1336	SpyM3_1337			FALSE	0.072	242.000	0.000	NA		NA
270039	270040	SpyM3_1337	SpyM3_1338			TRUE	0.914	-16.000	0.000	NA		NA
270040	270041	SpyM3_1338	SpyM3_1339			FALSE	0.070	245.000	0.000	NA		NA
270041	270042	SpyM3_1339	SpyM3_1340			TRUE	0.630	48.000	0.000	NA		NA
270042	270043	SpyM3_1340	SpyM3_1341			TRUE	0.970	-10.000	0.167	NA		NA
270043	270044	SpyM3_1341	SpyM3_1342			TRUE	0.904	12.000	0.100	NA		NA
270044	270045	SpyM3_1342	SpyM3_1343			TRUE	0.782	16.000	0.000	NA		NA
270045	270046	SpyM3_1343	SpyM3_1344			FALSE	0.276	102.000	0.000	NA		NA
270046	270047	SpyM3_1344	SpyM3_1345			TRUE	0.970	1.000	0.286	NA		NA
270047	270048	SpyM3_1345	SpyM3_1346			FALSE	0.077	229.000	0.000	NA		NA
270048	270049	SpyM3_1346	SpyM3_1347			TRUE	0.782	16.000	0.000	NA		NA
270049	270050	SpyM3_1347	SpyM3_1348			TRUE	0.718	31.000	0.000	NA		NA
270050	270051	SpyM3_1348	SpyM3_1349			FALSE	0.312	95.000	0.000	NA		NA
270052	270053	SpyM3_1350	SpyM3_1351			TRUE	0.984	-16.000	0.333	NA		NA
270053	270054	SpyM3_1351	SpyM3_1352			TRUE	0.816	11.000	0.000	NA		NA
270054	270055	SpyM3_1352	SpyM3_1353			FALSE	0.059	269.000	0.000	NA		NA
270055	270056	SpyM3_1353	SpyM3_1354		int315.5	FALSE	0.118	174.000	0.000	NA		NA
270056	270057	SpyM3_1354	SpyM3_1355	int315.5		FALSE	0.128	148.000	0.003	1.000		NA
270057	270058	SpyM3_1355	SpyM3_1356			TRUE	0.513	80.000	0.025	NA		NA
270058	270059	SpyM3_1356	SpyM3_1357			FALSE	0.032	370.000	0.000	NA		NA
400275	400274	SpyM3_t50	SpyM3_t51	tRNA-Glu	tRNA-Ile	TRUE	0.754	23.000	0.000	NA		NA
400274	400273	SpyM3_t51	SpyM3_t52	tRNA-Ile	tRNA-Thr	TRUE	0.689	36.000	0.000	NA		NA
400273	400272	SpyM3_t52	SpyM3_t53	tRNA-Thr	tRNA-Leu	TRUE	0.816	11.000	0.000	NA		NA
400272	400271	SpyM3_t53	SpyM3_t54	tRNA-Leu	tRNA-Lys	TRUE	0.839	6.000	0.000	NA		NA
400271	400270	SpyM3_t54	SpyM3_t55	tRNA-Lys	tRNA-Asp	TRUE	0.713	32.000	0.000	NA		NA
400270	400269	SpyM3_t55	SpyM3_t56	tRNA-Asp	tRNA-Val	TRUE	0.778	18.000	0.000	NA		NA
400269	2179446	SpyM3_t56	SpyM3_r17	tRNA-Val		TRUE	0.778	18.000	0.000	NA		NA
2179446	2179447	SpyM3_r17	SpyM3_r09			FALSE	0.388	82.000	0.000	NA		NA
2179447	400268	SpyM3_r09	SpyM3_t57		tRNA-Ala	FALSE	0.050	296.000	0.000	NA		NA
400268	2179448	SpyM3_t57	SpyM3_r10	tRNA-Ala		TRUE	0.656	45.000	0.000	NA		NA
2179448	270060	SpyM3_r10	SpyM3_1358			FALSE	0.019	911.000	0.000	NA		NA
270060	270061	SpyM3_1358	SpyM3_1359		comFC	TRUE	0.589	80.000	0.080	NA		NA
270061	270062	SpyM3_1359	SpyM3_1360	comFC		TRUE	0.963	-28.000	0.130	NA		NA
270062	270063	SpyM3_1360	SpyM3_1361			TRUE	0.735	27.000	0.000	NA		NA
270064	270065	SpyM3_1362	SpyM3_1363		cysM	FALSE	0.205	128.000	0.033	1.000		NA
270066	270067	SpyM3_1364	SpyM3_1365			TRUE	0.945	0.000	0.151	1.000		NA
270067	270068	SpyM3_1365	SpyM3_1366			TRUE	0.842	37.000	0.164	1.000		NA
270068	270069	SpyM3_1366	SpyM3_1367			TRUE	0.999	-7.000	0.853	0.010	Y	NA
270069	270070	SpyM3_1367	SpyM3_1368			TRUE	0.992	-3.000	0.679	NA		NA
270070	270071	SpyM3_1368	SpyM3_1369			FALSE	0.274	123.000	0.039	NA		NA
270071	270072	SpyM3_1369	SpyM3_1370		pppL	TRUE	0.995	-3.000	0.704	1.000	Y	NA
270072	270073	SpyM3_1370	SpyM3_1371	pppL	sunL	TRUE	0.691	38.000	0.074	1.000	N	NA
270073	270074	SpyM3_1371	SpyM3_1372	sunL	fmt	TRUE	0.990	-10.000	0.305	1.000	Y	NA
270074	270075	SpyM3_1372	SpyM3_1373	fmt	priA	TRUE	0.516	62.000	0.052	1.000	N	NA
270075	270076	SpyM3_1373	SpyM3_1374	priA		TRUE	0.779	65.000	0.032	0.051	N	NA
270076	270077	SpyM3_1374	SpyM3_1375		gmk	TRUE	0.951	16.000	0.471	1.000	N	NA
270077	270078	SpyM3_1375	SpyM3_1376	gmk		FALSE	0.243	110.000	0.010	1.000		NA
270078	270079	SpyM3_1376	SpyM3_1377			FALSE	0.157	130.000	0.006	1.000		NA
270080	270081	SpyM3_1378	SpyM3_1379	atoB	atoD.1	TRUE	0.673	99.000	0.150	1.000	Y	NA
270081	270082	SpyM3_1379	SpyM3_1380	atoD.1	atoA	TRUE	0.995	2.000	0.200	0.002	Y	NA
270082	270083	SpyM3_1380	SpyM3_1381	atoA		TRUE	0.895	33.000	0.000	0.039		NA
270083	270084	SpyM3_1381	SpyM3_1382			TRUE	0.859	73.000	0.000	0.001		NA
270084	270085	SpyM3_1382	SpyM3_1383			TRUE	0.779	71.000	0.333	1.000	N	NA
270085	270086	SpyM3_1383	SpyM3_1384		luxS	TRUE	0.849	-16.000	0.006	1.000	N	NA
270087	270088	SpyM3_1385	SpyM3_1386			TRUE	0.853	14.000	0.029	NA		NA
270088	270089	SpyM3_1386	SpyM3_1387			FALSE	0.027	445.000	0.000	NA		NA
270089	270090	SpyM3_1387	SpyM3_1388			TRUE	0.738	119.000	0.579	NA		NA
270091	270092	SpyM3_1389	SpyM3_1390	recU	pbp1A	TRUE	0.980	-13.000	0.319	1.000		NA
270093	270094	SpyM3_1391	SpyM3_1392	pepC	nadE	FALSE	0.076	185.000	0.017	1.000	N	NA
270094	270095	SpyM3_1392	SpyM3_1393	nadE		TRUE	0.996	-3.000	0.194	0.003	Y	NA
270095	270096	SpyM3_1393	SpyM3_1394		aapA	FALSE	0.094	170.000	0.032	1.000	N	NA
270096	270097	SpyM3_1394	SpyM3_1395	aapA	nox.2	FALSE	0.096	169.000	0.033	1.000	N	NA
270097	270098	SpyM3_1395	SpyM3_1396	nox.2		TRUE	0.731	64.000	0.117	NA		NA
270098	270099	SpyM3_1396	SpyM3_1397			TRUE	0.694	104.000	0.364	NA		NA
270099	270100	SpyM3_1397	SpyM3_1398			TRUE	0.986	0.000	0.310	1.000	Y	NA
270100	270101	SpyM3_1398	SpyM3_1399			FALSE	0.072	195.000	0.018	1.000	N	NA
270101	270102	SpyM3_1399	SpyM3_1400		mraY	FALSE	0.075	158.000	0.007	1.000	N	NA
270102	270103	SpyM3_1400	SpyM3_1401	mraY	pbp2X	TRUE	0.951	2.000	0.038	1.000	Y	NA
270103	270104	SpyM3_1401	SpyM3_1402	pbp2X	ftsL	TRUE	0.724	91.000	0.456	1.000	N	NA
270104	270105	SpyM3_1402	SpyM3_1403	ftsL	mraW	TRUE	0.918	-25.000	0.077	1.000	N	NA
270105	270106	SpyM3_1403	SpyM3_1404	mraW		TRUE	0.749	24.000	0.000	NA		NA
270106	270107	SpyM3_1404	SpyM3_1405			FALSE	0.276	102.000	0.000	NA		NA
270107	270108	SpyM3_1405	SpyM3_1406		proA	TRUE	0.914	-19.000	0.000	NA		NA
270108	270109	SpyM3_1406	SpyM3_1407	proA	proB	TRUE	0.997	-7.000	0.281	0.002	Y	NA
270109	270110	SpyM3_1407	SpyM3_1408	proB		FALSE	0.106	190.000	0.000	NA		NA
270112	270113	SpyM3_1410	SpyM3_1411			FALSE	0.062	262.000	0.000	NA		NA
270113	270114	SpyM3_1411	SpyM3_1412			FALSE	0.055	280.000	0.000	NA		NA
270114	270115	SpyM3_1412	SpyM3_1413			FALSE	0.218	116.000	0.000	NA		NA
270115	270116	SpyM3_1413	SpyM3_1414			TRUE	0.900	-3.000	0.000	NA		NA
270116	270117	SpyM3_1414	SpyM3_1415			TRUE	0.825	10.000	0.000	NA		NA
270117	270118	SpyM3_1415	SpyM3_1416			TRUE	0.900	-3.000	0.000	NA		NA
270118	270119	SpyM3_1416	SpyM3_1417			TRUE	0.990	12.000	1.000	NA		NA
270119	270120	SpyM3_1417	SpyM3_1418		hylP.6	TRUE	0.781	10.000	0.000	1.000		NA
270120	270121	SpyM3_1418	SpyM3_1419	hylP.6		TRUE	0.900	-3.000	0.000	NA		NA
270121	270122	SpyM3_1419	SpyM3_1420			TRUE	0.825	10.000	0.000	NA		NA
270122	270123	SpyM3_1420	SpyM3_1421			TRUE	0.967	12.000	0.400	NA		NA
270123	270124	SpyM3_1421	SpyM3_1422			TRUE	0.963	15.000	0.400	NA		NA
270124	270125	SpyM3_1422	SpyM3_1423			TRUE	0.780	75.000	0.235	NA		NA
270125	270126	SpyM3_1423	SpyM3_1424			TRUE	0.734	54.000	0.062	NA		NA
270126	270127	SpyM3_1424	SpyM3_1425			TRUE	0.874	12.000	0.041	NA		NA
270127	270128	SpyM3_1425	SpyM3_1426			TRUE	0.990	4.000	0.800	NA		NA
270128	270129	SpyM3_1426	SpyM3_1427			TRUE	0.983	15.000	0.750	NA		NA
270129	270130	SpyM3_1427	SpyM3_1428			TRUE	0.983	11.000	0.667	NA		NA
270130	270131	SpyM3_1428	SpyM3_1429			TRUE	0.975	12.000	0.500	NA		NA
270131	270132	SpyM3_1429	SpyM3_1430			TRUE	0.932	13.000	0.192	NA		NA
270132	270133	SpyM3_1430	SpyM3_1431			FALSE	0.219	168.000	0.077	NA		NA
270133	270134	SpyM3_1431	SpyM3_1432			TRUE	0.992	5.000	1.000	NA		NA
270134	270135	SpyM3_1432	SpyM3_1433			TRUE	0.892	28.000	0.167	NA		NA
270135	270136	SpyM3_1433	SpyM3_1434			TRUE	0.979	-40.000	0.250	NA		NA
270136	270137	SpyM3_1434	SpyM3_1435			TRUE	0.847	79.000	0.429	NA		NA
270137	270138	SpyM3_1435	SpyM3_1436			TRUE	0.993	-10.000	0.176	0.003		NA
270138	270139	SpyM3_1436	SpyM3_1437			TRUE	0.452	111.000	0.176	1.000		NA
270139	270140	SpyM3_1437	SpyM3_1438			FALSE	0.159	133.000	0.000	NA		NA
270140	270141	SpyM3_1438	SpyM3_1439			TRUE	0.910	-7.000	0.000	NA		NA
270141	270142	SpyM3_1439	SpyM3_1440			TRUE	0.984	1.000	0.500	NA		NA
270142	270143	SpyM3_1440	SpyM3_1441			TRUE	0.978	-3.000	0.286	NA		NA
270143	270144	SpyM3_1441	SpyM3_1442			FALSE	0.034	366.000	0.000	NA		NA
270144	270145	SpyM3_1442	SpyM3_1443		polA.2	TRUE	0.925	5.000	0.111	NA		NA
270145	270146	SpyM3_1443	SpyM3_1444	polA.2		TRUE	0.897	43.000	0.250	NA		NA
270146	270147	SpyM3_1444	SpyM3_1445			TRUE	0.979	14.000	0.643	NA		NA
270147	270148	SpyM3_1445	SpyM3_1446			TRUE	0.952	0.000	0.143	NA		NA
270148	270149	SpyM3_1446	SpyM3_1447			TRUE	0.929	88.000	1.000	NA		NA
270149	270150	SpyM3_1447	SpyM3_1448			TRUE	0.900	-3.000	0.000	NA		NA
270150	270151	SpyM3_1448	SpyM3_1449			TRUE	0.900	-3.000	0.000	NA		NA
270151	270152	SpyM3_1449	SpyM3_1450			TRUE	0.971	31.000	0.667	NA		NA
270152	270153	SpyM3_1450	SpyM3_1451			TRUE	0.996	-7.000	1.000	NA		NA
270153	270154	SpyM3_1451	SpyM3_1452			TRUE	0.727	29.000	0.000	NA		NA
270154	270155	SpyM3_1452	SpyM3_1453			FALSE	0.356	88.000	0.000	NA		NA
270155	270156	SpyM3_1453	SpyM3_1454			TRUE	0.765	21.000	0.000	NA		NA
270157	270158	SpyM3_1455	SpyM3_1456			TRUE	0.793	14.000	0.000	NA		NA
270158	270159	SpyM3_1456	SpyM3_1457			TRUE	0.816	11.000	0.000	NA		NA
270159	270160	SpyM3_1457	SpyM3_1458		int315.6	FALSE	0.117	176.000	0.000	NA		NA
270161	270162	SpyM3_1459	SpyM3_1460			TRUE	0.970	5.000	0.341	NA		NA
270162	270163	SpyM3_1460	SpyM3_1461			TRUE	0.680	76.000	0.136	NA		NA
270163	270164	SpyM3_1461	SpyM3_1462		tkt	FALSE	0.376	193.000	0.300	NA		NA
270164	270165	SpyM3_1462	SpyM3_1463	tkt	tal	FALSE	0.169	218.000	0.000	1.000	Y	NA
270165	270166	SpyM3_1463	SpyM3_1464	tal		FALSE	0.178	126.000	0.000	NA		NA
270166	270167	SpyM3_1464	SpyM3_1465		npx	TRUE	0.988	-10.000	0.462	NA		NA
270167	270168	SpyM3_1465	SpyM3_1466	npx	glpF.1	TRUE	0.951	16.000	0.364	1.000		NA
270168	270169	SpyM3_1466	SpyM3_1467	glpF.1	glpO	TRUE	0.974	2.000	0.500	1.000	N	NA
270169	270170	SpyM3_1467	SpyM3_1468	glpO	glpK	TRUE	0.996	16.000	0.500	0.001	Y	NA
270170	270171	SpyM3_1468	SpyM3_1469	glpK		FALSE	0.027	359.000	0.000	1.000		NA
270171	270172	SpyM3_1469	SpyM3_1470			FALSE	0.244	127.000	0.029	NA		NA
270172	270173	SpyM3_1470	SpyM3_1471		glyS	FALSE	0.183	154.000	0.020	NA		NA
270173	270174	SpyM3_1471	SpyM3_1472	glyS	glyQ	TRUE	0.773	367.000	0.651	0.001	Y	NA
270174	270175	SpyM3_1472	SpyM3_1473	glyQ		FALSE	0.024	372.000	0.000	1.000		NA
270175	270176	SpyM3_1473	SpyM3_1474			FALSE	0.190	162.000	0.074	1.000		NA
270176	270177	SpyM3_1474	SpyM3_1475		nagA	FALSE	0.242	122.000	0.045	1.000		NA
270177	270178	SpyM3_1475	SpyM3_1476	nagA		FALSE	0.230	118.000	0.090	1.000	N	NA
270182	270183	SpyM3_1480	SpyM3_1481			TRUE	0.912	2.000	0.047	NA		NA
270183	270184	SpyM3_1481	SpyM3_1482		lacD.1	FALSE	0.127	209.000	0.019	NA		NA
270184	270185	SpyM3_1482	SpyM3_1483	lacD.1	lacC.1	TRUE	0.506	150.000	0.000	0.002		NA
270185	270186	SpyM3_1483	SpyM3_1484	lacC.1	lacB.1	TRUE	0.781	10.000	0.000	1.000		NA
270186	270187	SpyM3_1484	SpyM3_1485	lacB.1	lacA.1	TRUE	0.996	15.000	0.500	0.002	Y	NA
270187	270188	SpyM3_1485	SpyM3_1486	lacA.1		FALSE	0.129	257.000	0.000	1.000	Y	NA
270188	270189	SpyM3_1486	SpyM3_1487			TRUE	0.962	26.000	0.000	0.017	Y	NA
270189	270190	SpyM3_1487	SpyM3_1488			TRUE	0.998	-7.000	0.429	0.012	Y	NA
270192	270193	SpyM3_1490	SpyM3_1491	copZ	copA	TRUE	0.984	14.000	0.048	0.003	Y	NA
270193	270194	SpyM3_1491	SpyM3_1492	copA	copY	TRUE	0.878	0.000	0.064	1.000	N	NA
270196	270197	SpyM3_1494	SpyM3_1495	rbfA	infB	TRUE	0.630	206.000	0.530	1.000	Y	NA
270197	270198	SpyM3_1495	SpyM3_1496	infB		TRUE	0.867	77.000	0.223	NA	Y	NA
270198	270199	SpyM3_1496	SpyM3_1497			TRUE	0.982	-7.000	0.408	NA	N	NA
270199	270200	SpyM3_1497	SpyM3_1498		nusA	TRUE	0.975	16.000	0.323	NA	Y	NA
270200	270201	SpyM3_1498	SpyM3_1499	nusA		TRUE	0.679	175.000	0.759	NA		NA
270201	400267	SpyM3_1499	SpyM3_t58		tRNA-Ser	FALSE	0.249	108.000	0.000	NA		NA
400267	270202	SpyM3_t58	SpyM3_1500	tRNA-Ser		TRUE	0.525	65.000	0.000	NA		NA
270202	270203	SpyM3_1500	SpyM3_1501			TRUE	0.955	0.000	0.154	NA		NA
270203	270204	SpyM3_1501	SpyM3_1502			TRUE	0.642	64.000	0.107	NA	N	NA
270204	270205	SpyM3_1502	SpyM3_1503			TRUE	0.926	3.000	0.167	NA	N	NA
270206	270207	SpyM3_1504	SpyM3_1505	hit		TRUE	0.944	-3.000	0.063	NA		NA
270208	270209	SpyM3_1506	SpyM3_1507			TRUE	0.947	9.000	0.283	NA	N	NA
270209	270210	SpyM3_1507	SpyM3_1508			TRUE	0.943	-25.000	0.033	NA		NA
270210	270211	SpyM3_1508	SpyM3_1509			FALSE	0.160	154.000	0.008	NA		NA
270212	270213	SpyM3_1510	SpyM3_1511		manL	FALSE	0.029	352.000	0.000	1.000		NA
270213	270214	SpyM3_1511	SpyM3_1512	manL	manM	TRUE	0.984	89.000	0.943	0.017	Y	NA
270214	270215	SpyM3_1512	SpyM3_1513	manM	manN	TRUE	0.997	17.000	0.812	0.017	Y	NA
270215	270216	SpyM3_1513	SpyM3_1514	manN		TRUE	0.973	21.000	0.583	NA		NA
270216	270217	SpyM3_1514	SpyM3_1515			FALSE	0.043	321.000	0.000	NA		NA
270217	270218	SpyM3_1515	SpyM3_1516		serS	FALSE	0.011	405.000	0.000	1.000	N	NA
270219	270220	SpyM3_1517	SpyM3_1518	accA	accD	TRUE	0.997	-3.000	0.234	0.002	Y	NA
270220	270221	SpyM3_1518	SpyM3_1519	accD	accC	TRUE	0.990	9.000	0.090	0.002	Y	NA
270221	270222	SpyM3_1519	SpyM3_1520	accC	fabZ	TRUE	0.890	32.000	0.045	1.000	Y	NA
270222	270223	SpyM3_1520	SpyM3_1521	fabZ	accB	TRUE	0.992	-3.000	0.047	0.006	Y	NA
270223	270224	SpyM3_1521	SpyM3_1522	accB	fabF	TRUE	0.959	2.000	0.074	1.000	Y	NA
270224	270225	SpyM3_1522	SpyM3_1523	fabF	fabG	TRUE	0.927	15.000	0.056	1.000	Y	NA
270225	270226	SpyM3_1523	SpyM3_1524	fabG	fabD	TRUE	0.998	-10.000	0.432	0.006	Y	NA
270226	270227	SpyM3_1524	SpyM3_1525	fabD	fabK	TRUE	0.840	25.000	0.099	1.000		NA
270227	270228	SpyM3_1525	SpyM3_1526	fabK	acpP.2	FALSE	0.179	258.000	0.216	1.000		NA
270228	270229	SpyM3_1526	SpyM3_1527	acpP.2	fabH	TRUE	0.910	61.000	0.065	0.006		NA
270229	270230	SpyM3_1527	SpyM3_1528	fabH		TRUE	0.871	1.000	0.070	1.000	N	NA
270230	270231	SpyM3_1528	SpyM3_1529		phaB	TRUE	0.488	77.000	0.098	1.000	N	NA
270231	270232	SpyM3_1529	SpyM3_1530	phaB	dnaJ	FALSE	0.033	220.000	0.000	1.000	N	NA
270232	270233	SpyM3_1530	SpyM3_1531	dnaJ	dnaK	TRUE	0.700	227.000	0.196	0.003	Y	NA
270233	270234	SpyM3_1531	SpyM3_1532	dnaK	grpE	TRUE	0.630	180.000	0.026	0.006	Y	NA
270234	270235	SpyM3_1532	SpyM3_1533	grpE	hrcA	TRUE	0.834	3.000	0.051	1.000	N	NA
270235	270236	SpyM3_1533	SpyM3_1534	hrcA		FALSE	0.094	135.000	0.009	1.000	N	NA
270236	270237	SpyM3_1534	SpyM3_1535			TRUE	0.943	-3.000	0.174	1.000	N	NA
270237	270238	SpyM3_1535	SpyM3_1536			TRUE	0.951	-10.000	0.174	1.000	N	NA
270238	270239	SpyM3_1536	SpyM3_1537			FALSE	0.023	392.000	0.000	1.000		NA
270239	270240	SpyM3_1537	SpyM3_1538			FALSE	0.084	219.000	0.000	NA		NA
270240	270241	SpyM3_1538	SpyM3_1539		gatB	TRUE	0.900	-3.000	0.000	NA		NA
270241	270242	SpyM3_1539	SpyM3_1540	gatB	gatA	TRUE	0.998	0.000	0.492	0.002	Y	NA
270242	270243	SpyM3_1540	SpyM3_1541	gatA	gatC	TRUE	0.998	0.000	0.643	0.002	Y	NA
270243	270244	SpyM3_1541	SpyM3_1542	gatC		FALSE	0.066	231.000	0.002	1.000		NA
270244	270245	SpyM3_1542	SpyM3_1543			FALSE	0.019	486.000	0.000	1.000		NA
270245	270246	SpyM3_1543	SpyM3_1544		codY	FALSE	0.158	147.000	0.083	1.000	N	NA
270246	270247	SpyM3_1544	SpyM3_1545	codY		FALSE	0.057	218.000	0.015	1.000	N	NA
270251	270252	SpyM3_1549	SpyM3_1550			TRUE	0.801	13.000	0.000	NA		NA
270252	270253	SpyM3_1550	SpyM3_1551		recG	FALSE	0.020	293.000	0.000	1.000	N	NA
270255	270256	SpyM3_1553	SpyM3_1554			TRUE	0.985	-63.000	0.429	1.000		NA
270256	270257	SpyM3_1554	SpyM3_1555			TRUE	0.989	-3.000	0.562	NA		NA
270257	270258	SpyM3_1555	SpyM3_1556		cycC	TRUE	0.948	-3.000	0.081	NA		NA
270258	270259	SpyM3_1556	SpyM3_1557	cycC	cycD	TRUE	0.997	-7.000	0.576	0.006	N	NA
270259	270260	SpyM3_1557	SpyM3_1558	cycD	fhuC.2	TRUE	0.862	0.000	0.047	1.000	N	NA
270260	270261	SpyM3_1558	SpyM3_1559	fhuC.2	fhuG.2	TRUE	0.995	-3.000	0.657	1.000	Y	NA
270261	270262	SpyM3_1559	SpyM3_1560	fhuG.2	fhuD.2	TRUE	0.995	2.000	0.877	1.000	Y	NA
270262	270263	SpyM3_1560	SpyM3_1561	fhuD.2		FALSE	0.078	197.000	0.000	1.000		NA
270263	270264	SpyM3_1561	SpyM3_1562		isp.2	FALSE	0.026	475.000	0.000	NA		NA
270264	270265	SpyM3_1562	SpyM3_1563	isp.2	alr	FALSE	0.285	117.000	0.022	NA		NA
270265	270266	SpyM3_1563	SpyM3_1564	alr	acpS	TRUE	0.912	-3.000	0.093	1.000	N	NA
270266	270267	SpyM3_1564	SpyM3_1565	acpS	secA	FALSE	0.134	116.000	0.008	1.000	N	NA
270267	270268	SpyM3_1565	SpyM3_1566	secA	pmi	FALSE	0.132	134.000	0.042	1.000	N	NA
270268	270269	SpyM3_1566	SpyM3_1567	pmi	scrK	TRUE	0.819	95.000	0.333	1.000	Y	NA
270269	270270	SpyM3_1567	SpyM3_1568	scrK	ndoS	FALSE	0.046	264.000	0.000	1.000		NA
270270	270271	SpyM3_1568	SpyM3_1569	ndoS	scrA	FALSE	0.058	231.000	0.000	1.000		NA
270272	270273	SpyM3_1570	SpyM3_1571	scrB	scrR	TRUE	0.607	125.000	0.571	1.000	N	NA
270274	270275	SpyM3_1572	SpyM3_1573	nusB		TRUE	0.979	-7.000	0.265	NA		NA
270275	270276	SpyM3_1573	SpyM3_1574		efp	TRUE	0.738	46.000	0.031	NA		NA
270276	270277	SpyM3_1574	SpyM3_1575	efp	comEB	FALSE	0.181	96.000	0.005	1.000	N	NA
270277	270278	SpyM3_1575	SpyM3_1576	comEB	pepP	TRUE	0.609	35.000	0.018	1.000	N	NA
270278	270279	SpyM3_1576	SpyM3_1577	pepP	uvrA	FALSE	0.133	116.000	0.008	1.000	N	NA
270280	270281	SpyM3_1578	SpyM3_1579			FALSE	0.274	132.000	0.072	NA		NA
270282	270283	SpyM3_1580	SpyM3_1581	rpsR	ssb.2	FALSE	0.079	165.000	0.012	1.000	N	NA
270283	270284	SpyM3_1581	SpyM3_1582	ssb.2	rpsF	TRUE	0.650	22.000	0.012	1.000	N	NA
270284	270285	SpyM3_1582	SpyM3_1583	rpsF		FALSE	0.119	173.000	0.000	NA		NA
270286	270287	SpyM3_1584	SpyM3_1585	mutY		FALSE	0.058	177.000	0.002	1.000	N	NA
270288	270289	SpyM3_1586	SpyM3_1587	trx.2		TRUE	0.484	81.000	0.053	1.000		NA
270289	270290	SpyM3_1587	SpyM3_1588		mutS.1	TRUE	0.836	4.000	0.005	1.000		NA
270290	270291	SpyM3_1588	SpyM3_1589	mutS.1		TRUE	0.797	32.000	0.070	1.000		NA
270291	270292	SpyM3_1589	SpyM3_1590			TRUE	0.894	3.000	0.019	NA		NA
270293	270294	SpyM3_1591	SpyM3_1592		spi	TRUE	0.828	11.000	0.080	1.000	N	NA
270294	270295	SpyM3_1592	SpyM3_1593	spi	recD	TRUE	0.620	58.000	0.099	1.000	N	NA
270295	270296	SpyM3_1593	SpyM3_1594	recD		TRUE	0.456	92.000	0.050	NA		NA
270299	270300	SpyM3_1597	SpyM3_1598		cppA	TRUE	0.983	-15.000	0.326	NA		NA
270302	270303	SpyM3_1600	SpyM3_1601	glpF.2	norA	FALSE	0.197	403.000	0.000	0.029	Y	NA
270304	270305	SpyM3_1602	SpyM3_1603		pepXP	TRUE	0.839	22.000	0.081	1.000		NA
270307	270308	SpyM3_1605	SpyM3_1606			FALSE	0.116	193.000	0.002	NA		NA
270309	270310	SpyM3_1607	SpyM3_1608		dnaQ	FALSE	0.207	153.000	0.156	1.000	N	NA
270310	270311	SpyM3_1608	SpyM3_1609	dnaQ		TRUE	0.894	10.000	0.057	NA		NA
270313	270314	SpyM3_1611	SpyM3_1612	deoC	nupC	TRUE	0.963	30.000	0.333	1.000	Y	NA
270314	270315	SpyM3_1612	SpyM3_1613	nupC	udp	TRUE	0.901	21.000	0.015	1.000	Y	NA
270316	270317	SpyM3_1614	SpyM3_1615		rpsN.2	FALSE	0.033	220.000	0.000	1.000	N	NA
270318	270319	SpyM3_1616	SpyM3_1617	gcp		TRUE	0.888	-10.000	0.000	1.000		NA
270319	270320	SpyM3_1617	SpyM3_1618			TRUE	0.889	-28.000	0.000	1.000		NA
270321	270322	SpyM3_1619	SpyM3_1620			TRUE	0.986	2.000	0.576	NA		NA
270323	270324	SpyM3_1621	SpyM3_1622	glnA	glnR	TRUE	0.803	38.000	0.179	1.000	N	NA
270324	270325	SpyM3_1622	SpyM3_1623	glnR		TRUE	0.750	67.000	0.154	NA		NA
270325	270326	SpyM3_1623	SpyM3_1624		pgk	FALSE	0.068	263.000	0.002	NA		NA
270326	270327	SpyM3_1624	SpyM3_1625	pgk	lppC	FALSE	0.092	193.000	0.003	1.000		NA
270327	270328	SpyM3_1625	SpyM3_1626	lppC		FALSE	0.059	230.000	0.000	1.000		NA
270328	270329	SpyM3_1626	SpyM3_1627			FALSE	0.069	237.000	0.006	1.000		NA
270329	270330	SpyM3_1627	SpyM3_1628		asp	TRUE	0.962	33.000	0.567	NA		NA
270330	270331	SpyM3_1628	SpyM3_1629	asp	rpmB	FALSE	0.207	152.000	0.044	NA		NA
270331	270332	SpyM3_1629	SpyM3_1630	rpmB	fba	FALSE	0.012	382.000	0.000	1.000	N	NA
270332	400266	SpyM3_1630	SpyM3_t59	fba	tRNA-Leu	FALSE	0.093	208.000	0.000	NA		NA
400266	270333	SpyM3_t59	SpyM3_1631	tRNA-Leu		TRUE	0.600	54.000	0.000	NA		NA
270333	270334	SpyM3_1631	SpyM3_1632		pyrG	FALSE	0.107	168.000	0.002	1.000		NA
270334	270335	SpyM3_1632	SpyM3_1633	pyrG	rpoE	FALSE	0.048	257.000	0.029	1.000	N	NA
270335	270336	SpyM3_1633	SpyM3_1634	rpoE	ropA	FALSE	0.046	217.000	0.005	1.000	N	NA
270338	270339	SpyM3_1636	SpyM3_1637			TRUE	0.913	14.000	0.149	NA		NA
270339	270340	SpyM3_1637	SpyM3_1638		thiD	TRUE	0.829	68.000	0.276	NA		NA
270340	270341	SpyM3_1638	SpyM3_1639	thiD	truA	TRUE	0.907	-10.000	0.058	1.000	N	NA
270341	270342	SpyM3_1639	SpyM3_1640	truA	comX.2	FALSE	0.084	187.000	0.000	1.000		NA
270342	400265	SpyM3_1640	SpyM3_t60	comX.2	tRNA-Arg	FALSE	0.330	92.000	0.000	NA		NA
400265	400264	SpyM3_t60	SpyM3_t61	tRNA-Arg	tRNA-Asn	TRUE	0.414	80.000	0.000	NA		NA
400264	2179449	SpyM3_t61	SpyM3_r18	tRNA-Asn		TRUE	0.839	6.000	0.000	NA		NA
2179449	2179450	SpyM3_r18	SpyM3_r11			FALSE	0.388	82.000	0.000	NA		NA
2179450	400263	SpyM3_r11	SpyM3_t62		tRNA-Ala	FALSE	0.050	296.000	0.000	NA		NA
400263	2179451	SpyM3_t62	SpyM3_r12	tRNA-Ala		TRUE	0.656	45.000	0.000	NA		NA
2179451	270343	SpyM3_r12	SpyM3_1641			FALSE	0.031	388.000	0.000	NA		NA
270344	270345	SpyM3_1642	SpyM3_1643	hsdR	hsdS	TRUE	0.982	13.000	0.000	0.001	Y	NA
270345	270346	SpyM3_1643	SpyM3_1644	hsdS	hsdM	TRUE	0.964	13.000	0.000	0.048	Y	NA
270347	270348	SpyM3_1645	SpyM3_1646	salR	salK	TRUE	0.997	-19.000	0.704	NA	Y	NA
270348	270349	SpyM3_1646	SpyM3_1647	salK	salY	FALSE	0.113	181.000	0.000	NA		NA
270349	270350	SpyM3_1647	SpyM3_1648	salY	salX	FALSE	0.082	190.000	0.000	1.000		NA
270350	270351	SpyM3_1648	SpyM3_1649	salX	salT	TRUE	0.952	-3.000	0.000	1.000	Y	NA
270351	270352	SpyM3_1649	SpyM3_1650	salT		TRUE	0.922	15.000	0.000	0.049		NA
270352	270353	SpyM3_1650	SpyM3_1651		salB	TRUE	0.889	-22.000	0.000	1.000		NA
270353	270354	SpyM3_1651	SpyM3_1652	salB	salA	FALSE	0.312	83.000	0.000	1.000		NA
270354	270355	SpyM3_1652	SpyM3_1653	salA	lacG	FALSE	0.018	515.000	0.000	1.000		NA
270355	270356	SpyM3_1653	SpyM3_1654	lacG	lacE	TRUE	0.661	73.000	0.000	1.000	Y	NA
270356	270357	SpyM3_1654	SpyM3_1655	lacE	lacF	TRUE	0.993	0.000	0.150	0.012	Y	NA
270357	270358	SpyM3_1655	SpyM3_1656	lacF	lacD.2	TRUE	0.985	24.000	0.667	1.000	Y	NA
270358	270359	SpyM3_1656	SpyM3_1657	lacD.2	lacC.2	TRUE	0.986	4.000	0.000	0.002	Y	NA
270359	270360	SpyM3_1657	SpyM3_1658	lacC.2	lacB.2	TRUE	0.800	46.000	0.000	1.000	Y	NA
270360	270361	SpyM3_1658	SpyM3_1659	lacB.2	lacA.2	TRUE	0.966	35.000	0.000	0.002	Y	NA
270362	270363	SpyM3_1660	SpyM3_1661	lacR.2		FALSE	0.021	650.000	0.000	NA		NA
270363	270364	SpyM3_1661	SpyM3_1662			TRUE	0.913	-10.000	0.000	NA		NA
270365	270366	SpyM3_1663	SpyM3_1664	rpsI	rplM	TRUE	0.995	21.000	0.601	0.022	Y	NA
270366	270367	SpyM3_1664	SpyM3_1665	rplM		FALSE	0.034	218.000	0.000	1.000	N	NA
270367	270368	SpyM3_1665	SpyM3_1666			TRUE	0.939	-3.000	0.051	NA		NA
270368	270369	SpyM3_1666	SpyM3_1667			FALSE	0.175	127.000	0.000	NA		NA
270369	270370	SpyM3_1667	SpyM3_1668			TRUE	0.406	97.000	0.036	NA		NA
270370	270371	SpyM3_1668	SpyM3_1669			TRUE	0.927	4.000	0.109	NA		NA
270371	270372	SpyM3_1669	SpyM3_1670			TRUE	0.668	47.000	0.003	NA		NA
270372	270373	SpyM3_1670	SpyM3_1671			FALSE	0.102	196.000	0.000	NA		NA
270373	270374	SpyM3_1671	SpyM3_1672		cysS	TRUE	0.954	-7.000	0.129	1.000		NA
270374	270375	SpyM3_1672	SpyM3_1673	cysS		TRUE	0.752	28.000	0.002	NA		NA
270375	270376	SpyM3_1673	SpyM3_1674		cysE	FALSE	0.026	479.000	0.000	NA		NA
270376	270377	SpyM3_1674	SpyM3_1675	cysE		TRUE	0.916	9.000	0.097	NA		NA
270377	270378	SpyM3_1675	SpyM3_1676		pnp	TRUE	0.928	-7.000	0.009	NA		NA
270378	270379	SpyM3_1676	SpyM3_1677	pnp		FALSE	0.021	281.000	0.000	1.000	N	NA
270379	270380	SpyM3_1677	SpyM3_1678			TRUE	0.851	13.000	0.056	1.000		NA
270380	270381	SpyM3_1678	SpyM3_1679			TRUE	0.974	27.000	0.241	0.020		NA
270381	270382	SpyM3_1679	SpyM3_1680			TRUE	0.980	-7.000	0.048	0.012	N	NA
270382	270383	SpyM3_1680	SpyM3_1681		rpsO	FALSE	0.015	352.000	0.000	1.000	N	NA
270383	270384	SpyM3_1681	SpyM3_1682	rpsO		FALSE	0.117	176.000	0.000	NA		NA
270385	270386	SpyM3_1683	SpyM3_1684		def	FALSE	0.282	101.000	0.000	NA		NA
270387	270388	SpyM3_1685	SpyM3_1686			TRUE	0.552	131.000	0.414	1.000		NA
270388	270389	SpyM3_1686	SpyM3_1687		polC	FALSE	0.182	110.000	0.020	1.000	N	NA
270389	270390	SpyM3_1687	SpyM3_1688	polC	proS	FALSE	0.214	254.000	0.070	0.043	N	NA
270390	270391	SpyM3_1688	SpyM3_1689	proS	eep	FALSE	0.115	198.000	0.095	1.000	N	NA
270391	270392	SpyM3_1689	SpyM3_1690	eep	cdsA	TRUE	0.417	73.000	0.040	1.000	N	NA
270392	270393	SpyM3_1690	SpyM3_1691	cdsA	uppS	TRUE	0.946	13.000	0.113	1.000	Y	NA
270393	270394	SpyM3_1691	SpyM3_1692	uppS		FALSE	0.065	219.000	0.007	NA	N	NA
270394	270395	SpyM3_1692	SpyM3_1693			FALSE	0.169	116.000	0.006	NA	N	NA
270395	270396	SpyM3_1693	SpyM3_1694		pulA	FALSE	0.089	142.000	0.000	NA	N	NA
270396	270397	SpyM3_1694	SpyM3_1695	pulA	dexB	TRUE	0.616	198.000	0.049	0.006	Y	NA
270397	270398	SpyM3_1695	SpyM3_1696	dexB	msmK	TRUE	0.532	129.000	0.171	1.000	Y	NA
270398	270399	SpyM3_1696	SpyM3_1697	msmK	lrp	FALSE	0.049	298.000	0.071	1.000	N	NA
270401	270402	SpyM3_1699	SpyM3_1700		dtd	TRUE	0.912	-9.000	0.000	NA		NA
270402	270403	SpyM3_1700	SpyM3_1701	dtd	relA	TRUE	0.874	15.000	0.177	1.000	N	NA
270403	270404	SpyM3_1701	SpyM3_1702	relA	sclA	FALSE	0.034	309.000	0.000	1.000		NA
270404	270405	SpyM3_1702	SpyM3_1703	sclA	sclA	FALSE	0.138	151.000	0.000	NA		NA
270406	270407	SpyM3_1704	SpyM3_1705			TRUE	0.842	5.000	0.000	NA		NA
270407	270408	SpyM3_1705	SpyM3_1706		nrdI.1	TRUE	0.697	35.000	0.000	NA		NA
270409	270410	SpyM3_1707	SpyM3_1708	rgfB		TRUE	0.882	79.000	0.610	1.000		NA
270410	270411	SpyM3_1708	SpyM3_1709			FALSE	0.035	362.000	0.000	NA		NA
270411	270412	SpyM3_1709	SpyM3_1710		prmA	TRUE	0.968	0.000	0.227	NA		NA
270412	270413	SpyM3_1710	SpyM3_1711	prmA		TRUE	0.566	71.000	0.013	NA		NA
270414	270415	SpyM3_1712	SpyM3_1713	pabP	trpG	TRUE	0.863	33.000	0.009	1.000	Y	NA
270415	270416	SpyM3_1713	SpyM3_1714	trpG		TRUE	0.654	33.000	0.035	1.000	N	NA
270416	400258	SpyM3_1714	SpyM3_t63		tRNA-Lys	FALSE	0.053	286.000	0.000	NA		NA
400258	270417	SpyM3_t63	SpyM3_1715	tRNA-Lys		FALSE	0.056	276.000	0.000	NA		NA
270417	270418	SpyM3_1715	SpyM3_1716			TRUE	0.983	-39.000	0.000	0.005		NA
270420	270421	SpyM3_1718	SpyM3_1719	dppA	dppB	TRUE	0.409	227.000	0.000	0.029	Y	NA
270421	270422	SpyM3_1719	SpyM3_1720	dppB	dppC	TRUE	0.999	-3.000	1.000	0.029	Y	NA
270422	270423	SpyM3_1720	SpyM3_1721	dppC	dppD	TRUE	0.977	12.000	0.333	1.000	Y	NA
270423	270424	SpyM3_1721	SpyM3_1722	dppD	dppE	TRUE	0.999	-16.000	0.750	0.018	Y	NA
270425	270426	SpyM3_1723	SpyM3_1724			FALSE	0.122	169.000	0.000	NA		NA
270426	270427	SpyM3_1724	SpyM3_1725		lmb	TRUE	0.986	13.000	0.800	NA		NA
270427	270428	SpyM3_1725	SpyM3_1726	lmb	scpA	FALSE	0.047	263.000	0.000	1.000		NA
270428	270429	SpyM3_1726	SpyM3_1727	scpA	emm3	FALSE	0.149	370.000	0.000	0.006		NA
270429	270430	SpyM3_1727	SpyM3_1728	emm3	mga	FALSE	0.112	184.000	0.000	NA		NA
270432	270433	SpyM3_1730	SpyM3_1731		isp.1	TRUE	0.948	78.000	1.000	NA		NA
270433	270434	SpyM3_1731	SpyM3_1732	isp.1		TRUE	0.534	102.000	0.200	1.000		NA
270434	270435	SpyM3_1732	SpyM3_1733			TRUE	0.993	-3.000	0.500	1.000	Y	NA
270435	270436	SpyM3_1733	SpyM3_1734			TRUE	0.571	94.000	0.267	1.000	N	NA
270436	270437	SpyM3_1734	SpyM3_1735			TRUE	0.982	13.000	0.467	1.000	Y	NA
270437	270438	SpyM3_1735	SpyM3_1736			TRUE	0.982	-13.000	0.385	NA	N	NA
270438	270439	SpyM3_1736	SpyM3_1737			FALSE	0.144	423.000	0.333	NA		NA
270439	270440	SpyM3_1737	SpyM3_1738			TRUE	0.735	27.000	0.000	NA		NA
270442	270443	SpyM3_1740	SpyM3_1741	prtM.2		FALSE	0.019	480.000	0.000	1.000		NA
270443	270444	SpyM3_1741	SpyM3_1742		speB	TRUE	0.977	2.000	0.000	0.001		NA
270444	270445	SpyM3_1742	SpyM3_1743	speB		FALSE	0.058	272.000	0.000	NA		NA
270449	270450	SpyM3_1747	SpyM3_1748	gldA	mipB	TRUE	0.762	57.000	0.211	1.000	N	NA
270450	270451	SpyM3_1748	SpyM3_1749	mipB	pflD	TRUE	0.942	13.000	0.368	1.000	N	NA
270451	270452	SpyM3_1749	SpyM3_1750	pflD		FALSE	0.122	211.000	0.132	1.000	N	NA
270452	270453	SpyM3_1750	SpyM3_1751			TRUE	0.998	10.000	0.889	0.012	Y	NA
270453	270454	SpyM3_1751	SpyM3_1752			TRUE	0.997	28.000	0.889	0.012	Y	NA
270454	270455	SpyM3_1752	SpyM3_1753			FALSE	0.059	288.000	0.091	1.000	N	NA
270455	270456	SpyM3_1753	SpyM3_1754			TRUE	0.956	16.000	0.188	1.000	Y	NA
270457	270458	SpyM3_1755	SpyM3_1756			TRUE	0.697	35.000	0.000	NA		NA
270459	270460	SpyM3_1757	SpyM3_1758		pbp2A	FALSE	0.035	215.000	0.000	1.000	N	NA
270460	270461	SpyM3_1758	SpyM3_1759	pbp2A		FALSE	0.304	105.000	0.062	NA	N	NA
270462	270463	SpyM3_1760	SpyM3_1761			TRUE	0.756	47.000	0.056	NA		NA
270466	270467	SpyM3_1764	SpyM3_1765		groEL	FALSE	0.052	251.000	0.000	1.000		NA
270467	270468	SpyM3_1765	SpyM3_1766	groEL	groES	TRUE	0.980	36.000	0.160	0.006	Y	NA
270468	270469	SpyM3_1766	SpyM3_1767	groES	clpC	FALSE	0.290	178.000	0.036	1.000	Y	NA
270469	270470	SpyM3_1767	SpyM3_1768	clpC	ctsR	TRUE	0.947	0.000	0.188	NA	N	NA
270470	270471	SpyM3_1768	SpyM3_1769	ctsR	csp	FALSE	0.271	196.000	0.013	NA	Y	NA
270471	400262	SpyM3_1769	SpyM3_t64	csp	tRNA-Cys	FALSE	0.024	510.000	0.000	NA		NA
270472	270473	SpyM3_1770	SpyM3_1771	ahpC	nox.3	TRUE	0.982	21.000	0.551	1.000	Y	NA
270475	270476	SpyM3_1773	SpyM3_1774	hutU		TRUE	0.686	88.000	0.086	1.000	Y	NA
270476	270477	SpyM3_1774	SpyM3_1775			TRUE	0.956	11.000	0.143	1.000	Y	NA
270477	270478	SpyM3_1775	SpyM3_1776		fhs.2	TRUE	0.735	18.000	0.038	1.000	N	NA
270478	270479	SpyM3_1776	SpyM3_1777	fhs.2		TRUE	0.834	22.000	0.038	NA		NA
270479	270480	SpyM3_1777	SpyM3_1778			FALSE	0.143	220.000	0.062	NA		NA
270480	270481	SpyM3_1778	SpyM3_1779		hutH	TRUE	0.917	11.000	0.006	1.000	Y	NA
270481	270482	SpyM3_1779	SpyM3_1780	hutH	hutG	TRUE	0.602	187.000	0.000	0.002	Y	NA
270484	270485	SpyM3_1782	SpyM3_1783	rpsB	tsf	TRUE	0.823	134.000	0.748	1.000	Y	NA
270486	270487	SpyM3_1784	SpyM3_1785	pepO	dexS	FALSE	0.038	208.000	0.000	1.000	N	NA
270487	270488	SpyM3_1785	SpyM3_1786	dexS		TRUE	0.955	67.000	0.650	1.000	Y	NA
270491	270492	SpyM3_1789	SpyM3_1790			FALSE	0.183	135.000	0.007	NA		NA
270493	270494	SpyM3_1791	SpyM3_1792	nrdG		TRUE	0.900	15.000	0.159	1.000		NA
270494	270495	SpyM3_1792	SpyM3_1793			TRUE	0.867	9.000	0.041	1.000		NA
270495	270496	SpyM3_1793	SpyM3_1794		nrdD	FALSE	0.028	357.000	0.000	1.000		NA
270496	270497	SpyM3_1794	SpyM3_1795	nrdD		TRUE	0.429	98.000	0.057	NA		NA
270497	270498	SpyM3_1795	SpyM3_1796			FALSE	0.029	413.000	0.000	NA		NA
270498	270499	SpyM3_1796	SpyM3_1797			TRUE	0.981	12.000	0.651	NA		NA
270499	270500	SpyM3_1797	SpyM3_1798			TRUE	0.981	6.000	0.537	NA		NA
270500	270501	SpyM3_1798	SpyM3_1799			FALSE	0.319	113.000	0.032	NA		NA
270501	270502	SpyM3_1799	SpyM3_1800		recA	FALSE	0.026	291.000	0.004	1.000	N	NA
270502	270503	SpyM3_1800	SpyM3_1801	recA	cinA	FALSE	0.247	131.000	0.083	1.000		NA
270503	270504	SpyM3_1801	SpyM3_1802	cinA	tag	TRUE	0.504	69.000	0.011	1.000		NA
270504	270505	SpyM3_1802	SpyM3_1803	tag	ruvA	TRUE	0.927	10.000	0.012	1.000	Y	NA
270505	270506	SpyM3_1803	SpyM3_1804	ruvA	lmrP	TRUE	0.851	2.000	0.005	1.000		NA
270506	270507	SpyM3_1804	SpyM3_1805	lmrP	mutL	TRUE	0.806	11.000	0.006	1.000		NA
270507	270508	SpyM3_1805	SpyM3_1806	mutL	mutS.2	TRUE	0.867	129.000	0.220	0.002	Y	NA
270508	270509	SpyM3_1806	SpyM3_1807	mutS.2		TRUE	0.943	-13.000	0.031	NA		NA
270509	270510	SpyM3_1807	SpyM3_1808		ahrC	FALSE	0.230	143.000	0.054	NA		NA
270511	270512	SpyM3_1809	SpyM3_1810	argS		TRUE	0.461	88.000	0.032	NA		NA
270513	270514	SpyM3_1811	SpyM3_1812			TRUE	0.963	43.000	0.667	NA		NA
270514	270515	SpyM3_1812	SpyM3_1813			TRUE	0.907	20.000	0.156	NA		NA
270515	270516	SpyM3_1813	SpyM3_1814		aspS	TRUE	0.935	-7.000	0.016	NA		NA
270516	270517	SpyM3_1814	SpyM3_1815	aspS	hisS	FALSE	0.381	338.000	0.161	0.042	Y	NA
270518	270519	SpyM3_1816	SpyM3_1817	rpmF	rpmG	TRUE	0.972	16.000	0.012	0.028	Y	NA
270519	270520	SpyM3_1817	SpyM3_1818	rpmG	cadD	FALSE	0.032	281.000	0.000	NA	N	NA
270520	270521	SpyM3_1818	SpyM3_1819	cadD	cadX	TRUE	0.985	12.000	0.875	NA	N	NA
270521	270522	SpyM3_1819	SpyM3_1820	cadX		TRUE	0.937	51.000	0.571	1.000		NA
270522	270523	SpyM3_1820	SpyM3_1821			TRUE	0.865	66.000	0.400	1.000		NA
270523	270524	SpyM3_1821	SpyM3_1822			TRUE	0.995	-3.000	1.000	NA		NA
270525	270526	SpyM3_1823	SpyM3_1824			FALSE	0.041	328.000	0.000	NA		NA
270528	270529	SpyM3_1826	SpyM3_1827			FALSE	0.164	131.000	0.000	NA		NA
270530	270531	SpyM3_1828	SpyM3_1829			TRUE	0.982	-13.000	0.300	NA		NA
270531	270532	SpyM3_1829	SpyM3_1830			TRUE	0.982	-3.000	0.350	NA		NA
270535	270536	SpyM3_1833	SpyM3_1834	rpsD		FALSE	0.020	730.000	0.000	NA		NA
270536	270537	SpyM3_1834	SpyM3_1835		dnaC	TRUE	0.844	17.000	0.030	NA		NA
270537	270538	SpyM3_1835	SpyM3_1836	dnaC	rplI	TRUE	0.759	30.000	0.100	1.000	N	NA
270538	270539	SpyM3_1836	SpyM3_1837	rplI		TRUE	0.923	-3.000	0.119	1.000	N	NA
270539	270540	SpyM3_1837	SpyM3_1838		gidA	FALSE	0.233	90.000	0.011	1.000	N	NA
270540	270541	SpyM3_1838	SpyM3_1839	gidA		FALSE	0.173	124.000	0.005	1.000		NA
270541	270542	SpyM3_1839	SpyM3_1840		trmU	FALSE	0.017	776.000	0.003	1.000		NA
270543	270544	SpyM3_1841	SpyM3_1842	sdhB	sdhA	TRUE	0.993	12.000	0.221	0.001	Y	NA
270545	270546	SpyM3_1843	SpyM3_1844			FALSE	0.024	371.000	0.000	1.000		NA
270546	270547	SpyM3_1844	SpyM3_1845			TRUE	0.979	-7.000	0.136	1.000	Y	NA
270547	270548	SpyM3_1845	SpyM3_1846			TRUE	0.999	-24.000	0.713	0.018	Y	NA
270548	270549	SpyM3_1846	SpyM3_1847		pgsA	TRUE	0.800	2.000	0.015	1.000	N	NA
270549	270550	SpyM3_1847	SpyM3_1848	pgsA		TRUE	0.862	14.000	0.077	1.000		NA
270550	270551	SpyM3_1848	SpyM3_1849			TRUE	0.797	50.000	0.156	1.000		NA
270551	270552	SpyM3_1849	SpyM3_1850			TRUE	0.998	2.000	0.872	0.004		NA
270553	270554	SpyM3_1851	SpyM3_1852	hasA	hasB	TRUE	0.880	36.000	0.048	1.000	Y	NA
270554	270555	SpyM3_1852	SpyM3_1853	hasB	hasC	FALSE	0.217	182.000	0.000	1.000	Y	NA
270555	270556	SpyM3_1853	SpyM3_1854	hasC		FALSE	0.035	308.000	0.000	1.000		NA
270556	270557	SpyM3_1854	SpyM3_1855		recF	TRUE	0.951	2.000	0.209	1.000		NA
270558	270559	SpyM3_1856	SpyM3_1857		guaB	FALSE	0.030	233.000	0.000	1.000	N	NA
270559	270560	SpyM3_1857	SpyM3_1858	guaB	trsA	FALSE	0.021	308.000	0.002	1.000	N	NA
270561	270562	SpyM3_1859	SpyM3_1860			TRUE	0.529	79.000	0.027	NA		NA
270562	270563	SpyM3_1860	SpyM3_1861			TRUE	0.494	83.000	0.040	NA		NA
270566	270567	SpyM3_1864	SpyM3_1865	degP	spoJ	FALSE	0.255	89.000	0.015	1.000	N	NA
270567	268703	SpyM3_1865	SpyM3_0001	spoJ	dnaA	FALSE	0.036	233.000	0.002	1.000	N	NA