MicrobesOnline Operon Predictions for Shigella flexneri 2a str. 2457T

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 362682 362683 S0001 S0002 thrL thrA FALSE 0.219 81.000 0.043 1.000   NA
 362683 362684 S0002 S0003 thrA thrB TRUE 0.988 2.000 0.133 1.000 Y NA
 362684 362685 S0003 S0004 thrB thrC TRUE 0.993 1.000 0.233 1.000 Y NA
 362685 362686 S0004 S0005 thrC   FALSE 0.039 223.000 0.003 NA   NA
 362687 2179031 S0006 S0007 yaaA yaaJ FALSE 0.204 70.000 0.000 NA   NA
 362688 362689 S0008 S0009 talB mog FALSE 0.170 115.000 0.042 1.000 N NA
 362690 362691 S0010 S0012 yaaH   FALSE 0.189 149.000 0.043 NA   NA
 362691 362693 S0012 S0013   yaaI TRUE 0.910 26.000 0.500 NA   NA
 362694 362695 S0014 S0015 dnaK dnaJ TRUE 0.916 89.000 0.236 0.004 Y NA
 2179032 362697 S0016 S0018 sokC nhaA FALSE 0.009 483.000 0.000 NA   NA
 362697 362698 S0018 S0019 nhaA nhaR TRUE 0.571 66.000 0.292 1.000 N NA
 362699 362700 S0020 S0021     TRUE 0.992 -81.000 0.000 NA Y NA
 362700 362701 S0021 S0022   rpsT FALSE 0.009 389.000 0.000 NA N NA
 362702 362703 S0023 S0024   ribF TRUE 0.779 8.000 0.019 NA   NA
 362703 362704 S0024 S0025 ribF ileS TRUE 0.678 43.000 0.254 1.000 N NA
 362704 362705 S0025 S0026 ileS lspA TRUE 0.858 0.000 0.045 1.000 N NA
 362705 362706 S0026 S0027 lspA slpA FALSE 0.352 87.000 0.154 1.000 N NA
 362706 362707 S0027 S0028 slpA lytB TRUE 0.989 2.000 0.626 1.000 N NA
 362707 362708 S0028 S0029 lytB yaaF FALSE 0.136 66.000 0.028 1.000 N NA
 362708 362709 S0029 S0030 yaaF dapB FALSE 0.068 167.000 0.003 1.000 N NA
 362709 362710 S0030 S0031 dapB carA FALSE 0.061 456.000 0.034 1.000 Y NA
 362710 362711 S0031 S0032 carA carB TRUE 0.991 18.000 0.345 0.001 Y NA
 362711 362712 S0032 S0033 carB caiF FALSE 0.043 262.000 0.000 NA   NA
 362713 362714 S0034 S0035 caiE caiD TRUE 0.938 -15.000 0.000 1.000   NA
 362714 362715 S0035 S0036 caiD caiC TRUE 0.992 1.000 0.000 0.023 Y NA
 362715 362716 S0036 S0037 caiC caiB TRUE 0.635 59.000 0.154 0.023 N NA
 362716 362717 S0037 S0038 caiB caiA TRUE 0.743 129.000 0.529 1.000 N NA
 362717 362718 S0038 S0039 caiA caiT TRUE 0.559 31.000 0.118 1.000 N NA
 362719 2179033 S0040 S0041 fixA fixB TRUE 0.665 15.000 0.000 NA   NA
 2179033 362720 S0041 S0042 fixB fixC FALSE 0.287 51.000 0.000 NA   NA
 362720 362721 S0042 S0043 fixC fixX TRUE 0.996 -3.000 0.167 0.055 Y NA
 362721 362722 S0043 S0044 fixX yaaU FALSE 0.199 59.000 0.000 1.000 N NA
 362722 362723 S0044 S0045 yaaU yabF FALSE 0.338 48.000 0.000 1.000   NA
 362723 362724 S0045 S0046 yabF kefC TRUE 0.993 -7.000 0.560 1.000   NA
 362724 362725 S0046 S0047 kefC folA FALSE 0.053 191.000 0.012 1.000 N NA
 362726 362727 S0048 S0049 apaH apaG TRUE 0.958 7.000 0.267 NA N NA
 362727 362728 S0049 S0050 apaG ksgA TRUE 0.867 3.000 0.078 NA N NA
 362728 362729 S0050 S0051 ksgA pdxA TRUE 0.965 -3.000 0.197 1.000 N NA
 362729 362730 S0051 S0052 pdxA surA TRUE 0.989 0.000 0.561 1.000 N NA
 362730 362731 S0052 S0053 surA imp TRUE 0.494 53.000 0.182 1.000 N NA
 362733 362734 S0055 S0056 yabO hepA TRUE 0.940 12.000 0.294 1.000 N NA
 362734 362735 S0056 S0057 hepA polB TRUE 0.663 165.000 0.098 1.000 Y NA
 362735 362736 S0057 S0058 polB araD FALSE 0.109 75.000 0.018 1.000 N NA
 362736 362737 S0058 S0059 araD araA FALSE 0.407 200.000 0.017 1.000 Y NA
 362737 362738 S0059 S0060 araA araB TRUE 0.882 11.000 0.138 1.000 N NA
 362739 362740 S0061 S0062 araC yabI FALSE 0.403 86.000 0.167 NA   NA
 362741 362742 S0063 S0064 yabJ yabK TRUE 0.996 -16.000 0.522 0.016 N NA
 362742 362743 S0064 S0065 yabK tbpA TRUE 0.997 -24.000 0.697 0.071 N NA
 362743 362744 S0065 S0066 tbpA yabN FALSE 0.331 164.000 0.010 0.071   NA
 362746 362747 S0068 S0069 leuD leuC TRUE 0.996 11.000 0.309 0.001 Y NA
 362747 362748 S0069 S0070 leuC leuB TRUE 0.997 3.000 0.275 0.002 Y NA
 362748 362749 S0070 S0071 leuB leuA TRUE 0.995 0.000 0.126 0.002 Y NA
 362749 362750 S0071 S0072 leuA leuL TRUE 0.486 93.000 0.010 0.002   NA
 362751 362752 S0073 S0074 leuO ilvI FALSE 0.021 318.000 0.000 1.000 N NA
 362752 362753 S0074 S0075 ilvI ilvH TRUE 0.998 3.000 0.371 0.002 Y NA
 362753 362754 S0075 S0076 ilvH fruL TRUE 0.717 13.000 0.000 NA   NA
 362754 362755 S0076 S0077 fruL fruR FALSE 0.202 82.000 0.000 NA   NA
 362755 362756 S0077 S0078 fruR   FALSE 0.152 123.000 0.000 NA N NA
 362756 362757 S0078 S0079     TRUE 0.992 -81.000 0.000 NA Y NA
 362757 362758 S0079 S0080   yabB FALSE 0.007 559.000 0.000 NA   NA
 362758 362759 S0080 S0081 yabB yabC TRUE 0.991 2.000 0.635 NA   NA
 362759 362760 S0081 S0082 yabC ftsL TRUE 0.971 -3.000 0.227 1.000 N NA
 362760 362761 S0082 S0083 ftsL ftsI TRUE 0.757 16.000 0.124 1.000 N NA
 362761 362762 S0083 S0084 ftsI murE TRUE 0.991 -13.000 0.059 1.000 Y NA
 362762 362763 S0084 S0085 murE murF TRUE 0.999 -3.000 0.569 0.002 Y NA
 362763 362764 S0085 S0086 murF mraY TRUE 0.998 -6.000 0.309 0.004 Y NA
 362764 362765 S0086 S0087 mraY murD TRUE 0.999 3.000 0.647 0.004 Y NA
 362765 362766 S0087 S0088 murD ftsW TRUE 0.990 0.000 0.297 0.003 N NA
 362766 362767 S0088 S0089 ftsW murG TRUE 0.992 -3.000 0.647 1.000 N NA
 362767 362768 S0089 S0090 murG murC TRUE 0.890 54.000 0.283 1.000 Y NA
 362768 362769 S0090 S0091 murC ddlB TRUE 0.997 -7.000 0.153 0.004 Y NA
 362769 362770 S0091 S0092 ddlB ftsQ TRUE 0.995 2.000 0.372 NA Y NA
 362770 362771 S0092 S0093 ftsQ ftsA TRUE 0.983 -3.000 0.389 NA N NA
 362771 362772 S0093 S0094 ftsA ftsZ TRUE 0.918 61.000 0.460 1.000 Y NA
 362772 362773 S0094 S0095 ftsZ lpxC FALSE 0.328 101.000 0.134 1.000 N NA
 362773 362774 S0095 S0096 lpxC yacA FALSE 0.071 231.000 0.000 1.000   NA
 362774 362775 S0096 S0097 yacA secA FALSE 0.288 62.000 0.065 1.000   NA
 362775 362776 S0097 S0098 secA mutT TRUE 0.419 60.000 0.168 1.000 N NA
 362777 362778 S0099 S0100   yacG TRUE 0.938 -49.000 0.000 NA   NA
 362778 362779 S0100 S0101 yacG yacF TRUE 0.972 10.000 0.356 NA   NA
 362779 362780 S0101 S0102 yacF yacE TRUE 0.933 0.000 0.110 NA   NA
 362782 362783 S0104 S0105   hofC TRUE 0.843 8.000 0.000 NA   NA
 362783 2179034 S0105 S0106 hofC hofB TRUE 0.923 -10.000 0.000 NA   NA
 2179034 362784 S0106 S0107 hofB ppdD TRUE 0.827 10.000 0.000 NA   NA
 362784 362785 S0107 S0108 ppdD nadC FALSE 0.032 203.000 0.015 NA N NA
 362786 362787 S0109 S0110 ampD ampE TRUE 0.995 -3.000 0.249 1.000 Y NA
 362789 362790 S0112 S0113 pdhR aceE TRUE 0.484 161.000 0.276 1.000 N NA
 362790 362791 S0113 S0114 aceE aceF TRUE 0.973 15.000 0.220 1.000 Y NA
 362791 362792 S0114 S0115 aceF lpdA TRUE 0.478 325.000 0.463 1.000 Y NA
 362793 362794 S0117 S0118 acnB yacL FALSE 0.173 175.000 0.068 NA   NA
 362795 362796 S0119 S0120 speD speE TRUE 0.960 16.000 0.162 1.000 Y NA
 362796 362797 S0120 S0121 speE yacC TRUE 0.662 106.000 0.354 NA   NA
 362802 362803 S0126 S0127 yadG yadH TRUE 0.999 -3.000 0.688 0.089 Y NA
 362803 362804 S0127 S0128 yadH yadI FALSE 0.153 105.000 0.037 1.000 N NA
 362804 362805 S0128 S0129 yadI yadE TRUE 0.837 64.000 0.222 1.000 Y NA
 362808 362809 S0132 S0133 panC panB TRUE 0.996 12.000 0.395 0.001 Y NA
 362809 2179036 S0133 S0135 panB yadC FALSE 0.219 113.000 0.000 NA   NA
 362810 362811 S0134 S0136     TRUE 0.992 -81.000 0.000 NA Y NA
 362812 362813 S0137 S0138 folK pcnB TRUE 0.972 -3.000 0.234 1.000 N NA
 362813 362814 S0138 S0139 pcnB yadB TRUE 0.871 39.000 0.131 1.000 Y NA
 362814 362815 S0139 S0140 yadB dksA TRUE 0.502 67.000 0.231 1.000 N NA
 362815 362816 S0140 S0141 dksA sfsA FALSE 0.274 178.000 0.151 NA   NA
 362816 362817 S0141 S0142 sfsA yadP TRUE 0.655 15.000 0.045 NA   NA
 362818 362819 S0143 S0144 hrpB mrcB FALSE 0.204 196.000 0.158 1.000 N NA
 362819 362820 S0144 S0145 mrcB fhuA FALSE 0.059 220.000 0.000 1.000 N NA
 362820 362821 S0145 S0146 fhuA fhuC TRUE 0.841 51.000 0.156 1.000 Y NA
 362821 362822 S0146 S0147 fhuC fhuD TRUE 0.982 0.000 0.031 1.000 Y NA
 362822 362823 S0147 S0148 fhuD fhuB TRUE 0.986 -3.000 0.000 1.000 Y NA
 362825 362826 S0150 S0151 yadQ yadR FALSE 0.166 82.000 0.031 NA   NA
 362827 362828 S0152 S0153 yadS yadT TRUE 0.689 38.000 0.213 NA   NA
 362828 362829 S0153 S0154 yadT pfs TRUE 0.926 -7.000 0.073 1.000 N NA
 362830 362831 S0155 S0156 dgt htrA FALSE 0.286 130.000 0.101 1.000 N NA
 362831 2179037 S0156 S0157 htrA yaeG FALSE 0.183 155.000 0.000 NA   NA
 362832 362833 S0158 S0159 yaeH dapD FALSE 0.022 314.000 0.035 NA   NA
 362833 362834 S0159 S0160 dapD glnD TRUE 0.520 31.000 0.097 1.000 N NA
 362834 362835 S0160 S0161 glnD map TRUE 0.535 62.000 0.243 1.000 N NA
 362836 362837 S0162 S0163 rpsB tsf TRUE 0.758 258.000 0.748 1.000 Y NA
 362837 362838 S0163 S0164 tsf pyrH TRUE 0.667 147.000 0.416 1.000 N NA
 362838 362839 S0164 S0165 pyrH frr FALSE 0.307 292.000 0.626 1.000 N NA
 362839 362840 S0165 S0166 frr yaeM FALSE 0.132 92.000 0.032 1.000 N NA
 362840 362841 S0166 S0167 yaeM yaeS TRUE 0.477 186.000 0.025 1.000 Y NA
 362841 362842 S0167 S0168 yaeS cdsA TRUE 0.988 13.000 0.400 1.000 Y NA
 362842 362843 S0168 S0169 cdsA yaeL TRUE 0.783 12.000 0.080 1.000 N NA
 362843 362844 S0169 S0170 yaeL yaeT TRUE 0.932 30.000 0.204 1.000 Y NA
 362844 362845 S0170 S0171 yaeT hlpA TRUE 0.890 122.000 0.354 1.000 Y NA
 362845 362846 S0171 S0172 hlpA lpxD TRUE 0.998 4.000 0.814 1.000 Y NA
 362846 362847 S0172 S0173 lpxD fabZ TRUE 0.826 105.000 0.796 1.000 N NA
 362847 362848 S0173 S0174 fabZ lpxA TRUE 0.992 4.000 0.850 1.000 N NA
 362848 362849 S0174 S0175 lpxA lpxB TRUE 0.995 0.000 0.289 1.000 Y NA
 362849 362850 S0175 S0176 lpxB rnhB TRUE 0.963 -3.000 0.186 1.000 N NA
 362850 362851 S0176 S0177 rnhB dnaE TRUE 0.864 37.000 0.104 1.000 Y NA
 362851 362852 S0177 S0178 dnaE accA TRUE 0.811 13.000 0.122 1.000 N NA
 362852 362853 S0178 S0179 accA ldcC FALSE 0.100 99.000 0.010 1.000 N NA
 362853 362854 S0179 S0180 ldcC yaeR TRUE 0.708 57.000 0.039 1.000 Y NA
 362854 362855 S0180 S0181 yaeR mesJ FALSE 0.111 65.000 0.015 1.000 N NA
 362857 362858 S0183 S0184 yaeQ yaeJ TRUE 0.879 -3.000 0.034 NA   NA
 362858 362859 S0184 S0185 yaeJ cutF TRUE 0.622 14.000 0.027 NA   NA
 362860 362861 S0186 S0187 yaeF proS FALSE 0.167 53.000 0.002 NA   NA
 362861 362862 S0187 S0188 proS yaeB FALSE 0.219 111.000 0.048 NA   NA
 362862 362863 S0188 S0189 yaeB rcsF TRUE 0.975 -3.000 0.247 NA   NA
 362863 362864 S0189 S0190 rcsF yaeC TRUE 0.744 118.000 0.500 NA   NA
 362864 362865 S0190 S0191 yaeC yaeE TRUE 0.972 40.000 0.411 0.056 Y NA
 362865 362866 S0191 S0192 yaeE abc TRUE 0.998 -7.000 0.584 1.000 Y NA
 362867 408049 S0193 S0194 yaeD rrsH FALSE 0.017 364.000 0.000 NA   NA
 408049 400109 S0194 S0195 rrsH ileV FALSE 0.205 69.000 0.000 NA   NA
 400109 400110 S0195 S0196 ileV alaV FALSE 0.333 43.000 0.000 NA   NA
 400110 2179038 S0196 S0197 alaV rrlH FALSE 0.122 184.000 0.000 NA   NA
 2179038 406627 S0197 S0198 rrlH rrfH FALSE 0.201 95.000 0.000 NA   NA
 406627 400111 S0198 S0199 rrfH aspU FALSE 0.270 53.000 0.000 NA   NA
 400111 362868 S0199 S0200 aspU yafB FALSE 0.168 163.000 0.000 NA   NA
 362869 362870 S0201 S0202   yafC FALSE 0.174 68.000 0.000 1.000 N NA
 362871 362872 S0203 S0204 yafD yafE FALSE 0.079 228.000 0.066 NA   NA
 362873 362874 S0205 S0206 dniR gloB TRUE 0.542 72.000 0.233 1.000   NA
 362877 400112 S0209 S0210 dnaQ aspV FALSE 0.217 133.000 0.000 NA   NA
 362878 362879 S0211 S0212 safA   TRUE 0.796 11.000 0.000 NA   NA
 362879 362880 S0212 S0213   safB FALSE 0.209 144.000 0.000 NA   NA
 362880 362881 S0213 S0214 safB safC TRUE 0.899 -3.000 0.000 NA   NA
 362881 362882 S0214 S0215 safC   TRUE 0.977 16.000 1.000 NA   NA
 362882 362883 S0215 S0217   sat1 FALSE 0.223 195.000 0.154 NA   NA
 362883 362884 S0217 S0218 sat1 sat2 TRUE 0.969 -13.000 0.154 NA   NA
 362884 362885 S0218 S0219 sat2   FALSE 0.056 238.000 0.000 NA   NA
 362886 362887 S0220 S0221     TRUE 0.991 -42.000 0.000 1.000 Y NA
 362887 362888 S0221 S0223     FALSE 0.080 422.000 0.000 1.000 Y NA
 362888 362889 S0223 S0224     TRUE 0.877 27.000 0.000 1.000 Y NA
 362891 362892 S0229 S0230     FALSE 0.024 321.000 0.000 NA   NA
 362892 362893 S0230 S0231     TRUE 0.856 5.000 0.000 NA   NA
 362895 362897 S0233 S0234     TRUE 0.899 -3.000 0.000 NA   NA
 362897 362896 S0234 S0235     TRUE 0.997 -839.000 0.000 0.044 Y NA
 362898 362899 S0236 S0237     TRUE 0.932 -31.000 0.000 NA   NA
 362899 362900 S0237 S0238     TRUE 0.879 1.000 0.000 NA   NA
 362900 362901 S0238 S0239     TRUE 0.921 14.000 0.286 NA   NA
 362901 362902 S0239 S0240     TRUE 0.953 0.000 0.161 NA   NA
 362902 362903 S0240 S0241     FALSE 0.320 45.000 0.000 NA   NA
 362903 362904 S0241 S0242     TRUE 0.930 -22.000 0.000 NA   NA
 362904 362905 S0242 S0243     TRUE 0.988 0.000 0.500 NA   NA
 362905 362906 S0243 S0244     TRUE 0.976 0.000 0.286 NA   NA
 362906 362907 S0244 S0245     TRUE 0.993 0.000 0.750 NA   NA
 362907 362908 S0245 S0246     TRUE 0.989 3.000 0.600 NA   NA
 362908 362909 S0246 S0247     TRUE 0.969 10.000 0.333 NA   NA
 362909 362910 S0247 S0248     TRUE 0.951 1.000 0.167 NA   NA
 362910 362911 S0248 S0249     FALSE 0.215 126.000 0.000 NA   NA
 362911 362912 S0249 S0250     FALSE 0.069 235.000 0.000 1.000   NA
 362913 362914 S0251 S0252 psiF phoA FALSE 0.172 101.000 0.032 NA   NA
 362914 362915 S0252 S0253 phoA yaiB FALSE 0.372 32.000 0.032 NA   NA
 362919 362920 S0257 S0258 yaiW sbmA TRUE 0.749 13.000 0.000 1.000   NA
 2179039 2179040 S0260 S0261 yaiV yaiU FALSE 0.333 43.000 0.000 NA   NA
 2179040 362922 S0261 S0262 yaiU   TRUE 0.571 20.000 0.000 NA   NA
 362922 362923 S0262 S0263     FALSE 0.389 274.000 0.000 0.043 Y NA
 362923 362924 S0263 S0264   is600a TRUE 0.806 141.000 0.182 1.000 Y NA
 362924 2179041 S0264 S0268 is600a yaiT FALSE 0.061 233.000 0.000 NA   NA
 2179041 362925 S0268 S0266 yaiT yi22_6 TRUE 0.953 -1449.000 0.000 NA   NA
 362925 362926 S0266 S0267 yi22_6 yi21_6 TRUE 0.991 -42.000 0.000 1.000 Y NA
 362927 362928 S0269 S0270   hemB FALSE 0.218 137.000 0.000 NA   NA
 362929 362930 S0271 S0272 tauD tauC TRUE 0.968 -3.000 0.214 1.000 N NA
 362930 362931 S0272 S0273 tauC tauB TRUE 0.998 -3.000 0.728 1.000 Y NA
 362931 362932 S0273 S0274 tauB tauA TRUE 0.951 13.000 0.047 1.000 Y NA
 362932 362933 S0274 S0275 tauA   FALSE 0.005 558.000 0.000 1.000 N NA
 362933 362934 S0275 S0276     TRUE 0.992 -81.000 0.000 NA Y NA
 362935 362936 S0277 S0278 ykgH   FALSE 0.202 76.000 0.000 NA   NA
 362937 362938 S0279 S0280 ykgG ykgF TRUE 0.995 -7.000 0.286 0.001   NA
 362938 362939 S0280 S0281 ykgF ykgE TRUE 0.988 11.000 0.286 NA Y NA
 362940 362941 S0282 S0283     TRUE 0.992 -81.000 0.000 NA Y NA
 362941 362942 S0283 S0284   rhsG FALSE 0.004 1078.000 0.000 NA   NA
 362942 362943 S0284 S0285 rhsG   TRUE 0.642 23.000 0.095 NA   NA
 362943 362944 S0285 S0286     FALSE 0.248 57.000 0.000 NA   NA
 362944 362945 S0286 S0287     TRUE 0.655 22.000 0.095 NA   NA
 362945 362946 S0287 S0288   rhsD TRUE 0.899 -3.000 0.000 NA   NA
 362946 362947 S0288 S0289 rhsD rhs-like TRUE 0.899 -3.000 0.000 NA   NA
 362951 362952 S0293 S0294 gmhA yafJ FALSE 0.307 206.000 0.229 1.000   NA
 362954 362955 S0296 S0297 yafL yafM FALSE 0.096 176.000 0.000 NA N NA
 362957 362958 S0298 S0300 mbhA dinP FALSE 0.171 71.000 0.000 1.000 N NA
 362958 362959 S0300 S0301 dinP yafN FALSE 0.202 52.000 0.000 NA N NA
 362959 362960 S0301 S0302 yafN yafO TRUE 0.986 3.000 0.500 NA   NA
 362960 362961 S0302 S0303 yafO yafP TRUE 0.827 10.000 0.000 NA   NA
 362961 362962 S0303 S0304 yafP   FALSE 0.051 246.000 0.000 NA   NA
 362962 362963 S0304 S0305   prfH TRUE 0.612 116.000 0.303 NA   NA
 362965 362966 S0307 S0308 gpt yafA FALSE 0.181 92.000 0.040 NA   NA
 362966 362967 S0308 S0309 yafA crl FALSE 0.241 58.000 0.048 NA   NA
 362969 362970 S0311 S0312     TRUE 0.992 -81.000 0.000 NA Y NA
 362970 362971 S0312 S0313   proB FALSE 0.092 191.000 0.000 1.000 N NA
 362971 362972 S0313 S0314 proB proA TRUE 0.983 12.000 0.026 0.001 Y NA
 362972 400113 S0314 S0315 proA thrW FALSE 0.217 115.000 0.000 NA   NA
 362974 362975 S0317 S0318     TRUE 0.806 141.000 0.182 1.000 Y NA
 362975 362976 S0318 S0319     FALSE 0.270 53.000 0.000 NA   NA
 362976 362977 S0319 S4801     TRUE 0.951 -91.000 0.000 NA   NA
 362980 362981 S4803 S0320 gtrII gtrBI TRUE 0.899 -3.000 0.000 NA   NA
 362981 362982 S0320 S0321 gtrBI gtrAI TRUE 0.899 -3.000 0.000 NA   NA
 362982 362983 S0321 S0322 gtrAI   FALSE 0.050 262.000 0.000 1.000   NA
 362983 362984 S0322 S0323     TRUE 0.501 109.000 0.000 0.043   NA
 362984 362985 S0323 S0324     TRUE 0.806 141.000 0.182 1.000 Y NA
 362986 362987 S0325 S4804     FALSE 0.016 349.000 0.000 1.000 N NA
 362988 362989 S0326 S0327     FALSE 0.016 741.000 0.000 0.043   NA
 362989 362990 S0327 S0328     FALSE 0.021 362.000 0.000 1.000   NA
 362993 362994 S0331 S0332 yaiI aroL FALSE 0.076 183.000 0.007 NA   NA
 362994 362995 S0332 S0333 aroL yaiA FALSE 0.284 50.000 0.044 NA   NA
 362995 362996 S0333 S0334 yaiA aroM FALSE 0.045 258.000 0.000 NA   NA
 362996 362997 S0334 S0335 aroM yaiE FALSE 0.204 72.000 0.049 NA   NA
 362997 362998 S0335 S0336 yaiE   FALSE 0.085 209.000 0.000 NA   NA
 362998 362999 S0336 S0337     TRUE 0.899 -3.000 0.000 NA   NA
 363002 363003 S0341 S0342 araJ sbcC FALSE 0.141 126.000 0.030 1.000 N NA
 363003 363004 S0342 S0343 sbcC sbcD TRUE 0.994 -3.000 0.021 0.001 Y NA
 363005 363006 S0344 S0345 phoB phoR TRUE 0.960 58.000 0.453 0.013 Y NA
 363006 363007 S0345 S0346 phoR brnQ FALSE 0.010 407.000 0.000 1.000 N NA
 363007 363008 S0346 S0347 brnQ proY TRUE 0.925 76.000 0.348 0.085 Y NA
 363008 363009 S0347 S0348 proY malZ FALSE 0.274 156.000 0.123 1.000 N NA
 363010 363011 S0350 S0351 queA tgt TRUE 0.963 55.000 0.360 0.001 Y NA
 363011 363012 S0351 S0352 tgt yajC TRUE 0.855 23.000 0.325 NA N NA
 363012 363013 S0352 S0353 yajC secD TRUE 0.861 28.000 0.045 NA Y NA
 363013 363014 S0353 S0354 secD secF TRUE 0.994 11.000 0.206 0.001 Y NA
 363014 363015 S0354 S0355 secF yajD FALSE 0.177 129.000 0.015 1.000   NA
 363016 363017 S0356 S0357 tsx yajI FALSE 0.030 298.000 0.000 NA   NA
 363018 363019 S0358 S0359 ybaD ribD TRUE 0.963 4.000 0.277 NA N NA
 363019 363020 S0359 S0360 ribD ribH TRUE 0.821 89.000 0.034 0.002 Y NA
 363020 363021 S0360 S0361 ribH nusB TRUE 0.894 20.000 0.347 1.000 N NA
 363021 363022 S0361 S0362 nusB thiL TRUE 0.481 78.000 0.225 1.000 N NA
 363022 363023 S0362 S0363 thiL pgpA TRUE 0.977 -22.000 0.206 1.000 N NA
 2179043 363024 S0364 S0365 yajO dxs FALSE 0.257 55.000 0.000 NA   NA
 363024 363025 S0365 S0366 dxs ispA TRUE 0.894 25.000 0.060 1.000 Y NA
 363025 363026 S0366 S0367 ispA xseB TRUE 0.834 0.000 0.035 1.000 N NA
 363028 363029 S0369 S0370 thiJ apbA TRUE 0.974 -43.000 0.155 NA   NA
 363031 363032 S4809 S4810     TRUE 0.607 53.000 0.000 0.009   NA
 363033 363034 S0372 S4811     TRUE 0.664 128.000 0.000 NA Y NA
 363035 363036 S4812 S0373     FALSE 0.031 294.000 0.000 NA   NA
 363036 363037 S0373 S0374   cyoE FALSE 0.141 184.000 0.000 1.000   NA
 363037 363038 S0374 S0375 cyoE cyoD TRUE 0.883 15.000 0.118 0.085 N NA
 363038 363039 S0375 S0376 cyoD cyoC TRUE 0.998 0.000 0.485 0.053 Y NA
 363039 2179044 S0376 S0377 cyoC cyoB TRUE 0.923 -10.000 0.000 NA   NA
 2179044 2179045 S0377 S0378 cyoB cyoA TRUE 0.542 22.000 0.000 NA   NA
 2179045 363040 S0378 S0379 cyoA   FALSE 0.220 63.000 0.000 NA   NA
 363040 363041 S0379 S0380     FALSE 0.075 216.000 0.000 NA   NA
 363041 363042 S0380 S0381     TRUE 0.899 -3.000 0.000 NA   NA
 363042 363043 S0381 S0382     TRUE 0.571 20.000 0.000 NA   NA
 363043 363044 S0382 S0383     TRUE 0.985 -3.000 0.000 NA Y NA
 363044 363045 S0383 S0384   ampG FALSE 0.008 547.000 0.000 1.000   NA
 363045 363046 S0384 S0385 ampG yajG TRUE 0.694 44.000 0.256 NA   NA
 363047 363048 S0386 S0387 bolA tig FALSE 0.013 344.000 0.000 NA N NA
 363048 363049 S0387 S0388 tig clpP TRUE 0.609 247.000 0.351 1.000 Y NA
 363049 363050 S0388 S0389 clpP clpX TRUE 0.889 126.000 0.352 1.000 Y NA
 363050 363051 S0389 S0390 clpX lon TRUE 0.789 188.000 0.201 0.086 Y NA
 363051 363052 S0390 S0391 lon hupB FALSE 0.057 209.000 0.000 NA N NA
 363052 363053 S0391 S0392 hupB ybaU FALSE 0.075 192.000 0.000 NA N NA
 363053 363054 S0392 S0393 ybaU ybaV FALSE 0.130 151.000 0.033 1.000 N NA
 363054 363055 S0393 S0394 ybaV ybaW FALSE 0.184 94.000 0.027 1.000   NA
 363056 2179046 S0395 S0396 ybaX ybaE FALSE 0.213 65.000 0.000 NA   NA
 363057 363058 S0397 S0398 cof ybaO FALSE 0.180 67.000 0.020 1.000   NA
 363058 363059 S0398 S0399 ybaO mdlA TRUE 0.677 30.000 0.179 1.000 N NA
 363059 363060 S0399 S0400 mdlA mdlB TRUE 1.000 -7.000 0.911 0.005 Y NA
 363060 363061 S0400 S0401 mdlB glnK FALSE 0.079 181.000 0.028 1.000 N NA
 363061 363062 S0401 S0402 glnK amtB TRUE 0.642 30.000 0.156 1.000 N NA
 363064 363065 S0404 S0405 ybaY   FALSE 0.219 111.000 0.000 NA   NA
 2179047 363067 S0407 S0408 ffs ybaA FALSE 0.219 111.000 0.000 NA   NA
 363068 363069 S0409 S0410 ylaB ylaC FALSE 0.166 164.000 0.000 NA   NA
 363069 2179048 S0410 S0411 ylaC ylaD FALSE 0.216 116.000 0.000 NA   NA
 2179048 363070 S0411 S0412 ylaD hha FALSE 0.147 172.000 0.000 NA   NA
 363070 363071 S0412 S0413 hha ybaJ TRUE 0.569 26.000 0.080 NA   NA
 363071 363072 S0413 S0414 ybaJ acrB FALSE 0.007 546.000 0.000 NA   NA
 363072 363073 S0414 S0415 acrB acrA TRUE 0.907 23.000 0.458 1.000 N NA
 363074 363075 S0416 S0417 acrR aefA FALSE 0.182 128.000 0.000 1.000 N NA
 363076 363077 S0418 S0419 ybaM priC TRUE 0.956 14.000 0.474 NA   NA
 363078 363079 S0420 S0421 ybaN apt FALSE 0.176 153.000 0.043 NA   NA
 363079 363080 S0421 S0422 apt dnaX FALSE 0.260 129.000 0.088 1.000 N NA
 363080 363081 S0422 S0423 dnaX ybaB TRUE 0.757 53.000 0.411 NA   NA
 363081 363082 S0423 S0424 ybaB recR TRUE 0.991 0.000 0.604 NA   NA
 363082 363083 S0424 S0425 recR htpG FALSE 0.141 110.000 0.028 1.000 N NA
 363083 363084 S0425 S0426 htpG adk FALSE 0.241 181.000 0.035 0.086 N NA
 363084 363085 S0426 S0427 adk hemH FALSE 0.111 132.000 0.013 1.000 N NA
 363088 363089 S0430 S0431 ybaL fsr FALSE 0.125 238.000 0.000 0.084 N NA
 363091 363092 S0433 S0434 ybaK ybaP FALSE 0.064 204.000 0.022 NA   NA
 363095 363096 S0437 S0438 ybaS ybaT TRUE 0.979 3.000 0.028 1.000 Y NA
 363096 363097 S0438 S0439 ybaT ybbI FALSE 0.181 125.000 0.000 1.000 N NA
 363098 363099 S0440 S0441 ybbJ ybbK TRUE 0.995 0.000 0.313 NA Y NA
 363100 363101 S0442 S0443 ybbL ybbM TRUE 0.967 -40.000 0.127 NA   NA
 363102 363103 S0444 S0445 ybbN ybbO TRUE 0.684 25.000 0.118 1.000   NA
 363103 2179049 S0445 S0446 ybbO tesA TRUE 0.923 -10.000 0.000 NA   NA
 363104 2179050 S0447 S0448 ybbA ybbP TRUE 0.899 -3.000 0.000 NA   NA
 363105 363106 S0449 S0450 ybbB ybbS FALSE 0.135 69.000 0.012 NA   NA
 363107 363108 S0451 S0452 ybbT ybbU TRUE 0.769 78.000 0.625 1.000 N NA
 363108 363109 S0452 S0453 ybbU gcl FALSE 0.239 90.000 0.054 1.000   NA
 363109 363110 S0453 S0454 gcl gip TRUE 0.680 13.000 0.022 1.000   NA
 363111 363112 S0455 S0456     TRUE 0.992 -81.000 0.000 NA Y NA
 363112 363113 S0456 S0457   ylbA TRUE 0.456 29.000 0.000 NA   NA
 363113 363114 S0457 S0458 ylbA ylbB TRUE 0.819 11.000 0.059 NA   NA
 2179051 363115 S0459 S0460 ylbF arcC TRUE 0.899 -3.000 0.000 NA   NA
 363116 363117 S0461 S0462 purK purE TRUE 0.996 -3.000 0.136 0.001 Y NA
 363117 363118 S0462 S0463 purE ybbF FALSE 0.178 118.000 0.016 1.000   NA
 363118 363119 S0463 S0464 ybbF ppiB TRUE 0.970 3.000 0.237 1.000   NA
 363121 363122 S0466 S0467 ybcI ybcJ FALSE 0.142 108.000 0.011 NA   NA
 363122 363123 S0467 S0468 ybcJ folD TRUE 0.901 2.000 0.055 1.000   NA
 363124 363125 S0469 S0470 sfmA sfmC FALSE 0.376 220.000 0.000 1.000 Y NA
 363126 363127 S0471 S0472     TRUE 0.992 -81.000 0.000 NA Y NA
 363127 2179052 S0472 S0473   fimZ FALSE 0.279 52.000 0.000 NA   NA
 363128 363129 S0475 S0476 envY ybcH FALSE 0.126 183.000 0.000 NA   NA
 363129 2179053 S0476 S0477 ybcH nfrA TRUE 0.879 1.000 0.000 NA   NA
 2179053 2179054 S0477 S0478 nfrA nfrB TRUE 0.927 -13.000 0.000 NA   NA
 2179054 363130 S0478 S0479 nfrB ybcZ FALSE 0.195 150.000 0.000 NA   NA
 363130 363131 S0479 S0480 ybcZ ylcA TRUE 0.999 -10.000 0.600 0.001 Y NA
 363132 363133 S0481 S0482 ylcB ylcC TRUE 0.919 24.000 0.500 NA   NA
 363133 2179055 S0482 S0483 ylcC ylcD TRUE 0.642 16.000 0.000 NA   NA
 2179055 363134 S0483 S0484 ylcD   TRUE 0.953 -1248.000 0.000 NA   NA
 363135 363136 S0485 S0486     FALSE 0.254 263.000 0.000 1.000 Y NA
 363136 363137 S0486 S0487     FALSE 0.028 1141.000 0.000 1.000 Y NA
 363137 363138 S0487 S0488     TRUE 0.665 72.000 0.000 1.000 Y NA
 363139 363140 S0490 S0491 ybdE pheP FALSE 0.390 101.000 0.000 0.084 N NA
 363141 363142 S0492 S0493 ybdG nfnB FALSE 0.184 108.000 0.000 1.000 N NA
 363142 363143 S0493 S0494 nfnB ybdF FALSE 0.199 94.000 0.000 NA   NA
 363143 363144 S0494 S0495 ybdF ybdJ FALSE 0.213 65.000 0.000 NA   NA
 363144 363145 S0495 S0496 ybdJ ybdK FALSE 0.211 66.000 0.000 NA   NA
 363146 363147 S0497 S0498 IS103   TRUE 0.899 -3.000 0.000 NA   NA
 363147 363148 S0498 S0499     FALSE 0.007 517.000 0.000 NA   NA
 363148 363149 S0499 S0500     FALSE 0.129 252.000 0.000 0.096   NA
 363150 363151 S0501 S0502 entD fepA TRUE 0.747 166.000 0.700 1.000 N NA
 363152 363153 S0503 S0504 fes entF FALSE 0.077 218.000 0.083 NA N NA
 363153 363154 S0504 S0505 entF   FALSE 0.142 84.000 0.000 NA N NA
 363154 363155 S0505 S0506     TRUE 0.992 -81.000 0.000 NA Y NA
 363155 2179056 S0506 S0507   fepE FALSE 0.082 211.000 0.000 NA   NA
 363156 363157 S0508 S0509 fepC fepG TRUE 0.985 -3.000 0.038 1.000 Y NA
 363157 363158 S0509 S0510 fepG fepD TRUE 0.993 -3.000 0.000 0.054 Y NA
 2179057 363161 S0513 S0514 entC entE TRUE 0.827 10.000 0.000 NA   NA
 363161 363162 S0514 S0515 entE entB TRUE 0.992 14.000 0.667 1.000 Y NA
 363162 363163 S0515 S0516 entB entA TRUE 0.981 0.000 0.024 1.000 Y NA
 363163 363164 S0516 S0517 entA ybdB TRUE 0.981 3.000 0.065 NA Y NA
 363164 363165 S0517 S0518 ybdB cstA FALSE 0.328 181.000 0.222 NA N NA
 2179058 363168 S0524 S0522 ybdM   TRUE 0.953 -1145.000 0.000 NA   NA
 363168 363169 S0522 S0523     FALSE 0.307 240.000 0.000 1.000 Y NA
 363169 2179059 S0523 S0525   ybdN FALSE 0.005 734.000 0.000 NA   NA
 363170 363171 S0526 S0527     TRUE 0.720 57.000 0.000 1.000 Y NA
 363173 363174 S0529 S0530 ahpC ahpF TRUE 0.797 215.000 0.551 1.000 Y NA
 363176 363177 S0532 S0533 ybdR   FALSE 0.202 81.000 0.000 NA   NA
 363178 363179 S0534 S0535 rnk rna FALSE 0.032 229.000 0.018 1.000 N NA
 363179 2179060 S0535 S0536 rna ybdS FALSE 0.202 96.000 0.000 NA   NA
 2179060 363180 S0536 S0537 ybdS citG FALSE 0.287 51.000 0.000 NA   NA
 363180 363181 S0537 S0538 citG ybdU TRUE 0.953 37.000 0.400 1.000 Y NA
 363181 363182 S0538 S0539 ybdU citF TRUE 0.835 4.000 0.000 1.000 N NA
 363182 363183 S0539 S0540 citF citE TRUE 0.944 11.000 0.000 0.001 N NA
 363183 363184 S0540 S0541 citE citD TRUE 0.996 -3.000 0.537 0.001 N NA
 363184 363185 S0541 S0542 citD citC TRUE 0.939 15.000 0.000 1.000 Y NA
 363185 363186 S0542 S0543 citC   FALSE 0.012 380.000 0.000 1.000 N NA
 363186 363187 S0543 S0545     TRUE 0.992 -81.000 0.000 NA Y NA
 363189 363190 S0547 S0548 modC modB TRUE 0.999 3.000 0.537 0.001 Y NA
 363190 363191 S0548 S0549 modB modA TRUE 0.999 0.000 0.627 0.001 Y NA
 363191 363192 S0549 S0550 modA   FALSE 0.197 167.000 0.072 NA   NA
 363193 363194 S0551 S0552 modE modF FALSE 0.374 68.000 0.009 0.085   NA
 363194 363195 S0552 S0553 modF galE FALSE 0.038 261.000 0.023 1.000   NA
 363195 363196 S0553 S0554 galE galT TRUE 0.955 10.000 0.053 0.001 N NA
 363196 363197 S0554 S0555 galT galK TRUE 0.992 4.000 0.370 0.001 N NA
 363197 363198 S0555 S0556 galK galM TRUE 0.996 -6.000 0.083 0.001 Y NA
 363198 363199 S0556 S0557 galM gpmA FALSE 0.390 203.000 0.009 1.000 Y NA
 363201 363202 S0559 S0560   ybgR FALSE 0.271 114.000 0.057 1.000   NA
 363203 363204 S0561 S0562 pnuC nadA TRUE 0.799 38.000 0.023 1.000 Y NA
 363204 400208 S0562 S0563 nadA lysY FALSE 0.050 249.000 0.000 NA   NA
 400208 400207 S0563 S0564 lysY valZ TRUE 0.862 4.000 0.000 NA   NA
 400207 400206 S0564 S0565 valZ lysW FALSE 0.279 52.000 0.000 NA   NA
 400206 400205 S0565 S0566 lysW valT TRUE 0.870 3.000 0.000 NA   NA
 400205 400204 S0566 S0567 valT lysT FALSE 0.218 136.000 0.000 NA   NA
 400204 363205 S0567 S0568 lysT ybgF FALSE 0.163 165.000 0.000 NA   NA
 363205 363206 S0568 S0569 ybgF pal TRUE 0.892 10.000 0.088 1.000   NA
 363206 363207 S0569 S0570 pal tolB TRUE 0.889 35.000 0.592 1.000 N NA
 363207 363208 S0570 S0571 tolB tolA FALSE 0.159 133.000 0.051 NA N NA
 363208 363209 S0571 S0572 tolA tolR FALSE 0.272 65.000 0.114 NA N NA
 363209 363210 S0572 S0573 tolR tolQ TRUE 0.998 4.000 0.556 0.068 Y NA
 363210 363211 S0573 S0574 tolQ ybgC TRUE 0.992 -3.000 0.593 1.000   NA
 363211 363212 S0574 S0575 ybgC ybgE FALSE 0.280 150.000 0.095 NA   NA
 363212 363213 S0575 S0576 ybgE cydB FALSE 0.315 128.000 0.100 NA   NA
 363213 363214 S0576 S0577 cydB cydA TRUE 0.965 16.000 0.000 0.052 Y NA
 363214 363215 S0577 S0578 cydA ybgG FALSE 0.003 845.000 0.000 1.000 N NA
 363215 363216 S0578 S0579 ybgG hrsA TRUE 0.917 18.000 0.036 1.000 Y NA
 363218 363219 S0581 S0582 sucD sucC TRUE 0.999 0.000 0.806 0.001 Y NA
 363219 363220 S0582 S0583 sucC sucB TRUE 0.748 94.000 0.136 1.000 Y NA
 363220 363221 S0583 S0584 sucB sucA TRUE 0.992 15.000 0.667 1.000 Y NA
 363221 363222 S0584 S0585 sucA   TRUE 0.929 -18.000 0.000 NA   NA
 363222 363223 S0585 S0586   sdhB FALSE 0.235 59.000 0.000 NA   NA
 363223 363224 S0586 S0587 sdhB sdhA TRUE 0.995 16.000 0.604 0.003 Y NA
 363224 363225 S0587 S0588 sdhA sdhD TRUE 0.999 0.000 0.705 0.003 Y NA
 363225 363226 S0588 S0589 sdhD sdhC TRUE 0.999 -6.000 0.453 0.001 Y NA
 363227 363228 S0590 S0591 gltA ybgD FALSE 0.011 391.000 0.000 1.000 N NA
 363228 363229 S0591 S0592 ybgD ybgQ TRUE 0.758 51.000 0.000 1.000 Y NA
 363229 363230 S0592 S0593 ybgQ ybgP TRUE 0.939 15.000 0.000 1.000 Y NA
 363230 2179061 S0593 S0594 ybgP ybgO TRUE 0.933 -33.000 0.000 NA   NA
 2179061 363231 S0594 S0595 ybgO abrB FALSE 0.216 107.000 0.000 NA   NA
 363232 363233 S0596 S0597 nei ybgL FALSE 0.395 36.000 0.037 1.000   NA
 363233 2179062 S0597 S0598 ybgL ybgK TRUE 0.923 -10.000 0.000 NA   NA
 2179062 363234 S0598 S0599 ybgK ybgJ TRUE 0.915 -6.000 0.000 NA   NA
 363234 363235 S0599 S0600 ybgJ ybgI TRUE 0.534 23.000 0.050 NA   NA
 363237 363238 S0602 S0603 phrB ybgA TRUE 0.856 -3.000 0.019 NA   NA
 363240 363241 S0605 S0606 rhsE   FALSE 0.006 616.000 0.000 NA   NA
 363241 363242 S0606 S0607     TRUE 0.945 -81.000 0.000 NA   NA
 363242 363243 S0607 S0608   ybfA FALSE 0.008 486.000 0.000 NA   NA
 363244 2179063 S0609 S0610 kdpA kdpB TRUE 0.527 23.000 0.000 NA   NA
 2179063 363245 S0610 S0611 kdpB kdpC TRUE 0.839 9.000 0.000 NA   NA
 363245 2179064 S0611 S0612 kdpC kdpD TRUE 0.919 -7.000 0.000 NA   NA
 2179064 2179065 S0612 S0613 kdpD kdpE TRUE 0.899 -3.000 0.000 NA   NA
 2179065 2179066 S0613 S0614 kdpE speF FALSE 0.005 690.000 0.000 NA   NA
 2179066 363246 S0614 S0615 speF potE TRUE 0.899 -3.000 0.000 NA   NA
 363247 363248 S0616 S0617 pgm seqA TRUE 0.669 26.000 0.151 1.000 N NA
 363249 363250 S0618 S0619 ybfF ybfE TRUE 0.563 71.000 0.276 NA   NA
 363250 363251 S0619 S0620 ybfE fldA TRUE 0.748 140.000 0.473 1.000   NA
 363251 363252 S0620 S0621 fldA fur FALSE 0.072 289.000 0.156 1.000 N NA
 363253 363254 S0622 S0623 ybfN ybfM FALSE 0.380 37.000 0.000 NA   NA
 363254 363255 S0623 S0624 ybfM glnS FALSE 0.007 579.000 0.000 1.000   NA
 363255 363256 S0624 S0625 glnS nagE FALSE 0.039 203.000 0.006 1.000 N NA
 363257 363258 S0626 S0627 nagB nagA TRUE 0.972 60.000 0.557 0.001 Y NA
 363258 363259 S0627 S0628 nagA nagC TRUE 0.996 9.000 0.571 1.000 Y NA
 363259 2179067 S0628 S0629 nagC nagD FALSE 0.302 48.000 0.000 NA   NA
 2179067 363260 S0629 S0630 nagD asnB FALSE 0.013 397.000 0.000 NA   NA
 363260 400115 S0630 S0631 asnB metT FALSE 0.015 379.000 0.000 NA   NA
 400115 400116 S0631 S0632 metT leuW TRUE 0.839 9.000 0.000 NA   NA
 400116 400117 S0632 S0634 leuW glnU TRUE 0.516 24.000 0.000 NA   NA
 400117 400118 S0634 S0636 glnU glnW FALSE 0.396 35.000 0.000 NA   NA
 400118 400119 S0636 S0637 glnW metU TRUE 0.642 16.000 0.000 NA   NA
 400120 400121 S0639 S0640 glnV glnX FALSE 0.370 38.000 0.000 NA   NA
 363262 363263 S0643 S0644 yleA ybeZ TRUE 0.497 114.000 0.220 1.000 N NA
 363263 363264 S0644 S0645 ybeZ ybeY TRUE 0.988 -3.000 0.457 NA   NA
 363264 363265 S0645 S0646 ybeY ybeX FALSE 0.370 90.000 0.150 NA   NA
 363265 363266 S0646 S0647 ybeX lnt TRUE 0.920 25.000 0.557 1.000 N NA
 363266 363267 S0647 S0648 lnt ybeJ FALSE 0.011 396.000 0.000 1.000 N NA
 363267 363268 S0648 S0649 ybeJ gltJ TRUE 0.730 170.000 0.000 0.054 Y NA
 363268 363269 S0649 S0650 gltJ gltK TRUE 0.999 0.000 0.933 0.015 Y NA
 363269 363270 S0650 S0651 gltK gltL TRUE 0.996 0.000 0.379 1.000 Y NA
 363270 363271 S0651 S0652 gltL ybeK TRUE 0.429 118.000 0.195 NA N NA
 363271 2179069 S0652 S0653 ybeK ybeW FALSE 0.202 84.000 0.000 NA   NA
 363272 363273 S0654 S0655 ybeV ybeU TRUE 0.899 -3.000 0.000 NA   NA
 363275 363276 S0657 S0658 ybeS ybeR TRUE 0.899 -3.000 0.000 NA   NA
 363279 363280 S0661 S0662 leuS rlpB TRUE 0.836 15.000 0.182 NA N NA
 363280 363281 S0662 S0663 rlpB holA TRUE 0.956 0.000 0.199 NA N NA
 363281 363282 S0663 S0664 holA ybeN TRUE 0.845 2.000 0.045 1.000 N NA
 363282 363283 S0664 S0665 ybeN phpB TRUE 0.497 24.000 0.057 1.000 N NA
 363283 363284 S0665 S0666 phpB ybeB FALSE 0.017 368.000 0.000 NA   NA
 363284 363285 S0666 S0667 ybeB ybeA TRUE 0.973 4.000 0.307 NA   NA
 363285 363286 S0667 S0668 ybeA mrdA FALSE 0.378 31.000 0.031 NA   NA
 363286 363287 S0668 S0669 mrdA mrdB TRUE 0.841 3.000 0.046 1.000 N NA
 363287 363288 S0669 S0670 mrdB rlpA TRUE 0.665 11.000 0.035 NA N NA
 363288 363289 S0670 S0671 rlpA dacA TRUE 0.912 139.000 0.475 NA Y NA
 363289 363290 S0671 S0672 dacA ybeD FALSE 0.284 111.000 0.081 NA   NA
 363290 363291 S0672 S0673 ybeD lipB TRUE 0.508 101.000 0.219 NA   NA
 363291 363292 S0673 S0674 lipB ybeF FALSE 0.009 412.000 0.000 1.000 N NA
 363292 363293 S0674 S0675 ybeF lipA FALSE 0.036 209.000 0.005 1.000 N NA
 363294 363295 S0676 S0677 ybeC ybeM TRUE 0.507 129.000 0.196 1.000   NA
 363295 2179070 S0677 S0678 ybeM ybeH TRUE 0.467 28.000 0.000 NA   NA
 363297 363298 S0680 S0681 cspE crcA TRUE 0.542 175.000 0.333 1.000   NA
 2179071 363300 S0683 S0684 citB   FALSE 0.021 338.000 0.000 NA   NA
 363301 363302 S0685 S0686     TRUE 0.479 62.000 0.000 0.078   NA
 363302 363303 S0686 S0687     TRUE 0.806 141.000 0.182 1.000 Y NA
 363304 363305 S0688 S0689     FALSE 0.344 42.000 0.000 NA   NA
 363305 363306 S0689 S0690     TRUE 0.987 12.000 1.000 NA   NA
 363306 363307 S0690 S0691     TRUE 0.428 32.000 0.000 NA   NA
 363307 363308 S0691 S0692     TRUE 0.862 4.000 0.000 NA   NA
 363308 363309 S0692 S0693     TRUE 0.862 4.000 0.000 NA   NA
 363309 363310 S0693 S0694     FALSE 0.140 176.000 0.000 NA   NA
 363310 363311 S0694 S0695     TRUE 0.886 0.000 0.000 NA   NA
 363311 363312 S0695 S0696     TRUE 0.925 -12.000 0.000 NA   NA
 363312 363313 S0696 S0697     TRUE 0.938 -15.000 0.000 1.000   NA
 363313 363314 S0697 S0698     TRUE 0.991 -42.000 0.000 1.000 Y NA
 363314 363315 S0698 S0699     FALSE 0.229 76.000 0.000 1.000   NA
 363315 363316 S0699 S0700     TRUE 0.989 11.000 1.000 NA   NA
 363316 363317 S0700 S0701     FALSE 0.204 70.000 0.000 NA   NA
 363317 363318 S0701 S0702     TRUE 0.899 -3.000 0.000 NA   NA
 363318 363319 S0702 S0703     FALSE 0.333 43.000 0.000 NA   NA
 363320 363321 S0704 S0705     FALSE 0.005 810.000 0.000 1.000   NA
 363321 363322 S0705 S0706     FALSE 0.333 43.000 0.000 NA   NA
 363322 363323 S0706 S0707     TRUE 0.899 -3.000 0.000 NA   NA
 363323 363324 S0707 S0708     FALSE 0.198 91.000 0.000 NA   NA
 363324 363325 S0708 S0709     TRUE 0.456 29.000 0.000 NA   NA
 363325 400122 S0709 S0710   tRNA-Met FALSE 0.113 190.000 0.000 NA   NA
 400122 400123 S0710 S0711 tRNA-Met tRNA-Arg TRUE 0.876 2.000 0.000 NA   NA
 400123 400124 S0711 S0712 tRNA-Arg tRNA-Thr TRUE 0.870 3.000 0.000 NA   NA
 400124 400125 S0712 S0713 tRNA-Thr tRNA-Gly TRUE 0.862 4.000 0.000 NA   NA
 400125 363326 S0713 S0714 tRNA-Gly ybcR FALSE 0.005 680.000 0.000 NA   NA
 363327 363328 S0715 S0716     TRUE 0.806 141.000 0.182 1.000 Y NA
 363330 363331 S0719 S0720     TRUE 0.899 -3.000 0.000 NA   NA
 363331 363332 S0720 S0721     FALSE 0.333 43.000 0.000 NA   NA
 363333 363334 S0722 S0723     TRUE 0.992 -3.000 0.000 0.084 Y NA
 363334 363335 S0723 S0724     TRUE 0.899 -3.000 0.000 NA   NA
 363335 363336 S0724 S0725     FALSE 0.201 95.000 0.000 NA   NA
 363336 363337 S0725 S0726   ybcQ TRUE 0.919 -7.000 0.000 NA   NA
 363337 400126 S0726 S0727 ybcQ tRNA-Met FALSE 0.095 200.000 0.000 NA   NA
 400126 400127 S0727 S0728 tRNA-Met tRNA-Arg TRUE 0.876 2.000 0.000 NA   NA
 400127 400128 S0728 S0729 tRNA-Arg tRNA-Thr TRUE 0.870 3.000 0.000 NA   NA
 400128 400129 S0729 S0730 tRNA-Thr tRNA-Gly TRUE 0.862 4.000 0.000 NA   NA
 400129 363338 S0730 S0731 tRNA-Gly   FALSE 0.031 293.000 0.000 NA   NA
 363338 363339 S0731 S0732     TRUE 0.862 4.000 0.000 NA   NA
 363339 363340 S0732 S0733     FALSE 0.211 66.000 0.000 NA   NA
 363340 363341 S0733 S0734     TRUE 0.913 -3.000 0.000 1.000   NA
 363341 363342 S0734 S0735     FALSE 0.253 62.000 0.000 1.000   NA
 363342 363343 S0735 S0736     TRUE 0.806 141.000 0.182 1.000 Y NA
 363343 363344 S0736 S0737     FALSE 0.024 323.000 0.000 NA   NA
 363344 363345 S0737 S0738     TRUE 0.879 1.000 0.000 NA   NA
 363345 363346 S0738 S0739     TRUE 0.913 -3.000 0.000 1.000   NA
 363346 363347 S0739 S0740     TRUE 0.990 -85.000 0.000 0.001   NA
 363347 363348 S0740 S0741     TRUE 0.970 -10.000 0.150 1.000   NA
 363348 363349 S0741 S0742     TRUE 0.419 37.000 0.000 1.000   NA
 363349 363350 S0742 S0743     FALSE 0.242 58.000 0.000 NA   NA
 363350 363351 S0743 S0744     FALSE 0.279 52.000 0.000 NA   NA
 363351 363352 S0744 S0745     TRUE 0.757 12.000 0.000 NA   NA
 363352 363353 S0745 S0746     TRUE 0.943 -13.000 0.071 NA   NA
 363353 363354 S0746 S0747     TRUE 0.995 -3.000 1.000 NA   NA
 363354 363355 S0747 S0748     TRUE 0.989 11.000 1.000 NA   NA
 363355 363356 S0748 S0749     FALSE 0.235 59.000 0.000 NA   NA
 363356 363357 S0749 S0750     FALSE 0.220 63.000 0.000 NA   NA
 363357 363358 S0750 S0751     TRUE 0.991 -28.000 0.400 NA   NA
 363358 363359 S0751 S0752     TRUE 0.984 0.000 0.400 NA   NA
 363359 363360 S0752 S0753     TRUE 0.886 0.000 0.000 NA   NA
 363360 363361 S0753 S0754     FALSE 0.199 149.000 0.000 NA   NA
 363361 363362 S0754 S0755     TRUE 0.899 -3.000 0.000 NA   NA
 363362 363363 S0755 S0756     TRUE 0.756 61.000 0.500 NA   NA
 363363 363364 S0756 S0757     FALSE 0.207 68.000 0.000 NA   NA
 363364 363365 S0757 S0758     FALSE 0.245 64.000 0.000 1.000   NA
 363365 363366 S0758 S0759     FALSE 0.030 301.000 0.000 NA   NA
 363368 363369 S0764 S0765 ybhB bioA FALSE 0.143 59.000 0.003 NA   NA
 363370 363371 S0766 S0767 bioB bioF TRUE 0.997 -3.000 0.168 0.002 Y NA
 363371 363372 S0767 S0768 bioF bioC TRUE 0.997 -13.000 0.133 0.002 Y NA
 363372 363373 S0768 S0769 bioC bioD TRUE 0.996 -7.000 0.054 0.002 Y NA
 363373 363374 S0769 S0770 bioD uvrB FALSE 0.015 579.000 0.000 0.083 N NA
 363376 363377 S0772 S0773 moaA moaB TRUE 0.967 22.000 0.108 0.003 Y NA
 363377 363378 S0773 S0774 moaB moaC TRUE 0.994 3.000 0.109 0.003 Y NA
 363378 363379 S0774 S0775 moaC moaD TRUE 0.997 -7.000 0.175 0.003 Y NA
 363379 363380 S0775 S0776 moaD moaE TRUE 0.999 2.000 0.501 0.003 Y NA
 363380 363381 S0776 S0777 moaE ybhL FALSE 0.167 137.000 0.025 NA   NA
 363381 363382 S0777 S0778 ybhL ybhM FALSE 0.078 205.000 0.037 NA   NA
 363383 363384 S0779 S0780 ybhN ybhO TRUE 0.910 0.000 0.071 NA   NA
 363384 363385 S0780 S0781 ybhO ybhP TRUE 0.983 -3.000 0.333 NA   NA
 363387 363388 S0783 S0784 ybhR ybhS TRUE 0.998 11.000 0.609 0.005 Y NA
 363388 363389 S0784 S0785 ybhS ybhF TRUE 0.996 -7.000 0.547 0.083   NA
 363389 363390 S0785 S0786 ybhF   TRUE 0.994 -22.000 0.545 1.000   NA
 363390 363391 S0786 S0787   ybiH TRUE 0.968 0.000 0.236 1.000 N NA
 363394 363395 S0790 S0791 dinG ybiB FALSE 0.388 28.000 0.041 1.000 N NA
 363395 363396 S0791 S0792 ybiB ybiC TRUE 0.439 141.000 0.000 0.047 N NA
 363397 363398 S0793 S0794 ybiJ ybiI FALSE 0.031 265.000 0.027 NA   NA
 363398 363399 S0794 S0795 ybiI ybiX FALSE 0.230 74.000 0.000 1.000   NA
 363399 2179073 S0795 S0798 ybiX   FALSE 0.344 42.000 0.000 NA   NA
 2179074 363403 S0801 S0802 ybiO glnQ FALSE 0.016 371.000 0.000 NA   NA
 363403 363404 S0802 S0803 glnQ glnP TRUE 0.985 -3.000 0.038 1.000 Y NA
 363404 363405 S0803 S0804 glnP glnH TRUE 0.808 139.000 0.051 0.066 Y NA
 363405 363406 S0804 S0805 glnH dps FALSE 0.010 404.000 0.000 1.000 N NA
 363406 363407 S0805 S0806 dps ybiF FALSE 0.034 299.000 0.044 1.000   NA
 2179075 363410 S0809 S0810     FALSE 0.051 246.000 0.000 NA   NA
 363410 363411 S0810 S0811   ybiR TRUE 0.804 -3.000 0.014 1.000 N NA
 363414 363415 S0814 S0815 ybiU   FALSE 0.189 152.000 0.000 NA   NA
 363415 363416 S0815 S0816   ybiW FALSE 0.234 146.000 0.000 1.000   NA
 363416 363417 S0816 S0817 ybiW ybiY TRUE 0.988 6.000 0.316 0.003 N NA
 363419 363420 S0819 S0820 moeB moeA TRUE 0.998 0.000 0.323 0.003 Y NA
 363421 363422 S0821 S0822 ybiK   TRUE 0.723 20.000 0.104 1.000   NA
 363422 363423 S0822 S0823     TRUE 0.688 20.000 0.083 1.000   NA
 363423 363424 S0823 S0824     TRUE 0.995 18.000 0.803 0.052 Y NA
 363424 363425 S0824 S0825     TRUE 0.999 3.000 0.689 0.052 Y NA
 363425 2179076 S0825 S0826     FALSE 0.136 178.000 0.000 NA   NA
 2179076 363426 S0826 S0827     TRUE 0.843 8.000 0.000 NA   NA
 363428 2179077 S0829 S0830   yliI FALSE 0.219 111.000 0.000 NA   NA
 2179078 363430 S0832 S0833 dacC   TRUE 0.953 -1324.000 0.000 NA   NA
 363430 363431 S0833 S0834     TRUE 0.806 141.000 0.182 1.000 Y NA
 363432 363433 S0836 S0837 deoR ybjG TRUE 0.602 58.000 0.235 1.000   NA
 363435 363436 S0839 S0840 ybjH   FALSE 0.201 86.000 0.000 NA   NA
 363436 363437 S0840 S0841     TRUE 0.518 27.000 0.000 1.000   NA
 363442 363443 S0846 S0847 ybjC mdaA TRUE 0.971 -16.000 0.159 NA   NA
 363443 363444 S0847 S0848 mdaA rimK FALSE 0.192 61.000 0.000 1.000 N NA
 363444 363445 S0848 S0849 rimK ybjN FALSE 0.232 88.000 0.065 NA   NA
 363445 363446 S0849 S0850 ybjN potF FALSE 0.019 352.000 0.000 NA   NA
 363446 363447 S0850 S0851 potF potG TRUE 0.939 95.000 0.679 1.000 Y NA
 363447 363448 S0851 S0852 potG potH TRUE 0.997 10.000 0.857 1.000 Y NA
 363448 363449 S0852 S0853 potH potI TRUE 0.999 -3.000 0.528 0.052 Y NA
 363449 363450 S0853 S0854 potI ybjO TRUE 0.591 60.000 0.264 NA   NA
 363450 363451 S0854 S0855 ybjO ybjF TRUE 0.691 41.000 0.226 NA   NA
 363452 363453 S0856 S0857 artJ artM TRUE 0.430 292.000 0.143 0.066 Y NA
 363453 363454 S0857 S0858 artM artQ TRUE 0.999 0.000 0.714 0.015 Y NA
 363454 363455 S0858 S0859 artQ artI TRUE 0.995 7.000 0.260 0.052 Y NA
 363455 363456 S0859 S0860 artI artP TRUE 0.976 18.000 0.323 1.000 Y NA
 363456 363457 S0860 S0861 artP ybjP FALSE 0.100 218.000 0.081 NA   NA
 363457 363458 S0861 S4813 ybjP   TRUE 0.688 14.000 0.000 NA   NA
 363459 363460 S4814 S0862     FALSE 0.084 210.000 0.000 NA   NA
 363460 363461 S0862 S0863     TRUE 0.899 -3.000 0.000 NA   NA
 363462 363463 S0864 S0865   ybjT TRUE 0.823 63.000 0.022 0.003 Y NA
 363463 363464 S0865 S0866 ybjT ybjU TRUE 0.813 11.000 0.074 1.000 N NA
 363464 363465 S0866 S0867 ybjU poxB TRUE 0.821 37.000 0.041 1.000 Y NA
 363465 363466 S0867 S0868 poxB   FALSE 0.133 133.000 0.025 1.000 N NA
 363466 363467 S0868 S0869   ybjW TRUE 0.981 12.000 0.000 0.017 Y NA
 363467 363468 S0869 S0870 ybjW ybjE FALSE 0.238 144.000 0.000 1.000   NA
 363468 363469 S0870 S0871 ybjE   FALSE 0.229 76.000 0.000 1.000   NA
 363469 363470 S0871 S0872     TRUE 0.991 -42.000 0.000 1.000 Y NA
 363470 363471 S0872 S0873   aqpZ FALSE 0.008 441.000 0.000 1.000 N NA
 363471 363472 S0873 S0874 aqpZ   FALSE 0.238 52.000 0.000 1.000 N NA
 363472 363473 S0874 S0875     TRUE 0.992 -81.000 0.000 NA Y NA
 363476 363477 S0878 S0879   ybjZ TRUE 0.996 -3.000 0.789 0.092 N NA
 363479 363480 S0881 S0882 yljA clpA TRUE 0.912 31.000 0.596 NA   NA
 400203 363481 S0883 S0884 serW infA FALSE 0.047 254.000 0.000 NA   NA
 363481 363482 S0884 S0885 infA aat FALSE 0.018 285.000 0.020 1.000 N NA
 363482 363483 S0885 S0886 aat cydC TRUE 0.805 42.000 0.049 1.000 Y NA
 363483 363484 S0886 S0887 cydC cydD TRUE 0.999 1.000 0.631 0.005 Y NA
 363484 363485 S0887 S0888 cydD trxB TRUE 0.681 123.000 0.049 1.000 Y NA
 363486 363487 S0889 S0890 lrp ftsK TRUE 0.637 135.000 0.345 1.000 N NA
 363487 363488 S0890 S0891 ftsK lolA TRUE 0.550 152.000 0.305 1.000 N NA
 363488 363489 S0891 S0892 lolA ycaJ TRUE 0.904 11.000 0.167 1.000 N NA
 363489 363490 S0892 S0893 ycaJ serS TRUE 0.430 91.000 0.078 0.082 N NA
 363490 363491 S0893 S0894 serS dmsA FALSE 0.019 327.000 0.000 1.000 N NA
 363491 363492 S0894 S0895 dmsA dmsB TRUE 0.991 11.000 0.172 0.051 Y NA
 363492 363493 S0895 S0896 dmsB dmsC TRUE 0.980 2.000 0.333 1.000   NA
 363495 363496 S0898 S0899 ycaD   FALSE 0.022 313.000 0.000 1.000 N NA
 363496 363497 S0899 S0900     TRUE 0.899 -3.000 0.000 NA   NA
 363497 363498 S0900 S0901     TRUE 0.899 -3.000 0.000 NA   NA
 2179079 363499 S0903 S0905     FALSE 0.333 43.000 0.000 NA   NA
 363499 363500 S0905 S0906     TRUE 0.930 -19.000 0.000 NA   NA
 363500 363501 S0906 S0907     TRUE 0.899 -3.000 0.000 NA   NA
 363501 363502 S0907 S0908     TRUE 0.886 0.000 0.000 NA   NA
 363503 363504 S0909 S0910     TRUE 0.806 141.000 0.182 1.000 Y NA
 363505 363506 S0911 S0912     FALSE 0.006 576.000 0.000 NA   NA
 363506 363507 S0912 S0913     FALSE 0.035 284.000 0.000 NA   NA
 363507 363508 S0913 S0914     FALSE 0.005 682.000 0.000 NA   NA
 363508 2179080 S0914 S0916     TRUE 0.665 15.000 0.000 NA   NA
 2179080 363509 S0916 S0917     FALSE 0.206 146.000 0.000 NA   NA
 363509 363510 S0917 S0918     FALSE 0.202 78.000 0.000 NA   NA
 363510 363511 S0918 S0919     TRUE 0.928 -16.000 0.000 NA   NA
 363512 363513 S0920 S0921     TRUE 0.994 2.000 1.000 NA   NA
 363514 363515 S0922 S0923     TRUE 0.991 -42.000 0.000 1.000 Y NA
 363516 363517 S0924 S0925     TRUE 0.934 -39.000 0.000 NA   NA
 363517 363518 S0925 S0927     FALSE 0.008 514.000 0.000 NA   NA
 363518 363519 S0927 S0928     TRUE 0.806 141.000 0.182 1.000 Y NA
 363520 363521 S0929 S0930     FALSE 0.020 344.000 0.000 NA   NA
 363521 363522 S0930 S0931     FALSE 0.037 415.000 0.182 1.000   NA
 363526 363527 S0937 S0938 ybhH ybhI FALSE 0.218 139.000 0.000 NA   NA
 363527 363528 S0938 S0939 ybhI ybhJ TRUE 0.426 183.000 0.300 1.000 N NA
 363529 363530 S0940 S0941 ybhC   TRUE 0.465 135.000 0.200 1.000 N NA
 363530 363531 S0941 S0942     TRUE 0.582 212.000 0.000 0.040 Y NA
 363531 363532 S0942 S0943     TRUE 0.806 141.000 0.182 1.000 Y NA
 363533 363534 S0944 S0945     FALSE 0.243 125.000 0.000 1.000   NA
 363534 363535 S0945 S0946     TRUE 0.899 -3.000 0.000 NA   NA
 363535 363536 S0946 S0947     TRUE 0.899 -3.000 0.000 NA   NA
 363536 363537 S0947 S0948     TRUE 0.851 6.000 0.000 NA   NA
 363537 363538 S0948 S0949     TRUE 0.984 0.000 0.000 1.000 Y NA
 363538 363539 S0949 S0950     TRUE 0.928 -16.000 0.000 NA   NA
 363540 363541 S0952 S0953     TRUE 0.992 -81.000 0.000 NA Y NA
 363541 2179083 S0953 S0954   ycaN TRUE 0.927 -13.000 0.000 NA   NA
 363542 363543 S0956 S0957     TRUE 0.806 141.000 0.182 1.000 Y NA
 363544 363545 S0958 S0959     TRUE 0.684 115.000 0.000 1.000 Y NA
 363545 363546 S0959 S0960     TRUE 0.806 141.000 0.182 1.000 Y NA
 363546 363547 S0960 S0961   pflA FALSE 0.010 409.000 0.000 1.000 N NA
 363547 363548 S0961 S0962 pflA pflB FALSE 0.142 192.000 0.092 1.000 N NA
 363548 363549 S0962 S0963 pflB focA TRUE 0.685 55.000 0.345 1.000 N NA
 363549 363550 S0963 S0964 focA ycaO FALSE 0.012 406.000 0.000 NA   NA
 2179085 363551 S0965 S0966 ycaP serC FALSE 0.098 199.000 0.000 NA   NA
 363551 363552 S0966 S0967 serC aroA TRUE 0.644 71.000 0.033 1.000 Y NA
 363552 363553 S0967 S0968 aroA yi41 FALSE 0.177 144.000 0.000 1.000 N NA
 363553 363554 S0968 S0969 yi41 ycaL FALSE 0.184 136.000 0.000 1.000 N NA
 363554 363555 S0969 S0970 ycaL cmk FALSE 0.062 173.000 0.004 1.000 N NA
 363555 363556 S0970 S0971 cmk rpsA TRUE 0.567 111.000 0.281 1.000 N NA
 363556 363557 S0971 S0972 rpsA himD TRUE 0.506 160.000 0.292 1.000 N NA
 363557 2179086 S0972 S0973 himD ycaI FALSE 0.216 129.000 0.000 NA   NA
 2179086 363558 S0973 S0974 ycaI msbA FALSE 0.380 37.000 0.000 NA   NA
 363558 363559 S0974 S0975 msbA ycaH TRUE 0.966 -3.000 0.205 1.000 N NA
 363559 363560 S0975 S0976 ycaH ycaQ FALSE 0.283 37.000 0.017 NA   NA
 363560 363561 S0976 S0977 ycaQ ycaR FALSE 0.198 52.000 0.016 NA   NA
 363561 363562 S0977 S0978 ycaR kdsB TRUE 0.978 -3.000 0.265 NA   NA
 363562 363563 S0978 S0979 kdsB   FALSE 0.137 154.000 0.023 NA   NA
 363565 363566 S0981 S0982 smtA mukF TRUE 0.979 -3.000 0.325 NA N NA
 363566 363567 S0982 S0983 mukF mukE TRUE 0.973 8.000 0.036 NA Y NA
 363567 363568 S0983 S0984 mukE mukB TRUE 0.994 0.000 0.000 0.001 Y NA
 363568 363569 S0984 S0985 mukB   FALSE 0.141 163.000 0.000 1.000 N NA
 363569 363570 S0985 S0986   ycbB FALSE 0.100 208.000 0.000 1.000   NA
 363570 363571 S0986 S0987 ycbB ycbK TRUE 0.528 181.000 0.372 NA   NA
 363571 363572 S0987 S0988 ycbK ycbL TRUE 0.583 27.000 0.089 NA   NA
 363573 363574 S0989 S0990 aspC ompF FALSE 0.082 185.000 0.036 1.000 N NA
 363574 363575 S0990 S0991 ompF asnS FALSE 0.005 601.000 0.000 1.000 N NA
 363575 363576 S0991 S0992 asnS pncB FALSE 0.104 169.000 0.034 1.000 N NA
 363578 2179087 S0994 S0998 ycbE ycbM TRUE 0.899 -3.000 0.000 NA   NA
 2179087 363579 S0998 S0996 ycbM   TRUE 0.953 -1499.000 0.000 NA   NA
 363579 363580 S0996 S0997     TRUE 0.991 -42.000 0.000 1.000 Y NA
 363580 363581 S0997 S0999   ycbN FALSE 0.029 283.000 0.000 1.000 N NA
 363581 363582 S0999 S1000 ycbN ycbO TRUE 0.982 -3.000 0.341 1.000 N NA
 363582 363583 S1000 S1001 ycbO ycbP TRUE 0.972 -7.000 0.169 1.000   NA
 363584 2179088 S1002 S1003   ycbQ TRUE 0.605 18.000 0.000 NA   NA
 363585 363586 S1004 S1005     TRUE 0.992 -81.000 0.000 NA Y NA
 363587 363588 S1006 S1007 ycbS   TRUE 0.989 -9.000 0.000 1.000 Y NA
 363588 363589 S1007 S1008     TRUE 0.826 98.000 0.000 0.004 Y NA
 363589 363590 S1008 S1009     TRUE 0.999 -40.000 0.667 0.004 Y NA
 363590 363591 S1009 S1010   ycbF TRUE 0.998 -34.000 0.500 1.000 Y NA
 363591 363592 S1010 S1011 ycbF pyrD FALSE 0.185 112.000 0.000 1.000 N NA
 363592 363593 S1011 S1012 pyrD ycbW FALSE 0.283 138.000 0.081 NA   NA
 363595 363596 S1014 S1015 ycbY uup TRUE 0.810 12.000 0.061 1.000   NA
 363596 363597 S1015 S1016 uup pqiA FALSE 0.231 130.000 0.054 NA   NA
 363597 363598 S1016 S1017 pqiA pqiB TRUE 0.992 5.000 0.819 NA   NA
 363598 363599 S1017 S1018 pqiB ymbA TRUE 0.990 -3.000 0.531 NA   NA
 363599 363600 S1018 S1019 ymbA rmf FALSE 0.046 256.000 0.000 NA   NA
 363601 363602 S1020 S1021 fabA   TRUE 0.558 69.000 0.290 1.000 N NA
 363604 363605 S1023 S1024 ompA sulA FALSE 0.015 356.000 0.000 1.000 N NA
 363606 363607 S1025 S1026     FALSE 0.142 76.000 0.000 NA N NA
 363607 363608 S1026 S1027     TRUE 0.940 -21.000 0.000 1.000   NA
 363609 363610 S1028 S1029   yccF TRUE 0.880 10.000 0.090 NA   NA
 363612 363613 S1031 S1032 mgsA   FALSE 0.218 96.000 0.055 NA   NA
 363615 363616 S1034 S1035 yccV   TRUE 0.899 7.000 0.094 NA   NA
 363618 363619 S1037 S1038 yccK yccA FALSE 0.380 91.000 0.140 1.000   NA
 363619 400202 S1038 S1039 yccA serT FALSE 0.087 207.000 0.000 NA   NA
 363620 363621 S1040 S1041 hyaA hyaB TRUE 0.995 -3.000 0.000 0.001 Y NA
 363621 363622 S1041 S1042 hyaB hyaC TRUE 0.987 19.000 0.355 0.050 Y NA
 363622 363623 S1042 S1043 hyaC hyaD TRUE 0.992 -3.000 0.177 1.000 Y NA
 363623 363624 S1043 S1044 hyaD hyaE TRUE 0.935 -3.000 0.096 NA   NA
 363624 363625 S1044 S1045 hyaE hyaF TRUE 0.994 -3.000 0.769 NA   NA
 363625 363626 S1045 S1046 hyaF appC FALSE 0.275 134.000 0.061 1.000   NA
 363626 363627 S1046 S1047 appC appB TRUE 0.988 12.000 0.158 0.050 Y NA
 363627 363628 S1047 S1048 appB appA FALSE 0.141 184.000 0.000 1.000   NA
 2179089 363629 S1050 S1051 yccC etp FALSE 0.195 150.000 0.000 NA   NA
 363629 363630 S1051 S1052 etp yccZ TRUE 0.995 -12.000 0.750 1.000 N NA
 363630 363631 S1052 S1053 yccZ ymcA FALSE 0.313 46.000 0.000 NA   NA
 363631 363632 S1053 S1054 ymcA ymcB TRUE 0.901 0.000 0.060 NA   NA
 363632 363633 S1054 S1055 ymcB ymcC TRUE 0.992 -3.000 0.600 NA   NA
 363633 363634 S1055 S1056 ymcC ymcD FALSE 0.216 107.000 0.000 NA   NA
 363634 363635 S1056 S1057 ymcD cspH FALSE 0.011 424.000 0.000 NA   NA
 363636 363637 S1058 S1059     TRUE 0.992 -81.000 0.000 NA Y NA
 363637 363638 S1059 S1060   cspG TRUE 0.489 22.000 0.000 1.000 N NA
 363638 363639 S1060 S1061 cspG ymcE FALSE 0.143 174.000 0.000 NA   NA
 363640 2179090 S1062 S1063 yccM torS FALSE 0.203 72.000 0.000 NA   NA
 363643 2179091 S1066 S1067 torC torA TRUE 0.886 0.000 0.000 NA   NA
 2179091 2179092 S1067 S1068 torA torD TRUE 0.899 -3.000 0.000 NA   NA
 363644 363645 S1069 S1070     TRUE 0.992 -81.000 0.000 NA Y NA
 363645 363646 S1070 S1072   yccD FALSE 0.007 566.000 0.000 NA   NA
 363646 363647 S1072 S1073 yccD cbpA TRUE 0.989 0.000 0.512 NA   NA
 363648 363649 S1074 S1075 yccE agp FALSE 0.031 293.000 0.000 NA   NA
 363650 363651 S1076 S1077 yccJ wrbA TRUE 0.872 21.000 0.290 NA   NA
 363653 363654 S1079 S1080 ycdG   TRUE 0.995 -45.000 0.533 1.000   NA
 363654 363655 S1080 S1081     TRUE 0.932 47.000 0.625 0.028   NA
 363655 363656 S1081 S1082     TRUE 0.961 10.000 0.256 1.000   NA
 363656 363657 S1082 S1083     TRUE 0.976 8.000 0.365 NA   NA
 363657 363658 S1083 S1084     TRUE 0.960 12.000 0.442 NA N NA
 363658 363659 S1084 S1085     TRUE 0.994 -42.000 0.621 NA N NA
 363661 363662 S1087 S1088     TRUE 0.660 17.000 0.000 1.000   NA
 363663 363664 S1089 S1090   ycdO TRUE 0.900 58.000 0.356 NA Y NA
 363664 363665 S1090 S1091 ycdO ycdB TRUE 0.994 6.000 0.378 NA Y NA
 363665 2179093 S1091 S1092 ycdB phoH FALSE 0.010 436.000 0.000 NA   NA
 363666 363667 S1093 S1094     TRUE 0.913 -3.000 0.000 1.000   NA
 2179094 363668 S1095 S1096   ycdU FALSE 0.219 109.000 0.000 NA   NA
 363668 2179095 S1096 S1097 ycdU   FALSE 0.214 119.000 0.000 NA   NA
 2179095 2179096 S1097 S1098   ycdV TRUE 0.939 -77.000 0.000 NA   NA
 2179097 363669 S1100 S1101 ycdW ycdX FALSE 0.257 55.000 0.000 NA   NA
 363669 363670 S1101 S1102 ycdX ycdY TRUE 0.908 24.000 0.417 1.000   NA
 363670 363671 S1102 S1103 ycdY ycdZ FALSE 0.371 72.000 0.145 NA   NA
 2179098 363672 S1104 S1105 csgG csgF FALSE 0.045 257.000 0.000 NA   NA
 363672 363673 S1105 S1106 csgF csgE TRUE 0.945 25.000 0.723 NA   NA
 363673 363674 S1106 S1107 csgE csgD TRUE 0.945 5.000 0.176 NA   NA
 363675 2179099 S1108 S1109 csgB csgA FALSE 0.352 41.000 0.000 NA   NA
 2179099 363676 S1109 S1110 csgA   TRUE 0.952 -475.000 0.000 NA   NA
 363676 363677 S1110 S1111     TRUE 0.682 141.000 0.000 1.000 Y NA
 363677 363678 S1111 S1113   csgC FALSE 0.013 405.000 0.000 NA   NA
 363678 363679 S1113 S1114 csgC   TRUE 0.709 121.000 0.429 NA   NA
 363679 363680 S1114 S1115     FALSE 0.158 95.000 0.028 NA   NA
 363680 363681 S1115 S1116   ymdC TRUE 0.937 -58.000 0.046 NA   NA
 363683 363684 S1118 S1119 mdoG mdoH TRUE 0.990 -7.000 0.469 1.000 N NA
 363685 363686 S1120 S4816     TRUE 0.901 0.000 0.000 1.000   NA
 363687 363688 S4815 S4817     TRUE 0.899 -3.000 0.000 NA   NA
 363689 363690 S1123 S1124     FALSE 0.254 263.000 0.000 1.000 Y NA
 363691 363692 S1126 S1127     TRUE 0.503 189.000 0.000 1.000 Y NA
 363694 363695 S1129 S1130     TRUE 0.991 -42.000 0.000 1.000 Y NA
 363695 363696 S1130 S1131     FALSE 0.097 396.000 0.000 1.000 Y NA
 363696 363697 S1131 S1132     FALSE 0.323 236.000 0.000 1.000 Y NA
 363697 363698 S1132 S1133     FALSE 0.214 288.000 0.000 1.000 Y NA
 363698 363699 S1133 S1134     FALSE 0.244 141.000 0.000 1.000   NA
 363699 363700 S1134 S1135     TRUE 0.950 9.000 0.000 0.040   NA
 363701 2179100 S1136 S1137   yceE TRUE 0.419 33.000 0.000 NA   NA
 2179100 363702 S1137 S1138 yceE htrB FALSE 0.147 172.000 0.000 NA   NA
 363704 363705 S1140 S1141 yceI   TRUE 0.991 4.000 0.676 1.000   NA
 363705 363706 S1141 S1142   yceO FALSE 0.044 261.000 0.000 NA   NA
 363706 363707 S1142 S1143 yceO solA TRUE 0.682 48.000 0.269 NA   NA
 363707 363708 S1143 S1144 solA bssS TRUE 0.708 115.000 0.423 NA   NA
 363708 363709 S1144 S1145 bssS dinI FALSE 0.033 290.000 0.000 NA   NA
 363709 363710 S1145 S1146 dinI pyrC FALSE 0.165 74.000 0.031 NA   NA
 363710 363711 S1146 S1147 pyrC yceB FALSE 0.159 106.000 0.022 NA   NA
 363711 363712 S1147 S1148 yceB grxB FALSE 0.276 134.000 0.078 NA   NA
 363712 363713 S1148 S1149 grxB yceL FALSE 0.287 64.000 0.103 1.000 N NA
 363714 363715 S1150 S1151 rimJ yceH TRUE 0.880 11.000 0.116 NA   NA
 363715 363716 S1151 S1152 yceH mviM TRUE 0.923 2.000 0.103 NA   NA
 363716 363717 S1152 S1153 mviM mviN FALSE 0.083 200.000 0.022 1.000   NA
 363718 363719 S1154 S1155 flgN flgM TRUE 0.998 5.000 0.361 0.002 Y NA
 363719 363720 S1155 S1156 flgM flgA TRUE 0.864 76.000 0.330 NA Y NA
 363721 2179101 S1157 S1158 flgB flgC TRUE 0.862 4.000 0.000 NA   NA
 2179101 363722 S1158 S1159 flgC flgD TRUE 0.757 12.000 0.000 NA   NA
 363722 363723 S1159 S1160 flgD flgE TRUE 0.911 25.000 0.116 NA Y NA
 363723 2179102 S1160 S1161 flgE flgF TRUE 0.571 20.000 0.000 NA   NA
 2179102 363724 S1161 S1162 flgF flgG FALSE 0.218 138.000 0.000 NA   NA
 363724 363725 S1162 S1163 flgG flgH TRUE 0.947 53.000 0.268 0.004 Y NA
 363725 363726 S1163 S1164 flgH flgI TRUE 0.985 12.000 0.073 0.005 Y NA
 363726 363727 S1164 S1165 flgI flgJ TRUE 0.992 0.000 0.036 0.005 Y NA
 363727 2179103 S1165 S1166 flgJ flgK FALSE 0.211 66.000 0.000 NA   NA
 2179103 2179104 S1166 S1167 flgK flgL TRUE 0.757 12.000 0.000 NA   NA
 363729 363730 S1169 S1170   yceC FALSE 0.132 118.000 0.005 NA   NA
 363732 363733 S1172 S1173 yceD rpmF TRUE 0.838 52.000 0.599 NA   NA
 363733 363734 S1173 S1174 rpmF plsX TRUE 0.666 81.000 0.418 1.000 N NA
 363734 363735 S1174 S1175 plsX fabH TRUE 0.948 68.000 0.380 0.004 Y NA
 363735 363736 S1175 S1176 fabH fabD TRUE 0.984 16.000 0.182 0.004 Y NA
 363736 363737 S1176 S1177 fabD fabG TRUE 0.995 13.000 0.432 0.004 Y NA
 363737 363738 S1177 S1178 fabG acpP TRUE 0.838 211.000 0.321 0.004 Y NA
 363738 363739 S1178 S1179 acpP fabF TRUE 0.879 87.000 0.346 1.000 Y NA
 363739 363740 S1179 S1180 fabF pabC TRUE 0.445 120.000 0.187 1.000 N NA
 363740 363741 S1180 S1181 pabC yceG TRUE 0.960 3.000 0.204 NA   NA
 363741 363742 S1181 S1182 yceG tmk TRUE 0.978 -10.000 0.209 NA   NA
 363742 363743 S1182 S1183 tmk holB TRUE 0.967 -3.000 0.211 1.000 N NA
 363743 363744 S1183 S1184 holB ycfH TRUE 0.975 11.000 0.110 NA Y NA
 363744 363745 S1184 S1185 ycfH ptsG FALSE 0.008 295.000 0.004 NA N NA
 363746 363747 S1187 S1188 ycfF ycfL TRUE 0.875 3.000 0.051 NA   NA
 363747 363748 S1188 S1189 ycfL ycfM TRUE 0.957 15.000 0.516 NA   NA
 363748 363749 S1189 S1190 ycfM ycfN TRUE 0.987 -19.000 0.310 NA   NA
 363749 363750 S1190 S1191 ycfN ycfO TRUE 0.805 11.000 0.069 1.000 N NA
 363750 363751 S1191 S1192 ycfO ycfP TRUE 0.633 23.000 0.091 NA   NA
 363751 363752 S1192 S1193 ycfP ndh FALSE 0.014 408.000 0.057 NA   NA
 363752 363753 S1193 S1194 ndh ycfJ FALSE 0.096 227.000 0.071 1.000   NA
 363756 363757 S1197 S1198 ycfS mfd FALSE 0.160 143.000 0.006 1.000   NA
 363757 363758 S1198 S1199 mfd ycfT FALSE 0.159 128.000 0.003 1.000   NA
 363759 363760 S1200 S1201 ycfU ycfV TRUE 0.985 -7.000 0.175 0.064 N NA
 363760 363761 S1201 S1202 ycfV ycfW TRUE 0.971 0.000 0.125 0.064 N NA
 363761 363762 S1202 S1203 ycfW ycfX TRUE 0.755 29.000 0.225 1.000 N NA
 363762 363763 S1203 S1204 ycfX cobB TRUE 0.952 16.000 0.119 1.000 Y NA
 363764 363765 S1205 S1206 potD potC TRUE 0.993 -3.000 0.000 0.051 Y NA
 363765 363766 S1206 S1207 potC potB TRUE 0.997 -3.000 0.286 0.051 Y NA
 363766 363767 S1207 S1208 potB potA TRUE 0.999 -16.000 0.789 1.000 Y NA
 363770 363771 S1211 S1212     FALSE 0.003 1274.000 0.000 NA   NA
 363771 363772 S1212 S1214     FALSE 0.005 665.000 0.000 NA   NA
 363772 363773 S1214 S1215     TRUE 0.899 -3.000 0.000 NA   NA
 363773 363774 S1215 S1216     FALSE 0.017 367.000 0.000 NA   NA
 363774 363775 S1216 S1217     TRUE 0.899 -3.000 0.000 NA   NA
 363775 363776 S1217 S1218     TRUE 0.827 10.000 0.000 NA   NA
 363776 363777 S1218 S1219     FALSE 0.211 142.000 0.000 NA   NA
 363777 2179106 S1219 S1221     FALSE 0.030 301.000 0.000 NA   NA
 2179106 363778 S1221 S1222     FALSE 0.358 40.000 0.000 NA   NA
 363778 363779 S1222 S1223     TRUE 0.434 38.000 0.071 NA   NA
 363779 363780 S1223 S1224     FALSE 0.320 45.000 0.000 NA   NA
 363780 363781 S1224 S1225     TRUE 0.899 -3.000 0.000 NA   NA
 363781 363782 S1225 S1226     FALSE 0.065 228.000 0.000 NA   NA
 363782 363783 S1226 S1227     FALSE 0.057 237.000 0.000 NA   NA
 363783 363784 S1227 S1228     TRUE 0.635 167.000 0.444 NA   NA
 363784 363785 S1228 S1229     TRUE 0.688 14.000 0.000 NA   NA
 363786 363787 S1231 S1232 phoQ phoP TRUE 0.999 0.000 0.940 1.000 Y NA
 363787 363788 S1232 S1233 phoP purB FALSE 0.073 169.000 0.011 1.000 N NA
 363788 363789 S1233 S1234 purB ycfC TRUE 0.908 4.000 0.093 NA   NA
 363789 363790 S1234 S1235 ycfC trmU TRUE 0.654 36.000 0.180 NA   NA
 363790 363791 S1235 S1236 trmU   TRUE 0.447 54.000 0.158 1.000 N NA
 363791 363792 S1236 S1237   ymfC TRUE 0.931 10.000 0.182 1.000 N NA
 363794 363795 S1239 S1240     TRUE 0.992 -81.000 0.000 NA Y NA
 363796 363797 S1241 S1242     FALSE 0.002 1077.000 0.000 NA N NA
 363798 363799 S1244 S1245     TRUE 0.862 4.000 0.000 NA   NA
 363801 363802 S1247 S1248 minE minD TRUE 0.997 4.000 0.618 NA Y NA
 363802 363803 S1248 S1249 minD minC TRUE 0.976 24.000 0.466 1.000 Y NA
 363805 363806 S1253 S1254     TRUE 0.913 -3.000 0.000 1.000   NA
 363807 363808 S1256 S1257 ycgL   FALSE 0.221 72.000 0.056 NA   NA
 363808 363809 S1257 S1258   ycgN FALSE 0.272 92.000 0.088 NA   NA
 363810 363811 S1260 S1261 umuD umuC TRUE 0.863 0.000 0.000 1.000 N NA
 363812 363813 S1262 S1263 dsbB nhaB TRUE 0.803 146.000 0.723 1.000 N NA
 363816 363817 S1266 S1267 dadA dadX TRUE 0.921 10.000 0.168 1.000 N NA
 363818 363819 S1268 S1269 ipaH_3   FALSE 0.005 727.000 0.000 NA   NA
 363819 363820 S1269 S1271     FALSE 0.243 95.000 0.103 NA N NA
 2179110 363824 S1275 S1276 prrA modD TRUE 0.488 26.000 0.000 NA   NA
 363824 363825 S1276 S1277 modD   TRUE 0.982 0.000 0.034 1.000 Y NA
 363825 363826 S1277 S1278     TRUE 0.982 10.000 0.123 1.000 Y NA
 363826 363827 S1278 S1279     TRUE 0.999 -3.000 0.862 1.000 Y NA
 363827 363828 S1279 S1280     TRUE 0.996 0.000 0.422 1.000 Y NA
 363828 363829 S1280 S1281     FALSE 0.004 713.000 0.000 1.000 N NA
 363829 363830 S1281 S1282     TRUE 0.992 -81.000 0.000 NA Y NA
 363831 363832 S1284 S1285 treA ycgC FALSE 0.029 320.000 0.000 1.000   NA
 363832 363833 S1285 S1286 ycgC   TRUE 0.893 11.000 0.118 1.000   NA
 363833 363834 S1286 S1287     TRUE 0.995 11.000 0.226 0.001 Y NA
 363836 363837 S1289 S1290   ychF FALSE 0.003 844.000 0.000 1.000 N NA
 363837 363838 S1290 S1291 ychF pth TRUE 0.812 117.000 0.184 1.000 Y NA
 363840 363841 S1293 S1294 ychM prsA FALSE 0.117 152.000 0.027 1.000 N NA
 363841 363842 S1294 S1295 prsA ychB FALSE 0.171 151.000 0.053 1.000 N NA
 363842 363843 S1295 S1296 ychB hemM TRUE 0.945 0.000 0.157 1.000 N NA
 363844 363845 S1297 S1298 hemA prfA TRUE 0.759 42.000 0.171 0.043 N NA
 363845 363846 S1298 S1299 prfA hemK TRUE 0.997 0.000 0.229 0.043 Y NA
 363846 363847 S1299 S1300 hemK   TRUE 0.941 -3.000 0.109 NA   NA
 363847 363848 S1300 S1301   ychA TRUE 0.955 4.000 0.195 NA   NA
 363848 363849 S1301 S1302 ychA kdsA TRUE 0.527 36.000 0.089 1.000   NA
 363851 363852 S1304 S1305 chaB chaC FALSE 0.380 137.000 0.140 NA   NA
 363855 363856 S1308 S1309 narL narX TRUE 0.999 -7.000 0.521 0.011 Y NA
 363857 363858 S1310 S1311 narK narG FALSE 0.011 393.000 0.000 1.000 N NA
 363858 363859 S1311 S1312 narG narH TRUE 0.999 -3.000 0.471 0.001 Y NA
 363859 363860 S1312 S1313 narH narJ TRUE 0.999 -3.000 0.588 0.003 Y NA
 363860 363861 S1313 S1314 narJ narI TRUE 0.999 0.000 0.500 0.003 Y NA
 363861 2179112 S1314 S1315 narI   FALSE 0.126 183.000 0.000 NA   NA
 2179113 400200 S1316 S1317 tpr tyrT FALSE 0.057 237.000 0.000 NA   NA
 400200 363862 S1317 S1318 tyrT purU FALSE 0.171 160.000 0.000 NA   NA
 363862 363863 S1318 S1319 purU ychJ TRUE 0.591 50.000 0.200 NA   NA
 363864 363865 S1320 S1321 ychK hnr FALSE 0.225 92.000 0.048 1.000   NA
 363865 363866 S1321 S1322 hnr galU FALSE 0.287 202.000 0.235 1.000 N NA
 363869 363870 S1325 S1326   adhE FALSE 0.181 126.000 0.000 1.000 N NA
 363872 363873 S1328 S1329     TRUE 0.992 -81.000 0.000 NA Y NA
 363874 363875 S1330 S1331 oppA oppB TRUE 0.860 86.000 0.151 0.050 Y NA
 363875 363876 S1331 S1332 oppB oppC TRUE 0.997 15.000 0.870 0.050 Y NA
 363876 363877 S1332 S1333 oppC oppD TRUE 0.993 12.000 0.554 1.000 Y NA
 363877 363878 S1333 S1334 oppD oppF TRUE 0.999 -3.000 0.420 0.002 Y NA
 363879 363880 S1335 S1336   cls TRUE 0.735 35.000 0.231 NA   NA
 363880 363881 S1336 S1337 cls kch FALSE 0.013 371.000 0.000 1.000 N NA
 363882 363883 S1338 S1339     TRUE 0.806 141.000 0.182 1.000 Y NA
 363886 363887 S1342 S1343 yciA yciB FALSE 0.364 105.000 0.167 NA N NA
 363887 363888 S1343 S1344 yciB yciC TRUE 0.487 30.000 0.061 NA   NA
 363890 363891 S1346 S1347 yciE yciF TRUE 0.770 46.000 0.115 0.001   NA
 363891 363892 S1347 S1348 yciF yciG FALSE 0.201 86.000 0.000 NA   NA
 363892 363893 S1348 S1349 yciG trpA FALSE 0.024 323.000 0.000 NA   NA
 363893 363894 S1349 S1350 trpA trpB TRUE 0.999 0.000 0.947 0.001 Y NA
 363894 363895 S1350 S1351 trpB trpC TRUE 0.993 12.000 0.221 0.001 Y NA
 363895 363896 S1351 S1352 trpC trpD TRUE 0.994 1.000 0.293 1.000 Y NA
 363896 363897 S1352 S1353 trpD trpE TRUE 0.993 0.000 0.010 0.001 Y NA
 363897 363898 S1353 S4805 trpE trpL FALSE 0.150 92.000 0.023 NA   NA
 363899 363900 S1354 S1355 yciV yciO TRUE 0.986 -39.000 0.281 NA   NA
 363900 363901 S1355 S1356 yciO yciL TRUE 0.686 101.000 0.075 NA Y NA
 363902 363903 S1357 S1358 btuR yciK TRUE 0.881 -3.000 0.050 1.000 N NA
 363906 363907 S1361 S1362 topA cysB FALSE 0.037 210.000 0.008 1.000 N NA
 363907 363908 S1362 S1363 cysB acnA FALSE 0.003 1002.000 0.000 1.000 N NA
 363910 363911 S1365 S1366 pgpB yciS FALSE 0.361 149.000 0.143 NA   NA
 363911 363912 S1366 S1367 yciS yciM TRUE 0.986 7.000 0.576 NA   NA
 363912 363913 S1367 S1368 yciM pyrF FALSE 0.177 193.000 0.125 1.000 N NA
 363913 363914 S1368 S1369 pyrF yciH TRUE 0.874 -3.000 0.045 1.000 N NA
 363915 363916 S1370 S1371 osmB   FALSE 0.040 269.000 0.000 NA   NA
 363916 2179114 S1371 S1372   yciR FALSE 0.012 411.000 0.000 NA   NA
 2179114 363917 S1372 S1373 yciR rnb FALSE 0.059 235.000 0.000 NA   NA
 363917 363918 S1373 S1374 rnb yciW FALSE 0.313 68.000 0.105 NA   NA
 363918 363919 S1374 S1375 yciW fabI FALSE 0.231 144.000 0.057 NA   NA
 363919 363920 S1375 S1376 fabI ycjD FALSE 0.020 368.000 0.000 1.000   NA
 363920 363921 S1376 S1377 ycjD sapF FALSE 0.235 68.000 0.000 1.000   NA
 363921 363922 S1377 S1378 sapF sapD TRUE 0.999 2.000 0.684 0.015 Y NA
 363922 363923 S1378 S1379 sapD sapC TRUE 0.998 0.000 0.667 1.000 Y NA
 363923 363924 S1379 S1380 sapC sapB TRUE 0.998 -13.000 0.284 0.050 Y NA
 363924 363925 S1380 S1381 sapB sapA TRUE 0.988 -3.000 0.264 0.050 N NA
 363925 2179115 S1381 S1382 sapA ymjA FALSE 0.027 313.000 0.000 NA   NA
 2179115 363926 S1382 S1383 ymjA ycjJ FALSE 0.061 232.000 0.000 NA   NA
 363926 363927 S1383 S1384 ycjJ   FALSE 0.188 303.000 0.000 1.000 Y NA
 363928 363929 S1385 S1386 ycjL ycjC TRUE 0.512 27.000 0.046 1.000   NA
 363929 363930 S1386 S1387 ycjC aldH FALSE 0.147 150.000 0.040 1.000 N NA
 363930 363931 S1387 S1388 aldH ordL TRUE 0.993 2.000 0.500 0.027 N NA
 363931 363932 S1388 S1389 ordL goaG TRUE 0.857 38.000 0.100 1.000 Y NA
 363934 363935 S1391 S1392 pspA pspB TRUE 0.862 54.000 0.739 NA   NA
 363935 363936 S1392 S1393 pspB pspC TRUE 0.994 0.000 0.913 NA   NA
 363936 363937 S1393 S1394 pspC pspD TRUE 0.933 9.000 0.167 NA   NA
 363937 363938 S1394 S1395 pspD pspE TRUE 0.514 43.000 0.133 NA   NA
 363938 2179116 S1395 S1396 pspE ycjM FALSE 0.119 185.000 0.000 NA   NA
 2179116 363939 S1396 S1397 ycjM   FALSE 0.270 53.000 0.000 NA   NA
 363939 363940 S1397 S1398     TRUE 0.992 -81.000 0.000 NA Y NA
 363940 2179117 S1398 S1399     FALSE 0.006 613.000 0.000 NA   NA
 2179117 363941 S1399 S1400   ycjO TRUE 0.557 21.000 0.000 NA   NA
 363941 363942 S1400 S1401 ycjO ycjP TRUE 0.999 -13.000 0.805 0.050 Y NA
 363942 363943 S1401 S1402 ycjP ycjQ TRUE 0.713 31.000 0.205 1.000 N NA
 363943 2179118 S1402 S1403 ycjQ   TRUE 0.605 18.000 0.000 NA   NA
 2179118 363944 S1403 S1404   ycjS TRUE 0.827 10.000 0.000 NA   NA
 363944 363945 S1404 S1405 ycjS ycjT TRUE 0.913 -3.000 0.000 1.000   NA
 363945 363946 S1405 S1406 ycjT ycjU TRUE 0.913 -3.000 0.000 1.000   NA
 363946 363947 S1406 S1407 ycjU ycjV TRUE 0.809 14.000 0.103 1.000   NA
 363947 2179119 S1407 S1408 ycjV ompG FALSE 0.180 156.000 0.000 NA   NA
 363949 363950 S1410 S1411 ycjX ycjF TRUE 0.994 -3.000 0.791 NA   NA
 363950 363951 S1411 S1412 ycjF tyrR FALSE 0.355 148.000 0.137 NA   NA
 363954 363955 S1415 S1416 ycjI   FALSE 0.027 291.000 0.000 1.000 N NA
 363955 2179120 S1416 S1420   ycjY TRUE 0.605 18.000 0.000 NA   NA
 363956 363957 S1418 S1421   ycjZ FALSE 0.004 1544.000 0.000 1.000   NA
 363958 363959 S1422 S1423     TRUE 0.806 141.000 0.182 1.000 Y NA
 363963 363964 S1427 S1428     TRUE 0.962 0.000 0.000 0.072   NA
 363964 363965 S1428 S1429     TRUE 0.901 0.000 0.000 1.000   NA
 363966 2179121 S1431 S1432   ynaJ FALSE 0.011 414.000 0.000 NA   NA
 363967 363968 S1433 S1434 ydaA fnr TRUE 0.927 152.000 0.619 1.000 Y NA
 363968 363969 S1434 S1435 fnr ogt FALSE 0.086 195.000 0.000 1.000 N NA
 363969 2179122 S1435 S1436 ogt ydaH TRUE 0.796 11.000 0.000 NA   NA
 2179122 363970 S1436 S1430 ydaH   FALSE 0.014 390.000 0.000 NA   NA
 363972 363973 S1440 S1441     FALSE 0.218 108.000 0.000 NA   NA
 363974 2179123 S1443 S1444   ydaL FALSE 0.003 1705.000 0.000 NA   NA
 363975 363976 S1446 S1447   dbpA FALSE 0.007 478.000 0.000 1.000 N NA
 363977 363978 S1448 S1449 ydaO ynaF FALSE 0.096 176.000 0.000 NA N NA
 363978 2179125 S1449 S1450 ynaF   FALSE 0.021 341.000 0.000 NA   NA
 2179125 363979 S1450 S1451   ydbK FALSE 0.017 367.000 0.000 NA   NA
 363979 2179126 S1451 S1452 ydbK   FALSE 0.007 537.000 0.000 NA   NA
 2179126 363980 S1452 S1453     TRUE 0.876 2.000 0.000 NA   NA
 363980 363981 S1453 S1454     TRUE 0.992 -81.000 0.000 NA Y NA
 363982 363983 S1456 S1457 ydbL ynbE TRUE 0.990 5.000 0.726 NA   NA
 363983 363984 S1457 S1458 ynbE ydbH TRUE 0.918 -3.000 0.068 NA   NA
 363985 2179128 S1459 S1460 ldhA hslJ FALSE 0.219 111.000 0.000 NA   NA
 363986 363987 S1461 S1462     TRUE 0.992 -81.000 0.000 NA Y NA
 363988 363989 S1463 S1464 ydbD   FALSE 0.149 171.000 0.000 NA   NA
 363989 363990 S1464 S1465     TRUE 0.677 152.000 0.179 0.003   NA
 363990 363991 S1465 S1466     TRUE 0.642 16.000 0.000 NA   NA
 363991 2179129 S1466 S1467   ynbD TRUE 0.688 14.000 0.000 NA   NA
 363992 363993 S1468 S1469     TRUE 0.806 141.000 0.182 1.000 Y NA
 363993 363994 S1469 S1471   acpD FALSE 0.004 763.000 0.000 1.000 N NA
 2179130 363997 S1474 S1475 ydcF aldA FALSE 0.101 197.000 0.000 NA   NA
 363998 363999 S1478 S1479 cybB ydcA FALSE 0.052 245.000 0.000 NA   NA
 364000 364001 S1482 S1483     TRUE 0.998 -3.000 0.571 1.000 Y NA
 364004 364005 S1487 S1488   ydcG FALSE 0.067 225.000 0.000 NA   NA
 364007 364008 S1490 S1491 ydcH rimL FALSE 0.170 63.000 0.026 NA   NA
 364010 364011 S1493 S1494 tehA tehB TRUE 0.966 -3.000 0.175 1.000   NA
 364011 364012 S1494 S1495 tehB   FALSE 0.043 303.000 0.088 NA   NA
 364012 2179135 S1495 S1496     FALSE 0.006 592.000 0.000 NA   NA
 364014 364015 S1498 S1499     FALSE 0.007 568.000 0.000 NA   NA
 364015 364016 S1499 S1500     TRUE 0.992 -81.000 0.000 NA Y NA
 364016 2179136 S1500 S1501   pphA FALSE 0.037 277.000 0.000 NA   NA
 2179136 364017 S1501 S1502 pphA   FALSE 0.223 62.000 0.000 NA   NA
 364017 364018 S1502 S1503     TRUE 0.806 141.000 0.182 1.000 Y NA
 364019 364020 S1504 S1505     TRUE 0.899 21.000 0.353 NA   NA
 364020 2179137 S1505 S1506   yebU FALSE 0.215 118.000 0.000 NA   NA
 2179137 2179138 S1506 S1507 yebU   FALSE 0.202 74.000 0.000 NA   NA
 2179138 364021 S1507 S1508     TRUE 0.932 -31.000 0.000 NA   NA
 364022 364023 S1509 S1510   yebJ FALSE 0.007 676.000 0.081 NA   NA
 364023 364024 S1510 S1511 yebJ prc TRUE 0.885 20.000 0.304 NA   NA
 364024 364025 S1511 S1512 prc htpX FALSE 0.255 195.000 0.042 0.019 N NA
 364027 364028 S1514 S1515     FALSE 0.007 541.000 0.000 NA   NA
 364028 364029 S1515 S1516     TRUE 0.728 75.000 0.500 NA   NA
 364029 364030 S1516 S1517     FALSE 0.005 670.000 0.000 NA   NA
 364030 364031 S1517 S1518   cspC TRUE 0.906 13.000 0.214 NA   NA
 364031 364032 S1518 S1519 cspC yebH FALSE 0.165 166.000 0.038 1.000   NA
 364033 364034 S1520 S1521     FALSE 0.012 409.000 0.000 NA   NA
 364034 364035 S1521 S1522     TRUE 0.992 -81.000 0.000 NA Y NA
 364035 364036 S1522 S1523     TRUE 0.456 29.000 0.000 NA   NA
 364036 364037 S1523 S1524   manZ TRUE 0.861 55.000 0.755 NA   NA
 364037 364038 S1524 S1525 manZ manY TRUE 0.999 4.000 0.939 0.011 Y NA
 364038 364039 S1525 S1526 manY manX TRUE 0.829 63.000 0.000 0.011 Y NA
 364041 364042 S1528 S1529   sdaA TRUE 0.648 131.000 0.389 NA N NA
 364042 364043 S1529 S1530 sdaA yeaB TRUE 0.558 184.000 0.409 1.000   NA
 364043 364044 S1530 S1531 yeaB pabB TRUE 0.929 4.000 0.116 1.000   NA
 364046 364047 S1533 S1534     FALSE 0.018 362.000 0.000 NA   NA
 364048 364049 S1535 S1536   yeaZ FALSE 0.278 58.000 0.082 1.000 N NA
 364049 364050 S1536 S1537 yeaZ   FALSE 0.232 40.000 0.024 1.000 N NA
 364050 364051 S1537 S1538   fadD FALSE 0.406 140.000 0.169 1.000 N NA
 364051 364052 S1538 S1539 fadD rnd FALSE 0.288 82.000 0.115 1.000 N NA
 364053 2179139 S1540 S1541 yeaX yeaW FALSE 0.252 56.000 0.000 NA   NA
 2179139 364054 S1541 S1542 yeaW   FALSE 0.022 330.000 0.000 NA   NA
 364055 364056 S1543 S1544     TRUE 0.806 141.000 0.182 1.000 Y NA
 364059 364060 S1547 S1548 yeaO yeaN FALSE 0.115 153.000 0.007 NA   NA
 364063 2179141 S1552 S1553 yeaK yeaJ FALSE 0.219 109.000 0.000 NA   NA
 364066 364067 S1556 S1557 yeaF   FALSE 0.236 90.000 0.067 NA   NA
 364068 364069 S1558 S1559 yeaD gapA TRUE 0.768 84.000 0.154 1.000 Y NA
 364070 364071 S1560 S1561 yeaA   TRUE 0.667 42.000 0.216 NA   NA
 364071 364072 S1561 S1562     FALSE 0.016 370.000 0.000 NA   NA
 364072 364073 S1562 S1563     TRUE 0.791 27.000 0.250 1.000 N NA
 364073 2179142 S1563 S1564   ydjJ TRUE 0.623 17.000 0.000 NA   NA
 2179142 364074 S1564 S1565 ydjJ   TRUE 0.557 21.000 0.000 NA   NA
 364074 364075 S1565 S1566     TRUE 0.994 5.000 0.368 NA Y NA
 364075 364076 S1566 S1567     TRUE 0.587 55.000 0.269 NA N NA
 364076 364077 S1567 S1568     TRUE 0.556 137.000 0.269 1.000 N NA
 364077 364078 S1568 S1569   ydjE TRUE 0.757 118.000 0.125 1.000 Y NA
 364079 364080 S1570 S1571 ydjB ansA TRUE 0.733 11.000 0.040 1.000 N NA
 364080 364081 S1571 S1572 ansA sppA FALSE 0.228 167.000 0.113 1.000 N NA
 364082 364083 S1573 S1574 ydjA selD FALSE 0.148 117.000 0.033 1.000 N NA
 364083 364084 S1574 S1575 selD topB TRUE 0.811 5.000 0.041 1.000 N NA
 364084 2179143 S1575 S1576 topB   FALSE 0.202 73.000 0.000 NA   NA
 364085 364086 S1578 S1579     TRUE 0.991 -42.000 0.000 1.000 Y NA
 364086 364087 S1579 S1580     FALSE 0.014 395.000 0.000 NA   NA
 2179145 364090 S1583 S1584     FALSE 0.279 52.000 0.000 NA   NA
 364090 2179146 S1584 S1585     TRUE 0.886 0.000 0.000 NA   NA
 2179146 2179147 S1585 S1589     TRUE 0.605 18.000 0.000 NA   NA
 364092 364093 S1590 S1591 ynjA ydjZ TRUE 0.921 0.000 0.087 NA   NA
 364093 364094 S1591 S1592 ydjZ ydjY TRUE 0.813 18.000 0.174 NA   NA
 364094 364095 S1592 S1593 ydjY ydjX TRUE 0.966 -157.000 0.083 NA   NA
 364095 364096 S1593 S1594 ydjX xthA FALSE 0.106 167.000 0.016 NA   NA
 2179148 364097 S1595 S1596 cstC   TRUE 0.886 0.000 0.000 NA   NA
 364097 364098 S1596 S1597     TRUE 0.959 -3.000 0.179 1.000 N NA
 364098 2179149 S1597 S1598     TRUE 0.899 -3.000 0.000 NA   NA
 2179149 364099 S1598 S1599   ydjS TRUE 0.919 -7.000 0.000 NA   NA
 364099 364100 S1599 S1600 ydjS spy FALSE 0.015 330.000 0.000 NA N NA
 364100 364101 S1600 S1601 spy   FALSE 0.071 203.000 0.028 NA   NA
 364102 364103 S1602 S1603   nadE FALSE 0.028 230.000 0.010 1.000 N NA
 364104 364105 S1604 S1605 osmE celA FALSE 0.035 299.000 0.000 1.000   NA
 364105 2179150 S1605 S1606 celA celB FALSE 0.018 363.000 0.000 NA   NA
 2179150 364106 S1606 S1607 celB celC FALSE 0.235 59.000 0.000 NA   NA
 364106 2179151 S1607 S1608 celC celD TRUE 0.796 11.000 0.000 NA   NA
 364107 364108 S1609 S1610     TRUE 0.996 -81.000 0.000 0.100 Y NA
 364109 364110 S1611 S1612 celF ydjC TRUE 0.981 13.000 0.429 0.016   NA
 364112 2179152 S1614 S1615     FALSE 0.037 277.000 0.000 NA   NA
 364113 364114 S1616 S1617     TRUE 0.996 -81.000 0.000 0.100 Y NA
 364114 2179153 S1617 S1618     FALSE 0.204 147.000 0.000 NA   NA
 2179153 364115 S1618 S1619     FALSE 0.217 133.000 0.000 NA   NA
 364115 364116 S1619 S1620   yniC FALSE 0.203 163.000 0.068 NA   NA
 364118 364119 S1622 S1623     FALSE 0.215 106.000 0.000 NA   NA
 364119 364120 S1623 S1624   pfkB FALSE 0.208 101.000 0.000 NA   NA
 2179154 364122 S1626 S1627     TRUE 0.933 -36.000 0.000 NA   NA
 364122 364123 S1627 S1628     TRUE 0.996 -81.000 0.000 0.099 Y NA
 364123 2179155 S1628 S1629     FALSE 0.192 151.000 0.000 NA   NA
 364124 364125 S1630 S1631 thrS infC TRUE 0.816 112.000 0.186 1.000 Y NA
 364125 364126 S1631 S1632 infC rpmI TRUE 0.937 97.000 0.652 1.000 Y NA
 364126 364127 S1632 S1633 rpmI rplT TRUE 0.984 53.000 0.928 0.012 Y NA
 364127 364128 S1633 S4806 rplT pheM FALSE 0.214 123.000 0.000 NA   NA
 364128 364129 S4806 S1634 pheM pheS FALSE 0.036 283.000 0.000 NA   NA
 364129 364130 S1634 S1635 pheS pheT TRUE 0.996 15.000 0.574 0.001 Y NA
 364130 364131 S1635 S1636 pheT himA TRUE 0.951 5.000 0.208 1.000 N NA
 364131 364132 S1636 S1637 himA btuC FALSE 0.124 101.000 0.023 1.000 N NA
 364132 364133 S1637 S1638 btuC btuE FALSE 0.260 63.000 0.084 1.000 N NA
 364133 364134 S1638 S1639 btuE btuD TRUE 0.863 0.000 0.000 1.000 N NA
 364134 364135 S1639 S1640 btuD nlpC FALSE 0.142 78.000 0.000 NA N NA
 364135 364136 S1640 S1641 nlpC   FALSE 0.034 247.000 0.000 NA N NA
 364136 364137 S1641 S1642     FALSE 0.177 64.000 0.031 NA   NA
 364138 364139 S1643 S1644 ydiE aroH FALSE 0.168 132.000 0.054 NA N NA
 364139 364140 S1644 S1645 aroH ydiA FALSE 0.384 157.000 0.165 1.000   NA
 364142 364143 S1647 S1648 ydiD ydiT TRUE 0.887 3.000 0.080 1.000 N NA
 364143 364144 S1648 S1649 ydiT ydiS TRUE 0.998 -3.000 0.400 0.047 Y NA
 364144 364145 S1649 S1650 ydiS ydiR TRUE 0.982 56.000 1.000 0.047 Y NA
 364145 364146 S1650 S1651 ydiR ydiQ TRUE 0.996 20.000 1.000 0.016 Y NA
 364147 364148 S1652 S1653     FALSE 0.012 436.000 0.000 1.000   NA
 364149 364150 S1654 S1655     FALSE 0.207 68.000 0.000 NA   NA
 364150 364151 S1655 S1656     FALSE 0.050 248.000 0.000 NA   NA
 364151 2179156 S1656 S1657     FALSE 0.022 334.000 0.000 NA   NA
 364152 364153 S1658 S1659     TRUE 0.996 -81.000 0.000 0.099 Y NA
 364153 364154 S1659 S1660     TRUE 0.424 208.000 0.000 1.000 Y NA
 364155 364156 S1661 S4818     FALSE 0.028 308.000 0.000 NA   NA
 364156 400199 S4818 S1662   tRNA-Arg FALSE 0.003 1492.000 0.000 NA   NA
 400199 400198 S1662 S1663 tRNA-Arg tRNA-Met FALSE 0.210 102.000 0.000 NA   NA
 400198 2179157 S1663 S1664 tRNA-Met   FALSE 0.208 145.000 0.000 NA   NA
 2179157 364157 S1664 S1665   rus TRUE 0.665 15.000 0.000 NA   NA
 364157 2179158 S1665 S1666 rus   TRUE 0.717 13.000 0.000 NA   NA
 2179158 364158 S1666 S1667   rem FALSE 0.028 308.000 0.000 NA   NA
 364158 364159 S1667 S1668 rem relF FALSE 0.070 221.000 0.000 NA   NA
 364159 364160 S1668 S1669 relF relE FALSE 0.203 72.000 0.000 NA   NA
 364160 364161 S1669 S1670 relE relB TRUE 0.836 0.000 0.000 NA N NA
 364161 364162 S1670 S1671 relB b4285 TRUE 0.683 60.000 0.000 NA Y NA
 364162 364163 S1671 S1673 b4285   FALSE 0.307 240.000 0.000 1.000 Y NA
 364164 364165 S1675 S1676     TRUE 0.806 141.000 0.182 1.000 Y NA
 2179160 364166 S1677 S1678   ydfI FALSE 0.199 89.000 0.000 NA   NA
 364167 364168 S1679 S1680   ydfH FALSE 0.136 178.000 0.000 NA   NA
 364168 364169 S1680 S1681 ydfH ydfG FALSE 0.227 89.000 0.000 1.000   NA
 364172 364173 S1684 S1685 ydeI   FALSE 0.248 57.000 0.000 NA   NA
 364173 364174 S1685 S1686     TRUE 0.806 141.000 0.182 1.000 Y NA
 364177 364178 S1689 S1690 marB marA TRUE 0.428 32.000 0.000 NA   NA
 364178 364179 S1690 S1691 marA marR TRUE 0.993 20.000 0.667 0.039 Y NA
 364181 364182 S1693 S1694 ydeA   FALSE 0.195 150.000 0.000 NA   NA
 2179161 364183 S1695 S1696   yneH FALSE 0.216 64.000 0.000 NA   NA
 364183 364184 S1696 S1697 yneH   TRUE 0.869 0.000 0.037 NA   NA
 364184 364185 S1697 S1698     FALSE 0.009 625.000 0.098 NA   NA
 364185 364186 S1698 S1699   uxaB FALSE 0.054 227.000 0.000 1.000 N NA
 364186 364187 S1699 S1701 uxaB   FALSE 0.007 1843.000 0.143 NA   NA
 364188 364189 S1702 S1703     FALSE 0.396 40.000 0.000 1.000   NA
 364189 364190 S1703 S1704     TRUE 0.557 24.000 0.000 1.000   NA
 364190 364191 S1704 S1705     TRUE 0.672 13.000 0.000 1.000 N NA
 364191 364192 S1705 S1706     TRUE 0.991 -42.000 0.000 1.000 Y NA
 364192 2179162 S1706 S1707   ydeV FALSE 0.138 177.000 0.000 NA   NA
 2179162 364193 S1707 S1708 ydeV ydeW FALSE 0.202 79.000 0.000 NA   NA
 364194 364195 S1709 S1710   ydeY TRUE 0.999 -6.000 0.818 1.000 Y NA
 364195 364196 S1710 S1711 ydeY ydeZ TRUE 0.999 0.000 0.788 0.048 Y NA
 364196 2179163 S1711 S1712 ydeZ   TRUE 0.757 12.000 0.000 NA   NA
 2179163 2179164 S1712 S1713   yneB TRUE 0.477 27.000 0.000 NA   NA
 2179164 364197 S1713 S1714 yneB   FALSE 0.344 42.000 0.000 NA   NA
 364197 364198 S1714 S1715     TRUE 0.991 -42.000 0.000 1.000 Y NA
 364199 364200 S1716 S1717     TRUE 0.720 57.000 0.000 1.000 Y NA
 364200 364201 S1717 S1718   rspA FALSE 0.170 77.000 0.000 1.000 N NA
 364201 364202 S1718 S1719 rspA   FALSE 0.074 206.000 0.020 1.000   NA
 364203 2179165 S1720 S1721   speG FALSE 0.119 185.000 0.000 NA   NA
 364205 2179166 S1723 S1724     FALSE 0.098 199.000 0.000 NA   NA
 364206 364207 S1727 S1728     FALSE 0.200 87.000 0.000 NA   NA
 364207 364208 S1728 S1730     FALSE 0.024 321.000 0.000 NA   NA
 364208 364209 S1730 S1731     TRUE 0.923 -10.000 0.000 NA   NA
 364209 364210 S1731 S1732     FALSE 0.010 431.000 0.000 NA   NA
 364210 364211 S1732 S1736     FALSE 0.004 969.000 0.000 NA   NA
 364211 364212 S1736 S1738     FALSE 0.307 240.000 0.000 1.000 Y NA
 364212 364213 S1738 S1739     FALSE 0.204 70.000 0.000 NA   NA
 2179167 364214 S1741 S1742     FALSE 0.019 355.000 0.000 NA   NA
 364214 364215 S1742 S1743     TRUE 0.980 2.000 0.333 1.000   NA
 364215 364216 S1743 S1744     TRUE 0.529 43.000 0.125 1.000   NA
 364216 364217 S1744 S1745     FALSE 0.156 195.000 0.079 1.000   NA
 364218 364219 S1746 S1747   mlc TRUE 0.704 125.000 0.455 1.000 N NA
 364219 364220 S1747 S1748 mlc ynfL TRUE 0.904 135.000 0.408 1.000 Y NA
 2179168 364221 S1749 S1750 ynfM asr FALSE 0.011 424.000 0.000 NA   NA
 364221 364222 S1750 S1751 asr   FALSE 0.038 276.000 0.000 NA   NA
 364223 364224 S1752 S1753     TRUE 0.999 -13.000 0.869 0.074 Y NA
 364226 364227 S1755 S1756 pntB pntA TRUE 0.998 11.000 0.745 0.001 Y NA
 364228 364229 S1757 S1758     FALSE 0.232 186.000 0.143 NA   NA
 364229 364230 S1758 S1759   ydgB TRUE 0.543 37.000 0.140 1.000 N NA
 364232 364233 S1761 S1762 rstA   FALSE 0.009 498.000 0.000 1.000   NA
 364233 364234 S1762 S1763   rstB FALSE 0.318 179.000 0.000 0.085   NA
 364234 364235 S1763 S1764 rstB tus TRUE 0.492 76.000 0.200 1.000   NA
 364236 364237 S1765 S1766 fumC fumA TRUE 0.849 143.000 0.000 0.001 Y NA
 364238 364239 S1767 S1768 manA ydgA TRUE 0.827 101.000 0.778 NA   NA
 364240 2179169 S1769 S1770 uidC uidB FALSE 0.364 39.000 0.000 NA   NA
 2179169 364241 S1770 S1771 uidB uidA TRUE 0.899 -3.000 0.000 NA   NA
 364241 364242 S1771 S1772 uidA uidR FALSE 0.012 388.000 0.000 1.000 N NA
 364242 2179170 S1772 S1776 uidR hdhA FALSE 0.064 229.000 0.000 NA   NA
 2179170 364243 S1776 S1774 hdhA   TRUE 0.952 -679.000 0.000 NA   NA
 364243 364244 S1774 S1775     TRUE 0.996 -81.000 0.000 0.098 Y NA
 364244 364245 S1775 S1777   malI FALSE 0.004 783.000 0.000 1.000 N NA
 364246 364247 S1778 S1779 malX malY TRUE 0.981 10.000 0.531 1.000 N NA
 364247 364248 S1779 S1780 malY add FALSE 0.330 104.000 0.132 1.000 N NA
 364250 364251 S1782 S1783     FALSE 0.327 86.000 0.120 NA   NA
 364251 364252 S1783 S1784     FALSE 0.374 77.000 0.148 NA   NA
 364252 364253 S1784 S1785     TRUE 0.999 0.000 0.564 0.046 Y NA
 364253 364254 S1785 S1786     TRUE 0.999 -7.000 0.537 0.016 Y NA
 364254 364255 S1786 S1787   ydgO TRUE 0.999 1.000 0.814 0.046 Y NA
 364255 364256 S1787 S1788 ydgO   TRUE 0.999 4.000 0.924 0.046 Y NA
 364256 364257 S1788 S1789   ydgQ TRUE 0.999 4.000 0.908 0.046 Y NA
 364257 364258 S1789 S1790 ydgQ nth TRUE 0.923 0.000 0.109 1.000 N NA
 364258 364259 S1790 S1791 nth ydgR FALSE 0.005 611.000 0.000 1.000 N NA
 364259 364260 S1791 S1792 ydgR gst TRUE 0.631 106.000 0.344 1.000 N NA
 364261 364262 S1793 S1794 pdxY tyrS FALSE 0.183 59.000 0.041 1.000 N NA
 364262 364263 S1794 S1795 tyrS pdxH FALSE 0.196 129.000 0.054 1.000 N NA
 364263 364264 S1795 S1796 pdxH ydhA FALSE 0.231 59.000 0.034 1.000   NA
 364264 364265 S1796 S1797 ydhA   TRUE 0.582 22.000 0.000 1.000   NA
 364265 364266 S1797 S1798     TRUE 0.991 -42.000 0.000 1.000 Y NA
 364266 364267 S1798 S1799     FALSE 0.027 265.000 0.000 NA N NA
 364270 364271 S1802 S1803     TRUE 0.989 -6.000 0.412 NA   NA
 364271 2179171 S1803 S1804     TRUE 0.886 0.000 0.000 NA   NA
 364272 364273 S1805 S1806 sodC   FALSE 0.206 66.000 0.033 1.000   NA
 364273 364274 S1806 S1808     FALSE 0.290 49.000 0.045 NA   NA
 364275 364276 S1807 S1809   nemA TRUE 0.805 37.000 0.362 1.000 N NA
 364276 364277 S1809 S1810 nemA gloA FALSE 0.190 81.000 0.057 1.000 N NA
 364277 364278 S1810 S1811 gloA rnt FALSE 0.333 103.000 0.136 1.000 N NA
 364278 2179172 S1811 S1812 rnt lhr FALSE 0.199 93.000 0.000 NA   NA
 364279 364280 S1813 S1814   ydhD FALSE 0.004 607.000 0.000 NA N NA
 364281 364282 S1815 S1816 ydhO sodB FALSE 0.114 128.000 0.015 1.000 N NA
 364286 364287 S1820 S1821 ydhC cfa FALSE 0.027 291.000 0.000 1.000 N NA
 400130 400131 S1825 S1826 valV valW TRUE 0.856 5.000 0.000 NA   NA
 400131 364291 S1826 S1827 valW   FALSE 0.218 108.000 0.000 NA   NA
 364291 2179173 S1827 S1828     FALSE 0.215 126.000 0.000 NA   NA
 364292 364293 S1829 S1830   ydhU TRUE 0.962 4.000 0.222 NA   NA
 364293 364294 S1830 S1831 ydhU   TRUE 0.998 -3.000 0.444 0.046 Y NA
 364294 364295 S1831 S1832     TRUE 0.916 13.000 0.235 NA   NA
 364295 2179174 S1832 S1833     TRUE 0.717 13.000 0.000 NA   NA
 2179174 364296 S1833 S1834     FALSE 0.031 293.000 0.000 NA   NA
 364296 364297 S1834 S1835     FALSE 0.009 456.000 0.000 NA   NA
 364298 364299 S1836 S1837     TRUE 0.996 -81.000 0.000 0.098 Y NA
 364299 364300 S1837 S1838   pykF FALSE 0.006 549.000 0.000 1.000 N NA
 364300 364301 S1838 S1839 pykF lpp FALSE 0.022 311.000 0.000 1.000 N NA
 364302 364303 S1840 S1841 ynhG ynhA FALSE 0.240 149.000 0.069 NA   NA
 364303 364304 S1841 S1842 ynhA   TRUE 0.890 13.000 0.183 NA   NA
 364304 364305 S1842 S1843   ynhC TRUE 0.964 -3.000 0.193 1.000 N NA
 364305 364306 S1843 S1844 ynhC ynhD TRUE 0.998 -25.000 0.482 1.000 Y NA
 364306 364307 S1844 S1845 ynhD ynhE TRUE 0.995 10.000 0.466 1.000 Y NA
 364307 364308 S1845 S1846 ynhE ydiC TRUE 0.826 9.000 0.041 NA   NA
 364308 364309 S1846 S1847 ydiC   FALSE 0.007 548.000 0.000 NA   NA
 364309 364310 S1847 S1848     TRUE 0.532 19.000 0.032 NA   NA
 364310 364311 S1848 S1849   ydiJ TRUE 0.934 -3.000 0.129 NA N NA
 364312 364313 S1850 S1851     FALSE 0.011 429.000 0.000 NA   NA
 364313 364314 S1851 S1852     FALSE 0.250 160.000 0.095 NA   NA
 364314 364315 S1852 S1853     FALSE 0.100 294.000 0.000 0.048   NA
 364315 364316 S1853 S1854   ydiB TRUE 0.789 12.000 0.082 1.000 N NA
 364316 364317 S1854 S1855 ydiB aroD TRUE 0.893 31.000 0.113 1.000 Y NA
 364318 364319 S1857 S1856     TRUE 0.996 -81.000 0.000 0.098 Y NA
 2179175 364320 S1858 S1859     FALSE 0.279 52.000 0.000 NA   NA
 364320 2179176 S1859 S1860   yddA FALSE 0.033 291.000 0.000 NA   NA
 2179176 364321 S1860 S1861 yddA yddB FALSE 0.005 662.000 0.000 NA   NA
 364322 364323 S1862 S1863     TRUE 0.996 -81.000 0.000 0.097 Y NA
 2179177 364324 S1864 S1865 pqqL   FALSE 0.407 34.000 0.000 NA   NA
 364324 364325 S1865 S1866     TRUE 0.996 -81.000 0.000 0.097 Y NA
 364325 364326 S1866 S1867   gadB FALSE 0.007 478.000 0.000 1.000 N NA
 364326 364327 S1867 S1868 gadB xasA TRUE 0.693 156.000 0.103 1.000 Y NA
 364327 364328 S1868 S1869 xasA   FALSE 0.245 131.000 0.000 1.000   NA
 364328 2179178 S1869 S1870     FALSE 0.013 398.000 0.000 NA   NA
 2179178 2179179 S1870 S1871     TRUE 0.899 -3.000 0.000 NA   NA
 2179179 2179180 S1871 S1872     FALSE 0.045 258.000 0.000 NA   NA
 2179180 364329 S1872 S1873     TRUE 0.796 11.000 0.000 NA   NA
 364329 364330 S1873 S1874     TRUE 0.996 -3.000 0.333 1.000 Y NA
 364330 2179181 S1874 S1875     TRUE 0.919 -7.000 0.000 NA   NA
 364331 364332 S1876 S1877 osmC   FALSE 0.120 173.000 0.000 1.000 N NA
 364332 364333 S1877 S1878     TRUE 0.996 -81.000 0.000 0.097 Y NA
 364334 364335 S1879 S1880 sfcA adhP FALSE 0.246 134.000 0.000 1.000   NA
 364335 364336 S1880 S1881 adhP yddM FALSE 0.235 68.000 0.000 1.000   NA
 364337 364338 S1882 S1883 fdnI fdnH TRUE 0.999 -7.000 0.333 0.002 Y NA
 364338 364339 S1883 S1884 fdnH fdnG TRUE 0.995 13.000 0.429 0.002 Y NA
 364340 364341 S1885 S1887 yddG   FALSE 0.130 255.000 0.000 0.084   NA
 364341 364342 S1887 S1888     FALSE 0.005 759.000 0.000 1.000   NA
 364342 2179182 S1888 S1889     TRUE 0.848 7.000 0.000 NA   NA
 2179182 364343 S1889 S1890     FALSE 0.248 57.000 0.000 NA   NA
 364343 364344 S1890 S1891     TRUE 0.996 -81.000 0.000 0.097 Y NA
 364344 364345 S1891 S1892   narU FALSE 0.007 458.000 0.000 1.000 N NA
 364345 2179183 S1892 S1893 narU narZ FALSE 0.202 82.000 0.000 NA   NA
 2179183 2179184 S1893 S1894 narZ narY TRUE 0.899 -3.000 0.000 NA   NA
 2179184 364346 S1894 S1896 narY   FALSE 0.013 399.000 0.000 NA   NA
 364347 364348 S1897 S1898   yncB FALSE 0.244 141.000 0.000 1.000   NA
 364348 364349 S1898 S1899 yncB   TRUE 0.419 37.000 0.000 1.000   NA
 364349 364350 S1899 S1900     TRUE 0.991 -42.000 0.000 1.000 Y NA
 364351 364352 S1901 S1902     TRUE 0.920 -3.000 0.070 NA   NA
 364353 364354 S1903 S1904     FALSE 0.201 86.000 0.000 NA   NA
 364354 364355 S1904 S1905     FALSE 0.003 1636.000 0.000 NA   NA
 364355 364356 S1905 S1906     TRUE 0.803 22.000 0.216 1.000 N NA
 364356 2179185 S1906 S1907     TRUE 0.923 -10.000 0.000 NA   NA
 364357 364358 S1908 S1909     TRUE 0.962 0.000 0.000 0.069   NA
 364359 364360 S1910 S1911     TRUE 0.554 56.000 0.000 0.037   NA
 364360 364361 S1911 S1912     FALSE 0.049 263.000 0.000 1.000   NA
 364361 364362 S1912 S1915     FALSE 0.003 2737.000 0.000 NA   NA
 364362 2179186 S1915 S1916     TRUE 0.717 13.000 0.000 NA   NA
 2179186 364363 S1916 S1917     TRUE 0.862 4.000 0.000 NA   NA
 364364 364365 S1918 S1919 holE   FALSE 0.090 333.000 0.222 1.000   NA
 364365 364366 S1919 S1920     TRUE 0.924 24.000 0.500 1.000   NA
 364367 364368 S1921 S1922 ptrB yebE FALSE 0.125 210.000 0.092 NA   NA
 364368 364369 S1922 S1923 yebE yebF FALSE 0.017 327.000 0.028 NA   NA
 364369 2179187 S1923 S1924 yebF yebG FALSE 0.209 67.000 0.000 NA   NA
 364371 364372 S1926 S1927 eda edd TRUE 0.965 37.000 0.523 1.000 Y NA
 364372 364373 S1927 S1928 edd zwf FALSE 0.320 235.000 0.041 1.000 Y NA
 364374 364375 S1929 S1930 yebK pykA FALSE 0.145 178.000 0.071 1.000 N NA
 364376 364377 S1931 S1932 msbB yebA TRUE 0.869 120.000 0.299 1.000 Y NA
 364377 364378 S1932 S1933 yebA znuA TRUE 0.766 16.000 0.131 1.000 N NA
 364379 364380 S1934 S1935 yebM yebI TRUE 0.999 -3.000 0.755 0.074 Y NA
 364381 364382 S1936 S1937 ruvB ruvA TRUE 0.998 9.000 0.549 0.001 Y NA
 364383 364384 S1939 S1940 ruvC yebC TRUE 0.769 35.000 0.277 NA   NA
 364384 364385 S1940 S1941 yebC ntpA FALSE 0.409 29.000 0.035 NA   NA
 364385 364386 S1941 S1942 ntpA aspS FALSE 0.173 88.000 0.050 1.000 N NA
 2179189 364387 S1943 S1944 yecD   TRUE 0.953 -1570.000 0.000 NA   NA
 364387 364388 S1944 S1946     FALSE 0.005 729.000 0.000 NA   NA
 364388 364389 S1946 S1947   ipaH_4 FALSE 0.006 600.000 0.000 NA   NA
 364390 364391 S1948 S1949     TRUE 0.886 0.000 0.000 NA   NA
 364392 364393 S1950 S1952     FALSE 0.021 342.000 0.000 NA   NA
 364393 364394 S1952 S1953     TRUE 0.991 -42.000 0.000 1.000 Y NA
 364394 364395 S1953 S1954     FALSE 0.007 543.000 0.000 NA   NA
 364395 364396 S1954 S1955     FALSE 0.206 100.000 0.000 NA   NA
 364396 364397 S1955 S1957     FALSE 0.004 1243.000 0.000 NA   NA
 364397 364398 S1957 S1958     FALSE 0.302 60.000 0.083 NA   NA
 364398 364399 S1958 S1959     FALSE 0.202 75.000 0.000 NA   NA
 364399 364400 S1959 S1960     FALSE 0.323 236.000 0.000 1.000 Y NA
 364401 364402 S1961 S1962     TRUE 0.996 -81.000 0.000 0.097 Y NA
 364403 364404 S1963 S1964   sitA FALSE 0.011 456.000 0.000 1.000   NA
 364404 364405 S1964 S1965 sitA sitB TRUE 0.998 0.000 0.894 1.000 Y NA
 364405 364406 S1965 S1966 sitB sitC TRUE 0.999 -3.000 0.857 0.074 Y NA
 364406 364407 S1966 S1967 sitC sitD TRUE 0.999 -3.000 0.525 0.005 Y NA
 364408 364409 S1968 S1969     TRUE 0.796 11.000 0.000 NA   NA
 364409 364410 S1969 S1970     TRUE 0.516 24.000 0.000 NA   NA
 364410 364411 S1970 S1971     FALSE 0.230 60.000 0.000 NA   NA
 364411 364412 S1971 S1972     FALSE 0.075 217.000 0.000 NA   NA
 364412 364413 S1972 S1973     FALSE 0.100 208.000 0.000 1.000   NA
 364413 364414 S1973 S1975     FALSE 0.197 213.000 0.000 0.097   NA
 364414 364415 S1975 S1978     FALSE 0.046 589.000 0.000 1.000 Y NA
 364415 364416 S1978 S1980     FALSE 0.307 240.000 0.000 1.000 Y NA
 364416 364417 S1980 S1981     FALSE 0.036 701.000 0.000 1.000 Y NA
 364417 400197 S1981 S1982   tRNA-Gly FALSE 0.217 115.000 0.000 NA   NA
 400197 400196 S1982 S1983 tRNA-Gly tRNA-Thr TRUE 0.862 4.000 0.000 NA   NA
 400196 400195 S1983 S1984 tRNA-Thr tRNA-Arg TRUE 0.870 3.000 0.000 NA   NA
 400195 400194 S1984 S1985 tRNA-Arg tRNA-Met TRUE 0.876 2.000 0.000 NA   NA
 400194 364418 S1985 S1986 tRNA-Met   FALSE 0.138 177.000 0.000 NA   NA
 364418 364419 S1986 S1987     TRUE 0.899 -3.000 0.000 NA   NA
 364420 364421 S1989 S1990     FALSE 0.006 498.000 0.000 1.000 N NA
 364421 364422 S1990 S1991     FALSE 0.325 44.000 0.000 NA   NA
 364422 364423 S1991 S1992     TRUE 0.986 -3.000 0.400 NA   NA
 364423 364424 S1992 S1994     FALSE 0.214 124.000 0.000 NA   NA
 364424 364425 S1994 S1995     TRUE 0.862 4.000 0.000 NA   NA
 2179190 364427 S1999 S2000 yecE yecN FALSE 0.270 53.000 0.000 NA   NA
 364427 364428 S2000 S2001 yecN yecO TRUE 0.453 41.000 0.089 NA   NA
 364428 364429 S2001 S2002 yecO yecP TRUE 0.982 -3.000 0.315 NA   NA
 364430 364431 S2003 S2004 bisZ yecK TRUE 0.987 25.000 0.481 0.046 Y NA
 364431 364432 S2004 S2005 yecK cutC FALSE 0.017 388.000 0.000 1.000   NA
 364432 364433 S2005 S2006 cutC yecM FALSE 0.032 320.000 0.057 1.000   NA
 364434 2179191 S2007 S2008 argS yecT FALSE 0.173 159.000 0.000 NA   NA
 364435 364436 S2009 S2011     FALSE 0.012 435.000 0.000 1.000   NA
 364436 364437 S2011 S2012   flhE FALSE 0.313 52.000 0.000 1.000   NA
 364437 2179192 S2012 S2013 flhE flhA TRUE 0.886 0.000 0.000 NA   NA
 2179192 364438 S2013 S2014 flhA flhB FALSE 0.313 46.000 0.000 NA   NA
 364441 364442 S2019 S2020     FALSE 0.008 495.000 0.000 NA   NA
 364443 364444 S2021 S2022 cheZ cheY TRUE 0.968 11.000 0.000 1.000 Y NA
 364444 364445 S2022 S2023 cheY cheB TRUE 0.972 15.000 0.000 0.009 Y NA
 364445 364446 S2023 S2024 cheB cheR TRUE 0.981 3.000 0.000 1.000 Y NA
 364446 364447 S2024 S2025 cheR tap TRUE 0.958 19.000 0.188 1.000 Y NA
 364447 364448 S2025 S2026 tap tar TRUE 0.958 46.000 0.235 0.001 Y NA
 364448 364449 S2026 S2027 tar cheW TRUE 0.828 145.000 0.043 0.003 Y NA
 364449 364450 S2027 S2028 cheW cheA TRUE 0.991 21.000 0.447 0.002 Y NA
 364450 364451 S2028 S2029 cheA motB TRUE 0.998 5.000 0.913 1.000 Y NA
 364451 364452 S2029 S2030 motB motA TRUE 0.997 -3.000 0.429 1.000 Y NA
 364452 364453 S2030 S2031 motA flhC TRUE 0.712 127.000 0.408 1.000   NA
 364453 2179193 S2031 S2032 flhC flhD TRUE 0.870 3.000 0.000 NA   NA
 364454 364455 S2033 S2034     TRUE 0.996 -81.000 0.000 0.096 Y NA
 2179194 364456 S2035 S2036 otsA otsB FALSE 0.217 133.000 0.000 NA   NA
 364456 364457 S2036 S2038 otsB araH TRUE 0.577 167.000 0.037 1.000 Y NA
 364457 364458 S2038 S2039 araH araG TRUE 0.996 12.000 0.451 0.002 Y NA
 364458 2179195 S2039 S2040 araG araF FALSE 0.204 70.000 0.000 NA   NA
 364459 364461 S2041 S2043 yecI   FALSE 0.004 795.000 0.000 NA   NA
 364461 364462 S2043 S2044   ftn FALSE 0.149 171.000 0.000 NA   NA
 364465 400193 S2047 S2048 yecA leuZ FALSE 0.102 196.000 0.000 NA   NA
 400193 400192 S2048 S2049 leuZ cysT TRUE 0.717 13.000 0.000 NA   NA
 400192 400191 S2049 S2050 cysT glyW FALSE 0.257 55.000 0.000 NA   NA
 400191 364466 S2050 S2051 glyW pgsA FALSE 0.189 152.000 0.000 NA   NA
 364466 364467 S2051 S2052 pgsA uvrC TRUE 0.551 57.000 0.227 1.000 N NA
 364467 364468 S2052 S2053 uvrC uvrY TRUE 0.972 -3.000 0.086 0.019 N NA
 364470 364471 S2055 S2056 sdiA yecC FALSE 0.091 230.000 0.071 1.000   NA
 364471 364472 S2056 S2057 yecC yecS TRUE 0.991 -3.000 0.150 1.000 Y NA
 364472 364473 S2057 S2058 yecS yedO TRUE 0.940 15.000 0.050 1.000 Y NA
 364473 2179196 S2058 S2059 yedO fliY FALSE 0.213 105.000 0.000 NA   NA
 2179196 364474 S2059 S2060 fliY fliZ FALSE 0.200 88.000 0.000 NA   NA
 364474 2179197 S2060 S2061 fliZ fliA TRUE 0.827 10.000 0.000 NA   NA
 2179197 364475 S2061 S2062 fliA fliC FALSE 0.163 165.000 0.000 NA   NA
 364476 364477 S2063 S2064 fliD fliS TRUE 0.982 25.000 0.284 0.002 Y NA
 364477 364478 S2064 S2065 fliS fliT TRUE 0.981 0.000 0.324 1.000   NA
 364478 364479 S2065 S2066 fliT amyA FALSE 0.345 78.000 0.115 1.000   NA
 364481 364482 S2068 S2069 yedE yedF TRUE 0.995 -3.000 0.844 NA   NA
 364482 2179198 S2069 S2070 yedF yedK FALSE 0.216 107.000 0.000 NA   NA
 364485 364486 S4819 S4820   ybcL TRUE 0.986 10.000 0.625 NA   NA
 364486 364487 S4820 S4821 ybcL   FALSE 0.152 169.000 0.000 NA   NA
 2179200 364489 S2077 S2078 fliF fliG TRUE 0.919 -7.000 0.000 NA   NA
 364489 364490 S2078 S2079 fliG fliH TRUE 0.995 -7.000 0.000 0.003 Y NA
 364490 364491 S2079 S2080 fliH fliI TRUE 0.993 0.000 0.000 0.003 Y NA
 364491 2179201 S2080 S2081 fliI fliJ TRUE 0.587 19.000 0.000 NA   NA
 2179201 364492 S2081 S2082 fliJ fliK TRUE 0.899 -3.000 0.000 NA   NA
 364492 364493 S2082 S2083 fliK fliL TRUE 0.749 105.000 0.119 1.000 Y NA
 364493 364494 S2083 S2084 fliL fliM TRUE 0.999 5.000 0.957 0.001 Y NA
 364494 364495 S2084 S2085 fliM fliN TRUE 0.996 -3.000 0.137 0.001 Y NA
 364495 364496 S2085 S2086 fliN fliO TRUE 0.996 3.000 0.443 1.000 Y NA
 364496 2179202 S2086 S2087 fliO fliP TRUE 0.886 0.000 0.000 NA   NA
 2179202 364497 S2087 S2088 fliP fliQ TRUE 0.827 10.000 0.000 NA   NA
 364497 364498 S2088 S2089 fliQ fliR TRUE 0.990 9.000 0.000 0.002 Y NA
 364498 364499 S2089 S2090 fliR rcsA FALSE 0.028 285.000 0.000 1.000 N NA
 2179205 364502 S2095 S2096     FALSE 0.180 156.000 0.000 NA   NA
 364502 364503 S2096 S2097   yedI FALSE 0.155 79.000 0.025 NA   NA
 364505 364506 S2099 S2100 vsr dcm TRUE 0.990 -19.000 0.000 1.000 Y NA
 364506 2179206 S2100 S2101 dcm yedJ FALSE 0.218 140.000 0.000 NA   NA
 2179206 2179207 S2101 S2102 yedJ   FALSE 0.358 40.000 0.000 NA   NA
 2179207 364507 S2102 S2103     TRUE 0.642 16.000 0.000 NA   NA
 364507 364508 S2103 S2104     TRUE 0.720 57.000 0.000 1.000 Y NA
 364510 364511 S2106 S2107     TRUE 0.999 -42.000 0.667 1.000 Y NA
 364512 364513 S2108 S2109     FALSE 0.006 628.000 0.000 1.000   NA
 364513 364514 S2109 S2110     TRUE 0.996 -81.000 0.000 0.096 Y NA
 364514 364515 S2110 S2111   yedU FALSE 0.313 46.000 0.000 NA   NA
 364516 364517 S2112 S2113 yedV yedW TRUE 0.999 0.000 0.857 0.001 Y NA
 364518 2179208 S2114 S2115     FALSE 0.219 109.000 0.000 NA   NA
 2179208 364519 S2115 S2116     TRUE 0.879 1.000 0.000 NA   NA
 364519 364520 S2116 S2117     FALSE 0.052 258.000 0.000 1.000   NA
 364524 364525 S2122 S2123     TRUE 0.996 -81.000 0.000 0.095 Y NA
 364526 364527 S2124 S2126     TRUE 0.728 85.000 0.500 NA   NA
 364527 364528 S2126 S2127     TRUE 0.994 0.000 0.900 NA   NA
 364528 364529 S2127 S2128     TRUE 0.995 0.000 1.000 NA   NA
 364529 364530 S2128 S2129     FALSE 0.328 168.000 0.167 NA   NA
 364530 364531 S2129 S2130     FALSE 0.216 130.000 0.000 NA   NA
 364531 364532 S2130 S2131     TRUE 0.806 141.000 0.182 1.000 Y NA
 364532 364533 S2131 S2133     FALSE 0.004 875.000 0.000 NA   NA
 364533 364534 S2133 S2134     TRUE 0.899 -3.000 0.000 NA   NA
 364534 5918365 S2134 S2137a     FALSE 0.004 787.000 0.000 NA   NA
 5918365 400189 S2137a S2137   tRNA-Thr TRUE 0.862 4.000 0.000 NA   NA
 400189 400187 S2137 S2138 tRNA-Thr tRNA-Met FALSE 0.202 81.000 0.000 NA   NA
 400187 364535 S2138 S2139 tRNA-Met   FALSE 0.098 199.000 0.000 NA   NA
 364535 364536 S2139 S2140     TRUE 0.899 -3.000 0.000 NA   NA
 364536 364537 S2140 S2142     TRUE 0.879 1.000 0.000 NA   NA
 364539 364540 S2143 S2144     FALSE 0.006 595.000 0.000 NA   NA
 364541 364542 S2145 S2146     FALSE 0.132 180.000 0.000 NA   NA
 364543 400132 S2148 S2149   tRNA-Asn FALSE 0.208 101.000 0.000 NA   NA
 400132 364544 S2149 S2152 tRNA-Asn   FALSE 0.005 675.000 0.000 NA   NA
 2179209 364546 S2156 S2157     TRUE 0.952 -873.000 0.000 NA   NA
 364546 364547 S2157 S2158     TRUE 0.806 141.000 0.182 1.000 Y NA
 364547 364548 S2158 S2160   amn FALSE 0.015 352.000 0.000 1.000 N NA
 364548 364549 S2160 S2161 amn   FALSE 0.020 343.000 0.000 NA   NA
 400185 2179210 S2162 S2163 asnW yeeO FALSE 0.208 101.000 0.000 NA   NA
 364550 364551 S2165 S2166 cbl nac TRUE 0.905 102.000 0.222 0.043 Y NA
 364552 364553 S2168 S2169 erfK cobT FALSE 0.153 62.000 0.015 NA   NA
 364553 364554 S2169 S2170 cobT cobS TRUE 0.984 12.000 0.056 0.003 Y NA
 364554 2179211 S2170 S2171 cobS cobU TRUE 0.899 -3.000 0.000 NA   NA
 2179211 364555 S2171 S2172 cobU   FALSE 0.320 45.000 0.000 NA   NA
 364555 364556 S2172 S2173     TRUE 0.806 141.000 0.182 1.000 Y NA
 364557 364558 S2175 S2176 is629a is629b FALSE 0.067 236.000 0.000 1.000   NA
 364559 2179212 S2177 S2178 yeeX yeeA FALSE 0.215 106.000 0.000 NA   NA
 364560 364561 S2179 S2180     TRUE 0.899 -3.000 0.000 NA   NA
 364562 364563 S2181 S2182     TRUE 0.757 12.000 0.000 NA   NA
 364564 364565 S2184 S2185     FALSE 0.205 69.000 0.000 NA   NA
 364566 364567 S2187 S2189     FALSE 0.004 777.000 0.000 NA   NA
 364567 364568 S2189 S2190     TRUE 0.899 -3.000 0.000 NA   NA
 364568 364569 S2190 S2191     TRUE 0.899 -3.000 0.000 NA   NA
 364571 364572 S2194 S2195 yeeD yeeE TRUE 0.950 14.000 0.419 NA   NA
 364572 364573 S2195 S2196 yeeE yeeF FALSE 0.134 179.000 0.000 NA   NA
 364573 364574 S2196 S2197 yeeF yeeY FALSE 0.065 213.000 0.000 1.000 N NA
 364574 364575 S2197 S2198 yeeY   FALSE 0.175 46.000 0.015 1.000 N NA
 364575 364576 S2198 S2199     FALSE 0.015 359.000 0.000 1.000 N NA
 364576 364577 S2199 S2200     TRUE 0.788 128.000 0.000 0.095 Y NA
 364577 364578 S2200 S2201   yefM FALSE 0.310 34.000 0.000 NA N NA
 364579 364580 S2202 S2203 hisG hisD TRUE 0.995 6.000 0.171 0.002 Y NA
 364580 364581 S2203 S2204 hisD hisC TRUE 0.998 -3.000 0.294 0.002 Y NA
 364581 364582 S2204 S2205 hisC hisB TRUE 0.998 0.000 0.341 0.002 Y NA
 364582 364583 S2205 S2206 hisB hisH TRUE 0.995 0.000 0.128 0.002 Y NA
 364583 364584 S2206 S2207 hisH hisA TRUE 0.992 0.000 0.010 0.002 Y NA
 364584 364585 S2207 S2208 hisA hisF TRUE 0.995 -18.000 0.003 0.002 Y NA
 364585 364586 S2208 S2209 hisF hisI TRUE 0.999 -6.000 0.430 0.002 Y NA
 364587 2179213 S2210 S2211 wzzB ugd FALSE 0.219 110.000 0.000 NA   NA
 2179213 364588 S2211 S2212 ugd gnd FALSE 0.049 250.000 0.000 NA   NA
 364588 364589 S2212 S2213 gnd   FALSE 0.219 109.000 0.000 NA   NA
 364589 364590 S2213 S2214     TRUE 0.899 -3.000 0.000 NA   NA
 364590 364591 S2214 S2215     FALSE 0.208 101.000 0.000 NA   NA
 364591 364592 S2215 S2216     FALSE 0.149 171.000 0.000 NA   NA
 364592 364593 S2216 S2217   rfbJ FALSE 0.179 58.000 0.021 NA   NA
 364593 364594 S2217 S2218 rfbJ rfbI FALSE 0.220 63.000 0.000 NA   NA
 364594 364595 S2218 S2219 rfbI rfc TRUE 0.862 4.000 0.000 NA   NA
 364595 364596 S2219 S2220 rfc rfbG TRUE 0.571 20.000 0.000 NA   NA
 364596 364597 S2220 S2221 rfbG rfbF TRUE 0.533 29.000 0.077 NA   NA
 364597 364598 S2221 S2222 rfbF rfbE TRUE 0.446 30.000 0.000 NA   NA
 364598 364599 S2222 S2223 rfbE rfbC TRUE 0.678 16.000 0.000 1.000   NA
 364599 364600 S2223 S2225 rfbC rfbA TRUE 0.991 4.000 0.211 1.000 Y NA
 364600 364601 S2225 S2226 rfbA rfbD TRUE 0.862 59.000 0.053 0.002 Y NA
 364601 364602 S2226 S2227 rfbD rfbB TRUE 0.995 0.000 0.084 0.002 Y NA
 364602 364603 S2227 S2228 rfbB galF FALSE 0.111 373.000 0.000 1.000 Y NA
 364603 364604 S2228 S2229 galF wcaM TRUE 0.441 175.000 0.259 NA   NA
 364604 364605 S2229 S2230 wcaM wcaL TRUE 0.955 11.000 0.292 NA   NA
 364605 364606 S2230 S2231 wcaL wcaK TRUE 0.934 -3.000 0.095 NA   NA
 364606 364607 S2231 S2232 wcaK wzxC FALSE 0.195 180.000 0.095 NA   NA
 364607 364608 S2232 S2233 wzxC wcaJ TRUE 0.976 2.000 0.304 NA   NA
 364608 364609 S2233 S2234 wcaJ cpsG TRUE 0.777 55.000 0.538 NA N NA
 364609 364610 S2234 S2235 cpsG cpsB TRUE 0.729 193.000 1.000 1.000 N NA
 364610 364611 S2235 S2236 cpsB wcaI TRUE 0.987 3.000 0.123 1.000 Y NA
 364611 364612 S2236 S2237 wcaI wcaH TRUE 0.932 -3.000 0.108 1.000 N NA
 364612 364613 S2237 S2238 wcaH wcaG TRUE 0.964 0.000 0.217 1.000 N NA
 364613 364614 S2238 S2239 wcaG gmd TRUE 0.992 3.000 0.000 0.007 Y NA
 364614 364615 S2239 S2240 gmd wcaF TRUE 0.448 26.000 0.022 1.000   NA
 364615 2179214 S2240 S2241 wcaF wcaE TRUE 0.587 19.000 0.000 NA   NA
 364616 364617 S2242 S2243     TRUE 0.996 -81.000 0.000 0.094 Y NA
 2179215 2179216 S2244 S2245 wcaD wcaC TRUE 0.931 -25.000 0.000 NA   NA
 2179216 364618 S2245 S2246 wcaC wcaB TRUE 0.899 -3.000 0.000 NA   NA
 364618 2179217 S2246 S2247 wcaB wcaA TRUE 0.870 3.000 0.000 NA   NA
 2179217 364619 S2247 S2248 wcaA   FALSE 0.199 93.000 0.000 NA   NA
 364619 364620 S2248 S2249   wzb TRUE 0.844 3.000 0.000 1.000 N NA
 364620 364621 S2249 S2250 wzb wza TRUE 0.965 6.000 0.286 1.000 N NA
 364623 364624 S2252 S2253 asmA dcd TRUE 0.479 22.000 0.057 NA N NA
 364624 364625 S2253 S2254 dcd udk TRUE 0.714 92.000 0.098 1.000 Y NA
 364626 364627 S2256 S2258   alkA FALSE 0.004 3229.000 0.000 1.000   NA
 2179220 364628 S2260 S2261     TRUE 0.839 9.000 0.000 NA   NA
 364628 364629 S2261 S2262     TRUE 0.899 -3.000 0.000 NA   NA
 364630 2179221 S2263 S2264 issfl4   TRUE 0.488 26.000 0.000 NA   NA
 2179221 2179222 S2264 S2265   yegN TRUE 0.886 0.000 0.000 NA   NA
 2179222 364631 S2265 S2266 yegN yegO TRUE 0.879 1.000 0.000 NA   NA
 364631 364632 S2266 S2267 yegO yegB TRUE 0.984 1.000 0.438 1.000 N NA
 364632 364633 S2267 S2268 yegB baeS TRUE 0.945 -3.000 0.139 1.000 N NA
 364633 364634 S2268 S2269 baeS baeR TRUE 0.998 -3.000 0.591 1.000 Y NA
 364634 364635 S2269 S2270 baeR   FALSE 0.217 152.000 0.062 NA   NA
 364635 364636 S2270 S2271   yegQ FALSE 0.128 147.000 0.008 NA   NA
 2179223 364637 S2272 S2273     TRUE 0.925 -12.000 0.000 NA   NA
 364639 364640 S2275 S2277 gatR gatD FALSE 0.174 100.000 0.000 1.000 N NA
 364640 364641 S2277 S2278 gatD   FALSE 0.369 33.000 0.000 1.000 N NA
 364641 364642 S2278 S2279     TRUE 0.996 -81.000 0.000 0.094 Y NA
 364642 364643 S2279 S2280   gatC FALSE 0.169 95.000 0.000 1.000 N NA
 364643 364644 S2280 S2281 gatC gatB TRUE 0.991 4.000 0.000 0.011 Y NA
 364644 364645 S2281 S2282 gatB gatA TRUE 0.931 31.000 0.000 0.010 Y NA
 364645 364646 S2282 S2283 gatA gatZ TRUE 0.974 10.000 0.000 1.000 Y NA
 364646 364647 S2283 S2284 gatZ gatY TRUE 0.867 29.000 0.000 1.000 Y NA
 364647 364648 S2284 S2285 gatY   FALSE 0.375 308.000 0.000 0.001 Y NA
 2179224 364649 S2286 S2287     TRUE 0.899 -3.000 0.000 NA   NA
 364650 364651 S2288 S2289 yegW yegX FALSE 0.260 48.000 0.000 1.000 N NA
 364651 364652 S2289 S2290 yegX thiD FALSE 0.180 65.000 0.000 1.000 N NA
 364652 364653 S2290 S2291 thiD thiM TRUE 0.994 -3.000 0.037 0.004 Y NA
 364653 364654 S2291 S2292 thiM yohL FALSE 0.069 223.000 0.000 NA   NA
 2179225 2179226 S2293 S2294 yohM   FALSE 0.364 39.000 0.000 NA   NA
 2179227 364655 S2295 S2296 yehA yehB TRUE 0.642 16.000 0.000 NA   NA
 364655 2179228 S2296 S2297 yehB yehC TRUE 0.642 16.000 0.000 NA   NA
 2179228 364656 S2297 S2298 yehC yehD FALSE 0.218 114.000 0.000 NA   NA
 364656 364657 S2298 S2299 yehD   FALSE 0.031 276.000 0.000 1.000 N NA
 364657 364658 S2299 S2300     TRUE 0.996 -81.000 0.000 0.094 Y NA
 364658 364659 S2300 S2301   yehE FALSE 0.203 97.000 0.000 NA   NA
 364659 364660 S2301 S2302 yehE mrp FALSE 0.043 262.000 0.000 NA   NA
 364661 2179229 S2303 S2304 metG molR FALSE 0.215 141.000 0.000 NA   NA
 2179229 2179230 S2304 S2305 molR   TRUE 0.952 -557.000 0.000 NA   NA
 2179230 2179231 S2305 S2306     FALSE 0.215 141.000 0.000 NA   NA
 2179231 2179232 S2306 S2308     FALSE 0.005 658.000 0.000 NA   NA
 2179232 2179233 S2308 S2309     FALSE 0.216 129.000 0.000 NA   NA
 2179233 2179234 S2309 S2312   yehI FALSE 0.003 3080.000 0.000 NA   NA
 2179234 364662 S2312 S2313 yehI yehL FALSE 0.004 944.000 0.000 NA   NA
 364662 364663 S2313 S2314 yehL yehM TRUE 0.796 11.000 0.000 NA   NA
 364663 364664 S2314 S2315 yehM yehP TRUE 0.919 -7.000 0.000 NA   NA
 364664 364665 S2315 S2316 yehP yehQ TRUE 0.899 -3.000 0.000 NA   NA
 364666 364667 S2317 S2318     TRUE 0.996 -81.000 0.000 0.094 Y NA
 2179235 364669 S2323 S2321 yehS   TRUE 0.952 -683.000 0.000 NA   NA
 364669 364670 S2321 S2322     TRUE 0.996 -81.000 0.000 0.093 Y NA
 364670 364671 S2322 S2324   yehT FALSE 0.009 416.000 0.000 1.000 N NA
 364671 364672 S2324 S2325 yehT yehU TRUE 0.999 -3.000 0.877 0.010 Y NA
 364675 364676 S2331 S2332     FALSE 0.320 45.000 0.000 NA   NA
 364676 364677 S2332 S2333     FALSE 0.214 125.000 0.000 NA   NA
 364677 364678 S2333 S2334     FALSE 0.230 60.000 0.000 NA   NA
 364679 364680 S2335 S2336     TRUE 0.996 -81.000 0.000 0.093 Y NA
 364680 364681 S2336 S2337     FALSE 0.016 699.000 0.000 0.066   NA
 364681 364682 S2337 S2338     FALSE 0.067 236.000 0.000 1.000   NA
 364682 2179237 S2338 S2339   yehV FALSE 0.344 42.000 0.000 NA   NA
 364685 364686 S2342 S2343 yehW yehX TRUE 0.996 5.000 0.542 1.000 Y NA
 364686 364687 S2343 S2344 yehX yehY TRUE 0.998 -7.000 0.489 1.000 Y NA
 364687 364688 S2344 S2345 yehY yehZ TRUE 0.991 7.000 0.521 0.045 N NA
 364688 364689 S2345 S2346 yehZ bglX FALSE 0.068 252.000 0.099 1.000 N NA
 364691 364692 S2348 S2349 pbpG yohC FALSE 0.311 165.000 0.145 NA   NA
 2179238 2179239 S2351 S2352 yohF yohG FALSE 0.270 53.000 0.000 NA   NA
 2179239 2179240 S2352 S2353 yohG yohH FALSE 0.200 88.000 0.000 NA   NA
 2179240 364694 S2353 S2354 yohH yohI FALSE 0.006 597.000 0.000 NA   NA
 364695 364696 S2355 S2356 yohJ yohK TRUE 0.985 -3.000 0.340 1.000   NA
 364696 364697 S2356 S2357 yohK cdd TRUE 0.459 130.000 0.198 1.000 N NA
 364697 364698 S2357 S2358 cdd sanA FALSE 0.189 150.000 0.045 NA   NA
 364698 364699 S2358 S2359 sanA   TRUE 0.816 3.000 0.019 NA   NA
 364699 364700 S2359 S2360     FALSE 0.092 194.000 0.036 NA   NA
 364700 2179241 S2360 S2361   yeiA TRUE 0.915 -6.000 0.000 NA   NA
 364701 364702 S2362 S2363 mglC mglA TRUE 0.993 16.000 0.905 1.000 Y NA
 364702 364703 S2363 S2364 mglA mglB TRUE 0.849 61.000 0.250 NA Y NA
 364703 364704 S2364 S2365 mglB galS FALSE 0.024 280.000 0.000 NA N NA
 364704 364705 S2365 S2366 galS yeiB TRUE 0.739 142.000 0.500 NA   NA
 364705 364706 S2366 S2367 yeiB folE TRUE 0.965 17.000 0.719 NA   NA
 2179243 364707 S2369 S2370 cirA lysP FALSE 0.032 292.000 0.000 NA   NA
 364707 364708 S2370 S2371 lysP yeiE FALSE 0.073 206.000 0.000 1.000 N NA
 364709 364710 S2372 S2373 yeiH nfo FALSE 0.185 74.000 0.040 NA   NA
 364710 364711 S2373 S2374 nfo yeiI TRUE 0.639 3.000 0.004 NA N NA
 364712 364713 S2375 S2376 yeiJ yeiK TRUE 0.680 100.000 0.056 1.000 Y NA
 364715 364716 S2378 S2379 yeiM yeiN FALSE 0.140 94.000 0.000 NA N NA
 364716 364717 S2379 S2380 yeiN yeiC TRUE 0.779 -12.000 0.008 NA N NA
 364717 364718 S2380 S2381 yeiC fruA FALSE 0.073 424.000 0.000 NA Y NA
 364718 364719 S2381 S2382 fruA fruK TRUE 0.988 17.000 0.562 1.000 Y NA
 364719 364720 S2382 S2383 fruK fruB TRUE 0.988 0.000 0.112 1.000 Y NA
 364722 364723 S2385 S2386     TRUE 0.996 -81.000 0.000 0.093 Y NA
 364724 364725 S2387 S2388 yeiP yeiQ FALSE 0.056 223.000 0.000 1.000 N NA
 364725 364726 S2388 S2389 yeiQ yeiR TRUE 0.423 118.000 0.167 NA   NA
 364726 364727 S2389 S2390 yeiR   TRUE 0.742 39.000 0.275 NA   NA
 364727 364728 S2390 S2391   spr FALSE 0.008 412.000 0.000 NA N NA
 364728 364729 S2391 S2392 spr rtn FALSE 0.322 181.000 0.219 NA N NA
 364729 364730 S2392 S2393 rtn yejA TRUE 0.628 82.000 0.394 NA N NA
 364730 364731 S2393 S2394 yejA yejB TRUE 0.997 1.000 0.848 0.045   NA
 364731 364732 S2394 S2395 yejB yejE TRUE 0.997 0.000 0.833 0.045   NA
 364732 364733 S2395 S2396 yejE yejF TRUE 0.993 2.000 0.758 1.000   NA
 364734 364735 S2397 S2398 yejG bcr FALSE 0.022 333.000 0.000 NA   NA
 364735 364736 S2398 S2399 bcr rsuA FALSE 0.369 28.000 0.036 1.000 N NA
 364737 364738 S2400 S2401 yejH rplY TRUE 0.427 125.000 0.024 0.011 N NA
 364740 364741 S2403 S2404 yejL yejM TRUE 0.542 20.000 0.040 NA   NA
 364741 400135 S2404 S2405 yejM proL FALSE 0.202 75.000 0.000 NA   NA
 364744 364745 S2408 S2409 ccmH dsbE TRUE 0.998 -3.000 0.578 1.000 Y NA
 364745 364746 S2409 S2410 dsbE ccmF TRUE 0.999 -3.000 0.804 0.002 Y NA
 364746 364747 S2410 S2411 ccmF ccmE TRUE 0.997 -3.000 0.211 0.002 Y NA
 364747 364748 S2411 S2412 ccmE ccmD TRUE 0.982 -3.000 0.344 1.000 N NA
 364748 364749 S2412 S2413 ccmD ccmC TRUE 0.989 -3.000 0.501 1.000 N NA
 364749 364750 S2413 S2414 ccmC ccmB TRUE 0.982 42.000 0.501 0.001 Y NA
 364750 364751 S2414 S2415 ccmB ccmA TRUE 0.999 -3.000 0.503 0.002 Y NA
 364751 364752 S2415 S2416 ccmA napC TRUE 0.653 13.000 0.043 1.000 N NA
 364752 364753 S2416 S2417 napC napB TRUE 0.998 10.000 0.490 0.003 Y NA
 364753 364754 S2417 S2418 napB napH TRUE 0.998 -3.000 0.316 0.003 Y NA
 364754 364755 S2418 S2419 napH napG TRUE 0.998 -13.000 0.795 0.003   NA
 364755 364756 S2419 S2420 napG napA TRUE 0.986 7.000 0.243 0.003   NA
 364756 364757 S2420 S2421 napA napD TRUE 0.998 -3.000 0.875 0.003 N NA
 364757 364758 S2421 S2422 napD napF TRUE 0.980 -10.000 0.209 1.000   NA
 2179244 364760 S2424 S2425 yojH yojI FALSE 0.074 218.000 0.000 NA   NA
 364760 364761 S2425 S2426 yojI alkB FALSE 0.222 76.000 0.076 1.000 N NA
 364761 364762 S2426 S2427 alkB ada TRUE 0.952 0.000 0.015 0.011 N NA
 364762 364763 S2427 S2428 ada yojL FALSE 0.111 74.000 0.019 1.000 N NA
 364763 364764 S2428 S2429 yojL ompC FALSE 0.222 112.000 0.066 1.000 N NA
 2179245 364765 S2430 S2431 micF yojN FALSE 0.027 312.000 0.000 NA   NA
 364765 364766 S2431 S2432 yojN rcsB TRUE 0.988 17.000 0.558 1.000 Y NA
 364767 364768 S2433 S2434 rcsC   FALSE 0.038 275.000 0.000 NA   NA
 364768 364769 S2434 S2435     TRUE 0.856 5.000 0.000 NA   NA
 364769 364770 S2435 S2436     TRUE 0.879 1.000 0.000 NA   NA
 364770 2179246 S2436 S2441     FALSE 0.302 48.000 0.000 NA   NA
 2179246 364771 S2441 S2438     TRUE 0.953 -2337.000 0.000 NA   NA
 364771 364772 S2438 S2440     FALSE 0.307 240.000 0.000 1.000 Y NA
 364772 364773 S2440 S2442     FALSE 0.003 2349.000 0.000 NA   NA
 364773 2179247 S2442 S2443   yfaA TRUE 0.899 -3.000 0.000 NA   NA
 2179247 364774 S2443 S2444 yfaA gyrA FALSE 0.208 101.000 0.000 NA   NA
 364776 364777 S2447 S2448     TRUE 0.991 -42.000 0.000 1.000 Y NA
 364777 364778 S2448 S2449   nrdA FALSE 0.003 871.000 0.000 1.000 N NA
 364778 364779 S2449 S2450 nrdA nrdB TRUE 0.632 234.000 0.100 0.001 Y NA
 364779 364780 S2450 S2451 nrdB yfaE TRUE 0.834 0.000 0.034 1.000 N NA
 364783 364784 S2454 S2455 glpQ glpT TRUE 0.977 5.000 0.396 1.000 N NA
 364785 364786 S2456 S2457 glpA glpB TRUE 0.998 -10.000 0.650 0.001 N NA
 364786 364787 S2457 S2458 glpB glpC TRUE 0.995 -3.000 0.547 0.044 N NA
 364787 364788 S2458 S2459 glpC yfaD FALSE 0.109 193.000 0.000 NA   NA
 364789 364790 S2460 S2461     FALSE 0.290 55.000 0.000 1.000   NA
 364790 364791 S2461 S2462     FALSE 0.151 87.000 0.005 1.000   NA
 364794 364795 S2465 S2466     TRUE 0.995 4.000 0.378 NA Y NA
 364795 364796 S2466 S2467   ybfG FALSE 0.152 431.000 0.220 NA Y NA
 364796 364797 S2467 S2468 ybfG   TRUE 0.997 -3.000 0.447 1.000 Y NA
 364797 364798 S2468 S2469     TRUE 0.824 0.000 0.031 1.000 N NA
 364798 364799 S2469 S2567     TRUE 0.974 -3.000 0.091 0.080   NA
 364799 364800 S2567 S2471     TRUE 0.991 0.000 0.613 NA   NA
 2179249 364801 S2472 S2473 pmrD menE FALSE 0.215 126.000 0.000 NA   NA
 364801 364802 S2473 S2474 menE menC TRUE 0.992 -3.000 0.283 0.001 N NA
 364802 364803 S2474 S2475 menC menB TRUE 0.996 0.000 0.171 0.001 Y NA
 364803 364804 S2475 S2476 menB yfbB TRUE 0.910 15.000 0.280 NA   NA
 364804 364805 S2476 S2477 yfbB menD TRUE 0.985 -3.000 0.355 NA   NA
 364805 364806 S2477 S2478 menD menF TRUE 0.849 89.000 0.281 1.000 Y NA
 364806 364807 S2478 S2479 menF elaB FALSE 0.192 79.000 0.043 NA   NA
 364807 364808 S2479 S2480 elaB elaA FALSE 0.320 55.000 0.077 NA   NA
 364809 364810 S2481 S2482 elaC   FALSE 0.012 436.000 0.000 1.000   NA
 364810 364811 S2482 S2483     TRUE 0.996 -81.000 0.000 0.092 Y NA
 364811 2179250 S2483 S2484   elaD TRUE 0.642 16.000 0.000 NA   NA
 2179250 2179251 S2484 S2485 elaD yfbL FALSE 0.005 654.000 0.000 NA   NA
 2179251 2179252 S2485 S2486 yfbL yfbM FALSE 0.215 106.000 0.000 NA   NA
 364812 364813 S2487 S2488 nuoN nuoM TRUE 0.998 7.000 0.437 0.002 Y NA
 364813 364814 S2488 S2489 nuoM nuoL TRUE 0.967 164.000 0.713 0.002 Y NA
 364814 364815 S2489 S2490 nuoL nuoK TRUE 0.997 -3.000 0.211 0.006 Y NA
 364815 364816 S2490 S2491 nuoK nuoJ TRUE 0.998 -3.000 0.269 0.003 Y NA
 364816 364817 S2491 S2492 nuoJ nuoI TRUE 0.996 12.000 0.428 0.006 Y NA
 364817 364818 S2492 S2493 nuoI nuoH TRUE 0.993 15.000 0.423 0.006 Y NA
 364818 364819 S2493 S2494 nuoH nuoG TRUE 0.999 -3.000 0.664 0.006 Y NA
 364819 364820 S2494 S2495 nuoG nuoF TRUE 0.926 53.000 0.180 0.003 Y NA
 364820 364821 S2495 S2496 nuoF nuoE TRUE 0.997 -3.000 0.186 0.006 Y NA
 364821 364822 S2496 S2497 nuoE nuoC TRUE 0.998 3.000 0.407 0.006 Y NA
 364822 364823 S2497 S2498 nuoC nuoB TRUE 0.972 94.000 0.691 0.003 Y NA
 364823 364824 S2498 S2499 nuoB nuoA TRUE 0.992 16.000 0.377 0.003 Y NA
 364824 364825 S2499 S2500 nuoA lrhA FALSE 0.004 631.000 0.000 1.000 N NA
 364826 364827 S2501 S2502     FALSE 0.330 84.000 0.104 1.000   NA
 364828 364829 S2503 S2504 yfbS yfbT TRUE 0.615 87.000 0.308 1.000   NA
 364829 364830 S2504 S2505 yfbT   TRUE 0.968 11.000 0.375 NA   NA
 364830 364831 S2505 S2506     TRUE 0.501 83.000 0.221 NA   NA
 364832 364833 S2507 S2508 ackA pta TRUE 0.801 75.000 0.634 1.000   NA
 364833 364834 S2508 S2509 pta yfcC FALSE 0.131 190.000 0.000 1.000   NA
 364835 364836 S2510 S2511   yfcE TRUE 0.690 58.000 0.143 0.009   NA
 364836 364837 S2511 S2512 yfcE yfcF FALSE 0.346 56.000 0.092 NA   NA
 364838 364839 S2513 S2514 yfcG folX FALSE 0.128 57.000 0.012 1.000 N NA
 364839 364840 S2514 S2515 folX   TRUE 0.735 21.000 0.122 1.000   NA
 364841 364842 S2516 S2517 yfcI hisP FALSE 0.101 197.000 0.000 NA   NA
 364842 364843 S2517 S2518 hisP hisM TRUE 0.997 8.000 0.643 1.000 Y NA
 364843 364844 S2518 S2519 hisM hisQ TRUE 0.999 -3.000 0.900 0.013 Y NA
 364844 364845 S2519 S2520 hisQ hisJ TRUE 0.973 90.000 0.833 0.045 Y NA
 364845 364846 S2520 S2521 hisJ argT TRUE 0.569 221.000 0.000 0.010 Y NA
 364846 364847 S2521 S2522 argT ubiX FALSE 0.033 266.000 0.000 1.000 N NA
 364847 364848 S2522 S2523 ubiX purF FALSE 0.187 95.000 0.056 1.000 N NA
 364848 364849 S2523 S2524 purF cvpA TRUE 0.763 37.000 0.262 1.000   NA
 364849 364850 S2524 S2525 cvpA dedD FALSE 0.079 259.000 0.116 NA   NA
 364850 364851 S2525 S2526 dedD folC TRUE 0.979 -10.000 0.216 NA   NA
 364851 364852 S2526 S2527 folC accD TRUE 0.647 70.000 0.383 1.000 N NA
 364852 364853 S2527 S2528 accD dedA FALSE 0.129 156.000 0.020 NA   NA
 364853 364854 S2528 S2529 dedA truA FALSE 0.180 83.000 0.038 NA   NA
 364854 364855 S2529 S2530 truA usg TRUE 0.847 0.000 0.040 1.000 N NA
 364855 364856 S2530 S2531 usg pdxB TRUE 0.858 66.000 0.097 0.007 Y NA
 364858 364859 S2533 S2534   fabB FALSE 0.038 255.000 0.000 1.000 N NA
 364861 364862 S2536 S2537     TRUE 0.857 34.000 0.425 NA   NA
 364862 364863 S2537 S2538   yfcA TRUE 0.950 0.000 0.153 NA   NA
 364863 364864 S2538 S2539 yfcA mepA TRUE 0.957 0.000 0.160 1.000   NA
 364864 364865 S2539 S2540 mepA aroC TRUE 0.774 4.000 0.025 1.000 N NA
 364865 364866 S2540 S2542 aroC yfcB TRUE 0.437 35.000 0.081 1.000 N NA
 2179253 2179254 S2543 S2544     TRUE 0.927 -13.000 0.000 NA   NA
 2179254 2179255 S2544 S2545     TRUE 0.899 -3.000 0.000 NA   NA
 2179255 2179256 S2545 S2546     FALSE 0.287 51.000 0.000 NA   NA
 2179256 2179257 S2546 S2547   yfcS FALSE 0.293 50.000 0.000 NA   NA
 2179257 2179258 S2547 S2548 yfcS   TRUE 0.571 20.000 0.000 NA   NA
 2179258 2179259 S2548 S2549   yfcU FALSE 0.263 54.000 0.000 NA   NA
 2179259 364868 S2549 S2550 yfcU   FALSE 0.004 786.000 0.000 NA   NA
 364868 364869 S2550 S2551     FALSE 0.033 269.000 0.000 1.000 N NA
 364869 364870 S2551 S2552     TRUE 0.996 -81.000 0.000 0.092 Y NA
 364870 364871 S2552 S2553     FALSE 0.007 495.000 0.000 1.000 N NA
 364871 364872 S2553 S2554     FALSE 0.076 203.000 0.000 1.000 N NA
 364872 364873 S2554 S2555     TRUE 0.996 0.000 0.430 1.000 Y NA
 364873 364874 S2555 S2556     FALSE 0.152 180.000 0.061 NA   NA
 364875 364876 S2557 S2558 fadL   FALSE 0.017 366.000 0.000 NA   NA
 364878 400136 S2560 S2561 yfdC argW FALSE 0.202 74.000 0.000 NA   NA
 364879 364880 S2565 S2566     TRUE 0.930 -19.000 0.000 NA   NA
 2179260 364883 S2569 S2570 dsdX dsdA TRUE 0.605 18.000 0.000 NA   NA
 364884 364885 S2571 S2572 emrY emrK TRUE 0.995 0.000 1.000 1.000   NA
 364886 364887 S2573 S2574 evgA evgS TRUE 0.991 5.000 0.000 0.009 Y NA
 364888 2179261 S2575 S2576 yfdE   FALSE 0.046 256.000 0.000 NA   NA
 2179261 364889 S2576 S2577     FALSE 0.204 70.000 0.000 NA   NA
 364889 364890 S2577 S2578     FALSE 0.400 54.000 0.134 1.000 N NA
 364890 364891 S2578 S2579     FALSE 0.008 513.000 0.000 NA   NA
 2179262 364896 S2584 S2585     TRUE 0.665 15.000 0.000 NA   NA
 364896 364897 S2585 S2586     TRUE 0.725 13.000 0.051 NA   NA
 364898 364899 S2588 S2589     TRUE 0.980 25.000 0.571 1.000 Y NA
 364900 364901 S2591 S2592     TRUE 0.995 22.000 0.875 0.010 Y NA
 364901 364902 S2592 S2593   glk TRUE 0.432 219.000 0.091 1.000 Y NA
 364903 364904 S2594 S2595     FALSE 0.217 115.000 0.000 NA   NA
 2179264 400184 S2600 S2601 yfeA alaX FALSE 0.086 208.000 0.000 NA   NA
 400184 400183 S2601 S2602 alaX alaW FALSE 0.358 40.000 0.000 NA   NA
 364909 364910 S2603 S2604 yfeC yfeD TRUE 0.827 23.000 0.000 0.005   NA
 400137 400138 S2606 S2607 valX valY FALSE 0.320 45.000 0.000 NA   NA
 400138 400139 S2607 S2608 valY lysV TRUE 0.856 5.000 0.000 NA   NA
 400139 364912 S2608 S2609 lysV flxA FALSE 0.038 276.000 0.000 NA   NA
 364915 364916 S2612 S2613 lig zipA FALSE 0.089 71.000 0.002 1.000 N NA
 364917 364918 S2614 S2615 cysZ cysK TRUE 0.603 185.000 0.122 1.000 Y NA
 364918 364919 S2615 S2616 cysK ptsH FALSE 0.007 384.000 0.019 1.000 N NA
 364919 364920 S2616 S2617 ptsH ptsI TRUE 0.892 45.000 0.000 0.010 Y NA
 364920 364921 S2617 S2618 ptsI crr TRUE 0.905 41.000 0.000 0.010 Y NA
 364923 2179265 S2620 S2621 yfeK   TRUE 0.419 33.000 0.000 NA   NA
 364924 364925 S2622 S2623 cysM cysA FALSE 0.184 134.000 0.049 1.000 N NA
 364925 364926 S2623 S2624 cysA cysW TRUE 0.988 -10.000 0.180 0.056   NA
 364926 364927 S2624 S2625 cysW cysU FALSE 0.131 426.000 0.583 1.000   NA
 364927 364928 S2625 S2626 cysU cysP TRUE 0.995 0.000 0.479 0.001 N NA
 364928 364929 S2626 S2627 cysP ucpA FALSE 0.022 304.000 0.043 1.000 N NA
 364929 364930 S2627 S2628 ucpA yfeT FALSE 0.097 187.000 0.000 1.000 N NA
 364931 364932 S2629 S2630 yfeU   TRUE 0.947 4.000 0.158 1.000   NA
 364932 2179266 S2630 S2631     TRUE 0.950 -82.000 0.000 NA   NA
 364933 364934 S2632 S2633     TRUE 0.625 96.000 0.333 NA   NA
 364934 364935 S2633 S2634     TRUE 0.510 61.000 0.204 NA   NA
 364935 364936 S2634 S2635     TRUE 0.936 -13.000 0.059 NA   NA
 364937 2179267 S2636 S2637 amiA hemF FALSE 0.217 134.000 0.000 NA   NA
 364938 364939 S2638 S2639 yfeG   FALSE 0.027 538.000 0.250 NA N NA
 364939 364940 S2639 S2641     TRUE 0.769 13.000 0.106 NA N NA
 364941 364942 S2642 S2643     FALSE 0.004 938.000 0.000 NA   NA
 364942 364943 S2643 S2644     TRUE 0.605 18.000 0.000 NA   NA
 364943 364944 S2644 S2645     TRUE 0.527 23.000 0.000 NA   NA
 364944 364945 S2645 S2646     FALSE 0.203 97.000 0.000 NA   NA
 364945 364946 S2646 S2647     FALSE 0.364 39.000 0.000 NA   NA
 364946 364947 S2647 S2648     FALSE 0.006 585.000 0.000 NA   NA
 364947 364948 S2648 S2649     FALSE 0.074 252.000 0.077 1.000   NA
 364949 364950 S2650 S2651     TRUE 0.989 27.000 0.667 0.091 Y NA
 364950 2179268 S2651 S2652     FALSE 0.007 519.000 0.000 NA   NA
 2179268 2179269 S2652 S2653     TRUE 0.931 -23.000 0.000 NA   NA
 2179269 364951 S2653 S2654     TRUE 0.931 -25.000 0.000 NA   NA
 364951 364952 S2654 S2655     TRUE 0.952 13.000 0.000 1.000 Y NA
 364952 364953 S2655 S2656     FALSE 0.074 221.000 0.070 1.000 N NA
 364954 364955 S2657 S2658 talA tktB TRUE 0.989 20.000 0.739 1.000 Y NA
 364956 364957 S2659 S2660   yffH TRUE 0.642 126.000 0.333 NA   NA
 364957 364958 S2660 S2661 yffH yffG FALSE 0.382 68.000 0.167 1.000 N NA
 2179270 364959 S2662 S2663 narQ acrD FALSE 0.064 229.000 0.000 NA   NA
 364959 364960 S2663 S2664 acrD yffB FALSE 0.006 539.000 0.000 1.000 N NA
 364960 364961 S2664 S2665 yffB dapE TRUE 0.969 4.000 0.292 1.000 N NA
 364962 364963 S2666 S2667 ypfH ypfI FALSE 0.230 74.000 0.000 1.000   NA
 364963 364964 S2667 S2668 ypfI   TRUE 0.648 15.000 0.029 1.000   NA
 364964 364965 S2668 S2669   purC FALSE 0.115 168.000 0.006 1.000   NA
 364965 364966 S2669 S2670 purC nlpB FALSE 0.040 213.000 0.019 1.000 N NA
 364966 364967 S2670 S2671 nlpB dapA TRUE 0.973 17.000 0.267 1.000 Y NA
 2179271 364968 S2672 S2673 gcvR bcp TRUE 0.886 0.000 0.000 NA   NA
 364968 364969 S2673 S2674 bcp hyfA FALSE 0.039 253.000 0.000 1.000 N NA
 364969 2179272 S2674 S2675 hyfA hyfB FALSE 0.006 578.000 0.000 NA   NA
 2179272 364970 S2675 S2676 hyfB hyfC TRUE 0.796 11.000 0.000 NA   NA
 364970 364971 S2676 S2677 hyfC hyfD TRUE 0.983 17.000 0.412 1.000 Y NA
 364971 364972 S2677 S2678 hyfD hyfE TRUE 0.986 12.000 0.093 0.006 Y NA
 364972 364973 S2678 S2679 hyfE hyfF TRUE 0.999 5.000 0.864 0.006 Y NA
 364973 2179273 S2679 S2680 hyfF hyfG TRUE 0.923 -10.000 0.000 NA   NA
 2179273 364974 S2680 S2681 hyfG hyfH TRUE 0.827 10.000 0.000 NA   NA
 364974 364975 S2681 S2682 hyfH hyfI TRUE 0.994 -3.000 0.222 1.000 Y NA
 364975 364976 S2682 S2683 hyfI   TRUE 0.986 -70.000 0.250 NA   NA
 364976 2179274 S2683 S2684   hyfR FALSE 0.287 51.000 0.000 NA   NA
 2179274 2179275 S2684 S2685 hyfR focB TRUE 0.542 22.000 0.000 NA   NA
 364978 364979 S2687 S2688     TRUE 0.867 21.000 0.259 1.000   NA
 364980 364981 S2689 S2690   uraA FALSE 0.250 50.000 0.048 1.000 N NA
 364981 364982 S2690 S2691 uraA upp TRUE 0.721 86.000 0.101 1.000 Y NA
 364983 364984 S2692 S2693 purM purN TRUE 0.997 0.000 0.230 0.002 Y NA
 364984 364985 S2693 S2694 purN ppk FALSE 0.076 172.000 0.017 1.000 N NA
 364985 364986 S2694 S2695 ppk ppx TRUE 0.996 5.000 0.486 1.000 Y NA
 364987 364988 S2697 S2698     TRUE 0.806 141.000 0.182 1.000 Y NA
 364988 364989 S2698 S2700     FALSE 0.003 1530.000 0.000 NA   NA
 364989 364990 S2700 S2701     FALSE 0.027 311.000 0.000 NA   NA
 364990 364991 S2701 S2702     TRUE 0.900 16.000 0.273 NA   NA
 364991 364992 S2702 S2703     FALSE 0.013 402.000 0.000 NA   NA
 364992 364993 S2703 S2704     FALSE 0.150 87.000 0.005 1.000   NA
 364994 364995 S2705 S2706     FALSE 0.082 211.000 0.000 NA   NA
 364995 364996 S2706 S2707   parA TRUE 0.899 -3.000 0.000 NA   NA
 364997 364998 S2708 S2709     TRUE 0.947 -3.000 0.125 NA   NA
 364998 364999 S2709 S2710     TRUE 0.993 -3.000 0.667 NA   NA
 364999 365000 S2710 S2711     TRUE 0.878 -3.000 0.000 1.000 N NA
 365001 365002 S2715 S2716   trbL FALSE 0.195 150.000 0.000 NA   NA
 365002 365003 S2716 S2718 trbL trbJ FALSE 0.055 239.000 0.000 NA   NA
 365003 365004 S2718 S2719 trbJ   FALSE 0.215 141.000 0.000 NA   NA
 365004 365005 S2719 S2720   repC FALSE 0.004 1033.000 0.000 NA   NA
 365005 365006 S2720 S2721 repC   TRUE 0.927 -13.000 0.000 NA   NA
 365006 365007 S2721 S2722     TRUE 0.951 5.000 0.002 0.005   NA
 365007 365008 S2722 S2723     TRUE 0.577 148.000 0.309 1.000 N NA
 365008 365009 S2723 S2725   guaA FALSE 0.011 305.000 0.002 1.000 N NA
 365009 365010 S2725 S2726 guaA guaB TRUE 0.914 69.000 0.190 0.001 Y NA
 365012 365013 S2728 S2729     FALSE 0.286 34.000 0.009 NA   NA
 365013 365014 S2729 S2730     TRUE 0.516 118.000 0.203 1.000   NA
 365014 365015 S2730 S2731     TRUE 0.977 11.000 0.492 1.000   NA
 365015 365016 S2731 S2732   hisS TRUE 0.888 18.000 0.259 1.000   NA
 365016 365017 S2732 S2733 hisS gcpE TRUE 0.465 103.000 0.207 1.000 N NA
 365017 365018 S2733 S2734 gcpE yfgA TRUE 0.809 27.000 0.233 1.000   NA
 365018 365019 S2734 S2735 yfgA yfgB FALSE 0.029 285.000 0.020 1.000   NA
 365019 365020 S2735 S2736 yfgB ndk FALSE 0.403 150.000 0.156 1.000   NA
 365020 2179277 S2736 S2737 ndk pbpC FALSE 0.199 149.000 0.000 NA   NA
 2179277 365021 S2737 S2738 pbpC   TRUE 0.623 17.000 0.000 NA   NA
 365022 365023 S2741 S2742 sseB pepB TRUE 0.555 142.000 0.253 NA   NA
 365023 365024 S2742 S2743 pepB yfhJ TRUE 0.487 59.000 0.171 1.000   NA
 365024 365025 S2743 S2744 yfhJ fdx TRUE 0.980 12.000 0.625 1.000   NA
 365025 365026 S2744 S2745 fdx hscA TRUE 0.992 2.000 0.794 1.000 N NA
 365026 365027 S2745 S2746 hscA yfhE TRUE 0.989 17.000 0.634 1.000 Y NA
 365027 365028 S2746 S2747 yfhE yfhF TRUE 0.743 96.000 0.500 1.000   NA
 365028 365029 S2747 S2748 yfhF   TRUE 0.971 17.000 0.359 0.002   NA
 365029 365030 S2748 S2749   yfhO TRUE 0.883 28.000 0.448 1.000 N NA
 365030 365031 S2749 S2750 yfhO   TRUE 0.692 112.000 0.424 1.000 N NA
 365031 365032 S2750 S2751     FALSE 0.067 270.000 0.126 1.000 N NA
 365033 365034 S2752 S2753 suhB   FALSE 0.154 145.000 0.003 1.000   NA
 365034 365035 S2753 S2754   csiE FALSE 0.129 191.000 0.000 1.000   NA
 365036 365037 S2755 S2756 hcaT hcaR FALSE 0.196 160.000 0.000 1.000   NA
 365038 365039 S2757 S2758 hcaA1 hcaA2 TRUE 0.993 -3.000 0.333 0.001 N NA
 365039 365040 S2758 S2759 hcaA2 hcaC TRUE 0.966 0.000 0.083 0.043 N NA
 365040 365041 S2759 S2760 hcaC hcaB TRUE 0.972 -3.000 0.083 0.024 N NA
 365041 2179279 S2760 S2761 hcaB hcaD FALSE 0.008 513.000 0.000 NA   NA
 2179279 365042 S2761 S2762 hcaD yphA TRUE 0.502 25.000 0.000 NA   NA
 365043 365044 S2763 S2764 yphB yphC TRUE 0.716 12.000 0.000 1.000 N NA
 365044 365045 S2764 S2765 yphC yphD FALSE 0.369 33.000 0.000 1.000 N NA
 365045 365046 S2765 S2766 yphD yphE TRUE 0.927 25.000 0.148 1.000 Y NA
 365046 2179280 S2766 S2767 yphE yphF TRUE 0.527 23.000 0.000 NA   NA
 2179280 2179281 S2767 S2768 yphF yphG FALSE 0.218 136.000 0.000 NA   NA
 365050 365051 S2772 S2773 glnB yfhA FALSE 0.376 61.000 0.146 1.000 N NA
 365051 365052 S2773 S2774 yfhA yfhG TRUE 0.903 -10.000 0.029 NA   NA
 365052 365053 S2774 S2775 yfhG yfhK FALSE 0.131 165.000 0.029 NA   NA
 365053 365054 S2775 S2776 yfhK purL FALSE 0.007 495.000 0.000 1.000 N NA
 365056 365057 S2778 S2779 yfhC yfhB TRUE 0.452 25.000 0.062 NA N NA
 365061 365062 S2783 S2784     FALSE 0.320 45.000 0.000 NA   NA
 365062 365063 S2784 S2785     TRUE 0.516 24.000 0.000 NA   NA
 365063 365064 S2785 S2786     FALSE 0.230 60.000 0.000 NA   NA
 365065 365066 S2787 S2788     TRUE 0.991 -42.000 0.000 1.000 Y NA
 365067 365068 S2789 S2790     TRUE 0.927 -13.000 0.000 NA   NA
 365068 365069 S2790 S2791     TRUE 0.876 2.000 0.000 NA   NA
 365070 365071 S2793 S2794     TRUE 0.806 141.000 0.182 1.000 Y NA
 365072 365073 S2795 S2796     FALSE 0.344 42.000 0.000 NA   NA
 365075 365076 S2798 S2799 acpS pdxJ TRUE 0.978 0.000 0.326 1.000 N NA
 365076 365077 S2799 S2800 pdxJ recO TRUE 0.879 12.000 0.166 1.000 N NA
 365077 365078 S2800 S2801 recO era TRUE 0.862 12.000 0.109 1.000   NA
 365078 365079 S2801 S2802 era rnc TRUE 0.981 -3.000 0.127 0.036   NA
 365079 365080 S2802 S2803 rnc lepB FALSE 0.079 272.000 0.117 1.000   NA
 365080 365081 S2803 S2804 lepB lepA TRUE 0.867 16.000 0.187 1.000   NA
 365081 365082 S2804 S2805 lepA rseC FALSE 0.065 198.000 0.045 NA N NA
 365082 365083 S2805 S2806 rseC rseB TRUE 0.998 -3.000 0.609 NA Y NA
 365083 365084 S2806 S2807 rseB rseA TRUE 0.998 0.000 0.856 NA Y NA
 365084 365085 S2807 S2808 rseA rpoE TRUE 0.912 33.000 0.705 NA N NA
 365093 365094 S2817 S2818 trxC yfiP FALSE 0.409 45.000 0.084 NA   NA
 365094 365095 S2818 S2819 yfiP yfiQ TRUE 0.750 32.000 0.222 NA   NA
 365095 365096 S2819 S2820 yfiQ pssA TRUE 0.561 114.000 0.121 0.040 N NA
 365096 365097 S2820 S2821 pssA yfiM FALSE 0.281 97.000 0.089 NA   NA
 365098 406628 S2822 S2823 kgtP rrfG FALSE 0.024 324.000 0.000 NA   NA
 406628 2179283 S2823 S2824 rrfG rrlG FALSE 0.201 95.000 0.000 NA   NA
 2179283 400182 S2824 S2825 rrlG gltW FALSE 0.107 194.000 0.000 NA   NA
 400182 408050 S2825 S2826 gltW rrsG FALSE 0.201 86.000 0.000 NA   NA
 365101 365102 S2829 S2830 sfhB yfiH TRUE 0.961 -3.000 0.168 NA   NA
 365102 365103 S2830 S2831 yfiH clpB FALSE 0.328 130.000 0.108 NA   NA
 365104 365105 S2832 S2833     TRUE 0.938 -63.000 0.000 NA   NA
 365106 365107 S2834 S2835   yfiA FALSE 0.396 35.000 0.000 NA   NA
 365107 365108 S2835 S4807 yfiA pheL FALSE 0.211 104.000 0.000 NA   NA
 365108 365109 S4807 S2836 pheL pheA FALSE 0.205 99.000 0.000 NA   NA
 365110 365111 S2837 S2838 tyrA aroF TRUE 0.968 11.000 0.000 1.000 Y NA
 365112 365113 S2839 S2840 yfiL   FALSE 0.364 150.000 0.148 NA   NA
 365113 2179284 S2840 S2841   yfiN FALSE 0.102 196.000 0.000 NA   NA
 2179284 365114 S2841 S2842 yfiN yfiB TRUE 0.642 16.000 0.000 NA   NA
 365115 365116 S2843 S2844 rplS trmD TRUE 0.963 42.000 0.567 1.000 Y NA
 365116 365117 S2844 S2845 trmD yfjA TRUE 0.979 31.000 0.672 1.000 Y NA
 365117 365118 S2845 S2846 yfjA rpsP TRUE 0.988 19.000 0.342 0.011 Y NA
 365118 365119 S2846 S2847 rpsP ffh TRUE 0.651 137.000 0.361 1.000 N NA
 365120 2179285 S2848 S2849   ypjE FALSE 0.320 45.000 0.000 NA   NA
 2179285 365121 S2849 S2850 ypjE yfjD TRUE 0.827 10.000 0.000 NA   NA
 365123 365124 S2852 S2853 yfjB recN FALSE 0.382 86.000 0.170 1.000 N NA
 365124 365125 S2853 S2854 recN smpA FALSE 0.025 338.000 0.049 1.000   NA
 365126 365127 S2855 S2856     TRUE 0.960 -10.000 0.124 NA   NA
 365128 408225 S2857 S2858 smpB ssrA FALSE 0.076 215.000 0.000 NA   NA
 408225 365129 S2858 S2859 ssrA   FALSE 0.090 205.000 0.000 NA   NA
 365129 365130 S2859 S2860     TRUE 0.451 200.000 0.000 1.000 Y NA
 365130 365131 S2860 S2861     FALSE 0.022 516.000 0.000 0.090   NA
 365131 365132 S2861 S2862     TRUE 0.899 -3.000 0.000 NA   NA
 365132 365133 S2862 S2863     TRUE 0.571 20.000 0.000 NA   NA
 2179286 2179287 S2866 S2867     TRUE 0.587 19.000 0.000 NA   NA
 2179287 2179288 S2867 S2868     FALSE 0.297 49.000 0.000 NA   NA
 2179288 2179289 S2868 S2869     FALSE 0.147 172.000 0.000 NA   NA
 2179289 365135 S2869 S2870     FALSE 0.218 139.000 0.000 NA   NA
 365135 365136 S2870 S2871     FALSE 0.021 336.000 0.000 NA   NA
 365136 365137 S2871 S2872   ygaF TRUE 0.938 -46.000 0.000 NA   NA
 365137 2179290 S2872 S2873 ygaF gabD TRUE 0.527 23.000 0.000 NA   NA
 2179290 365138 S2873 S2874 gabD gabT FALSE 0.158 167.000 0.000 NA   NA
 365138 365139 S2874 S2875 gabT gabP FALSE 0.396 238.000 0.121 1.000 Y NA
 365139 365140 S2875 S2876 gabP ygaE TRUE 0.943 21.000 0.625 1.000 N NA
 365141 365142 S2877 S2878 ygaU   FALSE 0.185 84.000 0.027 1.000   NA
 365142 365143 S2878 S2879     FALSE 0.236 101.000 0.000 1.000   NA
 365143 365144 S2879 S2880     TRUE 0.991 -42.000 0.000 1.000 Y NA
 365145 365146 S2881 S2882   ygaP TRUE 0.833 10.000 0.083 NA N NA
 2179291 365150 S2886 S2887 ygaM nrdH FALSE 0.020 347.000 0.000 NA   NA
 365150 365151 S2887 S2888 nrdH nrdI TRUE 0.790 -3.000 0.026 NA N NA
 365151 365152 S2888 S2889 nrdI nrdE TRUE 0.957 12.000 0.000 NA Y NA
 365152 365153 S2889 S2890 nrdE nrdF TRUE 0.990 10.000 0.000 0.001 Y NA
 365153 365154 S2890 S2891 nrdF proV FALSE 0.015 355.000 0.000 1.000 N NA
 365154 365155 S2891 S2892 proV proW TRUE 0.999 -7.000 0.630 0.077 Y NA
 365155 365156 S2892 S2893 proW proX TRUE 0.974 58.000 0.695 0.044 Y NA
 365156 2179292 S2893 S2895 proX   FALSE 0.110 192.000 0.000 NA   NA
 365157 365158 S2894 S2896     FALSE 0.016 344.000 0.060 NA N NA
 2179292 365157 S2895 S2894     TRUE 0.952 -959.000 0.000 NA   NA
 365158 365159 S2896 S2897   ygaH TRUE 0.996 -10.000 0.915 NA   NA
 365159 365160 S2897 S2898 ygaH emrR FALSE 0.232 91.000 0.065 NA   NA
 365160 2179293 S2898 S2899 emrR emrA FALSE 0.215 127.000 0.000 NA   NA
 2179293 365161 S2899 S2900 emrA emrB TRUE 0.623 17.000 0.000 NA   NA
 365162 365163 S2901 S2902 ygaG gshA FALSE 0.235 150.000 0.087 1.000 N NA
 365163 365164 S2902 S2903 gshA   FALSE 0.247 73.000 0.071 NA   NA
 365164 365165 S2903 S2904   yqaB TRUE 0.917 -3.000 0.067 NA   NA
 365165 400180 S2904 S2905 yqaB argQ FALSE 0.202 148.000 0.000 NA   NA
 400180 400179 S2905 S2906 argQ argZ FALSE 0.213 65.000 0.000 NA   NA
 400179 400178 S2906 S2907 argZ argY FALSE 0.213 65.000 0.000 NA   NA
 400178 400177 S2907 S2908 argY argV FALSE 0.213 65.000 0.000 NA   NA
 400177 400176 S2908 S2909 argV serV TRUE 0.862 4.000 0.000 NA   NA
 400176 365166 S2909 S2910 serV csrA FALSE 0.026 316.000 0.000 NA   NA
 365166 365167 S2910 S2911 csrA alaS FALSE 0.030 235.000 0.020 1.000 N NA
 365167 365168 S2911 S2912 alaS oraA FALSE 0.316 128.000 0.085 1.000   NA
 365168 365169 S2912 S2913 oraA recA FALSE 0.251 243.000 0.296 1.000   NA
 365169 365170 S2913 S2914 recA ygaD FALSE 0.265 80.000 0.082 NA   NA
 365170 365171 S2914 S2915 ygaD mltB FALSE 0.162 145.000 0.026 NA   NA
 2179294 365172 S2916 S2917 srlA srlE TRUE 0.899 -3.000 0.000 NA   NA
 365172 365173 S2917 S2918 srlE srlB TRUE 0.986 11.000 0.000 0.010 Y NA
 365173 365174 S2918 S2919 srlB srlD TRUE 0.816 4.000 0.040 1.000 N NA
 365174 365175 S2919 S2920 srlD gutM TRUE 0.429 105.000 0.197 NA N NA
 365175 365176 S2920 S2921 gutM srlR TRUE 0.794 67.000 0.183 NA Y NA
 365176 365177 S2921 S2922 srlR gutQ TRUE 0.992 -7.000 0.562 1.000 N NA
 365179 365180 S2924 S2925   ygbD TRUE 0.970 -3.000 0.000 0.042   NA
 365181 365182 S2926 S2927 hypF hydN FALSE 0.099 153.000 0.018 1.000 N NA
 365182 365183 S2927 S2928 hydN ascG TRUE 0.579 149.000 0.316 1.000 N NA
 365183 365184 S2928 S2929 ascG hycF TRUE 0.688 14.000 0.000 NA   NA
 365184 365185 S2929 S2930 hycF hycE TRUE 0.943 10.000 0.200 NA   NA
 365185 365186 S2930 S2931 hycE hycD TRUE 0.968 18.000 0.235 1.000 Y NA
 365186 365187 S2931 S2932 hycD hycC TRUE 0.995 3.000 0.382 1.000 Y NA
 365187 365188 S2932 S2933 hycC hycB TRUE 0.889 37.000 0.154 1.000 Y NA
 365188 365189 S2933 S2934 hycB hycA FALSE 0.214 125.000 0.000 NA   NA
 365190 365191 S2935 S2936 hypA hypB TRUE 0.991 4.000 0.306 0.001   NA
 365191 365192 S2936 S2937 hypB hypC TRUE 0.992 -9.000 0.139 NA Y NA
 365192 365193 S2937 S2938 hypC hypD TRUE 0.979 0.000 0.021 NA Y NA
 365193 365194 S2938 S2939 hypD hypE TRUE 0.944 39.000 0.353 1.000 Y NA
 365194 365195 S2939 S2940 hypE fhlA FALSE 0.110 74.000 0.019 1.000 N NA
 365196 365197 S2941 S2942 ygbA   FALSE 0.220 63.000 0.000 NA   NA
 365197 365198 S2942 S2943     TRUE 0.996 -81.000 0.000 0.089 Y NA
 365199 2179295 S2944 S2945 mutS pphB FALSE 0.215 106.000 0.000 NA   NA
 2179296 2179297 S2947 S2948     TRUE 0.899 -3.000 0.000 NA   NA
 2179297 365201 S2948 S2949     FALSE 0.216 64.000 0.000 NA   NA
 365201 365202 S2949 S2950     TRUE 0.806 141.000 0.182 1.000 Y NA
 365203 365204 S2951 S2952     TRUE 0.991 2.000 0.667 NA   NA
 365206 365207 S2954 S2955 yclC padI TRUE 0.982 0.000 0.000 NA Y NA
 2179298 365209 S2957 S2958 rpoS nlpD FALSE 0.220 63.000 0.000 NA   NA
 365209 365210 S2958 S2959 nlpD pcm FALSE 0.143 140.000 0.030 1.000 N NA
 365210 365211 S2959 S2960 pcm surE TRUE 0.988 -6.000 0.353 1.000   NA
 365211 365212 S2960 S2961 surE ygbO TRUE 0.984 -19.000 0.235 1.000   NA
 365212 365213 S2961 S2962 ygbO ygbB TRUE 0.965 -3.000 0.173 1.000   NA
 365213 365214 S2962 S2963 ygbB ygbP TRUE 0.996 0.000 0.419 1.000 Y NA
 365214 365215 S2963 S2964 ygbP   TRUE 0.804 19.000 0.185 1.000 N NA
 365215 365216 S2964 S2965   ygbE FALSE 0.083 194.000 0.028 NA   NA
 365216 365217 S2965 S2966 ygbE cysC TRUE 0.588 50.000 0.198 NA   NA
 365217 365218 S2966 S2967 cysC cysN TRUE 0.995 0.000 0.340 1.000 Y NA
 365218 365219 S2967 S2968 cysN cysD TRUE 0.996 2.000 0.574 0.000 N NA
 2179299 365221 S2970 S2971 ygcB cysH FALSE 0.005 667.000 0.000 NA   NA
 365221 365222 S2971 S2972 cysH cysI FALSE 0.289 74.000 0.116 1.000 N NA
 365222 365223 S2972 S2973 cysI cysJ TRUE 0.999 0.000 0.791 0.000 Y NA
 365224 365225 S2974 S2975 ygcM ygcN FALSE 0.165 48.000 0.014 1.000 N NA
 365225 365226 S2975 S2976 ygcN ygcO TRUE 0.995 -45.000 0.026 0.042 Y NA
 365226 2179300 S2976 S2977 ygcO ygcP TRUE 0.623 17.000 0.000 NA   NA
 365227 365228 S2978 S2979 ygcQ ygcR TRUE 0.997 -36.000 0.102 0.015 Y NA
 365228 365229 S2979 S2980 ygcR ygcS TRUE 0.973 -22.000 0.182 1.000 N NA
 365229 365230 S2980 S2981 ygcS   TRUE 0.844 22.000 0.250 NA   NA
 365231 365232 S2982 S2983     TRUE 0.996 -81.000 0.000 0.089 Y NA
 365234 365235 S2985 S2986     TRUE 0.996 -81.000 0.000 0.089 Y NA
 365235 2179301 S2986 S2987   ygcG TRUE 0.623 17.000 0.000 NA   NA
 365236 365237 S2988 S2989 eno pyrG FALSE 0.207 88.000 0.068 1.000 N NA
 365237 365238 S2989 S2990 pyrG mazG FALSE 0.058 228.000 0.025 1.000   NA
 365238 365239 S2990 S2991 mazG relA FALSE 0.213 96.000 0.040 1.000   NA
 365239 365240 S2991 S2992 relA ygcA FALSE 0.343 48.000 0.082 1.000 N NA
 365242 365243 S2994 S2995 ygcX ygcY TRUE 0.965 21.000 0.000 0.000 Y NA
 365243 365244 S2995 S2996 ygcY   TRUE 0.851 2.000 0.000 1.000 N NA
 365244 365245 S2996 S2997     FALSE 0.008 434.000 0.000 1.000 N NA
 365245 365246 S2997 S2998   yqcB TRUE 0.834 18.000 0.209 1.000 N NA
 365246 365247 S2998 S2999 yqcB   TRUE 0.989 0.000 0.518 NA   NA
 365247 2179302 S2999 S3000   csrB FALSE 0.333 43.000 0.000 NA   NA
 2179302 365248 S3000 S3001 csrB syd FALSE 0.082 211.000 0.000 NA   NA
 365249 365250 S3002 S3003 yqcD ygdH FALSE 0.278 112.000 0.079 NA   NA
 365250 365251 S3003 S3004 ygdH   FALSE 0.210 102.000 0.000 NA   NA
 365251 365252 S3004 S3005   sdaC FALSE 0.005 560.000 0.000 1.000 N NA
 365252 365253 S3005 S3006 sdaC sdaB TRUE 0.713 58.000 0.000 1.000 Y NA
 365253 365254 S3006 S3007 sdaB exo TRUE 0.504 21.000 0.000 1.000 N NA
 365255 365256 S3008 S3009 fucO fucA TRUE 0.471 28.000 0.066 1.000 N NA
 365257 365258 S3010 S3011 fucP fucI TRUE 0.883 33.000 0.104 1.000 Y NA
 365258 2179303 S3011 S3012 fucI fucK FALSE 0.219 109.000 0.000 NA   NA
 2179303 365259 S3012 S3013 fucK fucU TRUE 0.876 2.000 0.000 NA   NA
 365259 365260 S3013 S3014 fucU fucR TRUE 0.889 58.000 0.308 1.000 Y NA
 365261 365262 S3015 S3016 ygdE ygdD TRUE 0.963 -7.000 0.144 NA   NA
 365262 365263 S3016 S3017 ygdD gcvA TRUE 0.669 19.000 0.081 NA   NA
 365263 365264 S3017 S3018 gcvA   FALSE 0.019 351.000 0.000 NA   NA
 365265 365266 S3019 S3020   ygdK TRUE 0.983 0.000 0.122 0.001   NA
 365267 365268 S3021 S3022 ygdL mltA FALSE 0.024 238.000 0.009 1.000 N NA
 400140 400141 S3023 S3024 metZ metW FALSE 0.407 34.000 0.000 NA   NA
 365271 365272 S3027 S3028 recD recB TRUE 0.999 0.000 0.688 0.001 Y NA
 365272 365273 S3028 S3029 recB ptr TRUE 0.938 -7.000 0.092 1.000 N NA
 365273 365274 S3029 S3030 ptr recC FALSE 0.178 176.000 0.092 1.000 N NA
 365274 365275 S3030 S3031 recC ppdC TRUE 0.708 13.000 0.076 NA N NA
 365275 365276 S3031 S3032 ppdC ygdB TRUE 0.993 -15.000 0.538 NA   NA
 365276 365277 S3032 S3033 ygdB ppdB TRUE 0.985 -3.000 0.373 NA   NA
 365277 2179304 S3033 S3034 ppdB ppdA TRUE 0.922 -9.000 0.000 NA   NA
 2179304 365278 S3034 S3035 ppdA thyA FALSE 0.122 184.000 0.000 NA   NA
 365278 365279 S3035 S3036 thyA lgt TRUE 0.928 7.000 0.164 1.000 N NA
 365279 365280 S3036 S3037 lgt ptsP FALSE 0.161 151.000 0.000 1.000 N NA
 365280 365281 S3037 S3038 ptsP ygdP TRUE 0.513 13.000 0.008 1.000 N NA
 365282 365283 S3039 S3040 mutH   FALSE 0.181 69.000 0.052 1.000 N NA
 365283 365284 S3040 S3041     TRUE 0.713 138.000 0.429 NA   NA
 365284 365285 S3041 S3042     FALSE 0.206 108.000 0.043 NA   NA
 365286 365287 S3043 S3044 ygeD aas TRUE 0.958 -7.000 0.124 NA   NA
 365291 365292 S3048 S3049 ygeA araE FALSE 0.107 129.000 0.011 1.000 N NA
 365292 365293 S3049 S3050 araE kduD FALSE 0.021 315.000 0.000 1.000 N NA
 365293 365294 S3050 S3051 kduD kduI TRUE 0.783 30.000 0.269 1.000 N NA
 365294 365295 S3051 S3052 kduI yqeF FALSE 0.028 287.000 0.000 1.000 N NA
 365296 2179305 S3053 S3054   yqeH FALSE 0.013 400.000 0.000 NA   NA
 2179305 365297 S3054 S3055 yqeH   FALSE 0.213 65.000 0.000 NA   NA
 365297 365298 S3055 S3056     TRUE 0.913 -3.000 0.000 1.000   NA
 2179306 365299 S3057 S3059     FALSE 0.005 632.000 0.000 NA   NA
 365299 365300 S3059 S3060     FALSE 0.202 84.000 0.000 NA   NA
 365300 365301 S3060 S3062     FALSE 0.030 298.000 0.000 NA   NA
 365301 365302 S3062 S3063     FALSE 0.004 1119.000 0.000 NA   NA
 365302 365303 S3063 S3064     FALSE 0.214 119.000 0.000 NA   NA
 365303 400175 S3064 S3066   glyU FALSE 0.218 135.000 0.000 NA   NA
 400175 365304 S3066 S3067 glyU   FALSE 0.202 79.000 0.000 NA   NA
 365305 365306 S3068 S3069   ygeT TRUE 0.998 11.000 0.500 0.000 Y NA
 365306 365307 S3069 S3070 ygeT   TRUE 0.999 -3.000 0.667 0.042 Y NA
 365307 365308 S3070 S3071     FALSE 0.185 113.000 0.000 1.000 N NA
 365308 365309 S3071 S3072     TRUE 0.996 -81.000 0.000 0.088 Y NA
 365309 365310 S3072 S3073   ygfU FALSE 0.008 432.000 0.000 1.000 N NA
 365310 365311 S3073 S3074 ygfU   FALSE 0.040 250.000 0.000 1.000 N NA
 365312 365313 S3075 S3076 lysS prfB TRUE 0.992 10.000 0.162 0.037 Y NA
 365313 365314 S3076 S3077 prfB recJ FALSE 0.126 91.000 0.028 1.000 N NA
 365314 365315 S3077 S3078 recJ dsbC TRUE 0.874 6.000 0.082 1.000 N NA
 365315 365316 S3078 S3079 dsbC xerD TRUE 0.539 25.000 0.079 1.000 N NA
 365318 365319 S3081 S3082   ygfY TRUE 0.940 -19.000 0.061 NA   NA
 365321 2179307 S3084 S3085   yqfB FALSE 0.166 164.000 0.000 NA   NA
 365323 365324 S3087 S3088 ygfF gcvP FALSE 0.017 267.000 0.006 1.000 N NA
 365324 365325 S3088 S3089 gcvP gcvH TRUE 0.847 119.000 0.249 1.000 Y NA
 365325 365326 S3089 S3090 gcvH gcvT TRUE 0.986 24.000 0.317 0.001 Y NA
 365326 365327 S3090 S3091 gcvT visC FALSE 0.004 448.000 0.004 1.000 N NA
 365327 365328 S3091 S3092 visC ubiH TRUE 0.991 23.000 0.474 0.001 Y NA
 365328 365329 S3092 S3093 ubiH pepP TRUE 0.834 -3.000 0.026 1.000 N NA
 365329 365330 S3093 S3094 pepP ygfB TRUE 0.447 26.000 0.036 NA   NA
 365331 2179308 S3095 S3096 ygfE ssrS FALSE 0.344 42.000 0.000 NA   NA
 2179308 365332 S3096 S3097 ssrS ygfA FALSE 0.202 75.000 0.000 NA   NA
 365333 365334 S3098 S3099 serA rpiA FALSE 0.028 256.000 0.029 1.000 N NA
 365334 2179309 S3099 S3100 rpiA yqfE FALSE 0.235 59.000 0.000 NA   NA
 365335 365336 S3101 S3102 iciA sbm FALSE 0.075 204.000 0.000 1.000 N NA
 365336 365337 S3102 S3103 sbm ygfD TRUE 0.987 -7.000 0.366 1.000 N NA
 365337 365338 S3103 S3104 ygfD ygfG TRUE 0.646 11.000 0.015 1.000 N NA
 365338 2179310 S3104 S3105 ygfG ygfH TRUE 0.516 24.000 0.000 NA   NA
 365339 365340 S3106 S3107 ygfI yggE FALSE 0.138 167.000 0.037 NA   NA
 365340 365341 S3107 S3108 yggE yggA FALSE 0.250 93.000 0.075 NA   NA
 365341 365342 S3108 S3109 yggA yggB FALSE 0.249 139.000 0.049 1.000   NA
 365342 365343 S3109 S3110 yggB fba FALSE 0.080 191.000 0.038 1.000 N NA
 365343 365344 S3110 S3111 fba pgk TRUE 0.615 215.000 0.056 0.004 Y NA
 365344 365345 S3111 S3112 pgk epd TRUE 0.895 50.000 0.070 0.004 Y NA
 365346 365347 S3113 S3114     TRUE 0.656 23.000 0.103 NA   NA
 365347 365348 S3114 S3115     TRUE 0.990 1.000 0.605 NA   NA
 365348 365349 S3115 S3116     TRUE 0.879 1.000 0.000 NA   NA
 365349 365350 S3116 S3117     TRUE 0.951 -12.000 0.093 NA   NA
 365350 365351 S3117 S3118     TRUE 0.997 -6.000 0.214 0.013 Y NA
 2179311 365352 S3119 S3120 yggC yggD TRUE 0.899 -3.000 0.000 NA   NA
 365352 365353 S3120 S3121 yggD yggF TRUE 0.923 22.000 0.545 NA N NA
 365353 365354 S3121 S3122 yggF   TRUE 0.989 -3.000 0.500 1.000 N NA
 365354 2179312 S3122 S3123   yggP TRUE 0.467 28.000 0.000 NA   NA
 2179312 365355 S3123 S3124 yggP   TRUE 0.571 20.000 0.000 NA   NA
 365355 365356 S3124 S3125     TRUE 0.996 -81.000 0.000 0.088 Y NA
 365360 365361 S3129 S3130 speB   FALSE 0.218 136.000 0.000 NA   NA
 365361 365362 S3130 S3131     TRUE 0.488 26.000 0.000 NA   NA
 365362 365363 S3131 S3132     TRUE 0.996 -81.000 0.000 0.088 Y NA
 365363 365364 S3132 S3133   speA FALSE 0.172 147.000 0.000 1.000 N NA
 365364 365365 S3133 S3134 speA yqgB TRUE 0.839 9.000 0.000 NA   NA
 365368 365369 S3137 S3138 metK galP FALSE 0.007 476.000 0.000 1.000 N NA
 365369 365370 S3138 S3139 galP sprT FALSE 0.217 77.000 0.042 1.000   NA
 365370 365371 S3139 S3140 sprT endA TRUE 0.504 95.000 0.210 1.000   NA
 365371 365372 S3140 S3141 endA yggJ TRUE 0.472 80.000 0.201 NA   NA
 365372 365373 S3141 S3142 yggJ gshB TRUE 0.878 13.000 0.173 NA   NA
 365373 365374 S3142 S3143 gshB yqgE FALSE 0.289 109.000 0.120 NA N NA
 365374 365375 S3143 S3144 yqgE yqgF TRUE 0.969 0.000 0.263 NA N NA
 365377 365378 S3145 S3147 yggS yggT TRUE 0.836 18.000 0.189 NA   NA
 365378 365379 S3147 S3148 yggT yggU TRUE 0.927 -3.000 0.081 NA   NA
 365379 365380 S3148 S3149 yggU yggV TRUE 0.773 8.000 0.016 NA   NA
 365380 365381 S3149 S3150 yggV yggW TRUE 0.975 -7.000 0.218 1.000 N NA
 365381 365382 S3150 S3151 yggW   FALSE 0.031 314.000 0.000 1.000   NA
 365382 365383 S3151 S3152     TRUE 0.871 17.000 0.000 0.010   NA
 365383 365384 S3152 S3153     TRUE 0.910 45.000 0.286 NA Y NA
 365387 365388 S3156 S3157 yggM ansB FALSE 0.151 117.000 0.018 NA   NA
 365388 365389 S3157 S3158 ansB yggN FALSE 0.108 176.000 0.027 NA   NA
 365389 365390 S3158 S3159 yggN yggL FALSE 0.247 187.000 0.155 NA   NA
 365390 365391 S3159 S3160 yggL yggH TRUE 0.924 0.000 0.092 NA   NA
 365392 365393 S3161 S3162 mutY yggX TRUE 0.621 28.000 0.150 NA N NA
 365393 365394 S3162 S3163 yggX mltC FALSE 0.311 62.000 0.128 NA N NA
 365394 365395 S3163 S3164 mltC nupG FALSE 0.200 154.000 0.056 NA   NA
 365397 400142 S3166 S3167 yqgA pheV FALSE 0.215 106.000 0.000 NA   NA
 400142 365398 S3167 S4822 pheV   FALSE 0.100 198.000 0.000 NA   NA
 365398 365399 S4822 S3169     FALSE 0.011 453.000 0.000 1.000   NA
 365399 365400 S3169 S4823     FALSE 0.003 1349.000 0.000 NA   NA
 365400 365401 S4823 S4824   sigA FALSE 0.018 361.000 0.000 NA   NA
 365401 365402 S4824 S3177 sigA   FALSE 0.004 3074.000 0.000 1.000   NA
 365403 365404 S3178 S3180 pic   FALSE 0.004 1634.000 0.000 1.000   NA
 365404 365405 S3180 S3181     TRUE 0.983 -6.000 0.000 0.000   NA
 365405 365406 S3181 S3184     FALSE 0.028 1086.000 0.000 1.000 Y NA
 365406 365407 S3184 S3185     FALSE 0.036 283.000 0.000 NA   NA
 365407 365408 S3185 S3186     TRUE 0.899 -3.000 0.000 NA   NA
 365408 365409 S3186 S3187     FALSE 0.016 373.000 0.000 NA   NA
 365410 365411 S3188 S3189     TRUE 0.991 -42.000 0.000 1.000 Y NA
 365411 365412 S3189 S3190     FALSE 0.003 1854.000 0.000 1.000 N NA
 365412 365413 S3190 S3191     FALSE 0.229 86.000 0.000 1.000   NA
 365415 365416 S4826 S3193   sap TRUE 0.748 110.000 0.500 NA   NA
 365416 365417 S3193 S3194 sap   FALSE 0.022 334.000 0.000 NA   NA
 365417 365418 S3194 S3195     FALSE 0.215 106.000 0.000 NA   NA
 365418 365419 S3195 S3196     FALSE 0.214 121.000 0.000 NA   NA
 365419 365420 S3196 S3197     FALSE 0.202 76.000 0.000 NA   NA
 365420 365421 S3197 S3199     FALSE 0.012 411.000 0.000 NA   NA
 365421 365422 S3199 S3200     FALSE 0.021 342.000 0.000 NA   NA
 365422 365423 S3200 S3201   yeeS TRUE 0.879 1.000 0.000 NA   NA
 365423 365424 S3201 S3202 yeeS yeeT FALSE 0.200 87.000 0.000 NA   NA
 365424 365425 S3202 S3203 yeeT yeeU FALSE 0.202 80.000 0.000 NA   NA
 365425 365426 S3203 S3204 yeeU yeeV FALSE 0.308 47.000 0.000 NA   NA
 365426 365427 S3204 S3205 yeeV yeeW TRUE 0.899 -3.000 0.000 NA   NA
 365427 365428 S3205 S3207 yeeW   FALSE 0.029 302.000 0.000 NA   NA
 365428 365429 S3207 S3209     FALSE 0.003 1425.000 0.000 NA   NA
 365429 365430 S3209 S3210     TRUE 0.913 -3.000 0.000 1.000   NA
 365431 365432 S3211 S3212     FALSE 0.218 135.000 0.000 NA   NA
 365432 365433 S3212 S3213     FALSE 0.183 115.000 0.000 1.000 N NA
 365433 365434 S3213 S3214     TRUE 0.996 -81.000 0.000 0.087 Y NA
 365434 365435 S3214 S3215   yghK FALSE 0.003 1403.000 0.000 1.000 N NA
 365435 365436 S3215 S3216 yghK glcB FALSE 0.129 355.000 0.000 1.000 Y NA
 365436 365437 S3216 S3217 glcB glcG TRUE 0.554 22.000 0.052 NA   NA
 365437 2179313 S3217 S3218 glcG glcF TRUE 0.856 5.000 0.000 NA   NA
 2179313 2179314 S3218 S3219 glcF glcD TRUE 0.886 0.000 0.000 NA   NA
 365439 365440 S3222 S3223     TRUE 0.734 15.000 0.096 1.000 N NA
 365440 365441 S3223 S3224     TRUE 0.502 33.000 0.064 1.000   NA
 365441 365442 S3224 S3225     TRUE 0.932 0.000 0.091 1.000   NA
 365442 365443 S3225 S3226     TRUE 0.741 33.000 0.000 0.012   NA
 365444 365445 S3227 S3228     TRUE 0.996 -3.000 0.631 0.065   NA
 365445 365446 S3228 S3229     TRUE 0.437 31.000 0.000 NA   NA
 365446 365447 S3229 S3230     TRUE 0.757 12.000 0.000 NA   NA
 365447 365448 S3230 S3231   yghQ TRUE 0.992 0.000 0.667 NA   NA
 365448 365449 S3231 S3232 yghQ yghR TRUE 0.877 46.000 0.667 NA   NA
 365449 365450 S3232 S3233 yghR yghS TRUE 0.428 32.000 0.000 NA   NA
 365452 365453 S3235 S3236 pitB gsp FALSE 0.026 292.000 0.000 1.000 N NA
 365455 365456 S3238 S3239 hybG hybF FALSE 0.217 134.000 0.000 NA   NA
 365456 365457 S3239 S3240 hybF hybE TRUE 0.925 -7.000 0.055 NA   NA
 365457 365458 S3240 S3241 hybE hybD TRUE 0.984 -7.000 0.291 NA   NA
 365458 365459 S3241 S3242 hybD hybC TRUE 0.998 0.000 0.828 1.000 Y NA
 365459 365460 S3242 S3243 hybC hybB TRUE 0.985 -3.000 0.000 NA Y NA
 365460 365461 S3243 S3244 hybB hybA TRUE 0.989 -10.000 0.000 NA Y NA
 365461 365462 S3244 S3245 hybA   TRUE 0.999 3.000 0.615 0.014 Y NA
 365462 365463 S3245 S3246     FALSE 0.150 189.000 0.077 NA   NA
 365463 365464 S3246 S3247     FALSE 0.149 119.000 0.017 NA   NA
 365464 2179316 S3247 S3248     TRUE 0.848 7.000 0.000 NA   NA
 365467 365468 S3251 S3252 yghA   FALSE 0.140 176.000 0.000 NA   NA
 365469 365470 S3253 S3254 exbD exbB TRUE 0.999 7.000 0.810 0.053 Y NA
 365470 365471 S3254 S3255 exbB   TRUE 0.918 -7.000 0.048 NA   NA
 365472 365473 S3256 S3257 metC yghB TRUE 0.510 140.000 0.212 NA   NA
 365475 365476 S3258 S3260 yqhD dkgA TRUE 0.509 105.000 0.200 1.000   NA
 365476 365477 S3260 S3261 dkgA yqhG FALSE 0.095 200.000 0.000 NA   NA
 365477 365478 S3261 S3262 yqhG yqhH FALSE 0.287 51.000 0.000 NA   NA
 365479 2179317 S3263 S3264   ygiR TRUE 0.587 19.000 0.000 NA   NA
 2179317 365480 S3264 S3265 ygiR sufI FALSE 0.219 111.000 0.000 NA   NA
 365480 365481 S3265 S3266 sufI plsC FALSE 0.354 75.000 0.154 1.000 N NA
 365481 365482 S3266 S3267 plsC parC FALSE 0.046 234.000 0.043 1.000 N NA
 365482 365483 S3267 S3268 parC   FALSE 0.039 546.000 0.005 NA Y NA
 365483 365484 S3268 S3269   ygiW FALSE 0.285 53.000 0.053 NA   NA
 365485 365486 S3270 S3271 ygiX ygiY TRUE 0.998 -3.000 0.526 1.000 Y NA
 365488 365489 S3273 S3274 mdaB ygiN TRUE 0.712 31.000 0.025 0.023   NA
 365490 365491 S3275 S3276 parE yqiA TRUE 0.765 29.000 0.217 NA   NA
 365491 365492 S3276 S3277 yqiA icc TRUE 0.986 0.000 0.427 NA   NA
 365492 365493 S3277 S3278 icc yqiB TRUE 0.902 25.000 0.433 NA   NA
 365493 365494 S3278 S3279 yqiB yqiE TRUE 0.985 1.000 0.443 NA   NA
 365495 365496 S3280 S3281 tolC ygiA TRUE 0.886 0.000 0.000 NA   NA
 365496 365497 S3281 S3282 ygiA ygiB TRUE 0.964 -112.000 0.080 NA   NA
 365497 365498 S3282 S3283 ygiB ygiC TRUE 0.988 6.000 0.632 NA   NA
 365502 365503 S3287 S3288     FALSE 0.046 256.000 0.000 NA   NA
 365503 365504 S3288 S3289     TRUE 0.991 -42.000 0.000 1.000 Y NA
 365504 365505 S3289 S3290     TRUE 0.758 51.000 0.000 1.000 Y NA
 365505 365506 S3290 S3291     TRUE 0.996 -81.000 0.000 0.087 Y NA
 365506 365507 S3291 S3292     TRUE 0.827 10.000 0.000 NA   NA
 365507 2179318 S3292 S3293   yqiI TRUE 0.665 15.000 0.000 NA   NA
 365509 2179319 S3295 S3297     FALSE 0.011 414.000 0.000 NA   NA
 365510 365511 S3298 S3299   glnE FALSE 0.344 48.000 0.083 1.000 N NA
 365511 365512 S3299 S3300 glnE ygiF TRUE 0.583 23.000 0.053 1.000   NA
 365513 365514 S3301 S3302 ygiM cca FALSE 0.265 64.000 0.106 NA N NA
 365515 365516 S3303 S3304 bacA ygiG FALSE 0.308 91.000 0.128 1.000 N NA
 365519 365520 S3307 S3308 ttdA ttdB TRUE 0.981 28.000 0.667 1.000 Y NA
 365520 365521 S3308 S3309 ttdB ygjE FALSE 0.226 48.000 0.037 1.000 N NA
 365523 365524 S3311 S3312 rpsU dnaG FALSE 0.225 111.000 0.067 1.000 N NA
 365524 365525 S3312 S3313 dnaG rpoD FALSE 0.374 195.000 0.299 1.000 N NA
 365525 365526 S3313 S3314 rpoD   FALSE 0.122 172.000 0.000 1.000 N NA
 365529 365530 S3322 S3323 ebgR ebgA FALSE 0.214 183.000 0.136 1.000 N NA
 365530 365531 S3323 S3324 ebgA ebgC TRUE 0.999 -3.000 0.682 0.000 Y NA
 365531 365532 S3324 S3325 ebgC ygjI TRUE 0.685 63.000 0.412 1.000 N NA
 365532 2179324 S3325 S3326 ygjI ygjJ FALSE 0.217 134.000 0.000 NA   NA
 2179324 365533 S3326 S3327 ygjJ ygjK TRUE 0.623 17.000 0.000 NA   NA
 365533 365534 S3327 S3328 ygjK ygjL FALSE 0.078 226.000 0.000 1.000   NA
 365535 365536 S3329 S3330 ygjM ygjN TRUE 0.986 -3.000 0.375 NA   NA
 365536 365537 S3330 S3331 ygjN ygjO FALSE 0.035 285.000 0.000 NA   NA
 365538 365539 S3332 S3333 ygjP ygjQ FALSE 0.144 77.000 0.019 NA   NA
 365539 365540 S3333 S3334 ygjQ ygjR FALSE 0.163 61.000 0.019 NA   NA
 365540 365541 S3334 S3335 ygjR ygjT FALSE 0.046 271.000 0.000 1.000   NA
 365541 365542 S3335 S3336 ygjT ygjU FALSE 0.005 585.000 0.000 1.000 N NA
 365543 365544 S3337 S3338 ygjV uxaA FALSE 0.340 83.000 0.126 NA   NA
 365544 365545 S3338 S3339 uxaA uxaC TRUE 0.951 15.000 0.092 1.000 Y NA
 365547 365548 S3341 S3342     FALSE 0.009 453.000 0.000 NA   NA
 365549 365550 S3343 S3344     TRUE 0.996 -81.000 0.000 0.086 Y NA
 365550 365551 S3344 S3345   exuR FALSE 0.184 108.000 0.000 1.000 N NA
 365551 365552 S3345 S3346 exuR yqjA FALSE 0.020 345.000 0.000 NA   NA
 365552 365553 S3346 S3347 yqjA yqjB TRUE 0.942 19.000 0.529 NA   NA
 365553 2179325 S3347 S3348 yqjB yqjC FALSE 0.217 132.000 0.000 NA   NA
 2179325 365554 S3348 S3349 yqjC yqjD FALSE 0.199 93.000 0.000 NA   NA
 365554 365555 S3349 S3350 yqjD yqjE TRUE 0.956 3.000 0.185 NA   NA
 365555 365556 S3350 S3351 yqjE   TRUE 0.975 -10.000 0.185 NA   NA
 365556 2179326 S3351 S3352   yqjF FALSE 0.202 96.000 0.000 NA   NA
 2179326 365557 S3352 S3353 yqjF yqjG FALSE 0.204 70.000 0.000 NA   NA
 365557 365558 S3353 S3354 yqjG yhaH FALSE 0.037 293.000 0.000 1.000   NA
 365560 365561 S3357 S3358 yhaK yhaL FALSE 0.383 23.000 0.005 NA   NA
 365562 365563 S3359 S3360 yhaM yhaN TRUE 0.921 -64.000 0.029 NA   NA
 365563 365564 S3360 S3361 yhaN yhaO TRUE 0.690 28.000 0.157 NA   NA
 365564 365565 S3361 S3363 yhaO   FALSE 0.237 275.000 0.000 1.000 Y NA
 365565 365566 S3363 S3365   yhaR FALSE 0.321 72.000 0.150 NA N NA
 365566 365567 S3365 S3366 yhaR tdcE TRUE 0.591 14.000 0.000 NA N NA
 365567 365568 S3366 S3367 tdcE tdcD TRUE 0.941 34.000 0.286 1.000 Y NA
 365568 365569 S3367 S3368 tdcD tdcC TRUE 0.922 14.000 0.308 1.000 N NA
 365569 365570 S3368 S3369 tdcC tdcB TRUE 0.892 22.000 0.029 1.000 Y NA
 365570 365571 S3369 S3370 tdcB tdcA FALSE 0.122 99.000 0.023 1.000 N NA
 365572 2179327 S3371 S3372 tdcR yhaB FALSE 0.008 491.000 0.000 NA   NA
 2179327 2179328 S3372 S3373 yhaB yhaC TRUE 0.502 25.000 0.000 NA   NA
 2179328 365573 S3373 S3374 yhaC   FALSE 0.101 197.000 0.000 NA   NA
 407486 365574 S3375 S3376 rnpB yhaD TRUE 0.419 33.000 0.000 NA   NA
 365574 365575 S3376 S3377 yhaD garR FALSE 0.352 97.000 0.152 1.000 N NA
 365575 2179329 S3377 S3378 garR yhaF TRUE 0.446 30.000 0.000 NA   NA
 2179329 365576 S3378 S3379 yhaF yhaU TRUE 0.642 16.000 0.000 NA   NA
 365579 365580 S3382 S3383 agaZ agaV TRUE 0.996 -13.000 0.280 1.000 Y NA
 365580 365581 S3383 S3384 agaV agaW TRUE 0.998 11.000 0.905 0.012 Y NA
 365581 365582 S3384 S3385 agaW agaE TRUE 0.999 -10.000 0.619 0.012 Y NA
 365582 365583 S3385 S3386 agaE agaF TRUE 0.970 87.000 0.692 0.012 Y NA
 365583 365584 S3386 S3387 agaF agaA TRUE 0.946 -3.000 0.104 1.000   NA
 365584 365585 S3387 S3388 agaA   TRUE 0.497 29.000 0.000 1.000   NA
 365585 365586 S3388 S3389     TRUE 0.996 -81.000 0.000 0.086 Y NA
 365586 2179330 S3389 S3390   agaB TRUE 0.542 22.000 0.000 NA   NA
 2179330 365587 S3390 S3391 agaB agaC FALSE 0.364 39.000 0.000 NA   NA
 365587 365588 S3391 S3392 agaC agaD TRUE 0.999 -10.000 0.444 0.010 Y NA
 365588 365589 S3392 S3393 agaD agaI TRUE 0.985 1.000 0.080 1.000 Y NA
 365590 365591 S3394 S3395     TRUE 0.996 -81.000 0.000 0.086 Y NA
 2179331 365592 S3396 S3397 yraH yraI FALSE 0.202 80.000 0.000 NA   NA
 365592 2179332 S3397 S3398 yraI yraJ TRUE 0.456 29.000 0.000 NA   NA
 365593 365594 S3399 S3401     FALSE 0.011 439.000 0.000 1.000   NA
 365597 365598 S3405 S3406 yraM yraN TRUE 0.978 -42.000 0.172 1.000   NA
 365598 365599 S3406 S3407 yraN yraO TRUE 0.797 20.000 0.187 1.000 N NA
 365599 365600 S3407 S3408 yraO yraP TRUE 0.985 10.000 0.613 NA   NA
 365601 365602 S3409 S3410 yraQ yraR FALSE 0.198 73.000 0.045 NA   NA
 365606 365607 S3414 S3415 yhbS yhbT TRUE 0.985 -6.000 0.295 1.000   NA
 365608 365609 S3416 S3417 yhbU yhbV TRUE 0.999 9.000 0.948 0.003 Y NA
 365609 365610 S3417 S3418 yhbV yhbW FALSE 0.127 81.000 0.041 NA N NA
 365611 365612 S3419 S3420 mtr deaD FALSE 0.088 154.000 0.009 1.000 N NA
 365612 365613 S3420 S3421 deaD yhbM FALSE 0.159 180.000 0.053 1.000   NA
 365613 365614 S3421 S3422 yhbM pnp FALSE 0.294 109.000 0.071 1.000   NA
 365614 365615 S3422 S3423 pnp rpsO TRUE 0.815 178.000 0.335 1.000 Y NA
 365615 365616 S3423 S3424 rpsO truB TRUE 0.814 149.000 0.211 1.000 Y NA
 365616 365617 S3424 S3425 truB rbfA TRUE 0.995 0.000 0.318 1.000 Y NA
 365617 365618 S3425 S3426 rbfA infB TRUE 0.900 164.000 0.530 1.000 Y NA
 365618 365619 S3426 S3427 infB nusA TRUE 0.862 25.000 0.342 1.000 N NA
 365619 365620 S3427 S3428 nusA yhbC TRUE 0.940 28.000 0.759 NA   NA
 365620 400174 S3428 S3429 yhbC metY FALSE 0.087 207.000 0.000 NA   NA
 365622 400173 S3431 S3432 yhbX leuU FALSE 0.003 1603.000 0.000 NA   NA
 400173 365623 S3432 S3433 leuU secG TRUE 0.665 15.000 0.000 NA   NA
 365623 365624 S3433 S3434 secG mrsA FALSE 0.032 228.000 0.016 1.000 N NA
 365624 365625 S3434 S3435 mrsA folP TRUE 0.980 -7.000 0.260 1.000 N NA
 365625 365626 S3435 S3436 folP ftsH TRUE 0.589 90.000 0.325 1.000 N NA
 365626 365627 S3436 S3437 ftsH ftsJ FALSE 0.356 100.000 0.152 1.000 N NA
 365631 365632 S3441 S3442 yhbZ yhbE TRUE 0.582 16.000 0.015 1.000   NA
 365632 365633 S3442 S3443 yhbE rpmA FALSE 0.183 127.000 0.019 1.000   NA
 365633 365634 S3443 S3444 rpmA rplU TRUE 0.994 21.000 0.667 0.010 Y NA
 365635 365636 S3445 S3446 ispB nlp FALSE 0.044 227.000 0.000 NA N NA
 365637 365638 S3447 S3448 murA yrbA TRUE 0.574 55.000 0.258 NA N NA
 365638 365639 S3448 S3449 yrbA yrbB TRUE 0.712 145.000 0.453 NA   NA
 365639 365640 S3449 S3450 yrbB yrbC TRUE 0.991 -96.000 0.308 NA   NA
 365640 365641 S3450 S3451 yrbC vpsC TRUE 0.826 19.000 0.188 NA   NA
 365641 365642 S3451 S3452 vpsC vpsB TRUE 0.987 5.000 0.562 NA   NA
 365642 365643 S3452 S3453 vpsB vpsA TRUE 0.996 8.000 0.530 NA Y NA
 365644 365645 S3454 S3455 yrbG yrbH TRUE 0.891 14.000 0.226 1.000 N NA
 365645 365646 S3455 S3456 yrbH yrbI TRUE 0.948 21.000 0.598 1.000   NA
 365646 365647 S3456 S3457 yrbI yrbK TRUE 0.992 -3.000 0.617 NA   NA
 365647 365648 S3457 S3458 yrbK yhbN TRUE 0.992 -31.000 0.459 NA   NA
 365648 365649 S3458 S3459 yhbN yhbG TRUE 0.985 7.000 0.543 NA   NA
 365649 365650 S3459 S3460 yhbG rpoN TRUE 0.557 48.000 0.163 1.000   NA
 365650 365651 S3460 S3461 rpoN yhbH TRUE 0.951 23.000 0.820 NA N NA
 365651 365652 S3461 S3462 yhbH ptsN TRUE 0.802 118.000 0.728 NA N NA
 365652 365653 S3462 S3463 ptsN yhbJ TRUE 0.598 46.000 0.186 NA   NA
 365653 365654 S3463 S3464 yhbJ ptsO TRUE 0.966 -3.000 0.182 NA   NA
 365654 365655 S3464 S3465 ptsO yrbL FALSE 0.046 213.000 0.007 NA   NA
 2179333 365656 S3466 S3467 mtgA yhbL TRUE 0.899 -3.000 0.000 NA   NA
 365656 365657 S3467 S3468 yhbL arcB FALSE 0.042 230.000 0.000 NA N NA
 365657 365658 S3468 S3469 arcB yhcC FALSE 0.343 96.000 0.113 1.000   NA
 365659 365660 S3470 S3471 gltB gltD TRUE 0.986 13.000 0.096 0.000 Y NA
 365660 2179334 S3471 S3472 gltD yhcG FALSE 0.122 184.000 0.000 NA   NA
 2179334 365661 S3472 S3473 yhcG   FALSE 0.007 558.000 0.000 NA   NA
 365662 365663 S3474 S3475 yhcH yhcI TRUE 0.985 -3.000 0.000 NA Y NA
 365663 365664 S3475 S3476 yhcI yhcJ TRUE 0.985 -3.000 0.000 NA Y NA
 365664 365665 S3476 S3477 yhcJ nanT TRUE 0.772 48.000 0.000 1.000 Y NA
 365665 365666 S3477 S3478 nanT nanA TRUE 0.611 110.000 0.318 1.000 N NA
 365666 365667 S3478 S3479 nanA yhcK FALSE 0.181 122.000 0.000 1.000 N NA
 365668 365669 S3480 S3481     TRUE 0.996 -81.000 0.000 0.085 Y NA
 365669 365670 S3481 S3482   yhcL TRUE 0.504 21.000 0.000 1.000 N NA
 365671 365672 S3483 S3484 sspB sspA TRUE 0.992 6.000 0.831 NA   NA
 365672 365673 S3484 S3485 sspA rpsI FALSE 0.006 395.000 0.014 1.000 N NA
 365673 365674 S3485 S3486 rpsI rplM TRUE 0.995 16.000 0.601 0.010 Y NA
 365674 365675 S3486 S3487 rplM yhcM FALSE 0.041 219.000 0.003 NA   NA
 365676 2179335 S3488 S3489 yhcB degQ FALSE 0.184 154.000 0.000 NA   NA
 2179335 365677 S3489 S3490 degQ degS FALSE 0.199 90.000 0.000 NA   NA
 365679 365680 S3492 S3493 argR yhcN FALSE 0.026 314.000 0.000 NA   NA
 365681 365682 S3494 S3495 yhcO yhcP FALSE 0.156 92.000 0.027 NA   NA
 365682 365683 S3495 S3496 yhcP yhcQ TRUE 0.989 6.000 0.667 NA   NA
 365683 365684 S3496 S3497 yhcQ yhcR TRUE 0.900 8.000 0.100 NA   NA
 365686 365687 S3499 S3500 tldD yhdP FALSE 0.184 156.000 0.050 NA   NA
 365687 2179336 S3500 S3501 yhdP yhdR TRUE 0.587 19.000 0.000 NA   NA
 2179336 365688 S3501 S3502 yhdR cafA FALSE 0.207 68.000 0.000 NA   NA
 365688 365689 S3502 S3503 cafA yhdE TRUE 0.989 -10.000 0.417 NA N NA
 365689 365690 S3503 S3504 yhdE mreD TRUE 0.938 9.000 0.206 NA N NA
 365690 365691 S3504 S3505 mreD mreC TRUE 0.913 207.000 0.550 0.002 Y NA
 365691 365692 S3505 S3506 mreC mreB TRUE 0.803 66.000 0.689 1.000 N NA
 365692 365693 S3506 S3507 mreB yhdA FALSE 0.023 305.000 0.000 1.000 N NA
 365696 365697 S3510 S3511 accB accC TRUE 0.996 11.000 0.275 0.000 Y NA
 365697 365698 S3511 S3512 accC yhdT FALSE 0.324 109.000 0.103 NA   NA
 365698 365699 S3512 S3513 yhdT panF TRUE 0.995 -10.000 0.682 NA   NA
 365699 365700 S3513 S3514 panF prmA TRUE 0.693 12.000 0.041 1.000 N NA
 365700 365701 S3514 S3515 prmA yhdG FALSE 0.066 452.000 0.042 1.000 Y NA
 365701 365702 S3515 S3516 yhdG fis TRUE 0.685 26.000 0.161 1.000 N NA
 365702 365703 S3516 S3517 fis yhdJ TRUE 0.621 86.000 0.016 1.000 Y NA
 365703 2179337 S3517 S3518 yhdJ yhdU FALSE 0.202 84.000 0.000 NA   NA
 365704 365705 S3519 S3520     TRUE 0.996 -81.000 0.000 0.085 Y NA
 365706 2179338 S3521 S3522 yhdW yhdX FALSE 0.207 68.000 0.000 NA   NA
 365707 365708 S3523 S3524     TRUE 0.996 -81.000 0.000 0.085 Y NA
 365709 365710 S3526 S3527 yhdY yhdZ TRUE 0.998 8.000 0.734 0.052 Y NA
 2179339 400172 S3528 S3529 rrfF thrV FALSE 0.352 41.000 0.000 NA   NA
 400172 406630 S3529 S3530 thrV rrfD TRUE 0.717 13.000 0.000 NA   NA
 406630 2179340 S3530 S3531 rrfD rrlD FALSE 0.201 95.000 0.000 NA   NA
 2179340 400171 S3531 S3532 rrlD alaU FALSE 0.122 184.000 0.000 NA   NA
 400171 400170 S3532 S3533 alaU ileU FALSE 0.333 43.000 0.000 NA   NA
 400170 408051 S3533 S3534 ileU rrsD FALSE 0.205 69.000 0.000 NA   NA
 365712 365713 S3536 S3537 yrdB aroE TRUE 0.892 -3.000 0.043 NA   NA
 365713 365714 S3537 S3538 aroE yrdC TRUE 0.866 5.000 0.087 NA N NA
 365714 365715 S3538 S3539 yrdC yrdD TRUE 0.909 5.000 0.137 NA N NA
 365715 365716 S3539 S3540 yrdD smg TRUE 0.704 53.000 0.331 NA   NA
 365716 365717 S3540 S3542 smg smf TRUE 0.962 -13.000 0.124 NA   NA
 365718 365719 S3543 S3544 def fmt TRUE 0.972 15.000 0.058 0.016 Y NA
 365719 365720 S3544 S3545 fmt sun TRUE 0.919 46.000 0.305 1.000 Y NA
 365720 365721 S3545 S3546 sun trkA TRUE 0.666 22.000 0.122 1.000 N NA
 365721 365722 S3546 S3547 trkA   FALSE 0.107 181.000 0.000 1.000 N NA
 365722 365723 S3547 S3548     TRUE 0.899 -3.000 0.000 NA   NA
 365723 365724 S3548 S3549     TRUE 0.899 -3.000 0.000 NA   NA
 365726 365727 S3551 S3552 pgi yjbE FALSE 0.009 463.000 0.000 NA   NA
 365727 365728 S3552 S3553 yjbE yjbF TRUE 0.822 84.000 0.778 NA   NA
 365728 365729 S3553 S3554 yjbF yjbG TRUE 0.995 -3.000 1.000 NA   NA
 365729 365730 S3554 S3555 yjbG yjbH TRUE 0.945 0.000 0.140 NA   NA
 365730 365731 S3555 S3556 yjbH yjbA FALSE 0.006 595.000 0.000 NA   NA
 365732 365733 S3557 S3558 xylE malG FALSE 0.019 371.000 0.000 1.000   NA
 365733 365734 S3558 S3559 malG malF TRUE 0.996 15.000 0.814 0.041 Y NA
 365734 365735 S3559 S3560 malF malE TRUE 0.638 154.000 0.000 1.000 Y NA
 365736 365737 S3561 S3562 malK lamB TRUE 0.838 75.000 0.111 0.052 Y NA
 365737 365738 S3562 S3563 lamB malM FALSE 0.370 152.000 0.143 1.000   NA
 365738 2179341 S3563 S3564 malM yjbl FALSE 0.008 484.000 0.000 NA   NA
 2179341 365739 S3564 S3565 yjbl ubiC FALSE 0.067 226.000 0.000 NA   NA
 365739 365740 S3565 S3566 ubiC ubiA TRUE 0.979 13.000 0.248 NA Y NA
 365742 365743 S3568 S3569 dgkA lexA FALSE 0.354 110.000 0.141 1.000 N NA
 365743 365744 S3569 S3570 lexA dinF FALSE 0.138 73.000 0.033 1.000 N NA
 365744 365745 S3570 S3571 dinF yjbJ FALSE 0.158 116.000 0.021 NA   NA
 365747 365748 S3573 S3574 yjbM yjbN FALSE 0.015 381.000 0.000 NA   NA
 365748 365749 S3574 S3575 yjbN pspG FALSE 0.263 134.000 0.070 NA   NA
 365751 365752 S3577 S3578 dnaB alr TRUE 0.673 53.000 0.317 1.000 N NA
 365752 365753 S3578 S3579 alr tyrB FALSE 0.117 253.000 0.181 1.000 N NA
 365753 365754 S3579 S3580 tyrB aphA FALSE 0.003 1109.000 0.026 1.000   NA
 365754 365755 S3580 S3581 aphA yjbQ FALSE 0.141 111.000 0.009 NA   NA
 365755 365756 S3581 S3582 yjbQ yjbR TRUE 0.804 4.000 0.018 NA   NA
 365759 365760 S3585 S3586     TRUE 0.996 -81.000 0.000 0.085 Y NA
 365760 365761 S3586 S3587   yjcB FALSE 0.204 70.000 0.000 NA   NA
 365763 365764 S3590 S3591 soxR yjcD FALSE 0.006 706.000 0.000 1.000   NA
 365764 365765 S3591 S3592 yjcD yjcE FALSE 0.356 151.000 0.130 1.000   NA
 365766 365767 S3593 S3594 yjcF yjcG FALSE 0.136 178.000 0.000 NA   NA
 365767 365768 S3594 S3595 yjcG yjcH TRUE 0.994 -3.000 0.733 NA   NA
 365768 2179343 S3595 S3596 yjcH acs FALSE 0.095 200.000 0.000 NA   NA
 365769 365770 S3597 S3598 nrfA nrfB TRUE 0.749 45.000 0.083 0.001   NA
 365770 365771 S3598 S3599 nrfB nrfC TRUE 0.979 -3.000 0.049 0.001   NA
 365771 365772 S3599 S3600 nrfC nrfD TRUE 0.998 -3.000 0.927 0.001 N NA
 365772 365773 S3600 S3601 nrfD nrfE TRUE 0.652 80.000 0.400 1.000 N NA
 365773 365774 S3601 S3602 nrfE nrfF TRUE 0.995 -7.000 0.214 NA Y NA
 365774 365775 S3602 S3603 nrfF nrfG TRUE 0.997 -3.000 0.464 NA Y NA
 365775 365776 S3603 S3604 nrfG gltP FALSE 0.017 342.000 0.000 1.000 N NA
 365777 2179344 S3605 S3606 yjcO fdhF FALSE 0.217 115.000 0.000 NA   NA
 2179344 365778 S3606 S3607 fdhF yjcP FALSE 0.100 198.000 0.000 NA   NA
 365778 365779 S3607 S2587 yjcP yjcQ TRUE 0.992 -3.000 0.625 NA   NA
 365779 365780 S2587 S3608 yjcQ yjcR TRUE 0.995 0.000 1.000 NA   NA
 365781 365782 S3609 S3610     TRUE 0.996 -81.000 0.000 0.084 Y NA
 365783 365784 S3611 S3612 phnE phnD TRUE 0.690 55.000 0.330 NA   NA
 365784 365785 S3612 S3613 phnD phnC TRUE 0.987 25.000 0.337 0.000 Y NA
 365785 365786 S3613 S3614 phnC phnB FALSE 0.268 133.000 0.074 NA   NA
 365786 365787 S3614 S3615 phnB phnA FALSE 0.116 158.000 0.013 NA   NA
 365788 365789 S3616 S3617 yjdA yjcZ TRUE 0.945 30.000 0.857 NA   NA
 365789 365790 S3617 S3618 yjcZ proP FALSE 0.041 264.000 0.000 NA   NA
 365791 365792 S3619 S3620 basS basR TRUE 0.994 1.000 0.143 0.073 Y NA
 365792 365793 S3620 S3621 basR yjdB TRUE 0.942 -3.000 0.095 1.000   NA
 365793 365794 S3621 S3622 yjdB yjdE FALSE 0.230 74.000 0.000 1.000   NA
 365794 365795 S3622 S3623 yjdE adiY FALSE 0.397 137.000 0.167 1.000 N NA
 365795 365796 S3623 S3624 adiY adiA FALSE 0.019 325.000 0.000 1.000 N NA
 365796 365797 S3624 S3625 adiA melR FALSE 0.081 199.000 0.000 1.000 N NA
 365798 365799 S3626 S3627 melA melB TRUE 0.831 115.000 0.214 1.000 Y NA
 365800 365801 S3628 S3629 yjdF fumB FALSE 0.214 123.000 0.000 NA   NA
 365801 365802 S3629 S3630 fumB dcuB FALSE 0.229 78.000 0.000 1.000   NA
 365802 365803 S3630 S3631 dcuB yjdG FALSE 0.008 571.000 0.000 1.000   NA
 365803 365804 S3631 S3632 yjdG yjdH TRUE 0.994 -3.000 0.086 0.052 Y NA
 365805 365806 S3633 S3634     TRUE 0.991 -42.000 0.000 1.000 Y NA
 365808 365809 S3636 S3637 sorC sorD FALSE 0.252 70.000 0.091 1.000 N NA
 365809 365810 S3637 S3638 sorD sorF TRUE 0.854 10.000 0.083 1.000 N NA
 365810 365811 S3638 S3639 sorF sorB TRUE 0.996 0.000 0.167 0.010 Y NA
 365811 365812 S3639 S3640 sorB sorA TRUE 0.948 123.000 0.400 0.012 Y NA
 365812 365813 S3640 S3641 sorA sorM TRUE 0.995 11.000 0.333 0.012 Y NA
 365813 365814 S3641 S3642 sorM sorE TRUE 0.650 52.000 0.286 1.000 N NA
 365814 365815 S3642 S3643 sorE pepE FALSE 0.104 382.000 0.000 1.000 Y NA
 365816 365817 S3644 S3645 yjbB metH FALSE 0.030 220.000 0.006 1.000 N NA
 365818 2179345 S3646 S3647 iclR arp FALSE 0.005 703.000 0.000 NA   NA
 2179346 365819 S3648 S3649 aceK aceA FALSE 0.122 184.000 0.000 NA   NA
 365819 2179347 S3649 S3650 aceA aceB TRUE 0.446 30.000 0.000 NA   NA
 2179347 365820 S3650 S3651 aceB metA FALSE 0.040 269.000 0.000 NA   NA
 406631 2179348 S3653 S3654 rrfE rrlE FALSE 0.201 95.000 0.000 NA   NA
 2179348 400169 S3654 S3655 rrlE gltV FALSE 0.107 194.000 0.000 NA   NA
 400169 408052 S3655 S3656 gltV rrsE FALSE 0.201 86.000 0.000 NA   NA
 365822 365823 S3657 S3658 purH purD TRUE 0.984 12.000 0.238 1.000 Y NA
 365824 365825 S3659 S3660 hydG hydH TRUE 0.998 -3.000 0.500 0.065 Y NA
 365827 365828 S3662 S3663 yjaH hupA TRUE 0.951 13.000 0.375 NA   NA
 365828 365829 S3663 S3664 hupA yjaG TRUE 0.487 187.000 0.355 NA   NA
 365829 365830 S3664 S3665 yjaG nfi TRUE 0.426 43.000 0.086 NA   NA
 365830 365831 S3665 S3666 nfi hemE FALSE 0.111 157.000 0.028 1.000 N NA
 365831 365832 S3666 S3667 hemE yjaD FALSE 0.284 40.000 0.040 1.000 N NA
 365833 365834 S3668 S3669 yjaE thiC FALSE 0.049 234.000 0.000 1.000 N NA
 365834 365835 S3669 S3670 thiC thiE TRUE 0.994 0.000 0.063 0.003 Y NA
 365835 365836 S3670 S3671 thiE thiF TRUE 0.996 -7.000 0.242 1.000 Y NA
 365836 365837 S3671 S3672 thiF thiG TRUE 0.643 186.000 0.005 0.017 Y NA
 365837 365838 S3672 S3673 thiG thiH TRUE 0.998 -3.000 0.277 0.003 Y NA
 365839 365840 S3674 S3675 rpoC rpoB TRUE 0.938 77.000 0.851 0.000   NA
 365840 365841 S3675 S3676 rpoB rplL FALSE 0.102 320.000 0.223 1.000   NA
 365841 365842 S3676 S3677 rplL rplJ TRUE 0.978 67.000 0.884 0.010 Y NA
 365842 365843 S3677 S3678 rplJ rplA FALSE 0.362 413.000 0.302 0.014 Y NA
 365843 365844 S3678 S3679 rplA rplK TRUE 0.999 4.000 0.838 0.014 Y NA
 365844 365845 S3679 S3680 rplK nusG TRUE 0.757 159.000 0.681 1.000 N NA
 365845 365846 S3680 S3681 nusG secE TRUE 0.993 2.000 0.843 1.000 N NA
 365846 365847 S3681 S3682 secE tufB FALSE 0.027 230.000 0.009 1.000 N NA
 365847 400168 S3682 S3683 tufB thrT FALSE 0.217 115.000 0.000 NA   NA
 400168 400167 S3683 S3684 thrT glyT TRUE 0.848 7.000 0.000 NA   NA
 400167 400166 S3684 S3685 glyT tyrU FALSE 0.216 117.000 0.000 NA   NA
 400166 400165 S3685 S3686 tyrU thrU TRUE 0.839 9.000 0.000 NA   NA
 365848 365849 S3687 S3688   coaA FALSE 0.048 211.000 0.007 NA   NA
 365850 365851 S3689 S3690 birA murB TRUE 0.968 -3.000 0.211 1.000 N NA
 365851 406632 S3690 S3691 murB rrfB FALSE 0.215 127.000 0.000 NA   NA
 406632 2179349 S3691 S3692 rrfB rrlB FALSE 0.201 95.000 0.000 NA   NA
 2179349 400164 S3692 S3693 rrlB gltT FALSE 0.107 194.000 0.000 NA   NA
 400164 408053 S3693 S3694 gltT rrsB FALSE 0.201 86.000 0.000 NA   NA
 408053 365852 S3694 S3695 rrsB murI FALSE 0.016 374.000 0.000 NA   NA
 365852 365853 S3695 S3696 murI btuB TRUE 0.893 -55.000 0.025 1.000 N NA
 365855 365856 S3698 S3699 yijD yijC TRUE 0.963 0.000 0.194 NA   NA
 2179351 365859 S3703 S3704 yjjL   TRUE 0.952 -1118.000 0.000 NA   NA
 365859 365860 S3704 S3705     TRUE 0.996 -81.000 0.000 0.084 Y NA
 365860 365861 S3705 S3707     FALSE 0.007 488.000 0.000 1.000 N NA
 365861 365862 S3707 S3708     FALSE 0.010 408.000 0.000 1.000 N NA
 365862 365863 S3708 S3709   argH FALSE 0.077 202.000 0.000 1.000 N NA
 365863 365864 S3709 S3710 argH argB TRUE 0.657 61.000 0.017 1.000 Y NA
 365864 365865 S3710 S3711 argB argC TRUE 0.990 11.000 0.097 0.002 Y NA
 365866 365867 S3712 S3713 argE ppc FALSE 0.017 352.000 0.053 1.000 N NA
 365867 365868 S3713 S3714 ppc yijP FALSE 0.145 183.000 0.000 1.000   NA
 365868 365869 S3714 S3715 yijP yijO FALSE 0.369 149.000 0.130 1.000   NA
 365870 365871 S3716 S3717 frwD pflC TRUE 0.940 2.000 0.156 1.000 N NA
 365871 365872 S3717 S3718 pflC pflD TRUE 0.995 -34.000 0.312 0.002 N NA
 365872 365873 S3718 S3719 pflD frwB TRUE 0.651 51.000 0.280 1.000 N NA
 365873 365874 S3719 S3720 frwB frwC TRUE 0.993 15.000 0.400 0.009 Y NA
 365874 2179352 S3720 S3721 frwC yijI FALSE 0.010 440.000 0.000 NA   NA
 2179353 2179354 S3722 S3723 ptsA talC TRUE 0.757 12.000 0.000 NA   NA
 2179354 2179355 S3723 S3724 talC gldA FALSE 0.023 329.000 0.000 NA   NA
 2179355 2179356 S3724 S3725 gldA yijF FALSE 0.010 439.000 0.000 NA   NA
 2179357 365875 S3726 S3727 yijE katG FALSE 0.202 73.000 0.000 NA   NA
 365875 365876 S3727 S3728 katG metF FALSE 0.010 329.000 0.010 1.000 N NA
 365876 365877 S3728 S3729 metF metL FALSE 0.115 349.000 0.017 1.000 Y NA
 365877 365878 S3729 S3730 metL metB TRUE 0.996 3.000 0.428 1.000 Y NA
 365879 365880 S3731 S3732 metJ yiiX FALSE 0.122 184.000 0.000 NA   NA
 365882 365883 S3734 S3735 priA cytR FALSE 0.090 156.000 0.013 1.000 N NA
 365883 365884 S3735 S3736 cytR ftsN TRUE 0.498 92.000 0.245 1.000 N NA
 365884 365885 S3736 S3737 ftsN hslV FALSE 0.295 93.000 0.122 1.000 N NA
 365885 365886 S3737 S3738 hslV hslU TRUE 0.997 10.000 0.752 1.000 Y NA
 365886 365887 S3738 S3739 hslU menA FALSE 0.182 67.000 0.051 1.000 N NA
 365887 365888 S3739 S3740 menA menG TRUE 0.754 93.000 0.158 NA Y NA
 365890 365891 S3742 S3743 glpF glpK FALSE 0.028 224.000 0.004 1.000 N NA
 365891 365892 S3743 S3744 glpK glpX FALSE 0.035 230.000 0.025 1.000 N NA
 365892 365893 S3744 S3745 glpX fpr FALSE 0.292 97.000 0.117 1.000 N NA
 365894 365895 S3746 S3747 yiiT yiiS TRUE 0.477 27.000 0.000 NA   NA
 365895 2179358 S3747 S3748 yiiS yiiR FALSE 0.080 212.000 0.000 NA   NA
 365896 365897 S3749 S3750 yiiQ tpiA FALSE 0.242 108.000 0.058 NA   NA
 365898 365899 S3751 S3752 cdh sbp FALSE 0.183 107.000 0.000 1.000 N NA
 365899 365900 S3752 S3753 sbp pfkA FALSE 0.021 320.000 0.049 1.000 N NA
 365900 365901 S3753 S3754 pfkA yiiP FALSE 0.071 199.000 0.040 1.000 N NA
 365901 365902 S3754 S3755 yiiP cpxP TRUE 0.622 148.000 0.031 NA Y NA
 365902 2179359 S3755 S3756 cpxP   TRUE 0.951 -116.000 0.000 NA   NA
 365903 365904 S3757 S3758 cpxR cpxA TRUE 0.998 -3.000 0.791 1.000 Y NA
 365906 365907 S3760 S3761     TRUE 0.991 -42.000 0.000 1.000 Y NA
 365908 365909 S3762 S3763 kdgT sodA FALSE 0.051 260.000 0.000 1.000   NA
 365910 365911 S3765 S3766 rhaR rhaS TRUE 0.999 -16.000 0.800 0.016 Y NA
 365912 365913 S3767 S3768 rhaB rhaA TRUE 0.997 -3.000 0.387 1.000 Y NA
 365913 365914 S3768 S3769 rhaA rhaD FALSE 0.178 425.000 0.247 1.000 Y NA
 365914 365915 S3769 S3770 rhaD yiiL TRUE 0.896 10.000 0.112 NA   NA
 365915 365916 S3770 S3771 yiiL frvA FALSE 0.030 301.000 0.000 NA   NA
 365916 365917 S3771 S3772 frvA frvB TRUE 0.986 11.000 0.000 0.009 Y NA
 365917 365918 S3772 S3773 frvB frvX TRUE 0.999 -10.000 0.667 NA Y NA
 365918 365919 S3773 S3774 frvX frvR TRUE 0.984 0.000 0.400 NA   NA
 365919 365920 S3774 S3775 frvR   TRUE 0.447 34.000 0.000 1.000   NA
 365920 365921 S3775 S3776     TRUE 0.996 -81.000 0.000 0.084 Y NA
 365923 365924 S3778 S3779 fdoG fdoH TRUE 0.998 13.000 0.833 0.001 Y NA
 365924 365925 S3779 S3780 fdoH fdoI TRUE 0.999 -3.000 0.944 0.001 Y NA
 365925 365926 S3780 S3781 fdoI fdhE TRUE 0.956 -3.000 0.182 NA N NA
 365927 365928 S3782 S3783 yiiF yiiE FALSE 0.074 218.000 0.000 NA   NA
 365928 365929 S3783 S4827 yiiE   FALSE 0.005 652.000 0.000 NA   NA
 365929 365930 S4827 S4828     FALSE 0.175 158.000 0.000 NA   NA
 365931 365932 S3784 S3785     TRUE 0.996 -81.000 0.000 0.083 Y NA
 365933 365934 S3786 S3787 yiiD yihZ TRUE 0.926 -3.000 0.065 1.000   NA
 365934 365935 S3787 S3788 yihZ rbn TRUE 0.929 -3.000 0.069 1.000   NA
 365935 365936 S3788 S3789 rbn yihX TRUE 0.927 -6.000 0.000 1.000   NA
 365936 365937 S3789 S3790 yihX yihW FALSE 0.233 99.000 0.000 1.000   NA
 365937 365938 S3790 S3791 yihW yihV TRUE 0.843 34.000 0.000 1.000 Y NA
 365939 365940 S3792 S3793 yihU yihT TRUE 0.815 24.000 0.250 1.000 N NA
 365940 365941 S3793 S3794 yihT yihS TRUE 0.929 17.000 0.051 1.000 Y NA
 365941 365942 S3794 S3795 yihS yihR TRUE 0.656 138.000 0.026 1.000 Y NA
 365942 365943 S3795 S3796 yihR yihQ TRUE 0.672 199.000 0.000 0.003 Y NA
 365943 2179361 S3796 S3797 yihQ yihP TRUE 0.502 25.000 0.000 NA   NA
 2179361 365944 S3797 S3798 yihP yihO FALSE 0.333 43.000 0.000 NA   NA
 365944 2179362 S3798 S3799 yihO yshA FALSE 0.207 68.000 0.000 NA   NA
 365945 365946 S3800 S3801     TRUE 0.996 -81.000 0.000 0.083 Y NA
 365946 365947 S3801 S3802   yihN FALSE 0.355 29.000 0.000 NA N NA
 365947 365948 S3802 S3803 yihN yihM TRUE 0.845 102.000 0.833 NA   NA
 365948 365949 S3803 S3804 yihM yihL TRUE 0.990 8.000 0.800 NA   NA
 365949 365950 S3804 S3805 yihL yihK FALSE 0.196 217.000 0.000 0.033 N NA
 365951 365952 S3806 S3807 glnA glnL FALSE 0.128 173.000 0.053 1.000 N NA
 365952 365953 S3807 S3808 glnL glnG TRUE 0.997 12.000 0.587 0.052 Y NA
 365954 365955 S3809 S3810 hemN yihI FALSE 0.186 189.000 0.107 NA   NA
 2179363 365957 S3812 S3813 spf polA FALSE 0.202 148.000 0.000 NA   NA
 365959 365960 S3815 S3816 yihF dsbA FALSE 0.219 113.000 0.000 NA   NA
 365960 365961 S3816 S3817 dsbA yihE TRUE 0.748 17.000 0.111 NA   NA
 365961 365962 S3817 S3818 yihE yihD FALSE 0.307 77.000 0.106 NA   NA
 365963 365964 S3819 S3820 mobA mobB TRUE 0.996 -18.000 0.064 0.003 Y NA
 406633 2179364 S3821 S3822 rrfA rrlA FALSE 0.201 95.000 0.000 NA   NA
 2179364 400163 S3822 S3823 rrlA alaT FALSE 0.122 184.000 0.000 NA   NA
 400163 400162 S3823 S3824 alaT ileT FALSE 0.333 43.000 0.000 NA   NA
 400162 408054 S3824 S3825 ileT rrsA FALSE 0.205 69.000 0.000 NA   NA
 408054 365965 S3825 S3826 rrsA hemG FALSE 0.015 378.000 0.000 NA   NA
 365965 365966 S3826 S3827 hemG trkH TRUE 0.964 12.000 0.455 1.000 N NA
 365966 365967 S3827 S3828 trkH yigZ TRUE 0.690 39.000 0.202 1.000   NA
 365967 365968 S3828 S3829 yigZ pepQ TRUE 0.947 0.000 0.127 1.000   NA
 365969 365970 S3830 S3831 fadB fadA TRUE 0.996 10.000 0.607 1.000 Y NA
 365971 365972 S3832 S3833 ubiB yigC TRUE 0.804 46.000 0.090 NA Y NA
 365974 365975 S3836 S3837 yigW yigU TRUE 0.435 42.000 0.121 NA N NA
 365975 365976 S3837 S3838 yigU   TRUE 0.994 3.000 0.333 NA Y NA
 365976 2179365 S3838 S3839     TRUE 0.938 -51.000 0.000 NA   NA
 2179365 365977 S3839 S3840     TRUE 0.951 -136.000 0.000 NA   NA
 365977 365978 S3840 S3841   yigR FALSE 0.370 37.000 0.032 1.000   NA
 365978 365979 S3841 S3842 yigR yigP TRUE 0.989 -3.000 0.432 1.000   NA
 365979 365980 S3842 S3843 yigP ubiE TRUE 0.850 14.000 0.145 1.000   NA
 365980 365981 S3843 S3844 ubiE yigN FALSE 0.199 95.000 0.047 NA   NA
 365981 365982 S3844 S3845 yigN udp FALSE 0.166 156.000 0.041 NA   NA
 365983 365984 S3847 S3848   metE FALSE 0.010 437.000 0.000 NA   NA
 365986 365987 S3850 S3851 yigM yigL FALSE 0.265 76.000 0.067 1.000   NA
 365987 365988 S3851 S3852 yigL pldB TRUE 0.985 8.000 0.524 1.000   NA
 365990 365991 S3854 S3855 yigJ recQ FALSE 0.028 316.000 0.043 1.000   NA
 365991 365992 S3855 S3856 recQ pldA FALSE 0.204 127.000 0.057 1.000 N NA
 365993 365994 S3857 S3858 yigI rarD FALSE 0.392 52.000 0.099 NA   NA
 365994 365995 S3858 S3859 rarD yigG FALSE 0.148 59.000 0.006 NA   NA
 365995 365996 S3859 S3860 yigG yigF TRUE 0.885 14.000 0.200 NA   NA
 366001 366002 S3865 S3866 uvrD yigB FALSE 0.369 84.000 0.128 1.000   NA
 366002 366003 S3866 S3867 yigB xerC TRUE 0.984 0.000 0.367 1.000   NA
 366003 366004 S3867 S3868 xerC yigA TRUE 0.993 -3.000 0.714 NA   NA
 366004 366005 S3868 S3869 yigA dapF TRUE 0.962 -3.000 0.175 NA   NA
 366005 366006 S3869 S3870 dapF yifL FALSE 0.188 37.000 0.021 NA N NA
 366007 10942479 S3871 S3872     TRUE 0.542 22.000 0.000 NA   NA
 366008 366009 S3874 S3875     TRUE 0.996 -81.000 0.000 0.083 Y NA
 366009 2179367 S3875 S3877     FALSE 0.017 364.000 0.000 NA   NA
 366012 366013 S3879 S3880 hemC hemD TRUE 0.997 -3.000 0.205 0.001 Y NA
 366013 366014 S3880 S3881 hemD hemX TRUE 0.984 22.000 0.600 1.000 Y NA
 366014 366015 S3881 S3882 hemX hemY TRUE 0.988 3.000 0.144 1.000 Y NA
 366015 366016 S3882 S3883 hemY   FALSE 0.003 862.000 0.000 1.000 N NA
 366016 366017 S3883 S3884     TRUE 0.991 -42.000 0.000 1.000 Y NA
 366018 400161 S3885 S3886 aslB proM FALSE 0.204 147.000 0.000 NA   NA
 400161 400160 S3886 S3887 proM leuT FALSE 0.333 43.000 0.000 NA   NA
 400160 400159 S3887 S3888 leuT hisR TRUE 0.557 21.000 0.000 NA   NA
 400159 400158 S3888 S3889 hisR argX FALSE 0.235 59.000 0.000 NA   NA
 400158 366019 S3889 S3890 argX yifK FALSE 0.211 103.000 0.000 NA   NA
 366019 366020 S3890 S3891 yifK wecG FALSE 0.092 191.000 0.000 1.000 N NA
 366020 366021 S3891 S3892 wecG wecF TRUE 0.938 3.000 0.126 1.000   NA
 366021 366022 S3892 S3893 wecF yifM TRUE 0.994 -3.000 0.684 1.000   NA
 366022 366023 S3893 S3894 yifM wzxE TRUE 0.992 -3.000 0.605 1.000   NA
 366023 366024 S3894 S3895 wzxE wecE TRUE 0.968 2.000 0.218 1.000   NA
 366024 366025 S3895 S3896 wecE wecD TRUE 0.967 5.000 0.248 1.000   NA
 366025 366026 S3896 S3897 wecD rffH TRUE 0.416 107.000 0.145 1.000   NA
 366026 366027 S3897 S3898 rffH rffG TRUE 0.995 19.000 0.739 0.002 Y NA
 366027 366028 S3898 S3899 rffG wecC TRUE 0.994 0.000 0.273 1.000 Y NA
 366028 366029 S3899 S3900 wecC wecB TRUE 0.996 -3.000 0.348 1.000 Y NA
 366029 366030 S3900 S3901 wecB wzzE TRUE 0.997 14.000 0.677 0.003 Y NA
 366030 366031 S3901 S3902 wzzE rfe TRUE 0.998 12.000 0.735 0.003 Y NA
 366031 366032 S3902 S3903 rfe rho FALSE 0.044 240.000 0.000 1.000 N NA
 366032 366033 S3903 S3904 rho rhoL FALSE 0.120 85.000 0.002 NA   NA
 366033 366034 S3904 S3905 rhoL trxA FALSE 0.132 141.000 0.004 NA   NA
 366035 366036 S3906 S3907 rhlB gppA TRUE 0.678 134.000 0.406 1.000 N NA
 366041 366042 S3912 S3913 ilvA ilvD TRUE 0.986 3.000 0.106 1.000 Y NA
 366042 366043 S3913 S3914 ilvD ilvE TRUE 0.709 65.000 0.075 1.000 Y NA
 366043 366044 S3914 S3915 ilvE ilvM TRUE 0.840 20.000 0.205 1.000   NA
 366044 366045 S3915 S3917 ilvM ilvG TRUE 0.998 0.000 0.943 0.001   NA
 366045 366046 S3917 S3918 ilvG ilvL TRUE 0.630 139.000 0.091 0.002   NA
 366048 2179369 S3921 S3922 yifA pssR TRUE 0.951 -239.000 0.000 NA   NA
 400157 400156 S3923 S3924 trpT aspT TRUE 0.839 9.000 0.000 NA   NA
 400156 406634 S3924 S3925 aspT rrfC FALSE 0.270 53.000 0.000 NA   NA
 406634 2179370 S3925 S3926 rrfC rrlC FALSE 0.201 95.000 0.000 NA   NA
 2179370 400155 S3926 S3927 rrlC gltU FALSE 0.107 194.000 0.000 NA   NA
 400155 408055 S3927 S3928 gltU rrsC FALSE 0.201 86.000 0.000 NA   NA
 366049 366050 S3929 S3930 yieP yieO TRUE 0.458 47.000 0.100 1.000   NA
 366051 366052 S3931 S3932 rbsR rbsK TRUE 0.961 13.000 0.500 1.000 N NA
 366052 2179371 S3932 S3933 rbsK rbsB FALSE 0.219 111.000 0.000 NA   NA
 2179371 366053 S3933 S3934 rbsB rbsC TRUE 0.502 25.000 0.000 NA   NA
 366053 366054 S3934 S3936 rbsC   FALSE 0.003 1182.000 0.000 1.000 N NA
 366054 366055 S3936 S3937     TRUE 0.996 -81.000 0.000 0.083 Y NA
 366055 2179372 S3937 S3938   rbsA FALSE 0.287 51.000 0.000 NA   NA
 2179372 366056 S3938 S3939 rbsA rbsD TRUE 0.843 8.000 0.000 NA   NA
 366056 366057 S3939 S3940 rbsD kup FALSE 0.132 167.000 0.000 1.000 N NA
 366057 366058 S3940 S3941 kup   FALSE 0.146 158.000 0.000 1.000 N NA
 366059 366060 S3942 S3943 yieN yieM TRUE 0.990 -6.000 0.443 NA   NA
 366062 366063 S3945 S3946 asnC mioC FALSE 0.366 90.000 0.165 1.000 N NA
 366063 366064 S3946 S3947 mioC gidA FALSE 0.012 379.000 0.000 1.000 N NA
 366064 366065 S3947 S3948 gidA gidB TRUE 0.711 64.000 0.466 1.000 N NA
 366065 366066 S3948 S3949 gidB atpI FALSE 0.002 617.000 0.005 1.000 N NA
 366066 366067 S3949 S3950 atpI atpB TRUE 0.996 9.000 0.291 0.003 Y NA
 366067 366068 S3950 S3951 atpB atpE TRUE 0.979 47.000 0.557 0.003 Y NA
 366068 366069 S3951 S3952 atpE atpF TRUE 0.975 62.000 0.666 0.002 Y NA
 366069 366070 S3952 S3953 atpF atpH TRUE 0.990 15.000 0.242 0.002 Y NA
 366070 366071 S3953 S3954 atpH atpA TRUE 0.998 13.000 0.864 0.002 Y NA
 366071 366072 S3954 S3955 atpA atpG TRUE 0.986 51.000 0.846 0.002 Y NA
 366072 366073 S3955 S3956 atpG atpD TRUE 0.993 27.000 0.724 0.002 Y NA
 366073 366074 S3956 S3957 atpD atpC TRUE 0.994 27.000 0.837 0.002 Y NA
 366074 366075 S3957 S3958 atpC glmU FALSE 0.020 351.000 0.067 1.000 N NA
 366075 366076 S3958 S3959 glmU glmS TRUE 0.625 162.000 0.055 1.000 Y NA
 366076 366077 S3959 S3960 glmS   FALSE 0.181 121.000 0.000 1.000 N NA
 366077 366078 S3960 S3961   lpfA FALSE 0.026 292.000 0.000 1.000 N NA
 366079 366080 S3963 S3964     TRUE 0.991 -42.000 0.000 1.000 Y NA
 366082 366083 S3966 S3967     TRUE 0.806 141.000 0.182 1.000 Y NA
 366085 366086 S3969 S3970 nepI yicN FALSE 0.291 211.000 0.250 NA   NA
 366086 366087 S3970 S3971 yicN yicO TRUE 0.488 26.000 0.000 NA   NA
 366089 366090 S3973 S3974 uhpT uhpC TRUE 0.817 138.000 0.000 0.040 Y NA
 366090 366091 S3974 S3975 uhpC uhpB TRUE 0.927 10.000 0.000 0.062 N NA
 366091 366092 S3975 S3976 uhpB uhpA TRUE 0.993 0.000 0.000 0.009 Y NA
 366092 366093 S3976 S3977 uhpA ilvN FALSE 0.350 75.000 0.118 1.000   NA
 366093 366094 S3977 S3978 ilvN ilvB TRUE 0.996 4.000 0.649 0.001   NA
 366094 366095 S3978 S3979 ilvB ivbL TRUE 0.512 106.000 0.216 NA   NA
 366097 366098 S3981 S3982 yidF yidG TRUE 0.988 -3.000 0.429 NA   NA
 366098 366099 S3982 S3983 yidG yidH TRUE 0.994 -10.000 0.571 NA   NA
 2179373 366101 S3985 S3986 yidJ yidK TRUE 0.796 11.000 0.000 NA   NA
 2179374 366103 S3988 S3989 glvG glvB TRUE 0.886 0.000 0.000 NA   NA
 366103 2179375 S3989 S3990 glvB glvC TRUE 0.502 25.000 0.000 NA   NA
 366105 366106 S3992 S3993 yidE ibpB FALSE 0.102 196.000 0.000 NA   NA
 366106 366107 S3993 S3994 ibpB ibpA TRUE 0.725 112.000 0.099 NA Y NA
 366111 2179376 S3998 S3999 dgoT dgoA FALSE 0.202 75.000 0.000 NA   NA
 2179376 366112 S3999 S4000 dgoA dgoK TRUE 0.928 -16.000 0.000 NA   NA
 366112 366113 S4000 S4002 dgoK yidW TRUE 0.993 -3.000 0.733 1.000 N NA
 366115 366116 S4004 S4005 yidA yidB FALSE 0.218 114.000 0.000 NA   NA
 366116 366117 S4005 S4006 yidB gyrB FALSE 0.054 240.000 0.000 NA   NA
 366117 366118 S4006 S4007 gyrB recF TRUE 0.975 29.000 0.249 0.003 Y NA
 366118 366119 S4007 S4008 recF dnaN TRUE 0.995 0.000 0.318 1.000 Y NA
 366119 366120 S4008 S4009 dnaN dnaA TRUE 0.994 5.000 0.328 1.000 Y NA
 366121 366122 S4010 S4011 rpmH rnpA TRUE 0.970 17.000 0.787 1.000   NA
 366122 366123 S4011 S4012 rnpA yidC FALSE 0.098 224.000 0.105 1.000 N NA
 366123 366124 S4012 S4013 yidC thdF TRUE 0.543 106.000 0.221 1.000   NA
 366125 366126 S4014 S4015     TRUE 0.996 -81.000 0.000 0.082 Y NA
 366127 366128 S4016 S4017 tnaL tnaA FALSE 0.105 221.000 0.077 1.000   NA
 366128 366129 S4017 S4018 tnaA tnaB TRUE 0.763 91.000 0.154 1.000 Y NA
 366129 366130 S4018 S4019 tnaB yidY FALSE 0.183 132.000 0.000 1.000 N NA
 366130 2179378 S4019 S4020 yidY yidZ TRUE 0.931 -25.000 0.000 NA   NA
 366131 366132 S4021 S4022     TRUE 0.806 141.000 0.182 1.000 Y NA
 366133 366134 S4024 S4025 yieE yieF TRUE 0.611 22.000 0.074 NA   NA
 366136 366137 S4027 S4028 yieH yieI FALSE 0.209 67.000 0.000 NA   NA
 366137 366138 S4028 S4029 yieI   FALSE 0.154 168.000 0.000 NA   NA
 366138 366139 S4029 S4030     TRUE 0.899 -3.000 0.000 NA   NA
 366139 366140 S4030 S4031     TRUE 0.899 -3.000 0.000 NA   NA
 366140 2179379 S4031 S4032   yieJ FALSE 0.407 34.000 0.000 NA   NA
 366141 366142 S4033 S4034 yieK yieL TRUE 0.892 2.000 0.080 1.000 N NA
 366142 366143 S4034 S4035 yieL yieC TRUE 0.802 27.000 0.267 1.000 N NA
 366143 366144 S4035 S4036 yieC   FALSE 0.006 515.000 0.000 1.000 N NA
 366144 366145 S4036 S4037     TRUE 0.996 -81.000 0.000 0.082 Y NA
 366145 366146 S4037 S4038   bglB FALSE 0.357 34.000 0.000 1.000 N NA
 366146 366147 S4038 S4039 bglB bglF TRUE 0.986 19.000 0.562 1.000 Y NA
 366147 366148 S4039 S4040 bglF bglG TRUE 0.644 134.000 0.312 1.000   NA
 366148 366149 S4040 S4041 bglG phoU FALSE 0.034 287.000 0.000 NA   NA
 366149 366150 S4041 S4042 phoU pstB TRUE 0.980 15.000 0.317 NA Y NA
 366150 366151 S4042 S4043 pstB pstA TRUE 0.965 92.000 0.526 0.001 Y NA
 366151 366152 S4043 S4044 pstA pstC TRUE 0.980 48.000 0.537 0.001 Y NA
 366152 366153 S4044 S4045 pstC pstS TRUE 0.890 87.000 0.145 0.001 Y NA
 366156 366157 S4049 S4050     TRUE 0.991 -42.000 0.000 1.000 Y NA
 366158 366159 S4052 S4053 iutA iucD TRUE 0.827 6.000 0.050 1.000 N NA
 366159 366160 S4053 S4054 iucD iucC TRUE 0.997 -3.000 0.417 1.000 Y NA
 366160 366161 S4054 S4055 iucC iucB TRUE 0.975 0.000 0.250 1.000   NA
 366161 366162 S4055 S4056 iucB iucA TRUE 0.991 1.000 0.609 1.000   NA
 366165 366166 S4058 S4059     TRUE 0.996 -81.000 0.000 0.082 Y NA
 366168 366169 S4060 S4061     TRUE 0.991 -42.000 0.000 1.000 Y NA
 366169 366170 S4061 S4062     FALSE 0.004 1003.000 0.000 1.000   NA
 366170 366171 S4062 S4063     FALSE 0.067 236.000 0.000 1.000   NA
 366173 366174 S4064 S4832     TRUE 0.899 -3.000 0.000 NA   NA
 366175 366176 S4833 S4834 shiB shiA FALSE 0.008 515.000 0.000 NA   NA
 366176 366177 S4834 S4835 shiA   FALSE 0.014 412.000 0.000 1.000   NA
 366177 400154 S4835 S4071   selC FALSE 0.038 276.000 0.000 NA   NA
 2179380 366178 S4072 S4073 yicJ yicI TRUE 0.827 10.000 0.000 NA   NA
 366179 366180 S4074 S4075 yicH yicE TRUE 0.562 121.000 0.257 NA   NA
 366182 366183 S4077 S4078 recG spoU TRUE 0.866 6.000 0.076 1.000 N NA
 366183 366184 S4078 S4079 spoU spoT TRUE 0.885 7.000 0.095 1.000 N NA
 366184 366185 S4079 S4080 spoT rpoZ TRUE 0.971 19.000 0.291 1.000 Y NA
 366185 366186 S4080 S4081 rpoZ gmk TRUE 0.758 55.000 0.471 1.000 N NA
 366188 366189 S4083 S4084 yicG dinD FALSE 0.057 237.000 0.000 NA   NA
 366189 366190 S4084 S4085 dinD yicC FALSE 0.070 221.000 0.000 NA   NA
 366191 366192 S4086 S4087 rph pyrE FALSE 0.122 66.000 0.022 1.000 N NA
 366193 366194 S4088 S4089 slmA dut FALSE 0.211 107.000 0.060 1.000 N NA
 366194 366195 S4089 S4090 dut dfp TRUE 0.977 -22.000 0.201 1.000 N NA
 366196 366197 S4091 S4092 radC rpmB FALSE 0.030 217.000 0.002 1.000 N NA
 366197 366198 S4092 S4093 rpmB rpmG TRUE 0.986 21.000 0.332 0.010 Y NA
 366198 366199 S4093 S4094 rpmG mutM FALSE 0.142 98.000 0.034 1.000 N NA
 366200 366201 S4095 S4096 kdtB kdtA TRUE 0.733 8.000 0.020 1.000 N NA
 366202 366203 S4097 S4098     TRUE 0.996 -81.000 0.000 0.082 Y NA
 366203 366204 S4098 S4099   waaQ FALSE 0.015 358.000 0.000 1.000 N NA
 366204 366205 S4099 S4100 waaQ waaG TRUE 0.988 -3.000 0.079 1.000 Y NA
 366205 366206 S4100 S4101 waaG waaP TRUE 0.938 -16.000 0.000 1.000   NA
 366206 366207 S4101 S4102 waaP waaL FALSE 0.370 43.000 0.000 1.000   NA
 366207 366208 S4102 S4103 waaL waaY TRUE 0.529 26.000 0.000 1.000   NA
 366208 366209 S4103 S4104 waaY waaJ TRUE 0.893 25.000 0.375 1.000   NA
 366209 366210 S4104 S4105 waaJ waaD TRUE 0.993 9.000 0.333 1.000 Y NA
 366211 366212 S4106 S4107 waaI rfaC TRUE 0.984 -3.000 0.036 NA Y NA
 366212 366213 S4107 S4108 rfaC rfaF TRUE 0.967 34.000 0.205 0.001 Y NA
 366213 366214 S4108 S4109 rfaF rfaD TRUE 0.984 10.000 0.146 1.000 Y NA
 366215 366216 S4110 S4111 kbl tdh TRUE 0.981 10.000 0.547 1.000 N NA
 366216 366217 S4111 S4112 tdh   FALSE 0.051 230.000 0.000 1.000 N NA
 366217 366218 S4112 S4113     TRUE 0.996 -81.000 0.000 0.082 Y NA
 366218 366219 S4113 S4114   yibD FALSE 0.202 82.000 0.000 NA   NA
 366220 366221 S4115 S4116 yibQ yibP FALSE 0.323 130.000 0.088 1.000   NA
 366221 366222 S4116 S4117 yibP yibO TRUE 0.922 10.000 0.170 1.000 N NA
 366223 366224 S4118 S4119 yibN grxC FALSE 0.149 142.000 0.048 NA N NA
 366224 366225 S4119 S4120 grxC secB FALSE 0.162 63.000 0.038 1.000 N NA
 366225 366226 S4120 S4121 secB gpsA TRUE 0.962 0.000 0.206 1.000 N NA
 366226 366227 S4121 S4122 gpsA cysE TRUE 0.674 80.000 0.429 1.000 N NA
 366228 366229 S4123 S4124 yibK lldD FALSE 0.055 196.000 0.020 1.000 N NA
 366229 366230 S4124 S4125 lldD lldR TRUE 0.980 -3.000 0.309 1.000 N NA
 366230 366231 S4125 S4126 lldR lldP TRUE 0.991 0.000 0.652 1.000 N NA
 366231 2179381 S4126 S4127 lldP   FALSE 0.017 368.000 0.000 NA   NA
 366232 366233 S4130 S4131     TRUE 0.996 -81.000 0.000 0.082 Y NA
 366234 366235 S4132 S4133 yibL mtlR FALSE 0.010 505.000 0.067 NA   NA
 366235 366236 S4133 S4134 mtlR mtlD TRUE 0.964 0.000 0.230 NA N NA
 366236 366237 S4134 S4135 mtlD mtlA TRUE 0.856 95.000 0.292 1.000 Y NA
 366238 366239 S4136 S4137 yibI yibH TRUE 0.988 3.000 0.556 NA   NA
 366239 366240 S4137 S4138 yibH yibF FALSE 0.233 71.000 0.081 1.000 N NA
 366240 366241 S4138 S4139 yibF selA FALSE 0.153 98.000 0.040 1.000 N NA
 366241 366242 S4139 S4140 selA selB TRUE 0.996 -3.000 0.569 0.000 N NA
 366242 366243 S4140 S4141 selB yiaY FALSE 0.056 190.000 0.015 1.000 N NA
 366243 366244 S4141 S4142 yiaY aldB TRUE 0.790 75.000 0.032 0.036 Y NA
 366245 366246 S4143 S4144     TRUE 0.996 -81.000 0.000 0.082 Y NA
 366246 366247 S4144 S4145     FALSE 0.357 34.000 0.000 1.000 N NA
 366247 2179382 S4145 S4146   yiaM TRUE 0.870 3.000 0.000 NA   NA
 2179382 366248 S4146 S4147 yiaM   TRUE 0.605 18.000 0.000 NA   NA
 366248 366249 S4147 S4148     TRUE 0.996 -81.000 0.000 0.082 Y NA
 366249 2179383 S4148 S4149   yiaL FALSE 0.287 51.000 0.000 NA   NA
 2179383 366250 S4149 S4150 yiaL yiaK TRUE 0.757 12.000 0.000 NA   NA
 366251 366252 S4151 S4152 yiaJ yiaI TRUE 0.663 102.000 0.400 1.000 N NA
 366253 366254 S4153 S4154 avtA malS FALSE 0.164 178.000 0.085 1.000 N NA
 2179384 366256 S4156 S4157 xylR xylH FALSE 0.202 78.000 0.000 NA   NA
 366256 366257 S4157 S4158 xylH xylG TRUE 0.998 -22.000 0.469 1.000 Y NA
 366257 366258 S4158 S4159 xylG xylF TRUE 0.912 78.000 0.518 NA Y NA
 2179385 366259 S4160 S4161 xylA xylB FALSE 0.203 72.000 0.000 NA   NA
 366259 366260 S4161 S4162 xylB yiaB FALSE 0.290 169.000 0.143 NA   NA
 366260 366261 S4162 S4163 yiaB yiaA FALSE 0.267 46.000 0.032 NA   NA
 366263 366264 S4165 S4166 glyQ glyS TRUE 0.999 10.000 0.651 0.000 Y NA
 366265 366266 S4167 S4168     TRUE 0.996 -81.000 0.000 0.082 Y NA
 366267 2179386 S4169 S4170   yhiV TRUE 0.502 25.000 0.000 NA   NA
 366268 366269 S4171 S4172 yhiW yhiX FALSE 0.234 368.000 0.000 0.006 Y NA
 366269 366270 S4172 S4173 yhiX gadA FALSE 0.013 370.000 0.000 1.000 N NA
 366270 366271 S4173 S4174 gadA yhjA FALSE 0.067 211.000 0.000 1.000 N NA
 366271 366272 S4174 S4175 yhjA   FALSE 0.199 59.000 0.000 1.000 N NA
 366272 366273 S4175 S4177     TRUE 0.996 -81.000 0.000 0.082 Y NA
 366275 366276 S4179 S4180 cspA yiaG FALSE 0.009 446.000 0.000 NA   NA
 366278 366279 S4182 S4183 yiaE yiaD FALSE 0.178 104.000 0.000 1.000 N NA
 366281 366282 S4185 S4186 yiaC tag TRUE 0.892 -3.000 0.028 1.000   NA
 366283 366284 S4187 S4188 yhjY yhjX FALSE 0.052 229.000 0.000 1.000 N NA
 366284 366285 S4188 S4189 yhjX yhjW FALSE 0.075 324.000 0.000 0.061   NA
 366285 400144 S4189 S4190 yhjW proK FALSE 0.198 92.000 0.000 NA   NA
 400144 366286 S4190 S4191 proK dppA FALSE 0.004 744.000 0.000 NA   NA
 366286 366287 S4191 S4192 dppA dppB FALSE 0.355 308.000 0.087 0.040 Y NA
 366287 366288 S4192 S4193 dppB dppC TRUE 0.998 10.000 0.779 0.040 Y NA
 366288 366289 S4193 S4194 dppC dppD TRUE 0.995 11.000 0.560 1.000 Y NA
 366289 366290 S4194 S4195 dppD dppF TRUE 0.999 -3.000 0.500 0.002 Y NA
 366291 366292 S4196 S4197 yhjV yhjU FALSE 0.004 1153.000 0.000 NA   NA
 366292 366293 S4197 S4198 yhjU yhjT TRUE 0.899 -3.000 0.000 NA   NA
 366293 366294 S4198 S4199 yhjT yhjS TRUE 0.899 -3.000 0.000 NA   NA
 366295 366296 S4200 S4201 yhjR yhjQ TRUE 0.968 12.000 0.464 NA   NA
 366296 2179387 S4201 S4202 yhjQ yhjOP TRUE 0.899 -3.000 0.000 NA   NA
 2179387 366297 S4202 S4203 yhjOP yhjN FALSE 0.352 41.000 0.000 NA   NA
 366297 366298 S4203 S4204 yhjN yhjM TRUE 0.868 7.000 0.000 1.000   NA
 366298 2179388 S4204 S4205 yhjM yhjL FALSE 0.235 59.000 0.000 NA   NA
 2179388 366299 S4205 S4206 yhjL yhjK FALSE 0.217 115.000 0.000 NA   NA
 366299 366300 S4206 S4207 yhjK dctA TRUE 0.498 190.000 0.229 0.070 N NA
 366300 366301 S4207 S4208 dctA yhjJ FALSE 0.115 221.000 0.088 1.000   NA
 366303 366304 S4210 S4211 yhjH yhjG FALSE 0.144 70.000 0.000 NA N NA
 366305 366306 S4212 S4213 yhjE yhjD FALSE 0.014 411.000 0.000 1.000   NA
 366306 366307 S4213 S4214 yhjD yhjC TRUE 0.441 49.000 0.098 1.000   NA
 366309 366310 S4216 S4217   treF FALSE 0.175 145.000 0.000 1.000 N NA
 366311 366312 S4218 S4219     TRUE 0.996 -81.000 0.000 0.081 Y NA
 2179389 366313 S4220 S4221 yhiU yhiE FALSE 0.021 339.000 0.000 NA   NA
 366313 366314 S4221 S4222 yhiE hdeD FALSE 0.004 799.000 0.000 NA   NA
 366315 366316 S4223 S4224 hdeA hdeB FALSE 0.211 104.000 0.000 NA   NA
 366316 2179390 S4224 S4225 hdeB yhiD FALSE 0.218 136.000 0.000 NA   NA
 366317 366318 S4226 S4227 yhiF slp FALSE 0.151 156.000 0.000 1.000 N NA
 366318 2179391 S4227 S4228 slp yhiS FALSE 0.004 844.000 0.000 NA   NA
 2179391 366319 S4228 S4229 yhiS   FALSE 0.006 581.000 0.000 NA   NA
 366319 366320 S4229 S4230     TRUE 0.477 31.000 0.000 1.000   NA
 366320 366321 S4230 S4231     TRUE 0.996 -81.000 0.000 0.081 Y NA
 366322 366323 S4232 S4233 arsR arsB FALSE 0.224 54.000 0.000 1.000 N NA
 366323 366324 S4233 S4234 arsB arsC TRUE 0.952 13.000 0.000 1.000 Y NA
 366324 366325 S4234 S4235 arsC   FALSE 0.151 156.000 0.000 1.000 N NA
 366325 366326 S4235 S4236     TRUE 0.996 -81.000 0.000 0.081 Y NA
 366327 366328 S4237 S4238 gor yhiR FALSE 0.326 72.000 0.100 1.000   NA
 366329 366330 S4239 S4240 prlC yhiQ TRUE 0.899 8.000 0.098 NA   NA
 2179392 366331 S4241 S4242 yhiP uspA FALSE 0.025 318.000 0.000 NA   NA
 366334 366335 S4245 S4246 yhiN   FALSE 0.009 529.000 0.000 1.000   NA
 366335 366336 S4246 S4247     TRUE 0.996 -81.000 0.000 0.081 Y NA
 366338 366339 S4249 S4250     FALSE 0.003 1403.000 0.000 NA   NA
 366339 366340 S4250 S4254     FALSE 0.362 44.000 0.000 1.000   NA
 366341 366342 S4252 S4253     TRUE 0.991 -42.000 0.000 1.000 Y NA
 366345 366346 S4837 S4838     TRUE 0.938 -46.000 0.000 NA   NA
 2179394 2179395 S4257 S4258 yhiL yhiK FALSE 0.313 46.000 0.000 NA   NA
 2179395 366347 S4258 S4259 yhiK yhiJ FALSE 0.043 262.000 0.000 NA   NA
 366347 366348 S4259 S4260 yhiJ yhiI FALSE 0.017 366.000 0.000 NA   NA
 366348 366349 S4260 S4261 yhiI yhiH TRUE 0.967 -3.000 0.049 0.070   NA
 366349 366350 S4261 S4262 yhiH yhhJ TRUE 0.995 0.000 0.500 0.004   NA
 366350 366351 S4262 S4263 yhhJ   FALSE 0.026 331.000 0.000 1.000   NA
 366352 366353 S4264 S4265 yhhG nikE TRUE 0.777 6.000 0.031 1.000 N NA
 366353 366354 S4265 S4266 nikE nikD TRUE 0.997 -3.000 0.290 0.062 Y NA
 366354 366355 S4266 S4267 nikD nikC TRUE 0.996 0.000 0.409 1.000 Y NA
 366355 366356 S4267 S4268 nikC nikB TRUE 0.999 -3.000 0.629 0.001 Y NA
 366356 366357 S4268 S4269 nikB nikA TRUE 0.999 0.000 0.833 0.050 Y NA
 366357 366358 S4269 S4270 nikA yhhU FALSE 0.185 111.000 0.000 1.000 N NA
 366358 366359 S4270 S4271 yhhU yhhT TRUE 0.662 55.000 0.300 NA   NA
 366361 366362 S4273 S4274   yhhQ FALSE 0.237 73.000 0.066 NA   NA
 366364 366365 S4276 S4277 zntA yhhN TRUE 0.771 74.000 0.325 0.061   NA
 366367 366368 S4279 S4280 yhhL yhhF TRUE 0.935 -10.000 0.063 NA   NA
 366369 366370 S4281 S4282 ftsY ftsE TRUE 0.965 3.000 0.117 0.062 N NA
 366370 366371 S4282 S4283 ftsE ftsX TRUE 0.992 -7.000 0.121 1.000 Y NA
 366371 366372 S4283 S4284 ftsX rpoH FALSE 0.044 245.000 0.051 1.000 N NA
 366372 366373 S4284 S4285 rpoH livJ FALSE 0.064 214.000 0.000 1.000 N NA
 366375 366376 S4287 S4288 livK livH TRUE 0.886 48.000 0.217 1.000 Y NA
 366376 366377 S4288 S4289 livH livM TRUE 0.999 -3.000 0.574 0.039 Y NA
 366377 366378 S4289 S4290 livM livG TRUE 0.998 -3.000 0.574 1.000 Y NA
 366378 366379 S4290 S4291 livG livF TRUE 0.999 2.000 0.967 0.012 Y NA
 366379 366380 S4291 S4292 livF ugpB FALSE 0.011 397.000 0.000 1.000 N NA
 366380 366381 S4292 S4293 ugpB ugpA TRUE 0.972 98.000 0.793 0.039 Y NA
 366381 366382 S4293 S4294 ugpA ugpE TRUE 0.998 -3.000 0.306 0.039 Y NA
 366382 2179396 S4294 S4295 ugpE ugpC TRUE 0.933 -37.000 0.000 NA   NA
 2179396 366383 S4295 S4296 ugpC ugpQ TRUE 0.899 -3.000 0.000 NA   NA
 366387 366388 S4300 S4301 yhhX yhhW TRUE 0.688 123.000 0.400 NA   NA
 366388 366389 S4301 S4302 yhhW gntR FALSE 0.036 281.000 0.000 NA   NA
 366389 366390 S4302 S4303 gntR gntK FALSE 0.184 139.000 0.000 1.000 N NA
 366390 366391 S4303 S4304 gntK gntU TRUE 0.673 67.000 0.000 1.000 Y NA
 366393 366394 S4307 S4308 asd glgB FALSE 0.032 273.000 0.000 1.000 N NA
 366394 366395 S4308 S4309 glgB glgX TRUE 0.994 -3.000 0.020 0.002 Y NA
 366395 366396 S4309 S4310 glgX glgC TRUE 0.967 18.000 0.228 1.000 Y NA
 366396 366397 S4310 S4311 glgC glgA TRUE 0.995 0.000 0.307 1.000 Y NA
 366397 366398 S4311 S4312 glgA glgP TRUE 0.964 19.000 0.228 1.000 Y NA
 366398 366399 S4312 S4313 glgP   FALSE 0.181 118.000 0.000 1.000 N NA
 366399 366400 S4313 S4314     TRUE 0.951 6.000 0.000 0.057   NA
 366400 2179397 S4314 S4315   yzgL FALSE 0.218 108.000 0.000 NA   NA
 366402 366403 S4317 S4318 glpE glpG TRUE 0.782 51.000 0.405 1.000   NA
 366403 366404 S4318 S4319 glpG glpR TRUE 0.859 17.000 0.190 1.000   NA
 366406 2179398 S4321 S4322 rtcB rtcA TRUE 0.879 1.000 0.000 NA   NA
 2179398 366407 S4322 S4323 rtcA yhgJ TRUE 0.587 19.000 0.000 NA   NA
 366408 366409 S4325 S4326 malP malQ TRUE 0.992 10.000 0.137 0.013 Y NA
 366410 366411 S4327 S4328 gntT yhgI FALSE 0.021 361.000 0.000 1.000   NA
 366411 366412 S4328 S4330 yhgI yhgH FALSE 0.304 59.000 0.066 1.000   NA
 366414 366415 S4331 S4332     TRUE 0.991 -42.000 0.000 1.000 Y NA
 366415 366416 S4332 S4333   yhgA FALSE 0.202 76.000 0.000 NA   NA
 366416 366417 S4333 S4334 yhgA yhgG FALSE 0.092 203.000 0.000 NA   NA
 366417 366418 S4334 S4335 yhgG feoB TRUE 0.987 0.000 0.455 NA   NA
 366418 366419 S4335 S4336 feoB feoA TRUE 0.960 17.000 0.177 1.000 Y NA
 366419 366420 S4336 S4337 feoA yhgF FALSE 0.008 438.000 0.000 1.000 N NA
 366420 366421 S4337 S4338 yhgF greB TRUE 0.563 196.000 0.123 1.000 Y NA
 366422 366423 S4339 S4340 ompR envZ TRUE 0.998 -3.000 0.584 1.000 Y NA
 366426 366427 S4343 S4344 yrfI yrfH TRUE 0.661 25.000 0.140 1.000 N NA
 366427 366428 S4344 S4345 yrfH yrfG TRUE 0.837 11.000 0.056 1.000   NA
 366428 366429 S4345 S4346 yrfG yrfF TRUE 0.747 20.000 0.122 1.000   NA
 366432 366433 S4349 S4350 yrfD yrfC TRUE 0.994 0.000 0.870 NA   NA
 366433 366434 S4350 S4351 yrfC yrfB TRUE 0.989 -16.000 0.348 NA   NA
 366434 2179400 S4351 S4352 yrfB yrfA FALSE 0.202 76.000 0.000 NA   NA
 2179400 366435 S4352 S4353 yrfA hofQ TRUE 0.950 -85.000 0.000 NA   NA
 366435 366436 S4353 S4354 hofQ aroK FALSE 0.068 401.000 0.319 1.000 N NA
 366436 366437 S4354 S4355 aroK aroB TRUE 0.850 57.000 0.208 1.000 Y NA
 366437 366438 S4355 S4356 aroB damX FALSE 0.146 92.000 0.022 NA   NA
 366438 366439 S4356 S4357 damX dam TRUE 0.542 107.000 0.234 NA   NA
 366439 366440 S4357 S4358 dam rpe TRUE 0.518 18.000 0.040 1.000 N NA
 366440 366441 S4358 S4359 rpe gph TRUE 0.961 -7.000 0.120 1.000   NA
 366441 366442 S4359 S4360 gph trpS TRUE 0.960 -7.000 0.118 1.000   NA
 366442 366443 S4360 S4361 trpS yhfZ FALSE 0.005 489.000 0.004 NA   NA
 366443 366444 S4361 S4362 yhfZ yhfY TRUE 0.994 -25.000 0.562 NA   NA
 366444 366445 S4362 S4363 yhfY yhfX TRUE 0.519 84.000 0.233 NA   NA
 366445 366446 S4363 S4364 yhfX yhfW TRUE 0.989 1.000 0.625 NA N NA
 366446 366447 S4364 S4365 yhfW yhfV TRUE 0.941 -3.000 0.094 1.000   NA
 366447 366448 S4365 S4366 yhfV yhfU TRUE 0.989 -28.000 0.312 1.000   NA
 366448 366449 S4366 S4367 yhfU yhfT TRUE 0.985 12.000 0.828 1.000   NA
 366449 366450 S4367 S4368 yhfT yhfS TRUE 0.917 12.000 0.185 1.000   NA
 366451 366452 S4369 S4370 yhfR yhfQ TRUE 0.735 34.000 0.267 NA N NA
 366452 366453 S4370 S4371 yhfQ yhfP TRUE 0.993 -3.000 0.200 NA Y NA
 366453 2179401 S4371 S4372 yhfP yhfO TRUE 0.952 -344.000 0.000 NA   NA
 2179401 366454 S4372 S4373 yhfO frlB TRUE 0.933 -37.000 0.000 NA   NA
 366454 2179402 S4373 S4374 frlB yhfM TRUE 0.886 0.000 0.000 NA   NA
 2179402 366455 S4374 S4375 yhfM yhfL FALSE 0.052 244.000 0.000 NA   NA
 366455 366456 S4375 S4376 yhfL cysG FALSE 0.050 247.000 0.000 NA   NA
 366456 366457 S4376 S4377 cysG nirC TRUE 0.535 19.000 0.000 1.000 N NA
 366457 366458 S4377 S4378 nirC nirD FALSE 0.261 378.000 0.283 1.000 Y NA
 366458 366459 S4378 S4379 nirD nirB TRUE 0.998 -3.000 0.829 0.000 N NA
 366459 366460 S4379 S4380 nirB yhfC FALSE 0.035 262.000 0.000 1.000 N NA
 366461 366462 S4381 S4382 ppiA yhfG TRUE 0.666 105.000 0.364 NA   NA
 366462 366463 S4382 S4383 yhfG fic TRUE 0.923 -10.000 0.000 NA   NA
 366463 366464 S4383 S4384 fic pabA FALSE 0.238 32.000 0.008 1.000 N NA
 366464 366465 S4384 S4385 pabA argD TRUE 0.708 86.000 0.088 1.000 Y NA
 366466 366467 S4386 S4387 yhfK crp TRUE 0.450 51.000 0.111 1.000   NA
 366469 366470 S4389 S4390 prkB yheU TRUE 0.672 54.000 0.303 NA   NA
 366470 366471 S4390 S4391 yheU yheT TRUE 0.978 -6.000 0.222 NA   NA
 366471 366472 S4391 S4392 yheT yheS TRUE 0.831 0.000 0.016 NA   NA
 366473 366474 S4393 S4394 yheR kefB TRUE 0.861 76.000 0.927 1.000   NA
 366474 366475 S4394 S4395 kefB slyD FALSE 0.023 305.000 0.000 1.000 N NA
 366477 366478 S4397 S4398 fkpA yheO TRUE 0.528 167.000 0.310 NA   NA
 366478 366479 S4398 S4399 yheO yheN TRUE 0.968 0.000 0.220 NA   NA
 366479 366480 S4399 S4400 yheN yheM TRUE 0.998 0.000 0.790 NA Y NA
 366480 366481 S4400 S4401 yheM yheL TRUE 0.997 8.000 0.804 NA Y NA
 366481 366482 S4401 S4402 yheL rpsL FALSE 0.176 126.000 0.058 NA N NA
 366482 366483 S4402 S4403 rpsL rpsG TRUE 0.970 97.000 0.620 0.002 Y NA
 366483 366484 S4403 S4404 rpsG fusA TRUE 0.734 245.000 0.579 1.000 Y NA
 366484 366485 S4404 S4405 fusA tufA TRUE 0.955 71.000 0.400 0.001 Y NA
 366485 366486 S4405 S4406 tufA yheA FALSE 0.039 183.000 0.007 NA N NA
 366486 366487 S4406 S4407 yheA bfr TRUE 0.625 73.000 0.033 NA Y NA
 366488 366489 S4409 S4410 rpsJ rplC TRUE 0.973 33.000 0.307 0.013 Y NA
 366489 366490 S4410 S4411 rplC rplD TRUE 0.997 11.000 0.486 0.010 Y NA
 366490 366491 S4411 S4412 rplD rplW TRUE 0.999 -3.000 0.513 0.010 Y NA
 366491 366492 S4412 S4413 rplW rplB TRUE 0.996 18.000 0.849 0.013 Y NA
 366492 366493 S4413 S4414 rplB rpsS TRUE 0.996 17.000 0.820 0.013 Y NA
 366493 366494 S4414 S4415 rpsS rplV TRUE 0.996 15.000 0.769 0.013 Y NA
 366494 366495 S4415 S4416 rplV rpsC TRUE 0.995 18.000 0.719 0.013 Y NA
 366495 366496 S4416 S4417 rpsC rplP TRUE 0.997 13.000 0.828 0.013 Y NA
 366496 366497 S4417 S4418 rplP rpmC TRUE 0.999 0.000 0.802 0.010 Y NA
 366497 366498 S4418 S4419 rpmC rpsQ TRUE 0.999 0.000 0.828 0.010 Y NA
 366498 366499 S4419 S4420 rpsQ rplN TRUE 0.965 165.000 0.791 0.013 Y NA
 366499 366500 S4420 S4421 rplN rplX TRUE 0.998 11.000 0.810 0.013 Y NA
 366500 366501 S4421 S4422 rplX rplE TRUE 0.996 15.000 0.758 0.010 Y NA
 366501 366502 S4422 S4423 rplE rpsN TRUE 0.994 15.000 0.496 0.010 Y NA
 366502 366503 S4423 S4424 rpsN rpsH TRUE 0.982 34.000 0.473 0.010 Y NA
 366503 366504 S4424 S4425 rpsH rplF TRUE 0.997 13.000 0.808 0.010 Y NA
 366504 366505 S4425 S4426 rplF rplR TRUE 0.999 10.000 0.815 0.010 Y NA
 366505 366506 S4426 S4427 rplR rpsE TRUE 0.997 15.000 0.814 0.013 Y NA
 366506 366507 S4427 S4428 rpsE rpmD TRUE 0.999 4.000 0.789 0.013 Y NA
 366507 366508 S4428 S4429 rpmD rplO TRUE 0.999 4.000 0.653 0.002 Y NA
 366508 366509 S4429 S4430 rplO prlA TRUE 0.988 8.000 0.730 1.000 N NA
 366509 366510 S4430 S4431 prlA rpmJ FALSE 0.330 32.000 0.036 1.000 N NA
 366510 366511 S4431 S4432 rpmJ rpsM TRUE 0.843 147.000 0.086 0.010 Y NA
 366511 366512 S4432 S4433 rpsM rpsK TRUE 0.996 17.000 0.810 0.010 Y NA
 366512 366513 S4433 S4434 rpsK rpsD TRUE 0.983 34.000 0.509 0.013 Y NA
 366513 366514 S4434 S4435 rpsD rpoA TRUE 0.913 26.000 0.549 1.000 N NA
 366514 366515 S4435 S4436 rpoA rplQ TRUE 0.916 41.000 0.873 1.000 N NA
 366515 366516 S4436 S4437 rplQ   FALSE 0.126 170.000 0.000 1.000 N NA
 366516 366517 S4437 S4438     TRUE 0.899 -3.000 0.000 NA   NA
 366517 366518 S4438 S4439     TRUE 0.899 -3.000 0.000 NA   NA
 366518 366519 S4439 S4440     FALSE 0.223 62.000 0.000 NA   NA
 366519 366520 S4440 S4441     FALSE 0.024 324.000 0.000 NA   NA
 366520 366521 S4441 S4442     TRUE 0.991 -42.000 0.000 1.000 Y NA
 366523 366524 S4444 S4445 yjiH yjiG TRUE 0.975 -3.000 0.019 0.001   NA
 366524 366525 S4445 S4446 yjiG iadA TRUE 0.700 13.000 0.028 1.000   NA
 366525 366526 S4446 S4447 iadA yjiE FALSE 0.155 65.000 0.037 1.000 N NA
 366527 366528 S4448 S4449 yjiD   FALSE 0.037 277.000 0.000 NA   NA
 366528 366529 S4449 S4450     TRUE 0.996 -81.000 0.000 0.080 Y NA
 366530 366531 S4452 S4453 uxuR uxuB FALSE 0.063 215.000 0.000 1.000 N NA
 366531 366532 S4453 S4454 uxuB uxuA TRUE 0.690 81.000 0.070 1.000 Y NA
 366534 366535 S4456 S4457 fimH fimG TRUE 0.985 20.000 0.833 0.003   NA
 366535 366536 S4457 S4458 fimG fimF TRUE 0.980 13.000 0.000 0.003 Y NA
 366536 2179405 S4458 S4462 fimF fimD TRUE 0.827 10.000 0.000 NA   NA
 2179405 366537 S4462 S4460 fimD   TRUE 0.953 -1225.000 0.000 NA   NA
 366537 366538 S4460 S4461     TRUE 0.996 -81.000 0.000 0.080 Y NA
 366538 366539 S4461 S4463   fimC FALSE 0.004 718.000 0.000 1.000 N NA
 366539 366540 S4463 S4464 fimC fimI TRUE 0.978 37.000 0.800 1.000 Y NA
 366540 366541 S4464 S4465 fimI fimA TRUE 0.999 -34.000 0.600 0.003 Y NA
 366541 366542 S4465 S4466 fimA fimE FALSE 0.007 481.000 0.000 1.000 N NA
 366542 366543 S4466 S4467 fimE fimB FALSE 0.024 595.000 0.000 0.010   NA
 366544 366545 S4468 S4469 yjhA yjhT TRUE 0.951 -88.000 0.000 NA   NA
 366545 366546 S4469 S4470 yjhT yjhS FALSE 0.034 287.000 0.000 NA   NA
 366547 366548 S4471 S4472     TRUE 0.996 -81.000 0.000 0.080 Y NA
 366551 366552 S4475 S4476     TRUE 0.796 69.000 0.000 0.057 Y NA
 366552 366553 S4476 S4477     TRUE 0.806 141.000 0.182 1.000 Y NA
 366554 366555 S4479 S4480     TRUE 0.996 -81.000 0.000 0.080 Y NA
 366555 366556 S4480 S4481     TRUE 0.648 193.000 0.000 0.057 Y NA
 366556 366557 S4481 S4483     FALSE 0.307 240.000 0.000 1.000 Y NA
 366558 400153 S4839 S4485   leuX FALSE 0.098 199.000 0.000 NA   NA
 366559 366560 S4486 S4487 yjgB yjgR FALSE 0.165 129.000 0.007 1.000   NA
 366561 366562 S4488 S4489 yjgQ yjgP TRUE 0.996 0.000 0.631 0.060   NA
 366563 366564 S4490 S4491 pepA holC TRUE 0.723 134.000 0.494 1.000 N NA
 366564 366565 S4491 S4492 holC valS TRUE 0.910 0.000 0.089 1.000 N NA
 366568 366569 S4496 S4497 argI   FALSE 0.171 72.000 0.000 1.000 N NA
 366569 366570 S4497 S4498     TRUE 0.996 -81.000 0.000 0.080 Y NA
 2179408 366571 S4499 S4500 yjgL yjgK FALSE 0.200 87.000 0.000 NA   NA
 366571 366572 S4500 S4501 yjgK yjgJ FALSE 0.208 145.000 0.000 NA   NA
 366572 366573 S4501 S4502 yjgJ   FALSE 0.203 72.000 0.000 NA   NA
 366574 366575 S4503 S4504 yjgI yjgH FALSE 0.153 132.000 0.000 NA N NA
 366577 366578 S4505 S4507 pyrL pyrB TRUE 0.816 4.000 0.005 1.000   NA
 366578 366579 S4507 S4508 pyrB pyrI TRUE 0.991 13.000 0.197 0.000 Y NA
 366579 366580 S4508 S4509 pyrI yjgF TRUE 0.423 34.000 0.084 NA N NA
 366582 366583 S4511 S4512 treR treB FALSE 0.398 122.000 0.168 1.000 N NA
 366583 366584 S4512 S4513 treB treC TRUE 0.960 50.000 0.650 1.000 Y NA
 366584 366585 S4513 S4514 treC nrdD FALSE 0.011 394.000 0.000 1.000 N NA
 366585 366586 S4514 S4515 nrdD nrdG TRUE 0.652 158.000 0.464 1.000 N NA
 2179409 366587 S4516 S4517 cybC pmbA FALSE 0.040 267.000 0.000 NA   NA
 366591 2179410 S4521 S4522   yjfF FALSE 0.213 105.000 0.000 NA   NA
 2179410 366592 S4522 S4523 yjfF ytfT TRUE 0.796 11.000 0.000 NA   NA
 366592 366593 S4523 S4525 ytfT ytfR TRUE 0.994 11.000 0.506 1.000 Y NA
 366593 2179411 S4525 S4526 ytfR ytfQ FALSE 0.218 140.000 0.000 NA   NA
 366594 366595 S4527 S4528 ppa yjfA FALSE 0.016 376.000 0.000 NA   NA
 366596 366597 S4529 S4530 ytfP ytfN TRUE 0.947 3.000 0.167 NA   NA
 366597 366598 S4530 S4531 ytfN ytfM TRUE 0.991 -3.000 0.575 NA   NA
 366599 366600 S4532 S4533 msrA ytfL FALSE 0.022 323.000 0.042 NA   NA
 2179412 366603 S4536 S4537 ytfI cysQ FALSE 0.080 212.000 0.000 NA   NA
 366606 366607 S4539 S4541 ytfG ytfF TRUE 0.651 109.000 0.021 1.000 Y NA
 366607 366608 S4541 S4542 ytfF ytfE FALSE 0.341 108.000 0.150 NA N NA
 366609 2179413 S4543 S4544 cycA fklB FALSE 0.028 308.000 0.000 NA   NA
 366612 366613 S4547 S4548     TRUE 0.758 10.000 0.000 NA N NA
 366614 366615 S4549 S4550     TRUE 0.996 -81.000 0.000 0.080 Y NA
 366618 366619 S4553 S4554     TRUE 0.996 -81.000 0.000 0.080 Y NA
 400152 366620 S4555 S4556 pheU yjdC FALSE 0.216 107.000 0.000 NA   NA
 366620 366621 S4556 S4557 yjdC dsbD TRUE 0.722 37.000 0.217 1.000   NA
 366621 366622 S4557 S4558 dsbD cutA TRUE 0.947 -24.000 0.092 1.000 N NA
 366622 366623 S4558 S4559 cutA dcuA FALSE 0.163 116.000 0.005 1.000   NA
 366623 366624 S4559 S4560 dcuA aspA FALSE 0.176 118.000 0.015 1.000   NA
 366627 366628 S4563 S4564 mopB mopA TRUE 0.983 44.000 0.631 0.005 Y NA
 366628 366629 S4564 S4565 mopA yjeI FALSE 0.243 105.000 0.062 NA   NA
 366631 366632 S4567 S4568     TRUE 0.996 -81.000 0.000 0.080 Y NA
 366634 366635 S4570 S4571 efp sugE FALSE 0.007 460.000 0.000 1.000 N NA
 366636 366637 S4572 S4573 blc ampC FALSE 0.117 89.000 0.022 1.000 N NA
 366637 366638 S4573 S4574 ampC frdD FALSE 0.130 63.000 0.022 1.000 N NA
 366638 366639 S4574 S4575 frdD frdC TRUE 0.998 11.000 0.787 0.002 Y NA
 366639 366640 S4575 S4576 frdC frdB TRUE 0.997 11.000 0.454 0.002 Y NA
 366640 366641 S4576 S4577 frdB frdA TRUE 0.999 -7.000 0.470 0.002 Y NA
 366644 366645 S4581 S4582 yjeP psd TRUE 0.710 22.000 0.148 1.000 N NA
 366645 366646 S4582 S4583 psd yjeQ FALSE 0.316 97.000 0.095 1.000   NA
 366647 2179415 S4584 S4585 yjeR glyV FALSE 0.080 212.000 0.000 NA   NA
 2179415 2179416 S4585 S4586 glyV glyX FALSE 0.175 158.000 0.000 NA   NA
 2179416 2179417 S4586 S4587 glyX glyY FALSE 0.390 36.000 0.000 NA   NA
 2179417 2179418 S4587 S4588 glyY   FALSE 0.390 36.000 0.000 NA   NA
 366649 366650 S4589 S4591 yjeF yjeE TRUE 0.963 -28.000 0.118 NA   NA
 366650 366651 S4591 S4592 yjeE amiB TRUE 0.718 19.000 0.109 NA   NA
 366651 366652 S4592 S4593 amiB mutL TRUE 0.863 10.000 0.092 1.000 N NA
 366652 366653 S4593 S4594 mutL miaA TRUE 0.987 -7.000 0.188 0.061 N NA
 366653 366654 S4594 S4595 miaA hfq TRUE 0.758 86.000 0.531 1.000   NA
 366654 366655 S4595 S4596 hfq hflX FALSE 0.385 76.000 0.141 1.000   NA
 366655 366656 S4596 S4597 hflX hflK TRUE 0.654 86.000 0.184 0.060   NA
 366656 366657 S4597 S4598 hflK hflC TRUE 0.999 3.000 0.947 0.008 Y NA
 366657 366658 S4598 S4599 hflC yjeT TRUE 0.638 82.000 0.348 NA   NA
 366658 366659 S4599 S4600 yjeT purA FALSE 0.217 104.000 0.051 NA   NA
 366659 366660 S4600 S4601 purA yjeB FALSE 0.029 205.000 0.010 NA N NA
 366660 366661 S4601 S4602 yjeB vacB TRUE 0.795 39.000 0.038 NA Y NA
 366661 366662 S4602 S4603 vacB yjfH TRUE 0.461 180.000 0.147 0.013 N NA
 366662 366663 S4603 S4604 yjfH   FALSE 0.175 101.000 0.000 1.000 N NA
 366663 366664 S4604 S4605     TRUE 0.996 -81.000 0.000 0.080 Y NA
 366664 2179419 S4605 S4606   yjfL TRUE 0.925 -12.000 0.000 NA   NA
 2179419 366665 S4606 S4607 yjfL yjfM TRUE 0.827 10.000 0.000 NA   NA
 366665 366666 S4607 S4608 yjfM yjfC TRUE 0.871 3.000 0.049 NA   NA
 366666 2179420 S4608 S4609 yjfC aidB FALSE 0.204 70.000 0.000 NA   NA
 366667 366668 S4610 S4611     TRUE 0.996 -81.000 0.000 0.079 Y NA
 366668 366669 S4611 S4613   yjfN FALSE 0.007 523.000 0.000 NA   NA
 366669 366670 S4613 S4614 yjfN yjfO TRUE 0.783 122.000 0.588 NA   NA
 366672 366673 S4616 S4617 yjfQ yjfR FALSE 0.247 108.000 0.000 1.000   NA
 366674 366675 S4618 S4619 ulaA sgaB TRUE 0.886 16.000 0.059 0.011   NA
 366675 366676 S4619 S4620 sgaB ptxA TRUE 0.991 10.000 0.115 0.008 Y NA
 366676 366677 S4620 S4621 ptxA sgaH TRUE 0.983 14.000 0.328 1.000 Y NA
 366677 366678 S4621 S4622 sgaH sgaU TRUE 0.990 10.000 0.250 1.000 Y NA
 366678 366679 S4622 S4623 sgaU sgaE TRUE 0.992 0.000 0.200 1.000 Y NA
 366681 366682 S4625 S4626 rpsF priB TRUE 0.905 7.000 0.122 1.000 N NA
 366682 366683 S4626 S4627 priB rpsR TRUE 0.914 5.000 0.128 1.000 N NA
 366683 366684 S4627 S4628 rpsR rplI TRUE 0.978 42.000 0.499 0.010 Y NA
 366684 366685 S4628 S4629 rplI   FALSE 0.004 698.000 0.000 1.000 N NA
 366685 366686 S4629 S4630     TRUE 0.720 57.000 0.000 1.000 Y NA
 366687 366688 S4631 S4632     TRUE 0.806 141.000 0.182 1.000 Y NA
 2179421 366690 S4634 S4635 yjiW   FALSE 0.168 163.000 0.000 NA   NA
 366690 2179422 S4635 S4636   hsdM FALSE 0.147 172.000 0.000 NA   NA
 2179422 2179423 S4636 S4637 hsdM hsdR FALSE 0.004 763.000 0.000 NA   NA
 366691 366692 S4638 S4639     TRUE 0.996 -81.000 0.000 0.079 Y NA
 366693 366694 S4640 S4641 yjiA yjiX TRUE 0.512 113.000 0.212 NA   NA
 366694 366695 S4641 S4642 yjiX yjiY TRUE 0.828 50.000 0.531 NA   NA
 366695 366696 S4642 S4643 yjiY hpaC FALSE 0.018 378.000 0.000 1.000   NA
 366696 2179424 S4643 S4644 hpaC hpaB TRUE 0.605 18.000 0.000 NA   NA
 2179424 366697 S4644 S4646 hpaB   FALSE 0.048 253.000 0.000 NA   NA
 366697 366698 S4646 S4647   hpaA FALSE 0.200 171.000 0.067 1.000   NA
 366698 366699 S4647 S4648 hpaA hpaX TRUE 0.873 10.000 0.100 1.000 N NA
 366699 366700 S4648 S4649 hpaX hpaI TRUE 0.905 22.000 0.053 1.000 Y NA
 366700 366701 S4649 S4650 hpaI hpaH TRUE 0.970 11.000 0.439 1.000 N NA
 366701 366702 S4650 S4651 hpaH hpaF TRUE 0.550 68.000 0.282 1.000 N NA
 366702 366703 S4651 S4652 hpaF hpaD TRUE 0.971 10.000 0.330 1.000   NA
 366703 366704 S4652 S4653 hpaD hpaE TRUE 0.983 2.000 0.378 1.000   NA
 366704 366705 S4653 S4654 hpaE hpaG TRUE 0.995 -3.000 0.510 0.035 N NA
 366706 366707 S4655 S4656 hpcR tsr FALSE 0.273 119.000 0.095 1.000 N NA
 366708 366709 S4657 S4658 yjiZ yjjM FALSE 0.184 215.000 0.182 1.000 N NA
 366710 366711 S4660 S4661 mdoB yjjA FALSE 0.047 254.000 0.000 NA   NA
 366711 366712 S4661 S4662 yjjA dnaC TRUE 0.773 46.000 0.368 NA   NA
 366712 366713 S4662 S4663 dnaC dnaT TRUE 0.992 3.000 0.778 NA   NA
 366713 366714 S4663 S4664 dnaT yjjB FALSE 0.213 107.000 0.046 NA   NA
 366714 2179426 S4664 S4665 yjjB yjjP TRUE 0.922 -9.000 0.000 NA   NA
 366715 366716 S4666 S4667     TRUE 0.996 -81.000 0.000 0.079 Y NA
 366716 2179427 S4667 S4668   yjjQ TRUE 0.605 18.000 0.000 NA   NA
 2179427 366717 S4668 S4669 yjjQ bglJ TRUE 0.688 14.000 0.000 NA   NA
 366718 2179428 S4670 S4671 fhuF leuV FALSE 0.011 417.000 0.000 NA   NA
 2179428 2179429 S4671 S4672 leuV leuP FALSE 0.396 35.000 0.000 NA   NA
 2179429 2179430 S4672 S4673 leuP leuQ TRUE 0.456 29.000 0.000 NA   NA
 2179430 366719 S4673 S4674 leuQ yjjT FALSE 0.038 276.000 0.000 NA   NA
 366720 366721 S4675 S4676 holD rimI TRUE 0.968 -31.000 0.121 1.000   NA
 366721 366722 S4676 S4677 rimI yjjG TRUE 0.615 15.000 0.018 1.000   NA
 366722 366723 S4677 S4678 yjjG prfC FALSE 0.158 91.000 0.012 1.000   NA
 366723 366724 S4678 S4679 prfC osmY FALSE 0.014 393.000 0.000 NA   NA
 366724 366725 S4679 S4680 osmY yjjU FALSE 0.013 400.000 0.000 NA   NA
 366725 366726 S4680 S4681 yjjU yjjV FALSE 0.238 141.000 0.057 NA   NA
 366727 366728 S4682 S4683 yjjW yjjI TRUE 0.996 -28.000 0.810 NA   NA
 366729 366730 S4684 S4685 deoC deoA TRUE 0.863 127.000 0.286 1.000 Y NA
 366730 366731 S4685 S4686 deoA deoB TRUE 0.729 53.000 0.398 1.000 N NA
 366731 366732 S4686 S4687 deoB deoD TRUE 0.720 57.000 0.414 1.000 N NA
 366733 2179431 S4688 S4689   lplA TRUE 0.428 32.000 0.000 NA   NA
 2179431 366734 S4689 S4690 lplA smp TRUE 0.488 26.000 0.000 NA   NA
 366735 366736 S4691 S4692 serB sms FALSE 0.187 49.000 0.024 1.000 N NA
 366736 366737 S4692 S4693 sms nadR FALSE 0.391 21.000 0.021 1.000 N NA
 366739 366740 S4695 S4696 slt trpR FALSE 0.374 90.000 0.167 1.000 N NA
 366743 366744 S4700 S4701 creA creB TRUE 0.687 13.000 0.038 NA   NA
 366744 366745 S4701 S4702 creB creC TRUE 0.998 0.000 0.776 1.000 Y NA
 366745 366746 S4702 S4703 creC creD TRUE 0.615 58.000 0.311 NA N NA
 366748 366749 S4705 S4706 yjjY lasT FALSE 0.013 400.000 0.000 NA   NA
 366749 362682 S4706 S0001 lasT thrL FALSE 0.090 214.000 0.000 1.000   NA