MicrobesOnline Operon Predictions for Helicobacter pylori 26695

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 18425 18426 HP0001 HP0002   ribE TRUE 0.971 2.000 0.045 1.000 N 0.468
 18426 18427 HP0002 HP0003 ribE kdsA TRUE 0.956 10.000 0.027 1.000 N 0.439
 18427 18428 HP0003 HP0004 kdsA icfA TRUE 0.815 -13.000 0.025 1.000 N 0.226
 18429 18430 HP0005 HP0006 pyrF panC TRUE 0.986 1.000 0.012 1.000 N 0.889
 1937490 1937491 HPt01 HPt02 tRNA-Glu-1 tRNA-Asp-1 FALSE 0.008 66.000 0.000 NA   NA
 1937491 1937492 HPt02 HPt03 tRNA-Asp-1 tRNA-Val-1 FALSE 0.020 44.000 0.000 NA   NA
 1937492 1937493 HPt03 HPt04 tRNA-Val-1 tRNA-Glu-2 FALSE 0.019 45.000 0.000 NA   NA
 18433 18434 HP0009 HP0010 omp1 groEL FALSE 0.003 458.000 0.000 NA   0.167
 18434 18435 HP0010 HP0011 groEL groES TRUE 0.976 25.000 0.356 0.013 Y 0.501
 18436 18437 HP0012 HP0013 dnaG   TRUE 0.987 -3.000 0.035 1.000 N 0.737
 18437 18438 HP0013 HP0014     FALSE 0.103 89.000 0.012 NA   0.132
 18438 18439 HP0014 HP0015     FALSE 0.125 147.000 0.235 NA   0.337
 18439 18440 HP0015 HP0016     TRUE 0.995 0.000 1.000 NA   0.901
 18440 18441 HP0016 HP0017   virB4 TRUE 0.992 2.000 1.000 NA   0.807
 18441 18442 HP0017 HP0018 virB4   FALSE 0.004 252.000 0.000 NA   0.053
 18442 18443 HP0018 HP0019   cheV FALSE 0.150 108.000 0.071 NA   0.226
 18443 18444 HP0019 HP0020 cheV nspC TRUE 0.988 -3.000 0.042 1.000 N 0.799
 18445 18446 HP0021 HP0022     TRUE 0.966 11.000 0.000 1.000   0.662
 18447 18448 HP0023 HP0024     TRUE 0.958 11.000 0.000 NA   0.813
 18449 18450 HP0025 HP0026 omp2 gltA FALSE 0.006 619.000 0.000 NA   0.353
 18451 18452 HP0027 HP0028 icd   TRUE 0.634 67.000 0.021 NA   0.872
 18453 18454 HP0029 HP0030 bioD   TRUE 0.509 4.000 0.000 NA   -0.236
 18455 18456 HP0031 HP0032     TRUE 0.881 31.000 0.021 NA   0.798
 18456 18457 HP0032 HP0033   clpA TRUE 0.966 0.000 0.596 NA   0.106
 18457 18458 HP0033 HP0034 clpA panD TRUE 0.940 -10.000 0.014 1.000 N 0.562
 18458 18459 HP0034 HP0035 panD   TRUE 0.979 3.000 0.029 NA   0.795
 18459 18460 HP0035 HP0036     TRUE 0.975 0.000 0.017 NA   0.580
 18460 18461 HP0036 HP0037     TRUE 0.991 8.000 0.533 1.000   0.707
 18461 18462 HP0037 HP0038     TRUE 0.427 127.000 0.750 NA Y 0.706
 18462 18463 HP0038 HP0039m     TRUE 0.941 -3.000 1.000 NA Y NA
 18463 18464 HP0039m HP0041     TRUE 0.884 -7.000 0.500 NA   NA
 18464 18465 HP0041 HP0042     TRUE 0.527 63.000 0.000 NA   0.896
 18465 18466 HP0042 HP0043   algA FALSE 0.227 70.000 0.014 1.000 N 0.066
 18466 18467 HP0043 HP0044 algA rfbD TRUE 0.552 42.000 0.054 1.000 Y 0.034
 18467 18468 HP0044 HP0045 rfbD nolK TRUE 0.985 -7.000 0.381 0.007 Y 0.374
 18468 18469 HP0045 HP0046 nolK   FALSE 0.015 124.000 0.000 NA   -0.581
 18470 18471 HP0047 HP0048 hypE hypF TRUE 0.983 3.000 0.079 1.000 Y 0.659
 18471 18472 HP0048 HP0049 hypF   TRUE 0.636 -60.000 0.023 1.000 N 0.287
 18472 18473 HP0049 HP0050   dpnA TRUE 0.538 52.000 0.061 1.000 N 0.272
 18473 18474 HP0050 HP0051 dpnA   TRUE 0.985 -3.000 0.192 0.020 Y 0.195
 18474 18475 HP0051 HP0052     FALSE 0.069 175.000 0.364 NA   -0.202
 18475 18476 HP0052 HP0053     FALSE 0.061 195.000 0.000 NA   0.550
 18476 18477 HP0053 HP0054     TRUE 0.637 -3.000 0.000 NA   0.080
 18477 18478 HP0054 HP0055   putP TRUE 0.556 38.000 0.017 1.000 N 0.032
 18478 18479 HP0055 HP0056 putP   TRUE 0.944 27.000 0.141 1.000 N 0.680
 18480 10712216 HP0057 HP0058     FALSE 0.003 115.000 0.000 NA   NA
 10712216 18481 HP0058 HP0059     FALSE 0.180 2.000 0.000 NA   NA
 18481 18482 HP0059 HP0060     TRUE 0.459 17.000 0.000 NA   0.079
 18482 18483 HP0060 HP0061     TRUE 0.943 -3.000 0.286 NA   0.050
 18483 18484 HP0061 HP0062     TRUE 0.905 16.000 0.286 NA   0.098
 18484 18485 HP0062 HP0063     TRUE 0.955 11.000 0.000 NA   0.757
 18485 18486 HP0063 HP0064     TRUE 0.924 -30.000 0.182 NA   0.753
 18486 18487 HP0064 HP0065     TRUE 0.977 2.000 0.636 NA   0.454
 18487 18488 HP0065 HP0066     TRUE 0.756 -76.000 0.571 NA   0.375
 18489 18490 HP0067 HP0068 ureH ureG TRUE 0.998 0.000 0.337 0.008 Y 0.820
 18490 18491 HP0068 HP0069 ureG ureF TRUE 0.978 29.000 0.439 0.008 Y 0.629
 18491 18492 HP0069 HP0070 ureF ureE TRUE 0.970 23.000 0.460 0.008 Y 0.322
 18492 18493 HP0070 HP0071 ureE ureI TRUE 0.970 2.000 0.096 1.000   0.400
 18493 18494 HP0071 HP0072 ureI ureB FALSE 0.224 193.000 0.019 1.000   0.711
 18494 18495 HP0072 HP0073 ureB ureA TRUE 0.996 4.000 0.045 0.003 Y 0.955
 18495 1937495 HP0073 HPt06 ureA tRNA-Val-2 FALSE 0.001 253.000 0.000 NA   NA
 1937495 18496 HPt06 HP0074 tRNA-Val-2 lspA FALSE 0.083 21.000 0.000 NA   NA
 18496 18497 HP0074 HP0075 lspA ureC TRUE 0.964 -6.000 0.042 1.000 N 0.498
 18498 18499 HP0076 HP0077 rps20 prfA FALSE 0.084 124.000 0.029 1.000 Y -0.221
 18499 18500 HP0077 HP0078 prfA   FALSE 0.002 411.000 0.000 NA   -0.552
 18500 18501 HP0078 HP0079   omp3 TRUE 0.987 11.000 0.500 NA   0.735
 18501 18502 HP0079 HP0080 omp3   FALSE 0.022 246.000 0.000 NA   0.441
 18502 18503 HP0080 HP0081     FALSE 0.005 270.000 0.000 NA   0.175
 18504 18505 HP0082 HP0083 tlpC rps9 FALSE 0.232 156.000 0.008 1.000 N 0.774
 18505 18506 HP0083 HP0084 rps9 rpl13 TRUE 0.996 -3.000 0.231 0.038 Y 0.905
 18506 18507 HP0084 HP0085 rpl13   FALSE 0.002 313.000 0.000 NA   0.019
 18507 18508 HP0085 HP0086     TRUE 0.921 7.000 0.216 NA   0.096
 18508 18509 HP0086 HP0087     TRUE 0.513 54.000 0.096 NA   0.398
 18509 18510 HP0087 HP0088   rpoD TRUE 0.783 21.000 0.017 NA   0.290
 18510 18511 HP0088 HP0089 rpoD pfs FALSE 0.026 224.000 0.011 1.000 N 0.033
 18511 18512 HP0089 HP0090 pfs fabD TRUE 0.947 11.000 0.037 1.000 N 0.365
 1937496 18513 HPt07 HP0091 tRNA-Ser-3 hsdR FALSE 0.001 209.000 0.000 NA   NA
 18513 18514 HP0091 HP0092 hsdR hsdM TRUE 0.976 -6.000 0.347 0.082   -0.183
 18515 18516 HP0093 HP0094     TRUE 0.994 -3.000 0.273 0.002   0.317
 18516 18517 HP0094 HP0095     FALSE 0.168 99.000 0.182 NA   -0.068
 18519 18520 HP0097 HP0098   thrC FALSE 0.065 105.000 0.012 NA   -0.472
 18521 18522 HP0099 HP0100 tlpA   TRUE 0.983 0.000 0.024 NA   0.679
 18522 18523 HP0100 HP0101     FALSE 0.017 213.000 0.010 NA   0.108
 18524 18525 HP0102 HP0103   tlpB TRUE 0.903 31.000 0.700 NA N 0.539
 18525 18526 HP0103 HP0104 tlpB cpdB FALSE 0.014 206.000 0.000 1.000 N -0.118
 18526 18527 HP0104 HP0105 cpdB   FALSE 0.069 155.000 0.016 1.000 N 0.222
 18527 18528 HP0105 HP0106   metB TRUE 0.819 53.000 0.048 1.000 N 0.902
 18528 18529 HP0106 HP0107 metB cysK TRUE 0.989 25.000 0.690 0.015 Y 0.853
 18531 18532 HP0109 HP0110 dnaK grpE TRUE 0.968 30.000 0.029 0.013 Y 0.943
 18532 18533 HP0110 HP0111 grpE   TRUE 0.991 0.000 0.038 1.000 N 0.981
 18534 18535 HP0112 HP0113     TRUE 0.760 21.000 0.047 NA   -0.194
 18536 18537 HP0114 HP0115   flaB TRUE 0.829 60.000 0.700 NA   0.855
 18538 18539 HP0116 HP0117 topA   TRUE 0.883 -7.000 0.010 1.000 N 0.334
 18540 18541 HP0118 HP0119     FALSE 0.007 265.000 0.000 NA   0.239
 18541 18542 HP0119 HP0120     FALSE 0.028 285.000 0.000 NA   0.515
 18542 18543 HP0120 HP0121   ppsA FALSE 0.031 97.000 0.000 NA   0.108
 18544 18545 HP0122 HP0123   thrS TRUE 0.869 40.000 0.076 NA   0.693
 18545 18546 HP0123 HP0124 thrS infC TRUE 0.988 -3.000 0.060 1.000 Y 0.898
 18546 18547 HP0124 HP0125 infC rpl35 TRUE 0.961 -19.000 0.652 1.000 Y 0.706
 18547 18548 HP0125 HP0126 rpl35 rpl20 TRUE 0.871 94.000 0.928 0.037 Y 0.802
 18548 18549 HP0126 HP0127 rpl20 omp4 FALSE 0.016 200.000 0.007 NA   0.107
 18549 18550 HP0127 HP0128 omp4   TRUE 0.517 52.000 0.500 NA   -0.459
 18550 18551 HP0128 HP0129     FALSE 0.007 173.000 0.000 NA   0.018
 18551 18552 HP0129 HP0130     FALSE 0.002 411.000 0.000 NA   -0.014
 18552 18553 HP0130 HP0131     FALSE 0.001 715.000 0.000 NA   -0.357
 18554 18555 HP0132 HP0133 sdaA sdaC TRUE 0.993 0.000 0.350 1.000 Y 0.736
 18556 18557 HP0134 HP0135 dhs1   FALSE 0.216 79.000 0.012 NA   0.395
 18558 18559 HP0136 HP0137 bcp   TRUE 0.980 10.000 0.009 1.000   0.760
 18559 18560 HP0137 HP0138     TRUE 0.996 -7.000 0.209 0.003   0.940
 18560 18561 HP0138 HP0139     TRUE 0.959 29.000 0.657 1.000 Y 0.833
 18562 18563 HP0140 HP0141 lctP lctP TRUE 0.789 57.000 0.250 0.002 Y -0.023
 18564 10712217 HP0142 HP0143 mutY   FALSE 0.204 1.000 0.000 NA   NA
 18565 18566 HP0144 HP0145 fixN fixO TRUE 0.997 13.000 0.283 0.004 N 0.908
 18566 18567 HP0145 HP0146 fixO CcoQ TRUE 0.998 8.000 0.738 0.004 N 0.859
 18567 18568 HP0146 HP0147 CcoQ fixP TRUE 0.997 2.000 0.262 0.004 N 0.892
 18568 18569 HP0147 HP0148 fixP   TRUE 0.956 28.000 0.727 NA   0.940
 18569 18570 HP0148 HP0149     FALSE 0.262 101.000 0.375 NA   0.277
 18570 18571 HP0149 HP0150     TRUE 0.927 13.000 0.438 NA   -0.052
 18571 18572 HP0150 HP0151     TRUE 0.732 33.000 0.429 NA   0.120
 18574 18575 HP0153 HP0154 recA eno TRUE 0.976 12.000 0.033 1.000 N 0.593
 18575 18576 HP0154 HP0155 eno   TRUE 0.849 -7.000 0.080 NA   0.035
 18576 18577 HP0155 HP0156     TRUE 0.971 12.000 0.788 NA   0.413
 18577 18578 HP0156 HP0157   aroK TRUE 0.954 5.000 0.127 NA   0.430
 18578 18579 HP0157 HP0158 aroK   TRUE 0.869 22.000 0.078 1.000   0.087
 18581 18582 HP0160 HP0161     FALSE 0.003 343.000 0.000 NA   -0.439
 18583 18584 HP0162 HP0163   hemB TRUE 0.934 1.000 0.010 NA   0.430
 18584 18585 HP0163 HP0164 hemB   TRUE 0.489 72.000 0.028 1.000 N 0.475
 18585 18586 HP0164 HP0165     TRUE 0.979 -3.000 0.000 1.000   0.800
 18586 18587 HP0165 HP0166   ompR TRUE 0.859 26.000 0.000 1.000   0.584
 18587 18588 HP0166 HP0167 ompR   FALSE 0.003 236.000 0.000 NA   -0.187
 18588 18589 HP0167 HP0168     TRUE 0.850 -21.000 0.233 NA   0.425
 18589 18590 HP0168 HP0169   prtC TRUE 0.467 47.000 0.018 1.000   -0.271
 18590 18591 HP0169 HP0170 prtC   TRUE 0.894 3.000 0.068 NA   -0.041
 18591 18592 HP0170 HP0171   prfB FALSE 0.105 75.000 0.011 NA   -0.320
 18592 18593 HP0171 HP0172 prfB moeA FALSE 0.223 61.000 0.007 1.000 N -0.449
 18593 18594 HP0172 HP0173 moeA fliR TRUE 0.986 10.000 0.069 1.000 N 0.797
 18594 18595 HP0173 HP0174 fliR   TRUE 0.989 -6.000 0.069 0.068   0.543
 18596 18597 HP0175 HP0176   tsr TRUE 0.981 17.000 0.121 1.000 N 0.935
 18597 18598 HP0176 HP0177 tsr efp TRUE 0.955 22.000 0.012 1.000 N 0.877
 18599 18600 HP0178 HP0179     TRUE 0.980 4.000 0.018 1.000 N 0.701
 18600 18601 HP0179 HP0180   cute TRUE 0.985 -3.000 0.020 1.000 N 0.734
 18602 18603 HP0181 HP0182   lysS TRUE 0.963 10.000 0.023 1.000   0.460
 18603 18604 HP0182 HP0183 lysS glyA TRUE 0.991 0.000 0.044 1.000 N 0.854
 18604 18605 HP0183 HP0184 glyA   TRUE 0.987 11.000 0.271 1.000   0.612
 18605 18606 HP0184 HP0185     TRUE 0.962 22.000 0.258 NA   0.684
 18607 18608 HP0186 HP0187     FALSE 0.236 27.000 0.000 NA   0.073
 18608 18609 HP0187 HP0188     TRUE 0.798 61.000 0.667 NA   0.700
 18611 18612 HP0190 HP0191   frdB TRUE 0.825 22.000 0.019 1.000 N 0.238
 18612 18613 HP0191 HP0192 frdB frdA TRUE 0.992 -7.000 0.025 0.003 Y 0.842
 18613 18614 HP0192 HP0193 frdA frdC TRUE 0.997 10.000 0.276 0.003 Y 0.751
 18615 18616 HP0194 HP0195 tpi fabI TRUE 0.973 10.000 0.071 0.040 N 0.074
 18616 18617 HP0195 HP0196 fabI lpxD TRUE 0.980 10.000 0.018 1.000 N 0.715
 18617 18618 HP0196 HP0197 lpxD metX TRUE 0.443 65.000 0.011 1.000 N 0.443
 18618 18619 HP0197 HP0198 metX ndk TRUE 0.371 67.000 0.010 1.000 N 0.412
 18619 18620 HP0198 HP0199 ndk   TRUE 0.690 26.000 0.033 NA   0.239
 18620 18621 HP0199 HP0200   rpl32 TRUE 0.819 16.000 0.032 NA   0.076
 18621 18622 HP0200 HP0201 rpl32 plsX TRUE 0.502 75.000 0.418 1.000   0.276
 18622 18623 HP0201 HP0202 plsX fabH TRUE 0.982 25.000 0.058 0.010 Y 0.885
 18623 18624 HP0202 HP0203 fabH   TRUE 0.837 22.000 0.154 NA   0.194
 18625 18626 HP0204 HP0205     TRUE 0.677 16.000 0.009 NA   -0.067
 18626 18627 HP0205 HP0206     FALSE 0.062 204.000 0.000 NA   0.585
 18629 18630 HP0209 HP0210   htpG FALSE 0.117 104.000 0.010 1.000   -0.134
 18631 18632 HP0211 HP0212   dapE FALSE 0.200 80.000 0.013 1.000   -0.358
 18632 18633 HP0212 HP0213 dapE gidA TRUE 0.971 10.000 0.010 1.000 N 0.625
 18634 18635 HP0214 HP0215   cdsA TRUE 0.986 13.000 0.008 0.093 N 0.669
 18635 18636 HP0215 HP0216 cdsA   TRUE 0.991 1.000 0.372 1.000 Y 0.684
 18636 18637 HP0216 HP0217     TRUE 0.339 51.000 0.004 NA   0.392
 18639 18640 HP0219 HP0220   nifS FALSE 0.134 174.000 0.103 1.000   0.366
 18640 18641 HP0220 HP0221 nifS   TRUE 0.968 22.000 0.056 1.000 N 0.877
 18641 18642 HP0221 HP0222     FALSE 0.245 147.000 0.015 1.000   0.617
 18642 18643 HP0222 HP0223   sms FALSE 0.130 101.000 0.007 1.000   0.161
 18643 18644 HP0223 HP0224 sms msrA FALSE 0.050 124.000 0.008 1.000 Y -0.288
 18644 18645 HP0224 HP0225 msrA   FALSE 0.155 35.000 0.000 NA   0.003
 18646 18647 HP0226 HP0227   omp5 FALSE 0.059 211.000 0.000 NA   0.600
 1937497 18649 HPt08 HP0229 tRNA-Asn-1 omp6 FALSE 0.002 130.000 0.000 NA   NA
 18649 18650 HP0229 HP0230 omp6 kdsB FALSE 0.022 195.000 0.016 NA   0.051
 18651 18652 HP0231 HP0232     TRUE 0.968 16.000 0.258 NA   0.545
 18652 18653 HP0232 HP0233     TRUE 0.877 24.000 0.763 NA   0.207
 18653 18654 HP0233 HP0234     TRUE 0.987 0.000 0.211 NA   0.599
 18655 18656 HP0235 HP0236     FALSE 0.303 93.000 0.167 1.000   0.093
 18656 18657 HP0236 HP0237   hemC TRUE 0.971 0.000 0.008 1.000   0.466
 18657 18658 HP0237 HP0238 hemC proS TRUE 0.980 11.000 0.010 1.000 N 0.901
 18658 18659 HP0238 HP0239 proS hemA TRUE 0.989 4.000 0.040 0.054 N 0.528
 18659 18660 HP0239 HP0240 hemA ispB TRUE 0.969 0.000 0.051 1.000 Y 0.407
 18660 18661 HP0240 HP0241 ispB   TRUE 0.949 10.000 0.017 NA   0.505
 18661 18662 HP0241 HP0242     TRUE 0.944 -7.000 0.286 NA   0.423
 18662 18663 HP0242 HP0243   napA TRUE 0.967 21.000 0.121 NA   0.874
 18663 18664 HP0243 HP0244 napA atoS FALSE 0.016 206.000 0.000 1.000 N -0.648
 18664 18665 HP0244 HP0245 atoS   TRUE 0.947 -3.000 0.406 NA   0.019
 18665 18666 HP0245 HP0246   flgI TRUE 0.954 -3.000 0.569 NA   -0.414
 18667 18668 HP0247 HP0248 deaD   TRUE 0.976 21.000 0.119 1.000 N 0.963
 18668 18669 HP0248 HP0249     TRUE 0.982 7.000 0.119 NA   0.780
 18670 18671 HP0250 HP0251 oppD oppC TRUE 0.980 10.000 0.250 0.092   0.123
 18671 1937498 HP0251 HPt09 oppC tRNA-Ala-1 FALSE 0.003 111.000 0.000 NA   NA
 18672 18673 HP0252 HP0253 omp7   TRUE 0.894 13.000 0.000 NA   0.488
 18673 18674 HP0253 HP0254   omp8 TRUE 0.538 3.000 0.000 NA   -0.005
 18674 18675 HP0254 HP0255 omp8 purA FALSE 0.207 100.000 0.009 NA   0.478
 18675 18676 HP0255 HP0256 purA   TRUE 0.940 -3.000 0.009 NA   0.462
 18676 18677 HP0256 HP0257     TRUE 0.971 -7.000 0.093 NA   0.702
 18677 18678 HP0257 HP0258     TRUE 0.977 0.000 0.010 1.000   0.502
 18678 18679 HP0258 HP0259   xseA TRUE 0.942 13.000 0.011 1.000 N 0.443
 18680 18681 HP0260 HP0261 mod   TRUE 0.943 -7.000 0.727 NA   0.293
 18682 18683 HP0262 HP0263   hpaim FALSE 0.122 112.000 0.156 NA   -0.114
 18683 18684 HP0263 HP0264 hpaim clpB TRUE 0.396 73.000 0.216 1.000   0.007
 18684 18685 HP0264 HP0265 clpB ccdA TRUE 0.695 54.000 0.216 1.000   0.424
 18685 18686 HP0265 HP0266 ccdA pyrC TRUE 0.930 10.000 0.014 1.000 N 0.351
 18686 18687 HP0266 HP0267 pyrC   TRUE 0.915 -15.000 0.011 1.000 Y 0.673
 18687 18688 HP0267 HP0268     TRUE 0.660 61.000 0.066 NA   0.641
 18688 18689 HP0268 HP0269     TRUE 0.975 10.000 0.033 NA   0.693
 18689 18690 HP0269 HP0270     FALSE 0.136 205.000 0.029 NA   0.660
 18690 18691 HP0270 HP0271     TRUE 0.928 -7.000 0.462 NA   0.254
 18691 18692 HP0271 HP0272     TRUE 0.980 -10.000 1.000 NA   0.701
 18692 18693 HP0272 HP0273     TRUE 0.984 -3.000 0.276 NA   0.589
 18693 18694 HP0273 HP0274     TRUE 0.964 17.000 0.087 NA   0.643
 18694 18695 HP0274 HP0275   addB TRUE 0.829 37.000 0.228 NA   0.475
 18695 18696 HP0275 HP0276 addB   TRUE 0.690 -12.000 0.000 1.000   0.148
 18696 18697 HP0276 HP0277     TRUE 0.547 57.000 0.139 1.000   0.221
 18697 18698 HP0277 HP0278   gppA TRUE 0.968 10.000 0.806 1.000   -0.007
 18698 18699 HP0278 HP0279 gppA rfaC TRUE 0.976 -3.000 0.429 1.000 N 0.336
 18699 18700 HP0279 HP0280 rfaC ibpB TRUE 0.991 -3.000 0.231 1.000 Y 0.838
 18702 18703 HP0282 HP0283   aroB TRUE 0.984 5.000 0.031 1.000   0.706
 18703 18704 HP0283 HP0284 aroB   TRUE 0.971 -9.000 0.041 1.000 N 0.748
 18704 18705 HP0284 HP0285     TRUE 0.969 -3.000 0.063 1.000 N 0.422
 18705 18706 HP0285 HP0286   ftsH TRUE 0.814 -13.000 0.067 1.000 N -0.110
 18706 18707 HP0286 HP0287 ftsH   TRUE 0.958 3.000 0.237 NA   0.388
 18707 18708 HP0287 HP0288     TRUE 0.954 13.000 0.100 NA   0.458
 18708 18709 HP0288 HP0289     FALSE 0.293 67.000 0.172 NA   -0.180
 18709 18710 HP0289 HP0290   lysA TRUE 0.374 48.000 0.008 1.000   -0.166
 18710 18711 HP0290 HP0291 lysA   TRUE 0.947 5.000 0.009 1.000 Y 0.480
 18711 18712 HP0291 HP0292     TRUE 0.864 13.000 0.053 NA   -0.058
 18712 18713 HP0292 HP0293   pabB TRUE 0.962 1.000 0.021 NA   0.490
 18713 18714 HP0293 HP0294 pabB aimE FALSE 0.050 193.000 0.024 1.000   -0.153
 18716 18717 HP0296 HP0297 rpl21 rpl27 TRUE 0.996 15.000 0.667 0.035 Y 0.936
 18717 18718 HP0297 HP0298 rpl27 dppA FALSE 0.062 117.000 0.006 1.000 N -0.036
 18718 18719 HP0298 HP0299 dppA dppB TRUE 0.984 11.000 0.041 0.033 Y 0.457
 18719 18720 HP0299 HP0300 dppB dppC TRUE 0.998 0.000 0.779 0.033 Y 0.784
 18720 18721 HP0300 HP0301 dppC dppD TRUE 0.984 12.000 0.060 1.000 Y 0.915
 18721 18722 HP0301 HP0302 dppD dppF TRUE 0.997 -3.000 0.087 0.003   0.847
 18722 18723 HP0302 HP0303 dppF obg TRUE 0.961 20.000 0.008 1.000   0.796
 18723 18724 HP0303 HP0304 obg   TRUE 0.769 42.000 0.007 1.000   0.531
 18724 18725 HP0304 HP0305     FALSE 0.004 244.000 0.000 NA   -0.379
 18725 18726 HP0305 HP0306   hemL TRUE 0.976 10.000 0.154 NA   0.584
 18726 18727 HP0306 HP0307 hemL   TRUE 0.953 -3.000 0.462 NA   0.102
 18727 18728 HP0307 HP0308     TRUE 0.954 16.000 0.308 NA   0.447
 18728 18729 HP0308 HP0309     TRUE 0.351 84.000 0.800 NA   0.081
 18729 18730 HP0309 HP0310     TRUE 0.996 13.000 0.276 0.005   0.682
 18730 18731 HP0310 HP0311     TRUE 0.895 46.000 0.517 NA   0.913
 18731 18732 HP0311 HP0312     TRUE 0.992 0.000 0.788 NA   0.622
 18735 18736 HP0315 HP0316 vapD   TRUE 0.816 -19.000 0.000 NA   0.656
 18736 18737 HP0316 HP0317   omp9 FALSE 0.003 609.000 0.000 NA   0.171
 18737 18738 HP0317 HP0318 omp9   FALSE 0.006 297.000 0.000 NA   0.253
 18738 18739 HP0318 HP0319   argS FALSE 0.200 61.000 0.004 1.000 N -0.293
 18739 18740 HP0319 HP0320 argS   TRUE 0.906 3.000 0.020 1.000 N 0.057
 18740 18741 HP0320 HP0321   gmk TRUE 0.347 72.000 0.011 1.000 N 0.413
 18741 18742 HP0321 HP0322 gmk   TRUE 0.938 -7.000 0.000 NA   0.794
 18745 18746 HP0325 HP0326 flgH neuA TRUE 0.875 18.000 0.000 1.000 N 0.461
 18746 18747 HP0326 HP0327 neuA flaG TRUE 0.952 -3.000 0.137 1.000 N 0.046
 18748 18749 HP0328 HP0329   nadE TRUE 0.952 -3.000 0.024 1.000 N 0.352
 1937499 18750 HPt10 HP0330 tRNA-Arg-1 ilvC FALSE 0.004 91.000 0.000 NA   NA
 18750 18751 HP0330 HP0331 ilvC minD TRUE 0.934 25.000 0.012 1.000 N 0.794
 18751 18752 HP0331 HP0332 minD minE TRUE 0.990 -3.000 0.618 NA Y 0.872
 18752 18753 HP0332 HP0333 minE dprA TRUE 0.980 0.000 0.010 NA N 0.825
 18753 18754 HP0333 HP0334 dprA   TRUE 0.985 -3.000 0.026 1.000 Y 0.779
 18754 18755 HP0334 HP0335     FALSE 0.006 286.000 0.005 NA   -0.270
 18755 18756 HP0335 HP0336     TRUE 0.766 -58.000 0.000 NA   0.885
 18756 18757 HP0336 HP0337     FALSE 0.195 127.000 0.000 NA   0.789
 18757 18758 HP0337 HP0338     TRUE 0.857 -16.000 1.000 NA   -0.316
 18758 18759 HP0338 HP0339     TRUE 0.332 58.000 0.108 NA   0.046
 18759 18760 HP0339 HP0340     TRUE 0.932 -12.000 0.081 NA   0.534
 18760 18761 HP0340 HP0341     TRUE 0.878 12.000 0.000 NA   0.457
 18761 18762 HP0341 HP0342     FALSE 0.065 193.000 0.000 NA   0.559
 18762 18763 HP0342 HP0343     TRUE 0.980 0.000 0.014 NA   0.676
 18763 18764 HP0343 HP0344     TRUE 0.598 -100.000 0.000 NA   0.597
 18764 18765 HP0344 HP0345     TRUE 0.878 -10.000 0.000 NA   0.593
 18765 18766 HP0345 HP0346     FALSE 0.180 120.000 0.000 NA   0.667
 18767 18768 HP0347 HP0348   recJ TRUE 0.910 0.000 0.010 1.000 N -0.104
 18768 18769 HP0348 HP0349 recJ pyrG TRUE 0.901 9.000 0.026 1.000 N 0.029
 18770 18771 HP0350 HP0351   fliF TRUE 0.653 44.000 0.032 1.000   0.301
 18771 18772 HP0351 HP0352 fliF fliG TRUE 0.983 18.000 0.477 0.014 Y 0.402
 18772 18773 HP0352 HP0353 fliG fliH TRUE 0.990 -13.000 0.308 0.008 Y 0.822
 18773 18774 HP0353 HP0354 fliH dxs TRUE 0.988 -3.000 0.052 1.000 N 0.758
 18774 18775 HP0354 HP0355 dxs lepA TRUE 0.982 -3.000 0.008 1.000 N 0.802
 18775 18776 HP0355 HP0356 lepA   TRUE 0.703 15.000 0.007 NA   -0.607
 18777 18778 HP0357 HP0358     TRUE 0.782 18.000 0.035 NA   -0.029
 1937500 1937501 HPt11 HPt12 tRNA-Ala-2 tRNA-Ile-1 FALSE 0.099 18.000 0.000 NA   NA
 18781 18782 HP0361 HP0362 hisT   TRUE 0.950 1.000 0.059 1.000   0.056
 18782 18783 HP0362 HP0363   pcm TRUE 0.890 11.000 0.012 1.000   -0.224
 18783 18784 HP0363 HP0364 pcm nrdB TRUE 0.989 10.000 0.227 1.000 N 0.756
 1937502 18785 HPt13 HP0365 tRNA-Leu-4   FALSE 0.022 -75.000 0.000 NA   NA
 18786 18787 HP0366 HP0367     TRUE 0.984 -3.000 0.053 NA   0.748
 18787 18788 HP0367 HP0368     FALSE 0.297 93.000 0.778 NA   -0.387
 18788 18789 HP0368 HP0369     FALSE 0.187 146.000 0.444 NA   0.423
 18789 18790 HP0369 HP0370   accC FALSE 0.049 226.000 0.015 1.000   0.290
 18790 18791 HP0370 HP0371 accC fabE TRUE 0.992 6.000 0.071 0.003 Y 0.504
 18792 18793 HP0372 HP0373 dcd   FALSE 0.046 159.000 0.017 NA   0.251
 18794 18795 HP0374 HP0375     TRUE 0.984 1.000 0.098 NA   0.671
 18796 18797 HP0376 HP0377 hemH dsbC FALSE 0.212 77.000 0.024 1.000 N -0.221
 18797 18798 HP0377 HP0378 dsbC ycf5 TRUE 0.958 10.000 0.750 1.000 Y -0.409
 18798 18799 HP0378 HP0379 ycf5   TRUE 0.980 10.000 0.118 0.088   0.221
 18800 18801 HP0380 HP0381 gdhA hemK FALSE 0.261 66.000 0.020 1.000 N -0.085
 18801 18802 HP0381 HP0382 hemK   TRUE 0.988 -3.000 0.068 1.000 N 0.731
 18805 18806 HP0385 HP0386     TRUE 0.986 13.000 0.400 NA   0.791
 18806 18807 HP0386 HP0387   priA TRUE 0.881 -15.000 0.003 NA   0.678
 18808 18809 HP0388 HP0389   sodB TRUE 0.567 55.000 0.018 1.000 N 0.464
 18811 18812 HP0391 HP0392 cheW cheA TRUE 0.996 -3.000 0.137 0.013 Y 0.727
 18812 18813 HP0392 HP0393 cheA cheV TRUE 0.722 57.000 0.147 0.008 Y -0.136
 18813 18814 HP0393 HP0394 cheV   TRUE 0.938 4.000 0.065 1.000   -0.483
 18814 18815 HP0394 HP0395     TRUE 0.836 2.000 0.015 NA   -0.390
 18815 18816 HP0395 HP0396     TRUE 0.917 23.000 0.017 NA   0.667
 18816 18817 HP0396 HP0397   serA TRUE 0.950 10.000 0.016 NA Y 0.595
 18817 18818 HP0397 HP0398 serA   TRUE 0.704 16.000 0.006 NA   0.144
 18818 18819 HP0398 HP0399   rps1 TRUE 0.788 29.000 0.005 NA   0.575
 18819 18820 HP0399 HP0400 rps1 lytB FALSE 0.121 121.000 0.058 1.000 N -0.195
 18820 18821 HP0400 HP0401 lytB aroA TRUE 0.891 -10.000 0.032 1.000 N 0.347
 18821 18822 HP0401 HP0402 aroA pheT TRUE 0.963 16.000 0.028 1.000 N 0.553
 18822 18823 HP0402 HP0403 pheT pheS TRUE 0.998 0.000 0.574 0.002 Y 0.894
 18824 18825 HP0404 HP0405     TRUE 0.940 19.000 0.014 1.000 N 0.530
 18825 18826 HP0405 HP0406     TRUE 0.748 26.000 0.105 NA   0.216
 18826 18827 HP0406 HP0407   bisC FALSE 0.194 104.000 0.241 NA   0.182
 18827 18828 HP0407 HP0408 bisC   FALSE 0.119 166.000 0.875 NA   0.094
 18828 18829 HP0408 HP0409   guaA TRUE 0.967 11.000 0.007 NA   0.801
 18829 18830 HP0409 HP0410 guaA hpaA TRUE 0.425 85.000 0.007 1.000   0.537
 18830 18831 HP0410 HP0411 hpaA   FALSE 0.021 96.000 0.000 NA   -0.232
 18831 1937503 HP0411 HPt14   tRNA-Pro-2 FALSE 0.018 -162.000 0.000 NA   NA
 1937503 1937504 HPt14 HPt15 tRNA-Pro-2 tRNA-His-1 FALSE 0.007 69.000 0.000 NA   NA
 1937504 1937505 HPt15 HPt16 tRNA-His-1 tRNA-Arg-2 FALSE 0.009 61.000 0.000 NA   NA
 1937505 1937506 HPt16 HPt17 tRNA-Arg-2 tRNA-Arg-3 FALSE 0.047 26.000 0.000 NA   NA
 1937506 18832 HPt17 HP0412 tRNA-Arg-3   FALSE 0.035 30.000 0.000 NA   NA
 18834 18835 HP0414 HP0415     FALSE 0.006 395.000 0.000 1.000 N -0.359
 18837 18838 HP0417 HP0418 metS   TRUE 0.988 1.000 0.046 1.000   0.679
 18838 18839 HP0418 HP0419     TRUE 0.980 4.000 0.033 NA   0.900
 18839 18840 HP0419 HP0420     TRUE 0.963 17.000 0.053 NA   0.676
 18840 18841 HP0420 HP0421   capJ TRUE 0.964 5.000 0.093 NA N 0.518
 18841 18842 HP0421 HP0422 capJ speA TRUE 0.969 15.000 0.024 1.000 N 0.595
 18843 18844 HP0423 HP0424     FALSE 0.147 116.000 0.400 NA   -0.144
 18844 18845 HP0424 HP0425     TRUE 0.900 42.000 0.571 NA   0.673
 18845 18846 HP0425 HP0426     TRUE 0.817 41.000 0.714 NA   0.423
 18846 18847 HP0426 HP0427     TRUE 0.606 50.000 0.000 NA   0.702
 1937507 406582 HPr01 HPr02 HPrrnA23S HPrrnA5S FALSE 0.001 228.000 0.000 NA   NA
 406582 18848 HPr02 HP0428 HPrrnA5S   FALSE 0.000 565.000 0.000 NA   NA
 18848 18849 HP0428 HP0429     FALSE 0.013 125.000 0.000 NA   0.047
 18849 18850 HP0429 HP0430     TRUE 0.371 86.000 0.000 NA   0.796
 18850 18851 HP0430 HP0431   ptc1 TRUE 0.984 4.000 0.300 NA   0.649
 18851 18852 HP0431 HP0432 ptc1   TRUE 0.960 -9.000 0.200 1.000 Y 0.511
 18852 18853 HP0432 HP0433     FALSE 0.260 28.000 0.000 NA   0.123
 18853 18854 HP0433 HP0434     TRUE 0.919 -6.000 0.000 NA   0.581
 18854 18855 HP0434 HP0435     TRUE 0.441 71.000 0.000 NA   0.743
 18855 18856 HP0435 HP0436     TRUE 0.722 -16.000 0.000 NA   0.488
 18859 18860 HP0439 HP0440   topA FALSE 0.204 117.000 0.002 NA N 0.669
 18860 18861 HP0440 HP0441 topA   TRUE 0.969 3.000 0.002 1.000 N 0.620
 18861 18862 HP0441 HP0442     TRUE 0.522 -7.000 0.000 NA   0.131
 18862 18863 HP0442 HP0443     TRUE 0.972 1.000 0.667 NA   0.337
 18863 18864 HP0443 HP0444     TRUE 0.944 -3.000 0.000 NA   0.551
 18864 18865 HP0444 HP0445     FALSE 0.273 116.000 0.500 NA   0.420
 18865 18866 HP0445 HP0446     TRUE 0.931 19.000 1.000 NA   0.181
 18867 18868 HP0447 HP0448     TRUE 0.957 -3.000 0.000 NA   0.648
 18868 18869 HP0448 HP0449     FALSE 0.035 247.000 0.000 NA   0.514
 18869 18870 HP0449 HP0450     TRUE 0.993 -3.000 1.000 NA   0.824
 18870 18871 HP0450 HP0451     TRUE 0.632 111.000 1.000 NA   0.908
 18871 18872 HP0451 HP0452     TRUE 0.429 76.000 0.000 NA   0.861
 18872 18873 HP0452 HP0453     TRUE 0.755 7.000 0.000 NA   0.298
 18873 18874 HP0453 HP0454     TRUE 0.689 -37.000 0.000 NA   0.544
 18874 18875 HP0454 HP0455     FALSE 0.064 247.000 0.000 NA   0.725
 18875 18876 HP0455 HP0456     FALSE 0.037 432.000 0.000 NA   0.767
 18876 18877 HP0456 HP0457     FALSE 0.034 318.000 0.000 NA   0.631
 18877 18878 HP0457 HP0458     TRUE 0.987 12.000 1.000 NA   0.596
 18878 18879 HP0458 HP0459   virB4 TRUE 0.993 0.000 0.500 NA   0.875
 18879 18880 HP0459 HP0460 virB4   FALSE 0.067 130.000 0.000 NA   0.455
 18881 18882 HP0461 HP0462   hsdS FALSE 0.036 413.000 0.000 NA   0.716
 18882 18883 HP0462 HP0463 hsdS hsdM FALSE 0.209 160.000 0.150 0.072 Y 0.195
 18883 18884 HP0463 HP0464 hsdM hsdR TRUE 0.985 -7.000 0.075 0.072 Y 0.593
 18884 18885 HP0464 HP0465 hsdR   TRUE 0.471 48.000 0.111 NA   0.124
 18885 18886 HP0465 HP0466     TRUE 0.779 25.000 0.025 NA   0.406
 18886 18887 HP0466 HP0467     TRUE 0.980 10.000 0.040 NA   0.870
 18887 18888 HP0467 HP0468     TRUE 0.797 -31.000 0.500 NA   0.267
 18888 18889 HP0468 HP0469     TRUE 0.972 12.000 0.294 NA   0.489
 18889 18890 HP0469 HP0470   pepF TRUE 0.947 -15.000 0.115 NA   0.794
 18890 18891 HP0470 HP0471 pepF kefB FALSE 0.164 98.000 0.028 1.000 N -0.408
 18891 18892 HP0471 HP0472 kefB omp11 FALSE 0.002 320.000 0.000 NA   -0.114
 18893 18894 HP0473 HP0474 modA modB TRUE 0.993 22.000 0.660 0.002 Y 0.689
 18894 18895 HP0474 HP0475 modB modD TRUE 0.972 -3.000 0.286 1.000 Y 0.360
 18897 18898 HP0477 HP0478 omp12   TRUE 0.975 9.000 0.875 NA   0.433
 18898 18899 HP0478 HP0479     TRUE 0.895 -34.000 0.273 1.000 N 0.482
 18899 18900 HP0479 HP0480   yihK TRUE 0.377 46.000 0.008 1.000 N -0.630
 18900 18901 HP0480 HP0481 yihK   TRUE 0.892 16.000 0.008 1.000 N 0.381
 18901 18902 HP0481 HP0482     FALSE 0.021 296.000 0.091 NA   -0.336
 18902 10712219 HP0482 HP0483     FALSE 0.004 259.000 0.000 NA   -0.638
 10712219 18903 HP0483 HP0484     TRUE 0.553 2.000 0.000 NA   -0.307
 18905 18906 HP0486 HP0487     TRUE 0.963 27.000 0.875 0.015   0.183
 18906 18907 HP0487 HP0488     FALSE 0.004 399.000 0.000 NA   0.203
 18907 18908 HP0488 HP0489     TRUE 0.781 14.000 0.000 NA   0.364
 18909 18910 HP0490 HP0491   rpL28 FALSE 0.067 149.000 0.025 1.000 N 0.053
 18910 18911 HP0491 HP0492 rpL28   FALSE 0.123 100.000 0.008 1.000   0.012
 18912 18913 HP0493 HP0494 mraY murD TRUE 0.988 2.000 0.647 0.007 Y 0.023
 18914 18915 HP0495 HP0496     TRUE 0.843 -10.000 0.043 NA   0.309
 18916 18917 HP0497 HP0498     TRUE 0.997 11.000 0.800 0.002   0.497
 18917 18918 HP0498 HP0499     TRUE 0.986 15.000 0.184 1.000   0.746
 18918 18919 HP0499 HP0500   dnaN FALSE 0.227 58.000 0.007 1.000 N -0.251
 18919 18920 HP0500 HP0501 dnaN gyrB TRUE 0.919 13.000 0.114 1.000 Y 0.031
 18920 18921 HP0501 HP0502 gyrB   FALSE 0.229 46.000 0.008 NA   -0.413
 18921 18922 HP0502 HP0503     FALSE 0.025 89.000 0.000 NA   -0.024
 18922 18923 HP0503 HP0504     TRUE 0.811 -13.000 0.273 NA   -0.131
 18923 18924 HP0504 HP0505     FALSE 0.008 141.000 0.000 NA   -0.066
 18924 18925 HP0505 HP0506     FALSE 0.007 204.000 0.000 NA   0.120
 18925 18926 HP0506 HP0507     TRUE 0.990 0.000 0.269 1.000 N 0.569
 18926 18927 HP0507 HP0508     TRUE 0.941 11.000 0.000 NA   0.629
 18927 18928 HP0508 HP0509   glcD TRUE 0.965 2.000 0.000 NA   0.899
 18928 18929 HP0509 HP0510 glcD dapB TRUE 0.949 22.000 0.009 1.000 N 0.799
 18929 18930 HP0510 HP0511 dapB   FALSE 0.002 426.000 0.000 NA   -0.290
 18932 18933 HP0513 HP0514   rpl9 FALSE 0.110 61.000 0.005 NA   -0.006
 18933 18934 HP0514 HP0515 rpl9 hslV TRUE 0.983 4.000 0.034 1.000 N 0.710
 18934 18935 HP0515 HP0516 hslV hslU TRUE 0.980 0.000 0.752 1.000 Y 0.256
 18935 18936 HP0516 HP0517 hslU era TRUE 0.981 -3.000 0.051 1.000   0.507
 18936 18937 HP0517 HP0518 era   TRUE 0.986 -3.000 0.125 NA   0.713
 18939 10712220 HP0520 HP0521 cag1   FALSE 0.003 108.000 0.000 NA   NA
 10712220 18940 HP0521 HP0522   cag3 FALSE 0.003 109.000 0.000 NA   NA
 18940 18941 HP0522 HP0523 cag3 cag4 TRUE 0.990 10.000 0.778 NA   0.790
 18942 18943 HP0524 HP0525 cag5   TRUE 0.989 9.000 0.429 1.000 Y 0.733
 18943 18944 HP0525 HP0526   cag6 TRUE 0.959 5.000 0.583 NA   0.311
 18944 18945 HP0526 HP0527 cag6 cag7 FALSE 0.135 138.000 0.286 NA   0.277
 18945 18946 HP0527 HP0528 cag7 cag8 TRUE 0.962 15.000 0.150 1.000 N 0.436
 18946 18947 HP0528 HP0529 cag8 cag9 TRUE 0.802 53.000 0.150 NA   0.831
 18947 18948 HP0529 HP0530 cag9 cag10 TRUE 0.984 5.000 0.444 NA   0.630
 18949 18950 HP0531 HP0532 cag11 cag12 TRUE 0.554 36.000 0.000 NA   0.460
 18951 18952 HP0533 HP0534   cag13 TRUE 0.934 2.000 0.286 NA   -0.138
 18952 18953 HP0534 HP0535 cag13 cag14 FALSE 0.007 426.000 0.000 NA   0.352
 18953 18954 HP0535 HP0536 cag14 cag15 FALSE 0.002 433.000 0.000 NA   -0.002
 18955 18956 HP0537 HP0538 cag16 cag17 TRUE 0.988 15.000 1.000 NA   0.750
 18957 18958 HP0539 HP0540 cag18 cag19 TRUE 0.972 -3.000 0.429 NA   0.420
 18958 18959 HP0540 HP0541 cag19 cag20 TRUE 0.973 11.000 0.857 NA   0.418
 18959 18960 HP0541 HP0542 cag20 cag21 TRUE 0.977 16.000 0.333 NA   0.649
 18960 18961 HP0542 HP0543 cag21 cag22 TRUE 0.581 55.000 0.500 NA   0.339
 18961 18962 HP0543 HP0544 cag22 cag23 TRUE 0.929 2.000 0.231 NA   -0.004
 18962 18963 HP0544 HP0545 cag23 cag24 TRUE 0.914 9.000 0.231 NA   -0.140
 18963 18964 HP0545 HP0546 cag24 cag25 TRUE 0.987 2.000 1.000 NA   0.539
 18965 10712221 HP0547 HP0548 cag26   FALSE 0.002 129.000 0.000 NA   NA
 18966 18967 HP0549 HP0550 glr rho TRUE 0.873 38.000 0.023 1.000 N 0.653
 18968 18969 HP0551 HP0552 rpl31   TRUE 0.763 25.000 0.031 1.000   -0.132
 18969 18970 HP0552 HP0553     TRUE 0.985 13.000 0.031 1.000   0.857
 18970 18971 HP0553 HP0554     TRUE 0.977 13.000 0.033 NA   0.943
 18971 18972 HP0554 HP0555     TRUE 0.987 -3.000 0.882 NA   0.515
 18973 18974 HP0556 HP0557   accA FALSE 0.001 469.000 0.000 NA   -0.116
 18974 18975 HP0557 HP0558 accA fabF TRUE 0.934 23.000 0.046 1.000 Y 0.585
 18975 18976 HP0558 HP0559 fabF acpP FALSE 0.085 308.000 0.066 1.000 Y 0.569
 18976 18977 HP0559 HP0560 acpP   FALSE 0.130 53.000 0.004 NA   -0.096
 18977 18978 HP0560 HP0561   fabG FALSE 0.093 98.000 0.005 NA   0.292
 18978 18979 HP0561 HP0562 fabG rps21 TRUE 0.868 42.000 0.017 1.000   0.719
 18979 18980 HP0562 HP0563 rps21   TRUE 0.441 101.000 0.154 NA   0.588
 18982 18983 HP0565 HP0566   dapF FALSE 0.106 107.000 0.009 NA   0.345
 18985 18986 HP0568 HP0569   gtp1 FALSE 0.064 135.000 0.009 1.000   0.030
 18986 18987 HP0569 HP0570 gtp1 pepA TRUE 0.984 2.000 0.026 1.000 N 0.729
 18987 18988 HP0570 HP0571 pepA   TRUE 0.517 48.000 0.250 NA   0.073
 18988 18989 HP0571 HP0572   apt TRUE 0.864 15.000 0.026 NA   0.254
 18989 18990 HP0572 HP0573 apt   FALSE 0.288 58.000 0.028 NA   0.209
 18990 18991 HP0573 HP0574   lacA TRUE 0.459 52.000 0.277 NA   0.007
 18991 18992 HP0574 HP0575 lacA   TRUE 0.966 21.000 0.042 1.000   0.663
 18992 18993 HP0575 HP0576   lepB TRUE 0.976 9.000 0.055 0.025   -0.185
 18993 18994 HP0576 HP0577 lepB folD TRUE 0.988 0.000 0.117 1.000 N 0.544
 18994 18995 HP0577 HP0578 folD   FALSE 0.225 74.000 0.025 1.000 N -0.156
 18995 18996 HP0578 HP0579     TRUE 0.974 6.000 0.727 NA   0.451
 18996 18997 HP0579 HP0580     TRUE 0.981 7.000 0.216 NA   0.649
 18997 18998 HP0580 HP0581   pyrC TRUE 0.917 -24.000 0.018 1.000 N 0.718
 18998 18999 HP0581 HP0582 pyrC   TRUE 0.968 4.000 0.015 1.000 N 0.529
 18999 19000 HP0582 HP0583     TRUE 0.884 -16.000 0.333 NA   0.427
 19000 19001 HP0583 HP0584   fliN TRUE 0.939 -3.000 0.281 NA   -0.074
 19001 19002 HP0584 HP0585 fliN nth FALSE 0.142 82.000 0.009 1.000 N -0.051
 19002 19003 HP0585 HP0586 nth   FALSE 0.080 229.000 0.000 NA   0.903
 19004 19005 HP0587 HP0588 pabC   FALSE 0.037 185.000 0.012 NA   0.298
 19005 19006 HP0588 HP0589     TRUE 0.998 0.000 0.316 0.003 Y 0.918
 19006 19007 HP0589 HP0590     TRUE 0.998 2.000 0.771 0.003 Y 0.964
 19007 19008 HP0590 HP0591     TRUE 0.998 0.000 0.324 0.003 Y 0.909
 19008 19009 HP0591 HP0592   res FALSE 0.235 97.000 0.139 1.000 N -0.089
 19009 19010 HP0592 HP0593 res mod TRUE 0.650 74.000 0.667 0.069 N -0.155
 19010 19011 HP0593 HP0594 mod   FALSE 0.184 97.000 0.214 NA   -0.067
 19011 19012 HP0594 HP0595     TRUE 0.985 10.000 0.667 NA   0.608
 19012 19013 HP0595 HP0596     FALSE 0.014 474.000 0.000 NA   0.480
 19014 19015 HP0597 HP0598   bioF TRUE 0.988 1.000 0.050 1.000 N 0.701
 19015 19016 HP0598 HP0599 bioF hylB TRUE 0.795 23.000 0.033 1.000 N -0.583
 19016 19017 HP0599 HP0600 hylB spaB FALSE 0.310 72.000 0.069 1.000 N -0.327
 19018 19019 HP0601 HP0602 flaA   FALSE 0.122 118.000 0.042 1.000 N -0.471
 19019 19020 HP0602 HP0603     TRUE 0.823 45.000 0.042 NA   0.768
 19020 19021 HP0603 HP0604   hemE FALSE 0.135 66.000 0.010 NA   0.047
 19021 19022 HP0604 HP0605 hemE   TRUE 0.966 9.000 0.010 1.000 N 0.557
 19022 19023 HP0605 HP0606   mtrC TRUE 0.992 11.000 0.655 1.000 N 0.809
 19023 19024 HP0606 HP0607 mtrC acrB TRUE 0.987 13.000 0.844 1.000 Y 0.572
 19024 19025 HP0607 HP0608 acrB   TRUE 0.634 84.000 0.281 0.058   0.228
 19025 19026 HP0608 HP0609     TRUE 0.416 145.000 0.600 0.015   0.099
 19026 19027 HP0609 HP0610     TRUE 0.989 14.000 0.286 0.005   0.299
 19028 19029 HP0611 HP0612     TRUE 0.919 17.000 0.800 NA   -0.126
 19029 19030 HP0612 HP0613     TRUE 0.954 0.000 0.333 NA   -0.048
 19030 19031 HP0613 HP0614     FALSE 0.011 295.000 0.000 1.000   -0.390
 19031 19032 HP0614 HP0615   lig TRUE 0.344 104.000 0.008 1.000   0.557
 19033 19034 HP0616 HP0617 cheV aspS TRUE 0.530 35.000 0.010 1.000 N -0.021
 19034 19035 HP0617 HP0618 aspS adk TRUE 0.966 17.000 0.025 1.000 N 0.647
 19035 10712222 HP0618 HP0619 adk   FALSE 0.052 25.000 0.000 NA   NA
 10712222 19036 HP0619 HP0620   ppa FALSE 0.013 52.000 0.000 NA   NA
 19037 19038 HP0621 HP0622 MutS   TRUE 0.529 -39.000 0.021 NA   0.203
 19038 19039 HP0622 HP0623   murC TRUE 0.860 0.000 0.013 NA   -0.080
 19039 19040 HP0623 HP0624 murC aspB TRUE 0.970 -7.000 0.016 1.000 N 0.738
 19041 19042 HP0625 HP0626 gcpE dapD TRUE 0.974 3.000 0.009 1.000 N 0.626
 19042 19043 HP0626 HP0627 dapD   TRUE 0.984 12.000 0.164 NA   0.843
 19043 19044 HP0627 HP0628     TRUE 0.622 49.000 0.000 NA   0.712
 19044 19045 HP0628 HP0629     FALSE 0.056 157.000 0.100 NA   -0.162
 19047 19048 HP0631 HP0632 hydA hydB TRUE 0.998 10.000 0.951 0.002 Y 0.943
 19048 19049 HP0632 HP0633 hydB hydC TRUE 0.995 13.000 0.270 0.035 Y 0.967
 19049 19050 HP0633 HP0634 hydC hydD TRUE 0.991 -3.000 0.277 1.000 Y 0.750
 19050 19051 HP0634 HP0635 hydD   TRUE 0.954 2.000 0.171 NA   0.357
 19052 19053 HP0636 HP0637     FALSE 0.177 129.000 1.000 NA   -0.032
 19056 19057 HP0640 HP0641 papS   TRUE 0.905 14.000 0.014 1.000   0.209
 19057 19058 HP0641 HP0642     TRUE 0.992 2.000 0.000 0.016   0.914
 19058 19059 HP0642 HP0643   gltX FALSE 0.068 165.000 0.029 1.000 N 0.176
 19059 19060 HP0643 HP0644 gltX   TRUE 0.970 -3.000 0.088 1.000   0.356
 19060 19061 HP0644 HP0645   slt TRUE 0.909 9.000 0.080 NA   0.194
 19061 19062 HP0645 HP0646 slt galU TRUE 0.942 -3.000 0.323 NA Y 0.238
 19062 19063 HP0646 HP0647 galU   TRUE 0.944 12.000 0.533 NA   0.151
 19063 19064 HP0647 HP0648   murZ TRUE 0.898 3.000 0.017 NA   0.306
 19064 19065 HP0648 HP0649 murZ aspA FALSE 0.309 58.000 0.020 1.000 N -0.297
 19065 19066 HP0649 HP0650 aspA   TRUE 0.564 45.000 0.071 1.000 N 0.011
 19067 19068 HP0651 HP0652   serB TRUE 0.411 40.000 0.000 1.000   0.112
 19068 19069 HP0652 HP0653 serB pfr TRUE 0.975 15.000 0.014 1.000 N 0.781
 19070 19071 HP0654 HP0655     FALSE 0.194 83.000 0.018 1.000 N -0.612
 19071 19072 HP0655 HP0656     TRUE 0.869 -88.000 0.033 1.000 N 0.817
 19072 19073 HP0656 HP0657   ymxG TRUE 0.990 6.000 0.130 1.000   0.882
 19073 19074 HP0657 HP0658 ymxG gatB TRUE 0.984 -3.000 0.010 1.000   0.716
 19074 19075 HP0658 HP0659 gatB   TRUE 0.988 0.000 0.008 1.000   0.790
 19075 19076 HP0659 HP0660     TRUE 0.990 10.000 0.154 1.000   0.816
 19076 19077 HP0660 HP0661   rnhA TRUE 0.920 -13.000 0.008 1.000   0.574
 19077 19078 HP0661 HP0662 rnhA rnc TRUE 0.973 9.000 0.032 1.000 N 0.545
 19078 19079 HP0662 HP0663 rnc aroC TRUE 0.985 -3.000 0.030 1.000 N 0.669
 19079 19080 HP0663 HP0664 aroC   TRUE 0.319 38.000 0.008 NA   0.050
 19080 19081 HP0664 HP0665   hemN TRUE 0.968 0.000 0.419 NA   0.263
 19081 19082 HP0665 HP0666 hemN glpC TRUE 0.996 -3.000 0.419 0.018 N 0.606
 19082 19083 HP0666 HP0667 glpC   FALSE 0.227 76.000 0.074 NA   0.142
 19083 19084 HP0667 HP0668     TRUE 0.819 -25.000 0.000 NA   0.722
 19084 19085 HP0668 HP0669     TRUE 0.647 -85.000 0.000 1.000   0.495
 19085 19086 HP0669 HP0670     TRUE 0.968 -3.000 0.250 NA   0.421
 19086 19087 HP0670 HP0671   omp14 FALSE 0.123 122.000 0.250 NA   0.033
 19087 19088 HP0671 HP0672 omp14 aspB FALSE 0.061 159.000 0.082 NA   0.128
 19088 19089 HP0672 HP0673 aspB   FALSE 0.153 82.000 0.041 NA   -0.268
 19089 19090 HP0673 HP0674     TRUE 0.779 -28.000 0.000 NA   0.642
 19090 19091 HP0674 HP0675   xerC TRUE 0.483 7.000 0.000 NA   -0.200
 19092 19093 HP0676 HP0677 dat1   TRUE 0.933 4.000 0.054 1.000   -0.003
 19093 19094 HP0677 HP0678     FALSE 0.014 114.000 0.000 NA   -0.270
 19094 19095 HP0678 HP0679   wbpB FALSE 0.229 -31.000 0.000 NA   0.116
 19095 19096 HP0679 HP0680 wbpB nrdA TRUE 0.671 62.000 0.054 1.000   0.524
 19096 19097 HP0680 HP0681 nrdA   FALSE 0.066 172.000 0.114 NA   0.214
 19097 19098 HP0681 HP0682     TRUE 0.909 40.000 0.333 NA   0.742
 19098 19099 HP0682 HP0683   glmU FALSE 0.075 154.000 0.002 NA   0.469
 19100 19101 HP0684 HP0685 fliP fliP TRUE 0.932 -31.000 0.000 0.009   0.547
 19102 19103 HP0686 HP0687 fecA feoB FALSE 0.021 248.000 0.000 1.000 Y 0.389
 19104 19105 HP0688 HP0689     TRUE 0.923 21.000 0.000 0.020 Y 0.366
 19105 19106 HP0689 HP0690   fadA FALSE 0.008 282.000 0.000 1.000 N -0.050
 19106 19107 HP0690 HP0691 fadA yxjD TRUE 0.989 11.000 0.429 1.000 Y 0.781
 19107 19108 HP0691 HP0692 yxjD yxjE TRUE 0.997 -3.000 0.083 0.002 Y 0.880
 19108 19109 HP0692 HP0693 yxjE   TRUE 0.968 20.000 0.074 1.000 Y 0.710
 19109 19110 HP0693 HP0694     FALSE 0.125 125.000 0.348 NA   -0.066
 19110 19111 HP0694 HP0695   hyuA FALSE 0.002 456.000 0.000 NA   -0.518
 19111 19112 HP0695 HP0696 hyuA   TRUE 0.982 12.000 0.133 1.000 Y 0.626
 19112 19113 HP0696 HP0697     TRUE 0.989 11.000 0.882 NA Y 0.873
 19113 19114 HP0697 HP0698     FALSE 0.007 188.000 0.000 NA   -0.494
 19114 19115 HP0698 HP0699     TRUE 0.767 40.000 0.000 NA   0.815
 19115 19116 HP0699 HP0700   dgkA TRUE 0.978 -7.000 0.562 NA   0.636
 19116 19117 HP0700 HP0701 dgkA gyrA TRUE 0.889 20.000 0.009 1.000 N 0.436
 19117 19118 HP0701 HP0702 gyrA   TRUE 0.962 -3.000 0.012 NA   0.537
 19118 19119 HP0702 HP0703     TRUE 0.981 -3.000 0.282 NA   0.523
 19119 19120 HP0703 HP0704     FALSE 0.005 461.000 0.000 NA   0.290
 19122 19123 HP0706 HP0707 omp15   FALSE 0.090 179.000 0.008 NA   0.533
 19123 19124 HP0707 HP0708     TRUE 0.954 21.000 0.031 NA   0.781
 19124 19125 HP0708 HP0709     FALSE 0.028 246.000 0.010 NA   0.386
 19125 19126 HP0709 HP0710     FALSE 0.046 271.000 0.000 NA   0.655
 19126 19127 HP0710 HP0711     FALSE 0.112 190.000 0.015 NA   0.579
 19127 19128 HP0711 HP0712     TRUE 0.897 0.000 0.020 NA   0.086
 19128 19129 HP0712 HP0713     TRUE 0.993 -15.000 0.500 0.003   0.801
 19130 19131 HP0714 HP0715 rpoN   TRUE 0.986 3.000 0.044 1.000   0.686
 19131 19132 HP0715 HP0716     TRUE 0.941 13.000 0.039 1.000   0.283
 19132 19133 HP0716 HP0717   dnaX TRUE 0.980 -3.000 0.012 0.020   0.247
 19133 19134 HP0717 HP0718 dnaX   FALSE 0.251 69.000 0.011 1.000   -0.554
 19135 19136 HP0719 HP0720     TRUE 0.941 -7.000 0.000 NA   0.933
 19136 19137 HP0720 HP0721     TRUE 0.934 28.000 0.154 NA   0.975
 19137 19138 HP0721 HP0722   omp16 FALSE 0.002 432.000 0.000 NA   -0.016
 19141 19142 HP0725 HP0726 omp17   FALSE 0.003 287.000 0.000 NA   -0.034
 19142 19143 HP0726 HP0727     TRUE 0.852 -30.000 0.009 NA   0.699
 19143 19144 HP0727 HP0728     TRUE 0.428 94.000 0.005 0.007 N 0.260
 19144 19145 HP0728 HP0729     FALSE 0.220 42.000 0.004 NA   -0.108
 19145 19146 HP0729 HP0730     TRUE 0.949 9.000 0.455 NA   0.246
 19146 19147 HP0730 HP0731     FALSE 0.262 92.000 0.545 NA   -0.067
 19147 19148 HP0731 HP0732     TRUE 0.856 -10.000 0.250 NA   0.047
 19148 19149 HP0732 HP0733     FALSE 0.269 -51.000 0.000 NA   0.244
 19149 19150 HP0733 HP0734     FALSE 0.014 120.000 0.000 NA   -0.419
 19150 19151 HP0734 HP0735   gpt TRUE 0.975 2.000 0.017 1.000   0.530
 19151 19152 HP0735 HP0736 gpt serC TRUE 0.949 9.000 0.032 1.000   0.346
 19153 19154 HP0737 HP0738   ddlA TRUE 0.616 78.000 0.018 1.000 N 0.787
 19154 19155 HP0738 HP0739 ddlA   TRUE 0.986 0.000 0.046 NA   0.709
 19155 19156 HP0739 HP0740   murF TRUE 0.958 -13.000 0.129 NA   0.838
 19156 19157 HP0740 HP0741 murF   TRUE 0.920 10.000 0.061 1.000 N -0.177
 19157 19158 HP0741 HP0742   prsA FALSE 0.262 65.000 0.030 1.000 Y -0.163
 1937508 19159 HPt18 HP0743 tRNA-Met-2 mreB FALSE 0.032 -38.000 0.000 NA   NA
 19159 10712223 HP0743 HP0744 mreB   FALSE 0.064 23.000 0.000 NA   NA
 19160 19161 HP0745 HP0746     TRUE 0.463 -49.000 0.031 NA   -0.197
 19161 19162 HP0746 HP0747     TRUE 0.929 11.000 0.060 NA   0.352
 19162 19163 HP0747 HP0748   ftsE TRUE 0.967 -3.000 0.044 1.000   0.391
 19163 19164 HP0748 HP0749 ftsE ftsX TRUE 0.896 -13.000 0.431 1.000 N 0.155
 19164 19165 HP0749 HP0750 ftsX   TRUE 0.810 -7.000 0.045 NA Y 0.219
 19165 19166 HP0750 HP0751   flaG FALSE 0.174 93.000 0.043 NA N 0.310
 19166 19167 HP0751 HP0752 flaG fliD TRUE 0.944 17.000 0.092 NA Y 0.556
 19167 19168 HP0752 HP0753 fliD fliS TRUE 0.827 72.000 0.608 0.003 Y 0.396
 19168 19169 HP0753 HP0754 fliS   TRUE 0.940 -13.000 0.101 NA   0.634
 19169 19170 HP0754 HP0755   moeB FALSE 0.161 93.000 0.018 NA   0.316
 19170 19171 HP0755 HP0756 moeB   TRUE 0.799 2.000 0.000 NA   0.319
 19171 19172 HP0756 HP0757     TRUE 0.821 4.000 0.000 NA   0.377
 19172 19173 HP0757 HP0758     TRUE 0.451 127.000 0.048 1.000   0.816
 19173 19174 HP0758 HP0759     TRUE 0.807 63.000 0.098 1.000   0.867
 19175 19176 HP0760 HP0761     TRUE 0.478 103.000 0.059 1.000 N 0.622
 19177 19178 HP0762 HP0763   ftsY TRUE 0.900 9.000 0.011 NA   0.402
 19179 19180 HP0764 HP0765     TRUE 0.924 11.000 0.130 NA   0.215
 19180 19181 HP0765 HP0766     TRUE 0.646 11.000 0.000 NA   0.171
 19181 19182 HP0766 HP0767     FALSE 0.027 86.000 0.000 NA   -0.005
 19182 19183 HP0767 HP0768   moaA FALSE 0.018 104.000 0.000 NA   -0.308
 19184 19185 HP0769 HP0770 mobA flhB TRUE 0.881 -7.000 0.026 1.000 N 0.175
 19186 19187 HP0771 HP0772   amiA TRUE 0.943 19.000 0.084 NA   0.525
 19187 19188 HP0772 HP0773 amiA   TRUE 0.943 7.000 0.068 1.000   0.186
 19188 19189 HP0773 HP0774   tyrS TRUE 0.977 17.000 0.029 1.000   0.816
 19189 19190 HP0774 HP0775 tyrS spoT TRUE 0.955 24.000 0.222 1.000 N 0.598
 19190 19191 HP0775 HP0776 spoT   TRUE 0.808 -13.000 0.039 1.000 Y 0.211
 19191 19192 HP0776 HP0777   pyrH TRUE 0.906 12.000 0.033 1.000 N -0.034
 19192 19193 HP0777 HP0778 pyrH   FALSE 0.043 108.000 0.008 NA   -0.082
 19194 19195 HP0779 HP0780 acnB   TRUE 0.542 75.000 0.023 NA   0.716
 19195 19196 HP0780 HP0781     FALSE 0.004 271.000 0.000 NA   -0.548
 19196 19197 HP0781 HP0782     FALSE 0.217 94.000 0.129 NA   0.227
 19201 19202 HP0786 HP0787 secA   TRUE 0.954 -10.000 0.201 0.077 N 0.085
 19202 19203 HP0787 HP0788     FALSE 0.012 280.000 0.000 1.000   -0.443
 19204 19205 HP0789 HP0790   prrB FALSE 0.289 137.000 0.068 NA   0.691
 19205 19206 HP0790 HP0791 prrB cadA TRUE 0.624 42.000 0.107 1.000 N -0.181
 19206 19207 HP0791 HP0792 cadA   TRUE 0.844 25.000 0.014 1.000 N 0.440
 19207 19208 HP0792 HP0793   def TRUE 0.949 6.000 0.054 1.000 N 0.345
 19208 19209 HP0793 HP0794 def clpP TRUE 0.967 5.000 0.030 1.000 N 0.494
 19209 19210 HP0794 HP0795 clpP tig TRUE 0.973 18.000 0.351 1.000 Y 0.574
 19210 19211 HP0795 HP0796 tig omp18 FALSE 0.048 112.000 0.008 NA   0.094
 19211 19212 HP0796 HP0797 omp18   TRUE 0.741 29.000 0.444 NA   -0.226
 19212 19213 HP0797 HP0798   moaC TRUE 0.312 119.000 0.118 1.000   0.450
 19213 19214 HP0798 HP0799 moaC mog TRUE 0.976 9.000 0.028 0.004 Y 0.167
 19214 19215 HP0799 HP0800 mog moaE TRUE 0.970 13.000 0.026 0.004 Y -0.178
 19215 19216 HP0800 HP0801 moaE moaD TRUE 0.965 1.000 0.501 1.000 Y 0.068
 19216 19217 HP0801 HP0802 moaD ribA TRUE 0.342 73.000 0.012 1.000 Y 0.437
 19217 19218 HP0802 HP0803 ribA   FALSE 0.155 89.000 0.035 NA   0.154
 19218 19219 HP0803 HP0804     FALSE 0.212 89.000 0.103 NA   0.185
 19219 19220 HP0804 HP0805   lex2B FALSE 0.079 171.000 0.118 1.000 N -0.034
 19222 19223 HP0807 HP0808 fecA acpS FALSE 0.027 194.000 0.005 1.000 N 0.049
 19223 19224 HP0808 HP0809 acpS   TRUE 0.974 7.000 0.047 1.000 N 0.527
 19224 19225 HP0809 HP0810     TRUE 0.916 9.000 0.014 1.000 N 0.283
 19225 19226 HP0810 HP0811     TRUE 0.810 -21.000 0.032 NA   0.462
 19226 19227 HP0811 HP0812     FALSE 0.008 453.000 0.000 NA   0.401
 19228 19229 HP0813 HP0814   thiF TRUE 0.977 1.000 0.028 1.000   0.483
 19229 19230 HP0814 HP0815 thiF motA TRUE 0.852 16.000 0.020 1.000 N -0.202
 19230 19231 HP0815 HP0816 motA motB TRUE 0.929 3.000 0.119 1.000 Y -0.191
 19231 19232 HP0816 HP0817 motB   TRUE 0.952 -3.000 0.320 NA   0.180
 19232 19233 HP0817 HP0818   proWX TRUE 0.392 69.000 0.156 NA   0.337
 19233 19234 HP0818 HP0819 proWX proV TRUE 0.990 4.000 0.292 1.000 N 0.722
 19234 19235 HP0819 HP0820 proV   FALSE 0.056 174.000 0.123 NA   0.084
 19235 19236 HP0820 HP0821   uvrC TRUE 0.841 1.000 0.009 NA   0.116
 19236 19237 HP0821 HP0822 uvrC metL TRUE 0.978 11.000 0.008 1.000 N 0.922
 19237 19238 HP0822 HP0823 metL   TRUE 0.977 1.000 0.023 1.000 N 0.526
 19238 19239 HP0823 HP0824   trxA FALSE 0.215 89.000 0.027 1.000   -0.381
 19239 19240 HP0824 HP0825 trxA trxB TRUE 0.987 5.000 0.035 1.000   0.877
 19240 19241 HP0825 HP0826 trxB lex2B FALSE 0.013 216.000 0.000 1.000 N -0.270
 19242 19243 HP0827 HP0828   atpB FALSE 0.011 325.000 0.000 1.000   0.159
 19243 19244 HP0828 HP0829 atpB guaB FALSE 0.120 122.000 0.018 1.000 N 0.257
 19244 19245 HP0829 HP0830 guaB gatA TRUE 0.984 10.000 0.032 1.000 N 0.831
 19245 19246 HP0830 HP0831 gatA   FALSE 0.221 59.000 0.006 1.000 N -0.391
 19246 19247 HP0831 HP0832   speE TRUE 0.898 2.000 0.016 1.000 N -0.250
 19247 19248 HP0832 HP0833 speE   FALSE 0.150 92.000 0.068 NA   -0.104
 19249 19250 HP0834 HP0835 yphC hup FALSE 0.062 142.000 0.008 1.000   -0.587
 19250 1937509 HP0835 HPt19 hup tRNA-Arg-4 FALSE 0.006 73.000 0.000 NA   NA
 1937509 19251 HPt19 HP0836 tRNA-Arg-4   FALSE 0.000 456.000 0.000 NA   NA
 19251 19252 HP0836 HP0837     TRUE 0.681 -57.000 0.000 NA   0.607
 19252 19253 HP0837 HP0838     TRUE 0.835 20.000 0.156 NA   -0.030
 19253 19254 HP0838 HP0839   ompP1 TRUE 0.988 -3.000 0.421 NA   0.643
 19254 19255 HP0839 HP0840 ompP1   TRUE 0.982 4.000 0.061 NA   0.915
 19255 19256 HP0840 HP0841   dfp TRUE 0.952 -3.000 0.009 1.000   0.407
 19256 19257 HP0841 HP0842 dfp   TRUE 0.975 0.000 0.024 NA   0.542
 19258 19259 HP0843 HP0844 thiB thi TRUE 0.980 -7.000 0.063 0.002 Y 0.347
 19259 19260 HP0844 HP0845 thi thiM TRUE 0.992 -6.000 0.017 0.002 Y 0.699
 19260 19261 HP0845 HP0846 thiM hsdR TRUE 0.821 45.000 0.015 1.000 N 0.696
 19261 19262 HP0846 HP0847 hsdR   FALSE 0.053 291.000 0.000 NA   0.791
 19262 19263 HP0847 HP0848   hsdS TRUE 0.883 2.000 0.000 NA   0.438
 19263 19264 HP0848 HP0849 hsdS   FALSE 0.242 102.000 0.000 NA   0.651
 19264 19265 HP0849 HP0850   hsdM TRUE 0.869 -7.000 0.000 NA   0.498
 19267 19268 HP0852 HP0853   yheS TRUE 0.974 -3.000 0.007 NA   0.793
 19269 19270 HP0854 HP0855 guaC algI FALSE 0.003 146.000 0.000 NA N -0.141
 19270 19271 HP0855 HP0856 algI   TRUE 0.982 10.000 0.400 NA   0.615
 19272 19273 HP0857 HP0858 gmhA rfaE TRUE 0.970 -7.000 0.142 1.000 N 0.530
 19273 19274 HP0858 HP0859 rfaE rfaD TRUE 0.996 -3.000 0.096 0.009 Y 0.842
 19274 19275 HP0859 HP0860 rfaD   TRUE 0.977 9.000 0.093 1.000 N 0.525
 19275 19276 HP0860 HP0861     TRUE 0.950 -10.000 0.036 NA   0.676
 19276 19277 HP0861 HP0862     TRUE 0.919 -9.000 0.011 NA   0.549
 19277 19278 HP0862 HP0863     TRUE 0.820 5.000 0.008 NA   0.213
 19278 19279 HP0863 HP0864     TRUE 0.984 5.000 0.200 NA   0.754
 19279 19280 HP0864 HP0865   dut TRUE 0.978 -3.000 0.017 NA   0.738
 19280 19281 HP0865 HP0866 dut greA TRUE 0.844 -10.000 0.019 1.000 N 0.218
 19281 19282 HP0866 HP0867 greA lpxB TRUE 0.601 41.000 0.042 1.000 N -0.578
 19282 19283 HP0867 HP0868 lpxB   TRUE 0.864 0.000 0.013 NA   -0.063
 19283 19284 HP0868 HP0869   hypA TRUE 0.884 4.000 0.062 NA   -0.046
 19284 19285 HP0869 HP0870 hypA flgE TRUE 0.810 59.000 0.071 1.000   0.815
 19285 19286 HP0870 HP0871 flgE cdh FALSE 0.018 208.000 0.000 1.000 N 0.169
 19288 19289 HP0873 HP0874     TRUE 0.642 85.000 0.889 NA   0.549
 19289 19290 HP0874 HP0875     FALSE 0.252 145.000 0.444 NA   0.494
 19293 19294 HP0878 HP0879     TRUE 0.670 -49.000 0.000 NA   0.570
 19295 19296 HP0880 HP0881     TRUE 0.809 8.000 0.000 NA   0.377
 19296 19297 HP0881 HP0883   ruvA FALSE 0.003 690.000 0.000 NA   0.208
 19297 19298 HP0883 HP0884 ruvA   TRUE 0.858 26.000 0.023 NA   0.538
 19299 19300 HP0885 HP0886 mviN cysS TRUE 0.970 1.000 0.027 1.000   0.435
 19300 19301 HP0886 HP0887 cysS   FALSE 0.017 225.000 0.000 1.000   -0.554
 19302 19303 HP0888 HP0889 fecE fecD TRUE 0.994 0.000 1.000 1.000 Y 0.661
 19303 19304 HP0889 HP0890 fecD   TRUE 0.969 -7.000 0.035 1.000   0.582
 19306 19307 HP0892 HP0893     TRUE 0.968 14.000 0.400 NA   0.478
 19307 19308 HP0893 HP0894     TRUE 0.352 81.000 0.429 NA   0.262
 19308 19309 HP0894 HP0895     TRUE 0.867 -19.000 0.857 NA   0.254
 19309 19310 HP0895 HP0896   omp19 FALSE 0.003 611.000 0.000 NA   0.166
 19310 1937510 HP0896 HPt20 omp19 tRNA-Met-3 FALSE 0.001 194.000 0.000 NA   NA
 1937510 1937511 HPt20 HPt21 tRNA-Met-3 tRNA-Gln-1 FALSE 0.074 22.000 0.000 NA   NA
 19312 19313 HP0898 HP0899 hypD hypC TRUE 0.947 6.000 0.084 NA Y 0.470
 19313 19314 HP0899 HP0900 hypC hypB TRUE 0.991 0.000 0.463 NA Y 0.822
 19314 19315 HP0900 HP0901 hypB   FALSE 0.049 109.000 0.000 NA   0.303
 19315 19316 HP0901 HP0902     TRUE 0.948 11.000 0.000 NA   0.674
 19316 1937512 HP0902 HP0903m   ackA FALSE 0.087 98.000 0.045 NA   NA
 1937512 10712224 HP0903m HP0904 ackA   FALSE 0.099 18.000 0.000 NA   NA
 10712224 19318 HP0904 HP0905   pta FALSE 0.030 -42.000 0.000 NA   NA
 19319 19320 HP0906 HP0907   flgD TRUE 0.803 51.000 0.079 NA   0.830
 19320 19321 HP0907 HP0908 flgD flgE TRUE 0.977 -3.000 0.368 NA Y 0.517
 19321 19322 HP0908 HP0909 flgE   TRUE 0.516 52.000 0.571 NA   -0.146
 19322 19323 HP0909 HP0910     TRUE 0.954 -7.000 0.127 NA   0.505
 19323 19324 HP0910 HP0911   rep TRUE 0.965 4.000 0.048 0.063 Y 0.028
 19324 19325 HP0911 HP0912 rep omp20 FALSE 0.002 519.000 0.000 NA   -0.434
 19325 19326 HP0912 HP0913 omp20 omp21 TRUE 0.909 22.000 0.000 NA   0.925
 19327 19328 HP0914 HP0915   frpB FALSE 0.015 246.000 0.000 1.000   -0.412
 19328 19329 HP0915 HP0916 frpB frpB TRUE 0.995 0.000 0.000 0.005   0.816
 19331 19332 HP0918 HP0919   pyrAb TRUE 0.926 5.000 0.020 NA   0.425
 19332 19333 HP0919 HP0920 pyrAb   FALSE 0.109 99.000 0.011 NA   0.264
 19334 19335 HP0921 HP0922 gap   TRUE 0.403 81.000 0.368 1.000   0.078
 19335 19336 HP0922 HP0923   omp22 TRUE 0.518 52.000 0.500 NA   0.056
 19338 19339 HP0925 HP0926 recR   TRUE 0.980 -3.000 0.008 1.000   0.634
 19339 19340 HP0926 HP0927   htpX TRUE 0.771 -61.000 0.034 1.000   0.433
 19340 19341 HP0927 HP0928 htpX folE TRUE 0.966 1.000 0.102 1.000 N 0.325
 19341 19342 HP0928 HP0929 folE ispA TRUE 0.949 16.000 0.167 1.000 Y 0.422
 19342 19343 HP0929 HP0930 ispA surE TRUE 0.985 -3.000 0.041 1.000   0.598
 19343 19344 HP0930 HP0931 surE   TRUE 0.965 -3.000 0.015 NA   0.543
 19344 19345 HP0931 HP0932     FALSE 0.093 -84.000 0.000 NA   -0.142
 19345 19346 HP0932 HP0933     TRUE 0.851 2.000 0.023 NA   -0.089
 19346 19347 HP0933 HP0934     TRUE 0.984 3.000 0.139 1.000 N 0.577
 19347 19348 HP0934 HP0935     TRUE 0.905 11.000 0.015 1.000   0.083
 19349 19350 HP0936 HP0937 proP   FALSE 0.003 622.000 0.000 NA   0.244
 19350 19351 HP0937 HP0938     TRUE 0.416 80.000 0.182 NA   0.441
 19351 19352 HP0938 HP0939   yckJ TRUE 0.323 63.000 0.031 NA   0.325
 19352 19353 HP0939 HP0940 yckJ yckK TRUE 0.969 -16.000 0.594 0.037 Y 0.454
 19353 19354 HP0940 HP0941 yckK alr TRUE 0.317 68.000 0.056 1.000 N -0.011
 19354 19355 HP0941 HP0942 alr dagA TRUE 0.949 7.000 0.267 1.000 N 0.093
 19355 19356 HP0942 HP0943 dagA dadA TRUE 0.908 41.000 0.267 1.000 Y 0.690
 19356 19357 HP0943 HP0944 dadA   TRUE 0.973 22.000 0.667 NA N 0.884
 1937514 1937515 HPt23 HPt24 tRNA-Leu-1 tRNA-Cys-1 FALSE 0.006 77.000 0.000 NA   NA
 1937515 1937516 HPt24 HPt25 tRNA-Cys-1 tRNA-Ser-1 FALSE 0.014 51.000 0.000 NA   NA
 1937516 19359 HPt25 HP0946 tRNA-Ser-1   FALSE 0.002 133.000 0.000 NA   NA
 19359 19360 HP0946 HP0947     FALSE 0.003 315.000 0.000 NA   -0.788
 19361 19362 HP0948 HP0949     TRUE 0.961 10.000 0.013 NA   0.608
 19362 19363 HP0949 HP0950   accD TRUE 0.918 14.000 0.035 NA   0.400
 19364 19365 HP0951 HP0952     TRUE 0.867 11.000 0.047 NA   -0.167
 19366 19367 HP0953 HP0954     TRUE 0.763 65.000 1.000 NA   0.567
 19367 19368 HP0954 HP0955   lgt TRUE 0.909 -3.000 0.013 1.000 N -0.645
 19368 19369 HP0955 HP0956 lgt   TRUE 0.981 10.000 0.013 1.000 N 0.901
 19369 19370 HP0956 HP0957   kdtA TRUE 0.987 12.000 0.133 1.000 N 0.718
 19370 19371 HP0957 HP0958 kdtA   TRUE 0.926 1.000 0.122 NA   -0.240
 19371 19372 HP0958 HP0959     TRUE 0.952 10.000 0.342 NA   0.319
 19372 19373 HP0959 HP0960   glyQ TRUE 0.738 -13.000 0.041 NA   0.141
 19373 19374 HP0960 HP0961 glyQ   TRUE 0.973 14.000 0.013 1.000 N 0.687
 19374 19375 HP0961 HP0962   acpP FALSE 0.030 132.000 0.000 1.000 N -0.282
 19375 19376 HP0962 HP0963 acpP   TRUE 0.983 -7.000 0.200 1.000   0.691
 19376 19377 HP0963 HP0964     TRUE 0.990 -3.000 0.300 NA   0.970
 19377 19378 HP0964 HP0965     TRUE 0.873 -90.000 0.182 NA   0.890
 19378 19379 HP0965 HP0966     TRUE 0.998 -3.000 0.455 0.011   0.919
 19379 19380 HP0966 HP0967   vapD FALSE 0.020 221.000 0.000 1.000   0.121
 19380 19381 HP0967 HP0969 vapD czcA FALSE 0.009 367.000 0.000 1.000   0.050
 19381 19382 HP0969 HP0970 czcA nccB TRUE 0.990 -3.000 0.464 NA N 0.860
 19382 19383 HP0970 HP0971 nccB   TRUE 0.991 -3.000 0.857 NA Y 0.867
 19383 19384 HP0971 HP0972   glyS TRUE 0.373 50.000 0.013 1.000 N 0.083
 19385 19386 HP0973 HP0974   pgm TRUE 0.839 13.000 0.013 NA   0.209
 19386 19387 HP0974 HP0975 pgm gatC TRUE 0.974 15.000 0.009 1.000 N 0.867
 19389 19390 HP0977 HP0978   ftsA TRUE 0.961 16.000 0.184 1.000   0.421
 19390 19391 HP0978 HP0979 ftsA ftsZ TRUE 0.330 131.000 0.114 1.000 Y 0.615
 19391 19392 HP0979 HP0980 ftsZ   FALSE 0.005 1158.000 0.000 1.000   -0.326
 19392 19393 HP0980 HP0981   xseA TRUE 0.820 -82.000 0.011 1.000   0.638
 19393 1937517 HP0981 HPr03 xseA HPrrnC5S FALSE 0.024 -63.000 0.000 NA   NA
 1937517 19394 HPr03 HP0982 HPrrnC5S   FALSE 0.000 318.000 0.000 NA   NA
 19394 19395 HP0982 HP0983     FALSE 0.020 850.000 0.000 NA   0.623
 19395 19396 HP0983 HP0984     TRUE 0.316 80.000 0.182 NA   0.304
 19397 19398 HP0985 HP0986     FALSE 0.013 303.000 0.000 NA   0.421
 19401 19402 HP0989 HP0990 tnpB   FALSE 0.241 94.000 0.000 NA   0.589
 19403 19404 HP0991 HP0992     FALSE 0.048 147.000 0.000 NA   0.437
 19405 19406 HP0993 HP0994     TRUE 0.857 -28.000 0.085 NA   0.509
 19407 19408 HP0995 HP0996 xerD   FALSE 0.021 1148.000 0.000 NA   0.638
 19408 19409 HP0996 HP0997   tnpB FALSE 0.154 149.000 0.000 NA   0.877
 19410 19411 HP0998 HP0999 tnpA   FALSE 0.119 131.000 0.000 NA   0.583
 19411 19412 HP0999 HP1000     FALSE 0.055 266.000 0.000 NA   0.708
 19412 19413 HP1000 HP1001     TRUE 0.695 85.000 0.750 NA   0.701
 19413 19414 HP1001 HP1002     TRUE 0.916 44.000 0.875 NA   0.751
 19415 19416 HP1003 HP1004     TRUE 0.828 -24.000 0.000 NA   0.737
 19418 10712225 HP1006 HP1007 traG   FALSE 0.016 48.000 0.000 NA   NA
 1937518 19421 HPt26 HP1010 tRNA-Pro-1 ppk FALSE 0.004 97.000 0.000 NA   NA
 19421 19422 HP1010 HP1011 ppk pyrD TRUE 0.633 37.000 0.013 1.000 N 0.283
 19422 19423 HP1011 HP1012 pyrD pqqE TRUE 0.960 -3.000 0.048 1.000   0.291
 19423 19424 HP1012 HP1013 pqqE dapA TRUE 0.946 15.000 0.217 1.000   0.174
 19424 19425 HP1013 HP1014 dapA hdhA TRUE 0.991 -3.000 0.238 1.000 N 0.731
 19425 19426 HP1014 HP1015 hdhA   FALSE 0.161 112.000 0.132 NA   0.257
 19426 19427 HP1015 HP1016   pgsA TRUE 0.805 -66.000 0.009 NA   0.832
 19427 19428 HP1016 HP1017 pgsA rocE FALSE 0.273 98.000 0.003 0.052 N -0.442
 19428 19429 HP1017 HP1018 rocE   FALSE 0.076 48.000 0.000 NA   -0.119
 19429 19430 HP1018 HP1019   htrA FALSE 0.128 -49.000 0.000 NA   -0.210
 19430 19431 HP1019 HP1020 htrA   TRUE 0.949 22.000 0.011 1.000 N 0.726
 19431 19432 HP1020 HP1021     TRUE 0.961 22.000 0.027 1.000 N 0.802
 19432 19433 HP1021 HP1022     FALSE 0.099 256.000 0.000 0.061 N 0.480
 19435 19436 HP1024 HP1025 CbpA hspR TRUE 0.989 10.000 0.211 1.000 N 0.958
 19436 19437 HP1025 HP1026 hspR   TRUE 0.992 -3.000 0.013 0.005 N 0.541
 19437 19438 HP1026 HP1027   fur FALSE 0.114 160.000 0.009 1.000 N 0.467
 19439 19440 HP1028 HP1029     TRUE 0.987 -3.000 0.421 NA   0.620
 19440 19441 HP1029 HP1030   fliY TRUE 0.918 29.000 0.170 NA N 0.777
 19441 19442 HP1030 HP1031 fliY fliM TRUE 0.996 4.000 0.142 0.003 Y 0.907
 19442 19443 HP1031 HP1032 fliM fliA TRUE 0.982 -7.000 0.118 1.000 N 0.857
 19445 19446 HP1034 HP1035 ylxH flhF TRUE 0.993 -3.000 0.382 1.000 N 0.809
 19446 19447 HP1035 HP1036 flhF folK TRUE 0.967 -6.000 0.035 1.000 N 0.530
 19447 19448 HP1036 HP1037 folK   TRUE 0.927 -3.000 0.033 1.000 N -0.040
 19448 19449 HP1037 HP1038   aroQ TRUE 0.985 14.000 0.168 1.000 Y 0.966
 19449 19450 HP1038 HP1039 aroQ   FALSE 0.036 129.000 0.014 NA N -0.730
 19450 19451 HP1039 HP1040   rps15 FALSE 0.247 31.000 0.007 NA N -0.075
 19452 19453 HP1041 HP1042 flhA   TRUE 0.793 28.000 0.106 1.000   0.102
 19454 19455 HP1043 HP1044     FALSE 0.008 357.000 0.000 1.000   -0.273
 19457 19458 HP1046 HP1047   rbfA TRUE 0.931 -7.000 0.033 NA   0.486
 19458 19459 HP1047 HP1048 rbfA infB TRUE 0.988 0.000 0.530 1.000 Y 0.492
 19459 19460 HP1048 HP1049 infB   TRUE 0.987 -3.000 0.171 NA N 0.810
 19460 19461 HP1049 HP1050   thrB TRUE 0.566 -28.000 0.044 NA N 0.107
 19461 19462 HP1050 HP1051 thrB   TRUE 0.750 54.000 0.032 0.022 N 0.319
 19462 19463 HP1051 HP1052   envA TRUE 0.557 73.000 0.035 0.022 N 0.077
 19463 19464 HP1052 HP1053 envA   TRUE 0.921 -3.000 0.027 1.000 N -0.151
 19464 19465 HP1053 HP1054     TRUE 0.593 -63.000 0.030 NA N 0.413
 19465 19466 HP1054 HP1055     TRUE 0.772 64.000 0.273 NA   0.922
 19466 19467 HP1055 HP1056     TRUE 0.991 9.000 1.000 NA   0.928
 19467 19468 HP1056 HP1057     TRUE 0.960 -22.000 0.778 NA   0.902
 19469 19470 HP1058 HP1059 panB ruvB TRUE 0.963 0.000 0.027 1.000 N 0.351
 19470 19471 HP1059 HP1060 ruvB   FALSE 0.186 68.000 0.008 1.000 N -0.104
 19471 19472 HP1060 HP1061     TRUE 0.885 -7.000 0.535 NA Y -0.314
 19472 19473 HP1061 HP1062   queA TRUE 0.975 1.000 0.036 NA N 0.620
 19473 19474 HP1062 HP1063 queA gidB TRUE 0.983 -3.000 0.015 1.000 N 0.694
 19474 19475 HP1063 HP1064 gidB   FALSE 0.261 -57.000 0.002 NA   0.036
 19475 19476 HP1064 HP1065     TRUE 0.899 3.000 0.062 NA   0.073
 19476 1937519 HP1065 HPt27   tRNA-Ser-2 FALSE 0.020 44.000 0.000 NA   NA
 19478 19479 HP1067 HP1068 cheY prmA TRUE 0.987 1.000 0.029 1.000 N 0.727
 19479 19480 HP1068 HP1069 prmA ftsH TRUE 0.933 9.000 0.032 1.000 N 0.270
 19480 19481 HP1069 HP1070 ftsH   TRUE 0.918 3.000 0.109 NA   0.129
 19481 19482 HP1070 HP1071   pssA TRUE 0.742 -10.000 0.009 NA   0.281
 19482 19483 HP1071 HP1072 pssA copA TRUE 0.985 -3.000 0.013 1.000 N 0.895
 19483 19484 HP1072 HP1073 copA copP TRUE 0.993 1.000 0.875 0.001 Y -0.194
 19484 19485 HP1073 HP1074 copP   FALSE 0.185 145.000 0.250 NA   0.445
 19488 19489 HP1077 HP1078 nixA   FALSE 0.311 58.000 0.090 NA   -0.274
 19489 19490 HP1078 HP1079     TRUE 0.949 29.000 0.833 NA   0.699
 19490 19491 HP1079 HP1080     TRUE 0.415 111.000 0.054 1.000   0.549
 19491 19492 HP1080 HP1081     TRUE 0.983 4.000 0.072 NA   0.826
 19492 19493 HP1081 HP1082   msbA TRUE 0.918 -6.000 0.020 NA   0.439
 19493 19494 HP1082 HP1083 msbA   FALSE 0.197 92.000 0.020 1.000   -0.513
 19494 19495 HP1083 HP1084   pyrB FALSE 0.013 255.000 0.000 1.000   -0.053
 19496 19497 HP1085 HP1086   tly TRUE 0.973 0.000 0.016 NA   0.545
 19497 19498 HP1086 HP1087 tly ribC TRUE 0.872 -34.000 0.018 1.000 N 0.606
 19498 19499 HP1087 HP1088 ribC tktA TRUE 0.432 47.000 0.013 1.000 N 0.114
 19499 19500 HP1088 HP1089 tktA   TRUE 0.974 -3.000 0.169 1.000 N 0.403
 19500 19501 HP1089 HP1090   ftsK TRUE 0.986 -12.000 0.096 0.060 N 0.749
 19501 19502 HP1090 HP1091 ftsK kgtP FALSE 0.043 260.000 0.000 0.051 N -0.678
 19502 19503 HP1091 HP1092 kgtP flgG TRUE 0.720 53.000 0.049 1.000 N 0.536
 19508 19509 HP1097 HP1098     TRUE 0.443 21.000 0.000 NA   0.140
 19509 19510 HP1098 HP1099   eda TRUE 0.712 70.000 0.034 1.000   0.735
 19510 19511 HP1099 HP1100 eda   TRUE 0.983 19.000 0.523 1.000 Y 0.929
 19512 19513 HP1101 HP1102   devB TRUE 0.982 11.000 0.028 1.000 Y 0.835
 19513 19514 HP1102 HP1103 devB glk TRUE 0.962 -13.000 0.117 1.000 Y 0.771
 19514 19515 HP1103 HP1104 glk cad FALSE 0.253 162.000 0.061 1.000   0.582
 19519 19520 HP1108 HP1109     TRUE 0.995 16.000 0.205 0.003 Y 0.898
 19520 19521 HP1109 HP1110     TRUE 0.997 10.000 0.625 0.003 Y 0.897
 19521 19522 HP1110 HP1111     TRUE 0.996 13.000 0.268 0.003 Y 0.846
 19522 19523 HP1111 HP1112   purB FALSE 0.076 110.000 0.007 1.000 N -0.077
 19523 19524 HP1112 HP1113 purB omp24 FALSE 0.104 66.000 0.007 NA   -0.043
 19525 19526 HP1114 HP1115 uvrB   FALSE 0.182 70.000 0.003 NA   0.347
 19526 19527 HP1115 HP1116     TRUE 0.711 14.000 0.000 NA   0.277
 19527 19528 HP1116 HP1117     FALSE 0.003 410.000 0.000 NA   -0.643
 19528 19529 HP1117 HP1118   ggt FALSE 0.092 269.000 0.000 1.000   0.768
 19529 19530 HP1118 HP1119 ggt flgK FALSE 0.052 211.000 0.041 1.000 N 0.210
 19530 19531 HP1119 HP1120 flgK   TRUE 0.989 2.000 0.558 NA   0.708
 19531 19532 HP1120 HP1121     FALSE 0.133 129.000 0.207 NA   0.256
 19532 19533 HP1121 HP1122     FALSE 0.115 162.000 0.258 1.000   -0.043
 19533 19534 HP1122 HP1123   slyD FALSE 0.011 275.000 0.000 1.000   -0.102
 19534 19535 HP1123 HP1124 slyD   TRUE 0.968 -13.000 0.543 1.000   0.548
 19535 19536 HP1124 HP1125   omp18 TRUE 0.981 8.000 0.794 1.000   0.413
 19536 19537 HP1125 HP1126 omp18 tolB TRUE 0.505 67.000 0.702 1.000 N -0.250
 19537 19538 HP1126 HP1127 tolB   TRUE 0.985 -3.000 0.085 NA   0.743
 19538 19539 HP1127 HP1128     TRUE 0.412 -10.000 0.000 NA   0.089
 19539 19540 HP1128 HP1129   exbD TRUE 0.746 19.000 0.000 NA   0.416
 19540 19541 HP1129 HP1130 exbD exbB TRUE 0.941 53.000 0.944 0.036 Y 0.644
 19541 19542 HP1130 HP1131 exbB atpC TRUE 0.985 11.000 0.036 1.000 N 0.889
 19542 19543 HP1131 HP1132 atpC atpD TRUE 0.991 8.000 0.837 0.007 Y 0.340
 19543 19544 HP1132 HP1133 atpD atpG TRUE 0.979 23.000 0.724 0.007 Y 0.412
 19544 19545 HP1133 HP1134 atpG atpA TRUE 0.997 15.000 0.846 0.007 Y 0.913
 19545 19546 HP1134 HP1135 atpA atpH TRUE 0.994 21.000 0.864 0.007 Y 0.673
 19546 19547 HP1135 HP1136 atpH atpF TRUE 0.997 1.000 0.132 0.007 Y 0.788
 19547 19548 HP1136 HP1137 atpF atpF' TRUE 0.996 4.000 0.110 0.007 Y 0.836
 19548 19549 HP1137 HP1138 atpF'   TRUE 0.336 111.000 0.037 1.000 N 0.511
 19549 19550 HP1138 HP1139   soj TRUE 0.977 3.000 0.827 1.000 N 0.290
 19550 19551 HP1139 HP1140 soj birA TRUE 0.921 3.000 0.040 1.000 N -0.314
 19551 19552 HP1140 HP1141 birA fmt TRUE 0.936 -3.000 0.029 1.000 N 0.173
 19552 19553 HP1141 HP1142 fmt   TRUE 0.676 24.000 0.005 1.000   -0.324
 19553 19554 HP1142 HP1143     TRUE 0.776 40.000 0.041 NA   0.510
 407729 19556 HPr04 HP1145 HPrrnA16S   FALSE 0.000 750.000 0.000 NA   NA
 19556 19557 HP1145 HP1146     TRUE 0.416 60.000 0.286 NA   0.136
 19557 19558 HP1146 HP1147   rpl19 FALSE 0.006 520.000 0.000 NA   0.354
 19558 19559 HP1147 HP1148 rpl19 trmD TRUE 0.925 22.000 0.567 1.000 Y 0.319
 19559 19560 HP1148 HP1149 trmD   TRUE 0.993 1.000 0.672 1.000 Y 0.710
 19560 19561 HP1149 HP1150     TRUE 0.991 1.000 0.324 1.000   0.612
 19561 19562 HP1150 HP1151   rpS16 TRUE 0.986 17.000 0.385 1.000   0.742
 19562 19563 HP1151 HP1152 rpS16 ffh TRUE 0.398 74.000 0.361 1.000 N -0.399
 19563 19564 HP1152 HP1153 ffh valS TRUE 0.927 15.000 0.006 0.093 N -0.137
 19565 19566 HP1154 HP1155   murG TRUE 0.976 12.000 0.022 NA   0.862
 19566 19567 HP1155 HP1156 murG omp25 FALSE 0.206 108.000 0.020 NA   0.465
 19567 19568 HP1156 HP1157 omp25 omp26 TRUE 0.853 23.000 0.250 NA   0.264
 19568 19569 HP1157 HP1158 omp26 proC TRUE 0.839 14.000 0.038 NA   -0.073
 19569 19570 HP1158 HP1159 proC fic TRUE 0.846 28.000 0.151 1.000 N 0.353
 19571 19572 HP1160 HP1161   fldA FALSE 0.158 55.000 0.007 NA   -0.737
 19572 19573 HP1161 HP1162 fldA   FALSE 0.227 90.000 0.281 NA   -0.309
 19574 19575 HP1163 HP1164   trxB TRUE 0.678 25.000 0.043 NA N 0.205
 19577 19578 HP1166 HP1167 pgi   FALSE 0.009 306.000 0.000 1.000   -0.139
 19580 19581 HP1169 HP1170 glnP glnP TRUE 0.997 2.000 0.841 0.003 Y 0.586
 19581 19582 HP1170 HP1171 glnP glnQ TRUE 0.990 2.000 0.773 1.000 Y 0.598
 19582 19583 HP1171 HP1172 glnQ glnH TRUE 0.882 49.000 0.671 1.000 Y 0.667
 19583 19584 HP1172 HP1173 glnH   TRUE 0.410 122.000 0.098 NA   0.937
 19585 19586 HP1174 HP1175 gluP   TRUE 0.319 129.000 0.048 1.000   0.542
 19586 19587 HP1175 HP1176     FALSE 0.012 246.000 0.000 NA   0.336
 19587 19588 HP1176 HP1177   omp27 FALSE 0.054 101.000 0.000 NA   0.284
 19588 19589 HP1177 HP1178 omp27 deoD FALSE 0.006 456.000 0.000 NA   0.347
 19589 19590 HP1178 HP1179 deoD deoB TRUE 0.988 -3.000 0.031 1.000 N 0.867
 19590 19591 HP1179 HP1180 deoB nupC TRUE 0.984 12.000 0.062 1.000 N 0.718
 19591 1937520 HP1180 HPt28 nupC tRNA-Met-1 FALSE 0.003 109.000 0.000 NA   NA
 19592 19593 HP1181 HP1182     TRUE 0.844 19.000 0.029 NA N 0.378
 19594 19595 HP1183 HP1184 napA   TRUE 0.935 26.000 0.039 1.000 N 0.697
 19595 19596 HP1184 HP1185     FALSE 0.066 161.000 0.041 1.000 N 0.004
 19598 19599 HP1187 HP1188     FALSE 0.043 347.000 0.000 NA   0.754
 19599 19600 HP1188 HP1189   asd FALSE 0.002 560.000 0.000 NA   -0.008
 19600 19601 HP1189 HP1190 asd hisS TRUE 0.969 -13.000 0.011 0.040 N 0.625
 19605 19606 HP1194 HP1195   fusA FALSE 0.003 287.000 0.000 NA   -0.503
 19606 19607 HP1195 HP1196 fusA rps7 TRUE 0.991 12.000 0.579 1.000 Y 0.925
 19607 19608 HP1196 HP1197 rps7 rps12 TRUE 0.996 16.000 0.620 0.005 Y 0.846
 19608 19609 HP1197 HP1198 rps12 rpoB TRUE 0.315 89.000 0.122 1.000 N 0.231
 19609 19610 HP1198 HP1199 rpoB   FALSE 0.047 224.000 0.008 1.000 N 0.398
 19610 19611 HP1199 HP1200   rpl10 TRUE 0.971 46.000 0.884 0.027 Y 0.847
 19611 19612 HP1200 HP1201 rpl10 rpl1 TRUE 0.745 109.000 0.302 0.036 Y 0.682
 19612 19613 HP1201 HP1202 rpl1 rpl11 TRUE 0.969 45.000 0.838 0.036 Y 0.833
 19613 19614 HP1202 HP1203 rpl11 nusG TRUE 0.974 18.000 0.681 1.000 N 0.490
 19614 19615 HP1203 HP1203a nusG SecE TRUE 0.857 27.000 0.843 1.000   NA
 19615 1937521 HP1203a HPt29 SecE tRNA-Trp-1 FALSE 0.002 146.000 0.000 NA   NA
 1937521 19616 HPt29 HP1204 tRNA-Trp-1 rpL33 FALSE 0.026 40.000 0.000 NA   NA
 19616 19617 HP1204 HP1205 rpL33 tufB TRUE 0.686 36.000 0.099 1.000 Y 0.128
 19617 1937522 HP1205 HPt30 tufB tRNA-Thr-1 FALSE 0.002 130.000 0.000 NA   NA
 1937522 1937523 HPt30 HPt31 tRNA-Thr-1 tRNA-Gly-2 FALSE 0.032 34.000 0.000 NA   NA
 1937523 1937524 HPt31 HPt32 tRNA-Gly-2 tRNA-Tyr-1 FALSE 0.094 19.000 0.000 NA   NA
 1937524 1937525 HPt32 HPt33 tRNA-Tyr-1 tRNA-Thr-2 FALSE 0.034 31.000 0.000 NA   NA
 19619 19620 HP1207 HP1208     FALSE 0.050 201.000 0.030 1.000   -0.076
 19620 19621 HP1208 HP1209   iceA TRUE 0.962 9.000 0.571 1.000   -0.048
 19621 19622 HP1209 HP1210 iceA cysE FALSE 0.013 260.000 0.000 1.000   -0.432
 1937526 1937527 HPt34 HPt35 tRNA-Leu-2 tRNA-Leu-3 FALSE 0.010 59.000 0.000 NA   NA
 1937527 19624 HPt35 HP1212 tRNA-Leu-3 atpE FALSE 0.006 73.000 0.000 NA   NA
 19624 19625 HP1212 HP1213 atpE pnp FALSE 0.081 133.000 0.016 1.000   -0.460
 19625 19626 HP1213 HP1214 pnp   TRUE 0.896 3.000 0.028 NA   0.218
 19626 19627 HP1214 HP1215     TRUE 0.948 -3.000 0.165 NA   0.256
 19627 19628 HP1215 HP1216     TRUE 0.838 36.000 0.017 NA   0.677
 19628 19629 HP1216 HP1217     TRUE 0.985 3.000 0.116 NA   0.863
 19629 19630 HP1217 HP1218   purD TRUE 0.696 49.000 0.013 NA   0.656
 19632 19633 HP1220 HP1221 yhcG   TRUE 0.969 -6.000 0.008 1.000 N 0.686
 19633 19634 HP1221 HP1222   dld TRUE 0.465 41.000 0.008 1.000 N 0.086
 19635 19636 HP1223 HP1224   hemD TRUE 0.911 3.000 0.026 1.000 N 0.027
 19636 19637 HP1224 HP1225 hemD   TRUE 0.596 48.000 0.051 1.000 N 0.302
 19639 19640 HP1227 HP1228   invA FALSE 0.062 151.000 0.019 1.000 N -0.495
 19640 19641 HP1228 HP1229 invA lysC TRUE 0.988 2.000 0.051 1.000 N 0.873
 19641 19642 HP1229 HP1230 lysC   TRUE 0.985 -3.000 0.050 NA   0.876
 19642 19643 HP1230 HP1231   holB TRUE 0.985 -3.000 0.053 NA   0.922
 19643 19644 HP1231 HP1232 holB folP TRUE 0.990 -3.000 0.054 1.000   0.926
 19646 19647 HP1234 HP1235     TRUE 0.938 4.000 0.211 NA   0.242
 19647 19648 HP1235 HP1236     FALSE 0.242 79.000 0.174 NA   -0.433
 19648 19649 HP1236 HP1237   pyrAa TRUE 0.975 0.000 0.041 NA   0.505
 19649 19650 HP1237 HP1238 pyrAa aimE FALSE 0.181 166.000 0.008 0.007   0.130
 19651 19652 HP1239 HP1240     FALSE 0.013 113.000 0.000 NA   -0.194
 19652 19653 HP1240 HP1241   alaS TRUE 0.850 2.000 0.015 NA N 0.210
 19655 19656 HP1243 HP1244 omp28 rps18 FALSE 0.003 299.000 0.000 NA   -0.534
 19656 19657 HP1244 HP1245 rps18 ssb TRUE 0.906 23.000 0.034 1.000 N 0.465
 19657 19658 HP1245 HP1246 ssb rps6 TRUE 0.984 10.000 0.033 1.000 N 0.815
 19658 19659 HP1246 HP1247 rps6   FALSE 0.058 154.000 0.020 1.000 N -0.217
 19659 19660 HP1247 HP1248   vacB TRUE 0.812 -10.000 0.024 1.000 N -0.187
 19660 19661 HP1248 HP1249 vacB aroE TRUE 0.932 0.000 0.020 1.000 N -0.304
 19661 19662 HP1249 HP1250 aroE   TRUE 0.952 8.000 0.018 NA   0.521
 19662 19663 HP1250 HP1251   oppB TRUE 0.989 9.000 0.667 NA   0.831
 19663 19664 HP1251 HP1252 oppB oppA TRUE 0.990 -3.000 0.500 0.025   0.074
 19664 19665 HP1252 HP1253 oppA trpS TRUE 0.914 1.000 0.007 1.000 N 0.229
 19665 19666 HP1253 HP1254 trpS bioC TRUE 0.614 32.000 0.016 1.000   -0.128
 19667 19668 HP1255 HP1256 secG frr TRUE 0.986 0.000 0.008 1.000 N 0.936
 19668 19669 HP1256 HP1257 frr pyrE TRUE 0.983 4.000 0.026 1.000 N 0.759
 19669 19670 HP1257 HP1258 pyrE   TRUE 0.844 -10.000 0.071 NA   0.241
 19670 19671 HP1258 HP1259     FALSE 0.232 70.000 0.070 NA   0.010
 19671 19672 HP1259 HP1260     FALSE 0.182 102.000 0.061 1.000 N -0.375
 19672 19673 HP1260 HP1261     TRUE 0.996 0.000 0.571 0.004 Y 0.460
 19673 19674 HP1261 HP1262     TRUE 0.996 -3.000 0.703 0.004 Y 0.471
 19674 19675 HP1262 HP1263     TRUE 0.997 2.000 0.650 0.010 Y 0.854
 19675 19676 HP1263 HP1264     TRUE 0.992 -3.000 0.650 0.010   0.205
 19676 19677 HP1264 HP1265     TRUE 0.993 3.000 0.214 0.010   0.472
 19677 19678 HP1265 HP1266     TRUE 0.988 -3.000 0.222 0.010   -0.081
 19678 19679 HP1266 HP1267     TRUE 0.996 -3.000 0.065 0.010 Y 0.788
 19679 19680 HP1267 HP1268     TRUE 0.997 11.000 0.500 0.010 Y 0.809
 19680 19681 HP1268 HP1269     TRUE 0.994 -7.000 0.442 0.010 Y 0.697
 19681 19682 HP1269 HP1270     TRUE 0.996 -3.000 0.064 0.004 Y 0.688
 19682 19683 HP1270 HP1271     TRUE 0.987 3.000 0.056 0.010 Y 0.429
 19683 19684 HP1271 HP1272     TRUE 0.986 4.000 0.056 0.002 Y 0.332
 19684 19685 HP1272 HP1273     TRUE 0.993 -13.000 0.389 0.002 Y 0.890
 19685 19686 HP1273 HP1274   pflA TRUE 0.937 -10.000 0.586 1.000   0.155
 19686 19687 HP1274 HP1275 pflA algC TRUE 0.942 2.000 0.030 1.000   0.196
 19687 19688 HP1275 HP1276 algC   FALSE 0.010 146.000 0.000 NA   -0.461
 19689 19690 HP1277 HP1278 trpA trpB TRUE 0.994 -3.000 0.947 0.001 Y 0.217
 19690 19691 HP1278 HP1279 trpB trpC TRUE 0.987 2.000 0.221 0.002 Y 0.008
 19691 19692 HP1279 HP1280 trpC trpD TRUE 0.915 -7.000 0.293 1.000 Y -0.242
 19692 19693 HP1280 HP1281 trpD trpD TRUE 0.933 -3.000 0.083 1.000 Y -0.158
 19693 19694 HP1281 HP1282 trpD trpE TRUE 0.992 -3.000 0.703 0.001 Y 0.079
 19694 19695 HP1282 HP1283 trpE   FALSE 0.014 223.000 0.000 1.000 N 0.075
 19695 19696 HP1283 HP1284     TRUE 0.483 98.000 0.078 0.004 Y -0.042
 19696 19697 HP1284 HP1285     TRUE 0.426 70.000 0.068 1.000   0.264
 19700 19701 HP1288 HP1289     TRUE 0.971 24.000 0.800 NA   0.860
 19701 19702 HP1289 HP1290   pnuC FALSE 0.067 186.000 0.182 NA   0.207
 19702 19703 HP1290 HP1291 pnuC   TRUE 0.924 -12.000 0.021 1.000 Y 0.528
 19704 19705 HP1292 HP1293 rpl17 rpoA TRUE 0.996 0.000 0.873 1.000 N 0.892
 19705 19706 HP1293 HP1294 rpoA rps4 TRUE 0.992 12.000 0.549 1.000 N 0.953
 19706 19707 HP1294 HP1295 rps4 rps11 TRUE 0.996 10.000 0.509 0.035 Y 0.950
 19707 19708 HP1295 HP1296 rps11 rps13 TRUE 0.991 23.000 0.810 0.027 Y 0.828
 19708 19709 HP1296 HP1297 rps13 rpl36 TRUE 0.994 4.000 0.194 0.027   0.543
 19709 19710 HP1297 HP1298 rpl36 infA TRUE 0.318 79.000 0.104 1.000   -0.077
 19710 19711 HP1298 HP1299 infA map TRUE 0.949 0.000 0.051 1.000 Y 0.171
 19711 19712 HP1299 HP1300 map secY TRUE 0.990 0.000 0.026 1.000 N 0.902
 19712 19713 HP1300 HP1301 secY rplO TRUE 0.769 43.000 0.730 1.000 N 0.169
 19713 19714 HP1301 HP1302 rplO rps5 TRUE 0.984 20.000 0.148 0.035 Y 0.555
 19714 19715 HP1302 HP1303 rps5 rpl18 TRUE 0.997 -3.000 0.814 0.035 Y 0.738
 19715 19716 HP1303 HP1304 rpl18 rpl6 TRUE 0.997 11.000 0.815 0.027 Y 0.759
 19716 19717 HP1304 HP1305 rpl6 rps8 TRUE 0.997 11.000 0.808 0.027 Y 0.879
 19717 19718 HP1305 HP1306 rps8 rpS14 TRUE 0.996 10.000 0.473 0.027 Y 0.914
 19718 19719 HP1306 HP1307 rpS14 rpl5 TRUE 0.996 10.000 0.496 0.027 Y 0.806
 19719 19720 HP1307 HP1308 rpl5 rpl24 TRUE 0.997 13.000 0.758 0.027 Y 0.841
 19720 19721 HP1308 HP1309 rpl24 rpl14 TRUE 0.998 0.000 0.810 0.035 Y 0.854
 19721 19722 HP1309 HP1310 rpl14 rps17 TRUE 0.997 3.000 0.791 0.035 Y 0.880
 19722 19723 HP1310 HP1311 rps17 rpL29 TRUE 0.997 13.000 0.828 0.027 Y 0.774
 19723 19724 HP1311 HP1312 rpL29 rpl16 TRUE 0.990 -13.000 0.802 0.027 Y 0.696
 19724 19725 HP1312 HP1313 rpl16 rps3 TRUE 0.997 3.000 0.828 0.035 Y 0.961
 19725 19726 HP1313 HP1314 rps3 rpl22 TRUE 0.997 4.000 0.719 0.035 Y 0.873
 19726 19727 HP1314 HP1315 rpl22 rps19 TRUE 0.995 10.000 0.769 0.035 Y 0.612
 19727 19728 HP1315 HP1316 rps19 rpl2 TRUE 0.995 11.000 0.820 0.035 Y 0.599
 19728 19729 HP1316 HP1317 rpl2 rpl23 TRUE 0.995 17.000 0.849 0.022 Y 0.751
 19729 19730 HP1317 HP1318 rpl23 rpl4 TRUE 0.996 4.000 0.513 0.027 Y 0.849
 19730 19731 HP1318 HP1319 rpl4 rpl3 TRUE 0.977 35.000 0.361 0.027 Y 0.934
 19731 19732 HP1319 HP1320 rpl3 rps10 TRUE 0.976 37.000 0.467 0.035 Y 0.940
 19733 19734 HP1321 HP1322     FALSE 0.014 206.000 0.000 NA   0.296
 19735 19736 HP1323 HP1324 rnhB   TRUE 0.927 16.000 0.007 NA   0.567
 19736 19737 HP1324 HP1325   fumC TRUE 0.851 22.000 0.010 NA   0.472
 19738 19739 HP1326 HP1327     TRUE 0.959 5.000 0.625 NA   0.294
 19739 19740 HP1327 HP1328   czcA TRUE 0.983 -3.000 0.562 NA Y 0.558
 19740 19741 HP1328 HP1329 czcA czcA TRUE 0.990 1.000 0.526 NA N 0.740
 19742 19743 HP1330 HP1331     TRUE 0.959 -6.000 0.915 NA Y 0.409
 19743 19744 HP1331 HP1332   dnaJ TRUE 0.981 11.000 0.014 1.000 N 0.844
 19745 19746 HP1333 HP1334     FALSE 0.004 209.000 0.000 NA   -0.089
 19749 19750 HP1337 HP1338     TRUE 0.935 -16.000 0.014 1.000 N 0.806
 19751 19752 HP1339 HP1340 exbB exbD TRUE 0.998 -3.000 0.815 0.034 Y 0.921
 19752 19753 HP1340 HP1341 exbD tonB TRUE 0.976 -34.000 0.407 0.068 N 0.764
 19753 19754 HP1341 HP1342 tonB omp29 FALSE 0.054 191.000 0.182 NA   -0.439
 19755 19756 HP1343 HP1344   corA TRUE 0.925 7.000 0.134 1.000 Y -0.298
 19756 19757 HP1344 HP1345 corA   TRUE 0.962 16.000 0.011 1.000 N 0.635
 19757 19758 HP1345 HP1346   gap TRUE 0.981 16.000 0.020 0.005 Y 0.468
 19758 19759 HP1346 HP1347 gap ung FALSE 0.246 89.000 0.088 1.000 N -0.292
 19759 19760 HP1347 HP1348 ung plsC TRUE 0.952 -3.000 0.088 1.000 N 0.158
 19760 19761 HP1348 HP1349 plsC   TRUE 0.973 -13.000 0.846 NA   0.735
 19761 19762 HP1349 HP1350     TRUE 0.951 7.000 0.017 NA   0.521
 19762 19763 HP1350 HP1351     FALSE 0.019 210.000 0.000 1.000   -0.529
 19763 19764 HP1351 HP1352     TRUE 0.995 0.000 0.042 0.058   0.593
 19764 19765 HP1352 HP1353     FALSE 0.002 422.000 0.000 NA   -0.117
 19765 19766 HP1353 HP1354     TRUE 0.469 -130.000 0.000 NA   0.482
 19766 19767 HP1354 HP1355   nadC TRUE 0.891 25.000 0.000 1.000   0.646
 19767 19768 HP1355 HP1356 nadC nadA TRUE 0.998 0.000 0.198 0.004 Y 0.805
 19768 19769 HP1356 HP1357 nadA psd TRUE 0.952 -10.000 0.018 1.000 N 0.633
 19769 19770 HP1357 HP1358 psd   TRUE 0.946 -6.000 0.079 1.000   0.303
 19770 19771 HP1358 HP1359     TRUE 0.963 13.000 0.727 NA   0.359
 19771 19772 HP1359 HP1360   ubiA TRUE 0.554 -64.000 0.038 NA   0.284
 19772 19773 HP1360 HP1361 ubiA comE3 TRUE 0.399 29.000 0.009 NA   0.021
 19773 19774 HP1361 HP1362 comE3 dnaB FALSE 0.288 57.000 0.023 NA   0.223
 19774 19775 HP1362 HP1363 dnaB   TRUE 0.719 11.000 0.010 NA N -0.014
 19775 19776 HP1363 HP1364     TRUE 0.842 3.000 0.010 NA N 0.267
 19776 19777 HP1364 HP1365     TRUE 0.856 -25.000 0.769 1.000 Y 0.194
 19777 19778 HP1365 HP1366     TRUE 0.516 84.000 0.231 1.000   0.433
 19778 19779 HP1366 HP1367   mod TRUE 0.950 16.000 0.095 1.000   0.390
 19779 19780 HP1367 HP1368 mod mod TRUE 0.984 -13.000 0.095 0.010 Y 0.672
 19781 19782 HP1369m HP1371 mod   TRUE 0.963 11.000 0.037 0.057   NA
 19783 19784 HP1372 HP1373 mreC mreB TRUE 0.990 4.000 0.689 1.000 N 0.625
 19784 19785 HP1373 HP1374 mreB clpX TRUE 0.927 43.000 0.034 0.090 N 0.671
 19785 19786 HP1374 HP1375 clpX lpxA TRUE 0.980 2.000 0.006 1.000 N 0.856
 19786 19787 HP1375 HP1376 lpxA fabZ TRUE 0.975 4.000 0.013 1.000 N 0.638
 19787 19788 HP1376 HP1377 fabZ   FALSE 0.034 172.000 0.017 NA   0.174
 19789 19790 HP1378 HP1379 comL lon TRUE 0.623 42.000 0.062 1.000   -0.131
 19790 19791 HP1379 HP1380 lon tyrA TRUE 0.872 39.000 0.011 1.000 N 0.753
 19791 19792 HP1380 HP1381 tyrA   FALSE 0.146 52.000 0.003 NA   -0.327
 19795 19796 HP1384 HP1385     TRUE 0.961 -3.000 0.778 NA   0.054
 19797 19798 HP1386 HP1387 rpe dnaQ TRUE 0.639 -130.000 0.279 1.000 N -0.035
 19798 19799 HP1387 HP1388 dnaQ   FALSE 0.002 514.000 0.000 NA   -0.529
 19799 19800 HP1388 HP1389     TRUE 0.317 143.000 0.750 NA   0.521
 19801 19802 HP1390 HP1391     FALSE 0.004 253.000 0.000 NA   0.089
 19802 19803 HP1391 HP1392     TRUE 0.603 19.000 0.008 NA   -0.026
 19803 19804 HP1392 HP1393   recN TRUE 0.981 -3.000 0.035 NA N 0.778
 19804 19805 HP1393 HP1394 recN   TRUE 0.983 15.000 0.066 1.000 N 0.815
 19807 19808 HP1396 HP1397     TRUE 0.927 8.000 0.375 NA   -0.040
 19808 19809 HP1397 HP1398   ald FALSE 0.168 115.000 0.462 NA   0.053
 19810 19811 HP1399 HP1400 rocF fecA FALSE 0.005 537.000 0.000 1.000 N -0.425
 19812 19813 HP1401 HP1402   hsdR TRUE 0.979 0.000 0.411 NA   0.433
 19814 19815 HP1403 HP1404 hsdM hsdS TRUE 0.953 -3.000 0.000 0.057   0.008
 19815 19816 HP1404 HP1405 hsdS   FALSE 0.018 305.000 0.000 NA   0.463
 19816 19817 HP1405 HP1406   bioB FALSE 0.027 167.000 0.000 NA   0.384
 19817 19818 HP1406 HP1407 bioB   TRUE 0.961 0.000 0.017 1.000   0.334
 406583 1937528 HPr05 HPr06 HPrrnB5S HPrrnB23S FALSE 0.001 228.000 0.000 NA   NA
 19819 19820 HP1408 HP1409     TRUE 0.314 50.000 0.000 NA   0.427
 19820 19821 HP1409 HP1410     TRUE 0.811 41.000 0.714 NA   0.415
 19821 19822 HP1410 HP1411     TRUE 0.517 112.000 0.571 NA   0.683
 19822 19823 HP1411 HP1412     FALSE 0.207 116.000 0.400 NA   0.306
 19825 19826 HP1414 HP1415   miaA FALSE 0.070 101.000 0.009 NA   0.138
 19826 19827 HP1415 HP1416 miaA rfaJ TRUE 0.895 5.000 0.021 1.000 N -0.279
 19827 19828 HP1416   rfaJ HP1417m TRUE 0.718 10.000 0.000 1.000   NA
 19829 19830 HP1418 HP1419 murB fliQ TRUE 0.987 4.000 0.066 1.000 N 0.788
 19830 19831 HP1419 HP1420 fliQ fliI TRUE 0.987 11.000 0.145 1.000 Y 0.845
 19831 19832 HP1420 HP1421 fliI trbB TRUE 0.995 1.000 0.216 0.089 Y 0.693
 19832 19833 HP1421 HP1422 trbB ileS TRUE 0.976 17.000 0.242 0.089 N 0.378
 19833 19834 HP1422 HP1423 ileS   TRUE 0.690 25.000 0.013 1.000 Y 0.197
 19836 19837 HP1425 HP1426     FALSE 0.307 57.000 0.000 NA   0.465
 19837 19838 HP1426 HP1427   hpn FALSE 0.002 351.000 0.000 NA   -0.375
 19838 19839 HP1427 HP1428 hpn   FALSE 0.014 196.000 0.002 NA   -0.787
 19839 19840 HP1428 HP1429   kpsF TRUE 0.985 -3.000 0.009 1.000   0.815
 19840 19841 HP1429 HP1430 kpsF   TRUE 0.968 -16.000 0.222 1.000   0.948
 19841 19842 HP1430 HP1431   ksgA TRUE 0.908 38.000 0.028 1.000   0.765
 19844 19845 HP1433 HP1434   purU FALSE 0.150 109.000 0.024 1.000   0.076
 19845 19846 HP1434 HP1435 purU PspA TRUE 0.982 3.000 0.028 1.000 N 0.671
 19847 19848 HP1436 HP1437     FALSE 0.049 234.000 0.000 NA   0.590
 19848 19849 HP1437 HP1438     TRUE 0.959 9.000 0.000 NA   0.870
 19849 19850 HP1438 HP1439     TRUE 0.947 12.000 0.000 NA   0.673
 407730 19851 HPr07 HP1440 HPrrnB16S   FALSE 0.000 509.000 0.000 NA   NA
 19852 19853 HP1441 HP1442 ppi csrA TRUE 0.942 20.000 0.060 1.000 N 0.476
 19853 19854 HP1442 HP1443 csrA   TRUE 0.928 -3.000 0.036 1.000 N -0.145
 19854 19855 HP1443 HP1444   smpB TRUE 0.982 -3.000 0.028 1.000 N 0.615
 19855 19856 HP1444 HP1445 smpB exbB TRUE 0.940 3.000 0.014 1.000 N 0.382
 19856 19857 HP1445 HP1446 exbB exbD TRUE 0.995 11.000 0.452 0.034 Y 0.674
 19857 19858 HP1446 HP1447 exbD rpl34 FALSE 0.192 72.000 0.005 1.000   -0.401
 19858 19859 HP1447 HP1448 rpl34 rnpA TRUE 0.839 -40.000 0.787 1.000   0.074
 19859 19860 HP1448 HP1449 rnpA   TRUE 0.882 -13.000 0.540 NA   0.250
 19860 19861 HP1449 HP1450     TRUE 0.986 6.000 0.461 NA   0.691
 19861 19862 HP1450 HP1451     TRUE 0.988 0.000 0.061 NA   0.773
 19862 19863 HP1451 HP1452   tdhF TRUE 0.888 -40.000 0.049 NA   0.796
 19863 19864 HP1452 HP1453 tdhF   FALSE 0.006 204.000 0.000 NA   -0.639
 19865 19866 HP1454 HP1455     TRUE 0.990 10.000 0.889 NA   0.756
 19866 19867 HP1455 HP1456   lpp20 TRUE 0.948 -43.000 1.000 NA   0.888
 19867 19868 HP1456 HP1457 lpp20   TRUE 0.946 24.000 0.063 NA   0.866
 19868 19869 HP1457 HP1458     FALSE 0.007 370.000 0.000 NA   0.322
 19869 19870 HP1458 HP1459     TRUE 0.798 55.000 0.206 1.000 N 0.626
 19870 19871 HP1459 HP1460   dnaE TRUE 0.928 -18.000 0.010 1.000 N 0.866
 19873 19874 HP1462 HP1463     TRUE 0.524 88.000 0.027 NA   0.811
 19874 19875 HP1463 HP1464     TRUE 0.985 3.000 0.120 NA   0.804
 19875 19876 HP1464 HP1465     TRUE 0.951 -15.000 0.912 NA Y 0.613
 19876 19877 HP1465 HP1466     TRUE 0.991 0.000 0.912 NA Y 0.672
 19879 19880 HP1468 HP1469 ilvE omp31 TRUE 0.722 52.000 0.060 NA   0.629
 19880 19881 HP1469 HP1470 omp31 polA FALSE 0.085 115.000 0.008 NA   0.354
 19881 19882 HP1470 HP1471 polA   TRUE 0.574 68.000 0.005 0.056   0.367
 19882 19883 HP1471 HP1472   mod TRUE 0.705 66.000 0.235 0.056   0.163
 19883 19884 HP1472 HP1473 mod   TRUE 0.746 31.000 0.091 1.000   0.049
 19884 19885 HP1473 HP1474   tmk TRUE 0.859 -12.000 0.014 1.000   0.325
 19885 19886 HP1474 HP1475 tmk kdtB TRUE 0.921 2.000 0.034 1.000 N -0.253
 19886 19887 HP1475 HP1476 kdtB   TRUE 0.967 0.000 0.032 1.000 Y 0.421
 19887 19888 HP1476 HP1477     TRUE 0.913 10.000 0.191 NA N 0.157
 19888 19889 HP1477 HP1478   uvrD TRUE 0.939 -3.000 0.036 NA N 0.407
 19889 19890 HP1478 HP1479 uvrD   TRUE 0.921 -3.000 0.017 1.000   -0.100
 19890 19891 HP1479 HP1480   serS TRUE 0.872 10.000 0.005 1.000   -0.607
 19891 19892 HP1480 HP1481 serS   TRUE 0.984 1.000 0.010 1.000   0.690
 19892 19893 HP1481 HP1482     TRUE 0.926 4.000 0.032 1.000   -0.470
 19893 19894 HP1482 HP1483   gerC2 TRUE 0.857 10.000 0.008 1.000 N -0.458
 19894 19895 HP1483 HP1484 gerC2   TRUE 0.814 27.000 0.009 NA   0.539
 19895 19896 HP1484 HP1485     TRUE 0.834 11.000 0.024 NA   -0.082
 19896 19897 HP1485 HP1486     TRUE 0.674 -13.000 0.024 NA   -0.498
 19897 19898 HP1486 HP1487     TRUE 0.991 -3.000 0.743 NA   0.718
 19898 19899 HP1487 HP1488     TRUE 0.961 12.000 0.729 NA   0.308
 19899 19900 HP1488 HP1489     TRUE 0.959 12.000 0.464 1.000 N 0.155
 19900 19901 HP1489 HP1490     TRUE 0.982 -3.000 0.082 1.000   0.495
 19901 19902 HP1490 HP1491     FALSE 0.212 104.000 0.099 1.000   -0.129
 19903 19904 HP1492 HP1493     TRUE 0.977 12.000 0.107 1.000   0.488
 19904 19905 HP1493 HP1494   murE TRUE 0.988 4.000 0.057 1.000   0.811
 19905 19906 HP1494 HP1495 murE tal TRUE 0.971 4.000 0.016 0.038 N 0.272
 19906 19907 HP1495 HP1496 tal ctc TRUE 0.362 55.000 0.017 1.000 N 0.179
 19907 19908 HP1496 HP1497 ctc pth TRUE 0.988 10.000 0.496 0.040 Y 0.393
 19908 19909 HP1497 HP1498 pth   TRUE 0.531 55.000 0.031 1.000   0.352
 19909 19910 HP1498 HP1499     FALSE 0.127 115.000 0.005 1.000   0.321
 19911 19912 HP1500 HP1501   omp32 FALSE 0.015 162.000 0.000 NA   0.218
 19914 19915 HP1503 HP1504 copA   TRUE 0.784 26.000 0.023 1.000   0.251
 19915 19916 HP1504 HP1505   ribG TRUE 0.943 -18.000 0.026 1.000   0.766
 19916 19917 HP1505 HP1506 ribG gltS TRUE 0.992 -3.000 0.219 1.000 N 0.808
 19920 19921 HP1509 HP1510     TRUE 0.973 -3.000 0.096 1.000   0.394
 19921 19922 HP1510 HP1511     TRUE 0.847 -16.000 0.049 NA   0.461
 19922 19923 HP1511 HP1512   frpB FALSE 0.143 154.000 1.000 NA   0.098
 19923 19924 HP1512 HP1513 frpB   FALSE 0.015 227.000 0.000 1.000   -0.247
 19924 19925 HP1513 HP1514   nusA FALSE 0.149 102.000 0.007 1.000 N 0.312
 19925 19926 HP1514 HP1515 nusA   FALSE 0.009 200.000 0.000 NA   0.174
 19927 19928 HP1516 HP1517     TRUE 0.777 1.000 0.000 NA   0.249
 19928 19929 HP1517 HP1518     TRUE 0.961 2.000 0.000 NA   0.752
 19929 19930 HP1518 HP1519     FALSE 0.064 131.000 0.000 NA   0.453
 19930 19931 HP1519 HP1520     FALSE 0.147 110.000 0.000 NA   0.522
 19931 19932 HP1520 HP1521   res FALSE 0.217 134.000 0.125 NA   0.503
 19932 10712226 HP1521 HP1522 res   FALSE 0.173 3.000 0.000 NA   NA
 10712226 19933 HP1522 HP1523   recG FALSE 0.014 50.000 0.000 NA   NA
 19934 19935 HP1524 HP1525     TRUE 0.974 4.000 1.000 NA   0.391
 19940 19941 HP1530 HP1531 punB   TRUE 0.809 43.000 0.172 NA   0.532
 19941 19942 HP1531 HP1532   glmS TRUE 0.947 1.000 0.167 NA   0.220
 19942 19943 HP1532 HP1533 glmS   TRUE 0.891 -46.000 0.018 1.000 N 0.768
 19948 19949 HP1538 HP1539 fbcH fbcH TRUE 0.997 -3.000 0.103 0.002 Y 0.891
 19949 19950 HP1539 HP1540 fbcH fbcF TRUE 0.995 11.000 0.093 0.002 Y 0.645
 19950 19951 HP1540 HP1541 fbcF trcF FALSE 0.067 125.000 0.008 1.000 N -0.561
 19951 19952 HP1541 HP1542 trcF   TRUE 0.806 4.000 0.023 NA N -0.186
 19952 19953 HP1542 HP1543   tagE TRUE 0.583 -81.000 0.244 NA Y 0.283
 19953 19954 HP1543 HP1544 tagE tagE TRUE 0.998 9.000 0.909 0.007   0.678
 19954 19955 HP1544 HP1545 tagE folC TRUE 0.993 0.000 0.071 1.000   0.895
 19955 19956 HP1545 HP1546 folC   TRUE 0.966 -10.000 0.084 NA   0.853
 19956 19957 HP1546 HP1547   leuS TRUE 0.886 -3.000 0.031 NA   0.027
 19957 19958 HP1547 HP1548 leuS   TRUE 0.828 10.000 0.021 NA   -0.207
 19958 19959 HP1548 HP1549   secF TRUE 0.980 10.000 0.667 NA   0.508
 19959 19960 HP1549 HP1550 secF secD TRUE 0.997 9.000 0.436 0.001 Y 0.801
 19960 19961 HP1550 HP1551 secD   TRUE 0.870 -3.000 0.068 NA Y -0.210
 19961 19962 HP1551 HP1552   nhaA FALSE 0.177 48.000 0.009 NA N -0.008
 19962 19963 HP1552 HP1553 nhaA   TRUE 0.842 24.000 0.026 1.000 N 0.360
 19964 19965 HP1554 HP1555 rps2 tsf TRUE 0.995 0.000 0.748 1.000 Y 0.892
 19966 19967 HP1556 HP1557 ftsI fliE FALSE 0.116 156.000 0.303 1.000 N -0.067
 19967 19968 HP1557 HP1558 fliE flgC TRUE 0.385 128.000 0.271 0.006 Y 0.023
 19968 19969 HP1558 HP1559 flgC flgB TRUE 0.997 13.000 0.804 0.006 Y 0.723
 19971 19972 HP1561 HP1562 ceuE ceuE TRUE 0.640 201.000 0.375 0.001 Y 0.917
 19973 19974 HP1563 HP1564 tsaA   FALSE 0.028 140.000 0.016 NA N -0.188
 19975 19976 HP1565 HP1566 pbp2   TRUE 0.601 -19.000 0.027 NA   0.069
 19976 19977 HP1566 HP1567     TRUE 0.754 13.000 0.010 NA   -0.032
 19977 19978 HP1567 HP1568     TRUE 0.978 -3.000 0.041 NA   0.635
 19978 19979 HP1568 HP1569     TRUE 0.909 0.000 0.038 NA   -0.066
 19979 19980 HP1569 HP1570     TRUE 0.932 -25.000 0.471 NA   0.636
 19980 19981 HP1570 HP1571   rlpA TRUE 0.983 -3.000 0.042 NA   0.761
 19981 19982 HP1571 HP1572 rlpA   TRUE 0.969 0.000 0.062 NA   0.443
 19982 19983 HP1572 HP1573     TRUE 0.393 88.000 0.015 NA   0.606
 19984 19985 HP1574 HP1575 ribC   TRUE 0.911 1.000 0.009 1.000   0.048
 19985 19986 HP1575 HP1576   abc TRUE 0.965 22.000 0.066 1.000   0.663
 19986 19987 HP1576 HP1577 abc yaeE TRUE 0.990 2.000 0.274 1.000 Y 0.836
 19988 19989 HP1578 HP1579     TRUE 0.541 49.000 0.500 NA   -0.145
 19989 19990 HP1579 HP1580     TRUE 0.989 10.000 0.700 NA   0.755
 19990 19991 HP1580 HP1581   llm TRUE 0.936 -69.000 0.538 1.000 N 0.897
 19992 19993 HP1582 HP1583 pdxJ pdxA TRUE 0.996 2.000 0.048 0.001 Y 0.937
 19993 19994 HP1583 HP1584 pdxA gcp FALSE 0.217 65.000 0.007 1.000 N 0.108
 19994 19995 HP1584 HP1585 gcp flgG FALSE 0.027 180.000 0.004 1.000 N -0.062
 19995 19996 HP1585 HP1586 flgG   FALSE 0.038 72.000 0.000 NA   -0.338
 19997 19998 HP1587 HP1588     FALSE 0.001 685.000 0.000 NA   -0.106
 19998 19999 HP1588 HP1589     FALSE 0.064 267.000 0.000 NA   0.849
 19999 20000 HP1589 HP1590     TRUE 0.884 1.000 0.000 NA   0.422
 20000 18425 HP1590 HP0001     FALSE 0.003 284.000 0.000 NA   0.030