MicrobesOnline Operon Predictions for Clostridium difficile R20291

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 7751907 7751908 CDR20291_3551 CDR20291_3552 rsbW sigB TRUE 0.999 0.000 0.838 1.000 N NA
 7751908 7751909 CDR20291_3552 CDR20291_r27 sigB 16SrRNA TRUE 0.404 86.000 0.000 NA   NA
 7751909 7751910 CDR20291_r27 CDR20291_r18 16SrRNA 23SrRNA FALSE 0.044 253.000 0.000 NA   NA
 7751910 7751911 CDR20291_r18 CDR20291_r19 23SrRNA 5SrRNA TRUE 0.511 62.000 0.000 NA   NA
 7751911 7751912 CDR20291_r19 CDR20291_0001 5SrRNA   FALSE 0.221 127.000 0.000 NA   NA
 7751912 7751913 CDR20291_0001 CDR20291_0002     TRUE 0.884 12.000 0.000 NA   NA
 7751913 7751914 CDR20291_0002 CDR20291_0003   serS1 FALSE 0.009 458.000 0.000 NA N NA
 7751914 7751915 CDR20291_0003 CDR20291_0004 serS1   FALSE 0.111 320.000 0.000 1.000 Y NA
 7751915 10864266 CDR20291_0004 CDR20291_t11     TRUE 0.922 2.000 0.000 NA   NA
 10864266 7751916 CDR20291_t11 CDR20291_0005   dnaH FALSE 0.016 378.000 0.000 NA   NA
 7751916 7751917 CDR20291_0005 CDR20291_0006 dnaH   TRUE 0.935 59.000 0.100 NA   NA
 7751917 7751918 CDR20291_0006 CDR20291_0007   recD TRUE 0.998 13.000 0.604 NA   NA
 7751920 7751921 CDR20291_r01 CDR20291_r02 16SrRNA 23SrRNA TRUE 0.356 97.000 0.000 NA   NA
 7751921 7751922 CDR20291_r02 CDR20291_r03 23SrRNA 5SrRNA FALSE 0.214 129.000 0.000 NA   NA
 7751922 10864267 CDR20291_r03 CDR20291_t22 5SrRNA   TRUE 0.899 8.000 0.000 NA   NA
 10864267 10864268 CDR20291_t22 CDR20291_t44     FALSE 0.295 108.000 0.000 NA   NA
 10864268 10864269 CDR20291_t44 CDR20291_t55     TRUE 0.899 8.000 0.000 NA   NA
 10864269 10864270 CDR20291_t55 CDR20291_t62     TRUE 0.892 10.000 0.000 NA   NA
 10864270 10864271 CDR20291_t62 CDR20291_t63     TRUE 0.904 6.000 0.000 NA   NA
 10864271 10864272 CDR20291_t63 CDR20291_t64     TRUE 0.904 6.000 0.000 NA   NA
 10864272 10864273 CDR20291_t64 CDR20291_t65     TRUE 0.892 10.000 0.000 NA   NA
 10864273 10864274 CDR20291_t65 CDR20291_t01     TRUE 0.867 15.000 0.000 NA   NA
 10864274 10864275 CDR20291_t01 CDR20291_t02     TRUE 0.896 9.000 0.000 NA   NA
 10864275 10864276 CDR20291_t02 CDR20291_t03     TRUE 0.770 30.000 0.000 NA   NA
 10864276 10864277 CDR20291_t03 CDR20291_t04     TRUE 0.899 8.000 0.000 NA   NA
 10864277 10864278 CDR20291_t04 CDR20291_t05     TRUE 0.390 89.000 0.000 NA   NA
 10864278 10864279 CDR20291_t05 CDR20291_t06     TRUE 0.910 4.000 0.000 NA   NA
 10864279 10864280 CDR20291_t06 CDR20291_t07     TRUE 0.902 7.000 0.000 NA   NA
 10864280 10864281 CDR20291_t07 CDR20291_t08     TRUE 0.884 12.000 0.000 NA   NA
 10864281 10864282 CDR20291_t08 CDR20291_t09     TRUE 0.842 24.000 0.000 NA   NA
 10864282 10864283 CDR20291_t09 CDR20291_t10     TRUE 0.899 8.000 0.000 NA   NA
 10864283 10864284 CDR20291_t10 CDR20291_t12     TRUE 0.896 9.000 0.000 NA   NA
 10864284 10864285 CDR20291_t12 CDR20291_t13     TRUE 0.899 8.000 0.000 NA   NA
 10864285 10864286 CDR20291_t13 CDR20291_t14     TRUE 0.902 7.000 0.000 NA   NA
 10864286 10864287 CDR20291_t14 CDR20291_t15     TRUE 0.904 6.000 0.000 NA   NA
 10864287 10864288 CDR20291_t15 CDR20291_t16     TRUE 0.863 16.000 0.000 NA   NA
 10864288 10864289 CDR20291_t16 CDR20291_t17     TRUE 0.899 8.000 0.000 NA   NA
 10864289 10864290 CDR20291_t17 CDR20291_t18     TRUE 0.892 10.000 0.000 NA   NA
 10864290 10864291 CDR20291_t18 CDR20291_t19     TRUE 0.904 6.000 0.000 NA   NA
 10864291 10864292 CDR20291_t19 CDR20291_t20     TRUE 0.904 6.000 0.000 NA   NA
 10864292 10864293 CDR20291_t20 CDR20291_t21     TRUE 0.892 10.000 0.000 NA   NA
 10864293 10864294 CDR20291_t21 CDR20291_t23     TRUE 0.867 15.000 0.000 NA   NA
 10864294 10864295 CDR20291_t23 CDR20291_t24     TRUE 0.892 10.000 0.000 NA   NA
 10864295 10864296 CDR20291_t24 CDR20291_t25     TRUE 0.842 24.000 0.000 NA   NA
 10864296 10864297 CDR20291_t25 CDR20291_t26     TRUE 0.832 25.000 0.000 NA   NA
 10864297 10864298 CDR20291_t26 CDR20291_t27     TRUE 0.892 10.000 0.000 NA   NA
 10864298 10864299 CDR20291_t27 CDR20291_t28     TRUE 0.896 9.000 0.000 NA   NA
 10864299 10864300 CDR20291_t28 CDR20291_t29     TRUE 0.915 3.000 0.000 NA   NA
 10864300 10864301 CDR20291_t29 CDR20291_t30     TRUE 0.910 4.000 0.000 NA   NA
 10864301 10864302 CDR20291_t30 CDR20291_t31     TRUE 0.902 7.000 0.000 NA   NA
 10864302 10864303 CDR20291_t31 CDR20291_t32     TRUE 0.884 12.000 0.000 NA   NA
 10864303 10864304 CDR20291_t32 CDR20291_t34     TRUE 0.863 18.000 0.000 NA   NA
 10864304 10864305 CDR20291_t34 CDR20291_t35     TRUE 0.896 9.000 0.000 NA   NA
 10864305 10864306 CDR20291_t35 CDR20291_t36     TRUE 0.899 8.000 0.000 NA   NA
 10864306 10864307 CDR20291_t36 CDR20291_t37     TRUE 0.899 8.000 0.000 NA   NA
 10864307 10864308 CDR20291_t37 CDR20291_t38     TRUE 0.878 13.000 0.000 NA   NA
 10864308 7751923 CDR20291_t38 CDR20291_0009     TRUE 0.454 75.000 0.000 NA   NA
 7751923 7751924 CDR20291_0009 CDR20291_0010   pyc FALSE 0.026 309.000 0.000 NA   NA
 7751924 7751925 CDR20291_0010 CDR20291_0011 pyc   FALSE 0.049 242.000 0.000 1.000 N NA
 7751925 7751926 CDR20291_0011 CDR20291_0012   ctsR FALSE 0.009 453.000 0.000 NA N NA
 7751926 7751927 CDR20291_0012 CDR20291_0013 ctsR   TRUE 0.999 7.000 0.681 NA   NA
 7751927 7751928 CDR20291_0013 CDR20291_0014     TRUE 0.999 16.000 0.848 1.000   NA
 7751928 7751929 CDR20291_0014 CDR20291_0015   clpC TRUE 0.633 185.000 0.129 1.000 N NA
 7751929 7751930 CDR20291_0015 CDR20291_0016 clpC radA TRUE 0.756 180.000 0.009 0.023 Y NA
 7751930 7751931 CDR20291_0016 CDR20291_0017 radA   TRUE 0.994 3.000 0.126 NA   NA
 7751931 7751932 CDR20291_0017 CDR20291_0018     TRUE 0.886 89.000 0.088 NA   NA
 7751932 7751933 CDR20291_0018 CDR20291_0019     FALSE 0.214 129.000 0.000 NA   NA
 7751935 7751936 CDR20291_0021 CDR20291_0022     TRUE 0.999 22.000 1.000 0.003   NA
 7751936 7751937 CDR20291_0022 CDR20291_0023     TRUE 0.979 97.000 0.333 1.000 Y NA
 7751937 7751938 CDR20291_0023 CDR20291_0024     FALSE 0.012 445.000 0.000 1.000 N NA
 7751938 7751939 CDR20291_0024 CDR20291_0025   acoA TRUE 0.751 32.000 0.000 1.000 N NA
 7751939 7751940 CDR20291_0025 CDR20291_0026 acoA acoB TRUE 0.999 25.000 0.769 0.001 Y NA
 7751940 7751941 CDR20291_0026 CDR20291_0027 acoB acoC TRUE 0.982 13.000 0.000 0.059 Y NA
 7751941 7751942 CDR20291_0027 CDR20291_0028 acoC acoL TRUE 0.433 167.000 0.000 1.000 Y NA
 7751942 7751943 CDR20291_0028 CDR20291_0029 acoL   FALSE 0.013 418.000 0.000 1.000 N NA
 7751943 7751944 CDR20291_0029 CDR20291_0030     TRUE 0.978 -22.000 0.000 0.036 N NA
 7751944 7751945 CDR20291_0030 CDR20291_0031     TRUE 0.749 113.000 0.000 0.031 Y NA
 7751945 7751946 CDR20291_0031 CDR20291_0032     TRUE 0.985 62.000 0.148 0.051 Y NA
 7751946 7751947 CDR20291_0032 CDR20291_0033     TRUE 0.972 35.000 0.111 NA   NA
 7751947 7751948 CDR20291_0033 CDR20291_0034     FALSE 0.122 172.000 0.000 NA   NA
 7751948 7751949 CDR20291_0034 CDR20291_0035     FALSE 0.120 174.000 0.000 1.000 N NA
 7751949 7751950 CDR20291_0035 CDR20291_0036   ispD FALSE 0.050 241.000 0.000 1.000 N NA
 7751950 7751951 CDR20291_0036 CDR20291_0037 ispD ispF TRUE 0.997 -3.000 0.041 1.000 Y NA
 7751951 7751952 CDR20291_0037 CDR20291_0038 ispF proS FALSE 0.080 367.000 0.004 1.000 N NA
 7751952 7751953 CDR20291_0038 CDR20291_0039 proS   TRUE 0.986 35.000 0.006 0.001 Y NA
 7751953 7751954 CDR20291_0039 CDR20291_0040   gltX FALSE 0.057 440.000 0.000 1.000 Y NA
 7751954 7751955 CDR20291_0040 CDR20291_0041 gltX cysS FALSE 0.146 515.000 0.021 1.000 Y NA
 7751955 7751956 CDR20291_0041 CDR20291_0042 cysS   TRUE 0.995 3.000 0.129 1.000   NA
 7751956 7751957 CDR20291_0042 CDR20291_0043     FALSE 0.011 508.000 0.000 1.000   NA
 7751957 7751958 CDR20291_0043 CDR20291_0044     TRUE 0.995 13.000 0.295 1.000 N NA
 7751958 7751959 CDR20291_0044 CDR20291_0045     TRUE 0.807 27.000 0.000 NA   NA
 7751959 7751960 CDR20291_0045 CDR20291_0046     FALSE 0.022 327.000 0.000 NA   NA
 7751960 7751961 CDR20291_0046 CDR20291_0047     FALSE 0.153 166.000 0.000 1.000   NA
 7751961 7751962 CDR20291_0047 CDR20291_0048     TRUE 0.988 4.000 0.032 1.000   NA
 7751962 7751963 CDR20291_0048 CDR20291_0049     TRUE 0.993 3.000 0.109 NA   NA
 7751963 7751964 CDR20291_0049 CDR20291_0050   sigH TRUE 0.979 50.000 0.361 NA   NA
 7751964 7751965 CDR20291_0050 CDR20291_0051 sigH   TRUE 0.862 74.000 0.004 0.063 N NA
 7751965 7751966 CDR20291_0051 CDR20291_0052   rpmG TRUE 0.633 250.000 0.099 1.000 Y NA
 7751966 7751967 CDR20291_0052 CDR20291_0053 rpmG secE TRUE 0.984 26.000 0.100 1.000 N NA
 7751967 7751968 CDR20291_0053 CDR20291_0054 secE nusG TRUE 0.998 20.000 0.843 1.000 N NA
 7751968 7751969 CDR20291_0054 CDR20291_0055 nusG rplK TRUE 0.994 36.000 0.681 1.000 N NA
 7751969 7751970 CDR20291_0055 CDR20291_0056 rplK rplA TRUE 0.997 70.000 0.838 0.021 Y NA
 7751970 7751971 CDR20291_0056 CDR20291_0057 rplA rplJ TRUE 0.886 223.000 0.302 0.021 Y NA
 7751971 7751972 CDR20291_0057 CDR20291_0058 rplJ rplL TRUE 0.998 58.000 0.884 0.015 Y NA
 7751972 7751973 CDR20291_0058 CDR20291_0059 rplL   FALSE 0.014 392.000 0.000 1.000 N NA
 7751973 7751974 CDR20291_0059 CDR20291_0060   rpoB FALSE 0.011 471.000 0.000 1.000 N NA
 7751974 7751975 CDR20291_0060 CDR20291_0061 rpoB rpoC TRUE 0.999 42.000 0.851 0.001 Y NA
 7751975 7751976 CDR20291_0061 CDR20291_0062 rpoC rpsL FALSE 0.196 286.000 0.035 1.000 N NA
 7751976 7751977 CDR20291_0062 CDR20291_0063 rpsL rpsG TRUE 0.968 123.000 0.224 0.003 Y NA
 7751977 7751978 CDR20291_0063 CDR20291_0064 rpsG fusA TRUE 0.995 49.000 0.579 1.000 Y NA
 7751978 7751979 CDR20291_0064 CDR20291_0065 fusA   TRUE 0.991 91.000 0.400 0.002 Y NA
 7751979 7751980 CDR20291_0065 CDR20291_0066   rpsJ TRUE 0.579 373.000 0.318 1.000 Y NA
 7751980 7751981 CDR20291_0066 CDR20291_0067 rpsJ rplC TRUE 0.991 92.000 0.467 0.021 Y NA
 7751981 7751982 CDR20291_0067 CDR20291_0068 rplC rplD TRUE 1.000 0.000 0.544 0.015 Y NA
 7751982 7751983 CDR20291_0068 CDR20291_0069 rplD rplW TRUE 0.999 0.000 0.307 0.015 Y NA
 7751983 7751984 CDR20291_0069 CDR20291_0070 rplW rplB TRUE 0.999 30.000 0.849 0.021 Y NA
 7751984 7751985 CDR20291_0070 CDR20291_0071 rplB rpsS TRUE 0.999 35.000 0.820 0.021 Y NA
 7751985 7751986 CDR20291_0071 CDR20291_0072 rpsS rplV TRUE 0.999 32.000 0.769 0.021 Y NA
 7751986 7751987 CDR20291_0072 CDR20291_0073 rplV rpsC TRUE 0.999 23.000 0.719 0.021 Y NA
 7751987 7751988 CDR20291_0073 CDR20291_0074 rpsC rplP TRUE 0.999 36.000 0.828 0.021 Y NA
 7751988 7751989 CDR20291_0074 CDR20291_0075 rplP rpmC TRUE 1.000 2.000 0.802 0.015 Y NA
 7751989 7751990 CDR20291_0075 CDR20291_0076 rpmC rpsQ TRUE 1.000 24.000 0.828 0.015 Y NA
 7751990 7751991 CDR20291_0076 CDR20291_0077 rpsQ rplN TRUE 0.999 26.000 0.791 0.021 Y NA
 7751991 7751992 CDR20291_0077 CDR20291_0078 rplN rplX TRUE 1.000 21.000 0.810 0.021 Y NA
 7751992 7751993 CDR20291_0078 CDR20291_0079 rplX rplE TRUE 0.999 30.000 0.758 0.015 Y NA
 7751993 7751994 CDR20291_0079 CDR20291_0080 rplE rpsN TRUE 0.999 18.000 0.496 0.015 Y NA
 7751994 7751995 CDR20291_0080 CDR20291_0081 rpsN rpsH TRUE 0.998 33.000 0.473 0.015 Y NA
 7751995 7751996 CDR20291_0081 CDR20291_0082 rpsH rplF TRUE 0.999 31.000 0.808 0.015 Y NA
 7751996 7751997 CDR20291_0082 CDR20291_0083 rplF rplR TRUE 0.999 36.000 0.815 0.015 Y NA
 7751997 7751998 CDR20291_0083 CDR20291_0084 rplR rpsE TRUE 1.000 21.000 0.814 0.021 Y NA
 7751998 7751999 CDR20291_0084 CDR20291_0085 rpsE rpmD TRUE 1.000 15.000 0.789 0.021 Y NA
 7751999 7752000 CDR20291_0085 CDR20291_0086 rpmD rplO TRUE 0.999 33.000 0.653 0.003 Y NA
 7752000 7752001 CDR20291_0086 CDR20291_0087 rplO prlA TRUE 0.992 44.000 0.730 1.000 N NA
 7752001 7752002 CDR20291_0087 CDR20291_0088 prlA adk TRUE 0.997 2.000 0.241 1.000 N NA
 7752002 7752003 CDR20291_0088 CDR20291_0089 adk map1 TRUE 0.997 1.000 0.290 1.000 N NA
 7752003 7752004 CDR20291_0089 CDR20291_0090 map1   TRUE 0.993 13.000 0.185 NA   NA
 7752004 7752005 CDR20291_0090 CDR20291_0091   infA TRUE 0.962 38.000 0.090 NA   NA
 7752005 7752006 CDR20291_0091 CDR20291_0092 infA rpmJ TRUE 0.985 36.000 0.257 1.000   NA
 7752006 7752007 CDR20291_0092 CDR20291_0093 rpmJ rpsM TRUE 0.864 153.000 0.194 0.015   NA
 7752007 7752008 CDR20291_0093 CDR20291_0094 rpsM rpsK TRUE 0.999 36.000 0.810 0.015 Y NA
 7752008 7752009 CDR20291_0094 CDR20291_0095 rpsK rpsD TRUE 0.998 32.000 0.509 0.021 Y NA
 7752009 7752010 CDR20291_0095 CDR20291_0096 rpsD rpoA TRUE 0.977 78.000 0.549 1.000 N NA
 7752010 7752011 CDR20291_0096 CDR20291_0097 rpoA rplQ TRUE 0.999 21.000 0.873 1.000 N NA
 7752011 7752012 CDR20291_0097 CDR20291_0098 rplQ   TRUE 0.778 120.000 0.074 1.000 N NA
 7752012 7752013 CDR20291_0098 CDR20291_0099     TRUE 0.999 33.000 0.713 0.038 Y NA
 7752013 7752014 CDR20291_0099 CDR20291_0100     TRUE 0.981 90.000 0.304 1.000 Y NA
 7752014 7752015 CDR20291_0100 CDR20291_0101   truA1 TRUE 0.992 32.000 0.404 1.000 N NA
 7752015 7752016 CDR20291_0101 CDR20291_0102 truA1   TRUE 0.870 120.000 0.031 1.000 Y NA
 7752016 7752017 CDR20291_0102 CDR20291_0103   rpsI TRUE 0.988 118.000 0.601 0.015 Y NA
 7752017 7752018 CDR20291_0103 CDR20291_0104 rpsI cwlD FALSE 0.058 459.000 0.011 1.000 N NA
 7752018 7752019 CDR20291_0104 CDR20291_r04 cwlD 16SrRNA FALSE 0.096 187.000 0.000 NA   NA
 7752019 10864309 CDR20291_r04 CDR20291_t39 16SrRNA   TRUE 0.819 26.000 0.000 NA   NA
 10864309 7752020 CDR20291_t39 CDR20291_r05   23SrRNA FALSE 0.045 250.000 0.000 NA   NA
 7752020 10864310 CDR20291_r05 CDR20291_t40 23SrRNA   FALSE 0.009 519.000 0.000 NA   NA
 10864310 7752021 CDR20291_t40 CDR20291_r06   16SrRNA TRUE 0.863 18.000 0.000 NA   NA
 7752021 7752022 CDR20291_r06 CDR20291_r07 16SrRNA 23SrRNA FALSE 0.007 610.000 0.000 NA   NA
 7752022 7752023 CDR20291_r07 CDR20291_r08 23SrRNA 5SrRNA TRUE 0.463 73.000 0.000 NA   NA
 7752025 7752026 CDR20291_0106 CDR20291_0107 nrdD nrdG TRUE 0.995 22.000 0.315 1.000 N NA
 7752026 10864311 CDR20291_0107 CDR20291_t41 nrdG   FALSE 0.004 1375.000 0.000 NA   NA
 10864311 7752027 CDR20291_t41 CDR20291_r20   23SrRNA FALSE 0.016 374.000 0.000 NA   NA
 7752027 7752028 CDR20291_r20 CDR20291_r21 23SrRNA 5SrRNA TRUE 0.463 73.000 0.000 NA   NA
 7752028 10864312 CDR20291_r21 CDR20291_t42 5SrRNA   TRUE 0.896 9.000 0.000 NA   NA
 10864312 10864313 CDR20291_t42 CDR20291_t45     FALSE 0.300 107.000 0.000 NA   NA
 10864313 10864314 CDR20291_t45 CDR20291_t46     TRUE 0.899 8.000 0.000 NA   NA
 10864314 10864315 CDR20291_t46 CDR20291_t47     TRUE 0.867 15.000 0.000 NA   NA
 10864315 10864316 CDR20291_t47 CDR20291_t48     TRUE 0.904 6.000 0.000 NA   NA
 10864316 10864317 CDR20291_t48 CDR20291_t49     TRUE 0.904 6.000 0.000 NA   NA
 10864317 10864318 CDR20291_t49 CDR20291_t50     TRUE 0.888 11.000 0.000 NA   NA
 10864318 10864319 CDR20291_t50 CDR20291_t51     TRUE 0.892 10.000 0.000 NA   NA
 10864319 7752029 CDR20291_t51 CDR20291_0108     FALSE 0.005 975.000 0.000 NA   NA
 7752029 7752030 CDR20291_0108 CDR20291_0109     TRUE 0.981 66.000 0.502 NA   NA
 7752030 7752031 CDR20291_0109 CDR20291_0110     TRUE 0.938 -3.000 0.000 NA   NA
 7752031 7752032 CDR20291_0110 CDR20291_0111   ptb FALSE 0.120 173.000 0.000 NA   NA
 7752032 7752033 CDR20291_0111 CDR20291_0112 ptb buk TRUE 0.998 22.000 0.275 1.000 Y NA
 7752033 7752034 CDR20291_0112 CDR20291_0113 buk   TRUE 0.952 59.000 0.163 NA   NA
 7752034 7752035 CDR20291_0113 CDR20291_0114     TRUE 0.623 43.000 0.000 NA   NA
 7752035 7752036 CDR20291_0114 CDR20291_0115     TRUE 0.918 29.000 0.000 0.002   NA
 7752036 7752037 CDR20291_0115 CDR20291_0116     TRUE 1.000 0.000 0.822 0.002 Y NA
 7752037 7752038 CDR20291_0116 CDR20291_0117     TRUE 1.000 1.000 0.797 0.002 Y NA
 7752038 7752039 CDR20291_0117 CDR20291_0118     TRUE 0.666 110.000 0.004 1.000 N NA
 7752039 7752040 CDR20291_0118 CDR20291_0119   glmS FALSE 0.219 267.000 0.030 1.000 N NA
 7752040 7752041 CDR20291_0119 CDR20291_0120 glmS   FALSE 0.011 453.000 0.000 1.000 N NA
 7752041 7752042 CDR20291_0120 CDR20291_0121     FALSE 0.010 484.000 0.000 NA   NA
 7752042 7752043 CDR20291_0121 CDR20291_0122   murA TRUE 0.997 3.000 0.346 NA   NA
 7752043 7752044 CDR20291_0122 CDR20291_0123 murA spoIIC TRUE 0.942 87.000 0.243 1.000 N NA
 7752044 7752045 CDR20291_0123 CDR20291_0124 spoIIC   TRUE 0.924 66.000 0.090 1.000 N NA
 7752045 7752046 CDR20291_0124 CDR20291_0125   spoIIID TRUE 0.879 98.000 0.093 1.000   NA
 7752046 7752047 CDR20291_0125 CDR20291_0126 spoIIID mreB1 TRUE 0.729 197.000 0.284 1.000   NA
 7752047 7752048 CDR20291_0126 CDR20291_0127 mreB1 fabZ TRUE 0.980 16.000 0.037 1.000 N NA
 7752050 7752051 CDR20291_0129 CDR20291_0130 metE   FALSE 0.024 316.000 0.000 NA   NA
 7752051 7752052 CDR20291_0130 CDR20291_0131     FALSE 0.039 264.000 0.000 NA   NA
 7752052 7752053 CDR20291_0131 CDR20291_0132     TRUE 0.989 3.000 0.032 1.000   NA
 7752053 7752054 CDR20291_0132 CDR20291_0133     FALSE 0.025 332.000 0.000 1.000   NA
 7752054 7752055 CDR20291_0133 CDR20291_0134     FALSE 0.323 141.000 0.000 0.035 N NA
 7752055 7752056 CDR20291_0134 CDR20291_0135     TRUE 0.975 25.000 0.000 0.030 Y NA
 7752056 7752057 CDR20291_0135 CDR20291_0136     TRUE 0.994 39.000 0.214 0.030 Y NA
 7752057 7752058 CDR20291_0136 CDR20291_0137     TRUE 0.987 11.000 0.048 1.000   NA
 7752058 7752059 CDR20291_0137 CDR20291_0138     TRUE 0.799 96.000 0.021 1.000   NA
 7752059 7752060 CDR20291_0138 CDR20291_0139     TRUE 0.984 48.000 0.137 1.000 Y NA
 7752060 7752061 CDR20291_0139 CDR20291_0140     TRUE 0.917 3.000 0.000 1.000 N NA
 7752061 7752062 CDR20291_0140 CDR20291_0141     FALSE 0.006 553.000 0.000 NA N NA
 7752062 7752063 CDR20291_0141 CDR20291_0142   secA1 TRUE 0.679 132.000 0.050 NA N NA
 7752063 7752064 CDR20291_0142 CDR20291_0143 secA1 prfB TRUE 0.794 106.000 0.048 1.000 N NA
 7752064 7752065 CDR20291_0143 CDR20291_0144 prfB   TRUE 0.557 135.000 0.004 1.000 N NA
 7752065 7752066 CDR20291_0144 CDR20291_0145     TRUE 0.557 148.000 0.018 1.000 N NA
 7752066 7752067 CDR20291_0145 CDR20291_0146     FALSE 0.027 302.000 0.000 NA   NA
 7752067 7752068 CDR20291_0146 CDR20291_0147     FALSE 0.022 329.000 0.000 NA   NA
 7752068 7752069 CDR20291_0147 CDR20291_0148     FALSE 0.191 139.000 0.000 NA   NA
 7752069 7752070 CDR20291_0148 CDR20291_0149     TRUE 0.993 15.000 0.217 NA   NA
 7752070 7752071 CDR20291_0149 CDR20291_0150   rimI TRUE 0.972 38.000 0.127 1.000   NA
 7752071 7752072 CDR20291_0150 CDR20291_0151 rimI gcp TRUE 0.992 6.000 0.090 1.000   NA
 7752072 7752073 CDR20291_0151 CDR20291_0152 gcp hpdB FALSE 0.029 297.000 0.000 1.000 N NA
 7752073 7752074 CDR20291_0152 CDR20291_0153 hpdB hpdC TRUE 0.910 4.000 0.000 NA   NA
 7752074 7752075 CDR20291_0153 CDR20291_0154 hpdC hpdA TRUE 0.957 -37.000 0.000 NA   NA
 7752075 7752076 CDR20291_0154 CDR20291_0155 hpdA   FALSE 0.024 320.000 0.000 NA   NA
 7752078 7752079 CDR20291_0157 CDR20291_0158     FALSE 0.004 1171.000 0.000 NA N NA
 7752079 7752080 CDR20291_0158 CDR20291_0159     FALSE 0.036 273.000 0.000 1.000 N NA
 7752080 7752081 CDR20291_0159 CDR20291_0160     TRUE 0.876 22.000 0.000 1.000   NA
 7752081 7752082 CDR20291_0160 CDR20291_0161     TRUE 0.998 29.000 1.000 NA   NA
 7752082 7752083 CDR20291_0161 CDR20291_0162     TRUE 0.999 16.000 1.000 NA   NA
 7752083 7752084 CDR20291_0162 CDR20291_0163     TRUE 0.564 51.000 0.000 NA   NA
 7752084 7752085 CDR20291_0163 CDR20291_0164     FALSE 0.010 484.000 0.000 NA   NA
 7752086 7752087 CDR20291_0165 CDR20291_0166     TRUE 0.721 37.000 0.000 1.000   NA
 7752087 7752088 CDR20291_0166 CDR20291_0167     FALSE 0.020 369.000 0.000 1.000   NA
 7752090 7752091 CDR20291_0169 CDR20291_0170     TRUE 0.982 16.000 0.038 1.000   NA
 7752092 7752093 CDR20291_0171 CDR20291_0172     FALSE 0.220 139.000 0.000 1.000   NA
 7752095 7752096 CDR20291_0174 CDR20291_0175     FALSE 0.127 170.000 0.000 1.000 N NA
 7752096 7752097 CDR20291_0175 CDR20291_0176     TRUE 0.981 56.000 0.462 NA   NA
 7752097 7752098 CDR20291_0176 CDR20291_0177     TRUE 0.923 98.000 0.222 NA   NA
 7752100 7752101 CDR20291_0179 CDR20291_0180   gluD FALSE 0.214 129.000 0.000 NA   NA
 7752101 7752102 CDR20291_0180 CDR20291_0181 gluD   FALSE 0.087 193.000 0.000 NA   NA
 7752102 7752103 CDR20291_0181 CDR20291_0182     FALSE 0.022 331.000 0.000 NA   NA
 7752103 7752104 CDR20291_0182 CDR20291_0183     FALSE 0.039 264.000 0.000 NA   NA
 7752104 7752105 CDR20291_0183 CDR20291_0184     FALSE 0.014 399.000 0.000 NA   NA
 7752105 7752106 CDR20291_0184 CDR20291_0185   pyrB FALSE 0.024 296.000 0.000 NA N NA
 7752106 7752107 CDR20291_0185 CDR20291_0186 pyrB pyrK TRUE 0.903 39.000 0.003 1.000 N NA
 7752107 7752108 CDR20291_0186 CDR20291_0187 pyrK pyrD TRUE 0.988 47.000 0.592 1.000 N NA
 7752108 7752109 CDR20291_0187 CDR20291_0188 pyrD pyrE TRUE 0.951 85.000 0.060 1.000 Y NA
 7752109 7752110 CDR20291_0188 CDR20291_0189 pyrE   FALSE 0.068 215.000 0.000 1.000 N NA
 7752112 7752113 CDR20291_0191 CDR20291_0192     FALSE 0.029 294.000 0.000 NA   NA
 7752113 7752114 CDR20291_0192 CDR20291_0193   cls TRUE 0.865 18.000 0.000 1.000 N NA
 7752114 7752115 CDR20291_0193 CDR20291_0194 cls groES FALSE 0.088 193.000 0.000 1.000 N NA
 7752115 7752116 CDR20291_0194 CDR20291_0195 groES groEL TRUE 0.998 33.000 0.674 1.000 Y NA
 7752116 7752117 CDR20291_0195 CDR20291_0196 groEL   FALSE 0.047 262.000 0.000 1.000   NA
 7752117 7752118 CDR20291_0196 CDR20291_0197     TRUE 0.416 84.000 0.000 NA   NA
 7752118 7752119 CDR20291_0197 CDR20291_0198   guaA FALSE 0.015 382.000 0.000 NA   NA
 7752119 7752120 CDR20291_0198 CDR20291_0199 guaA   FALSE 0.040 539.000 0.000 1.000 Y NA
 7752122 7752123 CDR20291_0201 CDR20291_0202     TRUE 0.936 126.000 0.069 0.002 Y NA
 7752124 7752125 CDR20291_0203 CDR20291_0204     FALSE 0.026 310.000 0.000 NA   NA
 7752126 7752127 CDR20291_0205 CDR20291_0206     FALSE 0.043 256.000 0.000 1.000 N NA
 7752127 7752128 CDR20291_0206 CDR20291_0207     TRUE 0.999 -3.000 0.538 0.035 N NA
 7752128 7752129 CDR20291_0207 CDR20291_0208     TRUE 1.000 2.000 0.900 0.035 Y NA
 7752129 7752130 CDR20291_0208 CDR20291_0209     TRUE 0.991 67.000 0.320 0.035 Y NA
 7752130 7752131 CDR20291_0209 CDR20291_0210     TRUE 0.357 104.000 0.000 1.000   NA
 7752131 7752132 CDR20291_0210 CDR20291_0211     TRUE 0.437 88.000 0.000 1.000   NA
 7752133 7752134 CDR20291_0212 CDR20291_0213     TRUE 0.999 6.000 0.750 NA   NA
 7752134 7752135 CDR20291_0213 CDR20291_0214     FALSE 0.008 545.000 0.000 NA   NA
 7752136 7752137 CDR20291_0215 CDR20291_0216 purE purC TRUE 0.995 6.000 0.035 1.000 Y NA
 7752137 7752138 CDR20291_0216 CDR20291_0217 purC purF TRUE 0.996 12.000 0.082 1.000 Y NA
 7752138 7752139 CDR20291_0217 CDR20291_0218 purF purG TRUE 0.999 -6.000 0.248 1.000 Y NA
 7752139 7752140 CDR20291_0218 CDR20291_0219 purG purN TRUE 0.999 -6.000 0.238 0.002 Y NA
 7752140 7752141 CDR20291_0219 CDR20291_0220 purN purH TRUE 0.999 -7.000 0.225 1.000 Y NA
 7752141 7752142 CDR20291_0220 CDR20291_0221 purH purD TRUE 0.998 11.000 0.238 1.000 Y NA
 7752142 7752143 CDR20291_0221 CDR20291_0222 purD purL TRUE 0.987 25.000 0.006 1.000 Y NA
 7752143 7752144 CDR20291_0222 CDR20291_0223 purL   FALSE 0.077 206.000 0.000 1.000 N NA
 7752144 7752145 CDR20291_0223 CDR20291_0224     TRUE 0.799 109.000 0.000 0.002 Y NA
 7752145 7752146 CDR20291_0224 CDR20291_0225     TRUE 0.990 37.000 0.139 1.000 Y NA
 7752146 7752147 CDR20291_0225 CDR20291_0226     TRUE 0.981 38.000 0.047 1.000 Y NA
 7752147 7752148 CDR20291_0226 CDR20291_0227     TRUE 0.955 -24.000 0.000 NA   NA
 7752148 7752149 CDR20291_0227 CDR20291_0228     TRUE 0.896 9.000 0.000 NA   NA
 7752149 7752150 CDR20291_0228 CDR20291_0229   fliN TRUE 0.842 24.000 0.000 NA   NA
 7752150 7752151 CDR20291_0229 CDR20291_0230 fliN flgM FALSE 0.184 152.000 0.000 1.000   NA
 7752151 7752152 CDR20291_0230 CDR20291_0231 flgM   TRUE 0.999 5.000 0.421 0.002   NA
 7752152 7752153 CDR20291_0231 CDR20291_0232   flgK TRUE 0.990 18.000 0.038 0.002   NA
 7752153 7752154 CDR20291_0232 CDR20291_0233 flgK flgL TRUE 0.994 19.000 0.093 0.001   NA
 7752154 7752155 CDR20291_0233 CDR20291_0234 flgL   TRUE 0.996 16.000 0.385 NA   NA
 7752155 7752156 CDR20291_0234 CDR20291_0235   csrA TRUE 0.995 -6.000 0.096 NA   NA
 7752156 7752157 CDR20291_0235 CDR20291_0236 csrA fliS1 TRUE 0.975 22.000 0.023 1.000 N NA
 7752157 7752158 CDR20291_0236 CDR20291_0237 fliS1 fliS2 TRUE 0.993 0.000 0.000 0.002 Y NA
 7752158 7752159 CDR20291_0237 CDR20291_0238 fliS2 fliD TRUE 0.999 21.000 0.370 0.002 Y NA
 7752159 7752160 CDR20291_0238 CDR20291_0239 fliD   TRUE 0.985 3.000 0.019 NA   NA
 7752160 7752161 CDR20291_0239 CDR20291_0240   fliC TRUE 0.867 15.000 0.000 NA   NA
 7752161 7752162 CDR20291_0240 CDR20291_0241 fliC   TRUE 0.869 15.000 0.000 1.000 N NA
 7752162 7752163 CDR20291_0241 CDR20291_0242     TRUE 0.864 24.000 0.000 1.000   NA
 7752163 7752164 CDR20291_0242 CDR20291_0243     TRUE 0.944 -7.000 0.000 NA   NA
 7752164 7752165 CDR20291_0243 CDR20291_0244     TRUE 0.986 9.000 0.043 NA   NA
 7752165 7752166 CDR20291_0244 CDR20291_0245     TRUE 0.832 92.000 0.034 1.000   NA
 7752166 7752167 CDR20291_0245 CDR20291_0246     TRUE 0.976 11.000 0.000 1.000 Y NA
 7752167 7752168 CDR20291_0246 CDR20291_0247     FALSE 0.007 579.000 0.000 1.000 N NA
 7752168 7752169 CDR20291_0247 CDR20291_0248   flgB FALSE 0.006 806.000 0.000 1.000 N NA
 7752169 7752170 CDR20291_0248 CDR20291_0249 flgB flgC TRUE 0.992 26.000 0.010 0.004 Y NA
 7752170 7752171 CDR20291_0249 CDR20291_0250 flgC fliE TRUE 0.998 10.000 0.095 0.004 Y NA
 7752171 7752172 CDR20291_0250 CDR20291_0251 fliE fliF TRUE 0.997 25.000 0.112 0.006 Y NA
 7752172 7752173 CDR20291_0251 CDR20291_0252 fliF fliG TRUE 0.999 13.000 0.477 0.006 Y NA
 7752173 7752174 CDR20291_0252 CDR20291_0253 fliG fliH TRUE 0.999 -19.000 0.308 NA Y NA
 7752174 7752175 CDR20291_0253 CDR20291_0254 fliH fliI TRUE 0.999 4.000 0.379 NA Y NA
 7752175 7752176 CDR20291_0254 CDR20291_0255 fliI fliJ TRUE 0.995 32.000 0.241 1.000 Y NA
 7752176 7752177 CDR20291_0255 CDR20291_0256 fliJ fliK TRUE 0.917 28.000 0.000 0.006   NA
 7752177 7752178 CDR20291_0256 CDR20291_0257 fliK flgD TRUE 0.863 18.000 0.000 NA   NA
 7752178 7752179 CDR20291_0257 CDR20291_0258 flgD flgE TRUE 0.965 27.000 0.023 NA   NA
 7752179 7752180 CDR20291_0258 CDR20291_0259 flgE   TRUE 0.995 13.000 0.077 NA Y NA
 7752180 7752181 CDR20291_0259 CDR20291_0260   motA TRUE 0.999 0.000 0.301 NA Y NA
 7752181 7752182 CDR20291_0260 CDR20291_0261 motA motB TRUE 0.999 -10.000 0.350 1.000 Y NA
 7752182 7752183 CDR20291_0261 CDR20291_0262 motB fliL TRUE 0.998 12.000 0.314 1.000 Y NA
 7752183 7752184 CDR20291_0262 CDR20291_0263 fliL   TRUE 0.867 15.000 0.000 NA   NA
 7752184 7752185 CDR20291_0263 CDR20291_0264   fliP TRUE 0.926 1.000 0.000 NA   NA
 7752185 7752186 CDR20291_0264 CDR20291_0265 fliP fliQ TRUE 0.998 13.000 0.162 0.003 Y NA
 7752186 7752187 CDR20291_0265 CDR20291_0266 fliQ flhB TRUE 0.998 12.000 0.114 0.002 Y NA
 7752187 7752188 CDR20291_0266 CDR20291_0267 flhB flhA TRUE 0.999 9.000 0.207 0.002 Y NA
 7752188 7752189 CDR20291_0267 CDR20291_0268 flhA flhF TRUE 1.000 -22.000 0.440 1.000 Y NA
 7752189 7752190 CDR20291_0268 CDR20291_0269 flhF fleN TRUE 0.998 -3.000 0.382 1.000 N NA
 7752190 7752191 CDR20291_0269 CDR20291_0270 fleN fliA TRUE 0.983 14.000 0.045 1.000 N NA
 7752191 7752192 CDR20291_0270 CDR20291_0271 fliA   TRUE 0.863 16.000 0.000 NA   NA
 7752192 7752193 CDR20291_0271 CDR20291_0272   flgG FALSE 0.071 211.000 0.000 NA   NA
 7752193 7752194 CDR20291_0272 CDR20291_0273 flgG   TRUE 0.997 21.000 0.088 0.004 Y NA
 7752194 7752195 CDR20291_0273 CDR20291_0274   fliM TRUE 0.981 23.000 0.000 0.006 Y NA
 7752195 7752196 CDR20291_0274 CDR20291_0275 fliM fliN TRUE 1.000 3.000 0.508 0.002 Y NA
 7752196 7752197 CDR20291_0275 CDR20291_0276 fliN   TRUE 0.780 32.000 0.000 1.000   NA
 7752197 7752198 CDR20291_0276 CDR20291_0277   htpG FALSE 0.290 116.000 0.000 1.000   NA
 7752198 7752199 CDR20291_0277 CDR20291_0278 htpG dhaT FALSE 0.015 388.000 0.000 1.000 N NA
 7752199 7752200 CDR20291_0278 CDR20291_0279 dhaT spl FALSE 0.057 227.000 0.000 1.000 N NA
 7752200 7752201 CDR20291_0279 CDR20291_0280 spl   FALSE 0.124 182.000 0.000 1.000   NA
 7752201 7752202 CDR20291_0280 CDR20291_0281     TRUE 0.867 15.000 0.000 NA   NA
 7752204 7752205 CDR20291_0283 CDR20291_0284     FALSE 0.013 403.000 0.000 NA   NA
 7752207 7752208 CDR20291_0286 CDR20291_0287     FALSE 0.117 221.000 0.000 0.050 N NA
 7752208 7752209 CDR20291_0287 CDR20291_0288     TRUE 0.999 24.000 0.400 0.038 Y NA
 7752209 7752210 CDR20291_0288 CDR20291_0289     TRUE 0.988 3.000 0.000 0.050 Y NA
 7752210 7752211 CDR20291_0289 CDR20291_0290     TRUE 0.980 18.000 0.000 0.050 Y NA
 7752211 7752212 CDR20291_0290 CDR20291_0291     TRUE 0.970 27.000 0.000 0.050 Y NA
 7752212 7752213 CDR20291_0291 CDR20291_0292     TRUE 0.991 0.000 0.000 0.050 Y NA
 7752213 7752214 CDR20291_0292 CDR20291_0293     TRUE 0.593 47.000 0.000 NA   NA
 7752214 7752215 CDR20291_0293 CDR20291_0294     TRUE 0.500 65.000 0.000 NA   NA
 7752215 7752216 CDR20291_0294 CDR20291_0295     FALSE 0.005 963.000 0.000 1.000 N NA
 7752216 7752217 CDR20291_0295 CDR20291_0296     FALSE 0.080 202.000 0.000 1.000 N NA
 7752217 7752218 CDR20291_0296 CDR20291_0297     TRUE 0.999 -3.000 0.569 NA   NA
 7752218 7752219 CDR20291_0297 CDR20291_0298     FALSE 0.015 383.000 0.000 NA   NA
 7752219 7752220 CDR20291_0298 CDR20291_0299     TRUE 0.478 70.000 0.000 NA   NA
 7752220 7752221 CDR20291_0299 CDR20291_0300     FALSE 0.076 206.000 0.000 NA   NA
 7752221 7752222 CDR20291_0300 CDR20291_0301   rbsR FALSE 0.065 219.000 0.000 1.000 N NA
 7752222 7752223 CDR20291_0301 CDR20291_0302 rbsR rbsK TRUE 0.637 42.000 0.000 1.000 N NA
 7752223 7752224 CDR20291_0302 CDR20291_0303 rbsK rbsB TRUE 0.868 48.000 0.000 NA Y NA
 7752224 7752225 CDR20291_0303 CDR20291_0304 rbsB rbsA TRUE 0.849 54.000 0.000 NA Y NA
 7752225 7752226 CDR20291_0304 CDR20291_0305 rbsA rbsC TRUE 0.990 -16.000 0.000 1.000 Y NA
 7752226 7752227 CDR20291_0305 CDR20291_0306 rbsC argE FALSE 0.102 184.000 0.000 1.000 N NA
 7752227 7752228 CDR20291_0306 CDR20291_0307 argE   TRUE 0.996 20.000 0.375 NA   NA
 7752228 7752229 CDR20291_0307 CDR20291_0308   abgB1 FALSE 0.120 173.000 0.000 NA   NA
 7752231 7752232 CDR20291_0310 CDR20291_0311     FALSE 0.004 1736.000 0.000 NA   NA
 7752232 7752233 CDR20291_0311 CDR20291_0312     TRUE 0.993 -10.000 0.039 NA   NA
 7752233 7752234 CDR20291_0312 CDR20291_0313     TRUE 0.992 2.000 0.069 NA   NA
 7752238 7752239 CDR20291_0317 CDR20291_0318     TRUE 0.994 23.000 0.286 1.000 N NA
 7752239 7752240 CDR20291_0318 CDR20291_r09   16SrRNA FALSE 0.009 495.000 0.000 NA   NA
 7752240 7752241 CDR20291_r09 CDR20291_r10 16SrRNA 23SrRNA FALSE 0.091 191.000 0.000 NA   NA
 7752241 7752242 CDR20291_r10 CDR20291_r11 23SrRNA 5SrRNA TRUE 0.463 73.000 0.000 NA   NA
 7752242 7752243 CDR20291_r11 CDR20291_0319 5SrRNA   FALSE 0.112 178.000 0.000 NA   NA
 7752243 7752244 CDR20291_0319 CDR20291_0320     TRUE 0.856 22.000 0.000 NA   NA
 7752245 7752246 CDR20291_0321 CDR20291_0322     TRUE 0.991 11.000 0.118 NA   NA
 7752246 7752247 CDR20291_0322 CDR20291_0323     TRUE 0.996 -7.000 0.118 NA   NA
 7752247 7752248 CDR20291_0323 CDR20291_0324     TRUE 0.969 91.000 0.500 1.000 N NA
 7752248 7752249 CDR20291_0324 CDR20291_0325     TRUE 1.000 2.000 0.750 1.000 Y NA
 7752249 7752250 CDR20291_0325 CDR20291_0326     TRUE 0.957 -40.000 0.000 NA   NA
 7752251 7752252 CDR20291_0327 CDR20291_0328     TRUE 0.999 14.000 0.822 NA   NA
 7752252 7752253 CDR20291_0328 CDR20291_0329   cbiM FALSE 0.009 513.000 0.000 NA   NA
 7752253 7752254 CDR20291_0329 CDR20291_0330 cbiM cbiN TRUE 1.000 -10.000 0.861 0.010 Y NA
 7752254 7752255 CDR20291_0330 CDR20291_0331 cbiN cbiQ TRUE 1.000 3.000 0.804 0.001 Y NA
 7752255 7752256 CDR20291_0331 CDR20291_0332 cbiQ cbiO TRUE 0.999 -7.000 0.152 0.002 Y NA
 7752256 7752257 CDR20291_0332 CDR20291_0333 cbiO pcrA FALSE 0.055 231.000 0.000 1.000 N NA
 7752257 7752258 CDR20291_0333 CDR20291_0334 pcrA   TRUE 0.970 17.000 0.005 1.000 N NA
 7752258 7752259 CDR20291_0334 CDR20291_0335     TRUE 0.951 31.000 0.011 1.000   NA
 7752259 7752260 CDR20291_0335 CDR20291_0336   ppiB TRUE 0.902 65.000 0.045 1.000   NA
 7752260 7752261 CDR20291_0336 CDR20291_0337 ppiB   FALSE 0.005 825.000 0.000 NA   NA
 7752264 7752265 CDR20291_0340 CDR20291_0341     TRUE 0.807 27.000 0.000 NA   NA
 7752265 7752266 CDR20291_0341 CDR20291_0342     TRUE 0.901 12.000 0.000 1.000   NA
 7752267 7752268 CDR20291_0343 CDR20291_0344     TRUE 0.967 19.000 0.000 NA Y NA
 7752269 7752270 CDR20291_0345 CDR20291_0346     TRUE 0.832 25.000 0.000 NA   NA
 7752270 7752271 CDR20291_0346 CDR20291_0347     FALSE 0.053 233.000 0.000 NA   NA
 7752272 7752273 CDR20291_0348 CDR20291_0349     TRUE 0.951 -13.000 0.000 NA   NA
 7752273 7752274 CDR20291_0349 CDR20291_0350     TRUE 0.905 51.000 0.025 1.000   NA
 7752274 7752275 CDR20291_0350 CDR20291_0351     TRUE 0.793 110.000 0.050 1.000   NA
 7752275 7752276 CDR20291_0351 CDR20291_0352     TRUE 0.398 87.000 0.000 NA   NA
 7752276 7752277 CDR20291_0352 CDR20291_0353     TRUE 0.725 34.000 0.000 NA   NA
 7752277 7752278 CDR20291_0353 CDR20291_0354     FALSE 0.188 140.000 0.000 NA   NA
 7752278 7752279 CDR20291_0354 CDR20291_0355     TRUE 0.975 28.000 0.062 NA   NA
 7752279 7752280 CDR20291_0355 CDR20291_0356     FALSE 0.055 229.000 0.000 NA   NA
 7752280 7752281 CDR20291_0356 CDR20291_0357     TRUE 0.404 86.000 0.000 NA   NA
 7752281 7752282 CDR20291_0357 CDR20291_0358     TRUE 0.541 55.000 0.000 NA   NA
 7752282 7752283 CDR20291_0358 CDR20291_0359   bglF FALSE 0.096 247.000 0.000 0.098   NA
 7752283 7752284 CDR20291_0359 CDR20291_0360 bglF bglA TRUE 0.998 3.000 0.167 1.000 Y NA
 7752284 7752285 CDR20291_0360 CDR20291_0361 bglA bglG TRUE 0.991 24.000 0.167 1.000   NA
 7752285 7752286 CDR20291_0361 CDR20291_0362 bglG   FALSE 0.009 566.000 0.000 1.000   NA
 7752287 7752288 CDR20291_0363 CDR20291_0364     TRUE 0.976 27.000 0.059 NA   NA
 7752288 7752289 CDR20291_0364 CDR20291_0365   ldhA FALSE 0.017 371.000 0.000 NA   NA
 7752290 7752291 CDR20291_0366 CDR20291_0367 hadA hadI TRUE 0.875 30.000 0.000 0.035 N NA
 7752291 7752292 CDR20291_0367 CDR20291_0368 hadI hadB TRUE 0.878 9.000 0.000 NA N NA
 7752292 7752293 CDR20291_0368 CDR20291_0369 hadB hadC TRUE 1.000 0.000 0.750 NA Y NA
 7752293 7752294 CDR20291_0369 CDR20291_0370 hadC acdB TRUE 0.539 48.000 0.000 NA N NA
 7752294 7752295 CDR20291_0370 CDR20291_0371 acdB etfB1 TRUE 0.997 33.000 0.750 0.048 N NA
 7752295 7752296 CDR20291_0371 CDR20291_0372 etfB1 etfA1 TRUE 1.000 19.000 0.750 0.016 Y NA
 7752296 7752297 CDR20291_0372 CDR20291_0373 etfA1   FALSE 0.010 483.000 0.000 1.000 N NA
 7752299 7752300 CDR20291_0375 CDR20291_0376     TRUE 0.932 0.000 0.000 NA   NA
 7752300 7752301 CDR20291_0376 CDR20291_0377     FALSE 0.005 648.000 0.000 NA N NA
 7752301 7752302 CDR20291_0377 CDR20291_0378     FALSE 0.005 664.000 0.000 NA N NA
 7752302 7752303 CDR20291_0378 CDR20291_0379     FALSE 0.008 523.000 0.000 NA   NA
 7752303 7752304 CDR20291_0379 CDR20291_0380     TRUE 0.398 87.000 0.000 NA   NA
 7752304 7752305 CDR20291_0380 CDR20291_0381     FALSE 0.124 171.000 0.000 NA   NA
 7752306 7752307 CDR20291_0382 CDR20291_0383     TRUE 0.988 -6.000 0.000 1.000 Y NA
 7752308 7752309 CDR20291_0384 CDR20291_0385 rocR   FALSE 0.050 256.000 0.000 1.000   NA
 7752309 7752310 CDR20291_0385 CDR20291_0386     TRUE 0.869 97.000 0.086 NA   NA
 7752310 7752311 CDR20291_0386 CDR20291_0387     TRUE 0.998 -7.000 0.400 NA   NA
 7752311 7752312 CDR20291_0387 CDR20291_0388   oraS TRUE 0.928 78.000 0.143 NA   NA
 7752312 7752313 CDR20291_0388 CDR20291_0389 oraS oraE TRUE 0.999 -6.000 0.867 NA   NA
 7752313 7752314 CDR20291_0389 CDR20291_0390 oraE   TRUE 0.996 0.000 0.143 NA   NA
 7752314 7752315 CDR20291_0390 CDR20291_0391     TRUE 0.952 -15.000 0.000 NA   NA
 7752315 7752316 CDR20291_0391 CDR20291_0392     TRUE 0.737 30.000 0.000 NA N NA
 7752316 7752317 CDR20291_0392 CDR20291_0393     FALSE 0.010 429.000 0.000 NA N NA
 7752317 7752318 CDR20291_0393 CDR20291_0394     FALSE 0.028 298.000 0.000 NA   NA
 7752318 7752319 CDR20291_0394 CDR20291_0395     FALSE 0.007 571.000 0.000 NA   NA
 7752319 7752320 CDR20291_0395 CDR20291_0396     TRUE 0.532 258.000 0.154 0.068   NA
 7752322 7752323 CDR20291_0398 CDR20291_0399     TRUE 0.796 28.000 0.000 NA   NA
 7752323 7752324 CDR20291_0399 CDR20291_0400     FALSE 0.094 344.000 0.000 1.000 Y NA
 7752324 7752325 CDR20291_0400 CDR20291_0401     TRUE 0.999 -3.000 0.500 1.000 Y NA
 7752326 7752327 CDR20291_0402 CDR20291_0403     TRUE 0.986 0.000 0.000 1.000 Y NA
 7752327 7752328 CDR20291_0403 CDR20291_0404     TRUE 0.523 145.000 0.000 1.000 Y NA
 7752328 7752329 CDR20291_0404 CDR20291_0405     FALSE 0.021 314.000 0.000 NA N NA
 7752330 7752331 CDR20291_0406 CDR20291_0407     FALSE 0.011 504.000 0.000 1.000   NA
 7752331 7752332 CDR20291_0407 CDR20291_0408     TRUE 1.000 -3.000 0.600 0.006 Y NA
 7752332 7752333 CDR20291_0408 CDR20291_0409     TRUE 0.971 99.000 0.600 1.000   NA
 7752333 7752334 CDR20291_0409 CDR20291_0410   malL TRUE 0.993 14.000 0.188 1.000   NA
 7752334 7752335 CDR20291_0410 CDR20291_0411 malL   TRUE 0.998 5.000 0.176 1.000 Y NA
 7752336 7752337 CDR20291_0412 CDR20291_0413 blaR blaI TRUE 0.999 3.000 0.429 1.000 Y NA
 7752338 7752339 CDR20291_0414 CDR20291_0415     TRUE 0.884 12.000 0.000 NA   NA
 7752339 7752340 CDR20291_0415 CDR20291_0416     TRUE 0.443 68.000 0.000 NA N NA
 7752341 7752342 CDR20291_0417 CDR20291_0418     TRUE 0.819 26.000 0.000 NA   NA
 7752343 7752344 CDR20291_0419 CDR20291_0420   spaF FALSE 0.098 186.000 0.000 NA   NA
 7752344 7752345 CDR20291_0420 CDR20291_0421 spaF spaE TRUE 0.998 -3.000 0.449 NA   NA
 7752345 7752346 CDR20291_0421 CDR20291_0422 spaE spaG TRUE 0.938 -3.000 0.000 NA   NA
 7752346 7752347 CDR20291_0422 CDR20291_0423 spaG spaR TRUE 0.411 85.000 0.000 NA   NA
 7752347 7752348 CDR20291_0423 CDR20291_0424 spaR spaK TRUE 0.970 19.000 0.000 1.000 Y NA
 7752349 7752350 CDR20291_0425 CDR20291_0426     TRUE 0.917 3.000 0.000 1.000 N NA
 7752350 7752351 CDR20291_0426 CDR20291_0427     FALSE 0.037 286.000 0.000 1.000   NA
 7752351 7752352 CDR20291_0427 CDR20291_0428     FALSE 0.074 271.000 0.000 0.097   NA
 7752352 7752353 CDR20291_0428 CDR20291_0429     TRUE 0.980 6.000 0.000 1.000 Y NA
 7752353 7752354 CDR20291_0429 CDR20291_0430     FALSE 0.006 821.000 0.000 1.000   NA
 7752357 7752358 CDR20291_0433 CDR20291_0434     TRUE 0.596 47.000 0.000 1.000 N NA
 7752358 7752359 CDR20291_0434 CDR20291_0435     TRUE 0.967 29.000 0.000 0.029 Y NA
 7752359 7752360 CDR20291_0435 CDR20291_0436     TRUE 0.993 47.000 0.250 0.049 Y NA
 7752360 7752361 CDR20291_0436 CDR20291_0437     TRUE 1.000 24.000 0.875 0.049 Y NA
 7752361 7752362 CDR20291_0437 CDR20291_0438     FALSE 0.011 451.000 0.000 1.000 N NA
 7752362 7752363 CDR20291_0438 CDR20291_0439     TRUE 0.999 -7.000 0.256 1.000 Y NA
 7752363 7752364 CDR20291_0439 CDR20291_0440     FALSE 0.011 401.000 0.000 NA N NA
 7752365 7752366 CDR20291_0441 CDR20291_0442     TRUE 0.626 43.000 0.000 1.000 N NA
 7752367 7752368 CDR20291_0443 CDR20291_0444     TRUE 0.926 1.000 0.000 NA   NA
 7752368 7752369 CDR20291_0444 CDR20291_0445     FALSE 0.058 226.000 0.000 NA   NA
 7752369 7752370 CDR20291_0445 CDR20291_0446     FALSE 0.043 254.000 0.000 NA   NA
 7752370 7752371 CDR20291_0446 CDR20291_0447     TRUE 0.998 -9.000 0.286 1.000   NA
 7752371 7752372 CDR20291_0447 CDR20291_0448     FALSE 0.023 1168.000 0.000 1.000 Y NA
 7752372 7752373 CDR20291_0448 CDR20291_0449     FALSE 0.229 123.000 0.000 NA   NA
 7752374 7752375 CDR20291_0450 CDR20291_0451     TRUE 0.675 35.000 0.000 NA N NA
 7752375 7752376 CDR20291_0451 CDR20291_0452     FALSE 0.018 362.000 0.000 NA   NA
 7752376 7752377 CDR20291_0452 CDR20291_0453     FALSE 0.166 212.000 0.000 0.019   NA
 7752377 7752378 CDR20291_0453 CDR20291_0454     TRUE 0.878 13.000 0.000 NA   NA
 7752378 7752379 CDR20291_0454 CDR20291_0455     TRUE 0.910 4.000 0.000 NA   NA
 7752380 7752381 CDR20291_0456 CDR20291_0457     FALSE 0.117 175.000 0.000 NA   NA
 7752381 7752382 CDR20291_0457 CDR20291_0458   cheB FALSE 0.006 744.000 0.000 NA   NA
 7752382 7752383 CDR20291_0458 CDR20291_0459 cheB cheC TRUE 0.732 162.000 0.016 NA Y NA
 7752383 7752384 CDR20291_0459 CDR20291_0460 cheC cheD TRUE 1.000 -3.000 0.606 NA Y NA
 7752384 7752385 CDR20291_0460 CDR20291_0461 cheD cheW TRUE 0.895 43.000 0.000 1.000 Y NA
 7752385 7752386 CDR20291_0461 CDR20291_0462 cheW   TRUE 0.644 115.000 0.000 1.000 Y NA
 7752386 7752387 CDR20291_0462 CDR20291_0463     TRUE 0.959 26.000 0.000 1.000 Y NA
 7752387 7752388 CDR20291_0463 CDR20291_0464   cheA TRUE 0.867 227.000 0.250 0.005 Y NA
 7752388 7752389 CDR20291_0464 CDR20291_0465 cheA   TRUE 0.999 13.000 0.375 0.005 Y NA
 7752389 7752390 CDR20291_0465 CDR20291_0466   cheR TRUE 0.986 36.000 0.070 1.000 Y NA
 7752390 7752391 CDR20291_0466 CDR20291_0467 cheR   TRUE 0.973 58.000 0.302 1.000   NA
 7752391 7752392 CDR20291_0467 CDR20291_0468     FALSE 0.306 106.000 0.000 NA   NA
 7752392 7752393 CDR20291_0468 CDR20291_0469     TRUE 0.492 67.000 0.000 NA   NA
 7752393 7752394 CDR20291_0469 CDR20291_0470     TRUE 0.377 92.000 0.000 NA   NA
 7752394 7752395 CDR20291_0470 CDR20291_0471     FALSE 0.012 443.000 0.000 NA   NA
 7752395 7752396 CDR20291_0471 CDR20291_0472     FALSE 0.077 205.000 0.000 NA   NA
 7752396 7752397 CDR20291_0472 CDR20291_0473     TRUE 0.999 11.000 0.727 NA Y NA
 7752397 7752398 CDR20291_0473 CDR20291_0474     FALSE 0.066 216.000 0.000 NA   NA
 7752398 7752399 CDR20291_0474 CDR20291_0475     FALSE 0.004 1193.000 0.000 NA   NA
 7752401 7752402 CDR20291_0477 CDR20291_0478 sleB   TRUE 0.836 79.000 0.024 NA   NA
 7752402 7752403 CDR20291_0478 CDR20291_0479   sip2 TRUE 0.837 100.000 0.073 NA N NA
 7752403 7752404 CDR20291_0479 CDR20291_0480 sip2 sip2 TRUE 0.604 166.000 0.000 0.001 Y NA
 7752404 7752405 CDR20291_0480 CDR20291_0481 sip2   TRUE 0.996 10.000 0.333 1.000 N NA
 7752405 7752406 CDR20291_0481 CDR20291_0482     TRUE 0.832 74.000 0.013 1.000 N NA
 7752406 7752407 CDR20291_0482 CDR20291_0483   glsA FALSE 0.007 578.000 0.000 1.000 N NA
 7752407 7752408 CDR20291_0483 CDR20291_0484 glsA   TRUE 0.391 98.000 0.000 1.000   NA
 7752408 7752409 CDR20291_0484 CDR20291_0485   nfo FALSE 0.021 488.000 0.000 0.059   NA
 7752409 7752410 CDR20291_0485 CDR20291_0486 nfo   FALSE 0.052 252.000 0.000 1.000   NA
 7752412 7752413 CDR20291_0488 CDR20291_0489     TRUE 0.807 106.000 0.055 1.000 N NA
 7752413 7752414 CDR20291_0489 CDR20291_0490   nth FALSE 0.030 644.000 0.002 1.000 N NA
 7752414 7752415 CDR20291_0490 CDR20291_0491 nth   FALSE 0.324 194.000 0.005 1.000 N NA
 7752415 7752416 CDR20291_0491 CDR20291_0492     TRUE 0.927 36.000 0.008 NA   NA
 7752416 7752417 CDR20291_0492 CDR20291_0493     FALSE 0.019 356.000 0.000 NA   NA
 7752417 7752418 CDR20291_0493 CDR20291_0494     TRUE 0.525 116.000 0.000 0.001   NA
 7752418 7752419 CDR20291_0494 CDR20291_0495     FALSE 0.012 423.000 0.000 NA   NA
 7752419 7752420 CDR20291_0495 CDR20291_0496     TRUE 0.985 30.000 0.195 NA   NA
 7752420 7752421 CDR20291_0496 CDR20291_0497     TRUE 0.456 180.000 0.026 NA   NA
 7752421 7752422 CDR20291_0497 CDR20291_0498   thrS FALSE 0.006 770.000 0.000 NA   NA
 7752422 7752423 CDR20291_0498 CDR20291_0499 thrS   FALSE 0.006 768.000 0.000 NA   NA
 7752423 7752424 CDR20291_0499 CDR20291_0500     TRUE 0.958 -1823.000 0.000 NA   NA
 7752425 7752426 CDR20291_0501 CDR20291_0502     TRUE 0.944 -7.000 0.000 NA   NA
 7752428 7752429 CDR20291_0504 CDR20291_0505     FALSE 0.300 107.000 0.000 NA   NA
 7752429 7752430 CDR20291_0505 CDR20291_0506     FALSE 0.030 292.000 0.000 NA   NA
 7752431 7752432 CDR20291_0507 CDR20291_0508 gapN   FALSE 0.017 374.000 0.000 1.000 N NA
 7752432 7752433 CDR20291_0508 CDR20291_0509     TRUE 0.997 -3.000 0.250 1.000 N NA
 7752435 7752436 CDR20291_0511 CDR20291_0512     TRUE 0.862 20.000 0.000 NA   NA
 7752436 7752437 CDR20291_0512 CDR20291_0513     FALSE 0.010 473.000 0.000 NA   NA
 7752437 7752438 CDR20291_0513 CDR20291_0514     FALSE 0.006 675.000 0.000 NA   NA
 7752438 7752439 CDR20291_0514 CDR20291_0515     FALSE 0.004 2203.000 0.000 NA   NA
 7752440 7752441 CDR20291_0516 CDR20291_0517     TRUE 0.983 43.000 0.363 NA   NA
 7752441 7752442 CDR20291_0517 CDR20291_0518     FALSE 0.004 1434.000 0.000 NA   NA
 7752443 7752444 CDR20291_0519 CDR20291_0520     TRUE 0.883 18.000 0.000 1.000   NA
 7752444 7752445 CDR20291_0520 CDR20291_0521     FALSE 0.009 519.000 0.000 NA   NA
 7752445 7752446 CDR20291_0521 CDR20291_0522   cotJB1 TRUE 0.932 0.000 0.000 NA   NA
 7752446 7752447 CDR20291_0522 CDR20291_0523 cotJB1 cotJC1 TRUE 0.883 62.000 0.031 NA   NA
 7752447 7752448 CDR20291_0523 CDR20291_0524 cotJC1 ogt1 FALSE 0.006 818.000 0.000 1.000 N NA
 7752450 7752451 CDR20291_0526 CDR20291_0527     FALSE 0.007 571.000 0.000 NA   NA
 7752451 7752452 CDR20291_0527 CDR20291_0528     TRUE 0.362 96.000 0.000 NA   NA
 7752452 7752453 CDR20291_0528 CDR20291_0529     FALSE 0.096 187.000 0.000 NA   NA
 7752453 7752454 CDR20291_0529 CDR20291_0530     TRUE 0.958 -2138.000 0.000 NA   NA
 7752454 7752455 CDR20291_0530 CDR20291_0531     FALSE 0.003 1638.000 0.000 NA N NA
 7752455 7752456 CDR20291_0531 CDR20291_0532     FALSE 0.019 356.000 0.000 NA   NA
 7752457 7752458 CDR20291_0533 CDR20291_0534     TRUE 0.485 440.000 0.333 NA Y NA
 7752458 7752459 CDR20291_0534 CDR20291_0535     FALSE 0.009 596.000 0.000 1.000   NA
 7752459 7752460 CDR20291_0535 CDR20291_0536     TRUE 0.999 -10.000 0.385 1.000   NA
 7752460 7752461 CDR20291_0536 CDR20291_0537     FALSE 0.004 1275.000 0.000 NA   NA
 7752461 7752462 CDR20291_0537 CDR20291_0538     FALSE 0.317 104.000 0.000 NA   NA
 7752462 7752463 CDR20291_0538 CDR20291_0539     TRUE 0.897 57.000 0.000 0.064 Y NA
 7752463 7752464 CDR20291_0539 CDR20291_0540     FALSE 0.112 178.000 0.000 NA   NA
 7752464 7752465 CDR20291_0540 CDR20291_0541     FALSE 0.042 257.000 0.000 NA   NA
 7752465 7752466 CDR20291_0541 CDR20291_0542     FALSE 0.013 419.000 0.000 NA   NA
 7752466 7752467 CDR20291_0542 CDR20291_0543     FALSE 0.006 692.000 0.000 NA   NA
 7752468 7752469 CDR20291_0544 CDR20291_0545     TRUE 0.867 15.000 0.000 NA   NA
 7752469 7752470 CDR20291_0545 CDR20291_0546     FALSE 0.012 434.000 0.000 NA   NA
 7752470 7752471 CDR20291_0546 CDR20291_0547     FALSE 0.006 706.000 0.000 NA   NA
 7752471 7752472 CDR20291_0547 CDR20291_0548     TRUE 0.449 76.000 0.000 NA   NA
 7752472 7752473 CDR20291_0548 CDR20291_0549     FALSE 0.004 1325.000 0.000 NA   NA
 7752473 7752474 CDR20291_0549 CDR20291_0550     TRUE 0.996 -7.000 0.108 NA   NA
 7752474 7752475 CDR20291_0550 CDR20291_0551     FALSE 0.005 923.000 0.000 NA   NA
 7752476 7752477 CDR20291_0552 CDR20291_0553     FALSE 0.095 189.000 0.000 1.000 N NA
 7752478 7752479 CDR20291_0554 CDR20291_0555     FALSE 0.006 589.000 0.000 NA N NA
 7752479 7752480 CDR20291_0555 CDR20291_0556     FALSE 0.023 324.000 0.000 NA   NA
 7752480 7752481 CDR20291_0556 CDR20291_0557     FALSE 0.251 117.000 0.000 NA   NA
 7752481 7752482 CDR20291_0557 CDR20291_0558     FALSE 0.015 385.000 0.000 1.000 N NA
 7752482 7752483 CDR20291_0558 CDR20291_0559     FALSE 0.013 463.000 0.000 1.000   NA
 7752483 7752484 CDR20291_0559 CDR20291_0560     FALSE 0.183 142.000 0.000 NA   NA
 7752484 7752485 CDR20291_0560 CDR20291_0561     FALSE 0.008 551.000 0.000 NA   NA
 7752485 7752486 CDR20291_0561 CDR20291_0562     FALSE 0.109 180.000 0.000 NA   NA
 7752486 7752487 CDR20291_0562 CDR20291_0563     TRUE 0.404 86.000 0.000 NA   NA
 7752487 7752488 CDR20291_0563 CDR20291_0564     TRUE 0.926 1.000 0.000 NA   NA
 7752488 7752489 CDR20291_0564 CDR20291_0565     FALSE 0.022 1435.000 0.000 1.000 Y NA
 7752489 7752490 CDR20291_0565 CDR20291_0566     TRUE 1.000 0.000 0.750 1.000 Y NA
 7752490 7752491 CDR20291_0566 CDR20291_0567     TRUE 0.932 70.000 0.120 1.000 N NA
 7752491 7752492 CDR20291_0567 CDR20291_0568     TRUE 0.999 -3.000 0.667 NA   NA
 7752492 7752493 CDR20291_0568 CDR20291_0569     FALSE 0.011 445.000 0.000 NA   NA
 7752493 7752494 CDR20291_0569 CDR20291_0570     FALSE 0.006 895.000 0.000 1.000   NA
 7752494 7752495 CDR20291_0570 CDR20291_0571     FALSE 0.035 278.000 0.000 1.000 N NA
 7752495 7752496 CDR20291_0571 CDR20291_0572     TRUE 0.997 17.000 0.071 0.001 Y NA
 7752496 7752497 CDR20291_0572 CDR20291_0573     TRUE 0.863 16.000 0.000 NA   NA
 7752497 7752498 CDR20291_0573 CDR20291_0574     FALSE 0.005 1134.000 0.000 NA   NA
 7752498 7752499 CDR20291_0574 CDR20291_0575     TRUE 0.998 -13.000 0.250 1.000 N NA
 7752499 7752500 CDR20291_0575 CDR20291_0576     TRUE 0.998 3.000 0.600 NA   NA
 7752500 7752501 CDR20291_0576 CDR20291_0577     FALSE 0.005 974.000 0.000 NA   NA
 7752501 7752502 CDR20291_0577 CDR20291_0578     FALSE 0.005 1142.000 0.000 1.000   NA
 7752502 7752503 CDR20291_0578 CDR20291_0579   u2 TRUE 0.952 63.000 0.021 1.000 Y NA
 7752503 7752504 CDR20291_0579 CDR20291_0580 u2 u1 FALSE 0.075 207.000 0.000 1.000 N NA
 7752504 7752505 CDR20291_0580 CDR20291_0581 u1 tcdD FALSE 0.026 909.000 0.000 1.000 Y NA
 7752505 7752506 CDR20291_0581 CDR20291_0582 tcdD tcdB FALSE 0.022 331.000 0.000 NA   NA
 7752506 7752507 CDR20291_0582 CDR20291_0583 tcdB tcdE FALSE 0.232 122.000 0.000 NA   NA
 7752507 7752508 CDR20291_0583 CDR20291_0584 tcdE tcdA FALSE 0.006 728.000 0.000 NA   NA
 7752511 7752512 CDR20291_0587 CDR20291_0588   d2 FALSE 0.005 1034.000 0.000 NA   NA
 7752512 7752513 CDR20291_0588 CDR20291_0589 d2 d3 TRUE 0.993 12.000 0.188 NA   NA
 7752513 7752514 CDR20291_0589 CDR20291_0590 d3 d4 TRUE 0.999 0.000 0.500 NA   NA
 7752515 7752516 CDR20291_0591 CDR20291_0592     TRUE 0.996 45.000 0.643 1.000 Y NA
 7752516 7752517 CDR20291_0592 CDR20291_0593     FALSE 0.004 1589.000 0.000 1.000 N NA
 7752517 7752518 CDR20291_0593 CDR20291_0594     FALSE 0.006 745.000 0.000 NA   NA
 7752518 7752519 CDR20291_0594 CDR20291_0595     FALSE 0.016 377.000 0.000 NA   NA
 7752519 7752520 CDR20291_0595 CDR20291_0596     FALSE 0.005 906.000 0.000 NA   NA
 7752520 7752521 CDR20291_0596 CDR20291_0597     FALSE 0.109 180.000 0.000 NA   NA
 7752521 7752522 CDR20291_0597 CDR20291_0598     FALSE 0.066 217.000 0.000 NA   NA
 7752523 7752524 CDR20291_0599 CDR20291_0600     TRUE 0.998 -3.000 0.273 NA   NA
 7752525 7752526 CDR20291_0601 CDR20291_0602     TRUE 0.992 26.000 0.286 NA   NA
 7752526 7752527 CDR20291_0602 CDR20291_0603     FALSE 0.074 207.000 0.000 NA   NA
 7752527 7752528 CDR20291_0603 CDR20291_0604     FALSE 0.018 359.000 0.000 NA   NA
 7752528 7752529 CDR20291_0604 CDR20291_0605     FALSE 0.083 197.000 0.000 NA   NA
 7752529 7752530 CDR20291_0605 CDR20291_0606     TRUE 0.960 38.000 0.083 NA   NA
 7752530 7752531 CDR20291_0606 CDR20291_0607     TRUE 0.915 88.000 0.143 NA   NA
 7752531 7752532 CDR20291_0607 CDR20291_0608     TRUE 0.805 42.000 0.000 0.030   NA
 7752532 7752533 CDR20291_0608 CDR20291_0609     TRUE 0.748 35.000 0.000 1.000   NA
 7752535 7752536 CDR20291_0611 CDR20291_0612 infC rpmI TRUE 0.999 28.000 0.652 1.000 Y NA
 7752536 7752537 CDR20291_0612 CDR20291_0613 rpmI rplT TRUE 0.998 56.000 0.928 0.014 Y NA
 7752537 7752538 CDR20291_0613 CDR20291_0614 rplT   FALSE 0.031 310.000 0.000 1.000   NA
 7752538 7752539 CDR20291_0614 CDR20291_0615     FALSE 0.014 436.000 0.000 1.000   NA
 7752539 7752540 CDR20291_0615 CDR20291_0616     FALSE 0.168 338.000 0.000 0.002 Y NA
 7752540 7752541 CDR20291_0616 CDR20291_0617     FALSE 0.017 388.000 0.000 1.000   NA
 7752542 7752543 CDR20291_0618 CDR20291_0619     FALSE 0.006 671.000 0.000 NA   NA
 7752546 7752547 CDR20291_0622 CDR20291_0623     TRUE 0.850 311.000 0.500 0.003 Y NA
 7752547 7752548 CDR20291_0623 CDR20291_0624     TRUE 0.350 191.000 0.007 1.000 N NA
 7752548 7752549 CDR20291_0624 CDR20291_0625   pheS FALSE 0.101 619.000 0.006 1.000 Y NA
 7752549 7752550 CDR20291_0625 CDR20291_0626 pheS pheT TRUE 0.999 17.000 0.574 0.001 Y NA
 7752550 7752551 CDR20291_0626 CDR20291_0627 pheT   TRUE 0.986 7.000 0.038 NA   NA
 7752551 7752552 CDR20291_0627 CDR20291_0628     FALSE 0.020 342.000 0.000 NA   NA
 7752552 7752553 CDR20291_0628 CDR20291_0629     FALSE 0.009 492.000 0.000 NA   NA
 7752553 7752554 CDR20291_0629 CDR20291_0630     TRUE 0.357 104.000 0.000 1.000   NA
 7752554 7752555 CDR20291_0630 CDR20291_0631     TRUE 0.759 34.000 0.000 1.000   NA
 7752555 7752556 CDR20291_0631 CDR20291_0632     FALSE 0.009 519.000 0.000 1.000 N NA
 7752556 7752557 CDR20291_0632 CDR20291_0633     FALSE 0.062 223.000 0.000 1.000 N NA
 7752561 7752562 CDR20291_0637 CDR20291_0638 argS   FALSE 0.223 254.000 0.021 NA   NA
 7752562 7752563 CDR20291_0638 CDR20291_0639     FALSE 0.019 347.000 0.000 NA   NA
 7752563 7752564 CDR20291_0639 CDR20291_0640     TRUE 0.979 18.000 0.024 1.000   NA
 7752564 7752565 CDR20291_0640 CDR20291_0641     TRUE 0.404 86.000 0.000 NA   NA
 7752565 7752566 CDR20291_0641 CDR20291_0642     FALSE 0.255 116.000 0.000 NA   NA
 7752566 7752567 CDR20291_0642 CDR20291_0643   cooS FALSE 0.035 607.000 0.000 1.000 Y NA
 7752567 7752568 CDR20291_0643 CDR20291_0644 cooS cooC TRUE 0.374 310.000 0.129 0.046 N NA
 7752568 7752569 CDR20291_0644 CDR20291_0645 cooC fhs FALSE 0.234 249.000 0.019 1.000 N NA
 7752569 7752570 CDR20291_0645 CDR20291_0646 fhs fchA TRUE 0.853 105.000 0.095 1.000 N NA
 7752570 7752571 CDR20291_0646 CDR20291_0647 fchA folD TRUE 0.381 92.000 0.000 1.000 N NA
 7752571 7752572 CDR20291_0647 CDR20291_0648 folD   TRUE 0.684 37.000 0.000 NA   NA
 7752572 7752573 CDR20291_0648 CDR20291_0649     TRUE 0.982 36.000 0.229 NA   NA
 7752573 7752574 CDR20291_0649 CDR20291_0650     TRUE 0.918 44.000 0.029 1.000 N NA
 7752574 7752575 CDR20291_0650 CDR20291_0651     TRUE 0.913 56.000 0.052 1.000 N NA
 7752575 7752576 CDR20291_0651 CDR20291_0652     TRUE 0.990 20.000 0.138 1.000 N NA
 7752576 7752577 CDR20291_0652 CDR20291_0653     TRUE 0.997 31.000 0.222 0.003 Y NA
 7752577 7752578 CDR20291_0653 CDR20291_0654     TRUE 0.612 50.000 0.000 1.000   NA
 7752578 7752579 CDR20291_0654 CDR20291_0655     TRUE 0.578 57.000 0.000 1.000   NA
 7752579 7752580 CDR20291_0655 CDR20291_0656   gcvH TRUE 0.808 87.000 0.020 1.000 N NA
 7752580 7752581 CDR20291_0656 CDR20291_0657 gcvH   TRUE 0.642 46.000 0.000 1.000   NA
 7752581 7752582 CDR20291_0657 CDR20291_0658     TRUE 0.925 25.000 0.000 0.022   NA
 7752582 7752583 CDR20291_0658 CDR20291_0659     TRUE 0.984 -15.000 0.000 0.002   NA
 7752583 7752584 CDR20291_0659 CDR20291_0660     TRUE 0.635 47.000 0.000 1.000   NA
 7752584 7752585 CDR20291_0660 CDR20291_0661     TRUE 0.522 151.000 0.011 NA   NA
 7752585 7752586 CDR20291_0661 CDR20291_0662     TRUE 0.983 19.000 0.055 NA   NA
 7752586 7752587 CDR20291_0662 CDR20291_0663     TRUE 0.997 16.000 0.600 NA   NA
 7752587 7752588 CDR20291_0663 CDR20291_0664   hisK FALSE 0.008 540.000 0.000 NA   NA
 7752591 7752592 CDR20291_0667 CDR20291_0668     FALSE 0.145 158.000 0.000 NA   NA
 7752593 7752594 CDR20291_0669 CDR20291_0670 glpK1   TRUE 0.899 41.000 0.004 1.000 N NA
 10864320 7752596 CDR20291_t52 CDR20291_0672     TRUE 0.398 87.000 0.000 NA   NA
 7752596 7752597 CDR20291_0672 CDR20291_0673     TRUE 0.997 15.000 0.144 1.000 Y NA
 7752597 7752598 CDR20291_0673 CDR20291_0674     FALSE 0.112 178.000 0.000 NA   NA
 7752598 7752599 CDR20291_0674 CDR20291_0675     TRUE 0.377 92.000 0.000 NA   NA
 7752599 7752600 CDR20291_0675 CDR20291_0676     TRUE 0.987 53.000 0.643 NA N NA
 7752600 7752601 CDR20291_0676 CDR20291_0677     TRUE 0.448 77.000 0.000 1.000 N NA
 7752601 7752602 CDR20291_0677 CDR20291_0678     FALSE 0.005 1028.000 0.000 1.000 N NA
 7752602 7752603 CDR20291_0678 CDR20291_0679     TRUE 0.991 28.000 0.022 0.039 Y NA
 7752603 7752604 CDR20291_0679 CDR20291_0680     TRUE 0.995 59.000 0.640 1.000 Y NA
 7752604 7752605 CDR20291_0680 CDR20291_0681   iscS1 FALSE 0.032 648.000 0.000 1.000 Y NA
 7752605 7752606 CDR20291_0681 CDR20291_0682 iscS1 thiI TRUE 0.981 46.000 0.349 1.000 N NA
 7752606 7752607 CDR20291_0682 CDR20291_0683 thiI   FALSE 0.160 141.000 0.000 NA N NA
 7752607 7752608 CDR20291_0683 CDR20291_0684     FALSE 0.041 243.000 0.000 NA N NA
 7752608 7752609 CDR20291_0684 CDR20291_0685     FALSE 0.004 1413.000 0.000 1.000 N NA
 7752610 7752611 CDR20291_0686 CDR20291_0687 plfA plfB TRUE 0.547 160.000 0.032 1.000 N NA
 7752612 7752613 CDR20291_0688 CDR20291_0689     TRUE 0.387 91.000 0.000 1.000 N NA
 7752613 7752614 CDR20291_0689 CDR20291_0690     FALSE 0.158 275.000 0.000 1.000 Y NA
 7752614 7752615 CDR20291_0690 CDR20291_0691   gutM TRUE 0.979 5.000 0.000 NA Y NA
 7752615 7752616 CDR20291_0691 CDR20291_0692 gutM gutA TRUE 0.980 29.000 0.116 NA N NA
 7752616 7752617 CDR20291_0692 CDR20291_0693 gutA srlE TRUE 0.946 64.000 0.070 0.028   NA
 7752617 7752618 CDR20291_0693 CDR20291_0694 srlE srlE' TRUE 0.998 25.000 0.667 0.028   NA
 7752618 7752619 CDR20291_0694 CDR20291_0695 srlE' srlB TRUE 0.988 41.000 0.286 0.028   NA
 7752619 7752620 CDR20291_0695 CDR20291_0696 srlB gutD TRUE 0.872 95.000 0.080 1.000 N NA
 7752620 7752621 CDR20291_0696 CDR20291_0697 gutD   FALSE 0.004 993.000 0.000 NA N NA
 7752621 7752622 CDR20291_0697 CDR20291_0698     FALSE 0.058 226.000 0.000 NA   NA
 7752622 7752623 CDR20291_0698 CDR20291_0699   spoIIAA TRUE 0.437 88.000 0.000 1.000   NA
 7752623 7752624 CDR20291_0699 CDR20291_0700 spoIIAA spoIIAB TRUE 1.000 14.000 0.669 0.001 Y NA
 7752624 7752625 CDR20291_0700 CDR20291_0701 spoIIAB sigF TRUE 0.998 23.000 0.842 1.000 N NA
 7752625 7752626 CDR20291_0701 CDR20291_0702 sigF spoVAC FALSE 0.286 280.000 0.078 NA   NA
 7752626 7752627 CDR20291_0702 CDR20291_0703 spoVAC spoVAD TRUE 0.870 154.000 0.386 NA   NA
 7752627 7752628 CDR20291_0703 CDR20291_0704 spoVAD spoVAE TRUE 0.996 14.000 0.386 NA   NA
 7752628 7752629 CDR20291_0704 CDR20291_0705 spoVAE   FALSE 0.104 183.000 0.000 NA   NA
 7752629 7752630 CDR20291_0705 CDR20291_0706     FALSE 0.016 375.000 0.000 NA   NA
 7752630 7752631 CDR20291_0706 CDR20291_0707     TRUE 0.997 15.000 0.500 NA   NA
 7752631 7752632 CDR20291_0707 CDR20291_0708     TRUE 0.951 -13.000 0.000 NA   NA
 7752632 7752633 CDR20291_0708 CDR20291_0709     TRUE 0.613 44.000 0.000 NA   NA
 7752633 7752634 CDR20291_0709 CDR20291_0710     FALSE 0.020 339.000 0.000 NA   NA
 7752635 7752636 CDR20291_0711 CDR20291_0712     FALSE 0.054 233.000 0.000 1.000 N NA
 7752639 7752640 CDR20291_0715 CDR20291_0716     FALSE 0.143 172.000 0.000 1.000   NA
 7752640 7752641 CDR20291_0716 CDR20291_0717     TRUE 0.966 29.000 0.039 NA   NA
 7752643 7752644 CDR20291_0719 CDR20291_0720     TRUE 0.979 8.000 0.002 1.000   NA
 7752644 7752645 CDR20291_0720 CDR20291_0721     TRUE 0.447 86.000 0.000 1.000   NA
 7752645 7752646 CDR20291_0721 CDR20291_0722     FALSE 0.211 282.000 0.030 1.000   NA
 7752647 7752648 CDR20291_0723 CDR20291_0724     TRUE 0.968 0.000 0.000 0.060   NA
 7752649 7752650 CDR20291_0725 CDR20291_0726 nadE   TRUE 0.802 83.000 0.010 NA   NA
 7752652 7752653 CDR20291_0728 CDR20291_0729     TRUE 0.609 45.000 0.000 1.000 N NA
 7752653 7752654 CDR20291_0729 CDR20291_0730   act TRUE 0.452 76.000 0.000 1.000 N NA
 7752654 7752655 CDR20291_0730 CDR20291_0731 act crt1 FALSE 0.015 608.000 0.000 0.034 N NA
 7752655 7752656 CDR20291_0731 CDR20291_0732 crt1   TRUE 0.889 94.000 0.105 1.000 N NA
 7752656 7752657 CDR20291_0732 CDR20291_0733     FALSE 0.197 137.000 0.000 1.000 N NA
 7752657 7752658 CDR20291_0733 CDR20291_0734     TRUE 0.653 40.000 0.000 1.000 N NA
 7752658 7752659 CDR20291_0734 CDR20291_0735     TRUE 0.998 11.000 0.429 0.046 N NA
 7752659 7752660 CDR20291_0735 CDR20291_0736     TRUE 0.999 11.000 0.600 0.016 Y NA
 7752660 7752661 CDR20291_0736 CDR20291_0737     TRUE 0.953 99.000 0.400 1.000 N NA
 7752662 7752663 CDR20291_0738 CDR20291_0739     FALSE 0.127 169.000 0.000 NA   NA
 7752664 7752665 CDR20291_0740 CDR20291_0741   floX TRUE 0.372 94.000 0.000 NA   NA
 7752665 7752666 CDR20291_0741 CDR20291_0742 floX   FALSE 0.134 176.000 0.000 1.000   NA
 7752666 7752667 CDR20291_0742 CDR20291_0743     TRUE 0.406 175.000 0.000 1.000 Y NA
 7752667 7752668 CDR20291_0743 CDR20291_0744     TRUE 0.876 22.000 0.000 1.000   NA
 7752669 7752670 CDR20291_0745 CDR20291_0746     TRUE 0.790 26.000 0.000 NA N NA
 7752671 7752672 CDR20291_0747 CDR20291_0748     TRUE 0.728 312.000 0.400 1.000 Y NA
 7752672 7752673 CDR20291_0748 CDR20291_0749     TRUE 0.824 28.000 0.000 1.000   NA
 7752673 7752674 CDR20291_0749 CDR20291_0750     FALSE 0.008 637.000 0.000 1.000   NA
 7752674 7752675 CDR20291_0750 CDR20291_0751     TRUE 1.000 -3.000 0.667 1.000 Y NA
 7752675 7752676 CDR20291_0751 CDR20291_0752     FALSE 0.170 148.000 0.000 1.000 N NA
 7752676 7752677 CDR20291_0752 CDR20291_0753     TRUE 0.953 -16.000 0.000 NA   NA
 7752677 7752678 CDR20291_0753 CDR20291_0754     TRUE 0.998 10.000 0.667 NA   NA
 7752678 7752679 CDR20291_0754 CDR20291_0755   rbr FALSE 0.016 377.000 0.000 NA   NA
 7752679 7752680 CDR20291_0755 CDR20291_0756 rbr   TRUE 0.751 32.000 0.000 1.000 N NA
 7752680 7752681 CDR20291_0756 CDR20291_0757   rbo TRUE 0.687 37.000 0.000 1.000 N NA
 7752681 7752682 CDR20291_0757 CDR20291_0758 rbo   TRUE 0.364 127.000 0.000 0.046 N NA
 7752682 7752683 CDR20291_0758 CDR20291_0759     FALSE 0.034 297.000 0.000 1.000   NA
 7752683 7752684 CDR20291_0759 CDR20291_0760     FALSE 0.008 601.000 0.000 1.000   NA
 7752686 7752687 CDR20291_0762 CDR20291_0763     TRUE 0.982 25.000 0.074 1.000 N NA
 7752687 7752688 CDR20291_0763 CDR20291_0764     TRUE 0.995 22.000 0.054 0.054 Y NA
 7752688 7752689 CDR20291_0764 CDR20291_0765     FALSE 0.022 327.000 0.000 1.000 N NA
 7752689 7752690 CDR20291_0765 CDR20291_0766     TRUE 0.759 34.000 0.000 1.000   NA
 7752690 7752691 CDR20291_0766 CDR20291_0767     TRUE 0.476 79.000 0.000 1.000   NA
 7752691 7752692 CDR20291_0767 CDR20291_0768     FALSE 0.109 189.000 0.000 1.000   NA
 7752692 7752693 CDR20291_0768 CDR20291_0769     TRUE 0.796 28.000 0.000 NA   NA
 7752693 7752694 CDR20291_0769 CDR20291_0770     FALSE 0.054 232.000 0.000 NA   NA
 7752694 7752695 CDR20291_0770 CDR20291_0771     TRUE 0.383 99.000 0.000 1.000   NA
 7752695 7752696 CDR20291_0771 CDR20291_0772     FALSE 0.249 128.000 0.000 1.000   NA
 7752696 7752697 CDR20291_0772 CDR20291_0773     TRUE 0.654 44.000 0.000 1.000   NA
 7752697 7752698 CDR20291_0773 CDR20291_0774     TRUE 0.334 101.000 0.000 NA   NA
 7752700 7752701 CDR20291_0776 CDR20291_0777     FALSE 0.055 230.000 0.000 NA   NA
 7752701 7752702 CDR20291_0777 CDR20291_0778     TRUE 0.990 23.000 0.150 NA   NA
 7752702 7752703 CDR20291_0778 CDR20291_0779   abgB2 TRUE 0.416 84.000 0.000 NA   NA
 7752703 7752704 CDR20291_0779 CDR20291_0780 abgB2   TRUE 0.748 35.000 0.000 1.000   NA
 7752705 7752706 CDR20291_0781 CDR20291_0782     TRUE 0.992 3.000 0.074 1.000   NA
 7752707 7752708 CDR20291_0783 CDR20291_0784 oppB oppC TRUE 1.000 -25.000 0.647 0.030 Y NA
 7752708 7752709 CDR20291_0784 CDR20291_0785 oppC oppA TRUE 0.964 113.000 0.167 0.030 Y NA
 7752709 7752710 CDR20291_0785 CDR20291_0786 oppA oppD TRUE 0.992 75.000 0.600 1.000 Y NA
 7752710 7752711 CDR20291_0786 CDR20291_0787 oppD oppF TRUE 0.994 -7.000 0.000 0.002 Y NA
 7752711 7752712 CDR20291_0787 CDR20291_0788 oppF   FALSE 0.018 359.000 0.000 1.000 N NA
 7752712 7752713 CDR20291_0788 CDR20291_0789     FALSE 0.079 215.000 0.000 1.000   NA
 7752713 7752714 CDR20291_0789 CDR20291_0790     FALSE 0.229 135.000 0.000 1.000   NA
 7752714 7752715 CDR20291_0790 CDR20291_0791     TRUE 0.998 16.000 0.143 0.028 Y NA
 7752715 7752716 CDR20291_0791 CDR20291_0792     TRUE 0.997 24.000 0.143 0.032 Y NA
 7752716 7752717 CDR20291_0792 CDR20291_0793     TRUE 0.511 148.000 0.000 1.000 Y NA
 7752717 7752718 CDR20291_0793 CDR20291_0794     FALSE 0.024 317.000 0.000 NA   NA
 7752718 7752719 CDR20291_0794 CDR20291_0795     FALSE 0.077 205.000 0.000 NA   NA
 7752719 7752720 CDR20291_0795 CDR20291_0796     FALSE 0.078 203.000 0.000 NA   NA
 7752722 7752723 CDR20291_0798 CDR20291_0799 modA modB TRUE 0.993 83.000 0.430 0.001 Y NA
 7752723 7752724 CDR20291_0799 CDR20291_0800 modB modC TRUE 0.998 13.000 0.342 1.000 Y NA
 7752724 7752725 CDR20291_0800 CDR20291_0801 modC maa TRUE 0.918 6.000 0.000 1.000   NA
 7752726 7752727 CDR20291_0802 CDR20291_0803     TRUE 0.971 131.000 1.000 NA   NA
 7752727 7752728 CDR20291_0803 CDR20291_0804     TRUE 0.995 1.000 0.118 1.000   NA
 7752728 7752729 CDR20291_0804 CDR20291_0805     FALSE 0.006 809.000 0.000 NA   NA
 7752729 7752730 CDR20291_0805 CDR20291_0806     TRUE 0.986 97.000 1.000 NA   NA
 7752730 7752731 CDR20291_0806 CDR20291_0807     TRUE 0.995 1.000 0.118 1.000   NA
 7752732 7752733 CDR20291_0808 CDR20291_0809   tlpB FALSE 0.005 746.000 0.000 NA N NA
 7752733 7752734 CDR20291_0809 CDR20291_0810 tlpB   FALSE 0.077 191.000 0.000 NA N NA
 7752734 7752735 CDR20291_0810 CDR20291_0811     TRUE 0.966 21.000 0.000 NA Y NA
 7752735 7752736 CDR20291_0811 CDR20291_0812   glgC FALSE 0.006 771.000 0.000 1.000 N NA
 7752736 7752737 CDR20291_0812 CDR20291_0813 glgC glgD TRUE 0.999 2.000 0.309 0.001 Y NA
 7752737 7752738 CDR20291_0813 CDR20291_0814 glgD glgA TRUE 0.995 29.000 0.172 1.000 Y NA
 7752738 7752739 CDR20291_0814 CDR20291_0815 glgA glgP TRUE 0.999 -7.000 0.143 1.000 Y NA
 7752739 7752740 CDR20291_0815 CDR20291_0816 glgP   TRUE 0.999 5.000 0.186 0.029 Y NA
 7752740 7752741 CDR20291_0816 CDR20291_0817     FALSE 0.055 230.000 0.000 1.000 N NA
 7752741 7752742 CDR20291_0817 CDR20291_0818   speA FALSE 0.007 638.000 0.000 1.000 N NA
 7752742 7752743 CDR20291_0818 CDR20291_0819 speA speD TRUE 0.773 87.000 0.000 1.000 Y NA
 7752743 7752744 CDR20291_0819 CDR20291_0820 speD speE TRUE 0.994 30.000 0.161 1.000 Y NA
 7752744 7752745 CDR20291_0820 CDR20291_0821 speE speB TRUE 0.996 11.000 0.077 1.000 Y NA
 7752747 7752748 CDR20291_0823 CDR20291_0824     FALSE 0.104 258.000 0.000 0.015   NA
 7752748 7752749 CDR20291_0824 CDR20291_0825     FALSE 0.232 134.000 0.000 1.000   NA
 7752749 7752750 CDR20291_0825 CDR20291_0826   tlpB FALSE 0.007 642.000 0.000 NA   NA
 7752750 7752751 CDR20291_0826 CDR20291_0827 tlpB   FALSE 0.004 1224.000 0.000 NA   NA
 7752751 7752752 CDR20291_0827 CDR20291_0828     FALSE 0.040 262.000 0.000 NA   NA
 7752752 7752753 CDR20291_0828 CDR20291_0829   dinB FALSE 0.014 390.000 0.000 NA   NA
 7752753 7752754 CDR20291_0829 CDR20291_0830 dinB opuCA FALSE 0.043 256.000 0.000 1.000 N NA
 7752754 7752755 CDR20291_0830 CDR20291_0831 opuCA opuCC TRUE 1.000 -13.000 0.793 0.092 N NA
 7752755 7752756 CDR20291_0831 CDR20291_0832 opuCC   FALSE 0.039 334.000 0.000 0.092 N NA
 7752756 7752757 CDR20291_0832 CDR20291_0833     FALSE 0.215 141.000 0.000 1.000   NA
 7752757 7752758 CDR20291_0833 CDR20291_0834     FALSE 0.015 384.000 0.000 NA   NA
 7752758 7752759 CDR20291_0834 CDR20291_0835     TRUE 0.785 29.000 0.000 NA   NA
 7752759 7752760 CDR20291_0835 CDR20291_0836     TRUE 0.957 34.000 0.045 1.000 N NA
 7752760 7752761 CDR20291_0836 CDR20291_0837     TRUE 0.907 5.000 0.000 NA   NA
 7752761 7752762 CDR20291_0837 CDR20291_0838     FALSE 0.045 250.000 0.000 NA   NA
 7752762 7752763 CDR20291_0838 CDR20291_0839     FALSE 0.322 200.000 0.008 1.000 N NA
 7752763 7752764 CDR20291_0839 CDR20291_0840     TRUE 0.639 118.000 0.008 1.000 N NA
 7752764 7752765 CDR20291_0840 CDR20291_0841     TRUE 0.606 45.000 0.000 NA   NA
 7752765 7752766 CDR20291_0841 CDR20291_0842   leuA FALSE 0.009 518.000 0.000 NA   NA
 7752766 7752767 CDR20291_0842 CDR20291_0843 leuA leuC TRUE 0.887 140.000 0.019 0.001 Y NA
 7752767 7752768 CDR20291_0843 CDR20291_0844 leuC leuD TRUE 0.999 15.000 0.615 0.001 Y NA
 7752768 7752769 CDR20291_0844 CDR20291_0845 leuD leuB TRUE 0.999 7.000 0.191 0.001 Y NA
 7752769 7752770 CDR20291_0845 CDR20291_0846 leuB   FALSE 0.015 363.000 0.000 NA N NA
 7752770 7752771 CDR20291_0846 CDR20291_0847     FALSE 0.014 373.000 0.000 NA N NA
 7752771 7752772 CDR20291_0847 CDR20291_0848   serA TRUE 0.508 240.000 0.110 0.054 N NA
 7752772 7752773 CDR20291_0848 CDR20291_0849 serA   TRUE 0.970 32.000 0.072 NA   NA
 7752773 7752774 CDR20291_0849 CDR20291_0850     FALSE 0.005 818.000 0.000 NA   NA
 7752774 7752775 CDR20291_0850 CDR20291_0851     FALSE 0.101 185.000 0.000 1.000 N NA
 7752775 7752776 CDR20291_0851 CDR20291_0852     TRUE 0.345 106.000 0.000 1.000   NA
 7752776 7752777 CDR20291_0852 CDR20291_0853     TRUE 1.000 -28.000 0.646 0.030   NA
 7752777 7752778 CDR20291_0853 CDR20291_0854     TRUE 0.999 -12.000 0.270 1.000 Y NA
 7752778 7752779 CDR20291_0854 CDR20291_0855     FALSE 0.229 123.000 0.000 NA   NA
 7752779 7752780 CDR20291_0855 CDR20291_0856   fumA FALSE 0.318 197.000 0.006 NA   NA
 7752780 7752781 CDR20291_0856 CDR20291_0857 fumA fumB TRUE 0.999 13.000 0.262 0.001 Y NA
 7752781 7752782 CDR20291_0857 CDR20291_0858 fumB   TRUE 0.940 66.000 0.006 1.000 Y NA
 7752782 7752783 CDR20291_0858 CDR20291_0859     FALSE 0.120 173.000 0.000 NA   NA
 7752783 7752784 CDR20291_0859 CDR20291_0860     FALSE 0.008 526.000 0.000 NA   NA
 7752784 7752785 CDR20291_0860 CDR20291_0861     TRUE 1.000 11.000 0.875 1.000 Y NA
 7752785 7752786 CDR20291_0861 CDR20291_0862     TRUE 0.990 72.000 0.875 1.000 N NA
 7752786 7752787 CDR20291_0862 CDR20291_0863     TRUE 0.999 -3.000 0.875 1.000 N NA
 7752789 7752790 CDR20291_0865 CDR20291_0866   nagA TRUE 0.998 10.000 0.545 1.000 N NA
 7752790 7752791 CDR20291_0866 CDR20291_0867 nagA glmD TRUE 0.985 99.000 0.273 0.001 Y NA
 7752793 7752794 CDR20291_0869 CDR20291_0870     TRUE 1.000 2.000 0.889 1.000 Y NA
 7752794 7752795 CDR20291_0870 CDR20291_0871     TRUE 0.421 205.000 0.000 0.018 Y NA
 7752797 7752798 CDR20291_0873 CDR20291_0874     TRUE 0.999 37.000 0.688 0.004 Y NA
 7752798 7752799 CDR20291_0874 CDR20291_0875     FALSE 0.021 333.000 0.000 NA   NA
 7752799 7752800 CDR20291_0875 CDR20291_0876     FALSE 0.312 105.000 0.000 NA   NA
 7752800 7752801 CDR20291_0876 CDR20291_0877     TRUE 0.863 17.000 0.000 NA   NA
 7752801 7752802 CDR20291_0877 CDR20291_0878     FALSE 0.011 453.000 0.000 NA   NA
 7752802 7752803 CDR20291_0878 CDR20291_0879     FALSE 0.012 436.000 0.000 NA   NA
 7752803 7752804 CDR20291_0879 CDR20291_0880   potA TRUE 0.995 19.000 0.326 1.000 N NA
 7752804 7752805 CDR20291_0880 CDR20291_0881 potA potB TRUE 1.000 2.000 0.928 1.000 Y NA
 7752805 7752806 CDR20291_0881 CDR20291_0882 potB potC TRUE 0.988 105.000 0.492 0.030 Y NA
 7752806 7752807 CDR20291_0882 CDR20291_0883 potC potD TRUE 0.999 0.000 0.131 0.030 Y NA
 7752807 7752808 CDR20291_0883 CDR20291_0884 potD   FALSE 0.012 444.000 0.000 1.000 N NA
 7752808 7752809 CDR20291_0884 CDR20291_0885     TRUE 0.995 -7.000 0.067 1.000   NA
 7752809 7752810 CDR20291_0885 CDR20291_0886     TRUE 0.909 49.000 0.033 NA   NA
 7752810 7752811 CDR20291_0886 CDR20291_0887     TRUE 0.992 23.000 0.230 NA   NA
 7752811 7752812 CDR20291_0887 CDR20291_0888     TRUE 0.576 49.000 0.000 NA   NA
 7752812 7752813 CDR20291_0888 CDR20291_0889   mnaA FALSE 0.128 168.000 0.000 NA   NA
 7752813 7752814 CDR20291_0889 CDR20291_0890 mnaA   TRUE 0.442 78.000 0.000 1.000 N NA
 7752814 7752815 CDR20291_0890 CDR20291_r12   16SrRNA FALSE 0.159 152.000 0.000 NA   NA
 7752815 7752816 CDR20291_r12 CDR20291_r13 16SrRNA 23SrRNA FALSE 0.029 294.000 0.000 NA   NA
 7752816 10864321 CDR20291_r13 CDR20291_t53 23SrRNA   TRUE 0.660 39.000 0.000 NA   NA
 10864321 7752817 CDR20291_t53 CDR20291_r14   5SrRNA TRUE 0.899 8.000 0.000 NA   NA
 7752817 7752818 CDR20291_r14 CDR20291_0891 5SrRNA   FALSE 0.044 253.000 0.000 NA   NA
 7752818 7752819 CDR20291_0891 CDR20291_0892     FALSE 0.081 492.000 0.000 0.004 Y NA
 7752819 7752820 CDR20291_0892 CDR20291_0893     FALSE 0.056 228.000 0.000 NA   NA
 7752820 7752821 CDR20291_0893 CDR20291_0894     TRUE 0.996 -7.000 0.123 NA   NA
 7752821 7752822 CDR20291_0894 CDR20291_0895     TRUE 0.877 109.000 0.154 NA   NA
 7752822 7752823 CDR20291_0895 CDR20291_0896   addB TRUE 0.992 -10.000 0.029 NA   NA
 7752823 7752824 CDR20291_0896 CDR20291_0897 addB addA TRUE 0.999 0.000 0.408 1.000 Y NA
 7752824 7752825 CDR20291_0897 CDR20291_0898 addA sbcD TRUE 0.972 46.000 0.041 1.000 Y NA
 7752825 7752826 CDR20291_0898 CDR20291_0899 sbcD sbcC TRUE 0.999 -25.000 0.669 NA N NA
 7752826 7752827 CDR20291_0899 CDR20291_0900 sbcC   FALSE 0.209 131.000 0.000 NA   NA
 7752827 7752828 CDR20291_0900 CDR20291_0901     FALSE 0.165 149.000 0.000 NA   NA
 7752828 7752829 CDR20291_0901 CDR20291_0902   pepT TRUE 0.384 91.000 0.000 NA   NA
 7752829 7752830 CDR20291_0902 CDR20291_0903 pepT   FALSE 0.041 258.000 0.000 NA   NA
 7752831 7752832 CDR20291_0904 CDR20291_0905     TRUE 0.975 25.000 0.031 1.000   NA
 7752833 7752834 CDR20291_0906 CDR20291_0907     TRUE 0.999 -12.000 0.400 NA   NA
 7752834 7752835 CDR20291_0907 CDR20291_0908     TRUE 0.989 52.000 0.667 NA   NA
 7752835 7752836 CDR20291_0908 CDR20291_0909     TRUE 0.806 79.000 0.008 NA   NA
 7752836 7752837 CDR20291_0909 CDR20291_0910   bcd2 FALSE 0.006 708.000 0.000 NA   NA
 7752837 7752838 CDR20291_0910 CDR20291_0911 bcd2 etfB2 TRUE 0.763 44.000 0.000 0.045 N NA
 7752838 7752839 CDR20291_0911 CDR20291_0912 etfB2 etfA2 TRUE 1.000 19.000 1.000 0.015 Y NA
 7752839 7752840 CDR20291_0912 CDR20291_0913 etfA2 crt2 TRUE 0.865 19.000 0.000 1.000 N NA
 7752840 7752841 CDR20291_0913 CDR20291_0914 crt2 hbd TRUE 0.985 98.000 0.486 1.000 Y NA
 7752841 7752842 CDR20291_0914 CDR20291_0915 hbd thlA1 TRUE 0.959 72.000 0.054 1.000 Y NA
 7752842 7752843 CDR20291_0915 CDR20291_0916 thlA1   FALSE 0.045 252.000 0.000 1.000 N NA
 7752843 7752844 CDR20291_0916 CDR20291_0917     TRUE 0.986 14.000 0.070 NA   NA
 7752846 7752847 CDR20291_0919 CDR20291_0920     TRUE 0.584 48.000 0.000 NA   NA
 7752847 7752848 CDR20291_0920 CDR20291_0921     FALSE 0.106 182.000 0.000 NA   NA
 7752848 7752849 CDR20291_0921 CDR20291_0922     TRUE 0.725 34.000 0.000 NA   NA
 7752849 7752850 CDR20291_0922 CDR20291_0923   ccpA FALSE 0.047 247.000 0.000 NA   NA
 7752852 7752853 CDR20291_0925 CDR20291_0926     FALSE 0.010 478.000 0.000 NA   NA
 7752854 7752855 CDR20291_0927 CDR20291_0928     TRUE 0.637 42.000 0.000 1.000 N NA
 7752856 7752857 CDR20291_0929 CDR20291_0930     TRUE 0.963 29.000 0.029 NA   NA
 7752857 7752858 CDR20291_0930 CDR20291_0931     TRUE 0.974 20.000 0.014 NA   NA
 7752858 7752859 CDR20291_0931 CDR20291_0932     FALSE 0.067 216.000 0.000 1.000 N NA
 7752859 7752860 CDR20291_0932 CDR20291_0933     TRUE 0.996 26.000 0.500 1.000 N NA
 7752860 7752861 CDR20291_0933 CDR20291_0934     TRUE 0.998 4.000 0.400 1.000   NA
 7752861 7752862 CDR20291_0934 CDR20291_0935     TRUE 0.993 0.000 0.057 1.000   NA
 7752862 7752863 CDR20291_0935 CDR20291_0936     TRUE 1.000 11.000 0.800 0.046 Y NA
 7752863 7752864 CDR20291_0936 CDR20291_0937     TRUE 0.999 -16.000 0.103 0.046 Y NA
 7752866 7752867 CDR20291_0939 CDR20291_0940   moeA FALSE 0.071 211.000 0.000 NA   NA
 7752867 7752868 CDR20291_0940 CDR20291_0941 moeA mobB TRUE 0.997 5.000 0.040 0.003 Y NA
 7752868 7752869 CDR20291_0941 CDR20291_0942 mobB   FALSE 0.244 119.000 0.000 1.000 N NA
 7752869 7752870 CDR20291_0942 CDR20291_0943     FALSE 0.043 256.000 0.000 1.000 N NA
 7752870 7752871 CDR20291_0943 CDR20291_0944     FALSE 0.015 363.000 0.000 NA N NA
 7752871 7752872 CDR20291_0944 CDR20291_0945     TRUE 0.979 36.000 0.200 NA   NA
 7752872 7752873 CDR20291_0945 CDR20291_0946   zupT FALSE 0.211 142.000 0.000 1.000   NA
 7752873 7752874 CDR20291_0946 CDR20291_0947 zupT   TRUE 0.362 96.000 0.000 NA   NA
 7752874 7752875 CDR20291_0947 CDR20291_0948     FALSE 0.045 251.000 0.000 NA   NA
 7752875 7752876 CDR20291_0948 CDR20291_0949     TRUE 0.941 -6.000 0.000 NA   NA
 7752876 7752877 CDR20291_0949 CDR20291_0950     FALSE 0.058 226.000 0.000 NA   NA
 7752877 7752878 CDR20291_0950 CDR20291_0951   dhaB1 FALSE 0.064 219.000 0.000 NA   NA
 7752878 7752879 CDR20291_0951 CDR20291_0952 dhaB1 dhaB2 TRUE 0.999 15.000 1.000 0.003 N NA
 7752879 7752880 CDR20291_0952 CDR20291_0953 dhaB2   TRUE 0.882 20.000 0.000 1.000   NA
 7752880 7752881 CDR20291_0953 CDR20291_0954     FALSE 0.156 164.000 0.000 1.000   NA
 7752881 7752882 CDR20291_0954 CDR20291_0955     FALSE 0.134 164.000 0.000 NA   NA
 7752882 7752883 CDR20291_0955 CDR20291_0956     FALSE 0.009 501.000 0.000 NA   NA
 7752883 7752884 CDR20291_0956 CDR20291_0957     FALSE 0.009 506.000 0.000 NA   NA
 7752884 7752885 CDR20291_0957 CDR20291_0958     FALSE 0.068 226.000 0.000 1.000   NA
 7752885 7752886 CDR20291_0958 CDR20291_0959     FALSE 0.005 1073.000 0.000 NA   NA
 7752886 7752887 CDR20291_0959 CDR20291_0960     FALSE 0.143 159.000 0.000 NA   NA
 7752888 7752889 CDR20291_0961 CDR20291_0962     TRUE 0.990 48.000 0.667 NA   NA
 7752889 7752890 CDR20291_0962 CDR20291_0963     TRUE 0.999 16.000 1.000 NA   NA
 7752890 10864322 CDR20291_0963 CDR20291_t54     FALSE 0.004 1376.000 0.000 NA   NA
 7752891 7752892 CDR20291_0964 CDR20291_0965 polA coaE TRUE 0.989 9.000 0.068 1.000 N NA
 7752892 7752893 CDR20291_0965 CDR20291_0966 coaE   TRUE 0.994 -7.000 0.058 NA   NA
 7752893 7752894 CDR20291_0966 CDR20291_0967     TRUE 0.992 0.000 0.055 NA   NA
 7752894 7752895 CDR20291_0967 CDR20291_0968     TRUE 0.910 73.000 0.080 1.000 N NA
 7752895 7752896 CDR20291_0968 CDR20291_0969     FALSE 0.080 201.000 0.000 NA   NA
 7752896 7752897 CDR20291_0969 CDR20291_0970   gloA FALSE 0.056 228.000 0.000 NA   NA
 7752897 7752898 CDR20291_0970 CDR20291_0971 gloA   TRUE 0.612 123.000 0.012 NA N NA
 7752898 7752899 CDR20291_0971 CDR20291_0972     TRUE 0.938 111.000 0.400 NA   NA
 7752899 7752900 CDR20291_0972 CDR20291_0973   rnfC FALSE 0.066 216.000 0.000 NA   NA
 7752900 7752901 CDR20291_0973 CDR20291_0974 rnfC rnfD TRUE 0.997 23.000 0.147 0.045 Y NA
 7752901 7752902 CDR20291_0974 CDR20291_0975 rnfD rnfG TRUE 1.000 0.000 0.678 0.045 Y NA
 7752902 7752903 CDR20291_0975 CDR20291_0976 rnfG rnfE TRUE 0.996 13.000 0.050 0.045 Y NA
 7752903 7752904 CDR20291_0976 CDR20291_0977 rnfE rnfA TRUE 0.997 15.000 0.105 0.045 Y NA
 7752904 7752905 CDR20291_0977 CDR20291_0978 rnfA rnfB TRUE 0.998 16.000 0.221 0.045 Y NA
 7752907 7752908 CDR20291_0980 CDR20291_0981 maf radC TRUE 0.941 45.000 0.074 NA N NA
 7752908 7752909 CDR20291_0981 CDR20291_0982 radC mreB2 TRUE 0.880 70.000 0.040 1.000 N NA
 7752909 7752910 CDR20291_0982 CDR20291_0983 mreB2 mreC TRUE 0.998 10.000 0.689 1.000 N NA
 7752910 7752911 CDR20291_0983 CDR20291_0984 mreC   TRUE 0.998 15.000 0.550 0.003   NA
 7752911 7752912 CDR20291_0984 CDR20291_0985     TRUE 0.990 12.000 0.089 1.000   NA
 7752912 7752913 CDR20291_0985 CDR20291_0986   minC TRUE 0.851 98.000 0.060 1.000   NA
 7752913 7752914 CDR20291_0986 CDR20291_0987 minC divIVB TRUE 0.998 24.000 0.368 1.000 Y NA
 7752914 7752915 CDR20291_0987 CDR20291_0988 divIVB minE TRUE 0.998 18.000 0.347 NA Y NA
 7752915 7752916 CDR20291_0988 CDR20291_0989 minE mrdB TRUE 0.919 85.000 0.013 NA Y NA
 7752916 7752917 CDR20291_0989 CDR20291_0990 mrdB mgsA TRUE 0.908 41.000 0.009 1.000 N NA
 7752917 7752918 CDR20291_0990 CDR20291_0991 mgsA   FALSE 0.008 485.000 0.000 NA N NA
 7752918 7752919 CDR20291_0991 CDR20291_0992     TRUE 0.910 4.000 0.000 NA   NA
 7752919 7752920 CDR20291_0992 CDR20291_0993     FALSE 0.009 504.000 0.000 NA   NA
 7752922 7752923 CDR20291_0995 CDR20291_0996     TRUE 0.998 2.000 0.420 NA   NA
 7752923 7752924 CDR20291_0996 CDR20291_0997   cafA TRUE 0.992 18.000 0.180 NA   NA
 7752924 7752925 CDR20291_0997 CDR20291_0998 cafA rplU TRUE 0.904 101.000 0.018 1.000 Y NA
 7752925 7752926 CDR20291_0998 CDR20291_0999 rplU   TRUE 0.997 15.000 0.208 NA Y NA
 7752926 7752927 CDR20291_0999 CDR20291_1000   rpmA TRUE 0.997 14.000 0.203 NA Y NA
 7752927 7752928 CDR20291_1000 CDR20291_1001 rpmA obg TRUE 0.946 102.000 0.335 1.000   NA
 7752928 7752929 CDR20291_1001 CDR20291_1002 obg   TRUE 0.916 52.000 0.046 NA   NA
 7752929 7752930 CDR20291_1002 CDR20291_1003   hom1 FALSE 0.023 301.000 0.000 NA N NA
 7752931 7752932 CDR20291_1004 CDR20291_1005     FALSE 0.037 268.000 0.000 NA   NA
 7752933 7752934 CDR20291_1006 CDR20291_1007     FALSE 0.246 118.000 0.000 NA   NA
 7752934 7752935 CDR20291_1007 CDR20291_1008   etfB3 TRUE 0.988 17.000 0.098 NA   NA
 7752935 7752936 CDR20291_1008 CDR20291_1009 etfB3 etfA3 TRUE 1.000 14.000 0.875 0.015 Y NA
 7752936 7752937 CDR20291_1009 CDR20291_1010 etfA3   TRUE 1.000 11.000 0.875 0.009 Y NA
 7752939 7752940 CDR20291_1012 CDR20291_1013 ackA   TRUE 0.855 93.000 0.061 NA   NA
 7752940 7752941 CDR20291_1013 CDR20291_1014   rpmF TRUE 0.997 25.000 0.599 NA   NA
 7752941 7752942 CDR20291_1014 CDR20291_1015 rpmF fapR FALSE 0.320 207.000 0.007 1.000   NA
 7752942 7752943 CDR20291_1015 CDR20291_1016 fapR plsX TRUE 0.980 11.000 0.012 1.000   NA
 7752943 7752944 CDR20291_1016 CDR20291_1017 plsX fabH TRUE 0.995 26.000 0.054 0.004 Y NA
 7752944 7752945 CDR20291_1017 CDR20291_1018 fabH fabK TRUE 0.903 109.000 0.216 1.000   NA
 7752945 7752946 CDR20291_1018 CDR20291_1019 fabK fabD TRUE 0.989 16.000 0.099 1.000   NA
 7752946 7752947 CDR20291_1019 CDR20291_1020 fabD fabG TRUE 0.999 0.000 0.149 0.004 Y NA
 7752947 7752948 CDR20291_1020 CDR20291_1021 fabG acpP TRUE 0.973 54.000 0.014 0.004 Y NA
 7752948 7752949 CDR20291_1021 CDR20291_1022 acpP fabF TRUE 0.983 29.000 0.005 1.000 Y NA
 7752949 7752950 CDR20291_1022 CDR20291_1023 fabF   FALSE 0.059 226.000 0.000 1.000 N NA
 7752950 7752951 CDR20291_1023 CDR20291_1024     TRUE 0.942 31.000 0.000 1.000 Y NA
 7752951 7752952 CDR20291_1024 CDR20291_1025     FALSE 0.020 345.000 0.000 NA   NA
 7752952 7752953 CDR20291_1025 CDR20291_1026     TRUE 0.714 35.000 0.000 NA   NA
 7752953 7752954 CDR20291_1026 CDR20291_1027     TRUE 0.876 22.000 0.000 1.000   NA
 7752954 7752955 CDR20291_1027 CDR20291_1028     FALSE 0.028 299.000 0.000 1.000 N NA
 7752955 7752956 CDR20291_1028 CDR20291_1029   fbp TRUE 0.394 89.000 0.000 1.000 N NA
 7752956 7752957 CDR20291_1029 CDR20291_1030 fbp spoIIIAA FALSE 0.071 224.000 0.000 1.000   NA
 7752957 7752958 CDR20291_1030 CDR20291_1031 spoIIIAA spoIIIAB TRUE 0.999 -10.000 0.604 NA   NA
 7752958 7752959 CDR20291_1031 CDR20291_1032 spoIIIAB spoIIIAC TRUE 0.999 2.000 0.926 NA   NA
 7752959 7752960 CDR20291_1032 CDR20291_1033 spoIIIAC spoIIIAD TRUE 0.999 16.000 0.895 NA   NA
 7752960 7752961 CDR20291_1033 CDR20291_1034 spoIIIAD spoIIIAE TRUE 0.987 85.000 0.864 NA   NA
 7752961 7752962 CDR20291_1034 CDR20291_1035 spoIIIAE spoiIIIAF TRUE 0.992 60.000 0.918 NA   NA
 7752962 7752963 CDR20291_1035 CDR20291_1036 spoiIIIAF spoIIIAG TRUE 0.999 12.000 0.907 NA   NA
 7752963 7752964 CDR20291_1036 CDR20291_1037 spoIIIAG spoIIIAH TRUE 0.994 27.000 0.407 NA   NA
 7752964 7752965 CDR20291_1037 CDR20291_1038 spoIIIAH   TRUE 0.845 110.000 0.108 NA   NA
 7752965 7752966 CDR20291_1038 CDR20291_1039   nusB TRUE 0.940 85.000 0.223 NA   NA
 7752966 7752967 CDR20291_1039 CDR20291_1040 nusB gcp TRUE 0.991 -16.000 0.011 1.000 N NA
 7752967 7752968 CDR20291_1040 CDR20291_1041 gcp xseA TRUE 0.989 -3.000 0.012 1.000 N NA
 7752968 7752969 CDR20291_1041 CDR20291_1042 xseA xseB TRUE 1.000 2.000 0.412 0.001 Y NA
 7752969 7752970 CDR20291_1042 CDR20291_1043 xseB ispA TRUE 0.990 3.000 0.053 1.000 N NA
 7752970 7752971 CDR20291_1043 CDR20291_1044 ispA   TRUE 0.964 30.000 0.040 NA   NA
 7752971 7752972 CDR20291_1044 CDR20291_1045   dxs TRUE 0.943 34.000 0.019 NA   NA
 7752972 7752973 CDR20291_1045 CDR20291_1046 dxs   TRUE 0.836 133.000 0.189 1.000 N NA
 7752973 7752974 CDR20291_1046 CDR20291_1047   recN TRUE 0.927 38.000 0.017 1.000 N NA
 7752974 7752975 CDR20291_1047 CDR20291_1048 recN   FALSE 0.067 215.000 0.000 NA   NA
 7752976 7752977 CDR20291_1049 CDR20291_1050   bltD TRUE 0.875 31.000 0.000 0.052   NA
 7752978 7752979 CDR20291_1051 CDR20291_1052 spoIVB spo0A TRUE 0.900 142.000 0.393 1.000   NA
 7752979 7752980 CDR20291_1052 CDR20291_1053 spo0A   FALSE 0.156 413.000 0.099 1.000   NA
 7752980 7752981 CDR20291_1053 CDR20291_1054     TRUE 0.998 18.000 0.798 NA   NA
 7752981 7752982 CDR20291_1054 CDR20291_1055     TRUE 0.993 24.000 0.259 NA   NA
 7752982 7752983 CDR20291_1055 CDR20291_1056     TRUE 0.980 8.000 0.008 NA   NA
 7752983 7752984 CDR20291_1056 CDR20291_1057     TRUE 0.980 5.000 0.004 NA   NA
 7752984 7752985 CDR20291_1057 CDR20291_1058   nudF TRUE 0.989 2.000 0.038 NA   NA
 7752985 7752986 CDR20291_1058 CDR20291_1059 nudF   TRUE 0.826 68.000 0.004 NA   NA
 7752986 7752987 CDR20291_1059 CDR20291_1060   xerD1 TRUE 0.973 12.000 0.003 NA   NA
 7752987 7752988 CDR20291_1060 CDR20291_1061 xerD1 deoB TRUE 0.921 42.000 0.024 1.000 N NA
 7752988 7752989 CDR20291_1061 CDR20291_1062 deoB deoD TRUE 0.959 47.000 0.135 1.000 N NA
 7752989 7752990 CDR20291_1062 CDR20291_1063 deoD deoA TRUE 0.687 189.000 0.031 1.000 Y NA
 7752990 7752991 CDR20291_1063 CDR20291_1064 deoA   FALSE 0.070 213.000 0.000 NA   NA
 7752991 7752992 CDR20291_1064 CDR20291_1065     TRUE 0.545 172.000 0.047 NA   NA
 7752992 7752993 CDR20291_1065 CDR20291_1066     TRUE 0.997 -13.000 0.146 1.000   NA
 7752993 7752994 CDR20291_1066 CDR20291_1067     TRUE 0.849 72.000 0.020 1.000 N NA
 7752995 7752996 CDR20291_1068 CDR20291_1069     FALSE 0.017 392.000 0.000 1.000   NA
 7752997 7752998 CDR20291_1070 CDR20291_1071     FALSE 0.031 310.000 0.000 1.000   NA
 7752998 7752999 CDR20291_1071 CDR20291_1072     TRUE 0.988 -6.000 0.000 1.000 Y NA
 7752999 7753000 CDR20291_1072 CDR20291_1073     FALSE 0.004 3483.000 0.000 NA   NA
 11405331 7752999   CDR20291_1072     FALSE NA 908.000 0.000 NA   NA
 11547694 7752999   CDR20291_1072     FALSE NA 908.000 0.000 NA   NA
 11690086 7752999   CDR20291_1072     FALSE NA 908.000 0.000 NA   NA
 11405332 7752999   CDR20291_1072     FALSE NA 937.000 0.000 NA   NA
 11547695 7752999   CDR20291_1072     FALSE NA 937.000 0.000 NA   NA
 11690087 7752999   CDR20291_1072     FALSE NA 937.000 0.000 NA   NA
 11405333 7752999   CDR20291_1072     FALSE NA 974.000 0.000 NA   NA
 11547696 7752999   CDR20291_1072     FALSE NA 974.000 0.000 NA   NA
 11690088 7752999   CDR20291_1072     FALSE NA 974.000 0.000 NA   NA
 11405334 7752999   CDR20291_1072     FALSE NA 1003.000 0.000 NA   NA
 11547697 7752999   CDR20291_1072     FALSE NA 1003.000 0.000 NA   NA
 11690089 7752999   CDR20291_1072     FALSE NA 1003.000 0.000 NA   NA
 11405335 7752999   CDR20291_1072     FALSE NA 1041.000 0.000 NA   NA
 11547698 7752999   CDR20291_1072     FALSE NA 1041.000 0.000 NA   NA
 11690090 7752999   CDR20291_1072     FALSE NA 1041.000 0.000 NA   NA
 11405336 7752999   CDR20291_1072     FALSE NA 1070.000 0.000 NA   NA
 11547699 7752999   CDR20291_1072     FALSE NA 1070.000 0.000 NA   NA
 11690091 7752999   CDR20291_1072     FALSE NA 1070.000 0.000 NA   NA
 11405337 7752999   CDR20291_1072     FALSE NA 1105.000 0.000 NA   NA
 11547700 7752999   CDR20291_1072     FALSE NA 1105.000 0.000 NA   NA
 11690092 7752999   CDR20291_1072     FALSE NA 1105.000 0.000 NA   NA
 11405338 7752999   CDR20291_1072     FALSE NA 1134.000 0.000 NA   NA
 11547701 7752999   CDR20291_1072     FALSE NA 1134.000 0.000 NA   NA
 11690093 7752999   CDR20291_1072     FALSE NA 1134.000 0.000 NA   NA
 11405339 7752999   CDR20291_1072     FALSE NA 1173.000 0.000 NA   NA
 11547702 7752999   CDR20291_1072     FALSE NA 1173.000 0.000 NA   NA
 11690094 7752999   CDR20291_1072     FALSE NA 1173.000 0.000 NA   NA
 11405340 7752999   CDR20291_1072     FALSE NA 1202.000 0.000 NA   NA
 11547703 7752999   CDR20291_1072     FALSE NA 1202.000 0.000 NA   NA
 11690095 7752999   CDR20291_1072     FALSE NA 1202.000 0.000 NA   NA
 11405341 7752999   CDR20291_1072     FALSE NA 1239.000 0.000 NA   NA
 11547704 7752999   CDR20291_1072     FALSE NA 1239.000 0.000 NA   NA
 11690096 7752999   CDR20291_1072     FALSE NA 1239.000 0.000 NA   NA
 11405342 7752999   CDR20291_1072     FALSE NA 1268.000 0.000 NA   NA
 11547705 7752999   CDR20291_1072     FALSE NA 1268.000 0.000 NA   NA
 11690097 7752999   CDR20291_1072     FALSE NA 1268.000 0.000 NA   NA
 11405343 7752999   CDR20291_1072     FALSE NA 1307.000 0.000 NA   NA
 11547706 7752999   CDR20291_1072     FALSE NA 1307.000 0.000 NA   NA
 11690098 7752999   CDR20291_1072     FALSE NA 1307.000 0.000 NA   NA
 11405344 7752999   CDR20291_1072     FALSE NA 1336.000 0.000 NA   NA
 11547707 7752999   CDR20291_1072     FALSE NA 1336.000 0.000 NA   NA
 11690099 7752999   CDR20291_1072     FALSE NA 1336.000 0.000 NA   NA
 11405345 7752999   CDR20291_1072     FALSE NA 1374.000 0.000 NA   NA
 11547708 7752999   CDR20291_1072     FALSE NA 1374.000 0.000 NA   NA
 11690100 7752999   CDR20291_1072     FALSE NA 1374.000 0.000 NA   NA
 11405346 7752999   CDR20291_1072     FALSE NA 1403.000 0.000 NA   NA
 11547709 7752999   CDR20291_1072     FALSE NA 1403.000 0.000 NA   NA
 11690101 7752999   CDR20291_1072     FALSE NA 1403.000 0.000 NA   NA
 11405347 7752999   CDR20291_1072     FALSE NA 1440.000 0.000 NA   NA
 11547710 7752999   CDR20291_1072     FALSE NA 1440.000 0.000 NA   NA
 11690102 7752999   CDR20291_1072     FALSE NA 1440.000 0.000 NA   NA
 11405348 7752999   CDR20291_1072     FALSE NA 1469.000 0.000 NA   NA
 11547711 7752999   CDR20291_1072     FALSE NA 1469.000 0.000 NA   NA
 11690103 7752999   CDR20291_1072     FALSE NA 1469.000 0.000 NA   NA
 11405349 7752999   CDR20291_1072     FALSE NA 1506.000 0.000 NA   NA
 11547712 7752999   CDR20291_1072     FALSE NA 1506.000 0.000 NA   NA
 11690104 7752999   CDR20291_1072     FALSE NA 1506.000 0.000 NA   NA
 11405350 7752999   CDR20291_1072     FALSE NA 1535.000 0.000 NA   NA
 11547713 7752999   CDR20291_1072     FALSE NA 1535.000 0.000 NA   NA
 11690105 7752999   CDR20291_1072     FALSE NA 1535.000 0.000 NA   NA
 11405351 7752999   CDR20291_1072     FALSE NA 1572.000 0.000 NA   NA
 11547714 7752999   CDR20291_1072     FALSE NA 1572.000 0.000 NA   NA
 11690106 7752999   CDR20291_1072     FALSE NA 1572.000 0.000 NA   NA
 11405352 7752999   CDR20291_1072     FALSE NA 1601.000 0.000 NA   NA
 11547715 7752999   CDR20291_1072     FALSE NA 1601.000 0.000 NA   NA
 11690107 7752999   CDR20291_1072     FALSE NA 1601.000 0.000 NA   NA
 11405353 7752999   CDR20291_1072     FALSE NA 1638.000 0.000 NA   NA
 11547716 7752999   CDR20291_1072     FALSE NA 1638.000 0.000 NA   NA
 11690108 7752999   CDR20291_1072     FALSE NA 1638.000 0.000 NA   NA
 11405354 7752999   CDR20291_1072     FALSE NA 1667.000 0.000 NA   NA
 11547717 7752999   CDR20291_1072     FALSE NA 1667.000 0.000 NA   NA
 11690109 7752999   CDR20291_1072     FALSE NA 1667.000 0.000 NA   NA
 11405355 7752999   CDR20291_1072     FALSE NA 1705.000 0.000 NA   NA
 11547718 7752999   CDR20291_1072     FALSE NA 1705.000 0.000 NA   NA
 11690110 7752999   CDR20291_1072     FALSE NA 1705.000 0.000 NA   NA
 11405356 7752999   CDR20291_1072     FALSE NA 1734.000 0.000 NA   NA
 11547719 7752999   CDR20291_1072     FALSE NA 1734.000 0.000 NA   NA
 11690111 7752999   CDR20291_1072     FALSE NA 1734.000 0.000 NA   NA
 11405357 7752999   CDR20291_1072     FALSE NA 1771.000 0.000 NA   NA
 11547720 7752999   CDR20291_1072     FALSE NA 1771.000 0.000 NA   NA
 11690112 7752999   CDR20291_1072     FALSE NA 1771.000 0.000 NA   NA
 11405358 7752999   CDR20291_1072     FALSE NA 1800.000 0.000 NA   NA
 11547721 7752999   CDR20291_1072     FALSE NA 1800.000 0.000 NA   NA
 11690113 7752999   CDR20291_1072     FALSE NA 1800.000 0.000 NA   NA
 11405359 7752999   CDR20291_1072     FALSE NA 1837.000 0.000 NA   NA
 11547722 7752999   CDR20291_1072     FALSE NA 1837.000 0.000 NA   NA
 11690114 7752999   CDR20291_1072     FALSE NA 1837.000 0.000 NA   NA
 7753002 7753003 CDR20291_1075 CDR20291_1076     TRUE 0.867 15.000 0.000 NA   NA
 7753004 7753005 CDR20291_1077 CDR20291_1078     FALSE 0.030 292.000 0.000 NA   NA
 7753008 7753009 CDR20291_1081 CDR20291_1082     TRUE 1.000 -16.000 1.000 NA   NA
 7753009 7753010 CDR20291_1082 CDR20291_1083     TRUE 0.998 -7.000 0.400 NA   NA
 7753010 7753011 CDR20291_1083 CDR20291_1084     TRUE 0.999 -10.000 0.600 NA   NA
 7753011 7753012 CDR20291_1084 CDR20291_1085   efp FALSE 0.028 297.000 0.000 NA   NA
 7753012 7753013 CDR20291_1085 CDR20291_1086 efp   TRUE 0.823 92.000 0.037 NA   NA
 7753013 7753014 CDR20291_1086 CDR20291_1087   rnc TRUE 0.423 163.000 0.002 NA   NA
 7753014 7753015 CDR20291_1087 CDR20291_1088 rnc   TRUE 0.972 54.000 0.064 1.000 Y NA
 7753015 7753016 CDR20291_1088 CDR20291_1089   smc TRUE 0.964 28.000 0.027 1.000 N NA
 7753016 7753017 CDR20291_1089 CDR20291_1090 smc ftsY TRUE 0.987 27.000 0.165 1.000 N NA
 7753017 7753018 CDR20291_1090 CDR20291_1091 ftsY   TRUE 0.363 103.000 0.000 1.000   NA
 7753018 7753019 CDR20291_1091 CDR20291_1092   ffh TRUE 0.947 -3.000 0.000 1.000   NA
 7753019 7753020 CDR20291_1092 CDR20291_1093 ffh rpsP TRUE 0.986 38.000 0.361 1.000 N NA
 7753020 7753021 CDR20291_1093 CDR20291_1094 rpsP   TRUE 0.975 65.000 0.385 1.000   NA
 7753021 7753022 CDR20291_1094 CDR20291_1095   rimM TRUE 0.933 108.000 0.324 1.000   NA
 7753022 7753023 CDR20291_1095 CDR20291_1096 rimM trmD TRUE 0.999 9.000 0.672 1.000 Y NA
 7753023 7753024 CDR20291_1096 CDR20291_1097 trmD rplS TRUE 0.941 185.000 0.567 1.000 Y NA
 7753024 7753025 CDR20291_1097 CDR20291_1098 rplS   FALSE 0.164 312.000 0.027 1.000   NA
 7753025 7753026 CDR20291_1098 CDR20291_1099     FALSE 0.032 389.000 0.000 0.056   NA
 7753026 7753027 CDR20291_1099 CDR20291_1100     FALSE 0.045 1118.000 0.000 0.001 Y NA
 7753027 7753028 CDR20291_1100 CDR20291_1101     FALSE 0.008 565.000 0.000 1.000 N NA
 7753028 7753029 CDR20291_1101 CDR20291_1102   rnhB TRUE 0.491 68.000 0.000 1.000 N NA
 7753029 7753030 CDR20291_1102 CDR20291_1103 rnhB   TRUE 0.846 58.000 0.003 1.000 N NA
 7753030 7753031 CDR20291_1103 CDR20291_1104     TRUE 0.496 66.000 0.000 NA   NA
 7753032 7753033 CDR20291_1105 CDR20291_1106     FALSE 0.049 241.000 0.000 NA   NA
 7753033 7753034 CDR20291_1106 CDR20291_1107     TRUE 0.998 3.000 0.400 NA   NA
 7753034 7753035 CDR20291_1107 CDR20291_1108     TRUE 0.999 14.000 1.000 NA   NA
 7753035 7753036 CDR20291_1108 CDR20291_1109     TRUE 0.862 188.000 0.600 1.000 N NA
 7753036 7753037 CDR20291_1109 CDR20291_1110     TRUE 1.000 -16.000 0.800 0.025 Y NA
 7753038 7753039 CDR20291_1111 CDR20291_1112     TRUE 0.976 31.000 0.050 0.060 N NA
 7753039 7753040 CDR20291_1112 CDR20291_1113     TRUE 0.983 19.000 0.053 1.000 N NA
 7753040 7753041 CDR20291_1113 CDR20291_1114   topA TRUE 0.994 33.000 0.238 1.000 Y NA
 7753041 7753042 CDR20291_1114 CDR20291_1115 topA codY TRUE 0.512 165.000 0.025 1.000 N NA
 7753042 7753043 CDR20291_1115 CDR20291_1116 codY   TRUE 0.882 77.000 0.021 0.060 N NA
 7753043 7753044 CDR20291_1116 CDR20291_1117     TRUE 0.984 31.000 0.154 1.000   NA
 7753044 7753045 CDR20291_1117 CDR20291_1118     TRUE 0.714 109.000 0.017 NA   NA
 7753045 7753046 CDR20291_1118 CDR20291_1119   iscS2 TRUE 0.992 9.000 0.125 NA N NA
 7753046 7753047 CDR20291_1119 CDR20291_1120 iscS2   TRUE 0.550 54.000 0.000 1.000 N NA
 7753047 7753048 CDR20291_1120 CDR20291_1121   trmU FALSE 0.031 289.000 0.000 1.000 N NA
 7753048 7753049 CDR20291_1121 CDR20291_1122 trmU alaS FALSE 0.082 449.000 0.000 0.038 Y NA
 7753049 7753050 CDR20291_1122 CDR20291_1123 alaS   TRUE 0.986 25.000 0.110 NA   NA
 7753050 7753051 CDR20291_1123 CDR20291_1124     TRUE 0.980 10.000 0.016 NA   NA
 7753051 7753052 CDR20291_1124 CDR20291_1125     TRUE 0.331 206.000 0.015 NA   NA
 7753052 7753053 CDR20291_1125 CDR20291_1126     TRUE 0.943 78.000 0.217 NA   NA
 7753053 7753054 CDR20291_1126 CDR20291_1127   fur FALSE 0.283 282.000 0.078 NA   NA
 7753056 7753057 CDR20291_1129 CDR20291_1130     FALSE 0.076 206.000 0.000 NA   NA
 7753057 7753058 CDR20291_1130 CDR20291_1131   dacF TRUE 0.546 54.000 0.000 NA   NA
 7753059 7753060 CDR20291_1132 CDR20291_1133     TRUE 0.985 21.000 0.070 NA   NA
 7753061 7753062 CDR20291_1134 CDR20291_1135   scpA TRUE 0.977 30.000 0.092 NA   NA
 7753062 7753063 CDR20291_1135 CDR20291_1136 scpA scpB TRUE 0.998 2.000 0.570 NA   NA
 7753063 7753064 CDR20291_1136 CDR20291_1137 scpB   FALSE 0.138 162.000 0.000 NA   NA
 7753064 7753065 CDR20291_1137 CDR20291_1138     TRUE 0.953 -16.000 0.000 NA   NA
 7753065 7753066 CDR20291_1138 CDR20291_1139     FALSE 0.047 248.000 0.000 NA   NA
 7753066 7753067 CDR20291_1139 CDR20291_1140   pepA TRUE 0.865 16.000 0.000 1.000 N NA
 7753070 7753071 CDR20291_1143 CDR20291_1144     FALSE 0.238 120.000 0.000 NA   NA
 7753072 7753073 CDR20291_1145 CDR20291_1146 acd dnaF FALSE 0.068 215.000 0.000 1.000 N NA
 7753073 7753074 CDR20291_1146 CDR20291_1147 dnaF   TRUE 0.452 204.000 0.059 NA   NA
 7753074 7753075 CDR20291_1147 CDR20291_1148   nusA TRUE 0.996 30.000 0.759 NA   NA
 7753075 7753076 CDR20291_1148 CDR20291_1149 nusA   TRUE 0.999 7.000 0.323 NA Y NA
 7753076 7753077 CDR20291_1149 CDR20291_1150     TRUE 0.999 -10.000 0.408 NA N NA
 7753077 7753078 CDR20291_1150 CDR20291_1151   infB TRUE 0.997 22.000 0.223 NA Y NA
 7753078 7753079 CDR20291_1151 CDR20291_1152 infB rbfA TRUE 0.996 43.000 0.530 1.000 Y NA
 7753079 7753080 CDR20291_1152 CDR20291_1153 rbfA   TRUE 0.998 -46.000 0.173 1.000   NA
 7753080 7753081 CDR20291_1153 CDR20291_1154   truB TRUE 0.994 13.000 0.221 1.000   NA
 7753081 7753082 CDR20291_1154 CDR20291_1155 truB ribC TRUE 0.888 131.000 0.308 1.000 N NA
 7753082 7753083 CDR20291_1155 CDR20291_1156 ribC   TRUE 0.932 0.000 0.000 NA   NA
 7753083 7753084 CDR20291_1156 CDR20291_1157   rpsO TRUE 0.904 6.000 0.000 NA   NA
 7753084 7753085 CDR20291_1157 CDR20291_1158 rpsO   FALSE 0.195 240.000 0.002 NA   NA
 7753085 7753086 CDR20291_1158 CDR20291_1159   comR TRUE 0.586 125.000 0.003 NA   NA
 7753086 7753087 CDR20291_1159 CDR20291_1160 comR   FALSE 0.255 266.000 0.048 1.000 N NA
 7753087 7753088 CDR20291_1160 CDR20291_1161     TRUE 0.738 158.000 0.127 1.000   NA
 7753088 7753089 CDR20291_1161 CDR20291_1162     TRUE 0.971 35.000 0.104 NA   NA
 7753089 7753090 CDR20291_1162 CDR20291_1163   dapG TRUE 0.993 10.000 0.148 NA   NA
 7753090 7753091 CDR20291_1163 CDR20291_1164 dapG tepA TRUE 0.813 113.000 0.080 1.000 N NA
 7753091 7753092 CDR20291_1164 CDR20291_1165 tepA ftsK TRUE 0.708 123.000 0.042 1.000 N NA
 7753092 7753093 CDR20291_1165 CDR20291_1166 ftsK   TRUE 0.987 3.000 0.028 NA   NA
 7753093 7753094 CDR20291_1166 CDR20291_1167     TRUE 0.941 -6.000 0.000 NA   NA
 7753094 7753095 CDR20291_1167 CDR20291_1168   pgsA TRUE 0.997 -22.000 0.132 1.000 N NA
 7753095 7753096 CDR20291_1168 CDR20291_1169 pgsA recA FALSE 0.172 288.000 0.022 1.000 N NA
 7753096 7753097 CDR20291_1169 CDR20291_1170 recA   TRUE 0.467 176.000 0.018 1.000   NA
 7753097 7753098 CDR20291_1170 CDR20291_1171     FALSE 0.008 635.000 0.000 1.000   NA
 7753099 7753100 CDR20291_1172 CDR20291_1173 sip3 bacA1 TRUE 0.919 22.000 0.000 0.086 N NA
 7753101 7753102 CDR20291_1174 CDR20291_1175 xerD2   TRUE 0.501 144.000 0.002 1.000 N NA
 7753102 7753103 CDR20291_1175 CDR20291_1176     FALSE 0.026 311.000 0.000 1.000 N NA
 7753103 7753104 CDR20291_1176 CDR20291_1177   malX FALSE 0.013 413.000 0.000 1.000 N NA
 7753104 7753105 CDR20291_1177 CDR20291_1178 malX   FALSE 0.144 159.000 0.000 1.000 N NA
 7753105 7753106 CDR20291_1178 CDR20291_1179   glvG TRUE 0.357 133.000 0.000 0.027 N NA
 7753108 7753109 CDR20291_1181 CDR20291_1182   exoA TRUE 0.504 146.000 0.003 1.000 N NA
 7753111 7753112 CDR20291_1184 CDR20291_1185   glnA FALSE 0.214 129.000 0.000 NA   NA
 7753114 7753115 CDR20291_1187 CDR20291_1188     TRUE 0.998 -13.000 0.333 NA   NA
 7753115 7753116 CDR20291_1188 CDR20291_1189     TRUE 0.944 -7.000 0.000 NA   NA
 7753116 7753117 CDR20291_1189 CDR20291_1190     FALSE 0.329 102.000 0.000 NA   NA
 7753117 7753118 CDR20291_1190 CDR20291_1191     FALSE 0.295 108.000 0.000 NA   NA
 7753118 7753119 CDR20291_1191 CDR20291_1192     TRUE 0.922 2.000 0.000 NA   NA
 7753119 7753120 CDR20291_1192 CDR20291_1193     TRUE 0.998 2.000 0.490 NA   NA
 7753120 7753121 CDR20291_1193 CDR20291_1194     TRUE 0.658 135.000 0.038 NA   NA
 7753123 7753124 CDR20291_1196 CDR20291_1197   cspB TRUE 0.628 183.000 0.118 NA   NA
 7753124 7753125 CDR20291_1197 CDR20291_1198 cspB   FALSE 0.015 421.000 0.000 1.000   NA
 7753126 7753127 CDR20291_1199 CDR20291_1200     TRUE 0.384 91.000 0.000 NA   NA
 7753127 7753128 CDR20291_1200 CDR20291_1201     FALSE 0.134 164.000 0.000 NA   NA
 7753128 7753129 CDR20291_1201 CDR20291_1202     TRUE 0.423 82.000 0.000 NA   NA
 7753130 7753131 CDR20291_1203 CDR20291_1204     FALSE 0.312 105.000 0.000 NA   NA
 7753131 7753132 CDR20291_1204 CDR20291_1205     FALSE 0.046 249.000 0.000 NA   NA
 7753132 7753133 CDR20291_1205 CDR20291_1206     TRUE 0.907 5.000 0.000 NA   NA
 7753133 7753134 CDR20291_1206 CDR20291_1207     TRUE 0.873 14.000 0.000 NA   NA
 7753134 7753135 CDR20291_1207 CDR20291_1208     TRUE 0.961 114.000 0.667 NA   NA
 7753135 7753136 CDR20291_1208 CDR20291_1209     TRUE 0.997 27.000 0.667 NA   NA
 7753136 7753137 CDR20291_1209 CDR20291_1210     TRUE 0.956 -27.000 0.000 NA   NA
 7753137 7753138 CDR20291_1210 CDR20291_1211     TRUE 0.932 0.000 0.000 NA   NA
 7753138 7753139 CDR20291_1211 CDR20291_1212     TRUE 0.399 282.000 0.182 NA   NA
 7753139 7753140 CDR20291_1212 CDR20291_1213     TRUE 0.992 16.000 0.182 NA   NA
 7753140 7753141 CDR20291_1213 CDR20291_1214     TRUE 0.999 0.000 1.000 NA   NA
 7753141 7753142 CDR20291_1214 CDR20291_1215     TRUE 1.000 -7.000 1.000 NA   NA
 7753142 7753143 CDR20291_1215 CDR20291_1216     TRUE 0.996 -3.000 0.167 NA   NA
 7753143 7753144 CDR20291_1216 CDR20291_1217     TRUE 0.926 1.000 0.000 NA   NA
 7753144 7753145 CDR20291_1217 CDR20291_1218     TRUE 0.856 22.000 0.000 NA   NA
 7753145 7753146 CDR20291_1218 CDR20291_1219     FALSE 0.045 251.000 0.000 NA   NA
 7753146 7753147 CDR20291_1219 CDR20291_1220     FALSE 0.039 263.000 0.000 NA   NA
 7753148 7753149 CDR20291_1221 CDR20291_1222     FALSE 0.056 228.000 0.000 NA   NA
 7753150 7753151 CDR20291_1223 CDR20291_1224     TRUE 0.862 20.000 0.000 NA   NA
 7753152 7753153 CDR20291_1225 CDR20291_1226     FALSE 0.015 412.000 0.000 1.000   NA
 7753153 7753154 CDR20291_1226 CDR20291_1227     TRUE 0.923 2.000 0.000 1.000 N NA
 7753157 7753158 CDR20291_1230 CDR20291_1231     TRUE 0.973 29.000 0.053 1.000   NA
 7753158 7753159 CDR20291_1231 CDR20291_1232     TRUE 0.997 -16.000 0.137 1.000 N NA
 7753159 7753160 CDR20291_1232 CDR20291_1233     TRUE 0.999 30.000 0.780 NA Y NA
 7753162 7753163 CDR20291_1235 CDR20291_1236     TRUE 0.978 19.000 0.028 NA   NA
 7753163 7753164 CDR20291_1236 CDR20291_1237     TRUE 0.994 13.000 0.250 NA   NA
 7753166 7753167 CDR20291_1239 CDR20291_1240     FALSE 0.076 218.000 0.000 1.000   NA
 7753168 7753169 CDR20291_1241 CDR20291_1242     TRUE 0.842 24.000 0.000 NA   NA
 7753169 7753170 CDR20291_1242 CDR20291_1243     FALSE 0.009 509.000 0.000 NA   NA
 7753170 7753171 CDR20291_1243 CDR20291_1244     TRUE 0.334 101.000 0.000 NA   NA
 7753172 7753173 CDR20291_1245 CDR20291_1246     TRUE 0.474 71.000 0.000 NA   NA
 7753174 7753175 CDR20291_1247 CDR20291_1248   glpQ TRUE 0.787 80.000 0.004 1.000 N NA
 7753176 7753177 CDR20291_1249 CDR20291_1250     FALSE 0.018 363.000 0.000 NA   NA
 7753177 7753178 CDR20291_1250 CDR20291_1251     TRUE 0.997 -13.000 0.141 NA   NA
 7753179 7753180 CDR20291_1252 CDR20291_1253     TRUE 0.819 26.000 0.000 NA   NA
 7753180 7753181 CDR20291_1253 CDR20291_1254     TRUE 0.525 59.000 0.000 NA   NA
 7753181 7753182 CDR20291_1254 CDR20291_1255   ddl TRUE 0.844 24.000 0.000 1.000 N NA
 7753183 7753184 CDR20291_1256 CDR20291_1257     TRUE 0.831 70.000 0.004 1.000   NA
 7753185 7753186 CDR20291_1258 CDR20291_1259     TRUE 0.661 200.000 0.222 NA   NA
 7753188 7753189 CDR20291_1261 CDR20291_1262     FALSE 0.280 111.000 0.000 NA   NA
 7753190 7753191 CDR20291_1263 CDR20291_1264     TRUE 0.492 67.000 0.000 NA   NA
 7753192 7753193 CDR20291_1265 CDR20291_1266     FALSE 0.004 3096.000 0.000 1.000 N NA
 7753193 7753194 CDR20291_1266 CDR20291_1267     FALSE 0.320 240.000 0.000 0.010 Y NA
 7753194 7753195 CDR20291_1267 CDR20291_1268     TRUE 0.966 31.000 0.000 0.010 Y NA
 7753196 7753197 CDR20291_1269 CDR20291_1270     FALSE 0.176 145.000 0.000 NA   NA
 7753198 7753199 CDR20291_1271 CDR20291_1272     FALSE 0.009 505.000 0.000 NA   NA
 7753199 7753200 CDR20291_1272 CDR20291_1273     FALSE 0.074 220.000 0.000 1.000   NA
 7753200 7753201 CDR20291_1273 CDR20291_1274     TRUE 0.870 78.000 0.054 NA N NA
 7753202 7753203 CDR20291_1275 CDR20291_1276     TRUE 0.337 100.000 0.000 NA   NA
 7753204 7753205 CDR20291_1277 CDR20291_1278     TRUE 0.623 43.000 0.000 NA   NA
 7753205 7753206 CDR20291_1278 CDR20291_1279     FALSE 0.130 168.000 0.000 1.000 N NA
 7753207 7753208 CDR20291_1280 CDR20291_1281     TRUE 0.968 3.000 0.000 0.009   NA
 7753210 7753211 CDR20291_1283 CDR20291_1284     TRUE 0.912 166.000 0.667 NA   NA
 7753211 7753212 CDR20291_1284 CDR20291_1285     TRUE 0.968 115.000 0.750 1.000   NA
 7753212 7753213 CDR20291_1285 CDR20291_1286     TRUE 0.981 65.000 0.500 1.000   NA
 7753213 7753214 CDR20291_1286 CDR20291_1287     FALSE 0.239 131.000 0.000 1.000   NA
 7753214 7753215 CDR20291_1287 CDR20291_1288     FALSE 0.124 182.000 0.000 1.000   NA
 7753215 7753216 CDR20291_1288 CDR20291_1289     TRUE 0.999 -7.000 0.869 1.000   NA
 7753216 7753217 CDR20291_1289 CDR20291_1290     FALSE 0.009 520.000 0.000 NA   NA
 7753217 7753218 CDR20291_1290 CDR20291_1291     FALSE 0.049 242.000 0.000 NA   NA
 7753218 7753219 CDR20291_1291 CDR20291_1292     FALSE 0.241 119.000 0.000 NA   NA
 7753219 7753220 CDR20291_1292 CDR20291_1293     TRUE 0.796 28.000 0.000 NA   NA
 7753220 7753221 CDR20291_1293 CDR20291_1294   pabA TRUE 0.844 24.000 0.000 1.000 N NA
 7753221 7753222 CDR20291_1294 CDR20291_1295 pabA pabB TRUE 0.996 2.000 0.032 1.000 Y NA
 7753222 7753223 CDR20291_1295 CDR20291_1296 pabB pabC TRUE 0.997 -10.000 0.008 1.000 Y NA
 7753223 7753224 CDR20291_1296 CDR20291_1297 pabC   TRUE 0.934 34.000 0.008 NA   NA
 7753224 7753225 CDR20291_1297 CDR20291_1298   folE TRUE 0.968 26.000 0.024 NA   NA
 7753225 7753226 CDR20291_1298 CDR20291_1299 folE folP TRUE 0.953 54.000 0.009 1.000 Y NA
 7753226 7753227 CDR20291_1299 CDR20291_1300 folP folB TRUE 0.994 11.000 0.024 1.000 Y NA
 7753227 7753228 CDR20291_1300 CDR20291_1301 folB folK TRUE 0.999 -7.000 0.142 1.000 Y NA
 7753228 7753229 CDR20291_1301 CDR20291_1302 folK   TRUE 0.990 -19.000 0.003 1.000 N NA
 7753229 7753230 CDR20291_1302 CDR20291_1303   dnaG FALSE 0.065 219.000 0.000 1.000 N NA
 7753230 7753231 CDR20291_1303 CDR20291_1304 dnaG rpoD1 TRUE 0.993 18.000 0.209 1.000 N NA
 7753231 7753232 CDR20291_1304 CDR20291_1305 rpoD1   TRUE 0.832 147.000 0.239 NA   NA
 7753232 7753233 CDR20291_1305 CDR20291_1306     TRUE 0.995 14.000 0.283 NA   NA
 7753233 7753234 CDR20291_1306 CDR20291_1307   wrbA TRUE 0.525 59.000 0.000 NA   NA
 7753235 7753236 CDR20291_1308 CDR20291_1309     FALSE 0.018 386.000 0.000 1.000   NA
 7753236 7753237 CDR20291_1309 CDR20291_1310     FALSE 0.312 105.000 0.000 NA   NA
 7753237 7753238 CDR20291_1310 CDR20291_1311     TRUE 0.996 -7.000 0.105 NA   NA
 7753239 7753240 CDR20291_1312 CDR20291_1313     FALSE 0.039 264.000 0.000 NA   NA
 7753240 7753241 CDR20291_1313 CDR20291_1314     TRUE 0.999 -22.000 0.182 1.000 Y NA
 7753241 7753242 CDR20291_1314 CDR20291_1315     TRUE 0.431 80.000 0.000 1.000 N NA
 7753242 7753243 CDR20291_1315 CDR20291_1316     TRUE 1.000 1.000 0.750 1.000 Y NA
 7753243 7753244 CDR20291_1316 CDR20291_1317     FALSE 0.063 221.000 0.000 1.000 N NA
 7753248 7753249 CDR20291_1321 CDR20291_1322     TRUE 0.999 13.000 0.600 0.004 Y NA
 7753249 7753250 CDR20291_1322 CDR20291_1323     FALSE 0.249 118.000 0.000 1.000 N NA
 7753250 7753251 CDR20291_1323 CDR20291_1324     FALSE 0.008 553.000 0.000 NA   NA
 7753251 7753252 CDR20291_1324 CDR20291_1325     FALSE 0.238 120.000 0.000 NA   NA
 7753252 7753253 CDR20291_1325 CDR20291_1326     FALSE 0.010 524.000 0.000 1.000   NA
 7753253 7753254 CDR20291_1326 CDR20291_1327   feoA1 TRUE 0.999 13.000 0.791 0.006   NA
 7753254 7753255 CDR20291_1327 CDR20291_1328 feoA1 feoB1 TRUE 0.995 85.000 0.871 1.000 Y NA
 7753255 7753256 CDR20291_1328 CDR20291_1329 feoB1   TRUE 0.862 20.000 0.000 NA   NA
 7753256 7753257 CDR20291_1329 CDR20291_1330     FALSE 0.109 180.000 0.000 NA   NA
 7753257 7753258 CDR20291_1330 CDR20291_1331   ssuC TRUE 0.411 85.000 0.000 NA   NA
 7753258 7753259 CDR20291_1331 CDR20291_1332 ssuC ssuB TRUE 0.998 -7.000 0.111 1.000 Y NA
 7753259 7753260 CDR20291_1332 CDR20291_1333 ssuB ssuA TRUE 0.990 34.000 0.100 1.000 Y NA
 7753264 7753265 CDR20291_1337 CDR20291_1338     FALSE 0.007 639.000 0.000 NA   NA
 7753265 7753266 CDR20291_1338 CDR20291_1339   metN FALSE 0.007 647.000 0.000 NA   NA
 7753266 7753267 CDR20291_1339 CDR20291_1340 metN metI TRUE 0.999 -7.000 0.178 1.000 Y NA
 7753267 7753268 CDR20291_1340 CDR20291_1341 metI metQ TRUE 0.916 36.000 0.000 NA Y NA
 7753268 7753269 CDR20291_1341 CDR20291_1342 metQ   FALSE 0.144 148.000 0.000 NA N NA
 7753269 7753270 CDR20291_1342 CDR20291_1343     FALSE 0.293 109.000 0.000 1.000 N NA
 7753270 7753271 CDR20291_1343 CDR20291_1344     FALSE 0.005 880.000 0.000 1.000 N NA
 7753271 7753272 CDR20291_1344 CDR20291_1345   proC1 TRUE 0.653 40.000 0.000 1.000 N NA
 7753274 7753275 CDR20291_1347 CDR20291_1348   rpoD2 FALSE 0.037 270.000 0.000 NA   NA
 7753275 7753276 CDR20291_1348 CDR20291_1349 rpoD2   FALSE 0.012 474.000 0.000 1.000   NA
 7753276 7753277 CDR20291_1349 CDR20291_1350   deoC TRUE 0.735 36.000 0.000 1.000   NA
 7753277 7753278 CDR20291_1350 CDR20291_1351 deoC   FALSE 0.105 183.000 0.000 1.000 N NA
 7753278 7753279 CDR20291_1351 CDR20291_1352     TRUE 0.996 4.000 0.273 1.000 N NA
 7753279 7753280 CDR20291_1352 CDR20291_1353     TRUE 0.996 1.000 0.182 NA   NA
 7753282 7753283 CDR20291_1355 CDR20291_1356     TRUE 0.998 -7.000 0.250 NA   NA
 7753283 7753284 CDR20291_1356 CDR20291_1357     TRUE 0.888 11.000 0.000 NA   NA
 7753284 7753285 CDR20291_1357 CDR20291_1358     TRUE 0.907 5.000 0.000 NA   NA
 7753286 7753287 CDR20291_1359 CDR20291_1360     FALSE 0.014 390.000 0.000 NA   NA
 7753287 7753288 CDR20291_1360 CDR20291_1361   panC FALSE 0.004 1425.000 0.000 NA   NA
 7753288 7753289 CDR20291_1361 CDR20291_1362 panC panB TRUE 0.999 19.000 0.395 0.001 Y NA
 7753289 7753290 CDR20291_1362 CDR20291_1363 panB   TRUE 0.995 -25.000 0.055 1.000   NA
 7753291 7753292 CDR20291_1364 CDR20291_1365     FALSE 0.031 1613.000 0.000 0.091 Y NA
 11405381 7753292   CDR20291_1365     FALSE NA 924.000 0.000 NA   NA
 11547744 7753292   CDR20291_1365     FALSE NA 924.000 0.000 NA   NA
 11690136 7753292   CDR20291_1365     FALSE NA 924.000 0.000 NA   NA
 11405382 7753292   CDR20291_1365     FALSE NA 888.000 0.000 NA   NA
 11547745 7753292   CDR20291_1365     FALSE NA 888.000 0.000 NA   NA
 11690137 7753292   CDR20291_1365     FALSE NA 888.000 0.000 NA   NA
 11405383 7753292   CDR20291_1365     FALSE NA 859.000 0.000 NA   NA
 11547746 7753292   CDR20291_1365     FALSE NA 859.000 0.000 NA   NA
 11690138 7753292   CDR20291_1365     FALSE NA 859.000 0.000 NA   NA
 11405384 7753292   CDR20291_1365     FALSE NA 822.000 0.000 NA   NA
 11547747 7753292   CDR20291_1365     FALSE NA 822.000 0.000 NA   NA
 11690139 7753292   CDR20291_1365     FALSE NA 822.000 0.000 NA   NA
 11405385 7753292   CDR20291_1365     FALSE NA 793.000 0.000 NA   NA
 11547748 7753292   CDR20291_1365     FALSE NA 793.000 0.000 NA   NA
 11690140 7753292   CDR20291_1365     FALSE NA 793.000 0.000 NA   NA
 11405386 7753292   CDR20291_1365     FALSE NA 755.000 0.000 NA   NA
 11547749 7753292   CDR20291_1365     FALSE NA 755.000 0.000 NA   NA
 11690141 7753292   CDR20291_1365     FALSE NA 755.000 0.000 NA   NA
 11405387 7753292   CDR20291_1365     FALSE NA 726.000 0.000 NA   NA
 11547750 7753292   CDR20291_1365     FALSE NA 726.000 0.000 NA   NA
 11690142 7753292   CDR20291_1365     FALSE NA 726.000 0.000 NA   NA
 11405388 7753292   CDR20291_1365     FALSE NA 688.000 0.000 NA   NA
 11547751 7753292   CDR20291_1365     FALSE NA 688.000 0.000 NA   NA
 11690143 7753292   CDR20291_1365     FALSE NA 688.000 0.000 NA   NA
 11405389 7753292   CDR20291_1365     FALSE NA 659.000 0.000 NA   NA
 11547752 7753292   CDR20291_1365     FALSE NA 659.000 0.000 NA   NA
 11690144 7753292   CDR20291_1365     FALSE NA 659.000 0.000 NA   NA
 7753293 7753294 CDR20291_1366 CDR20291_1367 feoB2 feoA2 TRUE 0.997 26.000 0.267 1.000 Y NA
 7753294 7753295 CDR20291_1367 CDR20291_1368 feoA2   FALSE 0.026 327.000 0.000 1.000   NA
 7753296 7753297 CDR20291_1369 CDR20291_1370   tyrR FALSE 0.010 476.000 0.000 NA   NA
 7753299 7753300 CDR20291_1372 CDR20291_1373     FALSE 0.072 223.000 0.000 1.000   NA
 7753300 7753301 CDR20291_1373 CDR20291_1374     TRUE 0.384 91.000 0.000 NA   NA
 7753301 7753302 CDR20291_1374 CDR20291_1375   pyrC TRUE 0.553 53.000 0.000 NA   NA
 7753303 7753304 CDR20291_1376 CDR20291_1377     TRUE 0.996 3.000 0.044 1.000 Y NA
 7753304 7753305 CDR20291_1377 CDR20291_1378     TRUE 0.986 8.000 0.044 NA N NA
 7753305 7753306 CDR20291_1378 CDR20291_1379     FALSE 0.241 112.000 0.000 NA N NA
 7753306 7753307 CDR20291_1379 CDR20291_1380     TRUE 0.965 24.000 0.000 1.000 Y NA
 7753308 7753309 CDR20291_1381 CDR20291_1382     TRUE 0.959 -13.000 0.000 1.000   NA
 7753309 7753310 CDR20291_1382 CDR20291_1383     FALSE 0.070 225.000 0.000 1.000   NA
 7753312 7753313 CDR20291_1385 CDR20291_1386   aspB TRUE 0.965 0.000 0.000 0.040 N NA
 7753313 7753314 CDR20291_1386 CDR20291_1387 aspB   FALSE 0.018 366.000 0.000 1.000 N NA
 7753314 7753315 CDR20291_1387 CDR20291_1388     TRUE 0.442 78.000 0.000 1.000 N NA
 7753315 7753316 CDR20291_1388 CDR20291_1389     TRUE 0.942 0.000 0.000 1.000   NA
 7753316 7753317 CDR20291_1389 CDR20291_1390     TRUE 0.409 119.000 0.000 0.081   NA
 7753317 7753318 CDR20291_1390 CDR20291_1391     TRUE 0.339 107.000 0.000 1.000   NA
 7753318 7753319 CDR20291_1391 CDR20291_1392     FALSE 0.011 489.000 0.000 1.000   NA
 7753319 7753320 CDR20291_1392 CDR20291_1393     TRUE 0.449 76.000 0.000 NA   NA
 7753322 7753323 CDR20291_1395 CDR20291_1396   hisZ FALSE 0.006 862.000 0.000 1.000   NA
 7753323 7753324 CDR20291_1396 CDR20291_1397 hisZ hisG TRUE 0.997 22.000 0.239 1.000 Y NA
 7753324 7753325 CDR20291_1397 CDR20291_1398 hisG hisC TRUE 0.986 34.000 0.007 0.004 Y NA
 7753325 7753326 CDR20291_1398 CDR20291_1399 hisC hisB TRUE 0.999 3.000 0.341 0.004 Y NA
 7753326 7753327 CDR20291_1399 CDR20291_1400 hisB hisH TRUE 0.999 2.000 0.125 0.004 Y NA
 7753327 7753328 CDR20291_1400 CDR20291_1401 hisH hisA TRUE 0.999 -3.000 0.124 0.004 Y NA
 7753328 7753329 CDR20291_1401 CDR20291_1402 hisA hisF TRUE 1.000 -18.000 0.433 0.004 Y NA
 7753329 7753330 CDR20291_1402 CDR20291_1403 hisF hisI TRUE 0.999 28.000 0.430 0.004 Y NA
 7753330 7753331 CDR20291_1403 CDR20291_1404 hisI   FALSE 0.029 786.000 0.000 1.000 Y NA
 7753331 7753332 CDR20291_1404 CDR20291_1405     FALSE 0.006 755.000 0.000 1.000 N NA
 7753332 7753333 CDR20291_1405 CDR20291_1406     TRUE 0.946 93.000 0.300 1.000 N NA
 7753333 7753334 CDR20291_1406 CDR20291_1407   sigV TRUE 0.562 52.000 0.000 1.000 N NA
 7753334 7753335 CDR20291_1407 CDR20291_1408 sigV   TRUE 0.884 12.000 0.000 NA   NA
 7753335 7753336 CDR20291_1408 CDR20291_1409     TRUE 0.623 43.000 0.000 NA   NA
 7753336 7753337 CDR20291_1409 CDR20291_1410     TRUE 0.634 42.000 0.000 NA   NA
 7753337 7753338 CDR20291_1410 CDR20291_1411     TRUE 0.907 5.000 0.000 NA   NA
 7753338 7753339 CDR20291_1411 CDR20291_1412     FALSE 0.008 531.000 0.000 NA   NA
 7753339 7753340 CDR20291_1412 CDR20291_1413   ilvC FALSE 0.037 270.000 0.000 NA   NA
 7753340 7753341 CDR20291_1413 CDR20291_1414 ilvC ilvB TRUE 0.973 53.000 0.006 0.001 Y NA
 7753342 7753343 CDR20291_1415 CDR20291_1416     TRUE 0.432 79.000 0.000 NA   NA
 7753343 7753344 CDR20291_1416 CDR20291_1417     TRUE 0.996 13.000 0.357 NA   NA
 7753344 7753345 CDR20291_1417 CDR20291_1418     FALSE 0.007 620.000 0.000 NA   NA
 7753346 7753347 CDR20291_1419 CDR20291_1420     FALSE 0.004 1537.000 0.000 NA   NA
 7753347 7753348 CDR20291_1420 CDR20291_1421     TRUE 0.992 12.000 0.143 NA   NA
 7753348 7753349 CDR20291_1421 CDR20291_1422     FALSE 0.013 403.000 0.000 NA   NA
 7753349 7753350 CDR20291_1422 CDR20291_1423     TRUE 0.850 23.000 0.000 NA   NA
 7753350 7753351 CDR20291_1423 CDR20291_1424     TRUE 0.997 0.000 0.250 NA   NA
 7753351 7753352 CDR20291_1424 CDR20291_1425     TRUE 0.884 12.000 0.000 NA   NA
 7753352 7753353 CDR20291_1425 CDR20291_1426     FALSE 0.008 557.000 0.000 NA   NA
 7753353 7753354 CDR20291_1426 CDR20291_1427     FALSE 0.177 154.000 0.000 1.000   NA
 7753354 7753355 CDR20291_1427 CDR20291_1428     FALSE 0.032 283.000 0.000 NA   NA
 7753355 7753356 CDR20291_1428 CDR20291_1429     FALSE 0.030 292.000 0.000 NA   NA
 7753356 7753357 CDR20291_1429 CDR20291_1430     TRUE 0.999 21.000 1.000 NA   NA
 7753357 7753358 CDR20291_1430 CDR20291_1431     TRUE 0.478 70.000 0.000 NA   NA
 7753358 7753359 CDR20291_1431 CDR20291_1432     TRUE 0.962 -22.000 0.000 1.000   NA
 7753359 7753360 CDR20291_1432 CDR20291_1433     TRUE 0.904 6.000 0.000 NA   NA
 7753360 7753361 CDR20291_1433 CDR20291_1434     TRUE 0.949 -10.000 0.000 NA   NA
 7753361 7753362 CDR20291_1434 CDR20291_1435     FALSE 0.024 318.000 0.000 NA   NA
 7753362 7753363 CDR20291_1435 CDR20291_1436     TRUE 0.884 12.000 0.000 NA   NA
 7753363 7753364 CDR20291_1436 CDR20291_1437     FALSE 0.044 253.000 0.000 NA   NA
 7753364 7753365 CDR20291_1437 CDR20291_1438     TRUE 0.997 -6.000 0.250 NA   NA
 7753365 7753366 CDR20291_1438 CDR20291_1439     FALSE 0.016 379.000 0.000 NA   NA
 7753366 7753367 CDR20291_1439 CDR20291_1440     FALSE 0.019 349.000 0.000 NA   NA
 7753367 7753368 CDR20291_1440 CDR20291_1441     FALSE 0.126 170.000 0.000 NA   NA
 7753368 7753369 CDR20291_1441 CDR20291_1442     TRUE 0.863 17.000 0.000 NA   NA
 7753369 7753370 CDR20291_1442 CDR20291_1443     TRUE 0.525 59.000 0.000 NA   NA
 7753370 7753371 CDR20291_1443 CDR20291_1444     TRUE 0.470 72.000 0.000 NA   NA
 7753371 7753372 CDR20291_1444 CDR20291_1445     FALSE 0.020 341.000 0.000 NA   NA
 7753372 7753373 CDR20291_1445 CDR20291_1446     FALSE 0.004 1644.000 0.000 NA   NA
 11405390 7753367   CDR20291_1440     FALSE NA 4609.000 0.000 NA   NA
 11547753 7753367   CDR20291_1440     FALSE NA 4609.000 0.000 NA   NA
 11690145 7753367   CDR20291_1440     FALSE NA 4609.000 0.000 NA   NA
 11405391 7753367   CDR20291_1440     FALSE NA 4638.000 0.000 NA   NA
 11547754 7753367   CDR20291_1440     FALSE NA 4638.000 0.000 NA   NA
 11690146 7753367   CDR20291_1440     FALSE NA 4638.000 0.000 NA   NA
 11405392 7753367   CDR20291_1440     FALSE NA 4674.000 0.000 NA   NA
 11547755 7753367   CDR20291_1440     FALSE NA 4674.000 0.000 NA   NA
 11690147 7753367   CDR20291_1440     FALSE NA 4674.000 0.000 NA   NA
 11405393 7753367   CDR20291_1440     FALSE NA 4703.000 0.000 NA   NA
 11547756 7753367   CDR20291_1440     FALSE NA 4703.000 0.000 NA   NA
 11690148 7753367   CDR20291_1440     FALSE NA 4703.000 0.000 NA   NA
 11405394 7753367   CDR20291_1440     FALSE NA 4740.000 0.000 NA   NA
 11547757 7753367   CDR20291_1440     FALSE NA 4740.000 0.000 NA   NA
 11690149 7753367   CDR20291_1440     FALSE NA 4740.000 0.000 NA   NA
 11405395 7753367   CDR20291_1440     FALSE NA 4769.000 0.000 NA   NA
 11547758 7753367   CDR20291_1440     FALSE NA 4769.000 0.000 NA   NA
 11690150 7753367   CDR20291_1440     FALSE NA 4769.000 0.000 NA   NA
 11405396 7753367   CDR20291_1440     FALSE NA 4806.000 0.000 NA   NA
 11547759 7753367   CDR20291_1440     FALSE NA 4806.000 0.000 NA   NA
 11690151 7753367   CDR20291_1440     FALSE NA 4806.000 0.000 NA   NA
 11405397 7753367   CDR20291_1440     FALSE NA 4835.000 0.000 NA   NA
 11547760 7753367   CDR20291_1440     FALSE NA 4835.000 0.000 NA   NA
 11690152 7753367   CDR20291_1440     FALSE NA 4835.000 0.000 NA   NA
 11405398 7753367   CDR20291_1440     FALSE NA 4871.000 0.000 NA   NA
 11547761 7753367   CDR20291_1440     FALSE NA 4871.000 0.000 NA   NA
 11690153 7753367   CDR20291_1440     FALSE NA 4871.000 0.000 NA   NA
 11405399 7753367   CDR20291_1440     FALSE NA 4900.000 0.000 NA   NA
 11547762 7753367   CDR20291_1440     FALSE NA 4900.000 0.000 NA   NA
 11690154 7753367   CDR20291_1440     FALSE NA 4900.000 0.000 NA   NA
 11405400 7753367   CDR20291_1440     FALSE NA 4937.000 0.000 NA   NA
 11547763 7753367   CDR20291_1440     FALSE NA 4937.000 0.000 NA   NA
 11690155 7753367   CDR20291_1440     FALSE NA 4937.000 0.000 NA   NA
 7753373 7753374 CDR20291_1446 CDR20291_1447     FALSE 0.005 865.000 0.000 NA   NA
 11405401 7753367   CDR20291_1440     FALSE NA 6830.000 0.000 NA   NA
 11547764 7753367   CDR20291_1440     FALSE NA 6830.000 0.000 NA   NA
 11690156 7753367   CDR20291_1440     FALSE NA 6830.000 0.000 NA   NA
 11405402 7753367   CDR20291_1440     FALSE NA 6858.000 0.000 NA   NA
 11547765 7753367   CDR20291_1440     FALSE NA 6858.000 0.000 NA   NA
 11690157 7753367   CDR20291_1440     FALSE NA 6858.000 0.000 NA   NA
 11405403 7753367   CDR20291_1440     FALSE NA 6896.000 0.000 NA   NA
 11547766 7753367   CDR20291_1440     FALSE NA 6896.000 0.000 NA   NA
 11690158 7753367   CDR20291_1440     FALSE NA 6896.000 0.000 NA   NA
 11405404 7753367   CDR20291_1440     FALSE NA 6924.000 0.000 NA   NA
 11547767 7753367   CDR20291_1440     FALSE NA 6924.000 0.000 NA   NA
 11690159 7753367   CDR20291_1440     FALSE NA 6924.000 0.000 NA   NA
 11405405 7753367   CDR20291_1440     FALSE NA 6961.000 0.000 NA   NA
 11547768 7753367   CDR20291_1440     FALSE NA 6961.000 0.000 NA   NA
 11690160 7753367   CDR20291_1440     FALSE NA 6961.000 0.000 NA   NA
 11405406 7753367   CDR20291_1440     FALSE NA 6989.000 0.000 NA   NA
 11547769 7753367   CDR20291_1440     FALSE NA 6989.000 0.000 NA   NA
 11690161 7753367   CDR20291_1440     FALSE NA 6989.000 0.000 NA   NA
 11405407 7753367   CDR20291_1440     FALSE NA 7028.000 0.000 NA   NA
 11547770 7753367   CDR20291_1440     FALSE NA 7028.000 0.000 NA   NA
 11690162 7753367   CDR20291_1440     FALSE NA 7028.000 0.000 NA   NA
 11405408 7753367   CDR20291_1440     FALSE NA 7056.000 0.000 NA   NA
 11547771 7753367   CDR20291_1440     FALSE NA 7056.000 0.000 NA   NA
 11690163 7753367   CDR20291_1440     FALSE NA 7056.000 0.000 NA   NA
 11405409 7753367   CDR20291_1440     FALSE NA 7091.000 0.000 NA   NA
 11547772 7753367   CDR20291_1440     FALSE NA 7091.000 0.000 NA   NA
 11690164 7753367   CDR20291_1440     FALSE NA 7091.000 0.000 NA   NA
 7753374 7753375 CDR20291_1447 CDR20291_1448     FALSE 0.193 138.000 0.000 NA   NA
 7753375 7753376 CDR20291_1448 CDR20291_1449     TRUE 0.496 66.000 0.000 NA   NA
 7753376 7753377 CDR20291_1449 CDR20291_1450     TRUE 0.991 17.000 0.154 NA   NA
 7753377 7753378 CDR20291_1450 CDR20291_1451     TRUE 0.899 8.000 0.000 NA   NA
 7753378 7753379 CDR20291_1451 CDR20291_1452     TRUE 0.873 14.000 0.000 NA   NA
 7753379 7753380 CDR20291_1452 CDR20291_1453     TRUE 0.997 5.000 0.320 NA   NA
 7753380 7753381 CDR20291_1453 CDR20291_1454     TRUE 0.998 13.000 0.720 NA   NA
 7753381 7753382 CDR20291_1454 CDR20291_1455     TRUE 0.999 -7.000 0.708 NA   NA
 7753382 7753383 CDR20291_1455 CDR20291_1456     TRUE 0.884 12.000 0.000 NA   NA
 7753383 7753384 CDR20291_1456 CDR20291_1457     TRUE 0.863 17.000 0.000 NA   NA
 7753384 7753385 CDR20291_1457 CDR20291_1458     TRUE 0.867 15.000 0.000 NA   NA
 7753385 7753386 CDR20291_1458 CDR20291_1459     TRUE 0.932 0.000 0.000 NA   NA
 7753386 7753387 CDR20291_1459 CDR20291_1460     TRUE 0.725 34.000 0.000 NA   NA
 7753387 7753388 CDR20291_1460 CDR20291_1461     FALSE 0.023 325.000 0.000 NA   NA
 7753388 7753389 CDR20291_1461 CDR20291_1462     FALSE 0.040 261.000 0.000 NA   NA
 7753389 7753390 CDR20291_1462 CDR20291_1463     TRUE 0.388 79.000 0.000 NA N NA
 7753390 7753391 CDR20291_1463 CDR20291_1464     TRUE 0.414 94.000 0.000 1.000   NA
 7753391 7753392 CDR20291_1464 CDR20291_1465     FALSE 0.006 921.000 0.000 1.000   NA
 7753392 7753393 CDR20291_1465 CDR20291_1466     FALSE 0.120 174.000 0.000 1.000 N NA
 7753395 7753396 CDR20291_1468 CDR20291_1469     TRUE 0.958 -1281.000 0.000 NA   NA
 7753396 7753397 CDR20291_1469 CDR20291_1470     FALSE 0.004 991.000 0.000 NA N NA
 7753399 7753400 CDR20291_1472 CDR20291_1473     FALSE 0.322 110.000 0.000 1.000   NA
 7753400 7753401 CDR20291_1473 CDR20291_1474   pgm1 TRUE 0.885 12.000 0.000 1.000 N NA
 7753401 7753402 CDR20291_1474 CDR20291_1475 pgm1   FALSE 0.080 214.000 0.000 1.000   NA
 7753402 7753403 CDR20291_1475 CDR20291_1476     FALSE 0.010 517.000 0.000 1.000   NA
 7753403 7753404 CDR20291_1476 CDR20291_1477   hom2 FALSE 0.006 709.000 0.000 1.000 N NA
 7753404 7753405 CDR20291_1477 CDR20291_1478 hom2   FALSE 0.267 114.000 0.000 NA   NA
 7753405 7753406 CDR20291_1478 CDR20291_1479   hisD FALSE 0.038 265.000 0.000 NA   NA
 7753407 7753408 CDR20291_1480 CDR20291_1481     FALSE 0.246 118.000 0.000 NA   NA
 7753409 7753410 CDR20291_1482 CDR20291_1483     TRUE 0.999 2.000 0.333 NA Y NA
 7753410 7753411 CDR20291_1483 CDR20291_1484     TRUE 0.998 -7.000 0.333 NA   NA
 7753411 7753412 CDR20291_1484 CDR20291_1485     TRUE 0.996 31.000 0.750 NA   NA
 7753412 7753413 CDR20291_1485 CDR20291_1486     TRUE 0.999 23.000 0.750 1.000 Y NA
 7753413 7753414 CDR20291_1486 CDR20291_1487     TRUE 0.999 21.000 0.750 NA Y NA
 7753414 7753415 CDR20291_1487 CDR20291_1488     FALSE 0.017 372.000 0.000 NA   NA
 7753415 7753416 CDR20291_1488 CDR20291_1489   kdpA FALSE 0.008 550.000 0.000 NA   NA
 7753416 7753417 CDR20291_1489 CDR20291_1490 kdpA kdpB TRUE 0.998 25.000 0.201 0.001 Y NA
 7753417 7753418 CDR20291_1490 CDR20291_1491 kdpB kdpC TRUE 1.000 4.000 0.877 0.001 Y NA
 7753418 7753419 CDR20291_1491 CDR20291_1492 kdpC cysM FALSE 0.052 237.000 0.000 1.000 N NA
 7753419 7753420 CDR20291_1492 CDR20291_1493 cysM cysA TRUE 0.997 18.000 0.065 0.001 Y NA
 7753421 7753422 CDR20291_1494 CDR20291_1495 map2   FALSE 0.083 197.000 0.000 NA   NA
 7753423 7753424 CDR20291_1496 CDR20291_1497   thiD FALSE 0.032 285.000 0.000 1.000 N NA
 7753424 7753425 CDR20291_1497 CDR20291_1498 thiD thiK TRUE 0.995 24.000 0.039 0.005 Y NA
 7753425 7753426 CDR20291_1498 CDR20291_1499 thiK thiE1 TRUE 0.998 23.000 0.190 0.005 Y NA
 7753426 7753427 CDR20291_1499 CDR20291_1500 thiE1   FALSE 0.193 139.000 0.000 1.000 N NA
 7753428 7753429 CDR20291_1501 CDR20291_1502     TRUE 0.998 -12.000 0.321 1.000 N NA
 7753429 7753430 CDR20291_1502 CDR20291_1503     TRUE 0.993 4.000 0.107 NA   NA
 7753431 7753432 CDR20291_1504 CDR20291_1505     TRUE 0.976 54.000 0.348 1.000 N NA
 7753432 7753433 CDR20291_1505 CDR20291_1506     TRUE 0.944 -7.000 0.000 NA   NA
 7753433 7753434 CDR20291_1506 CDR20291_1507     TRUE 0.884 12.000 0.000 NA   NA
 7753434 7753435 CDR20291_1507 CDR20291_1508     TRUE 0.896 9.000 0.000 NA   NA
 7753435 7753436 CDR20291_1508 CDR20291_1509     TRUE 0.888 11.000 0.000 NA   NA
 7753436 7753437 CDR20291_1509 CDR20291_1510     FALSE 0.017 366.000 0.000 NA   NA
 7753439 7753440 CDR20291_1512 CDR20291_1513     TRUE 0.999 1.000 0.448 NA Y NA
 7753440 7753441 CDR20291_1513 CDR20291_1514     FALSE 0.005 682.000 0.000 NA N NA
 7753441 7753442 CDR20291_1514 CDR20291_1515     FALSE 0.116 176.000 0.000 1.000 N NA
 7753442 7753443 CDR20291_1515 CDR20291_1516     TRUE 0.998 2.000 0.412 1.000 N NA
 7753443 7753444 CDR20291_1516 CDR20291_1517     TRUE 0.999 -6.000 0.471 NA   NA
 7753444 7753445 CDR20291_1517 CDR20291_1518     FALSE 0.062 222.000 0.000 NA   NA
 7753445 7753446 CDR20291_1518 CDR20291_1519     FALSE 0.077 191.000 0.000 NA N NA
 7753446 7753447 CDR20291_1519 CDR20291_1520     FALSE 0.021 362.000 0.000 1.000   NA
 7753447 7753448 CDR20291_1520 CDR20291_1521     TRUE 0.333 108.000 0.000 1.000   NA
 7753448 7753449 CDR20291_1521 CDR20291_1522   vanR FALSE 0.012 434.000 0.000 1.000 N NA
 7753449 7753450 CDR20291_1522 CDR20291_1523 vanR vanS TRUE 0.988 50.000 0.231 1.000 Y NA
 7753450 7753451 CDR20291_1523 CDR20291_1524 vanS vanG FALSE 0.041 261.000 0.000 1.000 N NA
 7753451 7753452 CDR20291_1524 CDR20291_1525 vanG   TRUE 0.996 0.000 0.015 1.000 Y NA
 7753452 7753453 CDR20291_1525 CDR20291_1526   vanTG TRUE 0.997 18.000 0.174 1.000 Y NA
 7753453 7753454 CDR20291_1526 CDR20291_1527 vanTG   FALSE 0.025 314.000 0.000 NA   NA
 7753455 7753456 CDR20291_1528 CDR20291_1529   sodA TRUE 0.427 80.000 0.000 NA   NA
 7753459 7753460 CDR20291_1532 CDR20291_1533     TRUE 0.950 39.000 0.000 0.002 Y NA
 7753460 7753461 CDR20291_1533 CDR20291_1534