MicrobesOnline Operon Predictions for Candidatus Sulcia muelleri DMIN

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 10418892 10418893 DMIN_00010 DMIN_00020     FALSE 0.012 32.000 0.000 1.000 N NA
 10418893 10418894 DMIN_00020 DMIN_00030     FALSE 0.079 2.000 0.000 1.000 N NA
 10418894 10418895 DMIN_00030 DMIN_00040     FALSE 0.015 12.000 0.000 1.000 N NA
 10418895 10418896 DMIN_00040 DMIN_00050     FALSE 0.322 13.000 0.015 1.000 N NA
 10418896 10418897 DMIN_00050 DMIN_00060     FALSE 0.012 23.000 0.000 1.000 N NA
 10418897 10418898 DMIN_00060 DMIN_00070     TRUE 0.659 -13.000 0.003 1.000 N NA
 10418898 10418899 DMIN_00070 DMIN_00080     FALSE 0.013 288.000 0.000 1.000 N NA
 10418899 10418900 DMIN_00080 DMIN_00090     FALSE 0.013 64.000 0.000 1.000 N NA
 10418902 10418903 DMIN_00110 DMIN_00120     FALSE 0.517 10.000 0.000 NA   NA
 10418903 10418904 DMIN_00120 DMIN_00130     TRUE 0.834 -49.000 0.000 NA   NA
 10418905 10418906 DMIN_00140 DMIN_00150     TRUE 0.976 -25.000 0.034 1.000 Y NA
 10418906 10418907 DMIN_00150 DMIN_00160     FALSE 0.394 12.000 0.000 1.000   NA
 10418907 10418908 DMIN_00160 DMIN_00170     TRUE 0.936 0.000 0.005 0.039   NA
 10418909 10418910 DMIN_00180 DMIN_00190     FALSE 0.406 40.000 0.000 NA   NA
 10418910 10418911 DMIN_00190 DMIN_00200     FALSE 0.407 18.000 0.000 NA   NA
 10418912 10418913 DMIN_00210 DMIN_00220     FALSE 0.404 34.000 0.000 NA   NA
 10418913 10418914 DMIN_00220 DMIN_00230     FALSE 0.380 6.000 0.002 1.000 N NA
 10418914 10418915 DMIN_00230 DMIN_00240     TRUE 0.951 -10.000 0.045 NA   NA
 10418918 10418919 DMIN_00270 DMIN_00280     TRUE 0.792 -3.000 0.074 1.000 N NA
 10418919 10418920 DMIN_00280 DMIN_00290     FALSE 0.091 -4.000 0.000 1.000 N NA
 10418921 10418922 DMIN_00300 DMIN_00310     TRUE 0.972 0.000 0.846 0.029 Y NA
 10418922 10418923 DMIN_00310 DMIN_00320     TRUE 0.813 -22.000 0.000 0.038   NA
 10418923 10418924 DMIN_00320 DMIN_00330     TRUE 0.816 -16.000 0.000 0.038   NA
 10418924 10418925 DMIN_00330 DMIN_00340     TRUE 0.745 11.000 0.402 0.029   NA
 10418925 10418926 DMIN_00340 DMIN_00350     TRUE 0.908 5.000 0.628 0.038   NA
 10418926 10418927 DMIN_00350 DMIN_00360     FALSE 0.013 128.000 0.000 1.000 N NA
 10418927 10418928 DMIN_00360 DMIN_00370     FALSE 0.013 137.000 0.000 NA N NA
 10418928 10418929 DMIN_00370 DMIN_00380     FALSE 0.496 9.000 0.008 NA N NA
 10418929 10418930 DMIN_00380 DMIN_00390     TRUE 0.973 3.000 0.147 0.014 Y NA
 10418930 10418931 DMIN_00390 DMIN_00400     TRUE 0.850 33.000 0.449 0.010 Y NA
 10418931 10418932 DMIN_00400 DMIN_00410     TRUE 0.974 2.000 0.088 1.000 Y NA
 10418933 10418934 DMIN_00420 DMIN_00430     TRUE 0.749 16.000 0.002 1.000 Y NA
 10418934 10418935 DMIN_00430 DMIN_00440     FALSE 0.406 42.000 0.000 NA   NA
 10418935 10418936 DMIN_00440 DMIN_00450     FALSE 0.403 26.000 0.000 NA   NA
 10418936 10418937 DMIN_00450 DMIN_00460     FALSE 0.091 -6.000 0.000 1.000 N NA
 10418937 10418938 DMIN_00460 DMIN_00470     TRUE 0.952 4.000 0.002 NA Y NA
 10418938 10418939 DMIN_00470 DMIN_00480     TRUE 0.951 -19.000 0.332 NA   NA
 10418939 10418940 DMIN_00480 DMIN_00490     TRUE 0.654 7.000 0.000 NA   NA
 10418941 10418942 DMIN_00500 DMIN_00510     FALSE 0.403 25.000 0.000 NA   NA
 10418944 10418945 DMIN_00530 DMIN_00540     TRUE 0.929 7.000 0.851 0.014 Y NA
 10418945 10418946 DMIN_00540 DMIN_00550     FALSE 0.020 10.000 0.000 1.000 N NA
 10418946 10418947 DMIN_00550 DMIN_00560     TRUE 0.977 -3.000 0.302 1.000 Y NA
 10418947 10418948 DMIN_00560 DMIN_00570     TRUE 0.976 -13.000 0.838 NA Y NA
 10418948 10418949 DMIN_00570 DMIN_00580     FALSE 0.415 163.000 0.000 NA   NA
 10418949 10418950 DMIN_00580 DMIN_00590     TRUE 0.654 7.000 0.000 NA   NA
 10418950 10418951 DMIN_00590 DMIN_00600     FALSE 0.407 49.000 0.000 NA   NA
 10418951 10418952 DMIN_00600 DMIN_00610     FALSE 0.407 18.000 0.000 NA   NA
 10418952 10418953 DMIN_00610 DMIN_00620     TRUE 0.717 6.000 0.000 NA   NA
 10418953 10418954 DMIN_00620 DMIN_00630     FALSE 0.473 11.000 0.000 NA   NA
 10418955 10418956 DMIN_00640 DMIN_00650     TRUE 0.695 22.000 0.679 NA   NA
 10418956 10418957 DMIN_00650 DMIN_00660     TRUE 0.976 2.000 0.550 NA Y NA
 10418957 10418958 DMIN_00660 DMIN_00670     TRUE 0.932 3.000 0.730 NA   NA
 10418958 10418959 DMIN_00670 DMIN_00680     TRUE 0.876 7.000 0.244 NA   NA
 10418959 10418960 DMIN_00680 DMIN_00690     TRUE 0.904 6.000 0.282 NA   NA
 10418961 10418962 DMIN_00700 DMIN_00710     TRUE 0.627 16.000 0.004 1.000   NA
 10418963 10418964 DMIN_00720 DMIN_00730     FALSE 0.413 80.000 0.000 NA   NA
 10418964 10418965 DMIN_00730 DMIN_00740     TRUE 0.763 5.000 0.000 NA   NA
 10418965 10418966 DMIN_00740 DMIN_00750     FALSE 0.404 35.000 0.000 NA   NA
 10418966 10418967 DMIN_00750 DMIN_00760     FALSE 0.407 49.000 0.000 NA   NA
 10418967 10418968 DMIN_00760 DMIN_00770     FALSE 0.410 17.000 0.000 NA   NA
 10418970 10418971 DMIN_00790 DMIN_00800     TRUE 0.859 13.000 0.069 1.000 Y NA
 10418971 10418972 DMIN_00800 DMIN_00810     FALSE 0.083 1.000 0.000 1.000 N NA
 10418972 10418973 DMIN_00810 DMIN_00820     TRUE 0.844 -9.000 0.000 NA   NA
 10418973 10418974 DMIN_00820 DMIN_00830     TRUE 0.717 6.000 0.000 NA   NA
 10418975 10418976 DMIN_00840 DMIN_00850     TRUE 0.946 7.000 0.060 NA Y NA
 10418976 10418977 DMIN_00850 DMIN_00860     TRUE 0.980 -13.000 0.231 NA Y NA
 10418978 10418979 DMIN_00870 DMIN_00880     FALSE 0.054 33.000 0.002 1.000 N NA
 10418979 10418980 DMIN_00880 DMIN_00890     TRUE 0.897 6.000 0.652 NA   NA
 10418980 10418981 DMIN_00890 DMIN_00900     TRUE 0.847 7.000 0.928 NA   NA
 10418982 10418983 DMIN_00910 DMIN_00920     TRUE 0.593 6.000 0.005 1.000 N NA
 10418984 10418985 DMIN_00930 DMIN_00940     TRUE 0.829 22.000 0.005 1.000 Y NA
 10418986 10418987 DMIN_00950 DMIN_00960     TRUE 0.887 9.000 0.003 1.000 Y NA
 10418987 10418988 DMIN_00960 DMIN_00970     TRUE 0.755 -3.000 0.006 1.000 N NA
 10418988 10418989 DMIN_00970 DMIN_00980     TRUE 0.864 13.000 0.088 0.022 Y NA
 10418990 10418991 DMIN_00990 DMIN_01000     FALSE 0.013 62.000 0.000 NA N NA
 10418993 10418994 DMIN_01020 DMIN_01030     FALSE 0.405 37.000 0.000 NA   NA
 10418994 10418995 DMIN_01030 DMIN_01040     FALSE 0.410 64.000 0.000 NA   NA
 10418995 10418996 DMIN_01040 DMIN_01050     FALSE 0.245 24.000 0.004 1.000 N NA
 10418996 10418997 DMIN_01050 DMIN_01060     TRUE 0.979 -7.000 0.060 0.022 Y NA
 10418997 10418998 DMIN_01060 DMIN_01070     TRUE 0.976 0.000 0.059 1.000 Y NA
 10418998 10418999 DMIN_01070 DMIN_01080     TRUE 0.977 -10.000 0.044 1.000 Y NA
 10418999 10419000 DMIN_01080 DMIN_01090     TRUE 0.979 -3.000 0.167 0.009 Y NA
 10419000 10419001 DMIN_01090 DMIN_01100     TRUE 0.976 0.000 0.040 1.000 Y NA
 10419001 10419002 DMIN_01100 DMIN_01110     TRUE 0.977 -3.000 0.056 1.000 Y NA
 10419002 10419003 DMIN_01110 DMIN_01120     TRUE 0.978 -9.000 0.053 1.000 Y NA
 10419003 10419004 DMIN_01120 DMIN_01130     FALSE 0.517 10.000 0.000 NA   NA
 10419006 10419007 DMIN_01150 DMIN_01160     FALSE 0.406 8.000 0.004 1.000 N NA
 10419008 10419009 DMIN_01170 DMIN_01180     TRUE 0.979 -7.000 0.146 0.009 Y NA
 10419009 10419010 DMIN_01180 DMIN_01190     TRUE 0.978 -7.000 0.016 0.013 Y NA
 10419010 10419011 DMIN_01190 DMIN_01200     TRUE 0.977 0.000 0.216 1.000 Y NA
 10419011 10419012 DMIN_01200 DMIN_01210     TRUE 0.977 -3.000 0.058 1.000 Y NA
 10419012 10419013 DMIN_01210 DMIN_01220     TRUE 0.924 8.000 0.520 0.009 Y NA
 10419016 10419017 DMIN_01250 DMIN_01260     FALSE 0.329 11.000 0.005 1.000 N NA
 10419017 10419018 DMIN_01260 DMIN_01270     TRUE 0.717 6.000 0.000 NA   NA
 10419018 10419019 DMIN_01270 DMIN_01280     FALSE 0.405 21.000 0.000 NA   NA
 10419019 10419020 DMIN_01280 DMIN_01290     FALSE 0.153 7.000 0.002 1.000 N NA
 10419021 10419022 DMIN_01300 DMIN_01310     FALSE 0.263 13.000 0.004 1.000 N NA
 10419023 10419024 DMIN_01320 DMIN_01330     TRUE 0.911 -9.000 0.002 NA   NA
 10419024 10419025 DMIN_01330 DMIN_01340     TRUE 0.813 -6.000 0.000 1.000   NA
 10419026 10419027 DMIN_01350 DMIN_01360     TRUE 0.968 4.000 0.233 1.000 Y NA
 10419027 10419028 DMIN_01360 DMIN_01370     TRUE 0.974 2.000 0.133 1.000 Y NA
 10419028 10419029 DMIN_01370 DMIN_01380     FALSE 0.402 29.000 0.000 NA   NA
 10419029 10419030 DMIN_01380 DMIN_01390     FALSE 0.403 23.000 0.000 NA   NA
 10419030 10419031 DMIN_01390 DMIN_01400     TRUE 0.821 2.000 0.000 NA   NA
 10419031 10419032 DMIN_01400 DMIN_01410     FALSE 0.473 11.000 0.000 NA   NA
 10419032 10419033 DMIN_01410 DMIN_01420     TRUE 0.710 65.000 0.017 NA   NA
 10419033 10419034 DMIN_01420 DMIN_01430     TRUE 0.931 4.000 0.045 NA   NA
 10419034 10419035 DMIN_01430 DMIN_01440     TRUE 0.702 185.000 0.044 0.008   NA
 10419035 10419036 DMIN_01440 DMIN_01450     TRUE 0.953 -10.000 0.133 NA   NA
 10419036 10419037 DMIN_01450 DMIN_01460     TRUE 0.693 26.000 0.713 NA   NA
 10419037 10419038 DMIN_01460 DMIN_01470     TRUE 0.529 29.000 0.002 1.000   NA
 10419038 10419039 DMIN_01470 DMIN_01480     TRUE 0.898 -3.000 0.002 1.000   NA
 10419039 10419040 DMIN_01480 DMIN_01490     TRUE 0.921 -28.000 0.002 NA   NA
 10419042 10419043 DMIN_01510 DMIN_01520     TRUE 0.821 2.000 0.000 NA   NA
 10419043 10419044 DMIN_01520 DMIN_01530     FALSE 0.405 39.000 0.000 NA   NA
 10419044 10419045 DMIN_01530 DMIN_01540     TRUE 0.654 7.000 0.000 NA   NA
 10419045 10419046 DMIN_01540 DMIN_01550     FALSE 0.407 18.000 0.000 NA   NA
 10419046 10419047 DMIN_01550 DMIN_01560     FALSE 0.072 3.000 0.000 0.037 N NA
 10419047 10419048 DMIN_01560 DMIN_01570     FALSE 0.092 -7.000 0.000 1.000 N NA
 10419049 10419050 DMIN_01580 DMIN_01590     FALSE 0.517 10.000 0.000 NA   NA
 10419052 10419053 DMIN_01610 DMIN_01620     FALSE 0.517 10.000 0.000 NA   NA
 10419053 10419054 DMIN_01620 DMIN_01630     FALSE 0.403 31.000 0.000 NA   NA
 10419054 10419055 DMIN_01630 DMIN_01640     FALSE 0.403 24.000 0.000 NA   NA
 10419055 10419056 DMIN_01640 DMIN_01650     TRUE 0.956 6.000 0.667 NA Y NA
 10419056 10419057 DMIN_01650 DMIN_01660     TRUE 0.654 7.000 0.000 NA   NA
 10419057 10419058 DMIN_01660 DMIN_167     FALSE 0.517 10.000 0.000 NA   NA
 10419058 10419059 DMIN_167 DMIN_01670     FALSE 0.405 21.000 0.000 NA   NA
 10419059 10419060 DMIN_01670 DMIN_01680     TRUE 0.864 18.000 0.319 NA Y NA
 10419061 10419062 DMIN_01690 DMIN_01700     TRUE 0.840 -19.000 0.000 NA   NA
 10419062 10419063 DMIN_01700 DMIN_01710     TRUE 0.809 -19.000 0.000 1.000   NA
 10419064 10419065 DMIN_01720 DMIN_01730     FALSE 0.476 4.000 0.002 0.085 N NA
 10419065 10419066 DMIN_01730 DMIN_01740     TRUE 0.701 5.000 0.081 1.000 N NA
 10419066 10419067 DMIN_01740 DMIN_01750     FALSE 0.015 12.000 0.000 1.000 N NA
 10419068 10419069 DMIN_01760 DMIN_01770     TRUE 0.889 -28.000 0.002 1.000   NA
 10419069 10419070 DMIN_01770 DMIN_01780     FALSE 0.403 24.000 0.000 NA   NA
 10419070 10419071 DMIN_01780 DMIN_01790     FALSE 0.473 11.000 0.000 NA   NA
 10419072 10419073 DMIN_01800 DMIN_01810     FALSE 0.403 22.000 0.000 NA   NA
 10419073 10419074 DMIN_01810 DMIN_01820     TRUE 0.961 5.000 0.667 1.000 Y NA
 10419074 10419075 DMIN_01820 DMIN_01830     FALSE 0.434 9.000 0.004 NA N NA
 10419077 10419078 DMIN_186 DMIN_01860     FALSE 0.412 70.000 0.000 NA   NA
 10419079 10419080 DMIN_01870 DMIN_01880     TRUE 0.903 9.000 0.774 1.000 Y NA
 10419080 10419081 DMIN_01880 DMIN_01890     FALSE 0.013 231.000 0.000 1.000 N NA
 10419082 10419083 DMIN_01900 DMIN_01910     TRUE 0.846 18.000 0.466 1.000 Y NA
 10419083 10419084 DMIN_01910 DMIN_01920     TRUE 0.921 8.000 0.482 1.000 Y NA
 10419084 10419085 DMIN_01920 DMIN_01930     TRUE 0.732 4.000 0.101 1.000 N NA
 10419085 10419086 DMIN_01930 DMIN_01940     FALSE 0.013 45.000 0.000 1.000 N NA
 10419087 10419088 DMIN_01950 DMIN_01960     TRUE 0.840 18.000 0.014 1.000 Y NA
 10419088 10419089 DMIN_01960 DMIN_01970     TRUE 0.969 -46.000 0.003 1.000 Y NA
 10419089 10419090 DMIN_01970 DMIN_01980     TRUE 0.551 22.000 0.002 1.000   NA
 10419090 10419091 DMIN_01980 DMIN_01990     FALSE 0.407 18.000 0.000 NA   NA
 10419091 10419092 DMIN_01990 DMIN_02000     TRUE 0.829 1.000 0.000 NA   NA
 10419092 10419093 DMIN_02000 DMIN_02010     FALSE 0.016 11.000 0.000 NA N NA
 10419093 10419094 DMIN_02010 DMIN_02020     FALSE 0.402 27.000 0.000 NA   NA
 10419094 10419095 DMIN_02020 DMIN_02030     TRUE 0.829 1.000 0.000 NA   NA
 10419095 10419096 DMIN_02030 DMIN_02040     FALSE 0.218 13.000 0.003 1.000 N NA
 10419097 10419098 DMIN_02050 DMIN_02060     FALSE 0.116 24.000 0.002 1.000 N NA
 10419101 10419102 DMIN_02090 DMIN_02100     TRUE 0.738 -3.000 0.005 1.000 N NA
 10419102 10419103 DMIN_02100 DMIN_02110     TRUE 0.862 37.000 0.335 NA Y NA
 10419103 10419104 DMIN_02110 DMIN_02120     FALSE 0.189 10.000 0.002 NA N NA
 10419105 10419106 DMIN_02130 DMIN_02140     TRUE 0.817 55.000 0.003 NA Y NA
 10419106 10419107 DMIN_02140 DMIN_02150     TRUE 0.977 -3.000 0.620 0.031 Y NA
 10419107 10419108 DMIN_02150 DMIN_02160     TRUE 0.855 14.000 0.077 1.000 Y NA
 10419108 10419109 DMIN_02160 DMIN_02170     TRUE 0.924 8.000 0.075 1.000 Y NA
 10419109 10419110 DMIN_02170 DMIN_02180     TRUE 0.958 6.000 0.467 NA Y NA
 10419110 10419111 DMIN_02180 DMIN_02190     TRUE 0.979 -3.000 0.544 NA Y NA
 10419111 10419112 DMIN_02190 DMIN_02200     TRUE 0.807 3.000 0.000 NA   NA
 10419112 10419113 DMIN_02200 DMIN_02210     TRUE 0.844 -9.000 0.000 NA   NA
 10419113 10419114 DMIN_02210 DMIN_02220     TRUE 0.911 8.000 0.820 1.000 Y NA
 10419114 10419115 DMIN_02220 DMIN_02230     TRUE 0.915 8.000 0.769 1.000 Y NA
 10419115 10419116 DMIN_02230 DMIN_02240     TRUE 0.976 -10.000 0.719 1.000 Y NA
 10419116 10419117 DMIN_02240 DMIN_02250     TRUE 0.842 36.000 0.828 NA Y NA
 10419117 10419118 DMIN_02250 DMIN_02260     TRUE 0.979 -7.000 0.009 NA Y NA
 10419118 10419119 DMIN_02260 DMIN_02270     TRUE 0.898 10.000 0.791 NA Y NA
 10419119 10419120 DMIN_02270 DMIN_02280     TRUE 0.812 31.000 0.003 NA Y NA
 10419120 10419121 DMIN_02280 DMIN_02290     TRUE 0.981 -7.000 0.309 NA Y NA
 10419121 10419122 DMIN_02290 DMIN_02300     TRUE 0.975 3.000 0.295 NA Y NA
 10419122 10419123 DMIN_02300 DMIN_02310     TRUE 0.868 12.000 0.808 NA Y NA
 10419123 10419124 DMIN_02310 DMIN_02320     TRUE 0.938 7.000 0.815 NA Y NA
 10419124 10419125 DMIN_02320 DMIN_02330     TRUE 0.856 13.000 0.814 NA Y NA
 10419125 10419126 DMIN_02330 DMIN_02340     TRUE 0.848 27.000 0.148 1.000 Y NA
 10419126 10419127 DMIN_02340 DMIN_02350     TRUE 0.710 3.000 0.730 1.000 N NA
 10419127 10419128 DMIN_02350 DMIN_02360     FALSE 0.371 12.000 0.083 1.000 N NA
 10419128 10419129 DMIN_02360 DMIN_02370     TRUE 0.945 2.000 0.078 NA   NA
 10419129 10419130 DMIN_02370 DMIN_02380     TRUE 0.950 0.000 0.067 NA   NA
 10419130 10419131 DMIN_02380 DMIN_02390     TRUE 0.963 5.000 0.810 NA Y NA
 10419131 10419132 DMIN_02390 DMIN_02400     TRUE 0.870 13.000 0.509 NA Y NA
 10419132 10419133 DMIN_02400 DMIN_02410     FALSE 0.315 14.000 0.549 1.000 N NA
 10419133 10419134 DMIN_02410 DMIN_02420     TRUE 0.763 -22.000 0.873 NA N NA
 10419137 10419138 DMIN_02450 DMIN_02460     TRUE 0.868 5.000 0.002 1.000   NA
 10419141 10419142 DMIN_02490 DMIN_02500     TRUE 0.872 12.000 0.101 0.042 Y NA
 10419147 10419148 DMIN_02550 DMIN_02560     FALSE 0.076 10.000 0.002 1.000 N NA
 10419148 10419149 DMIN_02560 DMIN_02570     TRUE 0.847 73.000 0.033 1.000 Y NA
 10419149 10419150 DMIN_02570 DMIN_02580     TRUE 0.694 10.000 0.002 NA   NA
 10419150 10419151 DMIN_02580 DMIN_02590     TRUE 0.919 5.000 0.022 NA   NA
 10419151 10419152 DMIN_02590 DMIN_02600     TRUE 0.977 0.000 0.484 0.011 Y NA