MicrobesOnline Operon Predictions for Helicobacter pylori B38

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 7690281 7690282 HELPY_0001 HELPY_0002 nusB ribE TRUE 0.929 2.000 0.045 1.000 N NA
 7690282 7690283 HELPY_0002 HELPY_0003 ribE kdsA TRUE 0.937 10.000 0.027 1.000 N NA
 7690283 7690284 HELPY_0003 HELPY_0004 kdsA icfA TRUE 0.906 -13.000 0.025 1.000 N NA
 7690285 7690286 HELPY_0005 HELPY_0006 pyrF panC TRUE 0.912 1.000 0.012 1.000 N NA
 7690287 7690288 HELPY_tRNA36 HELPY_tRNA35     FALSE 0.262 64.000 0.000 NA   NA
 7690288 7690289 HELPY_tRNA35 HELPY_tRNA34     FALSE 0.401 41.000 0.000 NA   NA
 7690289 7690290 HELPY_tRNA34 HELPY_tRNA33     FALSE 0.401 41.000 0.000 NA   NA
 7690290 7690291 HELPY_tRNA33 HELPY_tRNA32     TRUE 0.835 11.000 0.000 NA   NA
 7690291 7690292 HELPY_tRNA32 HELPY_0007   hopZ FALSE 0.021 453.000 0.000 NA   NA
 7690292 7690293 HELPY_0007 HELPY_0008 hopZ groEL FALSE 0.025 348.000 0.000 NA   NA
 7690293 7690294 HELPY_0008 HELPY_0009 groEL groES TRUE 0.931 26.000 0.356 1.000 Y NA
 7690295 7690296 HELPY_0010 HELPY_0011 dnaG   TRUE 0.951 -3.000 0.035 1.000 N NA
 7690296 7690297 HELPY_0011 HELPY_0012     FALSE 0.236 90.000 0.012 NA   NA
 7690297 7690298 HELPY_0012 HELPY_0013     FALSE 0.272 146.000 0.235 NA   NA
 7690298 7690299 HELPY_0013 HELPY_0014     TRUE 0.979 0.000 1.000 NA   NA
 7690299 7690300 HELPY_0014 HELPY_0015   comB4 TRUE 0.971 2.000 1.000 NA   NA
 7690302 7690303 HELPY_0016 HELPY_0017   cheV1 FALSE 0.297 108.000 0.071 NA   NA
 7690303 7690304 HELPY_0017 HELPY_0018 cheV1 nspC TRUE 0.954 -3.000 0.042 1.000 N NA
 7690305 7690306 HELPY_0019 HELPY_0020     TRUE 0.978 11.000 0.714 1.000   NA
 7690306 7690307 HELPY_0020 HELPY_0021     TRUE 0.493 32.000 0.000 NA   NA
 7690307 7690308 HELPY_0021 HELPY_0022   hopD FALSE 0.020 468.000 0.000 NA   NA
 7690308 7690309 HELPY_0022 HELPY_0024 hopD gltA FALSE 0.019 531.000 0.000 NA   NA
 7690310 7690311 HELPY_0025 HELPY_0026 icd   FALSE 0.363 67.000 0.021 NA   NA
 7690312 7690313 HELPY_0027 HELPY_0028 bioD   TRUE 0.860 4.000 0.020 NA   NA
 7690314 7690315 HELPY_0029 HELPY_0030   clpS TRUE 0.862 15.000 0.021 NA   NA
 7690315 7690316 HELPY_0030 HELPY_0031 clpS clpA TRUE 0.971 0.000 0.596 NA   NA
 7690316 7690317 HELPY_0031 HELPY_0032 clpA panD TRUE 0.903 2.000 0.014 1.000 N NA
 7690317 7690318 HELPY_0032 HELPY_0033 panD   TRUE 0.874 3.000 0.029 NA   NA
 7690318 7690319 HELPY_0033 HELPY_0034     TRUE 0.903 -3.000 0.017 NA   NA
 7690319 7690320 HELPY_0034 HELPY_0035     TRUE 0.968 8.000 0.533 1.000   NA
 7690320 7690321 HELPY_0035 HELPY_0036   comB8 TRUE 0.592 126.000 0.750 NA Y NA
 7690321 7690322 HELPY_0036 HELPY_0037 comB8 comB9 TRUE 0.988 0.000 1.000 NA Y NA
 7690322 7690323 HELPY_0037 HELPY_0038 comB9 comB10 TRUE 0.975 -7.000 0.375 NA Y NA
 7690323 7690324 HELPY_0038 HELPY_0039 comB10 manC TRUE 0.455 71.000 0.020 1.000 N NA
 7690324 7690325 HELPY_0039 HELPY_0040 manC gmd TRUE 0.793 41.000 0.054 1.000 Y NA
 7690325 7690326 HELPY_0040 HELPY_0041 gmd fcl TRUE 0.990 -7.000 0.381 0.007 Y NA
 7690327 7690328 HELPY_0042 HELPY_0043 hypE hypF TRUE 0.970 12.000 0.079 1.000 Y NA
 7690328 7690329 HELPY_0043 HELPY_0044 hypF   TRUE 0.882 -24.000 0.023 1.000 N NA
 7690329 7690330 HELPY_0044 HELPY_0045   hpy99VM TRUE 0.651 52.000 0.061 1.000 N NA
 7690330 7690331 HELPY_0045 HELPY_0046 hpy99VM   TRUE 0.854 -3.000 0.000 NA   NA
 7690331 7690332 HELPY_0046 HELPY_0047     TRUE 0.854 -3.000 0.000 NA   NA
 7690332 7690333 HELPY_0047 HELPY_0048     FALSE 0.421 40.000 0.000 NA   NA
 7690333 7690334 HELPY_0048 HELPY_0049   putA TRUE 0.863 27.000 0.141 1.000 N NA
 7690335 7690336 HELPY_0050 HELPY_0051     FALSE 0.027 323.000 0.000 NA   NA
 7690336 7690337 HELPY_0051 HELPY_0052     TRUE 0.807 1.000 0.000 NA   NA
 7690337 7690338 HELPY_0052 HELPY_0053     TRUE 0.835 11.000 0.000 NA   NA
 7690338 7690339 HELPY_0053 HELPY_0054     TRUE 0.705 -34.000 0.000 NA   NA
 7690339 7690340 HELPY_0054 HELPY_0055     TRUE 0.854 -3.000 0.000 NA   NA
 7690340 7690341 HELPY_0055 HELPY_0056     TRUE 0.937 16.000 0.286 NA   NA
 7690341 7690342 HELPY_0056 HELPY_0057     TRUE 0.835 11.000 0.000 NA   NA
 7690342 7690343 HELPY_0057 HELPY_0058     TRUE 0.485 33.000 0.000 NA   NA
 7690343 7690344 HELPY_0058 HELPY_0059     TRUE 0.960 2.000 0.636 NA   NA
 7690344 7690345 HELPY_0059 HELPY_0060     TRUE 0.817 -7.000 0.000 NA   NA
 7690345 7690346 HELPY_0060 HELPY_0061     TRUE 0.788 5.000 0.000 NA   NA
 7690346 7690347 HELPY_0061 HELPY_0062     TRUE 0.803 8.000 0.000 NA   NA
 7690348 7690349 HELPY_0063 HELPY_0064 ureH ureG TRUE 0.991 0.000 0.337 0.009 Y NA
 7690349 7690350 HELPY_0064 HELPY_0065 ureG ureF TRUE 0.964 29.000 0.439 0.009 Y NA
 7690350 7690351 HELPY_0065 HELPY_0066 ureF ureE TRUE 0.974 24.000 0.460 0.009 Y NA
 7690351 7690352 HELPY_0066 HELPY_0067 ureE ureI TRUE 0.934 2.000 0.096 1.000   NA
 7690352 7690353 HELPY_0067 HELPY_0068 ureI ureB FALSE 0.117 193.000 0.019 1.000   NA
 7690353 7690354 HELPY_0068 HELPY_0069 ureB ureA TRUE 0.980 4.000 0.045 0.002 Y NA
 7690354 7690355 HELPY_0069 HELPY_tRNA31 ureA   FALSE 0.038 250.000 0.000 NA   NA
 7690355 7690356 HELPY_tRNA31 HELPY_0071   lspA TRUE 0.687 21.000 0.000 NA   NA
 7690356 7690357 HELPY_0071 HELPY_0072 lspA ureC TRUE 0.946 -6.000 0.042 1.000 N NA
 7690358 7690359 HELPY_0073 HELPY_0074 rpsT prfA FALSE 0.340 128.000 0.029 1.000 Y NA
 7690359 7690360 HELPY_0074 HELPY_0075 prfA   FALSE 0.024 396.000 0.000 NA   NA
 7690360 7690361 HELPY_0075 HELPY_0076     TRUE 0.835 11.000 0.000 NA   NA
 7690361 7690362 HELPY_0076 HELPY_0077     FALSE 0.037 252.000 0.000 NA   NA
 7690363 7690364 HELPY_0078 HELPY_0080 tlpC rpsI FALSE 0.174 141.000 0.008 1.000 N NA
 7690364 7690365 HELPY_0080 HELPY_0081 rpsI rplM TRUE 0.990 -3.000 0.231 0.039 Y NA
 7690365 7690366 HELPY_0081 HELPY_0082 rplM   FALSE 0.028 310.000 0.000 NA   NA
 7690366 7690367 HELPY_0082 HELPY_0083   mqo TRUE 0.938 6.000 0.216 NA   NA
 7690367 7690368 HELPY_0083 HELPY_0084 mqo   TRUE 0.574 54.000 0.096 NA   NA
 7690368 7690369 HELPY_0084 HELPY_0085   rpoD TRUE 0.778 21.000 0.017 NA   NA
 7690369 7690370 HELPY_0085 HELPY_0086 rpoD   FALSE 0.074 280.000 0.011 1.000 N NA
 7690370 7690371 HELPY_0086 HELPY_0087   fabD TRUE 0.945 11.000 0.037 1.000 N NA
 7690372 7690373 HELPY_tRNA1 HELPY_0088     FALSE 0.051 205.000 0.000 NA   NA
 7690373 7690374 HELPY_0088 HELPY_0089     TRUE 0.696 -39.000 0.000 NA   NA
 7690374 7690375 HELPY_0089 HELPY_0090   hpyAIIIM TRUE 0.832 -6.000 0.000 NA   NA
 7690376 7690377 HELPY_0091 HELPY_0092 futC   TRUE 0.467 100.000 0.364 NA   NA
 7690379 7690380 HELPY_0094 HELPY_0095   thrC FALSE 0.188 105.000 0.012 NA   NA
 7690381 7690382 HELPY_0097 HELPY_0098     TRUE 0.903 0.000 0.024 NA   NA
 7690382 7690383 HELPY_0098 HELPY_0099     FALSE 0.064 213.000 0.010 NA   NA
 7690384 7690385 HELPY_0100 HELPY_0101   tlpB TRUE 0.891 32.000 0.700 NA N NA
 7690385 7690386 HELPY_0101 HELPY_0102 tlpB cpdB FALSE 0.089 203.000 0.000 1.000 N NA
 7690386 7690387 HELPY_0102 HELPY_0104 cpdB luxS FALSE 0.194 144.000 0.016 1.000 N NA
 7690387 7690388 HELPY_0104 HELPY_0105 luxS metB TRUE 0.745 38.000 0.048 1.000 N NA
 7690388 7690389 HELPY_0105 HELPY_0106 metB cysK TRUE 0.976 25.000 0.690 0.015 Y NA
 7690390 7690391 HELPY_0107 HELPY_0108     TRUE 0.666 -151.000 0.000 NA   NA
 7690392 7690393 HELPY_0109 HELPY_0110 dnaK grpE TRUE 0.909 31.000 0.029 0.012 Y NA
 7690393 7690394 HELPY_0110 HELPY_0111 grpE hrcA TRUE 0.946 0.000 0.038 1.000 N NA
 7690395 7690396 HELPY_0112 HELPY_0113     TRUE 0.836 21.000 0.047 NA   NA
 7690397 7690398 HELPY_0114 HELPY_0115   flaB TRUE 0.772 50.000 0.700 NA   NA
 7690399 7690400 HELPY_0116 HELPY_0117 topA   TRUE 0.913 -7.000 0.010 1.000 N NA
 7690401 7690402 HELPY_0118 HELPY_0119     TRUE 0.678 -75.000 0.000 NA   NA
 7690402 7690403 HELPY_0119 HELPY_0120   pps FALSE 0.092 132.000 0.000 NA   NA
 7690404 7690405 HELPY_0121 HELPY_0122   thrS TRUE 0.655 41.000 0.076 NA   NA
 7690405 7690406 HELPY_0122 HELPY_0123 thrS infC TRUE 0.972 -3.000 0.060 1.000 Y NA
 7690406 7690407 HELPY_0123 HELPY_0124 infC rpmL TRUE 0.975 -19.000 0.652 1.000 Y NA
 7690407 7690408 HELPY_0124 HELPY_0125 rpmL rplT TRUE 0.862 94.000 0.928 0.038 Y NA
 7690408 7690409 HELPY_0125 HELPY_0126 rplT horB FALSE 0.066 200.000 0.007 NA   NA
 7690409 7690410 HELPY_0126 HELPY_0127 horB   TRUE 0.778 43.000 0.500 NA   NA
 7690410 7690411 HELPY_0127 HELPY_0128     FALSE 0.312 173.000 0.600 NA   NA
 7690411 7690412 HELPY_0128 HELPY_0130     FALSE 0.022 413.000 0.000 NA   NA
 7690413 7690414 HELPY_0132 HELPY_0133 sdaA sdaC TRUE 0.982 0.000 0.350 1.000 Y NA
 7690415 7690416 HELPY_0134 HELPY_0136 aroF   FALSE 0.045 289.000 0.012 NA   NA
 7690417 7690418 HELPY_0137 HELPY_0138 bcp   TRUE 0.899 10.000 0.009 1.000   NA
 7690418 7690419 HELPY_0138 HELPY_0139     TRUE 0.981 -7.000 0.209 0.003   NA
 7690419 7690420 HELPY_0139 HELPY_0140     TRUE 0.940 29.000 0.657 1.000 Y NA
 7690421 7690422 HELPY_0142 HELPY_0143     TRUE 0.940 50.000 0.625 0.002 Y NA
 7690423 7690424 HELPY_0144 HELPY_0145 mutY   FALSE 0.221 115.000 0.008 1.000 N NA
 7690425 7690426 HELPY_0147 HELPY_0149 fixN fixO TRUE 0.986 13.000 0.283 0.004 N NA
 7690426 7690427 HELPY_0149 HELPY_0150 fixO fixQ TRUE 0.990 8.000 0.738 0.004 N NA
 7690427 7690428 HELPY_0150 HELPY_0151 fixQ fixP TRUE 0.982 2.000 0.262 0.004 N NA
 7690428 7690429 HELPY_0151 HELPY_0152 fixP   TRUE 0.973 11.000 0.727 NA   NA
 7690429 7690430 HELPY_0152 HELPY_0153     TRUE 0.463 101.000 0.375 NA   NA
 7690430 7690431 HELPY_0153 HELPY_0154     TRUE 0.960 13.000 0.438 NA   NA
 7690431 7690432 HELPY_0154 HELPY_0155     FALSE 0.178 89.000 0.000 NA   NA
 7690434 7690435 HELPY_0157 HELPY_0158 recA eno TRUE 0.941 10.000 0.033 1.000 N NA
 7690435 7690436 HELPY_0158 HELPY_0159 eno   TRUE 0.928 -7.000 0.080 NA   NA
 7690436 7690437 HELPY_0159 HELPY_0160     TRUE 0.975 11.000 0.788 NA   NA
 7690437 7690438 HELPY_0160 HELPY_0161   aroK TRUE 0.927 5.000 0.127 NA   NA
 7690438 7690439 HELPY_0161 HELPY_0162 aroK   TRUE 0.847 22.000 0.078 NA   NA
 7690442 7690443 HELPY_0165 HELPY_0166   hemB TRUE 0.854 1.000 0.010 NA   NA
 7690443 7690444 HELPY_0166 HELPY_0168 hemB   TRUE 0.736 34.000 0.028 1.000 N NA
 7690444 7690445 HELPY_0168 HELPY_0169   ompR TRUE 0.937 26.000 0.448 1.000 Y NA
 7690445 7690446 HELPY_0169 HELPY_0170 ompR   FALSE 0.039 243.000 0.000 NA   NA
 7690446 7690447 HELPY_0170 HELPY_0171     TRUE 0.944 -9.000 0.233 NA   NA
 7690447 7690448 HELPY_0171 HELPY_0172     TRUE 0.661 34.000 0.018 1.000   NA
 7690448 7690449 HELPY_0172 HELPY_0173     TRUE 0.908 3.000 0.068 NA   NA
 7690449 7690450 HELPY_0173 HELPY_0174   prfB FALSE 0.300 70.000 0.011 NA   NA
 7690450 7690451 HELPY_0174 HELPY_0175 prfB moeA TRUE 0.445 61.000 0.007 1.000 N NA
 7690451 7690452 HELPY_0175 HELPY_0176 moeA fliR TRUE 0.954 10.000 0.069 1.000 N NA
 7690452 7690453 HELPY_0176 HELPY_0177 fliR   TRUE 0.969 -6.000 0.069 0.061   NA
 7690454 7690455 HELPY_0179 HELPY_0180 ppiC fba TRUE 0.936 17.000 0.121 1.000 N NA
 7690455 7690456 HELPY_0180 HELPY_0181 fba efp TRUE 0.827 22.000 0.012 1.000 N NA
 7690457 7690458 HELPY_0182 HELPY_0183 neuB   TRUE 0.909 4.000 0.018 1.000 N NA
 7690458 7690459 HELPY_0183 HELPY_0184   lnt TRUE 0.943 -3.000 0.020 1.000 N NA
 7690460 7690461 HELPY_0185 HELPY_0186   lysS TRUE 0.918 10.000 0.023 1.000   NA
 7690461 7690462 HELPY_0186 HELPY_0187 lysS glyA TRUE 0.949 0.000 0.044 1.000 N NA
 7690462 7690463 HELPY_0187 HELPY_0188 glyA   TRUE 0.957 11.000 0.271 NA   NA
 7690463 7690464 HELPY_0188 HELPY_0189     TRUE 0.893 22.000 0.258 NA   NA
 7690465 7690466 HELPY_0190 HELPY_0191     FALSE 0.105 124.000 0.000 NA   NA
 7690468 7690469 HELPY_0193 HELPY_0194   frdB TRUE 0.842 22.000 0.019 1.000 N NA
 7690469 7690470 HELPY_0194 HELPY_0195 frdB frdA TRUE 0.980 -7.000 0.025 0.003 Y NA
 7690470 7690471 HELPY_0195 HELPY_0196 frdA frdC TRUE 0.991 10.000 0.276 0.003 Y NA
 7690472 7690473 HELPY_0197 HELPY_0198 tpi   TRUE 0.975 10.000 0.071 0.039 N NA
 7690473 7690474 HELPY_0198 HELPY_0199   lpxD TRUE 0.930 10.000 0.018 1.000 N NA
 7690474 7690475 HELPY_0199 HELPY_0200 lpxD metK TRUE 0.456 65.000 0.011 1.000 N NA
 7690475 7690476 HELPY_0200 HELPY_0201 metK ndk FALSE 0.439 67.000 0.010 1.000 N NA
 7690476 7690477 HELPY_0201 HELPY_0202 ndk   TRUE 0.720 26.000 0.033 NA   NA
 7690477 7690478 HELPY_0202 HELPY_0203   rpmF TRUE 0.864 16.000 0.032 NA   NA
 7690478 7690479 HELPY_0203 HELPY_0204 rpmF plsX TRUE 0.701 64.000 0.418 1.000   NA
 7690479 7690480 HELPY_0204 HELPY_0205 plsX fabH TRUE 0.945 25.000 0.058 0.010 Y NA
 7690480 7690481 HELPY_0205 HELPY_0206 fabH   TRUE 0.888 21.000 0.154 NA   NA
 7690482 7690483 HELPY_0207 HELPY_0208     TRUE 0.763 16.000 0.000 NA   NA
 7690483 7690484 HELPY_0208 HELPY_0209     FALSE 0.348 46.000 0.000 NA   NA
 7690487 7690488 HELPY_0212 HELPY_0213 hofA htpG FALSE 0.232 103.000 0.010 1.000   NA
 7690489 7690490 HELPY_0214 HELPY_0215 hcpA dapE FALSE 0.040 459.000 0.013 1.000   NA
 7690490 7690491 HELPY_0215 HELPY_0216 dapE gidA TRUE 0.921 11.000 0.010 1.000 N NA
 7690492 7690493 HELPY_0217 HELPY_0218   cdsA TRUE 0.962 13.000 0.031 0.085 N NA
 7690493 7690494 HELPY_0218 HELPY_0219 cdsA dxr TRUE 0.931 1.000 0.002 1.000 Y NA
 7690494 7690495 HELPY_0219 HELPY_0220 dxr   FALSE 0.321 51.000 0.000 NA   NA
 7690495 7690496 HELPY_0220 HELPY_0221     TRUE 0.674 -85.000 0.000 NA   NA
 7690498 7690499 HELPY_0223 HELPY_0224   nifS FALSE 0.223 171.000 0.103 1.000   NA
 7690499 7690500 HELPY_0224 HELPY_0225 nifS nifU TRUE 0.883 22.000 0.056 1.000 N NA
 7690500 7690501 HELPY_0225 HELPY_0226 nifU   FALSE 0.075 160.000 0.000 NA   NA
 7690501 7690502 HELPY_0226 HELPY_0227     TRUE 0.854 -3.000 0.000 NA   NA
 7690502 7690503 HELPY_0227 HELPY_0228   radA FALSE 0.121 112.000 0.000 NA   NA
 7690503 7690504 HELPY_0228 HELPY_0229 radA msr FALSE 0.309 114.000 0.008 1.000 Y NA
 7690505 7690506 HELPY_0230 HELPY_0231   hopM FALSE 0.047 213.000 0.000 NA   NA
 7690508 7690509 HELPY_tRNA30 HELPY_0233   hopA FALSE 0.096 129.000 0.000 NA   NA
 7690509 7690510 HELPY_0233 HELPY_0234 hopA kdsB FALSE 0.086 194.000 0.016 NA   NA
 7690511 7690512 HELPY_0235 HELPY_0236     TRUE 0.933 16.000 0.258 NA   NA
 7690512 7690513 HELPY_0236 HELPY_0237   gsp TRUE 0.920 24.000 0.763 NA   NA
 7690513 7690514 HELPY_0237 HELPY_0239 gsp   TRUE 0.954 0.000 0.211 NA   NA
 7690515 7690516 HELPY_0240 HELPY_0241 hcpE   TRUE 0.471 94.000 0.167 1.000   NA
 7690516 7690517 HELPY_0241 HELPY_0242   hemC TRUE 0.900 0.000 0.008 1.000   NA
 7690517 7690518 HELPY_0242 HELPY_0243 hemC proS TRUE 0.923 11.000 0.010 1.000 N NA
 7690518 7690519 HELPY_0243 HELPY_0244 proS hemA TRUE 0.959 4.000 0.040 0.054 N NA
 7690519 7690520 HELPY_0244 HELPY_0245 hemA ispB TRUE 0.967 0.000 0.051 1.000 Y NA
 7690520 7690521 HELPY_0245 HELPY_0246 ispB   TRUE 0.888 10.000 0.017 NA   NA
 7690521 7690522 HELPY_0246 HELPY_0247     TRUE 0.954 -7.000 0.286 NA   NA
 7690522 7690523 HELPY_0247 HELPY_0248   napA TRUE 0.880 21.000 0.121 NA   NA
 7690523 7690524 HELPY_0248 HELPY_0249 napA   FALSE 0.086 206.000 0.000 1.000 N NA
 7690524 7690525 HELPY_0249 HELPY_0250     TRUE 0.969 -3.000 0.406 NA   NA
 7690525 7690526 HELPY_0250 HELPY_0251   flgI TRUE 0.974 -3.000 0.569 NA   NA
 7690527 7690528 HELPY_0252 HELPY_0253 deaD   TRUE 0.918 21.000 0.119 1.000 N NA
 7690528 7690529 HELPY_0253 HELPY_0254     TRUE 0.927 7.000 0.119 NA   NA
 7690530 7690531 HELPY_0255 HELPY_0256     TRUE 0.830 10.000 0.000 NA   NA
 7690531 7690532 HELPY_0256 HELPY_0257     TRUE 0.605 24.000 0.000 NA   NA
 7690532 7690533 HELPY_0257 HELPY_tRNA29     FALSE 0.143 102.000 0.000 NA   NA
 7690534 7690535 HELPY_0258 HELPY_0259 hopF hopG TRUE 0.963 13.000 0.500 NA   NA
 7690535 7690536 HELPY_0259 HELPY_0260 hopG purA FALSE 0.192 99.000 0.009 NA   NA
 7690536 7690537 HELPY_0260 HELPY_0261 purA   TRUE 0.886 -3.000 0.009 NA   NA
 7690537 7690538 HELPY_0261 HELPY_0262     TRUE 0.932 -7.000 0.093 NA   NA
 7690538 7690539 HELPY_0262 HELPY_0263     TRUE 0.905 0.000 0.010 1.000   NA
 7690539 7690540 HELPY_0263 HELPY_0264   xseA TRUE 0.914 13.000 0.011 1.000 N NA
 7690541 7690542 HELPY_0265 HELPY_0266     TRUE 0.970 -7.000 0.727 NA   NA
 7690543 7690544 HELPY_0267 HELPY_0268     TRUE 0.788 5.000 0.000 NA   NA
 7690544 7690545 HELPY_0268 HELPY_0269   hpy99VIIIM TRUE 0.854 -3.000 0.000 NA   NA
 7690545 7690546 HELPY_0269 HELPY_0270 hpy99VIIIM clpB TRUE 0.581 73.000 0.216 1.000   NA
 7690546 7690547 HELPY_0270 HELPY_0271 clpB ccdA TRUE 0.686 54.000 0.216 1.000   NA
 7690547 7690548 HELPY_0271 HELPY_0272 ccdA pyrC TRUE 0.926 10.000 0.014 1.000 N NA
 7690548 7690549 HELPY_0272 HELPY_0273 pyrC   TRUE 0.929 -12.000 0.011 1.000 Y NA
 7690549 7690550 HELPY_0273 HELPY_0274     TRUE 0.506 60.000 0.066 NA   NA
 7690550 7690551 HELPY_0274 HELPY_0275     TRUE 0.909 10.000 0.033 NA   NA
 7690551 7690552 HELPY_0275 HELPY_0276     TRUE 0.582 40.000 0.029 NA   NA
 7690552 7690553 HELPY_0276 HELPY_0277     TRUE 0.962 -7.000 0.462 NA   NA
 7690553 7690554 HELPY_0277 HELPY_0278     TRUE 0.972 -10.000 1.000 NA   NA
 7690554 7690555 HELPY_0278 HELPY_0279     TRUE 0.963 -3.000 0.276 NA   NA
 7690555 7690556 HELPY_0279 HELPY_0280     TRUE 0.894 17.000 0.087 NA   NA
 7690556 7690557 HELPY_0280 HELPY_0281     TRUE 0.625 37.000 0.033 NA   NA
 7690557 7690558 HELPY_0281 HELPY_0282     TRUE 0.783 45.000 0.400 1.000   NA
 7690558 7690559 HELPY_0282 HELPY_0283     TRUE 0.588 57.000 0.139 NA   NA
 7690559 7690560 HELPY_0283 HELPY_0284   gppA TRUE 0.975 10.000 0.806 NA   NA
 7690560 7690561 HELPY_0284 HELPY_0285 gppA waaC TRUE 0.979 -3.000 0.429 1.000 N NA
 7690561 7690562 HELPY_0285 HELPY_0286 waaC waaM TRUE 0.982 -3.000 0.231 1.000 Y NA
 7690564 7690565 HELPY_0288 HELPY_0289   aroB TRUE 0.904 5.000 0.031 1.000   NA
 7690565 7690566 HELPY_0289 HELPY_0290 aroB   TRUE 0.934 -9.000 0.041 1.000 N NA
 7690566 7690567 HELPY_0290 HELPY_0291     TRUE 0.960 -3.000 0.063 1.000 N NA
 7690567 7690568 HELPY_0291 HELPY_0292   ftsH1 TRUE 0.932 -13.000 0.067 1.000 N NA
 7690568 7690569 HELPY_0292 HELPY_0293 ftsH1   TRUE 0.938 3.000 0.237 NA   NA
 7690569 7690570 HELPY_0293 HELPY_0294     TRUE 0.932 13.000 0.100 NA   NA
 7690570 7690571 HELPY_0294 HELPY_0295     TRUE 0.544 68.000 0.172 NA   NA
 7690571 7690572 HELPY_0295 HELPY_0296   lysA TRUE 0.466 48.000 0.008 1.000   NA
 7690572 7690573 HELPY_0296 HELPY_0297 lysA   TRUE 0.929 5.000 0.009 1.000 Y NA
 7690573 7690574 HELPY_0297 HELPY_0298     TRUE 0.914 13.000 0.053 NA   NA
 7690574 7690575 HELPY_0298 HELPY_0299   pabB TRUE 0.878 1.000 0.021 NA   NA
 7690575 7690576 HELPY_0299 HELPY_0300 pabB amiE FALSE 0.120 195.000 0.024 1.000   NA
 7690578 7690579 HELPY_0302 HELPY_0303 rplU rpmA TRUE 0.990 15.000 0.667 0.036 Y NA
 7690579 7690580 HELPY_0303 HELPY_0304 rpmA dppA FALSE 0.211 117.000 0.006 1.000 N NA
 7690580 7690581 HELPY_0304 HELPY_0305 dppA dppB TRUE 0.981 11.000 0.041 0.028 Y NA
 7690581 7690582 HELPY_0305 HELPY_0306 dppB dppC TRUE 0.994 0.000 0.779 0.028 Y NA
 7690582 7690583 HELPY_0306 HELPY_0308 dppC dppD TRUE 0.967 12.000 0.060 1.000 Y NA
 7690583 7690584 HELPY_0308 HELPY_0309 dppD dppF TRUE 0.983 -3.000 0.087 0.002   NA
 7690584 7690585 HELPY_0309 HELPY_0310 dppF   TRUE 0.808 19.000 0.008 1.000   NA
 7690585 7690586 HELPY_0310 HELPY_0311     TRUE 0.511 42.000 0.007 1.000   NA
 7690586 7690587 HELPY_0311 HELPY_0312     FALSE 0.034 266.000 0.000 NA   NA
 7690587 7690588 HELPY_0312 HELPY_0313   hemL TRUE 0.946 10.000 0.154 NA   NA
 7690588 7690589 HELPY_0313 HELPY_0314 hemL   TRUE 0.970 -3.000 0.462 NA   NA
 7690589 7690590 HELPY_0314 HELPY_0315     TRUE 0.939 16.000 0.308 NA   NA
 7690590 7690591 HELPY_0315 HELPY_0316     TRUE 0.646 84.000 0.800 NA   NA
 7690591 7690592 HELPY_0316 HELPY_0317     TRUE 0.961 13.000 0.276 1.000   NA
 7690592 7690593 HELPY_0317 HELPY_0318     TRUE 0.763 46.000 0.517 NA   NA
 7690593 7690594 HELPY_0318 HELPY_0319     TRUE 0.976 0.000 0.788 NA   NA
 7690595 7690596 HELPY_0320 HELPY_0321     FALSE 0.026 510.000 0.000 NA N NA
 7690596 7690597 HELPY_0321 HELPY_0322   argS FALSE 0.226 111.000 0.004 1.000 N NA
 7690597 7690598 HELPY_0322 HELPY_0323 argS tatA TRUE 0.909 3.000 0.020 1.000 N NA
 7690598 7690599 HELPY_0323 HELPY_0324 tatA gmk FALSE 0.408 72.000 0.011 1.000 N NA
 7690599 7690600 HELPY_0324 HELPY_0325 gmk   TRUE 0.841 -7.000 0.002 NA   NA
 7690603 7690604 HELPY_0328 HELPY_0329 flgH   TRUE 0.727 18.000 0.000 NA   NA
 7690604 7690605 HELPY_0329 HELPY_0330     TRUE 0.802 -9.000 0.000 NA   NA
 7690605 7690606 HELPY_0330 HELPY_0331     TRUE 0.854 -3.000 0.000 NA   NA
 7690607 7690608 HELPY_0332 HELPY_0333 lpxK nadE TRUE 0.944 -3.000 0.024 1.000 N NA
 7690609 7690610 HELPY_tRNA2 HELPY_0334   ilvC FALSE 0.173 91.000 0.000 NA   NA
 7690610 7690611 HELPY_0334 HELPY_0335 ilvC minD TRUE 0.790 24.000 0.012 1.000 N NA
 7690611 7690612 HELPY_0335 HELPY_0336 minD minE TRUE 0.985 -3.000 0.618 NA Y NA
 7690612 7690613 HELPY_0336 HELPY_0337 minE dprA TRUE 0.873 7.000 0.010 NA N NA
 7690613 7690614 HELPY_0337 HELPY_0338 dprA   TRUE 0.964 -3.000 0.026 1.000 Y NA
 7690614 7690615 HELPY_0338 HELPY_0339   hcpH FALSE 0.089 194.000 0.005 1.000   NA
 7690615 7690616 HELPY_0339 HELPY_0340 hcpH   FALSE 0.268 186.000 0.500 NA   NA
 7690616 7690617 HELPY_0340 HELPY_0341     TRUE 0.964 -16.000 1.000 NA   NA
 7690617 7690618 HELPY_0341 HELPY_0342     FALSE 0.288 57.000 0.000 NA   NA
 7690618 7690619 HELPY_0342 HELPY_0343     TRUE 0.782 -12.000 0.000 NA   NA
 7690619 7690620 HELPY_0343 HELPY_0344     TRUE 0.854 -3.000 0.000 NA   NA
 7690620 7690621 HELPY_0344 HELPY_0345     FALSE 0.029 309.000 0.000 NA   NA
 7690621 7690622 HELPY_0345 HELPY_0346     TRUE 0.889 0.000 0.014 NA   NA
 7690622 7690623 HELPY_0346 HELPY_0347     TRUE 0.792 -10.000 0.000 NA   NA
 7690623 7690624 HELPY_0347 HELPY_0348     FALSE 0.035 264.000 0.000 NA   NA
 7690624 7690625 HELPY_0348 HELPY_0349     TRUE 0.689 -46.000 0.000 NA   NA
 7690626 7690627 HELPY_0350 HELPY_0351 rluD recJ TRUE 0.924 0.000 0.010 1.000 N NA
 7690627 7690628 HELPY_0351 HELPY_0352 recJ pyrG TRUE 0.928 9.000 0.026 1.000 N NA
 7690629 7690630 HELPY_0353 HELPY_0354   fliF TRUE 0.599 44.000 0.032 1.000   NA
 7690630 7690631 HELPY_0354 HELPY_0355 fliF fliG TRUE 0.991 13.000 0.477 0.013 Y NA
 7690631 7690632 HELPY_0355 HELPY_0356 fliG fliH TRUE 0.974 -7.000 0.308 NA Y NA
 7690632 7690633 HELPY_0356 HELPY_0357 fliH dxs TRUE 0.946 -3.000 0.052 NA N NA
 7690633 7690634 HELPY_0357 HELPY_0358 dxs lepA TRUE 0.927 -3.000 0.008 1.000 N NA
 7690634 7690635 HELPY_0358 HELPY_0359 lepA   TRUE 0.816 15.000 0.007 NA   NA
 7690635 7690636 HELPY_0359 HELPY_0360     TRUE 0.939 3.000 0.250 NA   NA
 7690637 7690638 HELPY_0361 HELPY_0362 flgG   TRUE 0.586 54.000 0.033 1.000 N NA
 7690638 7690639 HELPY_0362 HELPY_0363   ftsK FALSE 0.295 163.000 0.024 0.058 N NA
 7690639 7690640 HELPY_0363 HELPY_0364 ftsK   TRUE 0.980 -3.000 0.096 0.063 N NA
 7690640 7690641 HELPY_0364 HELPY_0365   tkt TRUE 0.971 -3.000 0.169 1.000 N NA
 7690641 7690642 HELPY_0365 HELPY_0366 tkt ribF TRUE 0.567 47.000 0.013 1.000 N NA
 7690642 7690643 HELPY_0366 HELPY_0367 ribF tlyA TRUE 0.865 -34.000 0.018 1.000 N NA
 7690643 7690644 HELPY_0367 HELPY_0368 tlyA   TRUE 0.891 0.000 0.016 NA   NA
 7690645 7690646 HELPY_0369 HELPY_0370 pyrB hofB FALSE 0.049 254.000 0.000 1.000   NA
 7690646 7690647 HELPY_0370 HELPY_0371 hofB   FALSE 0.316 91.000 0.020 1.000   NA
 7690647 7690648 HELPY_0371 HELPY_0372     TRUE 0.893 -6.000 0.020 NA   NA
 7690648 7690649 HELPY_0372 HELPY_0373     TRUE 0.911 4.000 0.072 NA   NA
 7690649 7690650 HELPY_0373 HELPY_0374   nixA FALSE 0.243 123.000 0.018 1.000 N NA
 7690653 7690654 HELPY_0378 HELPY_0379 copP copA TRUE 0.994 1.000 0.875 0.002 Y NA
 7690654 7690655 HELPY_0379 HELPY_0380 copA pssA TRUE 0.936 -3.000 0.013 1.000 N NA
 7690655 7690656 HELPY_0380 HELPY_0381 pssA ftsH2 FALSE 0.139 247.000 0.007 0.081 N NA
 7690656 7690657 HELPY_0381 HELPY_0382 ftsH2 prmA TRUE 0.934 9.000 0.032 1.000 N NA
 7690657 7690658 HELPY_0382 HELPY_0383 prmA cheY TRUE 0.929 1.000 0.029 1.000 N NA
 7690660 7690661 HELPY_tRNA28 HELPY_0385     FALSE 0.375 43.000 0.000 NA   NA
 7690661 7690662 HELPY_0385 HELPY_0386     TRUE 0.945 3.000 0.304 NA   NA
 7690662 7690663 HELPY_0386 HELPY_0387   gidB TRUE 0.884 -6.000 0.015 NA   NA
 7690663 7690664 HELPY_0387 HELPY_0388 gidB queA TRUE 0.938 -3.000 0.015 1.000 N NA
 7690664 7690665 HELPY_0388 HELPY_0389 queA tatC TRUE 0.917 1.000 0.036 NA N NA
 7690665 7690666 HELPY_0389 HELPY_0390 tatC tatB TRUE 0.979 -7.000 0.535 NA Y NA
 7690666 7690667 HELPY_0390 HELPY_0391 tatB ruvB FALSE 0.424 67.000 0.008 1.000 N NA
 7690667 7690668 HELPY_0391 HELPY_0392 ruvB panB TRUE 0.927 1.000 0.027 1.000 N NA
 7690669 7690670 HELPY_0393 HELPY_0394     TRUE 0.967 -10.000 0.778 NA   NA
 7690670 7690671 HELPY_0394 HELPY_0395     TRUE 0.978 12.000 1.000 NA   NA
 7690671 7690672 HELPY_0395 HELPY_0396     TRUE 0.956 10.000 0.273 NA   NA
 7690672 7690673 HELPY_0396 HELPY_0397   minC TRUE 0.898 3.000 0.030 NA N NA
 7690673 7690674 HELPY_0397 HELPY_0398 minC lpxC TRUE 0.946 -3.000 0.027 1.000 N NA
 7690674 7690675 HELPY_0398 HELPY_0399 lpxC   TRUE 0.802 22.000 0.035 NA   NA
 7690675 7690676 HELPY_0399 HELPY_0400   thrB TRUE 0.465 54.000 0.032 NA   NA
 7690676 7690677 HELPY_0400 HELPY_0401 thrB   TRUE 0.902 -13.000 0.044 NA N NA
 7690677 7690678 HELPY_0401 HELPY_0402   infB TRUE 0.964 -3.000 0.171 NA N NA
 7690678 7690679 HELPY_0402 HELPY_0403 infB rbfA TRUE 0.985 0.000 0.530 1.000 Y NA
 7690679 7690680 HELPY_0403 HELPY_0404 rbfA   TRUE 0.900 -7.000 0.033 NA   NA
 7690682 7690683 HELPY_0406 HELPY_0407     FALSE 0.035 341.000 0.000 1.000   NA
 7690683 7690684 HELPY_0407 HELPY_0409     FALSE 0.082 146.000 0.000 NA   NA
 7690685 7690686 HELPY_0410 HELPY_0411     FALSE 0.025 354.000 0.000 NA   NA
 7690686 7690687 HELPY_0411 HELPY_0412   flhA TRUE 0.805 31.000 0.106 1.000   NA
 7690688 7690689 HELPY_0413 HELPY_0414 rpsO   TRUE 0.623 31.000 0.007 NA N NA
 7690689 7690690 HELPY_0414 HELPY_0415   aroQ FALSE 0.169 131.000 0.014 NA N NA
 7690690 7690691 HELPY_0415 HELPY_0416 aroQ pepQ TRUE 0.970 14.000 0.168 1.000 Y NA
 7690691 7690692 HELPY_0416 HELPY_0417 pepQ folK TRUE 0.950 -3.000 0.033 1.000 N NA
 7690692 7690693 HELPY_0417 HELPY_0418 folK flhF TRUE 0.943 -6.000 0.035 1.000 N NA
 7690693 7690694 HELPY_0418 HELPY_0419 flhF   TRUE 0.978 -3.000 0.382 1.000 N NA
 7690694 7690695 HELPY_0419 HELPY_0420     TRUE 0.931 5.000 0.159 NA   NA
 7690695 7690696 HELPY_0420 HELPY_0421   fliA TRUE 0.895 -22.000 0.112 NA   NA
 7690696 7690697 HELPY_0421 HELPY_0422 fliA fliM TRUE 0.958 -7.000 0.118 1.000 N NA
 7690697 7690698 HELPY_0422 HELPY_0423 fliM fliY TRUE 0.985 4.000 0.142 0.004 Y NA
 7690698 7690699 HELPY_0423 HELPY_0424 fliY   TRUE 0.834 29.000 0.170 NA N NA
 7690699 7690700 HELPY_0424 HELPY_0425     TRUE 0.969 -3.000 0.421 NA   NA
 7690701 7690702 HELPY_0426 HELPY_0427 fur   FALSE 0.158 160.000 0.009 1.000 N NA
 7690702 7690703 HELPY_0427 HELPY_0428     TRUE 0.973 -3.000 0.013 0.006 N NA
 7690703 7690704 HELPY_0428 HELPY_0429   dnaJ TRUE 0.967 10.000 0.211 1.000 N NA
 7690706 7690707 HELPY_0431 HELPY_0432     TRUE 0.597 40.000 0.033 NA   NA
 7690707 7690708 HELPY_0432 HELPY_0433     TRUE 0.614 54.000 0.160 NA   NA
 7690708 7690709 HELPY_0433 HELPY_0434   ispDF TRUE 0.854 22.000 0.027 1.000 N NA
 7690709 7690710 HELPY_0434 HELPY_0435 ispDF   TRUE 0.824 22.000 0.011 1.000 N NA
 7690710 7690711 HELPY_0435 HELPY_0436     TRUE 0.769 45.000 0.206 1.000 N NA
 7690711 7690712 HELPY_0436 HELPY_0437   pgsA FALSE 0.164 214.000 0.003 0.056 N NA
 7690712 7690713 HELPY_0437 HELPY_0438 pgsA   TRUE 0.888 -3.000 0.009 NA   NA
 7690713 7690714 HELPY_0438 HELPY_0439     TRUE 0.944 10.000 0.132 NA   NA
 7690714 7690715 HELPY_0439 HELPY_0440   dapA TRUE 0.974 -3.000 0.238 1.000 N NA
 7690715 7690716 HELPY_0440 HELPY_0441 dapA   TRUE 0.948 15.000 0.217 1.000   NA
 7690716 7690717 HELPY_0441 HELPY_0442   pyrD TRUE 0.946 -3.000 0.048 1.000   NA
 7690717 7690718 HELPY_0442 HELPY_0443 pyrD ppk TRUE 0.672 37.000 0.013 1.000 N NA
 7690718 7690719 HELPY_0443 HELPY_tRNA27 ppk   FALSE 0.161 94.000 0.000 NA   NA
 7690719 7690720 HELPY_tRNA27 HELPY_0444   hsdS1 FALSE 0.034 266.000 0.000 NA   NA
 7690720 7690721 HELPY_0444 HELPY_0445 hsdS1 hsdM1 TRUE 0.959 -7.000 0.000 0.061 Y NA
 7690721 7690722 HELPY_0445 HELPY_0446 hsdM1   TRUE 0.817 -7.000 0.000 NA   NA
 7690722 7690723 HELPY_0446 HELPY_0447     FALSE 0.040 236.000 0.000 NA   NA
 7690723 7690724 HELPY_0447 HELPY_0448     FALSE 0.336 48.000 0.000 NA   NA
 7690724 7690725 HELPY_0448 HELPY_0449     TRUE 0.697 26.000 0.025 NA   NA
 7690725 7690726 HELPY_0449 HELPY_0450     TRUE 0.913 10.000 0.040 NA   NA
 7690726 7690727 HELPY_0450 HELPY_0451     TRUE 0.955 2.000 0.500 NA   NA
 7690727 7690728 HELPY_0451 HELPY_0452     TRUE 0.958 12.000 0.294 NA   NA
 7690728 7690729 HELPY_0452 HELPY_0453   pepF TRUE 0.906 -15.000 0.115 NA   NA
 7690729 7690730 HELPY_0453 HELPY_0455 pepF   FALSE 0.430 79.000 0.028 1.000 N NA
 7690730 7690731 HELPY_0455 HELPY_0456   horE FALSE 0.026 329.000 0.000 NA   NA
 7690732 7690733 HELPY_0457 HELPY_0458 modA modB TRUE 0.985 22.000 0.660 0.002 Y NA
 7690733 7690734 HELPY_0458 HELPY_0459 modB modC TRUE 0.983 -3.000 0.286 1.000 Y NA
 7690736 7690737 HELPY_0461 HELPY_0462 hopJ hpyAVIIM TRUE 0.974 9.000 0.875 NA   NA
 7690737 7690738 HELPY_0462 HELPY_0463 hpyAVIIM   TRUE 0.941 -34.000 0.273 1.000 N NA
 7690738 7690739 HELPY_0463 HELPY_0464   typA TRUE 0.538 46.000 0.008 1.000 N NA
 7690739 7690740 HELPY_0464 HELPY_0465 typA hpy99XIM TRUE 0.883 4.000 0.003 1.000 N NA
 7690740 7690741 HELPY_0465 HELPY_0466 hpy99XIM   TRUE 0.955 2.000 0.500 NA   NA
 7690743 7690744 HELPY_0469 HELPY_0470 hofC hofD TRUE 0.855 72.000 0.875 0.016   NA
 7690744 7690745 HELPY_0470 HELPY_0471 hofD   FALSE 0.023 399.000 0.000 NA   NA
 7690745 7690746 HELPY_0471 HELPY_0472     FALSE 0.223 72.000 0.000 NA   NA
 7690746 7690747 HELPY_0472 HELPY_0473     FALSE 0.067 169.000 0.000 NA   NA
 7690751 7690752 HELPY_0477 HELPY_0478 katA   FALSE 0.307 145.000 0.333 NA   NA
 7690752 7690753 HELPY_0478 HELPY_0479     TRUE 0.665 85.000 0.889 NA   NA
 7690755 7690756 HELPY_0481 HELPY_0482 cdh flgE FALSE 0.084 209.000 0.000 1.000 N NA
 7690756 7690757 HELPY_0482 HELPY_0483 flgE hypA TRUE 0.579 59.000 0.071 1.000   NA
 7690757 7690758 HELPY_0483 HELPY_0484 hypA   TRUE 0.909 7.000 0.062 NA   NA
 7690758 7690759 HELPY_0484 HELPY_0485   lpxB TRUE 0.887 0.000 0.013 NA   NA
 7690759 7690760 HELPY_0485 HELPY_0486 lpxB greA TRUE 0.702 41.000 0.042 1.000 N NA
 7690760 7690761 HELPY_0486 HELPY_0487 greA dut TRUE 0.913 -10.000 0.019 1.000 N NA
 7690761 7690762 HELPY_0487 HELPY_0488 dut   TRUE 0.903 -3.000 0.017 NA   NA
 7690762 7690763 HELPY_0488 HELPY_0489   pgbB TRUE 0.935 5.000 0.200 NA   NA
 7690763 7690764 HELPY_0489 HELPY_0490 pgbB   TRUE 0.827 5.000 0.008 NA   NA
 7690764 7690765 HELPY_0490 HELPY_0491     TRUE 0.881 0.000 0.011 NA   NA
 7690765 7690766 HELPY_0491 HELPY_0492   gmhB TRUE 0.889 -10.000 0.036 NA   NA
 7690766 7690767 HELPY_0492 HELPY_0493 gmhB rfaD TRUE 0.954 9.000 0.093 1.000 N NA
 7690767 7690768 HELPY_0493 HELPY_0494 rfaD rfaE TRUE 0.976 -3.000 0.096 1.000 Y NA
 7690768 7690769 HELPY_0494 HELPY_0495 rfaE gmhA TRUE 0.960 -7.000 0.142 1.000 N NA
 7690770 7690771 HELPY_0496 HELPY_0497     TRUE 0.830 10.000 0.000 NA   NA
 7690771 7690772 HELPY_0497 HELPY_0498     TRUE 0.691 -43.000 0.000 NA   NA
 7690775 7690776 HELPY_0501 HELPY_0502     TRUE 0.854 -3.000 0.000 NA   NA
 7690776 7690777 HELPY_0502 HELPY_0503     TRUE 0.803 8.000 0.000 NA   NA
 7690779 7690780 HELPY_0505 HELPY_0506     TRUE 0.682 -70.000 0.000 NA   NA
 7690780 7690781 HELPY_0506 HELPY_0507   hsdS2 TRUE 0.817 -7.000 0.000 NA   NA
 7690781 7690782 HELPY_0507 HELPY_0508 hsdS2   TRUE 0.854 -3.000 0.000 NA   NA
 7690782 7690783 HELPY_0508 HELPY_0509     FALSE 0.078 155.000 0.000 NA   NA
 7690783 7690784 HELPY_0509 HELPY_0510   thiM FALSE 0.178 89.000 0.000 NA   NA
 7690784 7690785 HELPY_0510 HELPY_0511 thiM thiD TRUE 0.983 -3.000 0.017 0.003 Y NA
 7690785 7690786 HELPY_0511 HELPY_0512 thiD thiE TRUE 0.985 -7.000 0.063 0.003 Y NA
 7690787 7690788 HELPY_0513 HELPY_0514   dfp TRUE 0.902 0.000 0.024 NA   NA
 7690788 7690789 HELPY_0514 HELPY_0515 dfp flaA1 TRUE 0.912 -3.000 0.009 1.000   NA
 7690789 7690790 HELPY_0515 HELPY_0516 flaA1 ompP1 TRUE 0.904 4.000 0.061 NA   NA
 7690790 7690791 HELPY_0516 HELPY_0517 ompP1   TRUE 0.969 -3.000 0.421 NA   NA
 7690791 7690792 HELPY_0517 HELPY_0518     TRUE 0.894 20.000 0.156 NA   NA
 7690792 7690793 HELPY_0518 HELPY_tRNA26     FALSE 0.021 464.000 0.000 NA   NA
 7690793 7690794 HELPY_tRNA26 HELPY_0519   hup FALSE 0.266 63.000 0.000 NA   NA
 7690794 7690795 HELPY_0519 HELPY_0520 hup   FALSE 0.132 152.000 0.008 1.000   NA
 7690796 7690797 HELPY_0521 HELPY_0522   speE FALSE 0.379 87.000 0.068 NA   NA
 7690797 7690798 HELPY_0522 HELPY_0523 speE coaE TRUE 0.905 2.000 0.016 1.000 N NA
 7690798 7690799 HELPY_0523 HELPY_0524 coaE gatA TRUE 0.445 60.000 0.006 1.000 N NA
 7690799 7690800 HELPY_0524 HELPY_0525 gatA guaB TRUE 0.940 10.000 0.032 1.000 N NA
 7690800 7690801 HELPY_0525 HELPY_0526 guaB atpB FALSE 0.244 122.000 0.018 1.000 N NA
 7690801 7690802 HELPY_0526 HELPY_0528 atpB   FALSE 0.038 322.000 0.000 1.000   NA
 7690803 7690804 HELPY_0529 HELPY_0531   trxR1 FALSE 0.044 357.000 0.000 1.000 N NA
 7690804 7690805 HELPY_0531 HELPY_0532 trxR1 trx1 TRUE 0.909 5.000 0.035 1.000   NA
 7690805 7690806 HELPY_0532 HELPY_0533 trx1   FALSE 0.344 89.000 0.027 1.000   NA
 7690806 7690807 HELPY_0533 HELPY_0534   hom TRUE 0.923 1.000 0.023 1.000 N NA
 7690807 7690808 HELPY_0534 HELPY_0535 hom uvrC TRUE 0.917 11.000 0.008 1.000 N NA
 7690808 7690809 HELPY_0535 HELPY_0536 uvrC   TRUE 0.848 1.000 0.009 NA   NA
 7690809 7690810 HELPY_0536 HELPY_0538     FALSE 0.181 183.000 0.123 NA   NA
 7690810 7690811 HELPY_0538 HELPY_0539     TRUE 0.962 4.000 0.292 1.000 N NA
 7690811 7690812 HELPY_0539 HELPY_0540     TRUE 0.580 60.000 0.156 NA   NA
 7690812 7690813 HELPY_0540 HELPY_0541   motB TRUE 0.966 -3.000 0.320 NA   NA
 7690813 7690814 HELPY_0541 HELPY_0542 motB motA TRUE 0.964 3.000 0.119 1.000 Y NA
 7690814 7690815 HELPY_0542 HELPY_0543 motA moeB TRUE 0.883 16.000 0.010 1.000 N NA
 7690815 7690816 HELPY_0543 HELPY_0544 moeB   TRUE 0.911 1.000 0.028 1.000   NA
 7690817 7690818 HELPY_0545 HELPY_0546     FALSE 0.024 362.000 0.000 NA   NA
 7690818 7690819 HELPY_0546 HELPY_0547     TRUE 0.844 -21.000 0.032 NA   NA
 7690819 7690820 HELPY_0547 HELPY_0548   fliL TRUE 0.877 15.000 0.014 NA N NA
 7690820 7690821 HELPY_0548 HELPY_0549 fliL acpS TRUE 0.933 7.000 0.047 1.000 N NA
 7690821 7690822 HELPY_0549 HELPY_0550 acpS   FALSE 0.047 213.000 0.000 NA   NA
 7690822 7690823 HELPY_0550 HELPY_0551     TRUE 0.817 -7.000 0.000 NA   NA
 7690823 7690824 HELPY_0551 HELPY_0552     TRUE 0.584 25.000 0.000 NA   NA
 7690826 7690827 HELPY_0554 HELPY_0555   ribBA FALSE 0.274 167.000 0.118 1.000 N NA
 7690827 7690828 HELPY_0555 HELPY_0557 ribBA   FALSE 0.415 87.000 0.103 NA   NA
 7690828 7690829 HELPY_0557 HELPY_0558   ribA FALSE 0.311 89.000 0.035 NA   NA
 7690829 7690830 HELPY_0558 HELPY_0559 ribA moaD TRUE 0.496 77.000 0.012 1.000 Y NA
 7690830 7690831 HELPY_0559 HELPY_0560 moaD moaE TRUE 0.982 1.000 0.501 1.000 Y NA
 7690831 7690832 HELPY_0560 HELPY_0561 moaE mog TRUE 0.979 13.000 0.026 0.005 Y NA
 7690832 7690833 HELPY_0561 HELPY_0562 mog moaC TRUE 0.981 10.000 0.028 0.005 Y NA
 7690833 7690834 HELPY_0562 HELPY_0563 moaC hpaA FALSE 0.341 119.000 0.118 1.000   NA
 7690834 7690835 HELPY_0563 HELPY_0564 hpaA horG TRUE 0.842 29.000 0.333 NA   NA
 7690835 7690836 HELPY_0564 HELPY_0565 horG tig FALSE 0.150 112.000 0.008 NA   NA
 7690836 7690837 HELPY_0565 HELPY_0566 tig clpP TRUE 0.966 18.000 0.351 1.000 Y NA
 7690837 7690838 HELPY_0566 HELPY_0567 clpP def TRUE 0.921 5.000 0.030 1.000 N NA
 7690838 7690839 HELPY_0567 HELPY_0568 def   TRUE 0.935 6.000 0.054 1.000 N NA
 7690839 7690840 HELPY_0568 HELPY_0569   cadA TRUE 0.782 25.000 0.014 1.000 N NA
 7690841 7690842 HELPY_0571 HELPY_0572     TRUE 0.971 -13.000 0.500 NA Y NA
 7690842 7690843 HELPY_0572 HELPY_0573     TRUE 0.974 -3.000 0.400 NA N NA
 7690843 7690844 HELPY_0573 HELPY_0574     TRUE 0.950 2.000 0.400 NA   NA
 7690846 7690847 HELPY_0576 HELPY_0577 hofF lolC FALSE 0.044 280.000 0.000 1.000   NA
 7690847 7690848 HELPY_0577 HELPY_0578 lolC secA TRUE 0.975 -10.000 0.201 0.076 N NA
 7690849 7690850 HELPY_0579 HELPY_0581 lolA   FALSE 0.020 494.000 0.000 NA   NA
 7690851 7690852 HELPY_0582 HELPY_0583 hofE   FALSE 0.337 94.000 0.065 NA   NA
 7690852 7690853 HELPY_0583 HELPY_0584     FALSE 0.036 260.000 0.000 NA   NA
 7690853 7690854 HELPY_0584 HELPY_0585   acnB FALSE 0.307 78.000 0.023 NA   NA
 7690855 7690856 HELPY_0586 HELPY_0587   pyrH FALSE 0.157 109.000 0.008 NA   NA
 7690856 7690857 HELPY_0587 HELPY_0588 pyrH rpoZ TRUE 0.670 42.000 0.033 1.000 N NA
 7690857 7690858 HELPY_0588 HELPY_0589 rpoZ spoT TRUE 0.944 -13.000 0.039 1.000 Y NA
 7690858 7690859 HELPY_0589 HELPY_0590 spoT tyrS TRUE 0.905 24.000 0.222 1.000 N NA
 7690859 7690860 HELPY_0590 HELPY_0591 tyrS   TRUE 0.876 17.000 0.029 1.000   NA
 7690860 7690861 HELPY_0591 HELPY_0592   amiA TRUE 0.931 7.000 0.068 1.000   NA
 7690861 7690862 HELPY_0592 HELPY_0593 amiA   TRUE 0.879 19.000 0.084 NA   NA
 7690863 7690864 HELPY_0594 HELPY_0595 flhB mobA TRUE 0.930 -7.000 0.026 1.000 N NA
 7690865 7690866 HELPY_0596 HELPY_0597 moaA   FALSE 0.034 267.000 0.000 NA   NA
 7690866 7690867 HELPY_0597 HELPY_0598     FALSE 0.360 45.000 0.000 NA   NA
 7690867 7690868 HELPY_0598 HELPY_0599     TRUE 0.835 11.000 0.000 NA   NA
 7690868 7690869 HELPY_0599 HELPY_0600     TRUE 0.831 12.000 0.000 NA   NA
 7690869 7690870 HELPY_0600 HELPY_0601     FALSE 0.281 59.000 0.000 NA   NA
 7690871 7690872 HELPY_0602 HELPY_0603     TRUE 0.846 7.000 0.011 NA   NA
 7690873 7690874 HELPY_0604 HELPY_0605     TRUE 0.895 -22.000 0.059 1.000   NA
 7690875 7690876 HELPY_0606 HELPY_0607     TRUE 0.530 63.000 0.098 NA   NA
 7690876 7690877 HELPY_0607 HELPY_0608     FALSE 0.209 126.000 0.048 NA   NA
 7690877 7690878 HELPY_0608 HELPY_0609     TRUE 0.785 4.000 0.000 NA   NA
 7690878 7690879 HELPY_0609 HELPY_0610     TRUE 0.559 26.000 0.000 NA   NA
 7690879 7690880 HELPY_0610 HELPY_0611     FALSE 0.419 54.000 0.018 NA   NA
 7690880 7690881 HELPY_0611 HELPY_0612   fliS TRUE 0.911 -13.000 0.101 NA   NA
 7690881 7690882 HELPY_0612 HELPY_0613 fliS fliD TRUE 0.954 41.000 0.608 0.003 Y NA
 7690882 7690883 HELPY_0613 HELPY_0614 fliD flaG TRUE 0.941 17.000 0.092 NA Y NA
 7690883 7690884 HELPY_0614 HELPY_0615 flaG   FALSE 0.358 93.000 0.043 NA N NA
 7690884 7690885 HELPY_0615 HELPY_0616     TRUE 0.960 -7.000 0.045 1.000 Y NA
 7690885 7690886 HELPY_0616 HELPY_0617     TRUE 0.964 -13.000 0.431 1.000 N NA
 7690886 7690887 HELPY_0617 HELPY_0618     TRUE 0.944 -3.000 0.044 1.000   NA
 7690887 7690888 HELPY_0618 HELPY_0619     TRUE 0.928 11.000 0.060 NA   NA
 7690888 7690889 HELPY_0619 HELPY_0620   rluD2 TRUE 0.878 2.000 0.031 NA   NA
 7690890 7690891 HELPY_0621 HELPY_0622     TRUE 0.659 -205.000 0.000 NA   NA
 7690891 7690892 HELPY_0622 HELPY_0623     TRUE 0.559 26.000 0.000 NA   NA
 7690892 7690893 HELPY_0623 HELPY_0624   rodA TRUE 0.629 23.000 0.000 NA   NA
 7690893 7690894 HELPY_0624 HELPY_tRNA3 rodA   TRUE 0.698 -38.000 0.000 NA   NA
 7690895 7690896 HELPY_0625 HELPY_0626 prs   TRUE 0.621 65.000 0.030 1.000 Y NA
 7690896 7690897 HELPY_0626 HELPY_0627   murF TRUE 0.952 10.000 0.061 1.000 N NA
 7690897 7690898 HELPY_0627 HELPY_0628 murF   TRUE 0.918 -13.000 0.129 NA   NA
 7690898 7690899 HELPY_0628 HELPY_0629   ddlA TRUE 0.906 1.000 0.046 NA   NA
 7690899 7690900 HELPY_0629 HELPY_0630 ddlA pgpA FALSE 0.436 72.000 0.018 1.000 N NA
 7690901 7690902 HELPY_0631 HELPY_0632     TRUE 0.918 9.000 0.032 1.000   NA
 7690902 7690903 HELPY_0632 HELPY_0633     TRUE 0.885 2.000 0.017 1.000   NA
 7690903 7690904 HELPY_0633 HELPY_0634     FALSE 0.132 108.000 0.000 NA   NA
 7690904 7690905 HELPY_0634 HELPY_0635     FALSE 0.190 83.000 0.000 NA   NA
 7690905 7690906 HELPY_0635 HELPY_0636     FALSE 0.161 94.000 0.000 NA   NA
 7690906 7690907 HELPY_0636 HELPY_0637     TRUE 0.494 105.000 0.545 NA   NA
 7690907 7690908 HELPY_0637 HELPY_0638     TRUE 0.960 9.000 0.455 NA   NA
 7690908 7690909 HELPY_0638 HELPY_0639   tilS TRUE 0.509 36.000 0.004 NA   NA
 7690909 7690910 HELPY_0639 HELPY_0640 tilS   TRUE 0.507 93.000 0.005 0.007 N NA
 7690910 7690911 HELPY_0640 HELPY_0641     TRUE 0.889 -3.000 0.009 NA   NA
 7690911 7690912 HELPY_0641 HELPY_0642   hopP FALSE 0.045 220.000 0.000 NA   NA
 7690915 7690916 HELPY_0645 HELPY_0646     FALSE 0.063 181.000 0.000 NA   NA
 7690916 7690917 HELPY_0646 HELPY_0647     TRUE 0.851 31.000 0.462 NA   NA
 7690918 7690919 HELPY_0648 HELPY_0649   dnaX FALSE 0.366 69.000 0.011 1.000   NA
 7690919 7690920 HELPY_0649 HELPY_0650 dnaX   TRUE 0.963 -3.000 0.012 0.021   NA
 7690920 7690921 HELPY_0650 HELPY_0651     TRUE 0.923 13.000 0.039 1.000   NA
 7690921 7690922 HELPY_0651 HELPY_0652   rpoN TRUE 0.913 3.000 0.044 1.000   NA
 7690923 7690924 HELPY_0653 HELPY_0654     TRUE 0.854 -3.000 0.000 NA   NA
 7690924 7690925 HELPY_0654 HELPY_0655     TRUE 0.839 0.000 0.000 NA   NA
 7690925 7690926 HELPY_0655 HELPY_0656   homA FALSE 0.087 190.000 0.015 NA   NA
 7690926 7690927 HELPY_0656 HELPY_0657 homA   FALSE 0.043 225.000 0.000 NA   NA
 7690927 7690928 HELPY_0657 HELPY_0658     FALSE 0.070 203.000 0.010 NA   NA
 7690928 7690929 HELPY_0658 HELPY_0659     TRUE 0.812 21.000 0.031 NA   NA
 7690929 7690930 HELPY_0659 HELPY_0660   hopE FALSE 0.080 178.000 0.008 NA   NA
 7690931 7690932 HELPY_0661 HELPY_0662 uvrA   TRUE 0.506 31.000 0.000 NA   NA
 7690933 7690934 HELPY_0663 HELPY_0664     TRUE 0.464 36.000 0.000 NA   NA
 7690934 7690935 HELPY_0664 HELPY_0666   flgR FALSE 0.028 321.000 0.000 NA   NA
 7690935 7690936 HELPY_0666 HELPY_0667 flgR   TRUE 0.964 -3.000 0.282 NA   NA
 7690936 7690937 HELPY_0667 HELPY_0668   gyrA TRUE 0.883 0.000 0.012 NA   NA
 7690937 7690938 HELPY_0668 HELPY_0669 gyrA dgkA TRUE 0.879 16.000 0.009 1.000 N NA
 7690938 7690939 HELPY_0669 HELPY_0670 dgkA   TRUE 0.965 -7.000 0.562 NA   NA
 7690939 7690940 HELPY_0670 HELPY_0671     TRUE 0.941 11.000 0.100 NA   NA
 7690940 7690941 HELPY_0671 HELPY_0673     FALSE 0.157 187.000 0.088 NA   NA
 7690941 7690942 HELPY_0673 HELPY_0674     TRUE 0.977 17.000 0.882 NA Y NA
 7690942 7690943 HELPY_0674 HELPY_0675     TRUE 0.831 12.000 0.000 NA   NA
 7690943 7690944 HELPY_0675 HELPY_0676     TRUE 0.672 -88.000 0.000 NA   NA
 7690944 7690945 HELPY_0676 HELPY_0677     TRUE 0.661 -196.000 0.000 NA   NA
 7690945 7690946 HELPY_0677 HELPY_0678     FALSE 0.038 247.000 0.000 NA   NA
 7690946 7690947 HELPY_0678 HELPY_0679   atoE FALSE 0.343 129.000 0.348 NA   NA
 7690947 7690948 HELPY_0679 HELPY_0681 atoE scoB TRUE 0.962 14.000 0.074 1.000 Y NA
 7690948 7690949 HELPY_0681 HELPY_0682 scoB scoA TRUE 0.990 -3.000 0.083 0.002 Y NA
 7690949 7690950 HELPY_0682 HELPY_0683 scoA   TRUE 0.983 11.000 0.429 1.000 Y NA
 7690950 7690951 HELPY_0683 HELPY_0684     FALSE 0.056 284.000 0.000 1.000 N NA
 7690952 7690953 HELPY_0685 HELPY_0686 feoB fecA1 FALSE 0.099 251.000 0.000 1.000 Y NA
 7690955 7690956 HELPY_0688 HELPY_0689 glmU   FALSE 0.053 201.000 0.000 NA   NA
 7690956 7690957 HELPY_0689 HELPY_0690     TRUE 0.905 25.000 0.667 NA   NA
 7690957 7690958 HELPY_0690 HELPY_0691   nrdA FALSE 0.192 168.000 0.114 NA   NA
 7690958 7690959 HELPY_0691 HELPY_0692 nrdA   TRUE 0.534 62.000 0.054 1.000   NA
 7690959 7690960 HELPY_0692 HELPY_0693     FALSE 0.285 113.000 0.047 1.000   NA
 7690960 7690961 HELPY_0693 HELPY_0694   ogt TRUE 0.920 4.000 0.054 1.000   NA
 7690962 7690963 HELPY_0695 HELPY_0696     TRUE 0.795 14.000 0.000 NA   NA
 7690963 7690964 HELPY_0696 HELPY_0697   aspB FALSE 0.020 497.000 0.000 NA   NA
 7690964 7690965 HELPY_0697 HELPY_0698 aspB horF FALSE 0.183 163.000 0.082 NA   NA
 7690965 7690966 HELPY_0698 HELPY_0699 horF   FALSE 0.039 244.000 0.000 NA   NA
 7690966 7690967 HELPY_0699 HELPY_0700     FALSE 0.134 106.000 0.000 NA   NA
 7690967 7690968 HELPY_0700 HELPY_0701     TRUE 0.971 -13.000 0.500 NA Y NA
 7690968 7690969 HELPY_0701 HELPY_0702     TRUE 0.974 -3.000 0.400 NA N NA
 7690969 7690970 HELPY_0702 HELPY_0703     TRUE 0.950 2.000 0.400 NA   NA
 7690970 7690971 HELPY_0703 HELPY_0704     TRUE 0.712 19.000 0.000 NA   NA
 7690971 7690972 HELPY_0704 HELPY_0705     FALSE 0.203 78.000 0.000 NA   NA
 7690972 7690973 HELPY_0705 HELPY_0706   hemN TRUE 0.989 -3.000 0.419 0.018 N NA
 7690973 7690974 HELPY_0706 HELPY_0707 hemN   TRUE 0.965 0.000 0.419 NA   NA
 7690974 7690975 HELPY_0707 HELPY_0708   aroC TRUE 0.510 37.000 0.008 NA   NA
 7690975 7690976 HELPY_0708 HELPY_0709 aroC rnc TRUE 0.948 -3.000 0.030 1.000 N NA
 7690976 7690977 HELPY_0709 HELPY_0710 rnc rnhA TRUE 0.940 12.000 0.032 1.000 N NA
 7690977 7690978 HELPY_0710 HELPY_0711 rnhA   TRUE 0.856 -13.000 0.009 1.000   NA
 7690978 7690979 HELPY_0711 HELPY_0712     TRUE 0.949 11.000 0.083 1.000   NA
 7690979 7690980 HELPY_0712 HELPY_0713   gatB TRUE 0.901 0.000 0.008 1.000   NA
 7690980 7690981 HELPY_0713 HELPY_0714 gatB   TRUE 0.905 0.000 0.010 1.000   NA
 7690981 7690982 HELPY_0714 HELPY_0715     TRUE 0.708 45.000 0.130 1.000   NA
 7690982 7690983 HELPY_0715 HELPY_0716     TRUE 0.922 2.000 0.033 1.000 N NA
 7690983 7690984 HELPY_0716 HELPY_0717     TRUE 0.679 38.000 0.018 1.000 N NA
 7690985 7690986 HELPY_0718 HELPY_0719 pfr serB TRUE 0.891 16.000 0.014 1.000 N NA
 7690986 7690987 HELPY_0719 HELPY_0720 serB futB TRUE 0.560 40.000 0.009 1.000   NA
 7690988 7690989 HELPY_0721 HELPY_0722   aspA TRUE 0.942 6.000 0.071 1.000 N NA
 7690989 7690990 HELPY_0722 HELPY_0723 aspA murA TRUE 0.524 58.000 0.020 1.000 N NA
 7690990 7690991 HELPY_0723 HELPY_0724 murA   TRUE 0.854 3.000 0.017 NA   NA
 7690991 7690992 HELPY_0724 HELPY_0725   galU TRUE 0.968 12.000 0.533 NA   NA
 7690992 7690993 HELPY_0725 HELPY_0726 galU   TRUE 0.966 -3.000 0.323 NA   NA
 7690993 7690994 HELPY_0726 HELPY_0727     TRUE 0.926 9.000 0.080 NA   NA
 7690994 7690995 HELPY_0727 HELPY_0728   gltX2 TRUE 0.957 -3.000 0.088 1.000   NA
 7690995 7690996 HELPY_0728 HELPY_0729 gltX2 frxA FALSE 0.191 165.000 0.029 1.000 N NA
 7690996 7690997 HELPY_0729 HELPY_0730 frxA   TRUE 0.955 2.000 0.185 1.000 N NA
 7690997 7690998 HELPY_0730 HELPY_0731     FALSE 0.116 168.000 0.000 1.000 N NA
 7691001 7691002 HELPY_0734 HELPY_0735     TRUE 0.469 137.000 1.000 NA   NA
 7691003 7691004 HELPY_0736 HELPY_0737   hydD TRUE 0.932 2.000 0.171 NA   NA
 7691004 7691005 HELPY_0737 HELPY_0738 hydD hydC TRUE 0.983 -3.000 0.277 1.000 Y NA
 7691005 7691006 HELPY_0738 HELPY_0739 hydC hydB TRUE 0.987 13.000 0.270 0.033 Y NA
 7691006 7691007 HELPY_0739 HELPY_0740 hydB hydA TRUE 0.995 10.000 0.951 0.002 Y NA
 7691009 7691010 HELPY_0742 HELPY_0743     FALSE 0.143 102.000 0.000 NA   NA
 7691010 7691011 HELPY_0743 HELPY_0744     FALSE 0.040 236.000 0.000 NA   NA
 7691011 7691012 HELPY_0744 HELPY_0745   dapD TRUE 0.958 12.000 0.164 1.000   NA
 7691012 7691013 HELPY_0745 HELPY_0746 dapD ispG TRUE 0.893 3.000 0.009 1.000 N NA
 7691014 7691015 HELPY_0747 HELPY_0748 aspB murC TRUE 0.921 -7.000 0.016 1.000 N NA
 7691015 7691016 HELPY_0748 HELPY_0749 murC   TRUE 0.886 0.000 0.013 NA   NA
 7691016 7691017 HELPY_0749 HELPY_0750   mutS TRUE 0.868 7.000 0.021 NA   NA
 7691018 7691019 HELPY_0751 HELPY_0752 ppa   FALSE 0.296 55.000 0.000 NA   NA
 7691019 7691020 HELPY_0752 HELPY_0753     TRUE 0.839 0.000 0.000 NA   NA
 7691020 7691021 HELPY_0753 HELPY_0754   adk TRUE 0.559 26.000 0.000 NA   NA
 7691021 7691022 HELPY_0754 HELPY_0755 adk aspS TRUE 0.893 17.000 0.025 1.000 N NA
 7691022 7691023 HELPY_0755 HELPY_0756 aspS cheV2 TRUE 0.677 35.000 0.010 1.000 N NA
 7691024 7691025 HELPY_0757 HELPY_0758 lig   FALSE 0.127 154.000 0.008 1.000   NA
 7691025 7691026 HELPY_0758 HELPY_0759     FALSE 0.030 296.000 0.000 NA   NA
 7691026 7691027 HELPY_0759 HELPY_0760     FALSE 0.066 172.000 0.000 NA   NA
 7691027 7691028 HELPY_0760 HELPY_0761     TRUE 0.839 0.000 0.000 NA   NA
 7691028 7691029 HELPY_0761 HELPY_0762     TRUE 0.803 8.000 0.000 NA   NA
 7691030 7691031 HELPY_0763 HELPY_0764     TRUE 0.470 167.000 0.300 0.014   NA
 7691031 7691032 HELPY_0764 HELPY_0765   hefC TRUE 0.983 -3.000 0.281 0.051   NA
 7691032 7691033 HELPY_0765 HELPY_0766 hefC hefB TRUE 0.980 10.000 0.844 NA N NA
 7691033 7691034 HELPY_0766 HELPY_0767 hefB hefA TRUE 0.983 11.000 0.655 NA Y NA
 7691034 7691035 HELPY_0767 HELPY_0768 hefA hemE TRUE 0.919 10.000 0.010 1.000 N NA
 7691035 7691036 HELPY_0768 HELPY_0769 hemE   FALSE 0.297 69.000 0.010 NA   NA
 7691036 7691037 HELPY_0769 HELPY_0770   magIII TRUE 0.928 -3.000 0.042 NA   NA
 7691037 7691038 HELPY_0770 HELPY_0771 magIII flaA FALSE 0.278 128.000 0.042 1.000 N NA
 7691039 7691040 HELPY_0772 HELPY_0773     TRUE 0.604 72.000 0.133 1.000 N NA
 7691040 7691041 HELPY_0773 HELPY_0774   bioF TRUE 0.848 23.000 0.033 1.000 N NA
 7691041 7691042 HELPY_0774 HELPY_0775 bioF pbpA TRUE 0.940 1.000 0.050 1.000 N NA
 7691043 7691044 HELPY_0776 HELPY_0778     FALSE 0.043 225.000 0.000 NA   NA
 7691044 7691045 HELPY_0778 HELPY_0779     FALSE 0.092 132.000 0.000 NA   NA
 7691045 7691046 HELPY_0779 HELPY_0780     TRUE 0.971 10.000 0.667 NA   NA
 7691046 7691047 HELPY_0780 HELPY_0781     FALSE 0.406 101.000 0.214 NA   NA
 7691047 7691048 HELPY_0781 HELPY_0782     TRUE 0.990 -3.000 0.667 0.055 N NA
 7691048 7691049 HELPY_0782 HELPY_0783   oorC FALSE 0.312 155.000 0.139 1.000 N NA
 7691049 7691050 HELPY_0783 HELPY_0784 oorC oorB TRUE 0.992 0.000 0.324 0.003 Y NA
 7691050 7691051 HELPY_0784 HELPY_0785 oorB oorA TRUE 0.992 2.000 0.771 0.003 Y NA
 7691051 7691052 HELPY_0785 HELPY_0786 oorA oorD TRUE 0.992 0.000 0.316 0.003 Y NA
 7691052 7691053 HELPY_0786 HELPY_0787 oorD pabC FALSE 0.086 184.000 0.012 NA   NA
 7691054 7691055 HELPY_0788 HELPY_0789     TRUE 0.945 2.000 0.303 NA   NA
 7691055 7691056 HELPY_0789 HELPY_0790   nth TRUE 0.896 3.000 0.011 1.000 N NA
 7691056 7691057 HELPY_0790 HELPY_0791 nth fliN FALSE 0.347 82.000 0.009 1.000 N NA
 7691057 7691058 HELPY_0791 HELPY_0792 fliN   TRUE 0.964 -3.000 0.281 NA   NA
 7691058 7691059 HELPY_0792 HELPY_0793     TRUE 0.934 -16.000 0.333 NA   NA
 7691059 7691060 HELPY_0793 HELPY_0794   pyrC2 TRUE 0.904 4.000 0.015 1.000 N NA
 7691060 7691061 HELPY_0794 HELPY_0795 pyrC2   TRUE 0.846 18.000 0.018 NA N NA
 7691061 7691062 HELPY_0795 HELPY_0797     TRUE 0.939 7.000 0.216 NA   NA
 7691062 7691063 HELPY_0797 HELPY_0798     TRUE 0.964 6.000 0.727 NA   NA
 7691063 7691064 HELPY_0798 HELPY_0799   folD FALSE 0.116 226.000 0.025 1.000 N NA
 7691064 7691065 HELPY_0799 HELPY_0800 folD lepB TRUE 0.963 0.000 0.117 1.000 N NA
 7691065 7691066 HELPY_0800 HELPY_0801 lepB   TRUE 0.967 9.000 0.055 0.020   NA
 7691066 7691067 HELPY_0801 HELPY_0802   rpi TRUE 0.726 33.000 0.042 1.000   NA
 7691067 7691068 HELPY_0802 HELPY_0803 rpi   TRUE 0.600 67.000 0.277 NA   NA
 7691068 7691069 HELPY_0803 HELPY_0804   apt FALSE 0.429 58.000 0.028 NA   NA
 7691069 7691070 HELPY_0804 HELPY_0805 apt   TRUE 0.868 15.000 0.026 NA   NA
 7691070 7691071 HELPY_0805 HELPY_0806   pepA TRUE 0.684 48.000 0.250 NA   NA
 7691071 7691072 HELPY_0806 HELPY_0807 pepA gtp1 TRUE 0.916 2.000 0.026 1.000 N NA
 7691072 7691073 HELPY_0807 HELPY_0808 gtp1   FALSE 0.114 135.000 0.009 NA   NA
 7691075 7691076 HELPY_0811 HELPY_0812 dapF   FALSE 0.153 113.000 0.009 NA   NA
 7691078 7691079 HELPY_0814 HELPY_0815   rpsU FALSE 0.382 101.000 0.154 NA   NA
 7691079 7691080 HELPY_0815 HELPY_0816 rpsU fabG TRUE 0.616 39.000 0.017 1.000   NA
 7691080 7691081 HELPY_0816 HELPY_0817 fabG acpP TRUE 0.478 231.000 0.321 0.009 Y NA
 7691081 7691082 HELPY_0817 HELPY_0818 acpP fabF TRUE 0.499 104.000 0.066 1.000 Y NA
 7691082 7691083 HELPY_0818 HELPY_0819 fabF accA TRUE 0.901 23.000 0.046 1.000 Y NA
 7691083 7691084 HELPY_0819 HELPY_0820 accA   FALSE 0.020 469.000 0.000 NA   NA
 7691085 7691086 HELPY_0821 HELPY_0822     TRUE 0.981 -3.000 0.882 NA   NA
 7691086 7691087 HELPY_0822 HELPY_0823   nshR TRUE 0.898 13.000 0.033 NA   NA
 7691087 7691088 HELPY_0823 HELPY_0824 nshR   TRUE 0.917 13.000 0.031 1.000   NA
 7691088 7691089 HELPY_0824 HELPY_0825   rpmE TRUE 0.780 25.000 0.031 1.000   NA
 7691090 7691091 HELPY_0826 HELPY_0827 rho murI TRUE 0.694 38.000 0.023 1.000 N NA
 7691091 7691092 HELPY_0827 HELPY_0828 murI   TRUE 0.888 12.000 0.002 1.000   NA
 7691093 7691094 HELPY_0829 HELPY_0830   era TRUE 0.952 -3.000 0.125 NA   NA
 7691094 7691095 HELPY_0830 HELPY_0831 era hslU TRUE 0.940 0.000 0.051 1.000   NA
 7691095 7691096 HELPY_0831 HELPY_0832 hslU hsp20 TRUE 0.988 0.000 0.752 1.000 Y NA
 7691096 7691097 HELPY_0832 HELPY_0833 hsp20 rplI TRUE 0.923 4.000 0.034 1.000 N NA
 7691097 7691098 HELPY_0833 HELPY_0834 rplI   FALSE 0.270 62.000 0.000 NA   NA
 7691098 7691099 HELPY_0834 HELPY_0835     FALSE 0.208 76.000 0.000 NA   NA
 7691099 7691100 HELPY_0835 HELPY_0836     TRUE 0.971 -13.000 0.500 NA Y NA
 7691100 7691101 HELPY_0836 HELPY_0837     TRUE 0.974 -3.000 0.400 NA N NA
 7691101 7691102 HELPY_0837 HELPY_0838     TRUE 0.950 2.000 0.400 NA   NA
 7691102 7691103 HELPY_0838 HELPY_0839     FALSE 0.285 58.000 0.000 NA   NA
 7691105 7691106 HELPY_0841 HELPY_0842   lpp TRUE 0.866 25.000 0.286 NA   NA
 7691106 7691107 HELPY_0842 HELPY_0843 lpp dapB FALSE 0.022 431.000 0.000 NA   NA
 7691107 7691108 HELPY_0843 HELPY_0844 dapB glcD TRUE 0.791 23.000 0.009 1.000 N NA
 7691108 7691109 HELPY_0844 HELPY_0845 glcD   TRUE 0.785 2.000 0.000 NA   NA
 7691109 7691110 HELPY_0845 HELPY_0846     TRUE 0.926 11.000 0.056 NA   NA
 7691110 7691111 HELPY_0846 HELPY_0847     TRUE 0.972 0.000 0.269 1.000 N NA
 7691111 7691112 HELPY_0847 HELPY_0848     FALSE 0.049 208.000 0.000 NA   NA
 7691112 7691113 HELPY_0848 HELPY_0849     TRUE 0.680 -73.000 0.000 NA   NA
 7691113 7691114 HELPY_0849 HELPY_0850     TRUE 0.766 -13.000 0.000 NA   NA
 7691114 7691115 HELPY_0850 HELPY_0851   gyrB TRUE 0.478 46.000 0.008 1.000   NA
 7691115 7691116 HELPY_0851 HELPY_0852 gyrB dnaN TRUE 0.970 13.000 0.114 1.000 Y NA
 7691116 7691117 HELPY_0852 HELPY_0853 dnaN   FALSE 0.292 56.000 0.000 NA   NA
 7691117 7691118 HELPY_0853 HELPY_0854     TRUE 0.670 -91.000 0.000 NA   NA
 7691118 7691119 HELPY_0854 HELPY_0855     TRUE 0.831 12.000 0.000 NA   NA
 7691119 7691120 HELPY_0855 HELPY_0856     TRUE 0.991 11.000 0.800 0.002   NA
 7691121 7691122 HELPY_0857 HELPY_0858     TRUE 0.895 -10.000 0.043 NA   NA
 7691123 7691124 HELPY_0859 HELPY_0860 murD mraY TRUE 0.991 2.000 0.647 0.007 Y NA
 7691125 7691126 HELPY_0861 HELPY_0862 hpaA rpL28 FALSE 0.233 100.000 0.008 1.000   NA
 7691126 7691127 HELPY_0862 HELPY_0864 rpL28   FALSE 0.161 183.000 0.025 1.000 N NA
 7691128 7691129 HELPY_0865 HELPY_0866     TRUE 0.814 13.000 0.000 NA   NA
 7691129 7691130 HELPY_0866 HELPY_0867     TRUE 0.712 -28.000 0.000 NA   NA
 7691130 7691131 HELPY_0867 HELPY_0868   ruvA FALSE 0.033 276.000 0.000 NA   NA
 7691131 7691132 HELPY_0868 HELPY_0869 ruvA   TRUE 0.615 26.000 0.008 NA   NA
 7691133 7691134 HELPY_0870 HELPY_0871   cysS TRUE 0.910 1.000 0.027 1.000   NA
 7691134 7691135 HELPY_0871 HELPY_0872 cysS vacA FALSE 0.061 223.000 0.000 1.000   NA
 7691136 7691137 HELPY_0873 HELPY_0874 fecE fecD TRUE 0.990 0.000 1.000 1.000 Y NA
 7691137 7691138 HELPY_0874 HELPY_0875 fecD   TRUE 0.923 -7.000 0.035 1.000   NA
 7691140 7691141 HELPY_0877 HELPY_0878     TRUE 0.579 78.000 0.429 NA   NA
 7691141 7691142 HELPY_0878 HELPY_0879     TRUE 0.959 -19.000 0.857 NA   NA
 7691142 7691143 HELPY_0879 HELPY_0880   babA FALSE 0.030 296.000 0.000 NA   NA
 7691143 7691144 HELPY_0880 HELPY_tRNA25 babA   FALSE 0.051 205.000 0.000 NA   NA
 7691144 7691145 HELPY_tRNA25 HELPY_tRNA24     TRUE 0.814 13.000 0.000 NA   NA
 7691145 7691146 HELPY_tRNA24 HELPY_0882   hypD FALSE 0.017 677.000 0.000 NA   NA
 7691146 7691147 HELPY_0882 HELPY_0883 hypD hypC TRUE 0.935 18.000 0.084 NA Y NA
 7691147 7691148 HELPY_0883 HELPY_0884 hypC hypB TRUE 0.981 0.000 0.463 NA Y NA
 7691148 7691149 HELPY_0884 HELPY_0885 hypB   FALSE 0.129 109.000 0.000 NA   NA
 7691149 7691150 HELPY_0885 HELPY_0886     TRUE 0.835 11.000 0.000 NA   NA
 7691150 7691151 HELPY_0886 HELPY_0887     FALSE 0.055 196.000 0.000 NA   NA
 7691151 7691152 HELPY_0887 HELPY_0888     TRUE 0.685 -67.000 0.000 NA   NA
 7691152 7691153 HELPY_0888 HELPY_0889   pta TRUE 0.741 17.000 0.000 NA   NA
 7691154 7691155 HELPY_0890 HELPY_0891   flgD TRUE 0.633 51.000 0.158 NA   NA
 7691155 7691156 HELPY_0891 HELPY_0892 flgD flgE_2 TRUE 0.981 -3.000 0.368 NA Y NA
 7691156 7691157 HELPY_0892 HELPY_0893 flgE_2   TRUE 0.745 52.000 0.571 NA   NA
 7691157 7691158 HELPY_0893 HELPY_0894   hpy8IM TRUE 0.868 22.000 0.127 NA   NA
 7691158 7691159 HELPY_0894 HELPY_0895 hpy8IM   TRUE 0.973 4.000 0.048 0.053 Y NA
 7691159 7691160 HELPY_0895 HELPY_0897   hopC FALSE 0.018 587.000 0.000 NA   NA
 7691160 7691161 HELPY_0897 HELPY_0898 hopC hopB TRUE 0.907 22.000 0.375 NA   NA
 7691162 7691163 HELPY_0900 HELPY_0901   frpB2 FALSE 0.037 326.000 0.000 1.000   NA
 7691163 7691164 HELPY_0901 HELPY_0902 frpB2   FALSE 0.100 184.000 0.022 NA   NA
 7691164 7691165 HELPY_0902 HELPY_0903   pyrAb TRUE 0.863 5.000 0.020 NA   NA
 7691165 7691166 HELPY_0903 HELPY_0904 pyrAb   FALSE 0.207 98.000 0.011 NA   NA
 7691167 7691168 HELPY_0905 HELPY_0906 gap1   TRUE 0.601 81.000 0.368 1.000   NA
 7691168 7691169 HELPY_0906 HELPY_0907   hopK TRUE 0.729 52.000 0.500 NA   NA
 7691171 7691172 HELPY_0909 HELPY_0910 recR truD TRUE 0.911 -3.000 0.008 1.000   NA
 7691172 7691173 HELPY_0910 HELPY_0911 truD   TRUE 0.896 -13.000 0.034 1.000   NA
 7691173 7691174 HELPY_0911 HELPY_0912   folE TRUE 0.953 1.000 0.102 1.000 N NA
 7691174 7691175 HELPY_0912 HELPY_0913 folE ispA TRUE 0.964 16.000 0.167 1.000 Y NA
 7691175 7691176 HELPY_0913 HELPY_0914 ispA surE TRUE 0.943 -3.000 0.041 1.000   NA
 7691176 7691177 HELPY_0914 HELPY_0915 surE   TRUE 0.895 -3.000 0.012 NA   NA
 7691177 7691178 HELPY_0915 HELPY_0916     TRUE 0.865 2.000 0.023 NA   NA
 7691178 7691179 HELPY_0916 HELPY_0917     TRUE 0.951 3.000 0.139 1.000 N NA
 7691179 7691180 HELPY_0917 HELPY_0918     FALSE 0.274 97.000 0.015 1.000   NA
 7691180 7691181 HELPY_0918 HELPY_0919     FALSE 0.156 97.000 0.000 NA   NA
 7691182 7691183 HELPY_0920 HELPY_0921     TRUE 0.687 -57.000 0.000 NA   NA
 7691183 7691184 HELPY_0921 HELPY_0922     FALSE 0.022 437.000 0.000 NA   NA
 7691184 7691185 HELPY_0922 HELPY_0923     FALSE 0.196 81.000 0.000 NA   NA
 7691185 7691186 HELPY_0923 HELPY_0924     FALSE 0.167 93.000 0.000 NA   NA
 7691186 7691187 HELPY_0924 HELPY_0925     FALSE 0.385 68.000 0.031 NA   NA
 7691187 7691188 HELPY_0925 HELPY_0926     TRUE 0.991 8.000 0.594 0.023 Y NA
 7691188 7691189 HELPY_0926 HELPY_0927   alr TRUE 0.553 68.000 0.056 1.000 N NA
 7691189 7691190 HELPY_0927 HELPY_0928 alr   TRUE 0.962 7.000 0.267 1.000 N NA
 7691190 7691191 HELPY_0928 HELPY_0929     TRUE 0.864 41.000 0.267 1.000 Y NA
 7691191 7691192 HELPY_0929 HELPY_0930     TRUE 0.933 23.000 0.667 NA N NA
 7691193 7691194 HELPY_tRNA4 HELPY_tRNA5     FALSE 0.386 42.000 0.000 NA   NA
 7691194 7691195 HELPY_tRNA5 HELPY_tRNA6     FALSE 0.214 74.000 0.000 NA   NA
 7691195 7691196 HELPY_tRNA6 HELPY_tRNA7     FALSE 0.336 48.000 0.000 NA   NA
 7691196 7691197 HELPY_tRNA7 HELPY_0931     FALSE 0.102 126.000 0.000 NA   NA
 7691197 7691198 HELPY_0931 HELPY_0932     FALSE 0.027 326.000 0.000 NA   NA
 7691199 7691200 HELPY_0933 HELPY_0934     FALSE 0.375 43.000 0.000 NA   NA
 7691200 7691201 HELPY_0934 HELPY_0935     TRUE 0.880 10.000 0.013 NA   NA
 7691201 7691202 HELPY_0935 HELPY_0936   accD TRUE 0.890 14.000 0.035 NA   NA
 7691203 7691204 HELPY_0937 HELPY_0938     TRUE 0.921 11.000 0.047 NA   NA
 7691205 7691206 HELPY_0939 HELPY_0940   rdxA TRUE 0.760 65.000 1.000 NA   NA
 7691206 7691207 HELPY_0940 HELPY_0941 rdxA lgt TRUE 0.936 -3.000 0.013 1.000 N NA
 7691207 7691208 HELPY_0941 HELPY_0942 lgt rluC TRUE 0.924 10.000 0.013 1.000 N NA
 7691208 7691209 HELPY_0942 HELPY_0943 rluC waaA TRUE 0.929 19.000 0.133 1.000 N NA
 7691209 7691210 HELPY_0943 HELPY_0944 waaA   TRUE 0.934 1.000 0.122 NA   NA
 7691210 7691211 HELPY_0944 HELPY_0945     TRUE 0.960 10.000 0.342 NA   NA
 7691211 7691212 HELPY_0945 HELPY_0946   glyQ TRUE 0.888 2.000 0.041 NA   NA
 7691212 7691213 HELPY_0946 HELPY_0947 glyQ gpsA TRUE 0.906 14.000 0.013 1.000 N NA
 7691213 7691214 HELPY_0947 HELPY_0948 gpsA acpP2 FALSE 0.154 132.000 0.000 1.000 N NA
 7691214 7691215 HELPY_0948 HELPY_0949 acpP2   FALSE 0.306 68.000 0.000 1.000   NA
 7691215 7691216 HELPY_0949 HELPY_0950     TRUE 0.839 0.000 0.000 NA   NA
 7691216 7691217 HELPY_0950 HELPY_0951     TRUE 0.731 -21.000 0.000 NA   NA
 7691217 7691218 HELPY_0951 HELPY_0952     FALSE 0.276 60.000 0.000 NA   NA
 7691218 7691219 HELPY_0952 HELPY_0953     FALSE 0.262 64.000 0.000 NA   NA
 7691219 7691220 HELPY_0953 HELPY_0954     TRUE 0.794 7.000 0.000 NA   NA
 7691220 7691221 HELPY_0954 HELPY_0955     FALSE 0.019 527.000 0.000 NA   NA
 7691221 7691222 HELPY_0955 HELPY_0956     TRUE 0.951 16.000 0.514 NA   NA
 7691222 7691223 HELPY_0956 HELPY_0957     TRUE 0.976 -3.000 0.464 NA N NA
 7691223 7691224 HELPY_0957 HELPY_0958     TRUE 0.988 -3.000 0.857 NA Y NA
 7691224 7691225 HELPY_0958 HELPY_0959   glyS TRUE 0.904 -10.000 0.013 1.000 N NA
 7691226 7691227 HELPY_0960 HELPY_0961   gpmI TRUE 0.869 13.000 0.013 NA   NA
 7691227 7691228 HELPY_0961 HELPY_0962 gpmI gatC TRUE 0.893 15.000 0.009 1.000 N NA
 7691230 7691231 HELPY_0964 HELPY_0965   ftsA TRUE 0.945 15.000 0.184 1.000   NA
 7691231 7691232 HELPY_0965 HELPY_0967 ftsA ftsZ TRUE 0.456 125.000 0.114 1.000 Y NA
 7691234 7691235 HELPY_0973 HELPY_0974     TRUE 0.865 -7.000 0.011 NA   NA
 7691235 7691236 HELPY_0974 HELPY_5S_3     TRUE 0.715 -26.000 0.000 NA   NA
 7691236 7691237 HELPY_5S_3 HELPY_0976     FALSE 0.023 411.000 0.000 NA   NA
 7691237 7691238 HELPY_0976 HELPY_0977     FALSE 0.031 287.000 0.000 NA   NA
 7691239 7691240 HELPY_0978 HELPY_0979     TRUE 0.700 -36.000 0.000 NA   NA
 7691240 7691241 HELPY_0979 HELPY_0980     FALSE 0.044 224.000 0.000 NA   NA
 7691241 7691242 HELPY_0980 HELPY_0981     FALSE 0.241 68.000 0.000 NA   NA
 7691242 7691243 HELPY_0981 HELPY_0982     FALSE 0.196 81.000 0.000 NA   NA
 7691243 7691244 HELPY_0982 HELPY_0983     TRUE 0.817 -7.000 0.000 NA   NA
 7691244 7691245 HELPY_0983 HELPY_0984     FALSE 0.433 39.000 0.000 NA   NA
 7691245 7691246 HELPY_0984 HELPY_0985     TRUE 0.794 7.000 0.000 NA   NA
 7691246 7691247 HELPY_0985 HELPY_0986     TRUE 0.664 -160.000 0.000 NA   NA
 7691247 7691248 HELPY_0986 HELPY_0987     FALSE 0.296 55.000 0.000 NA   NA
 7691248 7691249 HELPY_0987 HELPY_0988     TRUE 0.562 111.000 1.000 NA   NA
 7691249 7691250 HELPY_0988 HELPY_0989     TRUE 0.982 -3.000 1.000 NA   NA
 7691250 7691251 HELPY_0989 HELPY_0990     TRUE 0.872 -6.000 0.000 1.000   NA
 7691251 7691252 HELPY_0990 HELPY_0991     FALSE 0.281 59.000 0.000 NA   NA
 7691252 7691253 HELPY_0991 HELPY_0992     TRUE 0.559 26.000 0.000 NA   NA
 7691253 7691254 HELPY_0992 HELPY_0993     TRUE 0.854 -3.000 0.000 NA   NA
 7691254 7691255 HELPY_0993 HELPY_0994     FALSE 0.306 118.000 0.136 NA   NA
 7691257 7691258 HELPY_5S_2 HELPY_23S_2     FALSE 0.042 228.000 0.000 NA   NA
 7691259 7691260 HELPY_1000 HELPY_1001     TRUE 0.675 53.000 0.286 NA   NA
 7691260 7691261 HELPY_1001 HELPY_1002     TRUE 0.672 72.000 0.714 NA   NA
 7691261 7691262 HELPY_1002 HELPY_1003     TRUE 0.939 -33.000 0.571 NA   NA
 7691262 7691263 HELPY_1003 HELPY_1004     FALSE 0.115 115.000 0.000 NA   NA
 7691263 7691264 HELPY_1004 HELPY_1005     TRUE 0.854 -3.000 0.000 NA   NA
 7691265 7691266 HELPY_1006 HELPY_1007 speA   TRUE 0.914 15.000 0.024 1.000 N NA
 7691266 7691267 HELPY_1007 HELPY_1008     TRUE 0.933 5.000 0.093 NA N NA
 7691267 7691268 HELPY_1008 HELPY_1009     TRUE 0.898 15.000 0.053 NA   NA
 7691268 7691269 HELPY_1009 HELPY_1010     TRUE 0.881 4.000 0.033 NA   NA
 7691269 7691270 HELPY_1010 HELPY_1011   metS TRUE 0.939 0.000 0.046 1.000   NA
 7691272 7691273 HELPY_1013 HELPY_tRNA23     FALSE 0.018 587.000 0.000 NA   NA
 7691273 7691274 HELPY_tRNA23 HELPY_tRNA22     TRUE 0.727 18.000 0.000 NA   NA
 7691274 7691275 HELPY_tRNA22 HELPY_tRNA21     FALSE 0.276 60.000 0.000 NA   NA
 7691275 7691276 HELPY_tRNA21 HELPY_tRNA20     FALSE 0.241 68.000 0.000 NA   NA
 7691276 7691277 HELPY_tRNA20 HELPY_1014     FALSE 0.059 185.000 0.000 NA   NA
 7691277 7691278 HELPY_1014 HELPY_1015   guaA FALSE 0.280 84.000 0.007 1.000   NA
 7691278 7691279 HELPY_1015 HELPY_1016 guaA   TRUE 0.862 11.000 0.007 NA   NA
 7691279 7691280 HELPY_1016 HELPY_1018   bisC FALSE 0.372 174.000 0.875 NA   NA
 7691280 7691281 HELPY_1018 HELPY_1019 bisC   FALSE 0.404 104.000 0.241 NA   NA
 7691281 7691282 HELPY_1019 HELPY_1020     TRUE 0.802 26.000 0.105 NA   NA
 7691282 7691283 HELPY_1020 HELPY_1021     TRUE 0.863 19.000 0.014 1.000 N NA
 7691284 7691285 HELPY_1022 HELPY_1023 pheS pheT TRUE 0.994 0.000 0.574 0.001 Y NA
 7691285 7691286 HELPY_1023 HELPY_1024 pheT aroA TRUE 0.907 16.000 0.028 1.000 N NA
 7691286 7691287 HELPY_1024 HELPY_1025 aroA ispH TRUE 0.924 -10.000 0.032 1.000 N NA
 7691287 7691288 HELPY_1025 HELPY_1026 ispH rps1 FALSE 0.326 121.000 0.058 1.000 N NA
 7691288 7691289 HELPY_1026 HELPY_1027 rps1   TRUE 0.568 29.000 0.003 NA   NA
 7691289 7691290 HELPY_1027 HELPY_1028   serA TRUE 0.795 16.000 0.004 NA   NA
 7691290 7691291 HELPY_1028 HELPY_1029 serA ubiD TRUE 0.940 10.000 0.016 NA Y NA
 7691291 7691292 HELPY_1029 HELPY_1030 ubiD   TRUE 0.887 10.000 0.017 NA   NA
 7691292 7691293 HELPY_1030 HELPY_1031     TRUE 0.850 2.000 0.015 NA   NA
 7691293 7691294 HELPY_1031 HELPY_1032   cheV3 TRUE 0.925 4.000 0.065 1.000   NA
 7691294 7691295 HELPY_1032 HELPY_1033 cheV3 cheA TRUE 0.875 56.000 0.147 0.007 Y NA
 7691295 7691296 HELPY_1033 HELPY_1034 cheA cheW TRUE 0.989 -3.000 0.137 0.011 Y NA
 7691298 7691299 HELPY_1036 HELPY_1037 sodB   TRUE 0.553 52.000 0.018 1.000 N NA
 7691300 7691301 HELPY_1038 HELPY_1039 priA   TRUE 0.780 -15.000 0.003 NA   NA
 7691301 7691302 HELPY_1039 HELPY_1040     TRUE 0.958 13.000 0.400 NA   NA
 7691305 7691306 HELPY_1043 HELPY_1044   hemG TRUE 0.961 -3.000 0.068 1.000 N NA
 7691306 7691307 HELPY_1044 HELPY_1045 hemG gdhA TRUE 0.443 72.000 0.020 1.000 N NA
 7691308 7691309 HELPY_1046 HELPY_1047 futA ccsA TRUE 0.976 10.000 0.176 0.065   NA
 7691309 7691310 HELPY_1047 HELPY_1048 ccsA   TRUE 0.986 9.000 0.750 1.000 Y NA
 7691310 7691311 HELPY_1048 HELPY_1049   hemH TRUE 0.444 73.000 0.024 1.000 N NA
 7691312 7691313 HELPY_1050 HELPY_1051     TRUE 0.929 1.000 0.098 NA   NA
 7691314 7691315 HELPY_1052 HELPY_1053   dcd FALSE 0.118 159.000 0.017 NA   NA
 7691316 7691317 HELPY_1054 HELPY_1055 accB accC TRUE 0.960 6.000 0.071 1.000 Y NA
 7691317 7691318 HELPY_1055 HELPY_1056 accC   FALSE 0.314 93.000 0.023 1.000   NA
 7691318 7691319 HELPY_1056 HELPY_1057     TRUE 0.960 -3.000 0.222 NA   NA
 7691319 7691320 HELPY_1057 HELPY_1058     TRUE 0.605 93.000 0.778 NA   NA
 7691320 7691321 HELPY_1058 HELPY_1059   pseC TRUE 0.934 -3.000 0.053 NA   NA
 7691323 7691324 HELPY_1060 HELPY_1061 nrdB pcm TRUE 0.968 10.000 0.227 1.000 N NA
 7691324 7691325 HELPY_1061 HELPY_1062 pcm   TRUE 0.908 11.000 0.012 1.000   NA
 7691325 7691326 HELPY_1062 HELPY_1063   truA TRUE 0.931 1.000 0.059 1.000   NA
 7691328 7691329 HELPY_tRNA8 HELPY_tRNA9     TRUE 0.741 17.000 0.000 NA   NA
 7691329 7691330 HELPY_tRNA9 HELPY_1065     FALSE 0.022 433.000 0.000 NA   NA
 7691330 7691331 HELPY_1065 HELPY_1066     TRUE 0.847 18.000 0.035 NA   NA
 7691332 7691333 HELPY_1067 HELPY_1068 hcpC eda FALSE 0.415 75.000 0.034 1.000   NA
 7691333 7691334 HELPY_1068 HELPY_1069 eda edd TRUE 0.970 19.000 0.523 1.000 Y NA
 7691335 7691336 HELPY_1070 HELPY_1071 zwf pgl TRUE 0.959 11.000 0.028 1.000 Y NA
 7691336 7691337 HELPY_1071 HELPY_1072 pgl glk TRUE 0.960 -13.000 0.117 1.000 Y NA
 7691337 7691338 HELPY_1072 HELPY_1073 glk   FALSE 0.206 161.000 0.061 1.000   NA
 7691342 7691343 HELPY_1077 HELPY_1078 porG porD TRUE 0.985 16.000 0.205 0.003 Y NA
 7691343 7691344 HELPY_1078 HELPY_1079 porD porA TRUE 0.994 10.000 0.625 0.003 Y NA
 7691344 7691345 HELPY_1079 HELPY_1081 porA porB TRUE 0.990 13.000 0.268 0.003 Y NA
 7691345 7691346 HELPY_1081 HELPY_1082 porB purB FALSE 0.236 110.000 0.007 1.000 N NA
 7691346 7691347 HELPY_1082 HELPY_1083 purB   FALSE 0.272 71.000 0.007 NA   NA
 7691348 7691349 HELPY_1084 HELPY_1085 uvrB   FALSE 0.401 41.000 0.000 NA   NA
 7691349 7691350 HELPY_1085 HELPY_1086     TRUE 0.814 13.000 0.000 NA   NA
 7691350 7691351 HELPY_1086 HELPY_1087     TRUE 0.712 -28.000 0.000 NA   NA
 7691351 7691352 HELPY_1087 HELPY_1088   hcpX FALSE 0.023 404.000 0.000 NA   NA
 7691352 7691353 HELPY_1088 HELPY_1090 hcpX ggt FALSE 0.046 267.000 0.000 1.000   NA
 7691353 7691354 HELPY_1090 HELPY_1091 ggt flgK FALSE 0.079 216.000 0.000 1.000 N NA
 7691354 7691355 HELPY_1091 HELPY_1092 flgK   TRUE 0.958 2.000 0.558 NA   NA
 7691355 7691356 HELPY_1092 HELPY_1093   hpyAVIIIM FALSE 0.285 132.000 0.207 NA   NA
 7691356 7691357 HELPY_1093 HELPY_1094 hpyAVIIIM flgM FALSE 0.339 141.000 0.258 1.000   NA
 7691357 7691358 HELPY_1094 HELPY_1095 flgM   TRUE 0.794 37.000 0.290 NA   NA
 7691358 7691359 HELPY_1095 HELPY_1096   slyD TRUE 0.790 32.000 0.200 NA   NA
 7691359 7691360 HELPY_1096 HELPY_1097 slyD   TRUE 0.961 -13.000 0.543 1.000   NA
 7691360 7691361 HELPY_1097 HELPY_1098   palA TRUE 0.975 8.000 0.794 1.000   NA
 7691361 7691362 HELPY_1098 HELPY_1099 palA tolB TRUE 0.776 67.000 0.702 1.000 N NA
 7691362 7691363 HELPY_1099 HELPY_1100 tolB   TRUE 0.945 -3.000 0.085 NA   NA
 7691363 7691364 HELPY_1100 HELPY_1101   exbD1 TRUE 0.880 19.000 0.086 NA   NA
 7691364 7691365 HELPY_1101 HELPY_1102 exbD1 exbB1 TRUE 0.938 53.000 0.944 0.029 Y NA
 7691365 7691366 HELPY_1102 HELPY_1103 exbB1 atpC TRUE 0.944 11.000 0.036 1.000 N NA
 7691366 7691367 HELPY_1103 HELPY_1104 atpC atpD TRUE 0.993 7.000 0.837 0.007 Y NA
 7691367 7691368 HELPY_1104 HELPY_1105 atpD atpG TRUE 0.984 22.000 0.724 0.007 Y NA
 7691368 7691369 HELPY_1105 HELPY_1106 atpG atpA TRUE 0.992 15.000 0.846 0.007 Y NA
 7691369 7691370 HELPY_1106 HELPY_1107 atpA atpH TRUE 0.984 23.000 0.864 0.007 Y NA
 7691370 7691371 HELPY_1107 HELPY_1108 atpH atpF TRUE 0.986 1.000 0.132 0.007 Y NA
 7691371 7691372 HELPY_1108 HELPY_1109 atpF atpX TRUE 0.983 4.000 0.110 0.007 Y NA
 7691372 7691373 HELPY_1109 HELPY_1110 atpX   FALSE 0.323 111.000 0.037 1.000 N NA
 7691373 7691374 HELPY_1110 HELPY_1111     TRUE 0.984 0.000 0.827 1.000 N NA
 7691374 7691375 HELPY_1111 HELPY_1112   birA TRUE 0.926 3.000 0.040 1.000 N NA
 7691375 7691376 HELPY_1112 HELPY_1113 birA fmt TRUE 0.931 9.000 0.029 1.000 N NA
 7691376 7691377 HELPY_1113 HELPY_1114 fmt   TRUE 0.714 24.000 0.005 1.000   NA
 7691377 7691378 HELPY_1114 HELPY_1115     TRUE 0.538 46.000 0.041 NA   NA
 7691380 7691381 HELPY_16S_2 HELPY_1119     FALSE 0.017 748.000 0.000 NA   NA
 7691381 7691382 HELPY_1119 HELPY_1121   rplS FALSE 0.018 651.000 0.000 NA   NA
 7691382 7691383 HELPY_1121 HELPY_1122 rplS trmD TRUE 0.963 22.000 0.567 1.000 Y NA
 7691383 7691384 HELPY_1122 HELPY_1123 trmD rimN TRUE 0.984 1.000 0.672 1.000 Y NA
 7691384 7691385 HELPY_1123 HELPY_1124 rimN   TRUE 0.962 1.000 0.324 1.000   NA
 7691385 7691386 HELPY_1124 HELPY_1125   rpsP TRUE 0.947 17.000 0.385 1.000   NA
 7691386 7691387 HELPY_1125 HELPY_1126 rpsP ffh TRUE 0.669 74.000 0.361 1.000 N NA
 7691387 7691388 HELPY_1126 HELPY_1127 ffh valS TRUE 0.927 16.000 0.006 0.091 N NA
 7691389 7691390 HELPY_1128 HELPY_1129   murG TRUE 0.898 11.000 0.022 NA   NA
 7691390 7691391 HELPY_1129 HELPY_1130 murG hopI FALSE 0.198 109.000 0.020 NA   NA
 7691391 7691392 HELPY_1130 HELPY_1131 hopI hopL TRUE 0.895 23.000 0.375 NA   NA
 7691392 7691393 HELPY_1131 HELPY_1132 hopL proC TRUE 0.916 13.000 0.057 NA   NA
 7691393 7691394 HELPY_1132 HELPY_1133 proC   TRUE 0.865 27.000 0.151 1.000 N NA
 7691395 7691396 HELPY_1134 HELPY_1135   fldA FALSE 0.350 54.000 0.007 NA   NA
 7691396 7691397 HELPY_1135 HELPY_1136 fldA   TRUE 0.483 92.000 0.281 NA   NA
 7691398 7691399 HELPY_1137 HELPY_1138   trxB TRUE 0.781 26.000 0.043 NA N NA
 7691401 7691402 HELPY_1140 HELPY_1141 pgi hofH FALSE 0.040 306.000 0.000 1.000   NA
 7691404 7691405 HELPY_1143 HELPY_1144     TRUE 0.992 3.000 0.841 0.010 Y NA
 7691405 7691406 HELPY_1144 HELPY_1145     TRUE 0.983 2.000 0.773 1.000 Y NA
 7691406 7691407 HELPY_1145 HELPY_1146     TRUE 0.973 19.000 0.671 1.000 Y NA
 7691407 7691408 HELPY_1146 HELPY_1147     FALSE 0.272 122.000 0.098 NA   NA
 7691409 7691410 HELPY_1148 HELPY_1149     FALSE 0.241 129.000 0.048 1.000   NA
 7691410 7691411 HELPY_1149 HELPY_1150   hopQ FALSE 0.021 462.000 0.000 NA   NA
 7691411 7691412 HELPY_1150 HELPY_1151 hopQ deoD FALSE 0.017 821.000 0.000 NA   NA
 7691412 7691413 HELPY_1151 HELPY_1152 deoD deoB TRUE 0.949 -3.000 0.031 1.000 N NA
 7691413 7691414 HELPY_1152 HELPY_1153 deoB   TRUE 0.953 12.000 0.062 1.000 N NA
 7691414 7691415 HELPY_1153 HELPY_tRNA18     FALSE 0.136 105.000 0.000 NA   NA
 7691416 7691417 HELPY_1154 HELPY_1155     TRUE 0.843 21.000 0.029 NA N NA
 7691418 7691419 HELPY_1156 HELPY_1157     TRUE 0.813 26.000 0.039 1.000 N NA
 7691419 7691420 HELPY_1157 HELPY_1158     FALSE 0.177 161.000 0.041 NA N NA
 7691422 7691423 HELPY_1160 HELPY_1161   asd FALSE 0.023 412.000 0.000 NA   NA
 7691423 7691424 HELPY_1161 HELPY_1162 asd hisS TRUE 0.939 -13.000 0.011 0.041 N NA
 7691428 7691429 HELPY_1167 HELPY_1168 fusA rpsG TRUE 0.985 12.000 0.579 1.000 Y NA
 7691429 7691430 HELPY_1168 HELPY_1169 rpsG rpsL TRUE 0.990 16.000 0.620 0.006 Y NA
 7691430 7691431 HELPY_1169 HELPY_1170 rpsL rpoBC TRUE 0.528 89.000 0.122 1.000 N NA
 7691431 7691432 HELPY_1170 HELPY_1172 rpoBC rplL FALSE 0.094 223.000 0.008 1.000 N NA
 7691432 7691433 HELPY_1172 HELPY_1173 rplL rplJ TRUE 0.948 46.000 0.884 0.027 Y NA
 7691433 7691434 HELPY_1173 HELPY_1174 rplJ rplA TRUE 0.733 109.000 0.302 0.036 Y NA
 7691434 7691435 HELPY_1174 HELPY_1175 rplA rplK TRUE 0.945 45.000 0.838 0.036 Y NA
 7691435 7691436 HELPY_1175 HELPY_1176 rplK nusG TRUE 0.965 18.000 0.681 1.000 N NA
 7691436 7691437 HELPY_1176 HELPY_1177 nusG secE TRUE 0.922 27.000 0.843 1.000   NA
 7691437 7691438 HELPY_1177 HELPY_tRNA17 secE   FALSE 0.086 142.000 0.000 NA   NA
 7691438 7691439 HELPY_tRNA17 HELPY_1178   rpmG FALSE 0.421 40.000 0.000 NA   NA
 7691439 7691440 HELPY_1178 HELPY_1179 rpmG tuf TRUE 0.866 34.000 0.099 1.000 Y NA
 7691440 7691441 HELPY_1179 HELPY_tRNA16 tuf   FALSE 0.096 129.000 0.000 NA   NA
 7691441 7691442 HELPY_tRNA16 HELPY_tRNA15     TRUE 0.506 31.000 0.000 NA   NA
 7691442 7691443 HELPY_tRNA15 HELPY_tRNA14     TRUE 0.741 17.000 0.000 NA   NA
 7691443 7691444 HELPY_tRNA14 HELPY_tRNA13     TRUE 0.531 28.000 0.000 NA   NA
 7691446 7691447 HELPY_1181 HELPY_1182   hpyAIM FALSE 0.072 201.000 0.000 1.000   NA
 7691447 7691448 HELPY_1182 HELPY_1183 hpyAIM   TRUE 0.814 9.000 0.000 NA   NA
 7691448 7691449 HELPY_1183 HELPY_1184     TRUE 0.694 -40.000 0.000 NA   NA
 7691449 7691450 HELPY_1184 HELPY_1185     TRUE 0.731 -21.000 0.000 NA   NA
 7691450 7691451 HELPY_1185 HELPY_1186   cysE FALSE 0.186 85.000 0.000 NA   NA
 7691451 7691452 HELPY_1186 HELPY_tRNA12 cysE   FALSE 0.030 297.000 0.000 NA   NA
 7691452 7691453 HELPY_tRNA12 HELPY_tRNA11     FALSE 0.303 54.000 0.000 NA   NA
 7691453 7691454 HELPY_tRNA11 HELPY_1188   atpE FALSE 0.211 75.000 0.000 NA   NA
 7691454 7691455 HELPY_1188 HELPY_1189 atpE pnp FALSE 0.170 133.000 0.016 1.000   NA
 7691455 7691456 HELPY_1189 HELPY_1190 pnp   TRUE 0.873 3.000 0.028 NA   NA
 7691456 7691457 HELPY_1190 HELPY_1191   imp TRUE 0.935 14.000 0.165 NA   NA
 7691457 7691458 HELPY_1191 HELPY_1193 imp   TRUE 0.922 3.000 0.116 NA   NA
 7691458 7691459 HELPY_1193 HELPY_1194   purD FALSE 0.425 49.000 0.013 NA   NA
 7691459 7691460 HELPY_1194 HELPY_1195 purD   FALSE 0.090 313.000 0.000 0.090 N NA
 7691460 7691461 HELPY_1195 HELPY_1196   uppS TRUE 0.917 -6.000 0.008 1.000 N NA
 7691461 7691462 HELPY_1196 HELPY_1197 uppS   TRUE 0.617 40.000 0.008 1.000 N NA
 7691463 7691464 HELPY_1198 HELPY_1199   hemD TRUE 0.915 3.000 0.026 1.000 N NA
 7691464 7691465 HELPY_1199 HELPY_1200 hemD crcB TRUE 0.657 48.000 0.051 1.000 N NA
 7691467 7691468 HELPY_1202 HELPY_1203     FALSE 0.179 161.000 0.019 1.000 N NA
 7691468 7691469 HELPY_1203 HELPY_1204   lysC TRUE 0.933 2.000 0.051 1.000 N NA
 7691469 7691470 HELPY_1204 HELPY_1205 lysC hobA TRUE 0.933 -3.000 0.050 NA   NA
 7691470 7691471 HELPY_1205 HELPY_1206 hobA holB TRUE 0.934 -3.000 0.053 NA   NA
 7691471 7691472 HELPY_1206 HELPY_1207 holB folP TRUE 0.948 -3.000 0.054 1.000   NA
 7691474 7691475 HELPY_1209 HELPY_1210     TRUE 0.935 4.000 0.211 NA   NA
 7691475 7691476 HELPY_1210 HELPY_1211     TRUE 0.484 79.000 0.174 NA   NA
 7691476 7691477 HELPY_1211 HELPY_1212   carA TRUE 0.918 0.000 0.041 NA   NA
 7691477 7691478 HELPY_1212 HELPY_1213 carA amiF FALSE 0.116 166.000 0.008 1.000   NA
 7691479 7691480 HELPY_1214 HELPY_1215     FALSE 0.144 114.000 0.008 NA   NA
 7691480 7691481 HELPY_1215 HELPY_1216   alaS TRUE 0.880 2.000 0.015 NA N NA
 7691483 7691484 HELPY_1218 HELPY_1219     TRUE 0.835 11.000 0.000 NA   NA
 7691484 7691485 HELPY_1219 HELPY_1220   rpsR FALSE 0.019 514.000 0.000 NA   NA
 7691485 7691486 HELPY_1220 HELPY_1221 rpsR ssb TRUE 0.849 23.000 0.034 1.000 N NA
 7691486 7691487 HELPY_1221 HELPY_1222 ssb rpsF TRUE 0.941 10.000 0.033 1.000 N NA
 7691487 7691488 HELPY_1222 HELPY_1223 rpsF holA FALSE 0.068 345.000 0.020 1.000 N NA
 7691488 7691489 HELPY_1223 HELPY_1224 holA rnr TRUE 0.918 -10.000 0.024 1.000 N NA
 7691489 7691490 HELPY_1224 HELPY_1225 rnr aroE TRUE 0.935 0.000 0.020 1.000 N NA
 7691490 7691491 HELPY_1225 HELPY_1226 aroE   TRUE 0.869 8.000 0.018 NA   NA
 7691491 7691492 HELPY_1226 HELPY_1227     TRUE 0.967 9.000 0.667 NA   NA
 7691492 7691493 HELPY_1227 HELPY_1228     TRUE 0.988 -3.000 0.500 0.021   NA
 7691493 7691494 HELPY_1228 HELPY_1229   trpS TRUE 0.899 1.000 0.007 1.000 N NA
 7691494 7691495 HELPY_1229 HELPY_1230 trpS bioC FALSE 0.384 71.000 0.016 1.000   NA
 7691496 7691497 HELPY_1231 HELPY_1232 secG frr TRUE 0.919 0.000 0.008 1.000 N NA
 7691497 7691498 HELPY_1232 HELPY_1233 frr pyrE TRUE 0.916 4.000 0.026 1.000 N NA
 7691498 7691499 HELPY_1233 HELPY_1234 pyrE   TRUE 0.914 -10.000 0.071 NA   NA
 7691499 7691500 HELPY_1234 HELPY_1235     TRUE 0.942 -3.000 0.070 NA   NA
 7691500 7691501 HELPY_1235 HELPY_1236   nuoA FALSE 0.382 108.000 0.061 1.000 N NA
 7691501 7691502 HELPY_1236 HELPY_1237 nuoA nuoB TRUE 0.994 0.000 0.571 0.004 Y NA
 7691502 7691503 HELPY_1237 HELPY_1238 nuoB nuoC TRUE 0.994 0.000 0.703 0.004 Y NA
 7691503 7691504 HELPY_1238 HELPY_1239 nuoC nuoD TRUE 0.990 2.000 0.650 0.010 Y NA
 7691504 7691505 HELPY_1239 HELPY_1240 nuoD nuoE TRUE 0.990 -3.000 0.650 0.010   NA
 7691505 7691506 HELPY_1240 HELPY_1241 nuoE nuoF TRUE 0.974 3.000 0.214 0.010   NA
 7691506 7691507 HELPY_1241 HELPY_1242 nuoF nuoG TRUE 0.984 -3.000 0.222 0.010   NA
 7691507 7691508 HELPY_1242 HELPY_1243 nuoG nuoH TRUE 0.987 -3.000 0.065 0.010 Y NA
 7691508 7691509 HELPY_1243 HELPY_1244 nuoH nuoI TRUE 0.992 11.000 0.500 0.010 Y NA
 7691509 7691510 HELPY_1244 HELPY_1245 nuoI nuoJ TRUE 0.991 -7.000 0.442 0.010 Y NA
 7691510 7691511 HELPY_1245 HELPY_1246 nuoJ nuoK TRUE 0.988 -3.000 0.064 0.004 Y NA
 7691511 7691512 HELPY_1246 HELPY_1247 nuoK nuoL TRUE 0.978 3.000 0.056 0.010 Y NA
 7691512 7691513 HELPY_1247 HELPY_1248 nuoL nuoM TRUE 0.981 4.000 0.056 0.002 Y NA
 7691513 7691514 HELPY_1248 HELPY_1249 nuoM nuoN TRUE 0.988 -13.000 0.389 0.002 Y NA
 7691514 7691515 HELPY_1249 HELPY_1250 nuoN   TRUE 0.968 -10.000 0.586 1.000   NA
 7691515 7691516 HELPY_1250 HELPY_1252     TRUE 0.902 2.000 0.030 1.000   NA
 7691516 7691517 HELPY_1252 HELPY_1253     FALSE 0.037 293.000 0.007 NA   NA
 7691518 7691519 HELPY_1254 HELPY_1255 trpA trpB TRUE 0.996 -3.000 0.947 0.001 Y NA
 7691519 7691520 HELPY_1255 HELPY_1256 trpB trpCF TRUE 0.989 1.000 0.221 0.002 Y NA
 7691520 7691521 HELPY_1256 HELPY_1257 trpCF trpD TRUE 0.978 -7.000 0.293 1.000 Y NA
 7691521 7691522 HELPY_1257 HELPY_1258 trpD trpG TRUE 0.975 -3.000 0.083 1.000 Y NA
 7691522 7691523 HELPY_1258 HELPY_1259 trpG trpE TRUE 0.995 -3.000 0.703 0.002 Y NA
 7691523 7691524 HELPY_1259 HELPY_1260 trpE   FALSE 0.098 234.000 0.016 1.000 N NA
 7691524 7691525 HELPY_1260 HELPY_1261     TRUE 0.524 68.000 0.068 1.000   NA
 7691528 7691529 HELPY_1264 HELPY_1265 coaX   FALSE 0.421 40.000 0.000 NA   NA
 7691529 7691530 HELPY_1265 HELPY_misc_RNA_1     FALSE 0.171 92.000 0.000 NA   NA
 7691530 7691531 HELPY_misc_RNA_1 HELPY_1266     TRUE 0.785 2.000 0.000 NA   NA
 7691531 7691532 HELPY_1266 HELPY_1267     TRUE 0.962 -3.000 0.021 1.000 Y NA
 7691533 7691534 HELPY_1269 HELPY_1270 rplQ rpoA TRUE 0.985 0.000 0.873 1.000 N NA
 7691534 7691535 HELPY_1270 HELPY_1271 rpoA rpsD TRUE 0.978 12.000 0.549 1.000 N NA
 7691535 7691536 HELPY_1271 HELPY_1272 rpsD rpsK TRUE 0.991 10.000 0.509 0.036 Y NA
 7691536 7691537 HELPY_1272 HELPY_1273 rpsK rpsM TRUE 0.982 23.000 0.810 0.027 Y NA
 7691537 7691538 HELPY_1273 HELPY_CDS1274156R rpsM rpmJ TRUE 0.972 4.000 0.194 0.027   NA
 7691538 7691539 HELPY_CDS1274156R HELPY_1274 rpmJ infA TRUE 0.505 78.000 0.104 1.000   NA
 7691539 7691540 HELPY_1274 HELPY_1275 infA map TRUE 0.967 0.000 0.051 1.000 Y NA
 7691540 7691541 HELPY_1275 HELPY_1276 map secY TRUE 0.940 0.000 0.026 1.000 N NA
 7691541 7691542 HELPY_1276 HELPY_1277 secY rplO TRUE 0.887 40.000 0.730 1.000 N NA
 7691542 7691543 HELPY_1277 HELPY_1278 rplO rpsE TRUE 0.972 20.000 0.148 0.036 Y NA
 7691543 7691544 HELPY_1278 HELPY_1279 rpsE rplR TRUE 0.994 -3.000 0.814 0.036 Y NA
 7691544 7691545 HELPY_1279 HELPY_1280 rplR rplF TRUE 0.994 11.000 0.815 0.027 Y NA
 7691545 7691546 HELPY_1280 HELPY_1281 rplF rpsH TRUE 0.994 11.000 0.808 0.027 Y NA
 7691546 7691547 HELPY_1281 HELPY_CDS1278829R rpsH rpsN TRUE 0.991 10.000 0.473 0.027 Y NA
 7691547 7691548 HELPY_CDS1278829R HELPY_1282 rpsN rplE TRUE 0.991 10.000 0.496 0.027 Y NA
 7691548 7691549 HELPY_1282 HELPY_1283 rplE rplX TRUE 0.992 13.000 0.758 0.027 Y NA
 7691549 7691550 HELPY_1283 HELPY_1284 rplX rplN TRUE 0.994 0.000 0.810 0.036 Y NA
 7691550 7691551 HELPY_1284 HELPY_1285 rplN rpsQ TRUE 0.991 3.000 0.791 0.036 Y NA
 7691551 7691552 HELPY_1285 HELPY_1286 rpsQ rpmC TRUE 0.992 14.000 0.828 0.027 Y NA
 7691552 7691553 HELPY_1286 HELPY_1287 rpmC rplP TRUE 0.988 -25.000 0.802 0.027 Y NA
 7691553 7691554 HELPY_1287 HELPY_1289 rplP rpsC TRUE 0.991 3.000 0.828 0.036 Y NA
 7691554 7691555 HELPY_1289 HELPY_1290 rpsC rplV TRUE 0.990 4.000 0.719 0.036 Y NA
 7691555 7691556 HELPY_1290 HELPY_1291 rplV rpsS TRUE 0.993 10.000 0.769 0.036 Y NA
 7691556 7691557 HELPY_1291 HELPY_1292 rpsS rplB TRUE 0.993 12.000 0.820 0.036 Y NA
 7691557 7691558 HELPY_1292 HELPY_1293 rplB rplW TRUE 0.983 16.000 0.849 1.000 Y NA
 7691558 7691559 HELPY_1293 HELPY_1294 rplW rplD TRUE 0.979 4.000 0.513 1.000 Y NA
 7691559 7691560 HELPY_1294 HELPY_1295 rplD rplC TRUE 0.948 35.000 0.361 0.027 Y NA
 7691560 7691561 HELPY_1295 HELPY_1296 rplC rpsJ TRUE 0.948 37.000 0.467 0.036 Y NA
 7691562 7691563 HELPY_1297 HELPY_1298     FALSE 0.034 266.000 0.000 NA   NA
 7691564 7691565 HELPY_1299 HELPY_1300 rnhB   TRUE 0.555 31.000 0.007 NA   NA
 7691565 7691566 HELPY_1300 HELPY_1301   fumC TRUE 0.703 23.000 0.010 NA   NA
 7691567 7691568 HELPY_1302 HELPY_1303     TRUE 0.961 5.000 0.625 NA   NA
 7691568 7691569 HELPY_1303 HELPY_1304     TRUE 0.985 -3.000 0.562 NA Y NA
 7691569 7691570 HELPY_1304 HELPY_1305     TRUE 0.968 1.000 0.526 NA N NA
 7691571 7691572 HELPY_1306 HELPY_1307     TRUE 0.987 -6.000 0.915 NA Y NA
 7691572 7691573 HELPY_1307 HELPY_1308   dnaJ2 TRUE 0.928 11.000 0.014 1.000 N NA
 7691577 7691578 HELPY_1312 HELPY_1313   nikR TRUE 0.919 -7.000 0.014 1.000 N NA
 7691579 7691580 HELPY_1314 HELPY_1315 exbB2 exbD2 TRUE 0.995 -3.000 0.815 0.028 Y NA
 7691580 7691581 HELPY_1315 HELPY_1316 exbD2 tonB2 TRUE 0.970 -34.000 0.407 0.062 N NA
 7691581 7691582 HELPY_1316 HELPY_1317 tonB2 hopM FALSE 0.206 195.000 0.273 NA   NA
 7691583 7691584 HELPY_1318 HELPY_1320   corA TRUE 0.968 7.000 0.134 1.000 Y NA
 7691584 7691585 HELPY_1320 HELPY_1321 corA pgk TRUE 0.884 16.000 0.011 1.000 N NA
 7691585 7691586 HELPY_1321 HELPY_1322 pgk   TRUE 0.969 16.000 0.020 0.005 Y NA
 7691586 7691587 HELPY_1322 HELPY_1323   ung TRUE 0.525 82.000 0.088 1.000 N NA
 7691587 7691588 HELPY_1323 HELPY_1324 ung   TRUE 0.965 -3.000 0.088 1.000 N NA
 7691588 7691589 HELPY_1324 HELPY_1325     TRUE 0.965 -13.000 0.846 NA   NA
 7691589 7691590 HELPY_1325 HELPY_1326     FALSE 0.368 63.000 0.017 NA   NA
 7691590 7691591 HELPY_1326 HELPY_1327     FALSE 0.158 95.000 0.000 NA   NA
 7691592 7691593 HELPY_1328 HELPY_1329     FALSE 0.126 110.000 0.000 NA   NA
 7691595 7691596 HELPY_1331 HELPY_1332     TRUE 0.950 2.000 0.400 NA   NA
 7691596 7691597 HELPY_1332 HELPY_1333     TRUE 0.974 -3.000 0.400 NA N NA
 7691597 7691598 HELPY_1333 HELPY_1334     TRUE 0.971 -13.000 0.500 NA Y NA
 7691600 7691601 HELPY_1337 HELPY_1338     FALSE 0.152 99.000 0.000 NA   NA
 7691602 7691603 HELPY_1339 HELPY_1340   hypAIVR FALSE 0.367 44.000 0.000 NA   NA
 7691603 7691604 HELPY_1340 HELPY_1341 hypAIVR hpyAIVM TRUE 0.965 0.000 0.042 0.048   NA
 7691604 7691605 HELPY_1341 HELPY_1342 hpyAIVM   FALSE 0.110 120.000 0.000 NA   NA
 7691605 7691606 HELPY_1342 HELPY_1343     FALSE 0.321 51.000 0.000 NA   NA
 7691606 7691607 HELPY_1343 HELPY_1344     TRUE 0.668 -130.000 0.000 NA   NA
 7691607 7691608 HELPY_1344 HELPY_1345   nadC TRUE 0.605 24.000 0.000 NA   NA
 7691608 7691609 HELPY_1345 HELPY_1346 nadC nadA TRUE 0.990 0.000 0.198 0.004 Y NA
 7691609 7691610 HELPY_1346 HELPY_1347 nadA psd TRUE 0.911 -10.000 0.018 1.000 N NA
 7691610 7691611 HELPY_1347 HELPY_1348 psd   TRUE 0.947 -6.000 0.079 1.000   NA
 7691611 7691612 HELPY_1348 HELPY_1349     TRUE 0.969 13.000 0.727 NA   NA
 7691612 7691613 HELPY_1349 HELPY_1350   ubiA TRUE 0.905 -7.000 0.038 NA   NA
 7691613 7691614 HELPY_1350 HELPY_1351 ubiA   TRUE 0.606 27.000 0.009 NA   NA
 7691614 7691615 HELPY_1351 HELPY_1352   dnaB FALSE 0.297 81.000 0.023 NA   NA
 7691615 7691616 HELPY_1352 HELPY_1353 dnaB   TRUE 0.901 11.000 0.010 NA N NA
 7691616 7691617 HELPY_1353 HELPY_1354     TRUE 0.867 3.000 0.010 NA N NA
 7691617 7691618 HELPY_1354 HELPY_1355     TRUE 0.885 50.000 0.769 1.000 Y NA
 7691619 7691620 HELPY_1356 HELPY_1357     TRUE 0.789 6.000 0.000 NA   NA
 7691620 7691621 HELPY_1357 HELPY_1358     TRUE 0.835 11.000 0.000 NA   NA
 7691622 7691623 HELPY_1359 HELPY_1360 mreC mreB TRUE 0.974 4.000 0.689 1.000 N NA
 7691623 7691624 HELPY_1360 HELPY_1361 mreB clpX TRUE 0.787 42.000 0.034 0.087 N NA
 7691624 7691625 HELPY_1361 HELPY_1362 clpX lpxA TRUE 0.885 2.000 0.006 1.000 N NA
 7691625 7691626 HELPY_1362 HELPY_1363 lpxA fabZ TRUE 0.901 3.000 0.013 1.000 N NA
 7691626 7691627 HELPY_1363 HELPY_1364 fabZ   FALSE 0.097 182.000 0.017 NA   NA
 7691628 7691629 HELPY_1365 HELPY_1366   lon TRUE 0.610 43.000 0.062 NA   NA
 7691629 7691630 HELPY_1366 HELPY_1367 lon tyrA TRUE 0.934 -3.000 0.011 1.000 N NA
 7691630 7691631 HELPY_1367 HELPY_1368 tyrA   TRUE 0.507 36.000 0.003 NA   NA
 7691632 7691633 HELPY_1369 HELPY_1370     FALSE 0.153 271.000 0.130 1.000 N NA
 7691633 7691634 HELPY_1370 HELPY_1371     TRUE 0.936 -6.000 0.000 0.047   NA
 7691635 7691636 HELPY_1372 HELPY_1373 bioB rbn TRUE 0.916 0.000 0.017 1.000   NA
 7691637 7691638 HELPY_5S_1 HELPY_23S_1     FALSE 0.042 228.000 0.000 NA   NA
 7691639 7691640 HELPY_1376 HELPY_1378     FALSE 0.017 659.000 0.000 NA   NA
 7691640 7691641 HELPY_1378 HELPY_1379     TRUE 0.719 -25.000 0.000 NA   NA
 7691641 7691642 HELPY_1379 HELPY_1380     FALSE 0.086 142.000 0.000 NA   NA
 7691644 7691645 HELPY_1382 HELPY_1383   miaA FALSE 0.185 101.000 0.009 NA   NA
 7691645 7691646 HELPY_1383 HELPY_1384 miaA   TRUE 0.922 1.000 0.021 1.000 N NA
 7691646 7691647 HELPY_1384 HELPY_1385     TRUE 0.830 10.000 0.000 NA   NA
 7691647 7691648 HELPY_1385 HELPY_1386     TRUE 0.740 -18.000 0.000 NA   NA
 7691649 7691650 HELPY_1387 HELPY_1388 murB fliQ TRUE 0.939 4.000 0.066 1.000 N NA
 7691650 7691651 HELPY_1388 HELPY_1389 fliQ fliI TRUE 0.976 11.000 0.145 1.000 Y NA
 7691651 7691652 HELPY_1389 HELPY_1390 fliI   TRUE 0.984 1.000 0.216 0.086 Y NA
 7691652 7691653 HELPY_1390 HELPY_1391   ileS TRUE 0.969 17.000 0.242 0.086 N NA
 7691653 7691654 HELPY_1391 HELPY_1392 ileS   TRUE 0.843 25.000 0.013 1.000 Y NA
 7691656 7691657 HELPY_1394 HELPY_1395     TRUE 0.740 -18.000 0.000 NA   NA
 7691657 7691658 HELPY_1395 HELPY_1396     FALSE 0.031 291.000 0.000 NA   NA
 7691658 7691659 HELPY_1396 HELPY_1397     FALSE 0.059 207.000 0.004 NA   NA
 7691659 7691660 HELPY_1397 HELPY_1398     TRUE 0.913 -3.000 0.009 1.000   NA
 7691660 7691661 HELPY_1398 HELPY_1399   rnjA TRUE 0.951 -10.000 0.222 1.000   NA
 7691661 7691662 HELPY_1399 HELPY_1400 rnjA ksgA TRUE 0.658 38.000 0.028 1.000   NA
 7691664 7691665 HELPY_1402 HELPY_1403   purU TRUE 0.530 42.000 0.000 1.000 N NA
 7691665 7691666 HELPY_1403 HELPY_1404 purU sppA TRUE 0.917 3.000 0.028 1.000 N NA
 7691667 7691668 HELPY_1405 HELPY_1406     FALSE 0.037 251.000 0.000 NA   NA
 7691668 7691669 HELPY_1406 HELPY_1407     TRUE 0.835 11.000 0.000 NA   NA
 7691669 7691670 HELPY_1407 HELPY_1408     TRUE 0.830 10.000 0.000 NA   NA
 7691671 7691672 HELPY_16S_1 HELPY_1411     FALSE 0.020 505.000 0.000 NA   NA
 7691673 7691674 HELPY_1412 HELPY_1413 ppiB csrA TRUE 0.908 19.000 0.060 1.000 N NA
 7691674 7691675 HELPY_1413 HELPY_1414 csrA ispE TRUE 0.952 -3.000 0.036 1.000 N NA
 7691675 7691676 HELPY_1414 HELPY_1415 ispE smpB TRUE 0.947 -3.000 0.028 1.000 N NA
 7691676 7691677 HELPY_1415 HELPY_1416 smpB exbD3 TRUE 0.905 6.000 0.014 1.000 N NA
 7691677 7691678 HELPY_1416 HELPY_1417 exbD3 exbB3 TRUE 0.991 11.000 0.452 0.027 Y NA
 7691678 7691679 HELPY_1417 HELPY_CDS1399748D exbB3 rpmH FALSE 0.320 72.000 0.005 1.000   NA
 7691679 7691680 HELPY_CDS1399748D HELPY_1418 rpmH rnpA TRUE 0.956 -40.000 0.787 1.000   NA
 7691680 7691681 HELPY_1418 HELPY_1419 rnpA   TRUE 0.953 -13.000 0.540 NA   NA
 7691681 7691682 HELPY_1419 HELPY_1420     TRUE 0.954 6.000 0.461 NA   NA
 7691682 7691683 HELPY_1420 HELPY_1421     TRUE 0.930 0.000 0.061 NA   NA
 7691683 7691684 HELPY_1421 HELPY_1422   thdF TRUE 0.913 -7.000 0.049 NA   NA
 7691684 7691685 HELPY_1422 HELPY_1423 thdF homD FALSE 0.054 200.000 0.000 NA   NA
 7691686 7691687 HELPY_1424 HELPY_1425     FALSE 0.024 378.000 0.000 NA   NA
 7691687 7691688 HELPY_1425 HELPY_1426     TRUE 0.977 10.000 0.889 NA   NA
 7691688 7691689 HELPY_1426 HELPY_1427   lpp20 TRUE 0.974 8.000 1.000 NA   NA
 7691689 7691690 HELPY_1427 HELPY_1428 lpp20   TRUE 0.801 24.000 0.063 NA   NA
 7691690 7691691 HELPY_1428 HELPY_1429   trx2 FALSE 0.025 360.000 0.000 NA   NA
 7691691 7691692 HELPY_1429 HELPY_1430 trx2 rluB TRUE 0.710 56.000 0.206 1.000 N NA
 7691692 7691693 HELPY_1430 HELPY_1431 rluB dnaE TRUE 0.933 -3.000 0.010 1.000 N NA
 7691695 7691696 HELPY_1434 HELPY_1435     TRUE 0.955 12.000 0.250 NA   NA
 7691696 7691697 HELPY_1435 HELPY_1436     TRUE 0.940 3.000 0.258 NA   NA
 7691697 7691698 HELPY_1436 HELPY_1437     TRUE 0.978 -15.000 0.912 NA Y NA
 7691698 7691699 HELPY_1437 HELPY_1438     TRUE 0.989 -3.000 0.912 NA Y NA
 7691701 7691702 HELPY_1440 HELPY_1441 ilvE horJ TRUE 0.540 52.000 0.060 NA   NA
 7691702 7691703 HELPY_1441 HELPY_1442 horJ polA FALSE 0.142 115.000 0.008 NA   NA
 7691703 7691704 HELPY_1442 HELPY_1443 polA   FALSE 0.254 66.000 0.000 NA   NA
 7691704 7691705 HELPY_1443 HELPY_1444     TRUE 0.538 27.000 0.000 NA   NA
 7691705 7691706 HELPY_1444 HELPY_1445     TRUE 0.854 -3.000 0.000 NA   NA
 7691706 7691707 HELPY_1445 HELPY_1446     TRUE 0.485 33.000 0.000 NA   NA
 7691707 7691708 HELPY_1446 HELPY_1447   tmK TRUE 0.844 -12.000 0.014 NA   NA
 7691708 7691709 HELPY_1447 HELPY_1448 tmK kdtB TRUE 0.924 2.000 0.034 1.000 N NA
 7691709 7691710 HELPY_1448 HELPY_1449 kdtB   TRUE 0.962 0.000 0.032 1.000 Y NA
 7691710 7691711 HELPY_1449 HELPY_1450     TRUE 0.958 10.000 0.191 NA N NA
 7691711 7691712 HELPY_1450 HELPY_1451   uvrD TRUE 0.940 -3.000 0.036 NA N NA
 7691712 7691713 HELPY_1451 HELPY_1452 uvrD   TRUE 0.916 0.000 0.017 1.000   NA
 7691713 7691714 HELPY_1452 HELPY_1453   serS TRUE 0.889 10.000 0.005 1.000   NA
 7691714 7691715 HELPY_1453 HELPY_1454 serS   TRUE 0.885 1.000 0.010 1.000   NA
 7691715 7691716 HELPY_1454 HELPY_1455     TRUE 0.904 4.000 0.032 1.000   NA
 7691716 7691717 HELPY_1455 HELPY_1456   ubiE TRUE 0.914 10.000 0.008 1.000 N NA
 7691717 7691718 HELPY_1456 HELPY_1457 ubiE   TRUE 0.868 10.000 0.009 NA   NA
 7691718 7691719 HELPY_1457 HELPY_1458     TRUE 0.900 11.000 0.024 NA   NA
 7691719 7691720 HELPY_1458 HELPY_1459     TRUE 0.854 -13.000 0.024 NA   NA
 7691720 7691721 HELPY_1459 HELPY_1460     TRUE 0.977 -3.000 0.743 NA   NA
 7691721 7691722 HELPY_1460 HELPY_1461     TRUE 0.973 12.000 0.729 NA   NA
 7691722 7691723 HELPY_1461 HELPY_1462     TRUE 0.976 12.000 0.464 1.000 N NA
 7691723 7691724 HELPY_1462 HELPY_1463     TRUE 0.956 -3.000 0.082 1.000   NA
 7691724 7691725 HELPY_1463 HELPY_1464     FALSE 0.393 103.000 0.099 1.000   NA
 7691726 7691727 HELPY_1465 HELPY_1466     TRUE 0.952 12.000 0.107 1.000   NA
 7691727 7691728 HELPY_1466 HELPY_1467   murE TRUE 0.921 4.000 0.057 1.000   NA
 7691728 7691729 HELPY_1467 HELPY_1468 murE tal TRUE 0.949 4.000 0.016 0.038 N NA
 7691729 7691730 HELPY_1468 HELPY_1469 tal rplY TRUE 0.525 55.000 0.017 1.000 N NA
 7691730 7691731 HELPY_1469 HELPY_1470 rplY pth TRUE 0.991 10.000 0.496 0.039 Y NA
 7691731 7691732 HELPY_1470 HELPY_1471 pth   TRUE 0.925 10.000 0.031 1.000   NA
 7691732 7691733 HELPY_1471 HELPY_1472     FALSE 0.167 121.000 0.005 1.000   NA
 7691733 7691734 HELPY_1472 HELPY_1473     FALSE 0.206 77.000 0.000 NA   NA
 7691737 7691738 HELPY_1476 HELPY_1477 copA   TRUE 0.745 26.000 0.023 1.000   NA
 7691738 7691739 HELPY_1477 HELPY_1478   ribD TRUE 0.871 -18.000 0.026 1.000   NA
 7691739 7691740 HELPY_1478 HELPY_1479 ribD gltS TRUE 0.973 -3.000 0.219 1.000 N NA
 7691743 7691744 HELPY_1482 HELPY_1483   folB TRUE 0.958 -3.000 0.096 1.000   NA
 7691744 7691745 HELPY_1483 HELPY_1484 folB   TRUE 0.870 17.000 0.049 NA   NA
 7691745 7691746 HELPY_1484 HELPY_1485   frpB3 FALSE 0.441 154.000 1.000 NA   NA
 7691746 7691747 HELPY_1485 HELPY_1486 frpB3 selA FALSE 0.058 227.000 0.000 1.000   NA
 7691747 7691748 HELPY_1486 HELPY_1487 selA nusA FALSE 0.284 97.000 0.007 1.000 N NA
 7691749 7691750 HELPY_1488 HELPY_1489     TRUE 0.516 30.000 0.000 NA   NA
 7691750 7691751 HELPY_1489 HELPY_1490     TRUE 0.792 -10.000 0.000 NA   NA
 7691751 7691752 HELPY_1490 HELPY_1491     FALSE 0.018 584.000 0.000 NA   NA
 7691752 7691753 HELPY_1491 HELPY_1492   res FALSE 0.229 203.000 0.000 0.046 Y NA
 7691753 7691754 HELPY_1492 HELPY_1493 res mod TRUE 0.783 3.000 0.000 NA   NA
 7691754 7691755 HELPY_1493 HELPY_1494 mod mod TRUE 0.854 -3.000 0.000 NA   NA
 7691755 7691756 HELPY_1494 HELPY_1495 mod recG FALSE 0.360 45.000 0.000 NA   NA
 7691757 7691758 HELPY_1496 HELPY_1497     TRUE 0.971 4.000 1.000 NA   NA
 7691761 7691762 HELPY_1499 HELPY_1500 comH dnaA FALSE 0.041 229.000 0.000 NA   NA
 7691763 7691764 HELPY_1501 HELPY_1502     TRUE 0.692 43.000 0.172 NA   NA
 7691764 7691765 HELPY_1502 HELPY_1503   glmS TRUE 0.939 1.000 0.167 NA   NA
 7691765 7691766 HELPY_1503 HELPY_1504 glmS thyX TRUE 0.841 22.000 0.018 1.000 N NA
 7691766 7691767 HELPY_1504 HELPY_1505 thyX   FALSE 0.080 154.000 0.000 NA   NA
 7691768 7691769 HELPY_1506 HELPY_1507   hsdM3 TRUE 0.960 9.000 0.000 0.045 Y NA
 7691770 7691771 HELPY_1508 HELPY_1509 hsdR3   TRUE 0.965 0.000 0.411 NA   NA
 7691772 7691773 HELPY_1510 HELPY_1512 fecA3 rocF FALSE 0.033 534.000 0.000 1.000 N NA
 7691774 7691775 HELPY_1513 HELPY_1514 ald   FALSE 0.395 124.000 0.462 NA   NA
 7691777 7691778 HELPY_1516 HELPY_1517 ppnK recN TRUE 0.902 21.000 0.066 1.000 N NA
 7691778 7691779 HELPY_1517 HELPY_1518 recN   TRUE 0.939 -3.000 0.035 NA N NA
 7691779 7691780 HELPY_1518 HELPY_1519     TRUE 0.756 19.000 0.008 NA   NA
 7691780 7691781 HELPY_1519 HELPY_1520     FALSE 0.026 335.000 0.000 NA   NA
 7691781 7691782 HELPY_1520 HELPY_1521     TRUE 0.839 0.000 0.000 NA   NA
 7691782 7691783 HELPY_1521 HELPY_1522     TRUE 0.962 -3.000 0.250 NA   NA
 7691783 7691784 HELPY_1522 HELPY_1523     FALSE 0.211 75.000 0.000 NA   NA
 7691784 7691785 HELPY_1523 HELPY_1524     TRUE 0.766 -13.000 0.000 NA   NA
 7691785 7691786 HELPY_1524 HELPY_1525     TRUE 0.807 1.000 0.000 NA   NA
 7691786 7691787 HELPY_1525 HELPY_1527     FALSE 0.048 211.000 0.000 NA   NA
 7691787 7691788 HELPY_1527 HELPY_1528     TRUE 0.782 -12.000 0.000 NA   NA
 7691789 7691790 HELPY_1529 HELPY_1530     TRUE 0.971 -13.000 0.500 NA Y NA
 7691790 7691791 HELPY_1530 HELPY_1531     TRUE 0.974 -3.000 0.400 NA N NA
 7691791 7691792 HELPY_1531 HELPY_1532     TRUE 0.950 2.000 0.400 NA   NA
 7691793 7691794 HELPY_1533 HELPY_1534   hcpG FALSE 0.018 551.000 0.000 NA   NA
 7691795 7691796 HELPY_1535 HELPY_1536 dnaQ rpe TRUE 0.947 -22.000 0.279 1.000 N NA
 7691797 7691798 HELPY_1537 HELPY_1538 fbp   TRUE 0.975 0.000 0.778 NA   NA
 7691798 7691799 HELPY_1538 HELPY_1539     TRUE 0.948 13.000 0.241 NA   NA
 7691799 7691800 HELPY_1539 HELPY_1540     FALSE 0.165 303.000 0.625 NA   NA
 7691801 7691802 HELPY_1541 HELPY_1542 petC petB TRUE 0.990 -3.000 0.103 0.002 Y NA
 7691802 7691803 HELPY_1542 HELPY_1543 petB petA TRUE 0.988 11.000 0.093 0.002 Y NA
 7691803 7691804 HELPY_1543 HELPY_1544 petA mfd FALSE 0.179 135.000 0.008 1.000 N NA
 7691804 7691805 HELPY_1544 HELPY_1545 mfd   TRUE 0.891 4.000 0.023 NA N NA
 7691805 7691806 HELPY_1545 HELPY_1546   tagE1 TRUE 0.940 -81.000 0.244 NA Y NA
 7691806 7691807 HELPY_1546 HELPY_1547 tagE1 tagE2 TRUE 0.990 9.000 0.909 0.008   NA
 7691807 7691808 HELPY_1547 HELPY_1548 tagE2 folC TRUE 0.954 -3.000 0.071 1.000   NA
 7691808 7691809 HELPY_1548 HELPY_1549 folC   TRUE 0.918 -10.000 0.084 NA   NA
 7691809 7691810 HELPY_1549 HELPY_1550   leuS TRUE 0.920 -3.000 0.031 NA   NA
 7691810 7691811 HELPY_1550 HELPY_1551 leuS   TRUE 0.868 7.000 0.021 NA   NA
 7691811 7691812 HELPY_1551 HELPY_1552   secF TRUE 0.971 10.000 0.667 NA   NA
 7691812 7691813 HELPY_1552 HELPY_1553 secF secD TRUE 0.992 9.000 0.436 0.001 Y NA
 7691813 7691814 HELPY_1553 HELPY_1554 secD yajC TRUE 0.967 -3.000 0.068 NA Y NA
 7691814 7691815 HELPY_1554 HELPY_1555 yajC nhaA TRUE 0.471 48.000 0.009 NA N NA
 7691815 7691816 HELPY_1555 HELPY_1556 nhaA pcrA TRUE 0.924 -9.000 0.026 1.000 N NA
 7691817 7691818 HELPY_1557 HELPY_1558 rpsB tsf TRUE 0.988 0.000 0.748 1.000 Y NA
 7691819 7691820 HELPY_1559 HELPY_1560 pbp3 fliE FALSE 0.371 156.000 0.303 1.000 N NA
 7691820 7691821 HELPY_1560 HELPY_1561 fliE flgC TRUE 0.699 128.000 0.271 0.005 Y NA
 7691821 7691822 HELPY_1561 HELPY_1562 flgC flgB TRUE 0.994 13.000 0.804 0.005 Y NA
 7691825 7691826 HELPY_1565 HELPY_1566 tsaA metQ FALSE 0.154 146.000 0.016 NA N NA
 7691827 7691828 HELPY_1568 HELPY_1569 pbp2   TRUE 0.839 -19.000 0.027 NA   NA
 7691828 7691829 HELPY_1569 HELPY_1570   engB TRUE 0.857 13.000 0.010 NA   NA
 7691829 7691830 HELPY_1570 HELPY_1571 engB   TRUE 0.927 -3.000 0.041 NA   NA
 7691830 7691831 HELPY_1571 HELPY_1572     TRUE 0.917 0.000 0.038 NA   NA
 7691831 7691832 HELPY_1572 HELPY_1573   kdsC TRUE 0.936 -25.000 0.471 NA   NA
 7691832 7691833 HELPY_1573 HELPY_1574 kdsC   TRUE 0.928 -3.000 0.042 NA   NA
 7691833 7691834 HELPY_1574 HELPY_1575   mltD TRUE 0.931 0.000 0.062 NA   NA
 7691834 7691835 HELPY_1575 HELPY_1576 mltD   FALSE 0.251 89.000 0.015 NA   NA
 7691836 7691837 HELPY_1577 HELPY_1578 ribC   TRUE 0.880 1.000 0.009 1.000   NA
 7691837 7691838 HELPY_1578 HELPY_1579   abc TRUE 0.893 19.000 0.066 1.000   NA
 7691838 7691839 HELPY_1579 HELPY_1580 abc   TRUE 0.973 2.000 0.274 1.000 Y NA
 7691840 7691841 HELPY_1582 HELPY_1583     TRUE 0.742 49.000 0.500 NA   NA
 7691841 7691842 HELPY_1583 HELPY_1584     TRUE 0.972 10.000 0.700 NA   NA
 7691842 7691843 HELPY_1584 HELPY_1585   wecA TRUE 0.982 -3.000 0.538 1.000 N NA
 7691844 7691845 HELPY_1586 HELPY_1587 pdxJ   TRUE 0.981 2.000 0.048 0.001 Y NA
 7691845 7691846 HELPY_1587 HELPY_1588     FALSE 0.424 65.000 0.007 1.000 N NA
 7691846 7691847 HELPY_1588 HELPY_1589   flgG1 FALSE 0.125 177.000 0.004 1.000 N NA
 7691848 7691849 HELPY_1590 HELPY_1591     FALSE 0.022 428.000 0.000 NA   NA
 7691849 7691850 HELPY_1591 HELPY_1592     TRUE 0.619 85.000 0.714 NA   NA
 7691850 7691851 HELPY_1592 HELPY_1593     FALSE 0.036 260.000 0.000 NA   NA
 7691851 7690281 HELPY_1593 HELPY_0001   nusB FALSE 0.139 182.000 0.027 1.000   NA