MicrobesOnline Operon Predictions for Streptococcus suis SC84

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 7623219 7623220 SSUSC84_0001 SSUSC84_0002 dnaA dnaN TRUE 0.775 154.000 0.328 1.000 Y NA
 7623220 7623221 SSUSC84_0002 SSUSC84_0003 dnaN   FALSE 0.184 92.000 0.003 1.000 N NA
 7623221 7623222 SSUSC84_0003 SSUSC84_0004     TRUE 0.918 10.000 0.015 NA   NA
 7623222 7623223 SSUSC84_0004 SSUSC84_0005     FALSE 0.281 104.000 0.010 NA   NA
 7623223 7623224 SSUSC84_0005 SSUSC84_0006     FALSE 0.192 86.000 0.002 1.000 N NA
 7623224 7623225 SSUSC84_0006 SSUSC84_0007   pth TRUE 0.683 158.000 0.184 1.000 Y NA
 7623225 7623226 SSUSC84_0007 SSUSC84_0008 pth trcF TRUE 0.971 0.000 0.137 1.000 N NA
 7623226 7623227 SSUSC84_0008 SSUSC84_0009 trcF   TRUE 0.558 50.000 0.024 1.000 N NA
 7623227 7623228 SSUSC84_0009 SSUSC84_0010     TRUE 0.941 -13.000 0.053 1.000 N NA
 7623228 7623229 SSUSC84_0010 SSUSC84_0011     TRUE 0.916 -3.000 0.000 NA   NA
 7623229 7623230 SSUSC84_0011 SSUSC84_0012     TRUE 0.824 13.000 0.000 NA   NA
 7623230 7623231 SSUSC84_0012 SSUSC84_0013     TRUE 0.920 1.000 0.014 1.000 N NA
 7623231 7623232 SSUSC84_0013 SSUSC84_0014   hpt TRUE 0.928 8.000 0.067 0.069 N NA
 7623232 7623233 SSUSC84_0014 SSUSC84_0015 hpt ftsH TRUE 0.929 22.000 0.192 1.000 N NA
 7623233 7623234 SSUSC84_0015 SSUSC84_0016 ftsH comX FALSE 0.064 338.000 0.006 1.000   NA
 7623234 7623235 SSUSC84_0016 SSUSC84_r0001 comX   FALSE 0.023 540.000 0.000 NA   NA
 7623235 7623236 SSUSC84_r0001 SSUSC84_t0001     TRUE 0.437 52.000 0.000 NA   NA
 7623236 7623237 SSUSC84_t0001 SSUSC84_r0002     FALSE 0.051 280.000 0.000 NA   NA
 7623237 7623238 SSUSC84_r0002 SSUSC84_r0003     FALSE 0.225 78.000 0.000 NA   NA
 7623238 7623239 SSUSC84_r0003 SSUSC84_t0002     TRUE 0.903 1.000 0.000 NA   NA
 7623239 7623240 SSUSC84_t0002 SSUSC84_t0003     TRUE 0.880 3.000 0.000 NA   NA
 7623240 7623241 SSUSC84_t0003 SSUSC84_t0004     TRUE 0.522 46.000 0.000 NA   NA
 7623241 7623242 SSUSC84_t0004 SSUSC84_t0005     TRUE 0.867 4.000 0.000 NA   NA
 7623242 7623243 SSUSC84_t0005 SSUSC84_t0006     TRUE 0.816 15.000 0.000 NA   NA
 7623243 7623244 SSUSC84_t0006 SSUSC84_t0007     TRUE 0.824 13.000 0.000 NA   NA
 7623244 7623245 SSUSC84_t0007 SSUSC84_t0008     TRUE 0.845 8.000 0.000 NA   NA
 7623245 7623246 SSUSC84_t0008 SSUSC84_t0009     TRUE 0.781 19.000 0.000 NA   NA
 7623246 7623247 SSUSC84_t0009 SSUSC84_t0010     TRUE 0.493 48.000 0.000 NA   NA
 7623247 7623248 SSUSC84_t0010 SSUSC84_t0011     TRUE 0.824 13.000 0.000 NA   NA
 7623248 7623249 SSUSC84_t0011 SSUSC84_t0012     TRUE 0.806 17.000 0.000 NA   NA
 7623249 7623250 SSUSC84_t0012 SSUSC84_t0013     TRUE 0.849 7.000 0.000 NA   NA
 7623250 7623251 SSUSC84_t0013 SSUSC84_t0014     TRUE 0.838 11.000 0.000 NA   NA
 7623251 7623252 SSUSC84_t0014 SSUSC84_t0015     TRUE 0.811 16.000 0.000 NA   NA
 7623252 7623253 SSUSC84_t0015 SSUSC84_t0016     TRUE 0.663 32.000 0.000 NA   NA
 7623253 7623254 SSUSC84_t0016 SSUSC84_t0017     TRUE 0.824 13.000 0.000 NA   NA
 7623254 7623255 SSUSC84_t0017 SSUSC84_0017     FALSE 0.342 60.000 0.000 NA   NA
 7623255 7623256 SSUSC84_0017 SSUSC84_0018     TRUE 0.994 -10.000 0.550 0.005   NA
 7623256 7623257 SSUSC84_0018 SSUSC84_0019     TRUE 0.383 85.000 0.021 NA   NA
 7623257 7623258 SSUSC84_0019 SSUSC84_0020   prsA1 TRUE 0.466 103.000 0.107 NA   NA
 7623258 7623259 SSUSC84_0020 SSUSC84_0021 prsA1   TRUE 0.695 87.000 0.048 1.000 Y NA
 7623259 7623260 SSUSC84_0021 SSUSC84_0022   recO TRUE 0.910 -13.000 0.012 1.000 N NA
 7623260 7623261 SSUSC84_0022 SSUSC84_0023 recO plsX TRUE 0.926 -3.000 0.011 1.000 N NA
 7623261 7623262 SSUSC84_0023 SSUSC84_0024 plsX   TRUE 0.965 -7.000 0.017 0.009   NA
 7623262 7623263 SSUSC84_0024 SSUSC84_0025   purC FALSE 0.281 118.000 0.017 1.000   NA
 7623263 7623264 SSUSC84_0025 SSUSC84_0026 purC   TRUE 0.976 13.000 0.043 1.000 Y NA
 7623264 7623265 SSUSC84_0026 SSUSC84_0027   purF TRUE 0.982 3.000 0.024 1.000 Y NA
 7623265 7623266 SSUSC84_0027 SSUSC84_0028 purF purM TRUE 0.933 56.000 0.248 1.000 Y NA
 7623266 7623267 SSUSC84_0028 SSUSC84_0029 purM purN TRUE 0.996 -3.000 0.238 0.003 Y NA
 7623267 7623268 SSUSC84_0029 SSUSC84_0030 purN purH TRUE 0.991 10.000 0.225 1.000 Y NA
 7623268 7623269 SSUSC84_0030 SSUSC84_0031 purH purD TRUE 0.772 126.000 0.238 1.000 Y NA
 7623269 7623270 SSUSC84_0031 SSUSC84_0032 purD purE TRUE 0.953 26.000 0.044 1.000 Y NA
 7623270 7623271 SSUSC84_0032 SSUSC84_0033 purE purK TRUE 0.993 -13.000 0.136 0.002 Y NA
 7623271 7623272 SSUSC84_0033 SSUSC84_0034 purK   TRUE 0.548 44.000 0.000 NA   NA
 7623272 7623273 SSUSC84_0034 SSUSC84_0035     FALSE 0.248 73.000 0.000 NA   NA
 7623273 7623274 SSUSC84_0035 SSUSC84_0036   purB TRUE 0.895 2.000 0.000 NA   NA
 7623274 7623275 SSUSC84_0036 SSUSC84_0037 purB   FALSE 0.019 937.000 0.000 NA   NA
 7623275 7623276 SSUSC84_0037 SSUSC84_0038     TRUE 0.836 10.000 0.000 NA   NA
 7623276 7623277 SSUSC84_0038 SSUSC84_0039     TRUE 0.832 12.000 0.000 NA   NA
 7623277 7623278 SSUSC84_0039 SSUSC84_0040     TRUE 0.912 -7.000 0.000 NA   NA
 7623278 7623279 SSUSC84_0040 SSUSC84_0041     TRUE 0.855 6.000 0.000 NA   NA
 7623279 7623280 SSUSC84_0041 SSUSC84_0042     TRUE 0.880 3.000 0.000 NA   NA
 7623280 7623281 SSUSC84_0042 SSUSC84_0043   ruvB FALSE 0.010 570.000 0.000 1.000 N NA
 7623281 7623282 SSUSC84_0043 SSUSC84_0044 ruvB   TRUE 0.910 0.000 0.000 1.000   NA
 7623282 7623283 SSUSC84_0044 SSUSC84_0045     TRUE 0.908 2.000 0.000 0.064   NA
 7623283 7623284 SSUSC84_0045 SSUSC84_0046     FALSE 0.059 247.000 0.000 1.000   NA
 7623284 7623285 SSUSC84_0046 SSUSC84_0047     FALSE 0.028 405.000 0.000 1.000   NA
 7623286 7623287 SSUSC84_0048 SSUSC84_0049     FALSE 0.087 188.000 0.000 NA   NA
 7623288 7623289 SSUSC84_0050 SSUSC84_0051     TRUE 0.709 25.000 0.000 NA   NA
 7623289 7623290 SSUSC84_0051 SSUSC84_0052     TRUE 0.424 53.000 0.000 NA   NA
 7623290 7623291 SSUSC84_0052 SSUSC84_0053   mutL FALSE 0.147 118.000 0.000 NA   NA
 7623291 7623292 SSUSC84_0053 SSUSC84_0054 mutL ruvA TRUE 0.917 39.000 0.016 1.000 Y NA
 7623294 7623295 SSUSC84_0056 SSUSC84_0057 tag cinA TRUE 0.766 37.000 0.011 1.000   NA
 7623295 7623296 SSUSC84_0057 SSUSC84_0058 cinA recA TRUE 0.740 52.000 0.083 1.000   NA
 7623296 7623297 SSUSC84_0058 SSUSC84_0059 recA   FALSE 0.059 236.000 0.004 1.000 N NA
 7623297 7623298 SSUSC84_0059 SSUSC84_0060     TRUE 0.358 100.000 0.032 1.000   NA
 7623298 7623299 SSUSC84_0060 SSUSC84_0061     TRUE 0.994 0.000 0.537 1.000   NA
 7623299 7623300 SSUSC84_0061 SSUSC84_0062     TRUE 0.990 12.000 0.651 NA   NA
 7623300 7623301 SSUSC84_0062 SSUSC84_0063     FALSE 0.072 208.000 0.000 NA   NA
 7623301 7623302 SSUSC84_0063 SSUSC84_0064     FALSE 0.248 73.000 0.000 NA   NA
 7623302 7623303 SSUSC84_0064 SSUSC84_0065   rpsJ FALSE 0.040 324.000 0.000 NA   NA
 7623303 7623304 SSUSC84_0065 SSUSC84_0066 rpsJ rplC TRUE 0.896 97.000 0.467 0.042 Y NA
 7623304 7623305 SSUSC84_0066 SSUSC84_0067 rplC rplD TRUE 0.991 25.000 0.544 0.032 Y NA
 7623305 7623306 SSUSC84_0067 SSUSC84_0068 rplD rplW TRUE 0.996 0.000 0.307 0.032 Y NA
 7623306 7623307 SSUSC84_0068 SSUSC84_0069 rplW rplB TRUE 0.997 18.000 0.849 0.038 Y NA
 7623307 7623308 SSUSC84_0069 SSUSC84_0070 rplB rpsS TRUE 0.826 251.000 0.820 0.042 Y NA
 7623308 7623309 SSUSC84_0070 SSUSC84_0071 rpsS rplV TRUE 0.996 18.000 0.769 0.042 Y NA
 7623309 7623310 SSUSC84_0071 SSUSC84_0072 rplV rpsC TRUE 0.997 13.000 0.719 0.042 Y NA
 7623310 7623311 SSUSC84_0072 SSUSC84_0073 rpsC rplP TRUE 0.998 4.000 0.828 0.042 Y NA
 7623311 7623312 SSUSC84_0073 SSUSC84_0074 rplP rpmC TRUE 0.997 10.000 0.802 0.032 Y NA
 7623312 7623313 SSUSC84_0074 SSUSC84_0075 rpmC rpsQ TRUE 0.995 24.000 0.828 0.032 Y NA
 7623313 7623314 SSUSC84_0075 SSUSC84_0076 rpsQ rplN TRUE 0.994 25.000 0.791 0.042 Y NA
 7623314 7623315 SSUSC84_0076 SSUSC84_0077 rplN rplX TRUE 0.911 139.000 0.810 0.042 Y NA
 7623315 7623316 SSUSC84_0077 SSUSC84_0078 rplX rplE TRUE 0.994 24.000 0.758 0.032 Y NA
 7623316 7623317 SSUSC84_0078 SSUSC84_0079 rplE rpsN TRUE 0.995 15.000 0.496 0.032 Y NA
 7623317 7623318 SSUSC84_0079 SSUSC84_0080 rpsN   FALSE 0.131 131.000 0.000 NA   NA
 7623318 7623319 SSUSC84_0080 SSUSC84_0081   rpsH TRUE 0.632 36.000 0.000 NA   NA
 7623319 7623320 SSUSC84_0081 SSUSC84_0082 rpsH   FALSE 0.120 144.000 0.000 NA   NA
 7623320 7623321 SSUSC84_0082 SSUSC84_0083     TRUE 0.493 48.000 0.000 NA   NA
 7623321 7623322 SSUSC84_0083 SSUSC84_0084   rplF FALSE 0.206 87.000 0.000 NA   NA
 7623322 7623323 SSUSC84_0084 SSUSC84_0085 rplF rplR TRUE 0.950 89.000 0.815 0.032 Y NA
 7623323 7623324 SSUSC84_0085 SSUSC84_0086 rplR rpsE TRUE 0.996 19.000 0.814 0.042 Y NA
 7623324 7623325 SSUSC84_0086 SSUSC84_0087 rpsE rpmD TRUE 0.997 15.000 0.789 0.042 Y NA
 7623325 7623326 SSUSC84_0087 SSUSC84_0088 rpmD rplO TRUE 0.893 136.000 0.653 0.005 Y NA
 7623326 7623327 SSUSC84_0088 SSUSC84_0089 rplO secY TRUE 0.987 14.000 0.730 1.000 N NA
 7623327 7623328 SSUSC84_0089 SSUSC84_0090 secY adk TRUE 0.563 94.000 0.241 1.000 N NA
 7623328 7623329 SSUSC84_0090 SSUSC84_0091 adk infA FALSE 0.249 122.000 0.059 1.000 N NA
 7623329 7623330 SSUSC84_0091 SSUSC84_0092 infA rpmJ TRUE 0.960 25.000 0.067 1.000 Y NA
 7623330 7623331 SSUSC84_0092 SSUSC84_0093 rpmJ rpsM TRUE 0.975 20.000 0.086 0.032 Y NA
 7623331 7623332 SSUSC84_0093 SSUSC84_0094 rpsM rpsK TRUE 0.997 18.000 0.810 0.032 Y NA
 7623332 7623333 SSUSC84_0094 SSUSC84_0095 rpsK rpoA TRUE 0.885 45.000 0.308 1.000 N NA
 7623333 7623334 SSUSC84_0095 SSUSC84_0096 rpoA rplQ TRUE 0.990 15.000 0.873 1.000 N NA
 7623334 7623335 SSUSC84_0096 SSUSC84_r0004 rplQ   FALSE 0.020 651.000 0.000 NA   NA
 7623335 7623336 SSUSC84_r0004 SSUSC84_t0018     TRUE 0.437 52.000 0.000 NA   NA
 7623336 7623337 SSUSC84_t0018 SSUSC84_r0005     FALSE 0.051 280.000 0.000 NA   NA
 7623337 7623338 SSUSC84_r0005 SSUSC84_r0006     FALSE 0.225 78.000 0.000 NA   NA
 7623338 7623339 SSUSC84_r0006 SSUSC84_t0019     TRUE 0.880 3.000 0.000 NA   NA
 7623339 7623340 SSUSC84_t0019 SSUSC84_t0020     TRUE 0.855 6.000 0.000 NA   NA
 7623340 7623341 SSUSC84_t0020 SSUSC84_t0021     TRUE 0.670 31.000 0.000 NA   NA
 7623341 7623342 SSUSC84_t0021 SSUSC84_t0022     TRUE 0.849 7.000 0.000 NA   NA
 7623342 7623343 SSUSC84_t0022 SSUSC84_t0023     TRUE 0.840 9.000 0.000 NA   NA
 7623343 7623344 SSUSC84_t0023 SSUSC84_t0024     TRUE 0.836 10.000 0.000 NA   NA
 7623344 7623345 SSUSC84_t0024 SSUSC84_t0025     TRUE 0.811 16.000 0.000 NA   NA
 7623345 7623346 SSUSC84_t0025 SSUSC84_t0026     TRUE 0.758 21.000 0.000 NA   NA
 7623346 7623347 SSUSC84_t0026 SSUSC84_t0027     TRUE 0.845 8.000 0.000 NA   NA
 7623347 7623348 SSUSC84_t0027 SSUSC84_t0028     TRUE 0.845 8.000 0.000 NA   NA
 7623348 7623349 SSUSC84_t0028 SSUSC84_t0029     TRUE 0.832 12.000 0.000 NA   NA
 7623349 7623350 SSUSC84_t0029 SSUSC84_t0030     TRUE 0.832 12.000 0.000 NA   NA
 7623351 7623352 SSUSC84_0097 SSUSC84_0098     TRUE 0.995 -10.000 0.714 NA   NA
 7623352 7623353 SSUSC84_0098 SSUSC84_0099     TRUE 0.861 61.000 0.429 NA   NA
 7623353 7623354 SSUSC84_0099 SSUSC84_0100     TRUE 0.996 5.000 1.000 NA   NA
 7623354 7623355 SSUSC84_0100 SSUSC84_0101     FALSE 0.037 336.000 0.000 NA   NA
 7623355 7623356 SSUSC84_0101 SSUSC84_0102     TRUE 0.904 -10.000 0.000 NA   NA
 7623356 7623357 SSUSC84_0102 SSUSC84_0103     TRUE 0.405 55.000 0.000 NA   NA
 7623357 7623358 SSUSC84_0103 SSUSC84_0104     FALSE 0.095 179.000 0.000 NA   NA
 7623361 7623362 SSUSC84_0107 SSUSC84_0108     TRUE 0.984 1.000 0.192 1.000   NA
 7623362 7623363 SSUSC84_0108 SSUSC84_0109     TRUE 0.998 -7.000 0.673 1.000 Y NA
 7623363 7623364 SSUSC84_0109 SSUSC84_0110   adcA TRUE 0.985 10.000 0.111 1.000 Y NA
 7623364 7623365 SSUSC84_0110 SSUSC84_0111 adcA copY TRUE 0.537 85.000 0.188 1.000 N NA
 7623365 7623366 SSUSC84_0111 SSUSC84_0112 copY   TRUE 0.806 17.000 0.000 NA   NA
 7623366 7623367 SSUSC84_0112 SSUSC84_0113   copZ TRUE 0.916 -3.000 0.000 NA   NA
 7623368 7623369 SSUSC84_0114 SSUSC84_0115   tyrS TRUE 0.361 58.000 0.004 1.000 N NA
 7623372 7623373 SSUSC84_0117 SSUSC84_0118 rpoB rpoC TRUE 0.901 178.000 0.851 0.002 Y NA
 7623373 7623374 SSUSC84_0118 SSUSC84_0119 rpoC   FALSE 0.195 150.000 0.007 NA   NA
 7623376 7623377 SSUSC84_0121 SSUSC84_0122     TRUE 0.997 -79.000 0.639 1.000 Y NA
 7623377 7623378 SSUSC84_0122 SSUSC84_0123   comYC TRUE 0.999 2.000 0.861 0.001 Y NA
 7623378 7623379 SSUSC84_0123 SSUSC84_0124 comYC   TRUE 0.878 -19.000 0.000 NA   NA
 7623379 7623380 SSUSC84_0124 SSUSC84_0125     TRUE 0.868 -28.000 0.000 NA   NA
 7623380 7623381 SSUSC84_0125 SSUSC84_0126     TRUE 0.986 -13.000 0.250 NA   NA
 7623381 7623382 SSUSC84_0126 SSUSC84_0127     TRUE 0.982 -22.000 0.232 NA   NA
 7623382 7623383 SSUSC84_0127 SSUSC84_0128     TRUE 0.694 57.000 0.087 NA   NA
 7623383 7623384 SSUSC84_0128 SSUSC84_0129   ackA TRUE 0.738 50.000 0.130 1.000 N NA
 7623384 7623385 SSUSC84_0129 SSUSC84_0130 ackA   FALSE 0.041 315.000 0.000 NA   NA
 7623385 7623386 SSUSC84_0130 SSUSC84_0131   folC TRUE 0.390 56.000 0.000 NA   NA
 7623388 7623389 SSUSC84_0133 SSUSC84_0134     TRUE 0.982 -3.000 0.140 NA   NA
 7623389 7623390 SSUSC84_0134 SSUSC84_0135     TRUE 0.534 45.000 0.000 NA   NA
 7623390 7623391 SSUSC84_0135 SSUSC84_0136     TRUE 0.781 19.000 0.000 NA   NA
 7623395 7623396 SSUSC84_0140 SSUSC84_0141 groES groEL TRUE 0.988 11.000 0.160 1.000 Y NA
 7623396 7623397 SSUSC84_0141 SSUSC84_0142 groEL rpsL FALSE 0.029 232.000 0.000 1.000 N NA
 7623397 7623398 SSUSC84_0142 SSUSC84_0143 rpsL rpsG TRUE 0.990 17.000 0.224 0.006 Y NA
 7623398 7623399 SSUSC84_0143 SSUSC84_0144 rpsG fus TRUE 0.513 557.000 0.579 1.000 Y NA
 7623399 7623400 SSUSC84_0144 SSUSC84_0145 fus   FALSE 0.008 989.000 0.000 1.000 N NA
 7623400 7623401 SSUSC84_0145 SSUSC84_0146   plr FALSE 0.014 367.000 0.000 1.000 N NA
 7623401 7623402 SSUSC84_0146 SSUSC84_0147 plr pgk FALSE 0.218 256.000 0.000 0.007 Y NA
 7623402 7623403 SSUSC84_0147 SSUSC84_0148 pgk   FALSE 0.031 807.000 0.002 NA   NA
 7623403 7623404 SSUSC84_0148 SSUSC84_0149   glnR TRUE 0.632 76.000 0.154 NA   NA
 7623404 7623405 SSUSC84_0149 SSUSC84_0150 glnR glnA TRUE 0.898 29.000 0.179 1.000 N NA
 7623406 7623407 SSUSC84_0151 SSUSC84_0152     TRUE 0.991 4.000 0.576 NA   NA
 7623408 7623409 SSUSC84_0153 SSUSC84_0154     TRUE 0.987 -3.000 0.209 1.000   NA
 7623409 7623410 SSUSC84_0154 SSUSC84_0155     TRUE 0.960 -10.000 0.030 1.000   NA
 7623412 7623413 SSUSC84_0157 SSUSC84_0158     TRUE 0.975 69.000 1.000 0.037 Y NA
 7623413 7623414 SSUSC84_0158 SSUSC84_0159     TRUE 0.997 11.000 0.800 0.037 Y NA
 7623414 7623415 SSUSC84_0159 SSUSC84_0160     TRUE 0.983 10.000 0.095 1.000 Y NA
 7623415 7623416 SSUSC84_0160 SSUSC84_0161     FALSE 0.024 275.000 0.000 NA N NA
 7623416 7623417 SSUSC84_0161 SSUSC84_0162     TRUE 0.989 -13.000 0.338 NA   NA
 7623417 7623418 SSUSC84_0162 SSUSC84_0163     TRUE 0.836 10.000 0.000 NA   NA
 7623418 7623419 SSUSC84_0163 SSUSC84_0164   epf FALSE 0.025 463.000 0.000 NA   NA
 7623420 7623421 SSUSC84_0165 SSUSC84_0166     TRUE 0.983 10.000 0.385 NA   NA
 7623421 7623422 SSUSC84_0166 SSUSC84_0167     FALSE 0.035 356.000 0.000 1.000   NA
 7623423 7623424 SSUSC84_0168 SSUSC84_0169     FALSE 0.101 170.000 0.000 NA   NA
 7623424 7623425 SSUSC84_0169 SSUSC84_0170     FALSE 0.055 268.000 0.000 NA   NA
 7623425 7623426 SSUSC84_0170 SSUSC84_0171     TRUE 0.974 2.000 0.156 0.017 N NA
 7623426 7623427 SSUSC84_0171 SSUSC84_0172     TRUE 0.833 54.000 0.182 0.027   NA
 7623427 7623428 SSUSC84_0172 SSUSC84_0173     TRUE 0.989 2.000 0.333 1.000   NA
 7623428 7623429 SSUSC84_0173 SSUSC84_0174     TRUE 0.999 -3.000 0.742 0.002 Y NA
 7623429 7623430 SSUSC84_0174 SSUSC84_0175     FALSE 0.039 191.000 0.000 1.000 N NA
 7623432 7623433 SSUSC84_0177 SSUSC84_0178 agaS   FALSE 0.132 130.000 0.000 1.000   NA
 7623435 7623436 SSUSC84_0180 SSUSC84_0181     TRUE 0.916 -3.000 0.000 NA   NA
 7623438 7623439 SSUSC84_0183 SSUSC84_0184 dinB   TRUE 0.361 43.000 0.000 NA N NA
 7623439 7623440 SSUSC84_0184 SSUSC84_0185     FALSE 0.062 239.000 0.000 NA   NA
 7623440 7623441 SSUSC84_0185 SSUSC84_0186     FALSE 0.173 102.000 0.000 1.000   NA
 7623441 7623442 SSUSC84_0186 SSUSC84_0187     FALSE 0.148 66.000 0.000 1.000 N NA
 7623443 7623444 SSUSC84_0188 SSUSC84_0189     FALSE 0.090 184.000 0.000 NA   NA
 7623445 7623446 SSUSC84_0190 SSUSC84_0191     TRUE 0.981 5.000 0.250 NA   NA
 7623446 7623447 SSUSC84_0191 SSUSC84_0192     FALSE 0.144 120.000 0.000 NA   NA
 7623447 7623448 SSUSC84_0192 SSUSC84_0193     TRUE 0.781 19.000 0.000 NA   NA
 7623448 7623449 SSUSC84_0193 SSUSC84_0194     FALSE 0.068 217.000 0.000 NA   NA
 7623449 7623450 SSUSC84_0194 SSUSC84_0195     TRUE 0.998 -15.000 0.900 1.000 Y NA
 7623450 7623451 SSUSC84_0195 SSUSC84_0196     TRUE 0.969 39.000 0.222 1.000 Y NA
 7623451 7623452 SSUSC84_0196 SSUSC84_0197     TRUE 0.387 94.000 0.100 1.000 N NA
 7623452 7623453 SSUSC84_0197 SSUSC84_0198     FALSE 0.107 162.000 0.000 NA   NA
 7623453 7623454 SSUSC84_0198 SSUSC84_0199   tpx TRUE 0.867 4.000 0.000 NA   NA
 7623455 7623456 SSUSC84_0200 SSUSC84_0201     FALSE 0.145 241.000 0.099 1.000 N NA
 7623456 7623457 SSUSC84_0201 SSUSC84_0202     TRUE 0.922 10.000 0.080 1.000 N NA
 7623458 7623459 SSUSC84_0203 SSUSC84_0204     FALSE 0.028 409.000 0.000 1.000   NA
 7623460 7623461 SSUSC84_0205 SSUSC84_0206 treA   TRUE 0.932 81.000 0.650 1.000 Y NA
 7623462 7623463 SSUSC84_0207 SSUSC84_0208     TRUE 0.370 58.000 0.000 NA   NA
 7623463 7623464 SSUSC84_0208 SSUSC84_0209     TRUE 0.961 -3.000 0.019 NA   NA
 7623464 7623465 SSUSC84_0209 SSUSC84_0210   mutS2 FALSE 0.310 151.000 0.070 1.000   NA
 7623465 7623466 SSUSC84_0210 SSUSC84_0211 mutS2   TRUE 0.534 24.000 0.000 1.000 N NA
 7623466 7623467 SSUSC84_0211 SSUSC84_0212     FALSE 0.033 207.000 0.000 1.000 N NA
 7623467 7623468 SSUSC84_0212 SSUSC84_0213     FALSE 0.025 268.000 0.000 1.000 N NA
 7623468 7623469 SSUSC84_0213 SSUSC84_0214   msrAB TRUE 0.392 40.000 0.000 1.000 N NA
 7623469 7623470 SSUSC84_0214 SSUSC84_0215 msrAB   FALSE 0.124 139.000 0.000 1.000   NA
 7623470 7623471 SSUSC84_0215 SSUSC84_0216     FALSE 0.090 184.000 0.000 NA   NA
 7623471 7623472 SSUSC84_0216 SSUSC84_0217     TRUE 0.768 20.000 0.000 NA   NA
 7623472 7623473 SSUSC84_0217 SSUSC84_0218     TRUE 0.895 2.000 0.000 NA   NA
 7623473 7623474 SSUSC84_0218 SSUSC84_m0001     FALSE 0.070 213.000 0.000 NA   NA
 7623474 7623475 SSUSC84_m0001 SSUSC84_0219     FALSE 0.164 107.000 0.000 NA   NA
 7623475 7623476 SSUSC84_0219 SSUSC84_0220     FALSE 0.186 65.000 0.000 0.081 N NA
 7623476 7623477 SSUSC84_0220 SSUSC84_0221     TRUE 0.587 68.000 0.088 1.000   NA
 7623477 7623478 SSUSC84_0221 SSUSC84_0222     TRUE 0.405 55.000 0.000 NA   NA
 7623480 7623481 SSUSC84_0224 SSUSC84_0225 pyrD   FALSE 0.017 333.000 0.000 NA N NA
 7623481 7623482 SSUSC84_0225 SSUSC84_0226     TRUE 0.919 12.000 0.019 NA   NA
 7623483 7623484 SSUSC84_0227 SSUSC84_0228     TRUE 0.992 2.000 0.500 NA   NA
 7623484 7623485 SSUSC84_0228 SSUSC84_0229     TRUE 0.979 -7.000 0.115 NA   NA
 7623485 7623486 SSUSC84_0229 SSUSC84_0230     FALSE 0.210 85.000 0.000 1.000   NA
 7623488 7623489 SSUSC84_0232 SSUSC84_0233     TRUE 0.992 -3.000 0.350 NA   NA
 7623489 7623490 SSUSC84_0233 SSUSC84_0234     TRUE 0.986 -13.000 0.250 NA   NA
 7623491 7623492 SSUSC84_0235 SSUSC84_0236     TRUE 0.969 -25.000 0.121 1.000   NA
 7623494 7623495 SSUSC84_0238 SSUSC84_0239 gla   FALSE 0.134 129.000 0.000 1.000   NA
 7623495 7623496 SSUSC84_0239 SSUSC84_0240     FALSE 0.156 112.000 0.000 1.000   NA
 7623496 7623497 SSUSC84_0240 SSUSC84_0241     TRUE 0.895 2.000 0.000 NA   NA
 7623497 7623498 SSUSC84_0241 SSUSC84_0242     FALSE 0.106 163.000 0.000 NA   NA
 7623498 7623499 SSUSC84_0242 SSUSC84_0243     FALSE 0.026 435.000 0.000 NA   NA
 7623499 7623500 SSUSC84_0243 SSUSC84_0244     FALSE 0.161 108.000 0.000 NA   NA
 7623500 7623501 SSUSC84_0244 SSUSC84_0245     TRUE 0.563 43.000 0.000 NA   NA
 7623502 7623503 SSUSC84_0246 SSUSC84_0247 rpmG1 rpmF TRUE 0.969 16.000 0.012 0.040 Y NA
 7623506 7623507 SSUSC84_0250 SSUSC84_0251 adhE   FALSE 0.012 414.000 0.000 1.000 N NA
 7623507 7623508 SSUSC84_0251 SSUSC84_0252     FALSE 0.063 129.000 0.000 1.000 N NA
 7623508 7623509 SSUSC84_0252 SSUSC84_0253     TRUE 0.993 -7.000 0.576 0.014 N NA
 7623509 7623510 SSUSC84_0253 SSUSC84_0254     TRUE 0.971 1.000 0.081 NA   NA
 7623510 7623511 SSUSC84_0254 SSUSC84_0255     TRUE 0.995 -3.000 0.562 NA   NA
 7623511 7623512 SSUSC84_0255 SSUSC84_0256     TRUE 0.988 -36.000 0.429 1.000   NA
 7623512 7623513 SSUSC84_0256 SSUSC84_0257     TRUE 0.855 6.000 0.000 1.000   NA
 7623513 7623514 SSUSC84_0257 SSUSC84_0258   mvaK1 FALSE 0.039 190.000 0.000 1.000 N NA
 7623514 7623515 SSUSC84_0258 SSUSC84_0259 mvaK1 mvaD TRUE 0.996 -7.000 0.281 0.004 Y NA
 7623515 7623516 SSUSC84_0259 SSUSC84_0260 mvaD mvaK2 TRUE 0.996 2.000 0.312 0.004 Y NA
 7623516 7623517 SSUSC84_0260 SSUSC84_0261 mvaK2 fni TRUE 0.936 11.000 0.097 0.063 N NA
 7623518 7623519 SSUSC84_0262 SSUSC84_0263     TRUE 0.999 -10.000 0.911 0.014 Y NA
 7623520 7623521 SSUSC84_0264 SSUSC84_0265     TRUE 0.988 12.000 0.569 NA   NA
 7623521 7623522 SSUSC84_0265 SSUSC84_0266     FALSE 0.234 76.000 0.000 NA   NA
 7623522 7623523 SSUSC84_0266 SSUSC84_0267   hrcA FALSE 0.018 319.000 0.000 1.000 N NA
 7623523 7623524 SSUSC84_0267 SSUSC84_0268 hrcA grpE TRUE 0.896 13.000 0.051 1.000 N NA
 7623524 7623525 SSUSC84_0268 SSUSC84_0269 grpE dnaK TRUE 0.658 97.000 0.026 0.008 Y NA
 7623525 7623526 SSUSC84_0269 SSUSC84_0270 dnaK dnaJ TRUE 0.364 432.000 0.196 0.003 Y NA
 7623526 7623527 SSUSC84_0270 SSUSC84_0271 dnaJ   FALSE 0.024 276.000 0.000 1.000 N NA
 7623527 7623528 SSUSC84_0271 SSUSC84_0272     TRUE 0.692 10.000 0.000 1.000 N NA
 7623528 7623529 SSUSC84_0272 SSUSC84_0273     FALSE 0.066 125.000 0.000 1.000 N NA
 7623529 7623530 SSUSC84_0273 SSUSC84_0274     TRUE 0.780 91.000 0.125 0.036 Y NA
 7623531 7623532 SSUSC84_0275 SSUSC84_0276     TRUE 0.895 2.000 0.000 NA   NA
 7623532 7623533 SSUSC84_0276 SSUSC84_0277     FALSE 0.127 135.000 0.000 NA   NA
 7623533 7623534 SSUSC84_0277 SSUSC84_0278     FALSE 0.322 163.000 0.000 1.000 Y NA
 7623535 7623536 SSUSC84_0279 SSUSC84_0280 truA thiD TRUE 0.949 -10.000 0.058 1.000 N NA
 7623536 7623537 SSUSC84_0280 SSUSC84_0281 thiD   TRUE 0.988 -10.000 0.276 NA   NA
 7623537 7623538 SSUSC84_0281 SSUSC84_0282     TRUE 0.975 -19.000 0.149 NA   NA
 7623538 7623539 SSUSC84_0282 SSUSC84_0283     TRUE 0.910 0.000 0.000 NA   NA
 7623539 7623540 SSUSC84_0283 SSUSC84_0284     FALSE 0.054 273.000 0.000 NA   NA
 7623540 7623541 SSUSC84_0284 SSUSC84_0285     FALSE 0.049 281.000 0.000 NA   NA
 7623541 7623542 SSUSC84_0285 SSUSC84_0286     FALSE 0.350 80.000 0.057 NA N NA
 7623542 7623543 SSUSC84_0286 SSUSC84_0287     TRUE 0.699 26.000 0.000 NA   NA
 7623543 7623544 SSUSC84_0287 SSUSC84_0288     TRUE 0.912 -7.000 0.000 NA   NA
 7623544 7623545 SSUSC84_0288 SSUSC84_0289     TRUE 0.926 -7.000 0.000 0.020   NA
 7623545 7623546 SSUSC84_0289 SSUSC84_0290     TRUE 0.691 10.000 0.000 NA N NA
 7623548 7623549 SSUSC84_0292 SSUSC84_0293     FALSE 0.164 107.000 0.000 1.000   NA
 7623549 7623550 SSUSC84_0293 SSUSC84_0294   tig FALSE 0.031 222.000 0.000 1.000 N NA
 7623550 7623551 SSUSC84_0294 SSUSC84_0295 tig Similar to the c-terminal region of ICAA_STAEQ TRUE 0.453 51.000 0.000 NA   NA
 7623551 7623552 SSUSC84_0295 SSUSC84_0296 Similar to the c-terminal region of ICAA_STAEQ lmb FALSE 0.159 109.000 0.000 NA   NA
 7623552 7623553 SSUSC84_0296 SSUSC84_0297 lmb   TRUE 0.643 34.000 0.000 NA   NA
 7623553 7623554 SSUSC84_0297 SSUSC84_0298   rpoE FALSE 0.135 127.000 0.000 NA   NA
 7623554 7623555 SSUSC84_0298 SSUSC84_0299 rpoE pyrG FALSE 0.120 193.000 0.029 1.000 N NA
 7623555 7623556 SSUSC84_0299 SSUSC84_t0031 pyrG   FALSE 0.049 281.000 0.000 NA   NA
 7623556 7623557 SSUSC84_t0031 SSUSC84_0300   fba FALSE 0.063 235.000 0.000 NA   NA
 7623557 7623558 SSUSC84_0300 SSUSC84_0301 fba rpmB FALSE 0.013 393.000 0.000 1.000 N NA
 7623558 7623559 SSUSC84_0301 SSUSC84_r0007 rpmB   FALSE 0.021 621.000 0.000 NA   NA
 7623559 7623560 SSUSC84_r0007 SSUSC84_t0032     TRUE 0.437 52.000 0.000 NA   NA
 7623560 7623561 SSUSC84_t0032 SSUSC84_r0008     FALSE 0.051 280.000 0.000 NA   NA
 7623561 7623562 SSUSC84_r0008 SSUSC84_r0009     FALSE 0.225 78.000 0.000 NA   NA
 7623562 7623563 SSUSC84_r0009 SSUSC84_t0033     TRUE 0.903 1.000 0.000 NA   NA
 7623563 7623564 SSUSC84_t0033 SSUSC84_t0034     TRUE 0.735 23.000 0.000 NA   NA
 7623564 7623565 SSUSC84_t0034 SSUSC84_0302   recG FALSE 0.146 119.000 0.000 NA   NA
 7623569 7623570 SSUSC84_0306 SSUSC84_0307   codY FALSE 0.036 409.000 0.015 1.000 N NA
 7623570 7623571 SSUSC84_0307 SSUSC84_0308 codY   TRUE 0.904 -10.000 0.000 NA   NA
 7623571 7623572 SSUSC84_0308 SSUSC84_0309   rplS FALSE 0.058 254.000 0.000 NA   NA
 7623572 7623573 SSUSC84_0309 SSUSC84_0310 rplS   FALSE 0.108 161.000 0.000 1.000   NA
 7623573 7623574 SSUSC84_0310 SSUSC84_0311   gatC FALSE 0.069 217.000 0.000 1.000   NA
 7623574 7623575 SSUSC84_0311 SSUSC84_0312 gatC gatA TRUE 0.998 0.000 0.643 0.002 Y NA
 7623575 7623576 SSUSC84_0312 SSUSC84_0313 gatA gatB TRUE 0.998 0.000 0.492 0.002 Y NA
 7623576 7623577 SSUSC84_0313 SSUSC84_0314 gatB   FALSE 0.068 121.000 0.000 1.000 N NA
 7623579 7623580 SSUSC84_0316 SSUSC84_0317 galK galT TRUE 0.986 10.000 0.107 0.002 Y NA
 7623580 7623581 SSUSC84_0317 SSUSC84_0318 galT   FALSE 0.234 76.000 0.000 1.000   NA
 7623581 7623582 SSUSC84_0318 SSUSC84_0319     TRUE 0.494 48.000 0.000 1.000   NA
 7623582 7623583 SSUSC84_0319 SSUSC84_0320     FALSE 0.073 207.000 0.000 NA   NA
 7623583 7623584 SSUSC84_0320 SSUSC84_0321     FALSE 0.090 184.000 0.000 NA   NA
 7623584 7623585 SSUSC84_0321 SSUSC84_0322     TRUE 0.994 1.000 0.555 1.000   NA
 7623585 7623586 SSUSC84_0322 SSUSC84_0323     FALSE 0.162 273.000 0.068 NA   NA
 7623586 7623587 SSUSC84_0323 SSUSC84_0324     TRUE 0.945 13.000 0.150 NA N NA
 7623587 7623588 SSUSC84_0324 SSUSC84_0325     TRUE 0.995 -3.000 0.199 1.000 Y NA
 7623588 7623589 SSUSC84_0325 SSUSC84_0326     FALSE 0.158 110.000 0.000 NA   NA
 7623589 7623590 SSUSC84_0326 SSUSC84_0327     TRUE 0.916 -3.000 0.000 NA   NA
 7623590 7623591 SSUSC84_0327 SSUSC84_0328     TRUE 0.895 2.000 0.000 NA   NA
 7623591 7623592 SSUSC84_0328 SSUSC84_0329     FALSE 0.146 302.000 0.085 NA   NA
 7623592 7623593 SSUSC84_0329 SSUSC84_0330     FALSE 0.188 95.000 0.000 NA   NA
 7623593 7623594 SSUSC84_0330 SSUSC84_0331     TRUE 0.358 59.000 0.000 NA   NA
 7623594 7623595 SSUSC84_0331 SSUSC84_0332     FALSE 0.350 96.000 0.023 NA   NA
 7623595 7623596 SSUSC84_0332 SSUSC84_0333     FALSE 0.186 96.000 0.000 1.000   NA
 7623596 7623597 SSUSC84_0333 SSUSC84_0334     TRUE 0.978 -10.000 0.125 NA   NA
 7623597 7623598 SSUSC84_0334 SSUSC84_0335     TRUE 0.986 -3.000 0.188 NA   NA
 7623598 7623599 SSUSC84_0335 SSUSC84_0336     TRUE 0.998 -3.000 1.000 NA   NA
 7623599 7623600 SSUSC84_0336 SSUSC84_0337   fms TRUE 0.916 -3.000 0.000 NA   NA
 7623600 7623601 SSUSC84_0337 SSUSC84_0338 fms clpL FALSE 0.020 305.000 0.000 1.000 N NA
 7623601 7623602 SSUSC84_0338 SSUSC84_0339 clpL malM FALSE 0.042 183.000 0.000 1.000 N NA
 7623602 7623603 SSUSC84_0339 SSUSC84_0340 malM glgP TRUE 0.996 -7.000 0.289 0.029 Y NA
 7623605 7623606 SSUSC84_0342 SSUSC84_0343     TRUE 0.971 34.000 0.610 NA   NA
 7623607 7623608 SSUSC84_0344 SSUSC84_0345     TRUE 0.986 11.000 0.486 NA   NA
 7623609 7623610 SSUSC84_0346 SSUSC84_0347     FALSE 0.033 364.000 0.000 NA   NA
 7623610 7623611 SSUSC84_0347 SSUSC84_0348     TRUE 0.913 21.000 0.068 NA   NA
 7623611 7623612 SSUSC84_0348 SSUSC84_0349     FALSE 0.161 108.000 0.000 NA   NA
 7623612 7623613 SSUSC84_0349 SSUSC84_0350     FALSE 0.070 213.000 0.000 NA   NA
 7623613 7623614 SSUSC84_0350 SSUSC84_0351     FALSE 0.066 225.000 0.000 NA   NA
 7623614 7623615 SSUSC84_0351 SSUSC84_0352     FALSE 0.147 118.000 0.000 NA   NA
 7623615 7623616 SSUSC84_0352 SSUSC84_0353     TRUE 0.994 -3.000 0.530 1.000   NA
 7623616 7623617 SSUSC84_0353 SSUSC84_0354     FALSE 0.051 160.000 0.000 1.000 N NA
 7623618 7623619 SSUSC84_0355 SSUSC84_0356 gidB pbp1A TRUE 0.691 59.000 0.000 1.000 Y NA
 7623619 7623620 SSUSC84_0356 SSUSC84_0357 pbp1A recU TRUE 0.985 -31.000 0.319 1.000   NA
 7623621 7623622 SSUSC84_0358 SSUSC84_0359     TRUE 0.861 71.000 0.579 NA   NA
 7623622 7623623 SSUSC84_0359 SSUSC84_m0002     FALSE 0.123 139.000 0.000 NA   NA
 7623623 7623624 SSUSC84_m0002 SSUSC84_0360     TRUE 0.453 51.000 0.000 NA   NA
 7623624 7623625 SSUSC84_0360 SSUSC84_0361     TRUE 0.927 10.000 0.029 NA   NA
 7623627 7623628 SSUSC84_0363 SSUSC84_0364   gmk FALSE 0.195 155.000 0.010 1.000   NA
 7623628 7623629 SSUSC84_0364 SSUSC84_0365 gmk rpoZ TRUE 0.956 27.000 0.471 1.000 N NA
 7623629 7623630 SSUSC84_0365 SSUSC84_0366 rpoZ priA FALSE 0.138 193.000 0.032 0.070 N NA
 7623630 7623631 SSUSC84_0366 SSUSC84_0367 priA fmt FALSE 0.217 132.000 0.052 1.000 N NA
 7623631 7623632 SSUSC84_0367 SSUSC84_0368 fmt   TRUE 0.995 -13.000 0.305 1.000 Y NA
 7623632 7623633 SSUSC84_0368 SSUSC84_0369     TRUE 0.785 38.000 0.074 1.000 N NA
 7623633 7623634 SSUSC84_0369 SSUSC84_0370     TRUE 0.998 0.000 0.704 1.000 Y NA
 7623634 7623635 SSUSC84_0370 SSUSC84_0371     FALSE 0.071 421.000 0.039 NA   NA
 7623635 7623636 SSUSC84_0371 SSUSC84_0372     TRUE 0.996 -3.000 0.679 NA   NA
 7623636 7623637 SSUSC84_0372 SSUSC84_0373     TRUE 0.998 -28.000 0.853 0.014 Y NA
 7623637 7623638 SSUSC84_0373 SSUSC84_0374     TRUE 0.840 50.000 0.164 1.000   NA
 7623638 7623639 SSUSC84_0374 SSUSC84_0375     TRUE 0.979 2.000 0.151 1.000   NA
 7623640 7623641 SSUSC84_0376 SSUSC84_0377 cysM   TRUE 0.397 90.000 0.033 1.000   NA
 7623642 7623643 SSUSC84_0378 SSUSC84_0379 comFA comFC TRUE 0.980 -7.000 0.130 1.000   NA
 7623643 7623644 SSUSC84_0379 SSUSC84_0380 comFC   TRUE 0.517 77.000 0.080 NA   NA
 7623644 7623645 SSUSC84_0380 SSUSC84_r0010     FALSE 0.037 338.000 0.000 NA   NA
 7623645 7623646 SSUSC84_r0010 SSUSC84_t0035     TRUE 0.437 52.000 0.000 NA   NA
 7623646 7623647 SSUSC84_t0035 SSUSC84_r0011     FALSE 0.051 280.000 0.000 NA   NA
 7623647 7623648 SSUSC84_r0011 SSUSC84_r0012     FALSE 0.225 78.000 0.000 NA   NA
 7623648 7623649 SSUSC84_r0012 SSUSC84_t0036     TRUE 0.903 1.000 0.000 NA   NA
 7623649 7623650 SSUSC84_t0036 SSUSC84_t0037     TRUE 0.880 3.000 0.000 NA   NA
 7623650 7623651 SSUSC84_t0037 SSUSC84_t0038     TRUE 0.522 46.000 0.000 NA   NA
 7623651 7623652 SSUSC84_t0038 SSUSC84_t0039     TRUE 0.867 4.000 0.000 NA   NA
 7623652 7623653 SSUSC84_t0039 SSUSC84_t0040     TRUE 0.816 15.000 0.000 NA   NA
 7623653 7623654 SSUSC84_t0040 SSUSC84_t0041     TRUE 0.824 13.000 0.000 NA   NA
 7623654 7623655 SSUSC84_t0041 SSUSC84_t0042     TRUE 0.845 8.000 0.000 NA   NA
 7623655 7623656 SSUSC84_t0042 SSUSC84_t0043     TRUE 0.781 19.000 0.000 NA   NA
 7623656 7623657 SSUSC84_t0043 SSUSC84_t0044     TRUE 0.493 48.000 0.000 NA   NA
 7623659 7623660 SSUSC84_0382 SSUSC84_0383     TRUE 0.423 76.000 0.025 NA   NA
 7623660 7623661 SSUSC84_0383 SSUSC84_0384     TRUE 0.634 58.000 0.051 NA   NA
 7623661 7623662 SSUSC84_0384 SSUSC84_0385     FALSE 0.177 100.000 0.000 NA   NA
 7623664 7623665 SSUSC84_0387 SSUSC84_0388     TRUE 0.740 54.000 0.000 1.000 Y NA
 7623665 7623666 SSUSC84_0388 SSUSC84_0389     TRUE 0.990 42.000 0.810 0.025 Y NA
 7623666 7623667 SSUSC84_0389 SSUSC84_0390     TRUE 0.974 -13.000 0.000 0.025 Y NA
 7623667 7623668 SSUSC84_0390 SSUSC84_0391     TRUE 0.979 0.000 0.000 0.020 Y NA
 7623668 7623669 SSUSC84_0391 SSUSC84_0392     FALSE 0.229 216.000 0.000 1.000 Y NA
 7623669 7623670 SSUSC84_0392 SSUSC84_0393     TRUE 0.374 110.000 0.061 NA   NA
 7623670 7623671 SSUSC84_0393 SSUSC84_0394     TRUE 0.816 15.000 0.000 NA   NA
 7623671 7623672 SSUSC84_0394 SSUSC84_0395     FALSE 0.060 242.000 0.000 NA   NA
 7623672 7623673 SSUSC84_0395 SSUSC84_0396     TRUE 0.916 -3.000 0.000 NA   NA
 7623673 7623674 SSUSC84_0396 SSUSC84_0397   valS FALSE 0.249 115.000 0.008 NA   NA
 7623674 7623675 SSUSC84_0397 SSUSC84_0398 valS   FALSE 0.225 78.000 0.000 NA   NA
 7623675 7623676 SSUSC84_0398 SSUSC84_0399     FALSE 0.255 72.000 0.000 NA   NA
 7623676 7623677 SSUSC84_0399 SSUSC84_0400     FALSE 0.215 81.000 0.000 NA   NA
 7623677 7623678 SSUSC84_0400 SSUSC84_0401     FALSE 0.093 95.000 0.000 1.000 N NA
 7623678 7623679 SSUSC84_0401 SSUSC84_0402     FALSE 0.150 116.000 0.000 NA   NA
 7623679 7623680 SSUSC84_0402 SSUSC84_0403     TRUE 0.967 13.000 0.182 NA   NA
 7623680 7623681 SSUSC84_0403 SSUSC84_0404     TRUE 0.816 15.000 0.000 NA   NA
 7623681 7623682 SSUSC84_0404 SSUSC84_0405   asnA FALSE 0.320 84.000 0.005 NA   NA
 7623682 7623683 SSUSC84_0405 SSUSC84_0406 asnA   FALSE 0.060 133.000 0.000 1.000 N NA
 7623683 7623684 SSUSC84_0406 SSUSC84_0407     TRUE 0.894 18.000 0.015 NA   NA
 7623684 7623685 SSUSC84_0407 SSUSC84_0408     FALSE 0.020 707.000 0.000 NA   NA
 7623685 7623686 SSUSC84_0408 SSUSC84_0409     TRUE 0.912 -7.000 0.000 NA   NA
 7623686 7623687 SSUSC84_0409 SSUSC84_0410     TRUE 0.663 32.000 0.000 NA   NA
 7623687 7623688 SSUSC84_0410 SSUSC84_0411     FALSE 0.164 107.000 0.000 NA   NA
 7623688 7623689 SSUSC84_0411 SSUSC84_0412   srtC1 TRUE 0.731 114.000 0.500 NA   NA
 7623691 7623692 SSUSC84_0414 SSUSC84_0415 murD murG TRUE 0.986 3.000 0.060 1.000 Y NA
 7623692 7623693 SSUSC84_0415 SSUSC84_0416 murG   TRUE 0.984 6.000 0.072 NA Y NA
 7623693 7623694 SSUSC84_0416 SSUSC84_0417   ftsA TRUE 0.512 153.000 0.389 NA N NA
 7623694 7623695 SSUSC84_0417 SSUSC84_0418 ftsA ftsZ TRUE 0.988 26.000 0.460 1.000 Y NA
 7623695 7623696 SSUSC84_0418 SSUSC84_0419 ftsZ   TRUE 0.934 7.000 0.030 NA   NA
 7623696 7623697 SSUSC84_0419 SSUSC84_0420     TRUE 0.965 17.000 0.194 NA   NA
 7623697 7623698 SSUSC84_0420 SSUSC84_0421     TRUE 0.986 5.000 0.370 NA   NA
 7623698 7623699 SSUSC84_0421 SSUSC84_0422     TRUE 0.985 3.000 0.287 1.000   NA
 7623699 7623700 SSUSC84_0422 SSUSC84_0423     TRUE 0.989 9.000 0.579 NA   NA
 7623700 7623701 SSUSC84_0423 SSUSC84_m0003     TRUE 0.816 15.000 0.000 NA   NA
 7623701 7623702 SSUSC84_m0003 SSUSC84_0424     TRUE 0.915 -5.000 0.000 NA   NA
 7623702 7623703 SSUSC84_0424 SSUSC84_0425   ileS TRUE 0.838 11.000 0.000 1.000   NA
 7623704 7623705 SSUSC84_0426 SSUSC84_0427     TRUE 0.751 55.000 0.114 NA   NA
 7623705 7623706 SSUSC84_0427 SSUSC84_0428   clpE FALSE 0.191 180.000 0.079 1.000 N NA
 7623707 7623708 SSUSC84_0429 SSUSC84_0430     FALSE 0.312 126.000 0.044 NA   NA
 7623708 7623709 SSUSC84_0430 SSUSC84_0431   glnQ3 TRUE 0.998 -7.000 0.640 1.000 Y NA
 7623709 7623710 SSUSC84_0431 SSUSC84_0432 glnQ3 folD FALSE 0.170 130.000 0.017 1.000 N NA
 7623710 7623711 SSUSC84_0432 SSUSC84_0433 folD   FALSE 0.018 1449.000 0.000 NA   NA
 7623711 7623712 SSUSC84_0433 SSUSC84_0434     TRUE 0.469 50.000 0.000 NA   NA
 7623712 7623713 SSUSC84_0434 SSUSC84_0435     TRUE 0.781 19.000 0.000 NA   NA
 7623715 7623716 SSUSC84_0437 SSUSC84_0438 srtC2   FALSE 0.132 130.000 0.000 NA   NA
 7623716 7623717 SSUSC84_0438 SSUSC84_0439     FALSE 0.202 89.000 0.000 NA   NA
 7623719 7623720 SSUSC84_0441 SSUSC84_0442     TRUE 0.463 295.000 0.156 0.003 Y NA
 7623720 7623721 SSUSC84_0442 SSUSC84_0443     FALSE 0.137 126.000 0.000 NA   NA
 7623727 7623728 SSUSC84_0449 SSUSC84_0450     TRUE 0.994 -19.000 0.923 1.000 N NA
 7623728 7623729 SSUSC84_0450 SSUSC84_0451     TRUE 0.999 1.000 0.923 1.000 Y NA
 7623729 7623730 SSUSC84_0451 SSUSC84_0452     FALSE 0.065 126.000 0.000 NA N NA
 7623731 7623732 SSUSC84_0453 SSUSC84_0454   lysS FALSE 0.115 152.000 0.000 NA   NA
 7623732 7623733 SSUSC84_0454 SSUSC84_0455 lysS   FALSE 0.164 103.000 0.004 1.000 N NA
 7623733 7623734 SSUSC84_0455 SSUSC84_0456     TRUE 0.943 3.000 0.018 NA   NA
 7623734 7623735 SSUSC84_0456 SSUSC84_0457     TRUE 0.953 0.000 0.012 NA   NA
 7623735 7623736 SSUSC84_0457 SSUSC84_0458     FALSE 0.170 103.000 0.000 NA   NA
 7623736 7623737 SSUSC84_0458 SSUSC84_m0004     TRUE 0.358 59.000 0.000 NA   NA
 7623737 7623738 SSUSC84_m0004 SSUSC84_0459     TRUE 0.723 24.000 0.000 NA   NA
 7623739 7623740 SSUSC84_0460 SSUSC84_0461     TRUE 0.916 -3.000 0.000 NA   NA
 7623740 7623741 SSUSC84_0461 SSUSC84_0462   ftsW FALSE 0.125 137.000 0.000 NA   NA
 7623741 7623742 SSUSC84_0462 SSUSC84_0463 ftsW ppc TRUE 0.824 21.000 0.028 1.000 N NA
 7623742 7623743 SSUSC84_0463 SSUSC84_0464 ppc   FALSE 0.073 115.000 0.000 1.000 N NA
 7623743 7623744 SSUSC84_0464 SSUSC84_0465     TRUE 0.989 -13.000 0.333 NA   NA
 7623744 7623745 SSUSC84_0465 SSUSC84_0466   tufA FALSE 0.056 356.000 0.002 NA   NA
 7623745 7623746 SSUSC84_0466 SSUSC84_0467 tufA tpi FALSE 0.092 175.000 0.003 1.000 N NA
 7623747 7623748 SSUSC84_0468 SSUSC84_0469     TRUE 0.962 -10.000 0.035 1.000   NA
 7623749 7623750 SSUSC84_0470 SSUSC84_0471     TRUE 0.918 12.000 0.017 NA   NA
 7623753 7623754 SSUSC84_0474 SSUSC84_0475     TRUE 0.983 17.000 0.471 NA   NA
 7623754 7623755 SSUSC84_0475 SSUSC84_0476     TRUE 0.989 -7.000 0.412 1.000 N NA
 7623756 7623757 SSUSC84_0477 SSUSC84_0478 dnaE pfk TRUE 0.409 85.000 0.098 1.000 N NA
 7623757 7623758 SSUSC84_0478 SSUSC84_0479 pfk pyk TRUE 0.908 67.000 0.261 0.006 Y NA
 7623758 7623759 SSUSC84_0479 SSUSC84_0480 pyk   FALSE 0.108 161.000 0.000 1.000   NA
 7623761 7623762 SSUSC84_0482 SSUSC84_0483   sipC TRUE 0.563 43.000 0.000 1.000   NA
 7623762 7623763 SSUSC84_0483 SSUSC84_0484 sipC glmS FALSE 0.155 190.000 0.011 1.000   NA
 7623763 7623764 SSUSC84_0484 SSUSC84_0485 glmS   FALSE 0.054 152.000 0.000 1.000 N NA
 7623764 7623765 SSUSC84_0485 SSUSC84_0486     TRUE 0.986 10.000 0.130 1.000 Y NA
 7623765 7623766 SSUSC84_0486 SSUSC84_0487     TRUE 0.980 21.000 0.154 1.000 Y NA
 7623768 7623769 SSUSC84_0489 SSUSC84_0490     TRUE 0.573 42.000 0.000 NA   NA
 7623771 7623772 SSUSC84_0492 SSUSC84_0493   proB FALSE 0.051 160.000 0.000 1.000 N NA
 7623772 7623773 SSUSC84_0493 SSUSC84_0494 proB proA TRUE 0.920 65.000 0.281 0.002 Y NA
 7623773 7623774 SSUSC84_0494 SSUSC84_0495 proA proC TRUE 0.974 10.000 0.009 0.002 Y NA
 7623778 7623779 SSUSC84_0499 SSUSC84_0500   wzg FALSE 0.167 105.000 0.000 NA   NA
 7623779 7623780 SSUSC84_0500 SSUSC84_0501 wzg cps2B TRUE 0.631 18.000 0.000 1.000 N NA
 7623780 7623781 SSUSC84_0501 SSUSC84_0502 cps2B wze TRUE 0.989 10.000 0.800 1.000 N NA
 7623781 7623782 SSUSC84_0502 SSUSC84_0503 wze wzh TRUE 0.406 39.000 0.000 1.000 N NA
 7623782 7623783 SSUSC84_0503 SSUSC84_0504 wzh cps2E TRUE 0.907 25.000 0.000 NA Y NA
 7623783 7623784 SSUSC84_0504 SSUSC84_0505 cps2E cps2F TRUE 0.945 35.000 0.067 NA Y NA
 7623784 7623785 SSUSC84_0505 SSUSC84_0506 cps2F csp2G TRUE 0.987 4.000 0.083 0.015 Y NA
 7623785 7623786 SSUSC84_0506 SSUSC84_0507 csp2G csp2H FALSE 0.030 389.000 0.000 NA   NA
 7623786 7623787 SSUSC84_0507 SSUSC84_0508 csp2H wzy FALSE 0.274 68.000 0.000 NA   NA
 7623787 10784644 SSUSC84_0508 SSUSC84_0508a wzy   TRUE 0.862 -1127.000 0.000 NA   NA
 10784644 7623788 SSUSC84_0508a SSUSC84_0509   cps2J FALSE 0.071 211.000 0.000 NA   NA
 7623788 7623789 SSUSC84_0509 SSUSC84_0510 cps2J csp2K TRUE 0.912 -7.000 0.000 NA   NA
 7623789 7623790 SSUSC84_0510 SSUSC84_0511 csp2K   TRUE 0.595 40.000 0.000 NA   NA
 7623790 7623791 SSUSC84_0511 SSUSC84_0512     TRUE 0.563 43.000 0.000 NA   NA
 7623791 7623792 SSUSC84_0512 SSUSC84_0513     FALSE 0.330 61.000 0.000 NA   NA
 7623792 7623793 SSUSC84_0513 SSUSC84_0514     FALSE 0.089 186.000 0.000 NA   NA
 7623793 7623794 SSUSC84_0514 SSUSC84_0515     FALSE 0.177 100.000 0.000 NA   NA
 7623794 7623795 SSUSC84_0515 SSUSC84_0516     TRUE 0.932 9.000 0.033 1.000   NA
 7623795 7623796 SSUSC84_0516 SSUSC84_0517   neuB FALSE 0.023 523.000 0.000 1.000   NA
 7623796 7623797 SSUSC84_0517 SSUSC84_0518 neuB neuC TRUE 0.995 12.000 0.549 1.000 Y NA
 7623797 7623798 SSUSC84_0518 SSUSC84_0519 neuC   TRUE 0.906 14.000 0.013 1.000   NA
 7623798 7623799 SSUSC84_0519 SSUSC84_0520   neuA TRUE 0.917 9.000 0.013 1.000   NA
 7623799 7623800 SSUSC84_0520 SSUSC84_0521 neuA   FALSE 0.079 197.000 0.000 NA   NA
 7623800 7623801 SSUSC84_0521 SSUSC84_0522     FALSE 0.058 250.000 0.000 NA   NA
 7623801 7623802 SSUSC84_0522 SSUSC84_0523     TRUE 0.939 18.000 0.000 NA Y NA
 7623802 7623803 SSUSC84_0523 SSUSC84_0524     TRUE 0.626 37.000 0.000 NA   NA
 7623803 7623804 SSUSC84_0524 SSUSC84_0525     TRUE 0.878 -19.000 0.000 NA   NA
 7623804 7623805 SSUSC84_0525 SSUSC84_0526     FALSE 0.342 60.000 0.000 NA   NA
 7623805 7623806 SSUSC84_0526 SSUSC84_0527     FALSE 0.061 240.000 0.000 NA   NA
 7623806 7623807 SSUSC84_0527 SSUSC84_0528     FALSE 0.077 200.000 0.000 NA   NA
 7623807 7623808 SSUSC84_0528 SSUSC84_0529     TRUE 0.878 -19.000 0.000 NA   NA
 7623812 7623813 SSUSC84_0533 SSUSC84_0534 aroA aroK TRUE 0.972 9.000 0.012 1.000 Y NA
 7623813 7623814 SSUSC84_0534 SSUSC84_0535 aroK pheA TRUE 0.987 -9.000 0.025 1.000 Y NA
 7623814 7623815 SSUSC84_0535 SSUSC84_0536 pheA   TRUE 0.879 12.000 0.025 NA N NA
 7623815 7623816 SSUSC84_0536 SSUSC84_0537     TRUE 0.494 66.000 0.093 NA N NA
 7623819 7623820 SSUSC84_0540 SSUSC84_0541     TRUE 0.852 63.000 0.414 1.000   NA
 7623821 7623822 SSUSC84_0542 SSUSC84_0543     TRUE 0.939 18.000 0.000 NA Y NA
 7623822 7623823 SSUSC84_0543 SSUSC84_0544     TRUE 0.358 59.000 0.000 NA   NA
 7623823 7623824 SSUSC84_0544 SSUSC84_0545   aspC TRUE 0.987 -3.000 0.205 NA   NA
 7623824 7623825 SSUSC84_0545 SSUSC84_0546 aspC asnS TRUE 0.905 15.000 0.068 1.000 N NA
 7623825 7623826 SSUSC84_0546 SSUSC84_0547 asnS   FALSE 0.055 272.000 0.000 NA   NA
 7623826 7623827 SSUSC84_0547 SSUSC84_0548     TRUE 0.997 -10.000 1.000 NA   NA
 7623827 7623828 SSUSC84_0548 SSUSC84_0549     FALSE 0.013 406.000 0.000 NA N NA
 7623828 7623829 SSUSC84_0549 SSUSC84_0550     FALSE 0.266 51.000 0.000 NA N NA
 7623829 7623830 SSUSC84_0550 SSUSC84_0551     TRUE 0.896 22.000 0.051 NA   NA
 7623830 7623831 SSUSC84_0551 SSUSC84_0552     TRUE 0.987 -3.000 0.214 NA   NA
 7623831 7623832 SSUSC84_0552 SSUSC84_0553     TRUE 0.993 -3.000 0.470 NA   NA
 7623832 7623833 SSUSC84_0553 SSUSC84_0554     FALSE 0.048 286.000 0.000 NA   NA
 7623833 7623834 SSUSC84_0554 SSUSC84_0555   arcA FALSE 0.026 261.000 0.000 1.000 N NA
 7623834 7623835 SSUSC84_0555 SSUSC84_0556 arcA   TRUE 0.969 0.000 0.056 1.000   NA
 7623835 7623836 SSUSC84_0556 SSUSC84_0557   arcB TRUE 0.937 19.000 0.104 1.000   NA
 7623836 7623837 SSUSC84_0557 SSUSC84_0558 arcB arcC TRUE 0.719 118.000 0.146 1.000 Y NA
 7623837 7623838 SSUSC84_0558 SSUSC84_0559 arcC   FALSE 0.036 343.000 0.000 NA   NA
 7623838 7623839 SSUSC84_0559 SSUSC84_0560     TRUE 0.463 119.000 0.140 NA   NA
 7623839 7623840 SSUSC84_0560 SSUSC84_0561     FALSE 0.014 371.000 0.000 1.000 N NA
 7623841 7623842 SSUSC84_0562 SSUSC84_0563 argR queA FALSE 0.290 49.000 0.000 1.000 N NA
 7623843 7623844 SSUSC84_0564 SSUSC84_0565 nagB   FALSE 0.025 467.000 0.000 NA   NA
 7623844 7623845 SSUSC84_0565 SSUSC84_0566     FALSE 0.029 399.000 0.000 NA   NA
 7623845 7623846 SSUSC84_0566 SSUSC84_0567     FALSE 0.027 432.000 0.000 NA   NA
 7623846 7623847 SSUSC84_0567 SSUSC84_0568     FALSE 0.158 110.000 0.000 NA   NA
 7623847 7623848 SSUSC84_0568 SSUSC84_0569   dltA FALSE 0.021 615.000 0.000 NA   NA
 7623848 7623849 SSUSC84_0569 SSUSC84_0570 dltA dltB TRUE 0.990 -3.000 0.435 NA N NA
 7623849 7623850 SSUSC84_0570 SSUSC84_0571 dltB dltC TRUE 0.938 43.000 0.387 NA   NA
 7623850 7623851 SSUSC84_0571 SSUSC84_0572 dltC dltD TRUE 0.992 -7.000 0.409 NA   NA
 7623852 7623853 SSUSC84_0573 SSUSC84_0574     FALSE 0.248 73.000 0.000 NA   NA
 7623854 7623855 SSUSC84_0575 SSUSC84_0576     TRUE 0.667 14.000 0.000 1.000 N NA
 7623856 7623857 SSUSC84_0577 SSUSC84_0578 fhuG fhuB TRUE 0.999 -3.000 0.857 0.033 Y NA
 7623857 7623858 SSUSC84_0578 SSUSC84_0579 fhuB fhuD TRUE 0.987 14.000 0.179 1.000 Y NA
 7623858 7623859 SSUSC84_0579 SSUSC84_0580 fhuD fhuC TRUE 0.997 13.000 0.889 1.000 Y NA
 7623859 7623860 SSUSC84_0580 SSUSC84_0581 fhuC murE FALSE 0.210 152.000 0.062 1.000 N NA
 7623861 7623862 SSUSC84_0582 SSUSC84_0583   comEA TRUE 0.365 63.000 0.014 1.000 N NA
 7623862 7623863 SSUSC84_0583 SSUSC84_0584 comEA comEC TRUE 0.973 -16.000 0.130 1.000   NA
 7623863 7623864 SSUSC84_0584 SSUSC84_0585 comEC   TRUE 0.806 17.000 0.000 NA   NA
 7623864 7623865 SSUSC84_0585 SSUSC84_0586     FALSE 0.094 180.000 0.000 NA   NA
 7623865 7623866 SSUSC84_0586 SSUSC84_0587     FALSE 0.191 94.000 0.000 NA   NA
 7623866 7623867 SSUSC84_0587 SSUSC84_0588     TRUE 0.994 6.000 0.818 NA   NA
 7623869 7623870 SSUSC84_0590 SSUSC84_0591 tmk holB TRUE 0.984 -3.000 0.254 1.000 N NA
 7623870 7623871 SSUSC84_0591 SSUSC84_0592 holB   TRUE 0.900 20.000 0.038 NA   NA
 7623871 7623872 SSUSC84_0592 SSUSC84_0593     TRUE 0.960 2.000 0.043 NA   NA
 7623872 7623873 SSUSC84_0593 SSUSC84_0594   serC FALSE 0.024 470.000 0.000 1.000   NA
 7623873 7623874 SSUSC84_0594 SSUSC84_0595 serC   TRUE 0.954 0.000 0.012 1.000   NA
 7623874 7623875 SSUSC84_0595 SSUSC84_0596     TRUE 0.628 54.000 0.013 0.055   NA
 7623875 7623876 SSUSC84_0596 SSUSC84_0597   ogt TRUE 0.888 3.000 0.009 1.000 N NA
 7623876 7623877 SSUSC84_0597 SSUSC84_0598 ogt   TRUE 0.933 -16.000 0.050 1.000 N NA
 7623878 7623879 SSUSC84_0599 SSUSC84_0600   exoA FALSE 0.041 187.000 0.000 1.000 N NA
 7623880 7623881 SSUSC84_0601 SSUSC84_0602     FALSE 0.109 160.000 0.000 NA   NA
 7623881 7623882 SSUSC84_0602 SSUSC84_0603     FALSE 0.139 125.000 0.000 NA   NA
 7623882 7623883 SSUSC84_0603 SSUSC84_0604     FALSE 0.079 196.000 0.000 NA   NA
 7623885 7623886 SSUSC84_0606 SSUSC84_0607     TRUE 0.806 17.000 0.000 NA   NA
 7623886 7623887 SSUSC84_0607 SSUSC84_0608     FALSE 0.018 1141.000 0.000 NA   NA
 7623887 7623888 SSUSC84_0608 SSUSC84_0609     TRUE 0.867 4.000 0.000 NA   NA
 7623888 7623889 SSUSC84_0609 SSUSC84_0610     FALSE 0.067 222.000 0.000 NA   NA
 7623890 7623891 SSUSC84_0611 SSUSC84_0612 pgmA   TRUE 0.495 91.000 0.098 NA   NA
 7623891 7623892 SSUSC84_0612 SSUSC84_0613   coaC TRUE 0.951 -13.000 0.019 NA   NA
 7623892 7623893 SSUSC84_0613 SSUSC84_0614 coaC dpfB TRUE 0.957 -7.000 0.013 1.000   NA
 7623896 7623897 SSUSC84_0617 SSUSC84_0618     FALSE 0.095 93.000 0.000 1.000 N NA
 7623897 7623898 SSUSC84_0618 SSUSC84_0619     TRUE 0.884 -16.000 0.000 NA   NA
 7623898 7623899 SSUSC84_0619 SSUSC84_0620     TRUE 0.912 -7.000 0.000 NA   NA
 7623899 7623900 SSUSC84_0620 SSUSC84_0621     FALSE 0.114 153.000 0.000 NA   NA
 7623902 7623903 SSUSC84_0623 SSUSC84_0624     TRUE 0.956 1.000 0.021 NA   NA
 7623903 7623904 SSUSC84_0624 SSUSC84_0625     TRUE 0.904 -10.000 0.000 NA   NA
 7623904 7623905 SSUSC84_0625 SSUSC84_0626     TRUE 0.840 9.000 0.000 NA   NA
 7623907 7623908 SSUSC84_0628 SSUSC84_0629     TRUE 0.989 13.000 0.188 0.039 Y NA
 7623908 7623909 SSUSC84_0629 SSUSC84_0630     FALSE 0.188 188.000 0.091 1.000 N NA
 7623909 7623910 SSUSC84_0630 SSUSC84_0631     TRUE 0.994 33.000 0.889 0.015 Y NA
 7623910 7623911 SSUSC84_0631 SSUSC84_0632     TRUE 0.998 13.000 0.889 0.015 Y NA
 7623911 7623912 SSUSC84_0632 SSUSC84_0633   pflD FALSE 0.295 152.000 0.132 1.000 N NA
 7623912 7623913 SSUSC84_0633 SSUSC84_0634 pflD fsaA TRUE 0.972 15.000 0.368 1.000 N NA
 7623913 7623914 SSUSC84_0634 SSUSC84_0635 fsaA   TRUE 0.464 32.000 0.000 1.000 N NA
 7623914 7623915 SSUSC84_0635 SSUSC84_0636   gldA TRUE 0.435 121.000 0.000 0.006 Y NA
 7623915 7623916 SSUSC84_0636 SSUSC84_0637 gldA asd FALSE 0.048 169.000 0.000 1.000 N NA
 7623916 7623917 SSUSC84_0637 SSUSC84_0638 asd dapA TRUE 0.762 73.000 0.063 1.000 Y NA
 7623917 7623918 SSUSC84_0638 SSUSC84_0639 dapA   FALSE 0.032 370.000 0.000 1.000   NA
 7623918 7623919 SSUSC84_0639 SSUSC84_0640     TRUE 0.992 -10.000 0.462 NA   NA
 7623919 7623920 SSUSC84_0640 SSUSC84_0641   glpK TRUE 0.482 230.000 0.462 NA   NA
 7623920 7623921 SSUSC84_0641 SSUSC84_0642 glpK glpO TRUE 0.932 76.000 0.500 0.001 Y NA
 7623921 7623922 SSUSC84_0642 SSUSC84_0643 glpO glpF1 TRUE 0.980 14.000 0.500 1.000 N NA
 7623922 7623923 SSUSC84_0643 SSUSC84_0644 glpF1   FALSE 0.129 132.000 0.000 NA   NA
 7623923 7623924 SSUSC84_0644 SSUSC84_0645     TRUE 0.824 13.000 0.000 NA   NA
 7623926 7623927 SSUSC84_0647 SSUSC84_0648   nox FALSE 0.090 185.000 0.000 1.000   NA
 7623927 7623928 SSUSC84_0648 SSUSC84_0649 nox pcrA FALSE 0.054 289.000 0.000 0.057   NA
 7623928 7623929 SSUSC84_0649 SSUSC84_m0005 pcrA   FALSE 0.316 63.000 0.000 NA   NA
 7623929 7623930 SSUSC84_m0005 SSUSC84_0650     FALSE 0.038 335.000 0.000 NA   NA
 7623930 7623931 SSUSC84_0650 SSUSC84_0651   thiD TRUE 0.916 -3.000 0.000 1.000   NA
 7623931 7623932 SSUSC84_0651 SSUSC84_0652 thiD thiM TRUE 0.982 5.000 0.032 0.004 Y NA
 7623932 7623933 SSUSC84_0652 SSUSC84_0653 thiM thiE TRUE 0.991 -7.000 0.061 0.004 Y NA
 7623933 7623934 SSUSC84_0653 SSUSC84_0654 thiE   FALSE 0.011 484.000 0.000 NA N NA
 7623934 7623935 SSUSC84_0654 SSUSC84_0655     TRUE 0.928 12.000 0.098 NA N NA
 7623935 7623936 SSUSC84_0655 SSUSC84_0656     TRUE 0.944 5.000 0.039 NA   NA
 7623936 7623937 SSUSC84_0656 SSUSC84_0657     TRUE 0.768 20.000 0.000 NA   NA
 7623937 7623938 SSUSC84_0657 SSUSC84_0658     TRUE 0.976 0.000 0.000 1.000 Y NA
 7623938 7623939 SSUSC84_0658 SSUSC84_0659     TRUE 0.998 -3.000 0.667 0.033 Y NA
 7623939 7623940 SSUSC84_0659 SSUSC84_0660     FALSE 0.021 622.000 0.000 1.000   NA
 7623940 7623941 SSUSC84_0660 SSUSC84_0661     FALSE 0.220 79.000 0.000 NA   NA
 7623941 7623942 SSUSC84_0661 SSUSC84_0662     FALSE 0.060 243.000 0.000 NA   NA
 7623942 7623943 SSUSC84_0662 SSUSC84_0663     FALSE 0.035 351.000 0.000 NA   NA
 7623943 7623944 SSUSC84_0663 SSUSC84_0664     FALSE 0.202 89.000 0.000 NA   NA
 7623945 7623946 SSUSC84_0665 SSUSC84_0666     TRUE 0.992 -3.000 0.341 NA   NA
 7623947 7623948 SSUSC84_0667 SSUSC84_0668 uvrC   TRUE 0.377 57.000 0.000 NA   NA
 7623948 7623949 SSUSC84_0668 SSUSC84_0669     FALSE 0.136 204.000 0.011 NA   NA
 7623949 7623950 SSUSC84_0669 SSUSC84_0670     FALSE 0.057 374.000 0.009 NA   NA
 7623950 7623951 SSUSC84_0670 SSUSC84_0671   mrp FALSE 0.033 364.000 0.000 NA   NA
 7623951 7623952 SSUSC84_0671 SSUSC84_0672 mrp addB FALSE 0.046 291.000 0.000 1.000   NA
 7623952 7623953 SSUSC84_0672 SSUSC84_0673 addB addA TRUE 0.991 0.000 0.070 0.064 Y NA
 7623955 7623956 SSUSC84_0675 SSUSC84_0676 parE   TRUE 0.832 30.000 0.025 NA   NA
 7623956 7623957 SSUSC84_0676 SSUSC84_0677     TRUE 0.424 53.000 0.000 NA   NA
 7623957 7623958 SSUSC84_0677 SSUSC84_0678     TRUE 0.723 24.000 0.000 NA   NA
 7623958 7623959 SSUSC84_0678 SSUSC84_0679     TRUE 0.653 33.000 0.000 NA   NA
 7623959 7623960 SSUSC84_0679 SSUSC84_0680     TRUE 0.880 3.000 0.000 NA   NA
 7623960 7623961 SSUSC84_0680 SSUSC84_0681   parC FALSE 0.076 201.000 0.000 NA   NA
 7623961 7623962 SSUSC84_0681 SSUSC84_0682 parC   FALSE 0.316 63.000 0.000 NA   NA
 7623962 7623963 SSUSC84_0682 SSUSC84_0683     FALSE 0.156 111.000 0.000 NA   NA
 7623963 7623964 SSUSC84_0683 SSUSC84_0684     TRUE 0.600 67.000 0.095 NA   NA
 7623964 7623965 SSUSC84_0684 SSUSC84_t0045     TRUE 0.437 52.000 0.000 NA   NA
 7623965 7623966 SSUSC84_t0045 SSUSC84_t0046     FALSE 0.052 276.000 0.000 NA   NA
 7623966 7623967 SSUSC84_t0046 SSUSC84_0685     FALSE 0.141 124.000 0.000 NA   NA
 7623967 7623968 SSUSC84_0685 SSUSC84_t0047     TRUE 0.620 38.000 0.000 NA   NA
 7623968 7623969 SSUSC84_t0047 SSUSC84_0686     FALSE 0.323 62.000 0.000 NA   NA
 7623970 7623971 SSUSC84_0687 SSUSC84_0688     FALSE 0.330 61.000 0.000 NA   NA
 7623972 7623973 SSUSC84_0689 SSUSC84_0690   thiI TRUE 0.985 2.000 0.349 1.000 N NA
 7623973 7623974 SSUSC84_0690 SSUSC84_0691 thiI brnQ FALSE 0.068 122.000 0.000 1.000 N NA
 7623974 7623975 SSUSC84_0691 SSUSC84_0692 brnQ rplU FALSE 0.039 191.000 0.000 1.000 N NA
 7623975 7623976 SSUSC84_0692 SSUSC84_0693 rplU rpmA TRUE 0.984 47.000 0.667 0.026 Y NA
 7623976 7623977 SSUSC84_0693 SSUSC84_0694 rpmA   FALSE 0.083 192.000 0.000 NA   NA
 7623977 7623978 SSUSC84_0694 SSUSC84_0695   cpsY TRUE 0.632 36.000 0.000 NA   NA
 7623978 7623979 SSUSC84_0695 SSUSC84_0696 cpsY lspA TRUE 0.969 -7.000 0.119 1.000 N NA
 7623979 10784645 SSUSC84_0696 SSUSC84_0696b lspA   TRUE 0.863 -458.000 0.000 NA   NA
 10784645 7623980 SSUSC84_0696b SSUSC84_0697     TRUE 0.904 -10.000 0.000 NA   NA
 7623980 7623981 SSUSC84_0697 SSUSC84_0698     FALSE 0.108 81.000 0.000 1.000 N NA
 7623981 7623982 SSUSC84_0698 SSUSC84_0699     TRUE 0.659 48.000 0.011 NA   NA
 7623982 7623983 SSUSC84_0699 SSUSC84_0700   pyrR FALSE 0.078 199.000 0.000 NA   NA
 7623983 7623984 SSUSC84_0700 SSUSC84_0701 pyrR pyrB TRUE 0.933 56.000 0.247 1.000 Y NA
 7623984 7623985 SSUSC84_0701 SSUSC84_0702 pyrB carA FALSE 0.300 248.000 0.014 1.000 Y NA
 7623985 7623986 SSUSC84_0702 SSUSC84_0703 carA carB FALSE 0.344 360.000 0.117 0.001 Y NA
 7623986 7623987 SSUSC84_0703 SSUSC84_0704 carB   FALSE 0.306 64.000 0.000 NA   NA
 7623987 7623988 SSUSC84_0704 SSUSC84_0705   pcp TRUE 0.916 -3.000 0.000 NA   NA
 7623988 7623989 SSUSC84_0705 SSUSC84_0706 pcp   TRUE 0.832 12.000 0.000 NA   NA
 7623989 7623990 SSUSC84_0706 SSUSC84_0707   rpsP FALSE 0.141 124.000 0.000 NA   NA
 7623990 7623991 SSUSC84_0707 SSUSC84_0708 rpsP   TRUE 0.972 22.000 0.385 1.000   NA
 7623991 7623992 SSUSC84_0708 SSUSC84_0709     FALSE 0.234 76.000 0.000 1.000   NA
 7623992 7623993 SSUSC84_0709 SSUSC84_0710     TRUE 0.998 9.000 0.846 0.013 Y NA
 7623995 7623996 SSUSC84_0712 SSUSC84_0713 hom thrB TRUE 0.982 4.000 0.036 1.000 Y NA
 7623996 7623997 SSUSC84_0713 SSUSC84_0714 thrB murB FALSE 0.029 235.000 0.000 1.000 N NA
 7623997 7623998 SSUSC84_0714 SSUSC84_0715 murB potA TRUE 0.729 39.000 0.041 1.000 N NA
 7623998 7623999 SSUSC84_0715 SSUSC84_0716 potA potB TRUE 0.999 -16.000 0.928 0.032 Y NA
 7623999 7624000 SSUSC84_0716 SSUSC84_0717 potB potC TRUE 0.998 0.000 0.492 0.032 Y NA
 7624000 7624001 SSUSC84_0717 SSUSC84_0718 potC potD TRUE 0.996 0.000 0.253 0.032 Y NA
 7624001 7624002 SSUSC84_0718 SSUSC84_0719 potD   FALSE 0.224 114.000 0.022 0.071 N NA
 7624006 7624007 SSUSC84_0723 SSUSC84_0724 nth   FALSE 0.048 286.000 0.000 1.000   NA
 7624007 7624008 SSUSC84_0724 SSUSC84_0725   mdtK FALSE 0.267 70.000 0.000 NA   NA
 7624008 10784646 SSUSC84_0725 SSUSC84_0725c mdtK   TRUE 0.861 -1315.000 0.000 NA   NA
 10784646 7624009 SSUSC84_0725c SSUSC84_0726   rimM FALSE 0.139 125.000 0.000 NA   NA
 7624009 7624010 SSUSC84_0726 SSUSC84_0727 rimM trmD TRUE 0.998 -10.000 0.672 1.000 Y NA
 7624010 7624011 SSUSC84_0727 SSUSC84_0728 trmD hisC TRUE 0.742 4.000 0.000 1.000 N NA
 7624011 7624012 SSUSC84_0728 SSUSC84_0729 hisC   FALSE 0.084 102.000 0.000 1.000 N NA
 7624012 7624013 SSUSC84_0729 SSUSC84_0730   fruK TRUE 0.998 -3.000 0.721 1.000 Y NA
 7624013 7624014 SSUSC84_0730 SSUSC84_0731 fruK fruA TRUE 0.999 -3.000 0.816 1.000 Y NA
 7624014 7624015 SSUSC84_0731 SSUSC84_0732 fruA   FALSE 0.350 96.000 0.022 1.000   NA
 7624015 7624016 SSUSC84_0732 SSUSC84_0733     TRUE 0.977 2.000 0.139 NA   NA
 7624016 7624017 SSUSC84_0733 SSUSC84_0734   dapB TRUE 0.901 9.000 0.004 NA   NA
 7624017 7624018 SSUSC84_0734 SSUSC84_0735 dapB cca TRUE 0.934 -3.000 0.015 1.000 N NA
 7624018 7624019 SSUSC84_0735 SSUSC84_0736 cca   TRUE 0.970 -7.000 0.056 1.000   NA
 7624019 7624020 SSUSC84_0736 SSUSC84_0737     TRUE 0.903 1.000 0.000 NA   NA
 7624020 7624021 SSUSC84_0737 SSUSC84_0738   glkA FALSE 0.185 96.000 0.000 NA   NA
 7624021 7624022 SSUSC84_0738 SSUSC84_0739 glkA   FALSE 0.137 126.000 0.000 NA   NA
 7624022 7624023 SSUSC84_0739 SSUSC84_0740     TRUE 0.832 12.000 0.000 NA   NA
 7624023 7624024 SSUSC84_0740 SSUSC84_0741   thyA TRUE 0.424 53.000 0.000 NA   NA
 7624024 7624025 SSUSC84_0741 SSUSC84_0742 thyA dyr FALSE 0.245 286.000 0.295 1.000 N NA
 7624025 7624026 SSUSC84_0742 SSUSC84_0743 dyr   TRUE 0.949 3.000 0.030 NA   NA
 7624026 7624027 SSUSC84_0743 SSUSC84_0744   clpX TRUE 0.856 22.000 0.012 NA   NA
 7624027 7624028 SSUSC84_0744 SSUSC84_0745 clpX engB TRUE 0.644 56.000 0.043 1.000   NA
 7624028 7624029 SSUSC84_0745 SSUSC84_0746 engB ndk TRUE 0.735 23.000 0.000 1.000   NA
 7624029 7624030 SSUSC84_0746 SSUSC84_0747 ndk   FALSE 0.168 104.000 0.000 NA   NA
 7624030 7624031 SSUSC84_0747 SSUSC84_0748   lepA FALSE 0.049 282.000 0.000 NA   NA
 7624033 7624034 SSUSC84_0750 SSUSC84_0751     FALSE 0.081 195.000 0.000 NA   NA
 7624034 7624035 SSUSC84_0751 SSUSC84_0752   tdk TRUE 0.806 17.000 0.000 NA   NA
 7624035 7624036 SSUSC84_0752 SSUSC84_0753 tdk prfA FALSE 0.051 451.000 0.062 1.000 N NA
 7624036 7624037 SSUSC84_0753 SSUSC84_0754 prfA   TRUE 0.991 0.000 0.084 1.000 Y NA
 7624037 7624038 SSUSC84_0754 SSUSC84_0755     TRUE 0.988 -7.000 0.029 NA Y NA
 7624038 7624039 SSUSC84_0755 SSUSC84_0756     TRUE 0.958 -3.000 0.012 NA   NA
 7624039 7624040 SSUSC84_0756 SSUSC84_0757   glyA TRUE 0.889 24.000 0.056 1.000   NA
 7624040 7624041 SSUSC84_0757 SSUSC84_0758 glyA   TRUE 0.977 0.000 0.103 NA   NA
 7624041 7624042 SSUSC84_0758 SSUSC84_0759     TRUE 0.978 1.000 0.128 NA   NA
 7624042 7624043 SSUSC84_0759 SSUSC84_0760     FALSE 0.175 101.000 0.000 NA   NA
 7624043 7624044 SSUSC84_0760 SSUSC84_0761     TRUE 0.806 17.000 0.000 NA   NA
 7624044 7624045 SSUSC84_0761 SSUSC84_0762     TRUE 0.746 22.000 0.000 NA   NA
 7624046 7624047 SSUSC84_0763 SSUSC84_0764     FALSE 0.147 118.000 0.000 NA   NA
 7624048 7624049 SSUSC84_0765 SSUSC84_0766     TRUE 0.994 -3.000 0.490 NA   NA
 7624050 7624051 SSUSC84_0767 SSUSC84_0768     TRUE 0.868 -28.000 0.000 NA   NA
 7624051 7624052 SSUSC84_0768 SSUSC84_0769     TRUE 0.912 -7.000 0.000 NA   NA
 7624052 7624053 SSUSC84_0769 SSUSC84_0770     FALSE 0.023 528.000 0.000 NA   NA
 7624053 7624054 SSUSC84_0770 SSUSC84_0771     TRUE 0.684 28.000 0.000 NA   NA
 7624057 7624058 SSUSC84_0774 SSUSC84_0775     TRUE 0.811 16.000 0.000 NA   NA
 7624058 7624059 SSUSC84_0775 SSUSC84_0776     TRUE 0.806 17.000 0.000 NA   NA
 7624059 7624060 SSUSC84_0776 SSUSC84_0777     FALSE 0.112 155.000 0.000 NA   NA
 7624060 7624061 SSUSC84_0777 SSUSC84_0778     TRUE 0.993 -10.000 0.500 NA   NA
 7624063 7624064 SSUSC84_0780 SSUSC84_0781     TRUE 0.373 103.000 0.032 0.037   NA
 7624064 7624065 SSUSC84_0781 SSUSC84_0782   ffh TRUE 0.963 13.000 0.151 1.000   NA
 7624065 7624066 SSUSC84_0782 SSUSC84_0783 ffh   FALSE 0.128 194.000 0.002 NA   NA
 7624066 7624067 SSUSC84_0783 SSUSC84_0784     TRUE 0.982 4.000 0.250 NA   NA
 7624067 7624068 SSUSC84_0784 SSUSC84_0785     FALSE 0.294 65.000 0.000 NA   NA
 7624068 7624069 SSUSC84_0785 SSUSC84_0786     FALSE 0.020 651.000 0.000 NA   NA
 7624069 7624070 SSUSC84_0786 SSUSC84_0787     FALSE 0.034 361.000 0.000 NA   NA
 7624071 7624072 SSUSC84_0788 SSUSC84_0789     FALSE 0.118 76.000 0.000 1.000 N NA
 7624072 7624073 SSUSC84_0789 SSUSC84_0790     TRUE 0.999 -3.000 0.812 1.000 Y NA
 7624073 7624074 SSUSC84_0790 SSUSC84_0791     TRUE 0.405 39.000 0.000 NA N NA
 7624074 7624075 SSUSC84_0791 SSUSC84_0792     TRUE 0.989 -16.000 0.400 NA   NA
 7624075 7624076 SSUSC84_0792 SSUSC84_0793     FALSE 0.195 92.000 0.000 NA   NA
 7624076 7624077 SSUSC84_0793 SSUSC84_0794     TRUE 0.996 1.000 0.855 1.000   NA
 7624077 7624078 SSUSC84_0794 SSUSC84_0795     FALSE 0.126 136.000 0.000 NA   NA
 7624078 7624079 SSUSC84_0795 SSUSC84_0796     TRUE 0.978 2.000 0.143 NA   NA
 7624079 7624080 SSUSC84_0796 SSUSC84_0797     TRUE 0.997 2.000 1.000 NA   NA
 7624080 7624081 SSUSC84_0797 SSUSC84_0798     TRUE 0.758 21.000 0.000 NA   NA
 7624081 7624082 SSUSC84_0798 SSUSC84_0799     TRUE 0.824 13.000 0.000 NA   NA
 7624082 7624083 SSUSC84_0799 SSUSC84_0800     FALSE 0.123 140.000 0.000 NA   NA
 7624083 7624084 SSUSC84_0800 SSUSC84_0801     TRUE 0.949 18.000 0.130 NA   NA
 7624084 7624085 SSUSC84_0801 SSUSC84_0802     TRUE 0.865 31.000 0.059 NA   NA
 7624085 7624086 SSUSC84_0802 SSUSC84_0803     FALSE 0.153 114.000 0.000 NA   NA
 7624086 7624087 SSUSC84_0803 SSUSC84_0804     FALSE 0.294 65.000 0.000 NA   NA
 7624087 7624088 SSUSC84_0804 SSUSC84_0805     FALSE 0.243 74.000 0.000 1.000   NA
 7624088 7624089 SSUSC84_0805 SSUSC84_0806     FALSE 0.080 196.000 0.000 1.000   NA
 7624089 7624090 SSUSC84_0806 SSUSC84_0807     FALSE 0.090 185.000 0.000 1.000   NA
 7624090 7624091 SSUSC84_0807 SSUSC84_0808     TRUE 0.954 23.000 0.222 NA   NA
 7624091 7624092 SSUSC84_0808 SSUSC84_0809     FALSE 0.052 279.000 0.000 NA   NA
 7624092 7624093 SSUSC84_0809 SSUSC84_0810     FALSE 0.039 330.000 0.000 1.000   NA
 7624093 7624094 SSUSC84_0810 SSUSC84_0811     TRUE 0.998 -15.000 0.741 0.012 Y NA
 7624094 7624095 SSUSC84_0811 SSUSC84_0812     TRUE 0.861 31.000 0.056 NA   NA
 7624095 7624096 SSUSC84_0812 SSUSC84_0813     TRUE 0.996 -3.000 0.667 NA   NA
 7624096 7624097 SSUSC84_0813 SSUSC84_0814     TRUE 0.993 -7.000 0.462 NA   NA
 7624097 7624098 SSUSC84_0814 SSUSC84_0815     TRUE 0.980 21.000 0.154 1.000 Y NA
 7624098 7624099 SSUSC84_0815 SSUSC84_0816     TRUE 0.961 4.000 0.087 1.000   NA
 7624099 7624100 SSUSC84_0816 SSUSC84_0817     TRUE 0.960 12.000 0.130 1.000   NA
 7624100 7624101 SSUSC84_0817 SSUSC84_0818     FALSE 0.068 221.000 0.000 NA   NA
 7624101 7624102 SSUSC84_0818 SSUSC84_0819     FALSE 0.020 685.000 0.000 NA   NA
 7624102 7624103 SSUSC84_0819 SSUSC84_0820     TRUE 0.894 -13.000 0.000 NA   NA
 7624103 7624104 SSUSC84_0820 SSUSC84_0821     TRUE 0.910 0.000 0.000 NA   NA
 7624104 7624105 SSUSC84_0821 SSUSC84_0823     FALSE 0.018 1383.000 0.000 NA   NA
 7624105 7624106 SSUSC84_0823 SSUSC84_0824     FALSE 0.213 82.000 0.000 NA   NA
 7624106 7624107 SSUSC84_0824 SSUSC84_0824a     FALSE 0.025 461.000 0.000 NA   NA
 7624107 7624108 SSUSC84_0824a SSUSC84_0825     TRUE 0.916 -3.000 0.000 NA   NA
 7624110 7624111 SSUSC84_0827 SSUSC84_0828 tetM   FALSE 0.031 377.000 0.000 NA   NA
 7624111 7624112 SSUSC84_0828 SSUSC84_0829     TRUE 0.916 -3.000 0.000 NA   NA
 7624112 7624113 SSUSC84_0829 SSUSC84_0830     TRUE 0.916 -3.000 0.000 NA   NA
 7624113 7624114 SSUSC84_0830 SSUSC84_0831     TRUE 0.880 3.000 0.000 NA   NA
 7624114 7624115 SSUSC84_0831 SSUSC84_0832     TRUE 0.884 -16.000 0.000 NA   NA
 7624115 7624116 SSUSC84_0832 SSUSC84_0833     TRUE 0.871 -25.000 0.000 NA   NA
 7624116 7624117 SSUSC84_0833 SSUSC84_0834     FALSE 0.149 117.000 0.000 NA   NA
 7624117 7624118 SSUSC84_0834 SSUSC84_0835     TRUE 0.563 43.000 0.000 NA   NA
 7624118 7624119 SSUSC84_0835 SSUSC84_0836     FALSE 0.096 178.000 0.000 1.000   NA
 7624119 7624120 SSUSC84_0836 SSUSC84_0837     TRUE 0.678 29.000 0.000 NA   NA
 7624120 7624121 SSUSC84_0837 SSUSC84_0838     TRUE 0.781 19.000 0.000 NA   NA
 7624121 7624122 SSUSC84_0838 SSUSC84_0839     FALSE 0.019 756.000 0.000 NA   NA
 7624122 7624123 SSUSC84_0839 SSUSC84_0840     TRUE 0.996 -13.000 0.415 NA Y NA
 7624123 7624124 SSUSC84_0840 SSUSC84_0841     TRUE 0.916 -3.000 0.000 NA   NA
 7624124 7624125 SSUSC84_0841 SSUSC84_0842     TRUE 0.975 0.000 0.095 1.000   NA
 7624125 7624126 SSUSC84_0842 SSUSC84_0843     FALSE 0.267 70.000 0.000 NA   NA
 7624126 7624127 SSUSC84_0843 SSUSC84_0844     TRUE 0.894 -13.000 0.000 NA   NA
 7624127 7624128 SSUSC84_0844 SSUSC84_0845     TRUE 0.916 -3.000 0.000 NA   NA
 7624128 7624129 SSUSC84_0845 SSUSC84_0846     TRUE 0.416 54.000 0.000 NA   NA
 7624129 7624130 SSUSC84_0846 SSUSC84_0847     TRUE 0.609 39.000 0.000 NA   NA
 7624132 7624133 SSUSC84_0849 SSUSC84_0850 salR salK TRUE 0.997 -22.000 0.704 NA Y NA
 7624133 10784647 SSUSC84_0850 SSUSC84_0851 salK   TRUE 0.864 -398.000 0.000 NA   NA
 10784647 7624134 SSUSC84_0851 SSUSC84_0852     TRUE 0.811 16.000 0.000 NA   NA
 7624134 7624135 SSUSC84_0852 SSUSC84_0853     TRUE 0.836 10.000 0.000 NA   NA
 7624135 7624136 SSUSC84_0853 SSUSC84_0854     TRUE 0.993 -22.000 0.667 NA   NA
 7624136 7624137 SSUSC84_0854 SSUSC84_0855     TRUE 0.963 -28.000 0.000 1.000 Y NA
 7624138 7624139 SSUSC84_0857 SSUSC84_0858     TRUE 0.903 1.000 0.000 NA   NA
 7624139 7624140 SSUSC84_0858 SSUSC84_0859     TRUE 0.992 2.000 0.500 NA   NA
 7624140 7624141 SSUSC84_0859 SSUSC84_0860     TRUE 0.418 143.000 0.143 1.000   NA
 7624141 7624142 SSUSC84_0860 SSUSC84_0861     TRUE 0.816 15.000 0.000 1.000   NA
 7624142 7624143 SSUSC84_0861 SSUSC84_0862     TRUE 0.974 -19.000 0.143 1.000   NA
 7624143 7624144 SSUSC84_0862 SSUSC84_0863   aadE TRUE 0.897 33.000 0.125 NA   NA
 7624144 7624145 SSUSC84_0863 SSUSC84_0864 aadE   TRUE 0.548 44.000 0.000 NA   NA
 7624145 7624146 SSUSC84_0864 SSUSC84_0865     FALSE 0.066 228.000 0.000 1.000   NA
 7624147 7624148 SSUSC84_0866 SSUSC84_0868     FALSE 0.036 341.000 0.000 NA   NA
 7624148 7624149 SSUSC84_0868 SSUSC84_0869     TRUE 0.994 14.000 1.000 NA   NA
 7624149 7624150 SSUSC84_0869 SSUSC84_0870     TRUE 0.877 71.000 0.667 NA   NA
 7624150 7624151 SSUSC84_0870 SSUSC84_0871     TRUE 0.902 50.000 0.333 NA   NA
 7624151 7624152 SSUSC84_0871 SSUSC84_0872     TRUE 0.884 -16.000 0.000 NA   NA
 7624152 7624153 SSUSC84_0872 SSUSC84_0873     TRUE 0.903 1.000 0.000 NA   NA
 7624154 7624155 SSUSC84_0874 SSUSC84_0875     TRUE 0.972 -3.000 0.061 NA   NA
 7624156 7624157 SSUSC84_0876 SSUSC84_0877     TRUE 0.994 2.000 0.667 NA   NA
 7624157 7624158 SSUSC84_0877 SSUSC84_0878     TRUE 0.874 -22.000 0.000 NA   NA
 7624158 7624159 SSUSC84_0878 SSUSC84_0879     FALSE 0.323 62.000 0.000 NA   NA
 7624159 7624160 SSUSC84_0879 SSUSC84_0880     TRUE 0.781 19.000 0.000 NA   NA
 7624160 7624161 SSUSC84_0880 SSUSC84_0881     TRUE 0.795 18.000 0.000 NA   NA
 7624161 7624162 SSUSC84_0881 SSUSC84_0882     TRUE 0.910 0.000 0.000 NA   NA
 7624162 7624163 SSUSC84_0882 SSUSC84_0883     FALSE 0.225 78.000 0.000 NA   NA
 7624163 7624164 SSUSC84_0883 SSUSC84_0884     TRUE 0.880 3.000 0.000 NA   NA
 7624164 7624165 SSUSC84_0884 SSUSC84_0885     TRUE 0.840 9.000 0.000 NA   NA
 7624165 7624166 SSUSC84_0885 SSUSC84_0886     TRUE 0.991 11.000 0.667 NA   NA
 7624166 7624167 SSUSC84_0886 SSUSC84_0887     TRUE 0.994 -16.000 0.667 NA   NA
 7624167 7624168 SSUSC84_0887 SSUSC84_0889     FALSE 0.118 149.000 0.000 NA   NA
 7624168 7624169 SSUSC84_0889 SSUSC84_0890     TRUE 0.916 -3.000 0.000 NA   NA
 7624169 7624170 SSUSC84_0890 SSUSC84_0891   rplL FALSE 0.078 199.000 0.000 NA   NA
 7624170 7624171 SSUSC84_0891 SSUSC84_0892 rplL rplJ TRUE 0.973 66.000 0.884 0.025 Y NA
 7624171 7624172 SSUSC84_0892 SSUSC84_0893 rplJ topA FALSE 0.010 577.000 0.000 1.000 N NA
 7624172 7624173 SSUSC84_0893 SSUSC84_0894 topA   TRUE 0.835 93.000 0.238 1.000 Y NA
 7624173 7624174 SSUSC84_0894 SSUSC84_0895   maa TRUE 0.498 59.000 0.005 1.000   NA
 7624174 7624175 SSUSC84_0895 SSUSC84_0896 maa   TRUE 0.838 11.000 0.000 NA   NA
 7624176 7624177 SSUSC84_0897 SSUSC84_0898     TRUE 0.985 -3.000 0.163 NA   NA
 7624177 7624178 SSUSC84_0898 SSUSC84_0899     FALSE 0.161 108.000 0.000 NA   NA
 7624178 7624179 SSUSC84_0899 SSUSC84_0900     TRUE 0.980 -10.000 0.146 NA   NA
 7624180 7624181 SSUSC84_0901 SSUSC84_0902   rnh TRUE 0.880 3.000 0.000 NA   NA
 7624181 7624182 SSUSC84_0902 SSUSC84_0903 rnh   TRUE 0.978 -13.000 0.148 1.000   NA
 7624182 7624183 SSUSC84_0903 SSUSC84_0904     FALSE 0.177 100.000 0.000 NA   NA
 7624183 7624184 SSUSC84_0904 SSUSC84_0905     TRUE 0.437 52.000 0.000 NA   NA
 7624184 7624185 SSUSC84_0905 SSUSC84_0906   sntC FALSE 0.254 52.000 0.000 NA N NA
 7624185 7624186 SSUSC84_0906 SSUSC84_0907 sntC pyrC TRUE 0.526 110.000 0.005 1.000 Y NA
 7624186 7624187 SSUSC84_0907 SSUSC84_0908 pyrC ung TRUE 0.614 40.000 0.009 1.000 N NA
 7624187 7624188 SSUSC84_0908 SSUSC84_0909 ung   TRUE 0.691 10.000 0.000 NA N NA
 7624188 7624189 SSUSC84_0909 SSUSC84_0910   pyrE FALSE 0.077 109.000 0.000 NA N NA
 7624189 7624190 SSUSC84_0910 SSUSC84_0911 pyrE   FALSE 0.198 138.000 0.004 1.000   NA
 7624190 7624191 SSUSC84_0911 SSUSC84_0912   pyrF TRUE 0.946 -7.000 0.003 1.000   NA
 7624191 7624192 SSUSC84_0912 SSUSC84_0913 pyrF pyrD TRUE 0.677 165.000 0.154 0.003 Y NA
 7624192 7624193 SSUSC84_0913 SSUSC84_0914 pyrD pyrK TRUE 0.985 10.000 0.592 1.000 N NA
 7624194 7624195 SSUSC84_0915 SSUSC84_0916   glgC FALSE 0.049 164.000 0.000 1.000 N NA
 7624195 7624196 SSUSC84_0916 SSUSC84_0917 glgC glgC TRUE 0.993 13.000 0.309 0.001 Y NA
 7624196 7624197 SSUSC84_0917 SSUSC84_0918 glgC glgA TRUE 0.989 9.000 0.163 1.000 Y NA
 7624197 7624198 SSUSC84_0918 SSUSC84_0919 glgA glgB TRUE 0.569 73.000 0.000 1.000 Y NA
 7624199 7624200 SSUSC84_0920 SSUSC84_0921     FALSE 0.342 172.000 0.000 0.002 Y NA
 7624200 7624201 SSUSC84_0921 SSUSC84_0922     FALSE 0.191 200.000 0.111 1.000 N NA
 7624201 7624202 SSUSC84_0922 SSUSC84_0923     TRUE 0.960 -7.000 0.021 1.000   NA
 7624202 7624203 SSUSC84_0923 SSUSC84_0924   zmpC FALSE 0.156 111.000 0.000 1.000   NA
 7624203 7624204 SSUSC84_0924 SSUSC84_0925 zmpC uvrB FALSE 0.099 173.000 0.000 NA   NA
 7624204 7624205 SSUSC84_0925 SSUSC84_0926 uvrB   TRUE 0.643 34.000 0.000 NA   NA
 7624205 7624206 SSUSC84_0926 SSUSC84_0927   uvrB TRUE 0.880 3.000 0.000 NA   NA
 7624207 7624208 SSUSC84_0928 SSUSC84_0929   glnQ1 TRUE 0.996 0.000 0.326 1.000 Y NA
 7624213 7624214 SSUSC84_0934 SSUSC84_0935   lacX FALSE 0.037 336.000 0.000 NA   NA
 7624214 7624215 SSUSC84_0935 SSUSC84_0936 lacX lacG TRUE 0.625 65.000 0.000 1.000 Y NA
 7624215 7624216 SSUSC84_0936 SSUSC84_0937 lacG lacE FALSE 0.203 245.000 0.000 1.000 Y NA
 7624216 7624217 SSUSC84_0937 SSUSC84_0938 lacE lacF TRUE 0.994 0.000 0.150 0.014 Y NA
 7624217 7624218 SSUSC84_0938 SSUSC84_0939 lacF lacT TRUE 0.942 32.000 0.250 1.000   NA
 7624218 7624219 SSUSC84_0939 SSUSC84_0940 lacT lacD FALSE 0.086 189.000 0.000 1.000   NA
 7624219 7624220 SSUSC84_0940 SSUSC84_0941 lacD lacC TRUE 0.895 2.000 0.000 NA   NA
 7624220 7624221 SSUSC84_0941 SSUSC84_0942 lacC lacB TRUE 0.836 10.000 0.000 NA   NA
 7624221 7624222 SSUSC84_0942 SSUSC84_0943 lacB lacA TRUE 0.913 27.000 0.000 0.001 Y NA
 7624222 7624223 SSUSC84_0943 SSUSC84_0944 lacA   TRUE 0.916 -3.000 0.000 NA   NA
 7624223 7624224 SSUSC84_0944 SSUSC84_0945   lacR TRUE 0.735 23.000 0.000 NA   NA
 7624225 7624226 SSUSC84_0946 SSUSC84_0947     FALSE 0.202 89.000 0.000 NA   NA
 7624226 7624227 SSUSC84_0947 SSUSC84_0948     FALSE 0.197 91.000 0.000 NA   NA
 7624228 7624229 SSUSC84_0949 SSUSC84_0950     FALSE 0.119 146.000 0.000 NA   NA
 7624231 7624232 SSUSC84_0952 SSUSC84_0953 mutY   FALSE 0.033 208.000 0.000 NA N NA
 7624232 7624233 SSUSC84_0953 SSUSC84_0954     TRUE 0.805 -10.000 0.000 NA N NA
 7624233 7624234 SSUSC84_0954 SSUSC84_0955     TRUE 0.999 -13.000 0.895 0.012 Y NA
 7624234 7624235 SSUSC84_0955 SSUSC84_0956   pta TRUE 0.789 2.000 0.000 1.000 N NA
 7624235 7624236 SSUSC84_0956 SSUSC84_0957 pta   TRUE 0.891 18.000 0.067 1.000 N NA
 7624236 7624237 SSUSC84_0957 SSUSC84_0958   ppnK TRUE 0.973 0.000 0.150 1.000 N NA
 7624237 7624238 SSUSC84_0958 SSUSC84_0959 ppnK   TRUE 0.994 -16.000 0.725 1.000   NA
 7624239 7624240 SSUSC84_0960 SSUSC84_0961   prsA2 TRUE 0.417 145.000 0.145 1.000   NA
 7624240 7624241 SSUSC84_0961 SSUSC84_0962 prsA2   TRUE 0.983 11.000 0.089 1.000 Y NA
 7624241 7624242 SSUSC84_0962 SSUSC84_0963     TRUE 0.981 2.000 0.166 NA   NA
 7624242 7624243 SSUSC84_0963 SSUSC84_0964     TRUE 0.969 2.000 0.083 NA   NA
 7624243 7624244 SSUSC84_0964 SSUSC84_0965   rex TRUE 0.512 135.000 0.214 NA   NA
 7624244 7624245 SSUSC84_0965 SSUSC84_0966 rex   TRUE 0.993 4.000 0.714 1.000   NA
 7624246 7624247 SSUSC84_0967 SSUSC84_0968 radC srtA FALSE 0.213 113.000 0.028 NA N NA
 7624247 7624248 SSUSC84_0968 SSUSC84_0969 srtA gyrA TRUE 0.872 7.000 0.013 NA N NA
 7624250 7624251 SSUSC84_0971 SSUSC84_0972     FALSE 0.120 144.000 0.000 NA   NA
 7624251 7624252 SSUSC84_0972 SSUSC84_0973     TRUE 0.995 2.000 0.720 0.030   NA
 7624252 7624253 SSUSC84_0973 SSUSC84_0974     TRUE 0.993 -7.000 0.438 1.000   NA
 7624253 7624254 SSUSC84_0974 SSUSC84_0975     FALSE 0.081 195.000 0.000 1.000   NA
 7624254 7624255 SSUSC84_0975 SSUSC84_0976   cdd FALSE 0.216 81.000 0.000 1.000   NA
 7624255 7624256 SSUSC84_0976 SSUSC84_0977 cdd deoC TRUE 0.987 -13.000 0.051 1.000 Y NA
 7624256 7624257 SSUSC84_0977 SSUSC84_0978 deoC deoA TRUE 0.981 16.000 0.106 1.000 Y NA
 7624257 7624258 SSUSC84_0978 SSUSC84_0979 deoA   TRUE 0.951 -3.000 0.044 1.000 N NA
 7624259 7624260 SSUSC84_0980 SSUSC84_0981 coaA rpsT FALSE 0.286 74.000 0.014 1.000 N NA
 7624261 7624262 SSUSC84_0982 SSUSC84_0983     FALSE 0.028 414.000 0.000 NA   NA
 7624262 7624263 SSUSC84_0983 SSUSC84_0984   ciaH FALSE 0.039 331.000 0.000 NA   NA
 7624263 7624264 SSUSC84_0984 SSUSC84_0985 ciaH ciaR TRUE 0.998 -7.000 0.606 1.000 Y NA
 7624264 7624265 SSUSC84_0985 SSUSC84_0986 ciaR   FALSE 0.084 191.000 0.000 NA   NA
 7624267 7624268 SSUSC84_0988 SSUSC84_0989 phoU pstB1 TRUE 0.986 29.000 0.413 NA Y NA
 7624268 7624269 SSUSC84_0989 SSUSC84_0990 pstB1 pstB2 TRUE 0.996 12.000 0.542 0.001 Y NA
 7624269 7624270 SSUSC84_0990 SSUSC84_0991 pstB2   TRUE 0.990 25.000 0.490 0.002 Y NA
 7624270 7624271 SSUSC84_0991 SSUSC84_0992   pstC TRUE 0.999 -10.000 0.907 0.002 Y NA
 7624271 7624272 SSUSC84_0992 SSUSC84_0993 pstC pstS TRUE 0.993 3.000 0.206 1.000 Y NA
 7624272 7624273 SSUSC84_0993 SSUSC84_0994 pstS   TRUE 0.482 138.000 0.303 NA N NA
 7624273 7624274 SSUSC84_0994 SSUSC84_0995     TRUE 0.981 0.000 0.229 NA N NA
 7624274 7624275 SSUSC84_0995 SSUSC84_0996     TRUE 0.990 -10.000 0.337 NA   NA
 7624275 7624276 SSUSC84_0996 SSUSC84_0997   spxA TRUE 0.964 15.000 0.169 NA   NA
 7624276 7624277 SSUSC84_0997 SSUSC84_0998 spxA   FALSE 0.240 75.000 0.000 1.000   NA
 7624277 7624278 SSUSC84_0998 SSUSC84_0999   ribC TRUE 0.912 -7.000 0.000 1.000   NA
 7624278 7624279 SSUSC84_0999 SSUSC84_1000 ribC truB TRUE 0.922 35.000 0.308 1.000 N NA
 7624279 7624280 SSUSC84_1000 SSUSC84_1001 truB   TRUE 0.469 50.000 0.000 NA   NA
 7624280 7624281 SSUSC84_1001 SSUSC84_1002     TRUE 0.691 27.000 0.000 NA   NA
 7624281 7624282 SSUSC84_1002 SSUSC84_1003     TRUE 0.916 -3.000 0.000 NA   NA
 7624283 7624284 SSUSC84_1005 SSUSC84_1006     TRUE 0.939 18.000 0.000 NA Y NA
 7624285 7624286 SSUSC84_1007 SSUSC84_1008     TRUE 0.849 7.000 0.000 NA   NA
 7624286 7624287 SSUSC84_1008 SSUSC84_1009     TRUE 0.795 18.000 0.000 NA   NA
 7624288 7624289 SSUSC84_1010 SSUSC84_1011   pepT TRUE 0.836 10.000 0.000 1.000   NA
 7624289 7624290 SSUSC84_1011 SSUSC84_1012 pepT   FALSE 0.134 128.000 0.000 NA   NA
 7624292 7624293 SSUSC84_1014 SSUSC84_1015     TRUE 0.916 -3.000 0.000 NA   NA
 7624293 7624294 SSUSC84_1015 SSUSC84_1016     TRUE 0.832 12.000 0.000 NA   NA
 7624294 7624295 SSUSC84_1016 SSUSC84_1017     TRUE 0.894 -13.000 0.000 NA   NA
 7624296 7624297 SSUSC84_1018 SSUSC84_1019     TRUE 0.869 20.000 0.012 NA   NA
 7624298 7624299 SSUSC84_1020 SSUSC84_1021     TRUE 0.867 4.000 0.000 NA   NA
 7624299 7624300 SSUSC84_1021 SSUSC84_1022     TRUE 0.377 57.000 0.000 NA   NA
 7624301 7624302 SSUSC84_1023 SSUSC84_1024   folK FALSE 0.267 51.000 0.000 1.000 N NA
 7624302 7624303 SSUSC84_1024 SSUSC84_1025 folK folQ TRUE 0.994 -3.000 0.142 1.000 Y NA
 7624303 7624304 SSUSC84_1025 SSUSC84_1026 folQ folP TRUE 0.992 -7.000 0.094 1.000 Y NA
 7624304 7624305 SSUSC84_1026 SSUSC84_1027 folP folE TRUE 0.982 9.000 0.073 1.000 Y NA
 7624307 7624308 SSUSC84_1029 SSUSC84_1030     TRUE 0.894 -13.000 0.000 NA   NA
 7624310 7624311 SSUSC84_1032 SSUSC84_1033   pheT TRUE 0.405 55.000 0.000 NA   NA
 7624311 7624312 SSUSC84_1033 SSUSC84_1034 pheT   TRUE 0.940 2.000 0.007 1.000   NA
 7624312 7624313 SSUSC84_1034 SSUSC84_1035   pheS FALSE 0.133 202.000 0.009 1.000   NA
 7624313 7624314 SSUSC84_1035 SSUSC84_1036 pheS   FALSE 0.011 456.000 0.000 1.000 N NA
 7624314 7624315 SSUSC84_1036 SSUSC84_1037     TRUE 0.990 11.000 0.182 0.002 Y NA
 7624315 7624316 SSUSC84_1037 SSUSC84_1038     TRUE 0.674 47.000 0.012 NA   NA
 7624316 7624317 SSUSC84_1038 SSUSC84_1039   kduD TRUE 0.964 0.000 0.035 NA   NA
 7624317 7624318 SSUSC84_1039 SSUSC84_1040 kduD uxuA TRUE 0.983 3.000 0.364 1.000 N NA
 7624318 7624319 SSUSC84_1040 SSUSC84_1041 uxuA uxaC TRUE 0.995 15.000 0.533 0.001 Y NA
 7624319 7624320 SSUSC84_1041 SSUSC84_1042 uxaC dgoA TRUE 0.997 2.000 0.467 1.000 Y NA
 7624320 7624321 SSUSC84_1042 SSUSC84_1043 dgoA   TRUE 0.674 123.000 0.583 1.000 N NA
 7624321 7624322 SSUSC84_1043 SSUSC84_1044   uidA TRUE 0.887 46.000 0.333 1.000 N NA
 7624322 7624323 SSUSC84_1044 SSUSC84_1045 uidA   TRUE 0.980 16.000 0.095 1.000 Y NA
 7624323 7624324 SSUSC84_1045 SSUSC84_1046     TRUE 0.984 56.000 1.000 NA Y NA
 7624324 7624325 SSUSC84_1046 SSUSC84_1047   endA TRUE 0.593 187.000 0.500 NA   NA
 7624325 7624326 SSUSC84_1047 SSUSC84_1048 endA epuA TRUE 0.880 30.000 0.079 NA   NA
 7624326 7624327 SSUSC84_1048 SSUSC84_1049 epuA murA1 TRUE 0.978 -7.000 0.110 NA   NA
 7624327 7624328 SSUSC84_1049 SSUSC84_1050 murA1   TRUE 0.959 24.000 0.279 NA   NA
 7624328 7624329 SSUSC84_1050 SSUSC84_1051   atpC TRUE 0.587 60.000 0.039 NA   NA
 7624329 7624330 SSUSC84_1051 SSUSC84_1052 atpC atpD TRUE 0.998 10.000 0.837 0.004 Y NA
 7624330 7624331 SSUSC84_1052 SSUSC84_1053 atpD atpG TRUE 0.996 20.000 0.724 0.004 Y NA
 7624331 7624332 SSUSC84_1053 SSUSC84_1054 atpG atpA TRUE 0.998 12.000 0.846 0.004 Y NA
 7624332 7624333 SSUSC84_1054 SSUSC84_1055 atpA atpH TRUE 0.996 22.000 0.864 0.004 Y NA
 7624333 7624334 SSUSC84_1055 SSUSC84_1056 atpH atpF TRUE 0.995 1.000 0.222 0.004 Y NA
 7624334 7624335 SSUSC84_1056 SSUSC84_1057 atpF atpB TRUE 0.973 18.000 0.032 0.005 Y NA
 7624335 7624336 SSUSC84_1057 SSUSC84_1058 atpB atpE TRUE 0.926 37.000 0.189 0.005   NA
 7624336 7624337 SSUSC84_1058 SSUSC84_1059 atpE yegS FALSE 0.125 137.000 0.000 1.000   NA
 7624337 7624338 SSUSC84_1059 SSUSC84_1060 yegS lig TRUE 0.863 11.000 0.013 1.000 N NA
 7624339 7624340 SSUSC84_1061 SSUSC84_1062     TRUE 0.997 -3.000 0.841 NA   NA
 7624340 7624341 SSUSC84_1062 SSUSC84_1063   zwf TRUE 0.420 79.000 0.032 NA   NA
 7624341 7624342 SSUSC84_1063 SSUSC84_1064 zwf   FALSE 0.035 200.000 0.000 NA N NA
 7624342 7624343 SSUSC84_1064 SSUSC84_1065     TRUE 0.788 2.000 0.000 NA N NA
 7624344 7624345 SSUSC84_1066 SSUSC84_1067 ftsY   TRUE 0.938 2.000 0.005 1.000   NA
 7624345 7624346 SSUSC84_1067 SSUSC84_1068     TRUE 0.919 -10.000 0.000 0.021   NA
 7624346 7624347 SSUSC84_1068 SSUSC84_1069   smc TRUE 0.916 -3.000 0.000 1.000   NA
 7624347 7624348 SSUSC84_1069 SSUSC84_1070 smc rnc TRUE 0.956 3.000 0.120 1.000 N NA
 7624350 7624351 SSUSC84_1072 SSUSC84_1073     TRUE 0.995 12.000 1.000 NA   NA
 7624351 7624352 SSUSC84_1073 SSUSC84_1074     FALSE 0.031 373.000 0.000 NA   NA
 7624354 7624355 SSUSC84_1076 SSUSC84_1077 pstI ptsH TRUE 0.993 5.000 0.240 0.013 Y NA
 7624355 7624356 SSUSC84_1077 SSUSC84_1078 ptsH icd FALSE 0.052 156.000 0.000 1.000 N NA
 7624356 7624357 SSUSC84_1078 SSUSC84_1079 icd citZ TRUE 0.991 3.000 0.140 1.000 Y NA
 7624357 7624358 SSUSC84_1079 SSUSC84_1080 citZ acnA TRUE 0.987 -3.000 0.013 1.000 Y NA
 7624359 7624360 SSUSC84_1081 SSUSC84_1082 nrdH   TRUE 0.956 33.000 0.562 1.000 N NA
 7624360 7624361 SSUSC84_1082 SSUSC84_1083     TRUE 0.522 46.000 0.000 NA   NA
 7624361 7624362 SSUSC84_1083 SSUSC84_1084     TRUE 0.691 27.000 0.000 NA   NA
 7624363 7624364 SSUSC84_1085 SSUSC84_1086     TRUE 0.788 97.000 0.562 NA   NA
 7624364 7624365 SSUSC84_1086 SSUSC84_1087   hylA FALSE 0.038 335.000 0.000 NA   NA
 7624365 7624366 SSUSC84_1087 SSUSC84_1088 hylA   FALSE 0.182 97.000 0.000 NA   NA
 7624366 7624367 SSUSC84_1088 SSUSC84_1089   agaD TRUE 0.838 7.000 0.002 NA N NA
 7624367 7624368 SSUSC84_1089 SSUSC84_1090 agaD agaW TRUE 0.999 -13.000 0.933 0.017 Y NA
 7624368 7624369 SSUSC84_1090 SSUSC84_1091 agaW agaV TRUE 0.997 19.000 0.933 0.017 Y NA
 7624369 7624370 SSUSC84_1091 SSUSC84_1092 agaV ugl TRUE 0.978 10.000 0.267 1.000   NA
 7624370 7624371 SSUSC84_1092 SSUSC84_1093 ugl   TRUE 0.967 12.000 0.160 1.000   NA
 7624371 7624372 SSUSC84_1093 SSUSC84_1094   kgdA FALSE 0.165 287.000 0.000 1.000 Y NA
 7624372 7624373 SSUSC84_1094 SSUSC84_1095 kgdA   TRUE 0.988 11.000 0.167 1.000 Y NA
 7624373 7624374 SSUSC84_1095 SSUSC84_1096     TRUE 0.979 17.000 0.094 1.000 Y NA
 7624374 7624375 SSUSC84_1096 SSUSC84_1097   idnO TRUE 0.791 51.000 0.197 1.000 N NA
 7624375 7624376 SSUSC84_1097 SSUSC84_1098 idnO   FALSE 0.008 1078.000 0.000 1.000 N NA
 7624376 7624377 SSUSC84_1098 SSUSC84_1099     FALSE 0.161 108.000 0.000 NA   NA
 7624377 7624378 SSUSC84_1099 SSUSC84_1100     TRUE 0.836 10.000 0.000 NA   NA
 7624378 7624379 SSUSC84_1100 SSUSC84_1101     TRUE 0.836 10.000 0.000 NA   NA
 7624379 7624380 SSUSC84_1101 SSUSC84_1102     TRUE 0.699 26.000 0.000 NA   NA
 7624380 7624381 SSUSC84_1102 SSUSC84_1103     TRUE 0.836 10.000 0.000 NA   NA
 7624381 7624382 SSUSC84_1103 SSUSC84_1104     TRUE 0.992 -3.000 0.362 NA   NA
 7624382 7624383 SSUSC84_1104 SSUSC84_1105     TRUE 0.921 13.000 0.029 NA   NA
 7624383 7624384 SSUSC84_1105 SSUSC84_1106     TRUE 0.904 -10.000 0.000 NA   NA
 7624384 7624385 SSUSC84_1106 SSUSC84_1107     TRUE 0.884 -16.000 0.000 NA   NA
 7624385 7624386 SSUSC84_1107 SSUSC84_1108     TRUE 0.643 34.000 0.000 NA   NA
 7624386 7624387 SSUSC84_1108 SSUSC84_1109   alaS FALSE 0.071 209.000 0.000 NA   NA
 7624387 7624388 SSUSC84_1109 SSUSC84_1110 alaS   FALSE 0.088 280.000 0.006 NA   NA
 7624388 7624389 SSUSC84_1110 SSUSC84_m0006     TRUE 0.845 8.000 0.000 NA   NA
 7624389 7624390 SSUSC84_m0006 SSUSC84_1111   prsA TRUE 0.816 15.000 0.000 NA   NA
 7624390 7624391 SSUSC84_1111 SSUSC84_1112 prsA   TRUE 0.523 61.000 0.016 1.000   NA
 7624391 7624392 SSUSC84_1112 SSUSC84_1113     FALSE 0.239 75.000 0.000 NA   NA
 7624392 7624393 SSUSC84_1113 SSUSC84_1114     TRUE 0.811 16.000 0.000 NA   NA
 7624393 7624394 SSUSC84_1114 SSUSC84_1115   pepB TRUE 0.895 2.000 0.000 NA   NA
 7624394 7624395 SSUSC84_1115 SSUSC84_1116 pepB   FALSE 0.321 231.000 0.204 NA   NA
 7624395 7624396 SSUSC84_1116 SSUSC84_1117   metG FALSE 0.306 64.000 0.000 NA   NA
 7624397 7624398 SSUSC84_1118 SSUSC84_1119   aroF1 FALSE 0.044 301.000 0.000 NA   NA
 7624398 7624399 SSUSC84_1119 SSUSC84_1120 aroF1 aroF2 TRUE 0.960 10.000 0.000 0.001 Y NA
 7624399 7624400 SSUSC84_1120 SSUSC84_1121 aroF2 aroE TRUE 0.814 46.000 0.000 1.000 Y NA
 7624400 7624401 SSUSC84_1121 SSUSC84_1122 aroE aroB TRUE 0.968 13.000 0.010 1.000 Y NA
 7624402 7624403 SSUSC84_1123 SSUSC84_1124     TRUE 0.836 10.000 0.000 1.000   NA
 7624403 7624404 SSUSC84_1124 SSUSC84_1125     TRUE 0.405 55.000 0.000 NA   NA
 7624404 7624405 SSUSC84_1125 SSUSC84_1126     TRUE 0.965 24.000 0.333 NA   NA
 7624405 7624406 SSUSC84_1126 SSUSC84_1127     FALSE 0.024 494.000 0.000 NA   NA
 7624406 7624407 SSUSC84_1127 SSUSC84_1128   lacD2 FALSE 0.173 102.000 0.000 NA   NA
 7624407 7624408 SSUSC84_1128 SSUSC84_1129 lacD2   TRUE 0.956 23.000 0.030 1.000 Y NA
 7624408 7624409 SSUSC84_1129 SSUSC84_1130     FALSE 0.056 263.000 0.000 NA   NA
 7624409 7624410 SSUSC84_1130 SSUSC84_1131   tyrA TRUE 0.941 10.000 0.058 NA   NA
 7624410 7624411 SSUSC84_1131 SSUSC84_1132 tyrA aroF TRUE 0.972 8.000 0.010 1.000 Y NA
 7624411 7624412 SSUSC84_1132 SSUSC84_1133 aroF aroD TRUE 0.968 4.000 0.000 0.003 Y NA
 7624412 7624413 SSUSC84_1133 SSUSC84_1134 aroD   TRUE 0.916 -3.000 0.000 NA   NA
 7624415 7624416 SSUSC84_1136 SSUSC84_1137   rplT FALSE 0.040 326.000 0.000 NA   NA
 7624416 7624417 SSUSC84_1137 SSUSC84_1138 rplT rpmI TRUE 0.992 44.000 0.928 0.024 Y NA
 7624417 7624418 SSUSC84_1138 SSUSC84_1139 rpmI infC TRUE 0.991 27.000 0.652 1.000 Y NA
 7624418 7624419 SSUSC84_1139 SSUSC84_1140 infC cmk FALSE 0.087 196.000 0.010 1.000 N NA
 7624419 7624420 SSUSC84_1140 SSUSC84_1141 cmk   TRUE 0.911 10.000 0.012 NA   NA
 7624422 7624423 SSUSC84_1143 SSUSC84_1144     FALSE 0.092 183.000 0.000 NA   NA
 7624423 7624424 SSUSC84_1144 SSUSC84_1145     TRUE 0.963 -10.000 0.041 NA   NA
 7624424 7624425 SSUSC84_1145 SSUSC84_1146     TRUE 0.994 0.000 0.568 NA   NA
 7624425 7624426 SSUSC84_1146 SSUSC84_1147     FALSE 0.168 104.000 0.000 NA   NA
 7624426 7624427 SSUSC84_1147 SSUSC84_1148     TRUE 0.979 0.000 0.000 0.012 Y NA
 7624427 7624428 SSUSC84_1148 SSUSC84_1149     TRUE 0.836 10.000 0.000 NA   NA
 7624428 7624429 SSUSC84_1149 SSUSC84_1150     TRUE 0.880 3.000 0.000 NA   NA
 7624429 7624430 SSUSC84_1150 SSUSC84_1151     TRUE 0.735 23.000 0.000 NA   NA
 7624430 7624431 SSUSC84_1151 SSUSC84_1152     TRUE 0.916 -3.000 0.000 NA   NA
 7624431 7624432 SSUSC84_1152 SSUSC84_1153     TRUE 0.653 33.000 0.000 NA   NA
 7624432 7624433 SSUSC84_1153 SSUSC84_1154     TRUE 0.578 21.000 0.000 NA N NA
 7624433 7624434 SSUSC84_1154 SSUSC84_1155     TRUE 0.962 0.000 0.094 1.000 N NA
 7624434 7624435 SSUSC84_1155 SSUSC84_1156     TRUE 0.995 3.000 0.289 NA Y NA
 7624435 7624436 SSUSC84_1156 SSUSC84_1157     TRUE 0.996 -3.000 0.289 NA Y NA
 7624438 7624439 SSUSC84_1159 SSUSC84_1160     TRUE 0.534 45.000 0.000 NA   NA
 7624439 7624440 SSUSC84_1160 SSUSC84_1161     TRUE 0.621 38.000 0.000 1.000   NA
 7624440 7624441 SSUSC84_1161 SSUSC84_1162   rmlD TRUE 0.806 17.000 0.000 1.000   NA
 7624441 7624442 SSUSC84_1162 SSUSC84_1163 rmlD rmlB TRUE 0.948 55.000 0.273 0.002 Y NA
 7624442 7624443 SSUSC84_1163 SSUSC84_1164 rmlB   FALSE 0.279 189.000 0.100 NA   NA
 7624443 7624444 SSUSC84_1164 SSUSC84_1165   rmlC TRUE 0.982 0.000 0.150 NA   NA
 7624444 7624445 SSUSC84_1165 SSUSC84_1166 rmlC rmlA TRUE 0.993 0.000 0.149 1.000 Y NA
 7624445 7624446 SSUSC84_1166 SSUSC84_1167 rmlA   FALSE 0.088 98.000 0.000 1.000 N NA
 7624446 7624447 SSUSC84_1167 SSUSC84_1168     FALSE 0.174 176.000 0.011 NA   NA
 7624447 7624448 SSUSC84_1168 SSUSC84_1169     TRUE 0.989 -10.000 0.283 NA   NA
 7624448 7624449 SSUSC84_1169 SSUSC84_1170     TRUE 0.945 2.000 0.012 NA   NA
 7624449 7624450 SSUSC84_1170 SSUSC84_1171   metA TRUE 0.877 10.000 0.021 NA N NA
 7624450 7624451 SSUSC84_1171 SSUSC84_1172 metA apt FALSE 0.178 104.000 0.009 1.000 N NA
 7624451 7624452 SSUSC84_1172 SSUSC84_1173 apt   FALSE 0.026 433.000 0.000 NA   NA
 7624452 7624453 SSUSC84_1173 SSUSC84_1174     TRUE 0.875 -21.000 0.000 NA   NA
 7624453 7624454 SSUSC84_1174 SSUSC84_1175     FALSE 0.052 156.000 0.000 1.000 N NA
 7624456 7624457 SSUSC84_1177 SSUSC84_1178   rnz TRUE 0.975 -3.000 0.074 1.000   NA
 7624457 7624458 SSUSC84_1178 SSUSC84_1179 rnz   TRUE 0.924 11.000 0.022 NA   NA
 7624458 7624459 SSUSC84_1179 SSUSC84_1180     TRUE 0.942 -16.000 0.014 NA   NA
 7624459 7624460 SSUSC84_1180 SSUSC84_1181   miaA TRUE 0.962 -7.000 0.027 1.000   NA
 7624464 7624465 SSUSC84_1185 SSUSC84_1186     TRUE 0.895 2.000 0.000 NA   NA
 7624465 7624466 SSUSC84_1186 SSUSC84_1187     FALSE 0.118 149.000 0.000 NA   NA
 7624466 7624467 SSUSC84_1187 SSUSC84_1188     FALSE 0.351 79.000 0.010 NA   NA
 7624467 7624468 SSUSC84_1188 SSUSC84_1189     TRUE 0.855 6.000 0.000 NA   NA
 7624468 7624469 SSUSC84_1189 SSUSC84_1190     TRUE 0.836 10.000 0.000 NA   NA
 7624469 7624470 SSUSC84_1190 SSUSC84_1191     TRUE 0.836 10.000 0.000 1.000   NA
 7624470 7624471 SSUSC84_1191 SSUSC84_1192   rrf FALSE 0.229 132.000 0.012 1.000   NA
 7624471 7624472 SSUSC84_1192 SSUSC84_1193 rrf pyrH TRUE 0.659 135.000 0.626 1.000 N NA
 7624472 7624473 SSUSC84_1193 SSUSC84_1194 pyrH   FALSE 0.101 170.000 0.000 1.000   NA
 7624473 7624474 SSUSC84_1194 SSUSC84_1195     FALSE 0.117 150.000 0.000 NA   NA
 7624474 7624475 SSUSC84_1195 SSUSC84_1196     TRUE 0.840 9.000 0.000 NA   NA
 7624475 7624476 SSUSC84_1196 SSUSC84_1197   rplA FALSE 0.164 107.000 0.000 NA   NA
 7624476 7624477 SSUSC84_1197 SSUSC84_1198 rplA rplK TRUE 0.991 41.000 0.838 0.031 Y NA
 7624479 7624480 SSUSC84_1200 SSUSC84_1201     TRUE 0.916 0.000 0.010 NA N NA
 7624480 7624481 SSUSC84_1201 SSUSC84_1202     FALSE 0.065 126.000 0.000 1.000 N NA
 7624481 7624482 SSUSC84_1202 SSUSC84_1203     TRUE 0.989 18.000 0.273 1.000 Y NA
 7624482 7624483 SSUSC84_1203 SSUSC84_1204     TRUE 0.986 47.000 0.733 0.028 Y NA
 7624483 7624484 SSUSC84_1204 SSUSC84_1205     TRUE 0.998 10.000 0.933 0.028 Y NA
 7624484 7624485 SSUSC84_1205 SSUSC84_1206     TRUE 0.496 105.000 0.214 1.000 N NA
 7624485 7624486 SSUSC84_1206 SSUSC84_1207     FALSE 0.110 157.000 0.000 NA   NA
 7624486 7624487 SSUSC84_1207 SSUSC84_1208     TRUE 0.903 1.000 0.000 NA   NA
 7624487 7624488 SSUSC84_1208 SSUSC84_1209     FALSE 0.210 85.000 0.000 NA   NA
 7624489 7624490 SSUSC84_1210 SSUSC84_1211     FALSE 0.063 129.000 0.000 1.000 N NA
 7624493 7624494 SSUSC84_1214 SSUSC84_1215   murF TRUE 0.437 91.000 0.059 NA   NA
 7624494 7624495 SSUSC84_1215 SSUSC84_1216 murF   FALSE 0.134 129.000 0.000 1.000   NA
 7624495 7624496 SSUSC84_1216 SSUSC84_1217   ddlA FALSE 0.205 88.000 0.000 1.000   NA
 7624496 7624497 SSUSC84_1217 SSUSC84_1218 ddlA recR FALSE 0.183 105.000 0.010 1.000 N NA
 7624497 7624498 SSUSC84_1218 SSUSC84_1219 recR penA TRUE 0.864 9.000 0.013 1.000 N NA
 7624498 7624499 SSUSC84_1219 SSUSC84_1220 penA   FALSE 0.230 77.000 0.000 1.000   NA
 7624499 7624500 SSUSC84_1220 SSUSC84_1221     FALSE 0.121 166.000 0.000 0.029   NA
 7624500 7624501 SSUSC84_1221 SSUSC84_1222   vicX FALSE 0.024 519.000 0.000 1.000   NA
 7624501 7624502 SSUSC84_1222 SSUSC84_1223 vicX vicK TRUE 0.939 7.000 0.038 1.000   NA
 7624502 7624503 SSUSC84_1223 SSUSC84_1224 vicK vicR TRUE 0.998 -7.000 0.597 0.045 Y NA
 7624504 7624505 SSUSC84_1225 SSUSC84_1226 glnQ4   TRUE 0.989 11.000 0.185 1.000 Y NA
 7624505 7624506 SSUSC84_1226 SSUSC84_1227     TRUE 0.994 15.000 0.400 0.028 Y NA
 7624506 7624507 SSUSC84_1227 SSUSC84_1228     TRUE 0.998 15.000 0.947 0.010 Y NA
 7624508 7624509 SSUSC84_1229 SSUSC84_1230 thrS   TRUE 0.912 14.000 0.018 NA   NA
 7624509 7624510 SSUSC84_1230 SSUSC84_1231     FALSE 0.057 259.000 0.000 NA   NA
 7624510 7624511 SSUSC84_1231 SSUSC84_1232     TRUE 0.908 15.000 0.016 NA   NA
 7624511 7624512 SSUSC84_1232 SSUSC84_1233     TRUE 0.997 1.000 0.413 0.012 Y NA
 7624518 7624519 SSUSC84_1239 SSUSC84_1240     FALSE 0.144 120.000 0.000 NA   NA
 7624519 7624520 SSUSC84_1240 SSUSC84_1241   polA TRUE 0.894 -13.000 0.000 NA   NA
 7624520 7624521 SSUSC84_1241 SSUSC84_1242 polA   FALSE 0.234 76.000 0.000 NA   NA
 7624521 7624522 SSUSC84_1242 SSUSC84_1243     FALSE 0.115 152.000 0.000 NA   NA
 7624522 7624523 SSUSC84_1243 SSUSC84_1244     TRUE 0.952 12.000 0.000 1.000 Y NA
 7624523 7624524 SSUSC84_1244 SSUSC84_1245     FALSE 0.202 89.000 0.000 NA   NA
 7624524 7624525 SSUSC84_1245 SSUSC84_1246   tpx FALSE 0.188 95.000 0.000 NA   NA
 7624525 7624526 SSUSC84_1246 SSUSC84_1247 tpx copA TRUE 0.392 40.000 0.000 1.000 N NA
 7624526 7624527 SSUSC84_1247 SSUSC84_1248 copA   FALSE 0.017 331.000 0.000 1.000 N NA
 7624527 7624528 SSUSC84_1248 SSUSC84_1249     FALSE 0.163 194.000 0.071 1.000 N NA
 7624530 7624531 SSUSC84_1251 SSUSC84_1252 smpB rnr TRUE 0.966 3.000 0.143 0.028 N NA
 7624531 7624532 SSUSC84_1252 SSUSC84_1253 rnr secG FALSE 0.054 432.000 0.064 1.000 N NA
 7624532 7624533 SSUSC84_1253 SSUSC84_1254 secG rpmGB TRUE 0.544 47.000 0.012 1.000 N NA
 7624533 7624534 SSUSC84_1254 SSUSC84_1255 rpmGB pmrA TRUE 0.923 0.000 0.012 1.000 N NA
 7624534 7624535 SSUSC84_1255 SSUSC84_1256 pmrA coaE TRUE 0.897 -13.000 0.007 1.000 N NA
 7624535 7624536 SSUSC84_1256 SSUSC84_1257 coaE fpg TRUE 0.956 -7.000 0.066 1.000 N NA
 7624536 7624537 SSUSC84_1257 SSUSC84_1258 fpg era FALSE 0.036 613.000 0.004 1.000   NA
 7624537 7624538 SSUSC84_1258 SSUSC84_1259 era dgk TRUE 0.931 17.000 0.063 1.000   NA
 7624538 7624539 SSUSC84_1259 SSUSC84_1260 dgk   TRUE 0.950 -19.000 0.035 NA   NA
 7624541 7624542 SSUSC84_1262 SSUSC84_1263     TRUE 0.968 28.000 0.132 1.000 Y NA
 7624542 7624543 SSUSC84_1263 SSUSC84_1264   sly FALSE 0.042 311.000 0.000 1.000   NA
 7624543 7624544 SSUSC84_1264 SSUSC84_1265 sly   FALSE 0.021 590.000 0.000 1.000   NA
 7624544 7624545 SSUSC84_1265 SSUSC84_1266     TRUE 0.417 54.000 0.000 1.000   NA
 7624545 7624546 SSUSC84_1266 SSUSC84_1267     TRUE 0.999 0.000 0.844 0.011 Y NA
 7624546 7624547 SSUSC84_1267 SSUSC84_t0048     FALSE 0.024 470.000 0.000 NA   NA
 7624548 7624549 SSUSC84_1268 SSUSC84_1269     TRUE 0.999 -3.000 0.871 1.000 Y NA
 7624550 7624551 SSUSC84_1270 SSUSC84_1271 ftsX ftsE TRUE 0.996 -16.000 0.431 1.000 Y NA
 7624551 7624552 SSUSC84_1271 SSUSC84_1272 ftsE prfB FALSE 0.206 143.000 0.053 1.000 N NA
 7624552 7624553 SSUSC84_1272 SSUSC84_1273 prfB   TRUE 0.641 35.000 0.006 1.000 N NA
 7624553 7624554 SSUSC84_1273 SSUSC84_1274     TRUE 0.582 41.000 0.000 NA   NA
 7624554 7624555 SSUSC84_1274 SSUSC84_1275     FALSE 0.101 170.000 0.000 NA   NA
 7624556 7624557 SSUSC84_1276 SSUSC84_1277     FALSE 0.173 102.000 0.000 NA   NA
 7624558 7624559 SSUSC84_1278 SSUSC84_m0007     TRUE 0.405 55.000 0.000 NA   NA
 7624561 7624562 SSUSC84_t0049 SSUSC84_m0008   ssrA TRUE 0.855 6.000 0.000 NA   NA
 7624566 7624567 SSUSC84_1283 SSUSC84_1284   rpoD FALSE 0.245 169.000 0.044 NA   NA
 7624567 7624568 SSUSC84_1284 SSUSC84_1285 rpoD dnaG TRUE 0.972 3.000 0.209 1.000 N NA
 7624570 7624571 SSUSC84_1287 SSUSC84_1288 galE rpsU FALSE 0.169 104.000 0.000 1.000   NA
 7624571 7624572 SSUSC84_1288 SSUSC84_1289 rpsU   FALSE 0.179 99.000 0.000 NA   NA
 7624572 7624573 SSUSC84_1289 SSUSC84_1290     TRUE 0.990 -10.000 0.330 NA   NA
 7624573 7624574 SSUSC84_1290 SSUSC84_1291     TRUE 0.879 10.000 0.023 1.000 N NA
 7624574 7624575 SSUSC84_1291 SSUSC84_1292     TRUE 0.917 -13.000 0.015 1.000 N NA
 7624575 7624576 SSUSC84_1292 SSUSC84_1293   hemN FALSE 0.121 231.000 0.060 1.000 N NA
 7624578 7624579 SSUSC84_1295 SSUSC84_1296 glgP deoD FALSE 0.098 175.000 0.000 NA   NA
 7624579 7624580 SSUSC84_1296 SSUSC84_1297 deoD punA TRUE 0.948 33.000 0.040 0.001 Y NA
 7624580 7624581 SSUSC84_1297 SSUSC84_1298 punA   TRUE 0.686 12.000 0.000 1.000 N NA
 7624581 7624582 SSUSC84_1298 SSUSC84_1299   deoB TRUE 0.816 0.000 0.000 1.000 N NA
 7624582 7624583 SSUSC84_1299 SSUSC84_1300 deoB rpiA FALSE 0.227 329.000 0.018 1.000 Y NA
 7624585 7624586 SSUSC84_1302 SSUSC84_1303     TRUE 0.990 0.000 0.045 0.055 Y NA
 7624586 7624587 SSUSC84_1303 SSUSC84_1304     TRUE 0.996 13.000 0.564 0.055 Y NA
 7624588 7624589 SSUSC84_1305 SSUSC84_1306 trmE   FALSE 0.191 94.000 0.000 NA   NA
 7624590 7624591 SSUSC84_1307 SSUSC84_1308     FALSE 0.202 89.000 0.000 NA   NA
 7624591 7624592 SSUSC84_1308 SSUSC84_1309     TRUE 0.832 12.000 0.000 NA   NA
 7624592 7624593 SSUSC84_1309 SSUSC84_1310     FALSE 0.248 73.000 0.000 NA   NA
 7624593 7624594 SSUSC84_1310 SSUSC84_1311     FALSE 0.255 72.000 0.000 NA   NA
 7624594 7624595 SSUSC84_1311 SSUSC84_1312     TRUE 0.894 -13.000 0.000 NA   NA
 7624595 7624596 SSUSC84_1312 SSUSC84_1313   pepV TRUE 0.583 41.000 0.000 1.000   NA
 7624596 7624597 SSUSC84_1313 SSUSC84_1314 pepV   TRUE 0.459 101.000 0.000 1.000 Y NA
 7624597 7624598 SSUSC84_1314 SSUSC84_1315     FALSE 0.032 371.000 0.000 1.000   NA
 7624598 7624599 SSUSC84_1315 SSUSC84_1316     TRUE 0.595 40.000 0.000 NA   NA
 7624599 7624600 SSUSC84_1316 SSUSC84_1317     TRUE 0.632 36.000 0.000 NA   NA
 7624600 7624601 SSUSC84_1317 SSUSC84_1318     FALSE 0.116 151.000 0.000 NA   NA
 7624601 7624602 SSUSC84_1318 SSUSC84_1319     FALSE 0.131 131.000 0.000 1.000   NA
 7624602 7624603 SSUSC84_1319 SSUSC84_1320     FALSE 0.105 164.000 0.000 1.000   NA
 7624603 7624604 SSUSC84_1320 SSUSC84_1321     TRUE 0.962 13.000 0.150 NA   NA
 7624604 7624605 SSUSC84_1321 SSUSC84_1322     TRUE 0.994 -7.000 0.502 NA   NA
 7624606 7624607 SSUSC84_1323 SSUSC84_1324     TRUE 0.996 0.000 0.796 1.000   NA
 7624608 7624609 SSUSC84_1325 SSUSC84_1326     TRUE 0.895 2.000 0.000 1.000   NA
 7624609 7624610 SSUSC84_1326 SSUSC84_1327     FALSE 0.045 296.000 0.000 NA   NA
 7624610 7624611 SSUSC84_1327 SSUSC84_1328     TRUE 0.508 47.000 0.000 NA   NA
 7624611 7624612 SSUSC84_1328 SSUSC84_1329     FALSE 0.326 101.000 0.019 NA   NA
 7624612 7624613 SSUSC84_1329 SSUSC84_1330     TRUE 0.961 11.000 0.130 NA   NA
 7624613 7624614 SSUSC84_1330 SSUSC84_1331     TRUE 0.743 66.000 0.217 NA   NA
 7624614 7624615 SSUSC84_1331 SSUSC84_1332     TRUE 0.684 65.000 0.143 NA   NA
 7624615 7624616 SSUSC84_1332 SSUSC84_1333     FALSE 0.030 390.000 0.000 NA   NA
 7624616 7624617 SSUSC84_1333 SSUSC84_1334     TRUE 0.855 6.000 0.000 NA   NA
 7624617 7624618 SSUSC84_1334 SSUSC84_1335     FALSE 0.092 183.000 0.000 NA   NA
 7624618 7624619 SSUSC84_1335 SSUSC84_1336     TRUE 0.997 -3.000 0.895 1.000   NA
 7624619 7624620 SSUSC84_1336 SSUSC84_1337     TRUE 0.969 23.000 0.368 NA   NA
 7624620 7624621 SSUSC84_1337 SSUSC84_1338     FALSE 0.019 757.000 0.000 NA   NA
 7624621 7624622 SSUSC84_1338 SSUSC84_1339     TRUE 0.992 15.000 0.318 1.000 Y NA
 7624622 7624623 SSUSC84_1339 SSUSC84_1340     TRUE 0.978 11.000 0.259 1.000   NA
 7624625 7624626 SSUSC84_1342 SSUSC84_1343 aldB   TRUE 0.976 4.000 0.182 1.000   NA
 7624626 7624627 SSUSC84_1343 SSUSC84_1344     TRUE 0.990 -10.000 0.324 NA   NA
 7624628 7624629 SSUSC84_1345 SSUSC84_1346     TRUE 0.822 64.000 0.333 NA   NA
 7624630 7624631 SSUSC84_1347 SSUSC84_1348     FALSE 0.103 167.000 0.000 NA   NA
 7624631 7624632 SSUSC84_1348 SSUSC84_1349     TRUE 0.988 2.000 0.308 NA   NA
 7624632 7624633 SSUSC84_1349 SSUSC84_1350   eno FALSE 0.042 310.000 0.000 NA   NA
 7624637 7624638 SSUSC84_1354 SSUSC84_1355     FALSE 0.024 274.000 0.000 1.000 N NA
 7624638 7624639 SSUSC84_1355 SSUSC84_1356   ezrA TRUE 0.453 52.000 0.009 1.000 N NA
 7624639 7624640 SSUSC84_1356 SSUSC84_1357 ezrA gyrB FALSE 0.224 89.000 0.011 1.000 N NA
 7624640 7624641 SSUSC84_1357 SSUSC84_1358 gyrB   FALSE 0.092 182.000 0.000 NA   NA
 7624641 7624642 SSUSC84_1358 SSUSC84_1359     TRUE 0.820 14.000 0.000 NA   NA
 7624642 7624643 SSUSC84_1359 SSUSC84_1360     FALSE 0.018 1464.000 0.000 1.000   NA
 7624643 7624644 SSUSC84_1360 SSUSC84_1361     TRUE 0.894 -13.000 0.000 NA   NA
 7624644 7624645 SSUSC84_1361 SSUSC84_1362     FALSE 0.046 289.000 0.000 NA   NA
 7624645 7624646 SSUSC84_1362 SSUSC84_1363     TRUE 0.982 15.000 0.400 NA   NA
 7624646 7624647 SSUSC84_1363 SSUSC84_1364     TRUE 0.912 -7.000 0.000 NA   NA
 7624647 7624648 SSUSC84_1364 SSUSC84_1365     TRUE 0.832 12.000 0.000 NA   NA
 7624648 7624649 SSUSC84_1365 SSUSC84_1366     TRUE 0.758 21.000 0.000 NA   NA
 7624649 7624650 SSUSC84_1366 SSUSC84_1367     FALSE 0.035 354.000 0.000 NA   NA
 7624650 7624651 SSUSC84_1367 SSUSC84_1368     FALSE 0.129 132.000 0.000 NA   NA
 7624651 7624652 SSUSC84_1368 SSUSC84_1369     TRUE 0.832 12.000 0.000 NA   NA
 7624652 7624653 SSUSC84_1369 SSUSC84_1370     TRUE 0.894 -13.000 0.000 NA   NA
 7624653 7624654 SSUSC84_1370 SSUSC84_1371     TRUE 0.916 -3.000 0.000 NA   NA
 7624654 7624655 SSUSC84_1371 SSUSC84_1372     TRUE 0.916 -3.000 0.000 NA   NA
 7624655 7624656 SSUSC84_1372 SSUSC84_1373     TRUE 0.904 -10.000 0.000 NA   NA
 7624656 7624657 SSUSC84_1373 SSUSC84_1374     FALSE 0.045 297.000 0.000 NA   NA
 7624658 7624659 SSUSC84_1375 SSUSC84_1376     TRUE 0.390 56.000 0.000 NA   NA
 7624659 7624660 SSUSC84_1376 SSUSC84_1377     FALSE 0.020 687.000 0.000 NA   NA
 7624661 7624662 SSUSC84_1378 SSUSC84_1379 rpmE   FALSE 0.139 119.000 0.004 1.000 N NA
 7624662 7624663 SSUSC84_1379 SSUSC84_1380     TRUE 0.895 -13.000 0.000 1.000   NA
 7624664 7624665 SSUSC84_1381 SSUSC84_1382   rpsN FALSE 0.058 142.000 0.000 1.000 N NA
 7624665 7624666 SSUSC84_1382 SSUSC84_1383 rpsN   FALSE 0.106 82.000 0.000 1.000 N NA
 7624666 7624667 SSUSC84_1383 SSUSC84_1384     TRUE 0.959 -10.000 0.094 1.000 N NA
 7624668 7624669 SSUSC84_t0050 SSUSC84_1385     FALSE 0.079 196.000 0.000 NA   NA
 7624669 7624670 SSUSC84_1385 SSUSC84_1386   sodA FALSE 0.026 262.000 0.000 1.000 N NA
 7624670 7624671 SSUSC84_1386 SSUSC84_1387 sodA   FALSE 0.179 113.000 0.012 1.000 N NA
 7624671 7624672 SSUSC84_1387 SSUSC84_1388     FALSE 0.116 151.000 0.000 NA   NA
 7624672 7624673 SSUSC84_1388 SSUSC84_1389     FALSE 0.161 108.000 0.000 NA   NA
 7624673 7624674 SSUSC84_1389 SSUSC84_1390     FALSE 0.027 430.000 0.000 NA   NA
 7624674 7624675 SSUSC84_1390 SSUSC84_1391     TRUE 0.993 0.000 0.128 0.028 Y NA
 7624675 7624676 SSUSC84_1391 SSUSC84_1392     TRUE 0.997 0.000 0.349 1.000 Y NA
 7624676 7624677 SSUSC84_1392 SSUSC84_1393     TRUE 0.996 3.000 0.363 0.027 Y NA
 7624677 7624678 SSUSC84_1393 SSUSC84_1394     TRUE 0.532 216.000 0.150 1.000 Y NA
 7624678 7624679 SSUSC84_1394 SSUSC84_1395     TRUE 0.393 131.000 0.109 NA   NA
 7624679 7624680 SSUSC84_1395 SSUSC84_1396   clpP FALSE 0.341 127.000 0.065 NA   NA
 7624680 7624681 SSUSC84_1396 SSUSC84_1397 clpP upp FALSE 0.160 117.000 0.010 1.000 N NA
 7624681 7624682 SSUSC84_1397 SSUSC84_1398 upp dexB FALSE 0.109 80.000 0.000 1.000 N NA
 7624682 7624683 SSUSC84_1398 SSUSC84_1399 dexB   TRUE 0.603 73.000 0.000 0.009 Y NA
 7624683 7624684 SSUSC84_1399 SSUSC84_1400   msmG TRUE 0.585 71.000 0.000 1.000 Y NA
 7624684 7624685 SSUSC84_1400 SSUSC84_1401 msmG msmF TRUE 0.998 11.000 0.925 0.027 Y NA
 7624685 7624686 SSUSC84_1401 SSUSC84_1402 msmF msmE TRUE 0.794 132.000 0.275 0.027 Y NA
 7624686 7624687 SSUSC84_1402 SSUSC84_1403 msmE aga TRUE 0.991 13.000 0.286 1.000 Y NA
 7624689 7624690 SSUSC84_1405 SSUSC84_1406     TRUE 0.987 4.000 0.082 0.010 Y NA
 7624691 7624692 SSUSC84_1407 SSUSC84_1408     TRUE 0.820 14.000 0.000 NA   NA
 7624692 7624693 SSUSC84_1408 SSUSC84_1409     TRUE 0.836 10.000 0.000 NA   NA
 7624693 7624694 SSUSC84_1409 SSUSC84_1410     FALSE 0.066 228.000 0.000 NA   NA
 7624694 7624695 SSUSC84_1410 SSUSC84_1411     TRUE 0.985 -10.000 0.209 1.000   NA
 7624695 7624696 SSUSC84_1411 SSUSC84_1412     TRUE 0.904 -10.000 0.000 1.000   NA
 7624697 7624698 SSUSC84_1413 SSUSC84_1414     FALSE 0.128 133.000 0.000 1.000   NA
 7624698 7624699 SSUSC84_1414 SSUSC84_1415     FALSE 0.155 112.000 0.000 NA   NA
 7624699 7624700 SSUSC84_1415 SSUSC84_1416     TRUE 0.894 -13.000 0.000 NA   NA
 7624700 7624701 SSUSC84_1416 SSUSC84_1417     TRUE 0.352 145.000 0.000 1.000 Y NA
 7624701 7624702 SSUSC84_1417 SSUSC84_1418     FALSE 0.026 433.000 0.000 NA   NA
 7624702 7624703 SSUSC84_1418 SSUSC84_1419     FALSE 0.225 78.000 0.000 NA   NA
 7624703 7624704 SSUSC84_1419 SSUSC84_1420     FALSE 0.197 91.000 0.000 NA   NA
 7624706 7624707 SSUSC84_1422 SSUSC84_1423     TRUE 0.982 -3.000 0.142 NA   NA
 7624707 7624708 SSUSC84_1423 SSUSC84_1424   mtnN FALSE 0.036 199.000 0.000 1.000 N NA
 7624708 7624709 SSUSC84_1424 SSUSC84_1425 mtnN   TRUE 0.937 9.000 0.041 NA   NA
 7624709 7624710 SSUSC84_1425 SSUSC84_1426     TRUE 0.926 11.000 0.025 NA   NA
 7624710 7624711 SSUSC84_1426 SSUSC84_1427   gcaD TRUE 0.872 9.000 0.015 1.000 N NA
 7624711 7624712 SSUSC84_1427 SSUSC84_1428 gcaD   FALSE 0.155 176.000 0.003 NA   NA
 7624712 7624713 SSUSC84_1428 SSUSC84_1429     TRUE 0.916 -3.000 0.000 NA   NA
 7624713 7624714 SSUSC84_1429 SSUSC84_1430     FALSE 0.150 116.000 0.000 NA   NA
 7624714 7624715 SSUSC84_1430 SSUSC84_1431     TRUE 0.996 -7.000 0.710 NA   NA
 7624715 7624716 SSUSC84_1431 SSUSC84_1432     FALSE 0.342 60.000 0.000 NA   NA
 7624716 7624717 SSUSC84_1432 SSUSC84_1433     TRUE 0.894 -13.000 0.000 NA   NA
 7624717 7624718 SSUSC84_1433 SSUSC84_1434     TRUE 0.916 -3.000 0.000 NA   NA
 7624718 7624719 SSUSC84_1434 SSUSC84_1435     FALSE 0.043 306.000 0.000 NA   NA
 7624719 7624720 SSUSC84_1435 SSUSC84_1436     FALSE 0.098 175.000 0.000 1.000   NA
 7624720 7624721 SSUSC84_1436 SSUSC84_1437     TRUE 0.996 2.000 0.855 1.000   NA
 7624721 7624722 SSUSC84_1437 SSUSC84_1438     TRUE 0.695 96.000 0.492 1.000 N NA
 7624722 7624723 SSUSC84_1438 SSUSC84_1439     TRUE 0.999 -7.000 0.812 1.000 Y NA
 7624725 7624726 SSUSC84_1441 SSUSC84_1442     FALSE 0.119 147.000 0.000 NA   NA
 7624726 7624727 SSUSC84_1442 SSUSC84_1443     TRUE 0.836 10.000 0.000 NA   NA
 7624727 7624728 SSUSC84_1443 SSUSC84_1444     TRUE 0.988 0.000 0.382 1.000 N NA
 7624728 7624729 SSUSC84_1444 SSUSC84_1445     TRUE 0.949 -7.000 0.046 1.000 N NA
 7624729 7624730 SSUSC84_1445 SSUSC84_1446     FALSE 0.042 311.000 0.000 NA   NA
 7624730 7624731 SSUSC84_1446 SSUSC84_1447     TRUE 0.981 -16.000 0.206 NA   NA
 7624731 7624732 SSUSC84_1447 SSUSC84_1448   lgt TRUE 0.948 11.000 0.079 NA   NA
 7624732 7624733 SSUSC84_1448 SSUSC84_1449 lgt ptsK TRUE 0.989 2.000 0.494 1.000 N NA
 7624734 7624735 SSUSC84_1450 SSUSC84_1451 pmi   FALSE 0.026 254.000 0.000 NA N NA
 7624735 7624736 SSUSC84_1451 SSUSC84_1452     TRUE 0.939 18.000 0.000 NA Y NA
 7624737 7624738 SSUSC84_1453 SSUSC84_1454     FALSE 0.267 70.000 0.000 NA   NA
 7624738 7624739 SSUSC84_1454 SSUSC84_1455     TRUE 0.894 -13.000 0.000 NA   NA
 7624739 7624740 SSUSC84_1455 SSUSC84_1456     FALSE 0.234 76.000 0.000 NA   NA
 7624740 7624741 SSUSC84_1456 SSUSC84_1457     FALSE 0.150 116.000 0.000 NA   NA
 7624743 7624744 SSUSC84_1459 SSUSC84_1460     TRUE 0.918 48.000 0.373 1.000   NA
 7624744 7624745 SSUSC84_1460 SSUSC84_1461     TRUE 0.978 -3.000 0.000 1.000 Y NA
 7624745 7624746 SSUSC84_1461 SSUSC84_1462   murZ FALSE 0.299 96.000 0.052 1.000 N NA
 7624746 7624747 SSUSC84_1462 SSUSC84_1463 murZ   FALSE 0.116 151.000 0.000 1.000   NA
 7624747 7624748 SSUSC84_1463 SSUSC84_1464   metK TRUE 0.549 44.000 0.000 1.000   NA
 7624748 7624749 SSUSC84_1464 SSUSC84_1465 metK   FALSE 0.013 399.000 0.000 1.000 N NA
 7624749 7624750 SSUSC84_1465 SSUSC84_1466     TRUE 0.781 19.000 0.000 NA   NA
 7624750 7624751 SSUSC84_1466 SSUSC84_1467     TRUE 0.358 59.000 0.000 NA   NA
 7624753 7624754 SSUSC84_1469 SSUSC84_1470   dnaH FALSE 0.227 195.000 0.067 NA   NA
 7624754 7624755 SSUSC84_1470 SSUSC84_1471 dnaH   TRUE 0.939 0.000 0.030 NA N NA
 7624755 7624756 SSUSC84_1471 SSUSC84_1472     TRUE 0.431 65.000 0.007 NA   NA
 7624756 7624757 SSUSC84_1472 SSUSC84_1473     FALSE 0.205 88.000 0.000 NA   NA
 7624757 7624758 SSUSC84_1473 SSUSC84_1474   udk TRUE 0.788 2.000 0.000 NA N NA
 7624759 7624760 SSUSC84_1475 SSUSC84_1476     TRUE 0.904 -10.000 0.000 NA   NA
 7624761 7624762 SSUSC84_1477 SSUSC84_1478 pgdA gloA FALSE 0.021 292.000 0.000 1.000 N NA
 7624762 7624763 SSUSC84_1478 SSUSC84_1479 gloA   FALSE 0.071 211.000 0.000 NA   NA
 7624763 7624764 SSUSC84_1479 SSUSC84_1480   gpmA FALSE 0.088 187.000 0.000 NA   NA
 7624765 7624766 SSUSC84_1481 SSUSC84_1482 atoB mvaS TRUE 0.894 29.000 0.000 1.000 Y NA
 7624766 7624767 SSUSC84_1482 SSUSC84_1483 mvaS mvaA TRUE 0.893 62.000 0.183 1.000 Y NA
 7624767 7624768 SSUSC84_1483 SSUSC84_1484 mvaA   FALSE 0.030 228.000 0.000 1.000 N NA
 7624771 7624772 SSUSC84_1487 SSUSC84_1488 hlpA   TRUE 0.591 90.000 0.156 NA   NA
 7624772 7624773 SSUSC84_1488 SSUSC84_1489     TRUE 0.995 -28.000 0.828 NA   NA
 7624773 7624774 SSUSC84_1489 SSUSC84_1490     TRUE 0.978 -31.000 0.203 NA   NA
 7624774 7624775 SSUSC84_1490 SSUSC84_1491   recN FALSE 0.298 94.000 0.006 NA   NA
 7624775 7624776 SSUSC84_1491 SSUSC84_1492 recN   TRUE 0.924 3.000 0.037 1.000 N NA
 7624776 7624777 SSUSC84_1492 SSUSC84_1493     TRUE 0.950 -7.000 0.048 1.000 N NA
 7624777 7624778 SSUSC84_1493 SSUSC84_1494   fps TRUE 0.953 -7.000 0.058 1.000 N NA
 7624778 7624779 SSUSC84_1494 SSUSC84_1495 fps xseB TRUE 0.964 0.000 0.100 1.000 N NA
 7624779 7624780 SSUSC84_1495 SSUSC84_1496 xseB xseA TRUE 0.996 -25.000 0.412 0.001 Y NA
 7624782 7624783 SSUSC84_1498 SSUSC84_1499     FALSE 0.030 388.000 0.000 1.000   NA
 7624783 7624784 SSUSC84_1499 SSUSC84_1500     TRUE 0.997 2.000 0.500 0.011 Y NA
 7624786 7624787 SSUSC84_1502 SSUSC84_1503     FALSE 0.022 569.000 0.000 NA   NA
 7624787 7624788 SSUSC84_1503 SSUSC84_1504   ppaC FALSE 0.022 561.000 0.000 1.000   NA
 7624790 7624791 SSUSC84_1506 SSUSC84_1507 pflC   FALSE 0.293 121.000 0.028 NA   NA
 7624794 7624795 SSUSC84_1510 SSUSC84_1511     FALSE 0.078 108.000 0.000 1.000 N NA
 7624795 7624796 SSUSC84_1511 SSUSC84_1512   nadE TRUE 0.990 13.000 0.194 0.003 Y NA
 7624797 7624798 SSUSC84_m0009 SSUSC84_1513     FALSE 0.020 660.000 0.000 NA   NA
 7624798 7624799 SSUSC84_1513 SSUSC84_1514     TRUE 0.957 -3.000 0.012 NA   NA
 7624799 7624800 SSUSC84_1514 SSUSC84_1515     TRUE 0.921 9.000 0.016 NA   NA
 7624800 7624801 SSUSC84_1515 SSUSC84_1516     FALSE 0.196 188.000 0.032 NA   NA
 7624801 7624802 SSUSC84_1516 SSUSC84_1517   coaD TRUE 0.889 -13.000 0.003 1.000 N NA
 7624802 7624803 SSUSC84_1517 SSUSC84_1518 coaD   TRUE 0.908 -10.000 0.008 1.000 N NA
 7624803 7624804 SSUSC84_1518 SSUSC84_1519     FALSE 0.043 308.000 0.000 NA   NA
 7624804 7624805 SSUSC84_1519 SSUSC84_1520     TRUE 0.377 57.000 0.000 NA   NA
 7624805 7624806 SSUSC84_1520 SSUSC84_1521     TRUE 0.964 0.000 0.035 NA   NA
 7624806 7624807 SSUSC84_1521 SSUSC84_1522     FALSE 0.043 308.000 0.000 NA   NA
 7624807 7624808 SSUSC84_1522 SSUSC84_1523     TRUE 0.999 -3.000 0.857 0.010 Y NA
 7624808 7624809 SSUSC84_1523 SSUSC84_1524     TRUE 0.959 39.000 0.500 NA   NA
 7624809 7624810 SSUSC84_1524 SSUSC84_1525     TRUE 0.982 -3.000 0.136 NA   NA
 7624810 7624811 SSUSC84_1525 SSUSC84_1526   dpr FALSE 0.015 361.000 0.000 1.000 N NA
 7624812 7624813 SSUSC84_1527 SSUSC84_1528     FALSE 0.101 170.000 0.000 NA   NA
 7624813 7624814 SSUSC84_1528 SSUSC84_1529     FALSE 0.255 132.000 0.019 NA   NA
 7624814 7624815 SSUSC84_1529 SSUSC84_1530     TRUE 0.990 -10.000 0.351 NA   NA
 7624816 7624817 SSUSC84_1531 SSUSC84_1532     TRUE 0.978 25.000 0.600 NA   NA
 7624817 7624818 SSUSC84_1532 SSUSC84_m0010     TRUE 0.358 59.000 0.000 NA   NA
 7624818 7624819 SSUSC84_m0010 SSUSC84_1533     TRUE 0.469 50.000 0.000 NA   NA
 7624819 7624820 SSUSC84_1533 SSUSC84_1534     TRUE 0.482 49.000 0.000 NA   NA
 7624820 7624821 SSUSC84_1534 SSUSC84_1535     FALSE 0.035 350.000 0.000 NA   NA
 7624821 7624822 SSUSC84_1535 SSUSC84_1536   rluB TRUE 0.956 0.000 0.014 NA   NA
 7624822 7624823 SSUSC84_1536 SSUSC84_1537 rluB scpB TRUE 0.980 -10.000 0.224 NA N NA
 7624823 7624824 SSUSC84_1537 SSUSC84_1538 scpB scpA TRUE 0.992 -16.000 0.570 NA   NA
 7624824 7624825 SSUSC84_1538 SSUSC84_1539 scpA xerD TRUE 0.958 0.000 0.017 NA   NA
 7624825 7624826 SSUSC84_1539 SSUSC84_1540 xerD   TRUE 0.979 -3.000 0.111 NA   NA
 7624826 7624827 SSUSC84_1540 SSUSC84_1541     TRUE 0.967 -3.000 0.034 NA   NA
 7624827 7624828 SSUSC84_1541 SSUSC84_1542     TRUE 0.919 -27.000 0.004 NA   NA
 7624828 7624829 SSUSC84_1542 SSUSC84_1543   glr TRUE 0.946 -3.000 0.034 1.000 N NA
 7624829 7624830 SSUSC84_1543 SSUSC84_1544 glr   FALSE 0.350 90.000 0.014 1.000   NA
 7624830 7624831 SSUSC84_1544 SSUSC84_1545     TRUE 0.390 100.000 0.051 1.000   NA
 7624833 7624834 SSUSC84_1547 SSUSC84_1548     TRUE 0.931 22.000 0.123 NA   NA
 7624834 7624835 SSUSC84_1548 SSUSC84_1549     TRUE 0.744 47.000 0.043 1.000   NA
 7624836 7624837 SSUSC84_1550 SSUSC84_1551     TRUE 0.578 70.000 0.154 1.000 N NA
 7624838 7624839 SSUSC84_1552 SSUSC84_1553 greA   TRUE 0.534 74.000 0.079 NA   NA
 7624839 7624840 SSUSC84_1553 SSUSC84_1554     TRUE 0.610 72.000 0.120 NA   NA
 7624840 7624841 SSUSC84_1554 SSUSC84_1555   murC TRUE 0.577 56.000 0.014 1.000   NA
 7624841 7624842 SSUSC84_1555 SSUSC84_1556 murC   TRUE 0.947 2.000 0.013 NA   NA
 7624842 7624843 SSUSC84_1556 SSUSC84_1557     TRUE 0.611 79.000 0.151 NA   NA
 7624843 7624844 SSUSC84_1557 SSUSC84_1558     FALSE 0.123 139.000 0.000 NA   NA
 7624844 7624845 SSUSC84_1558 SSUSC84_1559     TRUE 0.895 2.000 0.000 NA   NA
 7624845 7624846 SSUSC84_1559 SSUSC84_1560   engA FALSE 0.274 68.000 0.000 NA   NA
 7624846 7624847 SSUSC84_1560 SSUSC84_1561 engA   TRUE 0.781 19.000 0.000 NA   NA
 7624847 7624848 SSUSC84_1561 SSUSC84_1562   dnaI TRUE 0.795 18.000 0.000 NA   NA
 7624848 7624849 SSUSC84_1562 SSUSC84_1563 dnaI   TRUE 0.999 0.000 0.817 NA Y NA
 7624849 7624850 SSUSC84_1563 SSUSC84_1564     TRUE 0.960 -13.000 0.109 NA N NA
 7624850 7624851 SSUSC84_1564 SSUSC84_1565     FALSE 0.255 72.000 0.000 NA   NA
 7624851 7624852 SSUSC84_1565 SSUSC84_1566   csrR FALSE 0.200 90.000 0.000 NA   NA
 7624852 7624853 SSUSC84_1566 SSUSC84_1567 csrR gnd FALSE 0.238 82.000 0.012 1.000 N NA
 7624853 7624854 SSUSC84_1567 SSUSC84_1568 gnd   FALSE 0.272 97.000 0.002 NA   NA
 7624854 7624855 SSUSC84_1568 SSUSC84_1569     TRUE 0.836 10.000 0.000 NA   NA
 7624855 7624856 SSUSC84_1569 SSUSC84_1570     TRUE 0.953 14.000 0.117 NA   NA
 7624856 7624857 SSUSC84_1570 SSUSC84_1571     TRUE 0.795 18.000 0.000 NA   NA
 7624857 7624858 SSUSC84_1571 SSUSC84_1572     FALSE 0.220 79.000 0.000 NA   NA
 7624858 7624859 SSUSC84_1572 SSUSC84_1573   mraY FALSE 0.195 92.000 0.000 NA   NA
 7624859 7624860 SSUSC84_1573 SSUSC84_1574 mraY pbpX TRUE 0.986 2.000 0.038 1.000 Y NA
 7624860 7624861 SSUSC84_1574 SSUSC84_1575 pbpX ftsL TRUE 0.989 0.000 0.456 1.000 N NA
 7624861 7624862 SSUSC84_1575 SSUSC84_1576 ftsL mraW TRUE 0.920 11.000 0.077 1.000 N NA
 7624863 7624864 SSUSC84_1577 SSUSC84_1578     TRUE 0.838 11.000 0.000 NA   NA
 7624864 7624865 SSUSC84_1578 SSUSC84_1579     TRUE 0.816 15.000 0.000 NA   NA
 7624865 7624866 SSUSC84_1579 SSUSC84_1580     TRUE 0.838 11.000 0.000 NA   NA
 7624866 7624867 SSUSC84_1580 SSUSC84_1581     TRUE 0.824 13.000 0.000 NA   NA
 7624867 7624868 SSUSC84_1581 SSUSC84_1582     TRUE 0.904 -10.000 0.000 NA   NA
 7624868 7624869 SSUSC84_1582 SSUSC84_1583     TRUE 0.424 53.000 0.000 NA   NA
 7624870 7624871 SSUSC84_1584 SSUSC84_1585     TRUE 0.997 20.000 1.000 1.000 Y NA
 7624871 7624872 SSUSC84_1585 SSUSC84_1586     FALSE 0.225 78.000 0.000 1.000   NA
 7624872 7624873 SSUSC84_1586 SSUSC84_1587     FALSE 0.221 79.000 0.000 1.000   NA
 7624873 7624874 SSUSC84_1587 SSUSC84_1588     TRUE 0.610 19.000 0.000 1.000 N NA
 7624875 7624876 SSUSC84_1589 SSUSC84_1590     FALSE 0.128 133.000 0.000 NA   NA
 7624876 7624877 SSUSC84_1590 SSUSC84_1591     TRUE 0.816 15.000 0.000 NA   NA
 7624877 7624878 SSUSC84_1591 SSUSC84_1592     TRUE 0.995 12.000 0.490 0.003 Y NA
 7624878 7624879 SSUSC84_1592 SSUSC84_1593     FALSE 0.018 321.000 0.000 1.000 N NA
 7624880 7624881 SSUSC84_1594 SSUSC84_1595     FALSE 0.025 455.000 0.000 NA   NA
 7624881 7624882 SSUSC84_1595 SSUSC84_1596   glyS TRUE 0.922 10.000 0.020 NA   NA
 7624882 7624883 SSUSC84_1596 SSUSC84_1597 glyS glyQ TRUE 0.998 0.000 0.651 0.001 Y NA
 7624883 7624884 SSUSC84_1597 SSUSC84_1598 glyQ   FALSE 0.042 311.000 0.000 NA   NA
 7624884 7624885 SSUSC84_1598 SSUSC84_1599     FALSE 0.056 267.000 0.000 NA   NA
 7624885 7624886 SSUSC84_1599 SSUSC84_1600     FALSE 0.092 182.000 0.000 NA   NA
 7624886 7624887 SSUSC84_1600 SSUSC84_1601     TRUE 0.999 1.000 0.938 1.000 Y NA
 7624887 7624888 SSUSC84_1601 SSUSC84_1602     TRUE 0.966 -7.000 0.104 1.000 N NA
 7624888 7624889 SSUSC84_1602 SSUSC84_1603     FALSE 0.051 157.000 0.000 NA N NA
 7624889 7624890 SSUSC84_1603 SSUSC84_1604     FALSE 0.117 150.000 0.000 NA   NA
 7624891 7624892 SSUSC84_1605 SSUSC84_1606 metE metF TRUE 0.985 4.000 0.050 0.002 Y NA
 7624894 7624895 SSUSC84_1608 SSUSC84_1609   manL FALSE 0.067 222.000 0.000 1.000   NA
 7624895 7624896 SSUSC84_1609 SSUSC84_1610 manL manM TRUE 0.995 32.000 0.943 0.015 Y NA
 7624896 7624897 SSUSC84_1610 SSUSC84_1611 manM manN TRUE 0.997 18.000 0.812 0.015 Y NA
 7624897 7624898 SSUSC84_1611 SSUSC84_1612 manN   TRUE 0.903 60.000 0.583 NA   NA
 7624898 7624899 SSUSC84_1612 SSUSC84_m0011     TRUE 0.746 22.000 0.000 NA   NA
 7624899 7624900 SSUSC84_m0011 SSUSC84_1613   serS TRUE 0.838 11.000 0.000 NA   NA
 7624901 7624902 SSUSC84_1614 SSUSC84_1615     TRUE 0.890 45.000 0.011 0.052 Y NA
 7624902 7624903 SSUSC84_1615 SSUSC84_1616     TRUE 0.471 108.000 0.000 0.003 Y NA
 7624903 7624904 SSUSC84_1616 SSUSC84_1617     TRUE 0.977 -7.000 0.104 NA   NA
 7624906 7624907 SSUSC84_1619 SSUSC84_1620     FALSE 0.096 178.000 0.000 NA   NA
 7624907 7624908 SSUSC84_1620 SSUSC84_1621     TRUE 0.912 -7.000 0.000 NA   NA
 7624908 7624909 SSUSC84_1621 SSUSC84_1622   accA FALSE 0.307 64.000 0.000 1.000   NA
 7624909 7624910 SSUSC84_1622 SSUSC84_1623 accA accD TRUE 0.996 -3.000 0.234 0.002 Y NA
 7624910 7624911 SSUSC84_1623 SSUSC84_1624 accD accC TRUE 0.980 15.000 0.090 1.000 Y NA
 7624911 7624912 SSUSC84_1624 SSUSC84_1625 accC fabZ FALSE 0.293 294.000 0.045 1.000 Y NA
 7624912 7624913 SSUSC84_1625 SSUSC84_1626 fabZ fabE TRUE 0.991 -3.000 0.047 0.006 Y NA
 7624913 7624914 SSUSC84_1626 SSUSC84_1627 fabE fabF TRUE 0.990 1.000 0.074 1.000 Y NA
 7624914 7624915 SSUSC84_1627 SSUSC84_1628 fabF fabG TRUE 0.955 26.000 0.056 1.000 Y NA
 7624915 7624916 SSUSC84_1628 SSUSC84_1629 fabG fabD TRUE 0.995 10.000 0.432 0.006 Y NA
 7624916 7624917 SSUSC84_1629 SSUSC84_1630 fabD fabK TRUE 0.972 2.000 0.099 1.000   NA
 7624917 7624918 SSUSC84_1630 SSUSC84_1631 fabK acpP TRUE 0.446 173.000 0.216 1.000   NA
 7624918 7624919 SSUSC84_1631 SSUSC84_1632 acpP fabH TRUE 0.665 60.000 0.065 0.006   NA
 7624919 7624920 SSUSC84_1632 SSUSC84_1633 fabH   TRUE 0.959 -3.000 0.070 1.000 N NA
 7624920 7624921 SSUSC84_1633 SSUSC84_1634     TRUE 0.419 80.000 0.098 1.000 N NA
 7624921 7624922 SSUSC84_1634 SSUSC84_1635     FALSE 0.030 436.000 0.000 0.044   NA
 7624924 7624925 SSUSC84_1637 SSUSC84_1638   alr FALSE 0.076 201.000 0.000 NA   NA
 7624925 7624926 SSUSC84_1638 SSUSC84_1639 alr acpS TRUE 0.962 -7.000 0.093 1.000 N NA
 7624926 7624927 SSUSC84_1639 SSUSC84_1640 acpS secA FALSE 0.158 115.000 0.008 1.000 N NA
 7624927 7624928 SSUSC84_1640 SSUSC84_1641 secA   FALSE 0.040 320.000 0.000 NA   NA
 7624928 7624929 SSUSC84_1641 SSUSC84_1642   scrK FALSE 0.021 609.000 0.000 NA   NA
 7624929 7624930 SSUSC84_1642 SSUSC84_1643 scrK scrA TRUE 0.767 128.000 0.235 1.000 Y NA
 7624931 7624932 SSUSC84_1644 SSUSC84_1645 scrB scrR TRUE 0.989 -19.000 0.571 1.000 N NA
 7624933 7624934 SSUSC84_1646 SSUSC84_1647 nusB   TRUE 0.988 -10.000 0.265 NA   NA
 7624934 7624935 SSUSC84_1647 SSUSC84_1648   efp TRUE 0.847 28.000 0.031 NA   NA
 7624935 7624936 SSUSC84_1648 SSUSC84_1649 efp   TRUE 0.634 64.000 0.160 1.000 N NA
 7624936 7624937 SSUSC84_1649 SSUSC84_1650   uvrA FALSE 0.186 99.000 0.008 1.000 N NA
 7624938 7624939 SSUSC84_1651 SSUSC84_1652     TRUE 0.937 16.000 0.072 NA   NA
 7624940 7624941 SSUSC84_1653 SSUSC84_1654 rpsR ssb TRUE 0.689 33.000 0.012 1.000 N NA
 7624941 7624942 SSUSC84_1654 SSUSC84_1655 ssb rpsF TRUE 0.852 12.000 0.012 1.000 N NA
 7624946 7624947 SSUSC84_1659 SSUSC84_1660 acoL pdhC FALSE 0.184 274.000 0.000 1.000 Y NA
 7624947 7624948 SSUSC84_1660 SSUSC84_1661 pdhC pdhB FALSE 0.143 341.000 0.000 0.043 Y NA
 7624948 7624949 SSUSC84_1661 SSUSC84_1662 pdhB pdhA TRUE 0.782 287.000 0.769 0.001 Y NA
 7624951 7624952 SSUSC84_1664 SSUSC84_1665     FALSE 0.104 165.000 0.000 NA   NA
 7624952 7624953 SSUSC84_1665 SSUSC84_1666   rbfA FALSE 0.049 282.000 0.000 NA   NA
 7624953 7624954 SSUSC84_1666 SSUSC84_1667 rbfA infB TRUE 0.837 156.000 0.530 1.000 Y NA
 7624954 7624955 SSUSC84_1667 SSUSC84_1668 infB   TRUE 0.987 18.000 0.223 NA Y NA
 7624955 7624956 SSUSC84_1668 SSUSC84_1669     TRUE 0.986 -13.000 0.408 NA N NA
 7624956 7624957 SSUSC84_1669 SSUSC84_1670   nusA TRUE 0.991 17.000 0.323 NA Y NA
 7624957 7624958 SSUSC84_1670 SSUSC84_1671 nusA   TRUE 0.887 74.000 0.759 NA   NA
 7624958 7624959 SSUSC84_1671 SSUSC84_1672     FALSE 0.037 571.000 0.004 NA   NA
 7624959 7624960 SSUSC84_1672 SSUSC84_1673     TRUE 0.984 -3.000 0.154 NA   NA
 7624960 7624961 SSUSC84_1673 SSUSC84_1674     TRUE 0.708 50.000 0.107 NA N NA
 7624961 7624962 SSUSC84_1674 SSUSC84_1675     TRUE 0.978 -3.000 0.167 NA N NA
 7624963 7624964 SSUSC84_1676 SSUSC84_1677     TRUE 0.895 2.000 0.000 NA   NA
 7624965 7624966 SSUSC84_1678 SSUSC84_1679     TRUE 0.986 -3.000 0.283 NA N NA
 7624966 7624967 SSUSC84_1679 SSUSC84_1680     TRUE 0.965 -7.000 0.033 1.000   NA
 7624967 7624968 SSUSC84_1680 SSUSC84_1681     FALSE 0.175 101.000 0.000 1.000   NA
 7624968 7624969 SSUSC84_1681 SSUSC84_1682     TRUE 0.992 3.000 0.567 NA   NA
 7624971 7624972 SSUSC84_1684 SSUSC84_1685 oppC oppB TRUE 0.997 14.000 0.727 0.026 Y NA
 7624972 7624973 SSUSC84_1685 SSUSC84_1686 oppB oppF TRUE 0.995 2.000 0.727 1.000   NA
 7624973 7624974 SSUSC84_1686 SSUSC84_1687 oppF oppD TRUE 0.992 3.000 0.477 0.001   NA
 7624974 7624975 SSUSC84_1687 SSUSC84_1688 oppD oppA FALSE 0.112 377.000 0.000 1.000 Y NA
 7624977 7624978 SSUSC84_1690 SSUSC84_1691 sufB   FALSE 0.225 78.000 0.000 NA   NA
 7624978 7624979 SSUSC84_1691 SSUSC84_1692   iscU FALSE 0.120 144.000 0.000 NA   NA
 7624979 7624980 SSUSC84_1692 SSUSC84_1693 iscU csdB TRUE 0.982 -13.000 0.292 1.000 N NA
 7624980 7624981 SSUSC84_1693 SSUSC84_1694 csdB sufD TRUE 0.988 4.000 0.606 1.000 N NA
 7624981 7624982 SSUSC84_1694 SSUSC84_1695 sufD sufC TRUE 0.983 17.000 0.139 1.000 Y NA
 7624982 7624983 SSUSC84_1695 SSUSC84_1696 sufC rgpG FALSE 0.028 553.000 0.013 1.000 N NA
 7624983 7624984 SSUSC84_1696 SSUSC84_1697 rgpG mecA TRUE 0.985 -3.000 0.267 NA N NA
 7624984 7624985 SSUSC84_1697 SSUSC84_1698 mecA bacA FALSE 0.334 128.000 0.132 NA N NA
 7624986 7624987 SSUSC84_1699 SSUSC84_1700   glnQ2 TRUE 0.998 -7.000 0.758 1.000 Y NA
 7624988 7624989 SSUSC84_1701 SSUSC84_1702     TRUE 0.413 86.000 0.036 NA   NA
 7624989 7624990 SSUSC84_1702 SSUSC84_1703   ilvA TRUE 0.872 10.000 0.017 1.000 N NA
 7624990 7624991 SSUSC84_1703 SSUSC84_1704 ilvA ilvC FALSE 0.290 283.000 0.033 1.000 Y NA
 7624991 7624992 SSUSC84_1704 SSUSC84_1705 ilvC ilvH TRUE 0.682 141.000 0.130 0.002 Y NA
 7624992 7624993 SSUSC84_1705 SSUSC84_1706 ilvH alsS TRUE 0.996 -7.000 0.249 0.001 Y NA
 7624994 7624995 SSUSC84_1707 SSUSC84_1708     TRUE 0.972 -13.000 0.100 NA   NA
 7624995 7624996 SSUSC84_1708 SSUSC84_1709     TRUE 0.985 -25.000 0.300 NA   NA
 7624996 7624997 SSUSC84_1709 SSUSC84_1710   ilvD FALSE 0.107 161.000 0.000 NA   NA
 7624997 7624998 SSUSC84_1710 SSUSC84_1711 ilvD   TRUE 0.453 51.000 0.000 NA   NA
 7624999 7625000 SSUSC84_1712 SSUSC84_1713     FALSE 0.197 91.000 0.000 NA   NA
 7625000 7625001 SSUSC84_1713 SSUSC84_1714   rpsI FALSE 0.041 313.000 0.000 NA   NA
 7625001 7625002 SSUSC84_1714 SSUSC84_1715 rpsI rplM TRUE 0.994 20.000 0.601 0.021 Y NA
 7625002 7625003 SSUSC84_1715 SSUSC84_1716 rplM   TRUE 0.840 9.000 0.000 NA   NA
 7625003 7625004 SSUSC84_1716 SSUSC84_1717     FALSE 0.033 364.000 0.000 NA   NA
 7625004 7625005 SSUSC84_1717 SSUSC84_1718     TRUE 0.967 -3.000 0.036 NA   NA
 7625005 7625006 SSUSC84_1718 SSUSC84_1719     TRUE 0.976 1.000 0.109 NA   NA
 7625006 7625007 SSUSC84_1719 SSUSC84_1720     TRUE 0.390 56.000 0.000 1.000   NA
 7625008 7625009 SSUSC84_1721 SSUSC84_1722     FALSE 0.239 75.000 0.000 NA   NA
 7625010 7625011 SSUSC84_1723 SSUSC84_1724   msmK FALSE 0.061 240.000 0.000 NA   NA
 7625011 7625012 SSUSC84_1724 SSUSC84_1725 msmK lrp FALSE 0.062 236.000 0.000 NA   NA
 7625012 7625013 SSUSC84_1725 SSUSC84_1726 lrp   TRUE 0.824 13.000 0.000 NA   NA
 7625013 7625014 SSUSC84_1726 SSUSC84_1727     TRUE 0.996 -7.000 0.227 0.010 Y NA
 7625014 7625015 SSUSC84_1727 SSUSC84_1728     TRUE 0.996 -3.000 0.667 NA   NA
 7625015 7625016 SSUSC84_1728 SSUSC84_1729     FALSE 0.067 224.000 0.000 NA   NA
 7625016 7625017 SSUSC84_1729 SSUSC84_1730     FALSE 0.010 590.000 0.000 1.000 N NA
 7625017 7625018 SSUSC84_1730 SSUSC84_1731     TRUE 0.899 70.000 0.250 0.026 Y NA
 7625018 7625019 SSUSC84_1731 SSUSC84_1732     TRUE 0.998 10.000 0.917 0.026 Y NA
 7625019 7625020 SSUSC84_1732 SSUSC84_1733   gcnA FALSE 0.337 202.000 0.182 1.000   NA
 7625020 7625021 SSUSC84_1733 SSUSC84_1734 gcnA   TRUE 0.987 10.000 0.500 NA   NA
 7625021 7625022 SSUSC84_1734 SSUSC84_1735     TRUE 0.966 -19.000 0.000 NA Y NA
 7625022 7625023 SSUSC84_1735 SSUSC84_1736     TRUE 0.895 2.000 0.000 1.000   NA
 7625025 7625026 SSUSC84_1738 SSUSC84_1739     FALSE 0.060 246.000 0.000 1.000   NA
 7625026 7625027 SSUSC84_1739 SSUSC84_1740   cysS TRUE 0.980 -7.000 0.129 1.000   NA
 7625027 7625028 SSUSC84_1740 SSUSC84_1741 cysS   TRUE 0.838 11.000 0.000 NA   NA
 7625028 7625029 SSUSC84_1741 SSUSC84_1742     TRUE 0.915 -6.000 0.000 NA   NA
 7625029 7625030 SSUSC84_1742 SSUSC84_1743   cysE TRUE 0.661 15.000 0.000 1.000 N NA
 7625030 7625031 SSUSC84_1743 SSUSC84_1744 cysE pnpA TRUE 0.390 56.000 0.006 1.000 N NA
 7625033 7625034 SSUSC84_1746 SSUSC84_1747     TRUE 0.904 -10.000 0.000 NA   NA
 7625034 7625035 SSUSC84_1747 SSUSC84_1748   murQ TRUE 0.895 2.000 0.000 1.000   NA
 7625037 7625038 SSUSC84_1750 SSUSC84_1751 rpsO pyrP FALSE 0.034 204.000 0.000 1.000 N NA
 7625038 7625039 SSUSC84_1751 SSUSC84_1752 pyrP   FALSE 0.151 115.000 0.000 NA   NA
 7625039 7625040 SSUSC84_1752 SSUSC84_1753     FALSE 0.113 154.000 0.000 NA   NA
 7625040 7625041 SSUSC84_1753 SSUSC84_1754     FALSE 0.029 402.000 0.000 NA   NA
 7625041 7625042 SSUSC84_1754 SSUSC84_1755     TRUE 0.908 -9.000 0.000 1.000   NA
 7625042 7625043 SSUSC84_1755 SSUSC84_1756     TRUE 0.867 4.000 0.000 NA   NA
 7625043 7625044 SSUSC84_1756 SSUSC84_1757     FALSE 0.045 297.000 0.000 NA   NA
 7625046 7625047 SSUSC84_1759 SSUSC84_1760   leuD TRUE 0.399 60.000 0.015 NA N NA
 7625047 7625048 SSUSC84_1760 SSUSC84_1761 leuD leuC TRUE 0.998 0.000 0.477 0.001 Y NA
 7625048 7625049 SSUSC84_1761 SSUSC84_1762 leuC leuB TRUE 0.972 3.000 0.000 0.002 Y NA
 7625049 7625050 SSUSC84_1762 SSUSC84_1763 leuB leuA TRUE 0.961 9.000 0.000 0.002 Y NA
 7625050 7625051 SSUSC84_1763 SSUSC84_1764 leuA   FALSE 0.030 380.000 0.000 1.000   NA
 7625051 7625052 SSUSC84_1764 SSUSC84_1765   pepS TRUE 0.787 59.000 0.190 1.000   NA
 7625052 7625053 SSUSC84_1765 SSUSC84_1766 pepS   FALSE 0.054 273.000 0.000 1.000   NA
 7625053 7625054 SSUSC84_1766 SSUSC84_1767     FALSE 0.062 236.000 0.000 NA   NA
 7625054 7625055 SSUSC84_1767 SSUSC84_1768   polC FALSE 0.206 87.000 0.000 NA   NA
 7625055 7625056 SSUSC84_1768 SSUSC84_1769 polC   FALSE 0.066 125.000 0.000 1.000 N NA
 7625056 7625057 SSUSC84_1769 SSUSC84_1770     TRUE 0.990 11.000 0.625 1.000   NA
 7625058 7625059 SSUSC84_1771 SSUSC84_1772     TRUE 0.994 11.000 0.316 0.002 Y NA
 7625059 7625060 SSUSC84_1772 SSUSC84_1773     TRUE 0.978 -3.000 0.099 1.000   NA
 7625060 7625061 SSUSC84_1773 SSUSC84_1774   glpF2 TRUE 0.994 10.000 0.857 0.046   NA
 7625062 7625063 SSUSC84_1775 SSUSC84_1776 proS eep FALSE 0.022 281.000 0.000 1.000 N NA
 7625063 7625064 SSUSC84_1776 SSUSC84_1777 eep   TRUE 0.883 10.000 0.027 1.000 N NA
 7625064 7625065 SSUSC84_1777 SSUSC84_1778   uppS TRUE 0.985 10.000 0.113 1.000 Y NA
 7625065 7625066 SSUSC84_1778 SSUSC84_1779 uppS   FALSE 0.158 114.000 0.007 NA N NA
 7625066 7625067 SSUSC84_1779 SSUSC84_1780   purA FALSE 0.076 110.000 0.000 NA N NA
 7625068 7625069 SSUSC84_1781 SSUSC84_1782 gshA ssnA FALSE 0.019 886.000 0.000 NA   NA
 7625069 7625070 SSUSC84_1782 SSUSC84_1783 ssnA   FALSE 0.218 80.000 0.000 NA   NA
 7625070 7625071 SSUSC84_1783 SSUSC84_1784     TRUE 0.944 -7.000 0.034 1.000 N NA
 7625072 7625073 SSUSC84_1785 SSUSC84_1786     TRUE 0.821 -7.000 0.000 1.000 N NA
 7625073 7625074 SSUSC84_1786 SSUSC84_1787     TRUE 0.953 10.000 0.000 1.000 Y NA
 7625074 7625075 SSUSC84_1787 SSUSC84_1788   clpC FALSE 0.203 114.000 0.022 1.000 N NA
 7625075 7625076 SSUSC84_1788 SSUSC84_1789 clpC ctsR TRUE 0.963 6.000 0.188 NA N NA
 7625077 7625078 SSUSC84_1790 SSUSC84_1791     TRUE 0.910 0.000 0.000 NA   NA
 7625079 7625080 SSUSC84_1792 SSUSC84_1793 tsf rpsB TRUE 0.885 156.000 0.748 1.000 Y NA
 7625080 7625081 SSUSC84_1793 SSUSC84_1794 rpsB   FALSE 0.036 347.000 0.000 1.000   NA
 7625083 7625084 SSUSC84_1795 SSUSC84_1796   nusG FALSE 0.121 144.000 0.000 1.000   NA
 7625084 7625085 SSUSC84_1796 SSUSC84_1797 nusG   TRUE 0.792 110.000 0.843 1.000 N NA
 7625085 7625086 SSUSC84_1797 SSUSC84_1798     TRUE 0.922 10.000 0.080 1.000 N NA
 7625086 7625087 SSUSC84_1798 SSUSC84_1799   pbp2A TRUE 0.894 22.000 0.111 1.000 N NA
 7625088 7625089 SSUSC84_1800 SSUSC84_1801     TRUE 0.789 2.000 0.000 1.000 N NA
 7625090 7625091 SSUSC84_1802 SSUSC84_1803 purR   FALSE 0.173 102.000 0.000 NA   NA
 7625091 7625092 SSUSC84_1803 SSUSC84_1804     TRUE 0.910 0.000 0.000 NA   NA
 7625092 7625093 SSUSC84_1804 SSUSC84_1805     TRUE 0.960 -10.000 0.030 NA   NA
 7625093 7625094 SSUSC84_1805 SSUSC84_1806   thiN TRUE 0.959 1.000 0.030 NA   NA
 7625094 7625095 SSUSC84_1806 SSUSC84_1807 thiN rpe TRUE 0.977 -7.000 0.166 1.000 N NA
 7625095 7625096 SSUSC84_1807 SSUSC84_1808 rpe engC TRUE 0.970 15.000 0.213 1.000   NA
 7625098 7625099 SSUSC84_1809 SSUSC84_1810     TRUE 0.916 -3.000 0.000 1.000   NA
 7625099 7625100 SSUSC84_1810 SSUSC84_1811     FALSE 0.033 363.000 0.000 1.000   NA
 7625100 7625101 SSUSC84_1811 SSUSC84_1812     FALSE 0.146 119.000 0.000 NA   NA
 7625101 7625102 SSUSC84_1812 SSUSC84_1813     FALSE 0.094 180.000 0.000 NA   NA
 7625102 7625103 SSUSC84_1813 SSUSC84_1814     TRUE 0.824 13.000 0.000 NA   NA
 7625103 7625104 SSUSC84_1814 SSUSC84_1815   ksgA FALSE 0.032 365.000 0.000 NA   NA
 7625104 7625105 SSUSC84_1815 SSUSC84_1816 ksgA   TRUE 0.845 20.000 0.002 NA   NA
 7625105 7625106 SSUSC84_1816 SSUSC84_1817     TRUE 0.820 14.000 0.000 NA   NA
 7625106 7625107 SSUSC84_1817 SSUSC84_1818     TRUE 0.994 2.000 0.615 NA   NA
 7625107 7625108 SSUSC84_1818 SSUSC84_1819   mutX FALSE 0.118 76.000 0.000 NA N NA
 7625108 7625109 SSUSC84_1819 SSUSC84_1820 mutX   TRUE 0.849 7.000