MicrobesOnline Operon Predictions for Streptococcus pneumoniae ATCC 700669

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 5829887 5829888 SPN23F_00010 SPN23F_00020 dnaA dnaN TRUE 0.624 159.000 0.328 1.000 Y NA
 5829888 5829889 SPN23F_00020 SPN23F_00030 dnaN   TRUE 0.554 65.000 0.009 NA   NA
 5829889 5829890 SPN23F_00030 SPN23F_00040     TRUE 0.491 84.000 0.064 NA   NA
 5829890 5829891 SPN23F_00040 SPN23F_00050   pth TRUE 0.875 72.000 0.184 1.000 Y NA
 5829891 5829892 SPN23F_00050 SPN23F_00060 pth trcF TRUE 0.981 1.000 0.137 1.000 N NA
 5829892 5829893 SPN23F_00060 SPN23F_00070 trcF   TRUE 0.665 58.000 0.024 1.000 N NA
 5829893 5829894 SPN23F_00070 SPN23F_00080     TRUE 0.974 -7.000 0.053 1.000 N NA
 5829894 5829895 SPN23F_00080 SPN23F_00090     TRUE 0.941 5.000 0.009 NA   NA
 5829895 5829896 SPN23F_00090 SPN23F_00100     TRUE 0.982 -7.000 0.105 NA   NA
 5829896 5829897 SPN23F_00100 SPN23F_00110     TRUE 0.959 -3.000 0.014 NA N NA
 5829897 5829898 SPN23F_00110 SPN23F_00120   hpt TRUE 0.975 4.000 0.067 0.066 N NA
 5829898 5829899 SPN23F_00120 SPN23F_00130 hpt ftsH TRUE 0.963 16.000 0.192 1.000 N NA
 5829901 5829902 SPN23F_00150 SPN23F_t01 comX tRNA-Glu TRUE 0.183 95.000 0.000 NA   NA
 5829902 5829903 SPN23F_t01 SPN23F_r01 tRNA-Glu   FALSE 0.064 298.000 0.000 NA   NA
 5829903 5829904 SPN23F_r01 SPN23F_t02   tRNA-Ala FALSE 0.091 139.000 0.000 NA   NA
 5829904 5829905 SPN23F_t02 SPN23F_r02 tRNA-Ala   FALSE 0.105 125.000 0.000 NA   NA
 5829905 5829906 SPN23F_r02 SPN23F_r03     TRUE 0.361 70.000 0.000 NA   NA
 5829906 5829907 SPN23F_r03 SPN23F_t03   tRNA-Asn TRUE 0.924 -19.000 0.000 NA   NA
 5829907 5829908 SPN23F_t03 SPN23F_00170 tRNA-Asn   TRUE 0.204 90.000 0.000 NA   NA
 5829910 5829911 SPN23F_00220 SPN23F_00230   purA FALSE 0.066 231.000 0.000 NA   NA
 5829911 5829912 SPN23F_00230 SPN23F_00240 purA   TRUE 0.218 201.000 0.000 1.000 Y NA
 5829912 5829913 SPN23F_00240 SPN23F_s01     TRUE 0.670 41.000 0.000 NA   NA
 5829914 5829915 SPN23F_00250 SPN23F_00270     TRUE 0.539 55.000 0.000 NA   NA
 5829915 5829916 SPN23F_00270 SPN23F_00280     TRUE 0.843 17.000 0.000 NA   NA
 5829916 5829917 SPN23F_00280 SPN23F_00290     TRUE 0.875 13.000 0.000 NA   NA
 5829917 5829918 SPN23F_00290 SPN23F_00300     TRUE 0.935 0.000 0.000 NA   NA
 5829918 5829919 SPN23F_00300 SPN23F_00310     TRUE 0.935 0.000 0.000 NA   NA
 5829920 5829921 SPN23F_00320 SPN23F_00330     FALSE 0.087 143.000 0.000 NA   NA
 5829921 5829922 SPN23F_00330 SPN23F_00340     TRUE 0.780 23.000 0.000 NA   NA
 5829924 5829925 SPN23F_00360 SPN23F_00370     TRUE 0.792 22.000 0.000 NA   NA
 5829927 5829928 SPN23F_00390 SPN23F_00400     TRUE 0.939 2.000 0.005 NA N NA
 5829928 5829929 SPN23F_00400 SPN23F_00410   sms FALSE 0.152 113.000 0.003 NA N NA
 5829929 5829930 SPN23F_00410 SPN23F_00420 sms   TRUE 0.419 73.000 0.009 1.000 N NA
 5829930 5829931 SPN23F_00420 SPN23F_00430     TRUE 0.763 25.000 0.000 NA   NA
 5829931 5829932 SPN23F_00430 SPN23F_00450   prsA1 FALSE 0.086 145.000 0.000 NA   NA
 5829932 5829933 SPN23F_00450 SPN23F_00460 prsA1   FALSE 0.118 118.000 0.000 NA   NA
 5829933 5829934 SPN23F_00460 SPN23F_00470     TRUE 0.926 2.000 0.000 NA   NA
 5829934 5829935 SPN23F_00470 SPN23F_00490   polA FALSE 0.068 612.000 0.000 NA   NA
 5829935 5829936 SPN23F_00490 SPN23F_00500 polA   TRUE 0.307 85.000 0.005 NA   NA
 5829936 5829937 SPN23F_00500 SPN23F_00510     TRUE 0.670 41.000 0.000 NA   NA
 5829939 5829940 SPN23F_00530 SPN23F_00540   recO TRUE 0.960 -3.000 0.012 1.000 N NA
 5829940 5829941 SPN23F_00540 SPN23F_00550 recO plsX TRUE 0.959 -3.000 0.011 1.000 N NA
 5829941 5829942 SPN23F_00550 SPN23F_00560 plsX   TRUE 0.989 6.000 0.017 0.009 Y NA
 5829942 5829943 SPN23F_00560 SPN23F_00561     TRUE 0.693 37.000 0.000 NA   NA
 5829943 5829944 SPN23F_00561 SPN23F_00570   blpO FALSE 0.069 205.000 0.000 NA   NA
 5829944 5829945 SPN23F_00570 SPN23F_00580 blpO   TRUE 0.917 3.000 0.000 NA   NA
 5829945 5829946 SPN23F_00580 SPN23F_00590     FALSE 0.068 587.000 0.000 NA   NA
 5829946 5829947 SPN23F_00590 SPN23F_00600     TRUE 0.988 13.000 0.444 0.075   NA
 5829947 5829948 SPN23F_00600 SPN23F_00610   purC FALSE 0.113 170.000 0.004 1.000   NA
 5829948 5829949 SPN23F_00610 SPN23F_00620 purC   TRUE 0.894 57.000 0.043 1.000 Y NA
 5829949 5829950 SPN23F_00620 SPN23F_00630   purF TRUE 0.611 93.000 0.024 1.000 Y NA
 5829950 5829951 SPN23F_00630 SPN23F_00640 purF purM TRUE 0.974 37.000 0.248 1.000 Y NA
 5829951 5829952 SPN23F_00640 SPN23F_00650 purM purN TRUE 0.997 -3.000 0.238 0.003 Y NA
 5829952 5829953 SPN23F_00650 SPN23F_00660 purN vanZ TRUE 0.268 84.000 0.003 NA N NA
 5829953 5829954 SPN23F_00660 SPN23F_00670 vanZ purH TRUE 0.780 25.000 0.002 NA N NA
 5829954 5829955 SPN23F_00670 SPN23F_00680 purH purD TRUE 0.672 122.000 0.238 1.000 Y NA
 5829955 5829956 SPN23F_00680 SPN23F_00690 purD purE TRUE 0.351 370.000 0.044 1.000 Y NA
 5829956 5829957 SPN23F_00690 SPN23F_00700 purE purK TRUE 0.992 -13.000 0.008 0.001 Y NA
 5829957 5829958 SPN23F_00700 SPN23F_00710 purK   TRUE 0.793 23.000 0.000 1.000   NA
 5829958 5829959 SPN23F_00710 SPN23F_00720   purB FALSE 0.081 173.000 0.000 1.000   NA
 5829960 5829961 SPN23F_00730 SPN23F_00740 strH   FALSE 0.056 315.000 0.000 1.000 N NA
 5829962 5829963 SPN23F_00750 SPN23F_00760     TRUE 0.995 -3.000 0.190 1.000 Y NA
 5829963 5829964 SPN23F_00760 SPN23F_00770     TRUE 0.993 28.000 0.810 0.036 Y NA
 5829964 5829965 SPN23F_00770 SPN23F_00780     TRUE 0.986 -13.000 0.000 0.036 Y NA
 5829965 5829966 SPN23F_00780 SPN23F_00790     TRUE 0.725 73.000 0.000 0.028 Y NA
 5829966 5829967 SPN23F_00790 SPN23F_00800   agaS FALSE 0.116 253.000 0.022 1.000 N NA
 5829967 5829968 SPN23F_00800 SPN23F_00810 agaS   FALSE 0.174 116.000 0.000 0.029 N NA
 5829968 5829969 SPN23F_00810 SPN23F_00820     FALSE 0.069 208.000 0.000 NA   NA
 5829969 5829970 SPN23F_00820 SPN23F_00830     FALSE 0.072 185.000 0.000 NA   NA
 5829971 5829972 SPN23F_00840 SPN23F_00850     TRUE 0.552 54.000 0.000 NA   NA
 5829972 5829973 SPN23F_00850 SPN23F_00860     TRUE 0.933 -10.000 0.000 NA   NA
 5829974 5829975 SPN23F_00870 SPN23F_00880     FALSE 0.064 256.000 0.000 NA   NA
 5829975 5829976 SPN23F_00880 SPN23F_00890     FALSE 0.076 169.000 0.000 NA   NA
 5829976 5829977 SPN23F_00890 SPN23F_00900     TRUE 0.996 14.000 0.490 0.005 Y NA
 5829977 5829978 SPN23F_00900 SPN23F_00910     FALSE 0.094 135.000 0.000 NA   NA
 5829978 5829979 SPN23F_00910 SPN23F_00920     TRUE 0.448 62.000 0.000 NA   NA
 5829979 5829980 SPN23F_00920 SPN23F_00940     TRUE 0.649 43.000 0.000 NA   NA
 5829980 5829981 SPN23F_00940 SPN23F_00950     FALSE 0.077 167.000 0.000 NA   NA
 5829981 5829982 SPN23F_00950 SPN23F_00960     TRUE 0.997 -3.000 0.500 1.000 Y NA
 5829982 5829983 SPN23F_00960 SPN23F_00970   rpsD FALSE 0.081 195.000 0.002 1.000 N NA
 5829983 5829984 SPN23F_00970 SPN23F_00980 rpsD   FALSE 0.072 185.000 0.000 NA   NA
 5829986 5829987 SPN23F_01000 SPN23F_01020     FALSE 0.064 319.000 0.000 NA   NA
 5829987 5829988 SPN23F_01020 SPN23F_01030     TRUE 0.997 14.000 0.917 0.053 Y NA
 5829988 5829989 SPN23F_01030 SPN23F_01040     TRUE 0.622 210.000 0.250 0.053 Y NA
 5829989 5829990 SPN23F_01040 SPN23F_01050     FALSE 0.064 272.000 0.000 NA   NA
 5829990 5829991 SPN23F_01050 SPN23F_01060     FALSE 0.064 274.000 0.000 NA   NA
 5829992 5829993 SPN23F_01070 SPN23F_01080     TRUE 0.886 62.000 0.500 NA   NA
 5829993 5829994 SPN23F_01080 SPN23F_01090     TRUE 0.985 -7.000 0.150 NA   NA
 5829994 5829995 SPN23F_01090 SPN23F_01100     TRUE 0.988 -13.000 0.250 NA   NA
 5829995 5829996 SPN23F_01100 SPN23F_01110     FALSE 0.091 139.000 0.000 NA   NA
 5829997 5829998 SPN23F_01130 SPN23F_01140     TRUE 0.873 42.000 0.000 NA Y NA
 5829999 5830000 SPN23F_01150 SPN23F_01160     FALSE 0.082 152.000 0.000 NA   NA
 5830000 5830001 SPN23F_01160 SPN23F_01170     FALSE 0.120 117.000 0.000 NA   NA
 5830001 5830002 SPN23F_01170 SPN23F_01180   sdhA TRUE 0.904 22.000 0.033 1.000   NA
 5830002 5830003 SPN23F_01180 SPN23F_01190 sdhA sdhB TRUE 0.995 9.000 0.221 0.001 Y NA
 5830006 5830007 SPN23F_01202 SPN23F_01210     TRUE 0.911 52.000 0.353 NA   NA
 5830007 5830008 SPN23F_01210 SPN23F_01220     TRUE 0.993 -3.000 0.520 NA   NA
 5830008 5830009 SPN23F_01220 SPN23F_01230     FALSE 0.060 207.000 0.000 1.000 N NA
 5830009 5830010 SPN23F_01230 SPN23F_01240     TRUE 0.843 17.000 0.000 NA   NA
 5830011 5830012 SPN23F_01201 SPN23F_01250     FALSE 0.068 617.000 0.000 NA   NA
 5830013 5830014 SPN23F_01260 SPN23F_01270     TRUE 0.935 0.000 0.000 NA   NA
 5830014 5830015 SPN23F_01270 SPN23F_01280     FALSE 0.070 1135.000 0.000 NA   NA
 5830015 5830016 SPN23F_01280 SPN23F_01290   pspA FALSE 0.067 549.000 0.000 NA   NA
 5830016 5830017 SPN23F_01290 SPN23F_01320 pspA   FALSE 0.066 401.000 0.000 NA   NA
 5830017 5830018 SPN23F_01320 SPN23F_01330     FALSE 0.108 141.000 0.003 1.000 N NA
 5830018 5830019 SPN23F_01330 SPN23F_01340   gidA TRUE 0.912 10.000 0.005 1.000 N NA
 5830020 5830021 SPN23F_01350 SPN23F_01360     TRUE 0.993 2.000 0.576 NA   NA
 5830021 5830022 SPN23F_01360 SPN23F_01361   ccs1 FALSE 0.064 329.000 0.000 NA   NA
 5830022 5830023 SPN23F_01361 SPN23F_01370 ccs1   FALSE 0.065 247.000 0.000 NA   NA
 5830023 5830024 SPN23F_01370 SPN23F_01380     TRUE 0.992 2.000 0.500 NA   NA
 5830025 5830026 SPN23F_01390 SPN23F_01400     TRUE 0.988 -3.000 0.209 1.000   NA
 5830026 5830027 SPN23F_01400 SPN23F_01410     TRUE 0.971 -10.000 0.030 1.000   NA
 5830028 5830029 SPN23F_01420 SPN23F_01430     TRUE 0.934 -9.000 0.000 NA   NA
 5830029 5830030 SPN23F_01430 SPN23F_01440     FALSE 0.066 407.000 0.000 NA   NA
 5830031 5830032 SPN23F_01440a SPN23F_01460     TRUE 0.936 -7.000 0.000 NA   NA
 5830032 5830033 SPN23F_01460 SPN23F_01470     TRUE 0.859 10.000 0.000 NA N NA
 5830033 5830034 SPN23F_01470 SPN23F_01471     TRUE 0.810 20.000 0.000 NA   NA
 5830034 5830035 SPN23F_01471 SPN23F_01480     TRUE 0.680 39.000 0.000 NA   NA
 5830035 5830036 SPN23F_01480 SPN23F_01490     TRUE 0.878 12.000 0.000 NA   NA
 5830036 5830037 SPN23F_01490 SPN23F_01500   ugd TRUE 0.875 13.000 0.000 NA   NA
 5830037 5830038 SPN23F_01500 SPN23F_01510 ugd   FALSE 0.070 396.000 0.000 1.000   NA
 5830038 5830039 SPN23F_01510 SPN23F_01520     FALSE 0.064 286.000 0.000 NA   NA
 5830039 5830040 SPN23F_01520 SPN23F_01530     TRUE 0.398 67.000 0.000 NA   NA
 5830040 5830041 SPN23F_01530 SPN23F_01540     TRUE 0.337 72.000 0.000 NA   NA
 5830041 5830042 SPN23F_01540 SPN23F_01550     FALSE 0.066 453.000 0.000 NA   NA
 5830042 5830043 SPN23F_01550 SPN23F_01560     TRUE 0.990 -10.000 0.338 NA   NA
 5830043 5830044 SPN23F_01560 SPN23F_01570     FALSE 0.115 218.000 0.013 NA   NA
 5830044 5830045 SPN23F_01570 SPN23F_01580     FALSE 0.066 154.000 0.000 NA N NA
 5830045 5830046 SPN23F_01580 SPN23F_01590     TRUE 0.615 100.000 0.500 NA N NA
 5830046 5830047 SPN23F_01590 SPN23F_01600     TRUE 0.971 -7.000 0.042 1.000 N NA
 5830047 5830048 SPN23F_01600 SPN23F_01610     TRUE 0.998 2.000 0.938 1.000 Y NA
 5830050 5830051 SPN23F_01630 SPN23F_01640     TRUE 0.949 50.000 0.667 NA   NA
 5830051 5830052 SPN23F_01640 SPN23F_01650     TRUE 0.994 12.000 0.227 0.014 Y NA
 5830052 5830053 SPN23F_01650 SPN23F_01660     TRUE 0.748 61.000 0.091 NA   NA
 5830053 5830054 SPN23F_01660 SPN23F_01670     TRUE 0.727 78.000 0.286 NA   NA
 5830055 5830056 SPN23F_01680 SPN23F_01690     FALSE 0.064 310.000 0.000 NA   NA
 5830056 5830057 SPN23F_01690 SPN23F_01700     TRUE 0.992 -3.000 0.392 NA   NA
 5830059 5830060 SPN23F_01720 SPN23F_01730 ribH ribA TRUE 0.995 1.000 0.054 0.003 Y NA
 5830060 5830061 SPN23F_01730 SPN23F_01740 ribA ribE TRUE 0.972 20.000 0.051 1.000 Y NA
 5830061 5830062 SPN23F_01740 SPN23F_01750 ribE ribD TRUE 0.997 -15.000 0.456 1.000 Y NA
 5830062 5830063 SPN23F_01750 SPN23F_s02 ribD   FALSE 0.095 134.000 0.000 NA   NA
 5830064 5830065 SPN23F_01760 SPN23F_01770 ruvA tag TRUE 0.978 10.000 0.012 1.000 Y NA
 5830065 5830066 SPN23F_01770 SPN23F_01780 tag   TRUE 0.956 -3.000 0.004 NA   NA
 5830067 5830068 SPN23F_01790 SPN23F_01800     FALSE 0.064 255.000 0.000 NA   NA
 5830068 5830069 SPN23F_01800 SPN23F_01810     TRUE 0.958 12.000 0.072 NA   NA
 5830070 5830071 SPN23F_01820 SPN23F_01830 uvrA   TRUE 0.955 -7.000 0.008 1.000 N NA
 5830071 5830072 SPN23F_01830 SPN23F_01840     FALSE 0.084 132.000 0.000 1.000 N NA
 5830072 5830073 SPN23F_01840 SPN23F_01850     TRUE 0.814 66.000 0.267 NA   NA
 5830073 5830074 SPN23F_01850 SPN23F_01860     TRUE 0.347 87.000 0.016 NA   NA
 5830074 5830075 SPN23F_01860 SPN23F_01870     TRUE 0.986 13.000 0.537 NA   NA
 5830075 5830076 SPN23F_01870 SPN23F_01880     TRUE 0.985 16.000 0.651 NA   NA
 5830076 5830077 SPN23F_01880 SPN23F_01890     FALSE 0.122 258.000 0.019 NA   NA
 5830077 5830078 SPN23F_01890 SPN23F_01900     TRUE 0.240 84.000 0.000 NA   NA
 5830078 5830079 SPN23F_01900 SPN23F_01910     FALSE 0.085 146.000 0.000 NA   NA
 5830079 5830080 SPN23F_01910 SPN23F_01920     FALSE 0.064 258.000 0.000 NA   NA
 5830080 5830081 SPN23F_01920 SPN23F_01930   nrdD TRUE 0.270 120.000 0.057 NA   NA
 5830081 5830082 SPN23F_01930 SPN23F_01940 nrdD   TRUE 0.956 12.000 0.062 NA   NA
 5830082 5830083 SPN23F_01940 SPN23F_01950     TRUE 0.921 44.000 0.292 NA   NA
 5830083 5830084 SPN23F_01950 SPN23F_01960   nrdG TRUE 0.986 -7.000 0.159 1.000   NA
 5830084 5830085 SPN23F_01960 SPN23F_01970 nrdG   TRUE 0.968 -3.000 0.029 1.000 N NA
 5830085 5830086 SPN23F_01970 SPN23F_01980   rpsJ FALSE 0.056 267.000 0.000 1.000 N NA
 5830086 5830087 SPN23F_01980 SPN23F_01990 rpsJ rplC TRUE 0.705 216.000 0.467 0.036 Y NA
 5830087 5830088 SPN23F_01990 SPN23F_02000 rplC rplD TRUE 0.992 25.000 0.544 0.026 Y NA
 5830088 5830089 SPN23F_02000 SPN23F_02010 rplD rplW TRUE 0.997 0.000 0.307 0.026 Y NA
 5830089 5830090 SPN23F_02010 SPN23F_02020 rplW rplB TRUE 0.996 18.000 0.849 0.034 Y NA
 5830090 5830091 SPN23F_02020 SPN23F_02030 rplB rpsS TRUE 0.901 104.000 0.820 0.036 Y NA
 5830091 5830092 SPN23F_02030 SPN23F_02040 rpsS rplV TRUE 0.997 12.000 0.769 0.036 Y NA
 5830092 5830093 SPN23F_02040 SPN23F_02050 rplV rpsC TRUE 0.997 13.000 0.719 0.036 Y NA
 5830093 5830094 SPN23F_02050 SPN23F_02060 rpsC rplP TRUE 0.998 4.000 0.828 0.036 Y NA
 5830094 5830095 SPN23F_02060 SPN23F_02070 rplP rpmC TRUE 0.997 10.000 0.802 0.026 Y NA
 5830095 5830096 SPN23F_02070 SPN23F_02080 rpmC rpsQ TRUE 0.994 25.000 0.828 0.026 Y NA
 5830096 5830097 SPN23F_02080 SPN23F_02090 rpsQ rplN TRUE 0.993 26.000 0.791 0.036 Y NA
 5830097 5830098 SPN23F_02090 SPN23F_02100 rplN rplX TRUE 0.954 78.000 0.810 0.036 Y NA
 5830098 5830099 SPN23F_02100 SPN23F_02110 rplX rplE TRUE 0.994 24.000 0.758 0.026 Y NA
 5830099 5830100 SPN23F_02110 SPN23F_02120 rplE   TRUE 0.993 18.000 0.309 0.026 Y NA
 5830100 5830101 SPN23F_02120 SPN23F_02130   rpsH TRUE 0.640 285.000 0.295 0.026 Y NA
 5830101 5830102 SPN23F_02130 SPN23F_02140 rpsH rplF TRUE 0.799 192.000 0.808 0.026 Y NA
 5830102 5830103 SPN23F_02140 SPN23F_02150 rplF rplR TRUE 0.944 84.000 0.815 0.026 Y NA
 5830103 5830104 SPN23F_02150 SPN23F_02160 rplR rpsE TRUE 0.996 18.000 0.814 0.036 Y NA
 5830104 5830105 SPN23F_02160 SPN23F_02170 rpsE rpmD TRUE 0.997 14.000 0.789 0.036 Y NA
 5830105 5830106 SPN23F_02170 SPN23F_02180 rpmD rplO TRUE 0.819 145.000 0.653 0.005 Y NA
 5830106 5830107 SPN23F_02180 SPN23F_02190 rplO secY TRUE 0.988 13.000 0.730 1.000 N NA
 5830107 5830108 SPN23F_02190 SPN23F_02200 secY adk TRUE 0.330 151.000 0.241 1.000 N NA
 5830108 5830109 SPN23F_02200 SPN23F_02210 adk infA TRUE 0.267 117.000 0.059 1.000 N NA
 5830109 5830110 SPN23F_02210 SPN23F_02220 infA rpsM TRUE 0.533 159.000 0.075 0.034 Y NA
 5830110 5830111 SPN23F_02220 SPN23F_02230 rpsM rpsK TRUE 0.996 18.000 0.810 0.026 Y NA
 5830111 5830112 SPN23F_02230 SPN23F_02240 rpsK rpoA TRUE 0.921 43.000 0.308 1.000 N NA
 5830112 5830113 SPN23F_02240 SPN23F_02250 rpoA rplQ TRUE 0.990 12.000 0.873 1.000 N NA
 5830113 5830114 SPN23F_02250 SPN23F_02260 rplQ   FALSE 0.073 265.000 0.002 1.000 N NA
 5830114 5830115 SPN23F_02260 SPN23F_02270     TRUE 0.988 10.000 0.569 NA   NA
 5830115 5830116 SPN23F_02270 SPN23F_02280     FALSE 0.103 244.000 0.008 NA   NA
 5830117 5830118 SPN23F_02290 SPN23F_02300     TRUE 0.962 -3.000 0.000 0.051   NA
 5830118 5830119 SPN23F_02300 SPN23F_02310     TRUE 0.834 27.000 0.000 0.051   NA
 5830119 5830120 SPN23F_02310 SPN23F_02320     TRUE 0.986 -10.000 0.000 0.051 Y NA
 5830120 5830121 SPN23F_02320 SPN23F_02330     FALSE 0.171 97.000 0.000 NA   NA
 5830121 5830122 SPN23F_02330 SPN23F_02341     FALSE 0.067 217.000 0.000 NA   NA
 5830122 5830123 SPN23F_02341 SPN23F_02350     TRUE 0.330 75.000 0.000 1.000   NA
 5830124 5830125 SPN23F_02360 SPN23F_02370     TRUE 0.992 13.000 0.188 0.038 Y NA
 5830125 5830126 SPN23F_02370 SPN23F_02380     TRUE 0.193 195.000 0.091 1.000 N NA
 5830126 5830127 SPN23F_02380 SPN23F_02390     TRUE 0.990 46.000 0.889 0.021 Y NA
 5830127 5830128 SPN23F_02390 SPN23F_02400     TRUE 0.997 17.000 0.889 0.021 Y NA
 5830128 5830129 SPN23F_02400 SPN23F_02410   pflD TRUE 0.252 151.000 0.132 1.000 N NA
 5830129 5830130 SPN23F_02410 SPN23F_02420 pflD fsaA TRUE 0.970 19.000 0.368 1.000 N NA
 5830130 5830131 SPN23F_02420 SPN23F_02430 fsaA gldA TRUE 0.961 18.000 0.211 1.000 N NA
 5830131 5830132 SPN23F_02430 SPN23F_02440 gldA leuS FALSE 0.058 455.000 0.000 1.000 N NA
 5830132 5830133 SPN23F_02440 SPN23F_02450 leuS   TRUE 0.221 194.000 0.000 1.000 Y NA
 5830133 5830134 SPN23F_02450 SPN23F_02460     TRUE 0.967 12.000 0.037 0.014   NA
 5830134 5830135 SPN23F_02460 SPN23F_02470   ruvB FALSE 0.075 1068.000 0.000 1.000   NA
 5830135 5830136 SPN23F_02470 SPN23F_02480 ruvB   TRUE 0.947 -19.000 0.004 NA   NA
 5830136 5830137 SPN23F_02480 SPN23F_02490   uppS FALSE 0.066 231.000 0.000 NA   NA
 5830137 5830138 SPN23F_02490 SPN23F_02500 uppS   TRUE 0.989 9.000 0.113 1.000 Y NA
 5830138 5830139 SPN23F_02500 SPN23F_02510   eep TRUE 0.895 22.000 0.040 1.000 N NA
 5830139 5830140 SPN23F_02510 SPN23F_02520 eep proS TRUE 0.957 13.000 0.095 1.000 N NA
 5830140 5830141 SPN23F_02520 SPN23F_02530 proS   FALSE 0.142 100.000 0.000 1.000 N NA
 5830141 5830142 SPN23F_02530 SPN23F_02540   glmS FALSE 0.062 192.000 0.000 1.000 N NA
 5830142 5830143 SPN23F_02540 SPN23F_02550 glmS   FALSE 0.094 119.000 0.000 NA N NA
 5830145 5830146 SPN23F_02570 SPN23F_02580 rpsL rpsG TRUE 0.990 20.000 0.224 0.005 Y NA
 5830146 5830147 SPN23F_02580 SPN23F_02590 rpsG fus TRUE 0.668 395.000 0.579 1.000 Y NA
 5830147 5830148 SPN23F_02590 SPN23F_02600 fus polC TRUE 0.180 104.000 0.003 1.000 N NA
 5830150 5830151 SPN23F_02620 SPN23F_02630     TRUE 0.936 -7.000 0.000 NA   NA
 5830151 5830152 SPN23F_02630 SPN23F_02650     TRUE 0.804 21.000 0.000 NA   NA
 5830152 5830153 SPN23F_02650 SPN23F_02660   pepS TRUE 0.931 22.000 0.095 NA   NA
 5830153 5830154 SPN23F_02660 SPN23F_02670 pepS   TRUE 0.976 10.000 0.190 1.000   NA
 5830154 5830155 SPN23F_02670 SPN23F_02680     FALSE 0.069 269.000 0.000 1.000   NA
 5830155 5830156 SPN23F_02680 SPN23F_02690   pepC FALSE 0.140 217.000 0.041 1.000 N NA
 5830157 5830158 SPN23F_02700 SPN23F_02710 manN manM TRUE 0.994 24.000 0.812 0.027 Y NA
 5830158 5830159 SPN23F_02710 SPN23F_02720 manM manL TRUE 0.994 28.000 0.943 0.027 Y NA
 5830159 5830160 SPN23F_02720 SPN23F_02730 manL adhP FALSE 0.071 233.000 0.000 1.000   NA
 5830160 5830161 SPN23F_02730 SPN23F_02750 adhP   FALSE 0.069 339.000 0.000 1.000   NA
 5830162 5830163 SPN23F_02760 SPN23F_02770     TRUE 0.753 53.000 0.034 NA   NA
 5830163 5830164 SPN23F_02770 SPN23F_02780   folP TRUE 0.204 90.000 0.000 NA   NA
 5830164 5830165 SPN23F_02780 SPN23F_02790 folP folC TRUE 0.990 2.000 0.006 0.005 Y NA
 5830165 5830166 SPN23F_02790 SPN23F_02800 folC folE TRUE 0.988 -19.000 0.024 1.000 Y NA
 5830166 5830167 SPN23F_02800 SPN23F_02810 folE   TRUE 0.303 159.000 0.005 1.000 Y NA
 5830169 5830170 SPN23F_02830 SPN23F_02840 rplM rpsI TRUE 0.995 19.000 0.601 0.026 Y NA
 5830172 5830173 SPN23F_02860 SPN23F_02870     FALSE 0.066 401.000 0.000 NA   NA
 5830175 5830176 SPN23F_02890 SPN23F_02900     FALSE 0.066 427.000 0.000 NA   NA
 5830177 5830178 SPN23F_02910 SPN23F_02920 kgdA   TRUE 0.990 10.000 0.167 1.000 Y NA
 5830178 5830179 SPN23F_02920 SPN23F_02930     TRUE 0.964 31.000 0.094 1.000 Y NA
 5830179 5830180 SPN23F_02930 SPN23F_02940   idnO TRUE 0.955 19.000 0.197 1.000 N NA
 5830181 5830182 SPN23F_02950 SPN23F_02960   ugl TRUE 0.972 12.000 0.160 1.000   NA
 5830182 5830183 SPN23F_02960 SPN23F_02970 ugl agaV TRUE 0.980 11.000 0.267 1.000   NA
 5830183 5830184 SPN23F_02970 SPN23F_02980 agaV agaW TRUE 0.997 15.000 0.933 0.027 Y NA
 5830184 5830185 SPN23F_02980 SPN23F_02990 agaW agaD TRUE 0.999 -13.000 0.933 0.027 Y NA
 5830185 5830186 SPN23F_02990 SPN23F_03000 agaD   TRUE 0.771 27.000 0.002 NA N NA
 5830186 5830187 SPN23F_03000 SPN23F_03010     TRUE 0.855 22.000 0.006 NA   NA
 5830187 5830188 SPN23F_03010 SPN23F_03020     TRUE 0.904 60.000 0.562 NA   NA
 5830189 5830190 SPN23F_03030 SPN23F_03040     TRUE 0.879 11.000 0.000 NA   NA
 5830190 5830191 SPN23F_03040 SPN23F_03050     TRUE 0.852 16.000 0.000 NA   NA
 5830192 5830193 SPN23F_03060 SPN23F_03070 mraW ftsL TRUE 0.955 12.000 0.077 1.000 N NA
 5830193 5830194 SPN23F_03070 SPN23F_03080 ftsL pbpX TRUE 0.988 4.000 0.456 1.000 N NA
 5830194 5830195 SPN23F_03080 SPN23F_03090 pbpX mraY TRUE 0.989 2.000 0.038 1.000 Y NA
 5830195 5830196 SPN23F_03090 SPN23F_03110 mraY clpL FALSE 0.059 609.000 0.000 1.000 N NA
 5830196 5830197 SPN23F_03110 SPN23F_03120 clpL   FALSE 0.066 436.000 0.000 NA   NA
 5830197 5830198 SPN23F_03120 SPN23F_s03     TRUE 0.935 0.000 0.000 NA   NA
 5830199 5830200 SPN23F_03130 SPN23F_03140 luxS   TRUE 0.260 95.000 0.006 NA   NA
 5830201 5830202 SPN23F_03150 SPN23F_03160 dexB aliB FALSE 0.079 159.000 0.000 NA   NA
 5830204 5830205 SPN23F_03180 SPN23F_03190 wzg wzh TRUE 0.992 2.000 0.583 1.000 N NA
 5830205 5830206 SPN23F_03190 SPN23F_03200 wzh wzd TRUE 0.996 9.000 0.636 1.000 Y NA
 5830206 5830207 SPN23F_03200 SPN23F_03210 wzd wze TRUE 0.990 10.000 0.800 1.000 N NA
 5830207 5830208 SPN23F_03210 SPN23F_03220 wze wchA TRUE 0.943 15.000 0.067 NA N NA
 5830208 5830209 SPN23F_03220 SPN23F_03230 wchA wchF TRUE 0.959 31.000 0.067 NA Y NA
 5830209 5830210 SPN23F_03230 SPN23F_03250 wchF wzy FALSE 0.064 300.000 0.000 NA   NA
 5830210 5830211 SPN23F_03250 SPN23F_03260 wzy wchV TRUE 0.974 4.000 0.105 NA   NA
 5830211 5830212 SPN23F_03260 SPN23F_03270 wchV wchW TRUE 0.876 7.000 0.000 NA N NA
 5830212 5830213 SPN23F_03270 SPN23F_03280 wchW wzx TRUE 0.926 2.000 0.000 NA   NA
 5830213 5830214 SPN23F_03280 SPN23F_03290 wzx wchX TRUE 0.974 8.000 0.065 0.093   NA
 5830214 5830215 SPN23F_03290 SPN23F_03300 wchX wchY TRUE 0.669 36.000 0.000 1.000 N NA
 5830215 5830216 SPN23F_03300 SPN23F_03310 wchY wchZ TRUE 0.834 16.000 0.000 1.000 N NA
 5830216 5830217 SPN23F_03310 SPN23F_03320 wchZ wciA TRUE 0.843 15.000 0.000 1.000 N NA
 5830217 5830218 SPN23F_03320 SPN23F_03330 wciA rmlA FALSE 0.069 160.000 0.000 1.000 N NA
 5830218 5830219 SPN23F_03330 SPN23F_03340 rmlA rmlC TRUE 0.994 1.000 0.149 1.000 Y NA
 5830219 5830220 SPN23F_03340 SPN23F_03350 rmlC rmlB TRUE 0.993 13.000 0.350 1.000 Y NA
 5830220 5830221 SPN23F_03350 SPN23F_03360 rmlB rmlD TRUE 0.950 66.000 0.273 0.004 Y NA
 5830221 5830222 SPN23F_03360 SPN23F_03370 rmlD   TRUE 0.306 76.000 0.000 NA   NA
 5830222 5830223 SPN23F_03370 SPN23F_03390   aliA FALSE 0.067 536.000 0.000 NA   NA
 5830223 5830224 SPN23F_03390 SPN23F_03400 aliA   FALSE 0.069 301.000 0.000 1.000   NA
 5830225 5830226 SPN23F_03410 SPN23F_03420 pbp1A recU TRUE 0.991 -3.000 0.319 1.000   NA
 5830227 5830228 SPN23F_03430 SPN23F_03440     TRUE 0.859 70.000 0.579 NA   NA
 5830228 5830229 SPN23F_03440 SPN23F_s04     TRUE 0.804 21.000 0.000 NA   NA
 5830229 5830230 SPN23F_s04 SPN23F_03450     TRUE 0.262 82.000 0.000 NA   NA
 5830230 5830231 SPN23F_03450 SPN23F_03460     TRUE 0.940 13.000 0.029 NA   NA
 5830231 5830232 SPN23F_03460 SPN23F_03470   gnd TRUE 0.397 76.000 0.005 NA   NA
 5830232 5830233 SPN23F_03470 SPN23F_03480 gnd csrR TRUE 0.919 12.000 0.012 1.000 N NA
 5830233 5830234 SPN23F_03480 SPN23F_03490 csrR cbpJ FALSE 0.165 99.000 0.000 NA   NA
 5830235 5830236 SPN23F_03500 SPN23F_03510     FALSE 0.079 159.000 0.000 NA   NA
 5830237 5830238 SPN23F_03520 SPN23F_03530   mvaK1 FALSE 0.112 122.000 0.000 NA   NA
 5830238 5830239 SPN23F_03530 SPN23F_03540 mvaK1 mvaD TRUE 0.997 -18.000 0.281 0.005 Y NA
 5830239 5830240 SPN23F_03540 SPN23F_03550 mvaD mvaK2 TRUE 0.997 -13.000 0.312 0.005 Y NA
 5830240 5830241 SPN23F_03550 SPN23F_03560 mvaK2 fni TRUE 0.976 -16.000 0.097 1.000 N NA
 5830241 5830242 SPN23F_03560 SPN23F_03570 fni   TRUE 0.392 77.000 0.005 NA   NA
 5830242 5830243 SPN23F_03570 SPN23F_03580     TRUE 0.995 -3.000 0.679 NA   NA
 5830243 5830244 SPN23F_03580 SPN23F_03590     TRUE 0.997 14.000 0.853 0.013 Y NA
 5830244 5830245 SPN23F_03590 SPN23F_03600     TRUE 0.931 1.000 0.000 NA   NA
 5830245 5830246 SPN23F_03600 SPN23F_03630     FALSE 0.084 150.000 0.000 NA   NA
 5830246 5830247 SPN23F_03630 SPN23F_03640   cbpG TRUE 0.268 81.000 0.000 NA   NA
 5830247 5830248 SPN23F_03640 SPN23F_03650 cbpG cbpF TRUE 0.822 19.000 0.000 NA   NA
 5830249 5830250 SPN23F_03660 SPN23F_03680     TRUE 0.935 0.000 0.000 NA   NA
 5830251 5830252 SPN23F_03700 SPN23F_03710 mtlA mtlR TRUE 0.731 87.000 0.336 0.021 N NA
 5830252 5830253 SPN23F_03710 SPN23F_03720 mtlR mtlF TRUE 0.986 2.000 0.131 0.021 N NA
 5830253 5830254 SPN23F_03720 SPN23F_03730 mtlF mtlD TRUE 0.877 62.000 0.062 1.000 Y NA
 5830254 5830255 SPN23F_03730 SPN23F_03750 mtlD   FALSE 0.065 382.000 0.000 NA   NA
 5830255 5830256 SPN23F_03750 SPN23F_03760   tig FALSE 0.064 304.000 0.000 NA   NA
 5830257 5830258 SPN23F_03770 SPN23F_03790   spi TRUE 0.182 279.000 0.099 1.000 N NA
 5830258 5830259 SPN23F_03790 SPN23F_03800 spi   TRUE 0.955 12.000 0.080 1.000 N NA
 5830260 5830261 SPN23F_03810 SPN23F_03820     TRUE 0.968 -3.000 0.019 NA   NA
 5830261 5830262 SPN23F_03820 SPN23F_03830   mutS2 TRUE 0.369 104.000 0.070 1.000   NA
 5830262 5830263 SPN23F_03830 SPN23F_s05 mutS2   FALSE 0.078 164.000 0.000 NA   NA
 5830263 5830264 SPN23F_s05 SPN23F_03840     TRUE 0.198 91.000 0.000 NA   NA
 5830264 5830265 SPN23F_03840 SPN23F_03850     FALSE 0.067 218.000 0.000 NA   NA
 5830265 5830266 SPN23F_03850 SPN23F_03860     FALSE 0.141 110.000 0.000 NA   NA
 5830267 5830268 SPN23F_03870 SPN23F_03880 serS   FALSE 0.091 214.000 0.003 NA   NA
 5830268 5830269 SPN23F_03880 SPN23F_03890     TRUE 0.950 3.000 0.010 NA   NA
 5830270 5830271 SPN23F_03900 SPN23F_03910     TRUE 0.428 94.000 0.098 1.000 N NA
 5830271 5830272 SPN23F_03910 SPN23F_03920   fabH TRUE 0.976 0.000 0.070 1.000 N NA
 5830272 5830273 SPN23F_03920 SPN23F_03930 fabH acpP TRUE 0.824 60.000 0.065 0.008   NA
 5830273 5830274 SPN23F_03930 SPN23F_03940 acpP fabK TRUE 0.430 119.000 0.216 1.000   NA
 5830274 5830275 SPN23F_03940 SPN23F_03950 fabK fabD TRUE 0.982 -7.000 0.099 1.000   NA
 5830275 5830276 SPN23F_03950 SPN23F_03960 fabD fabG TRUE 0.988 34.000 0.432 0.008 Y NA
 5830276 5830277 SPN23F_03960 SPN23F_03970 fabG fabF TRUE 0.970 22.000 0.056 1.000 Y NA
 5830277 5830278 SPN23F_03970 SPN23F_03980 fabF fabE TRUE 0.990 3.000 0.074 1.000 Y NA
 5830278 5830279 SPN23F_03980 SPN23F_03990 fabE fabZ TRUE 0.995 -3.000 0.047 0.008 Y NA
 5830279 5830280 SPN23F_03990 SPN23F_04000 fabZ accC TRUE 0.983 12.000 0.045 1.000 Y NA
 5830280 5830281 SPN23F_04000 SPN23F_04010 accC accD TRUE 0.958 37.000 0.090 1.000 Y NA
 5830281 5830282 SPN23F_04010 SPN23F_04020 accD accA TRUE 0.997 -3.000 0.234 0.002 Y NA
 5830282 5830283 SPN23F_04020 SPN23F_04030 accA   FALSE 0.088 263.000 0.003 NA   NA
 5830283 5830284 SPN23F_04030 SPN23F_04040     TRUE 0.988 18.000 1.000 NA   NA
 5830284 5830285 SPN23F_04040 SPN23F_04050     TRUE 0.539 55.000 0.000 NA   NA
 5830286 5830287 SPN23F_04060 SPN23F_04070 nusB   TRUE 0.989 -7.000 0.265 NA   NA
 5830287 5830288 SPN23F_04070 SPN23F_04080   efp TRUE 0.898 22.000 0.031 NA   NA
 5830288 5830289 SPN23F_04080 SPN23F_04090 efp gatB TRUE 0.292 129.000 0.000 1.000 Y NA
 5830289 5830290 SPN23F_04090 SPN23F_04100 gatB gatA TRUE 0.998 0.000 0.492 0.002 Y NA
 5830290 5830291 SPN23F_04100 SPN23F_04110 gatA gatC TRUE 0.999 0.000 0.643 0.002 Y NA
 5830292 5830293 SPN23F_04120 SPN23F_04130 prfC   FALSE 0.069 269.000 0.000 1.000   NA
 5830293 5830294 SPN23F_04130 SPN23F_04140   rpmB FALSE 0.132 116.000 0.000 1.000   NA
 5830294 5830295 SPN23F_04140 SPN23F_04150 rpmB   TRUE 0.184 157.000 0.044 NA   NA
 5830295 5830296 SPN23F_04150 SPN23F_04160     TRUE 0.991 3.000 0.567 NA   NA
 5830296 5830297 SPN23F_04160 SPN23F_04170   alsS FALSE 0.106 200.000 0.004 1.000   NA
 5830297 5830298 SPN23F_04170 SPN23F_04180 alsS ilvH TRUE 0.998 -7.000 0.249 0.001 Y NA
 5830298 5830299 SPN23F_04180 SPN23F_04190 ilvH ilvC TRUE 0.927 66.000 0.130 0.003 Y NA
 5830299 5830300 SPN23F_04190 SPN23F_04200 ilvC   FALSE 0.144 107.000 0.000 NA   NA
 5830300 5830301 SPN23F_04200 SPN23F_04210     TRUE 0.843 17.000 0.000 NA   NA
 5830301 5830302 SPN23F_04210 SPN23F_04220   ilvA TRUE 0.608 50.000 0.000 NA   NA
 5830302 5830303 SPN23F_04220 SPN23F_04240 ilvA   FALSE 0.070 871.000 0.000 NA   NA
 5830304 5830305 SPN23F_04250 SPN23F_04260 glnQ2   TRUE 0.998 0.000 0.758 1.000 Y NA
 5830311 5830312 SPN23F_04330 SPN23F_04340     FALSE 0.064 327.000 0.000 NA   NA
 5830314 5830315 SPN23F_04360 SPN23F_04370     TRUE 0.983 16.000 0.017 0.005 Y NA
 5830316 5830317 SPN23F_04380 SPN23F_04390     TRUE 0.951 15.000 0.068 NA   NA
 5830317 5830318 SPN23F_04390 SPN23F_04400     TRUE 0.899 7.000 0.000 NA   NA
 5830318 5830319 SPN23F_04400 SPN23F_04410     FALSE 0.154 102.000 0.000 NA   NA
 5830319 5830320 SPN23F_04410 SPN23F_04420     TRUE 0.993 -15.000 0.530 1.000   NA
 5830320 5830321 SPN23F_04420 SPN23F_04430     FALSE 0.092 193.000 0.005 1.000 N NA
 5830321 5830322 SPN23F_04430 SPN23F_s06     TRUE 0.552 54.000 0.000 NA   NA
 5830322 5830323 SPN23F_s06 SPN23F_04440     FALSE 0.077 165.000 0.000 NA   NA
 5830323 5830324 SPN23F_04440 SPN23F_04450     TRUE 0.994 -10.000 0.600 NA   NA
 5830324 5830325 SPN23F_04450 SPN23F_04460     TRUE 0.919 28.000 0.105 1.000   NA
 5830325 5830326 SPN23F_04460 SPN23F_04470     TRUE 0.912 5.000 0.000 1.000   NA
 5830326 5830327 SPN23F_04470 SPN23F_04480   rpoE FALSE 0.089 128.000 0.000 1.000 N NA
 5830327 5830328 SPN23F_04480 SPN23F_04500 rpoE pyrG FALSE 0.124 390.000 0.029 1.000 N NA
 5830330 5830331 SPN23F_04520 SPN23F_04530   pgk TRUE 0.535 90.000 0.002 1.000 Y NA
 5830331 5830332 SPN23F_04530 SPN23F_04540 pgk   FALSE 0.118 136.000 0.002 NA   NA
 5830332 5830333 SPN23F_04540 SPN23F_04550   glnR TRUE 0.656 77.000 0.154 NA   NA
 5830333 5830334 SPN23F_04550 SPN23F_04560 glnR glnA TRUE 0.908 37.000 0.179 1.000 N NA
 5830334 5830335 SPN23F_04560 SPN23F_04590 glnA   FALSE 0.061 796.000 0.000 1.000 N NA
 5830336 5830337 SPN23F_04591 SPN23F_04600     TRUE 0.922 11.000 0.000 0.071   NA
 5830337 5830338 SPN23F_04600 SPN23F_04610     TRUE 0.594 57.000 0.000 0.071 N NA
 5830338 5830339 SPN23F_04610 SPN23F_04620     TRUE 0.993 0.000 0.045 0.071 Y NA
 5830339 5830340 SPN23F_04620 SPN23F_04630     TRUE 0.996 13.000 0.564 0.071 Y NA
 5830341 5830342 SPN23F_04640 SPN23F_04650     TRUE 0.705 35.000 0.000 NA   NA
 5830342 5830343 SPN23F_04650 SPN23F_04660   hrcA FALSE 0.107 164.000 0.003 NA   NA
 5830343 5830344 SPN23F_04660 SPN23F_04670 hrcA grpE TRUE 0.881 27.000 0.051 1.000 N NA
 5830344 5830345 SPN23F_04670 SPN23F_04680 grpE dnaK TRUE 0.431 480.000 0.026 0.006 Y NA
 5830345 5830346 SPN23F_04680 SPN23F_04690 dnaK   TRUE 0.926 2.000 0.000 NA   NA
 5830346 5830347 SPN23F_04690 SPN23F_04700   dnaJ FALSE 0.066 402.000 0.000 NA   NA
 5830348 5830349 SPN23F_04710 SPN23F_04720     FALSE 0.064 255.000 0.000 NA   NA
 5830349 5830350 SPN23F_04720 SPN23F_04730     TRUE 0.959 10.000 0.063 NA   NA
 5830351 5830352 SPN23F_04740 SPN23F_04750     TRUE 0.984 -3.000 0.167 NA N NA
 5830354 5830355 SPN23F_04770 SPN23F_04780 blpS blpR TRUE 0.989 5.000 0.500 NA   NA
 5830355 5830356 SPN23F_04780 SPN23F_04790 blpR blpH TRUE 0.993 14.000 0.444 NA Y NA
 5830357 5830358 SPN23F_04791 SPN23F_04800 blpC blpB TRUE 0.876 57.000 0.250 1.000   NA
 5830358 5830359 SPN23F_04800 SPN23F_04810 blpB blpA1 TRUE 0.988 11.000 0.375 0.068   NA
 5830359 5830360 SPN23F_04810 SPN23F_04820 blpA1 blpA2 TRUE 0.986 17.000 0.500 0.066   NA
 5830361 5830362 SPN23F_04830 SPN23F_04831 blpI pncB TRUE 0.905 5.000 0.000 NA   NA
 5830362 5830363 SPN23F_04831 SPN23F_04832 pncB pncC TRUE 0.905 5.000 0.000 NA   NA
 5830363 5830364 SPN23F_04832 SPN23F_04840 pncC blpJ FALSE 0.085 147.000 0.000 NA   NA
 5830364 5830365 SPN23F_04840 SPN23F_04850 blpJ blpK TRUE 0.373 69.000 0.000 NA   NA
 5830365 5830366 SPN23F_04850 SPN23F_04851 blpK pncK TRUE 0.822 19.000 0.000 NA   NA
 5830366 5830367 SPN23F_04851 SPN23F_04860 pncK   TRUE 0.852 16.000 0.000 NA   NA
 5830367 5830368 SPN23F_04860 SPN23F_04880     TRUE 0.917 3.000 0.000 NA   NA
 5830368 5830369 SPN23F_04880 SPN23F_04890     FALSE 0.132 113.000 0.000 NA   NA
 5830369 5830370 SPN23F_04890 SPN23F_04900   pncG TRUE 0.385 68.000 0.000 NA   NA
 5830370 5830371 SPN23F_04900 SPN23F_04910 pncG blpL TRUE 0.992 10.000 1.000 NA   NA
 5830371 5830372 SPN23F_04910 SPN23F_04911 blpL pncM FALSE 0.074 178.000 0.000 NA   NA
 5830372 5830373 SPN23F_04911 SPN23F_04920 pncM   TRUE 0.721 32.000 0.000 NA   NA
 5830373 5830374 SPN23F_04920 SPN23F_04930   blpX TRUE 0.646 100.000 0.500 NA   NA
 5830374 5830375 SPN23F_04930 SPN23F_04940 blpX blpY TRUE 0.579 52.000 0.000 NA   NA
 5830375 5830376 SPN23F_04940 SPN23F_04941 blpY blpZ TRUE 0.662 42.000 0.000 NA   NA
 5830376 5830377 SPN23F_04941 SPN23F_04950 blpZ pncP FALSE 0.083 151.000 0.000 NA   NA
 5830377 5830378 SPN23F_04950 SPN23F_04960 pncP   FALSE 0.079 161.000 0.000 NA   NA
 5830378 5830379 SPN23F_04960 SPN23F_04970     TRUE 0.986 -3.000 0.154 NA   NA
 5830379 5830380 SPN23F_04970 SPN23F_04980     FALSE 0.145 126.000 0.004 NA   NA
 5830380 5830381 SPN23F_04980 SPN23F_04990   nusA TRUE 0.959 44.000 0.759 NA   NA
 5830381 5830382 SPN23F_04990 SPN23F_05000 nusA   TRUE 0.986 22.000 0.323 NA Y NA
 5830382 5830383 SPN23F_05000 SPN23F_05010     TRUE 0.991 -7.000 0.408 NA N NA
 5830383 5830384 SPN23F_05010 SPN23F_05020   infB TRUE 0.988 17.000 0.223 NA Y NA
 5830384 5830385 SPN23F_05020 SPN23F_05030 infB rbfA TRUE 0.649 251.000 0.530 1.000 Y NA
 5830385 5830386 SPN23F_05030 SPN23F_05040 rbfA   FALSE 0.064 279.000 0.000 NA   NA
 5830386 5830387 SPN23F_05040 SPN23F_05050     TRUE 0.926 2.000 0.000 NA   NA
 5830389 5830390 SPN23F_05070 SPN23F_05080     TRUE 0.988 0.000 0.229 NA   NA
 5830390 5830391 SPN23F_05080 SPN23F_05090     TRUE 0.967 10.000 0.114 NA   NA
 5830391 5830392 SPN23F_05090 SPN23F_05100     TRUE 0.477 96.000 0.143 NA   NA
 5830392 5830393 SPN23F_05100 SPN23F_05110     FALSE 0.071 413.000 0.000 1.000   NA
 5830393 5830394 SPN23F_05110 SPN23F_05120     TRUE 0.984 -13.000 0.150 1.000   NA
 5830394 5830395 SPN23F_05120 SPN23F_05130     TRUE 0.926 2.000 0.000 NA   NA
 5830395 5830396 SPN23F_05130 SPN23F_05140   valS TRUE 0.878 12.000 0.000 NA   NA
 5830396 5830397 SPN23F_05140 SPN23F_05150 valS   TRUE 0.361 70.000 0.000 NA   NA
 5830397 5830398 SPN23F_05150 SPN23F_05151     FALSE 0.064 281.000 0.000 NA   NA
 5830400 5830401 SPN23F_05190 SPN23F_05200     FALSE 0.069 300.000 0.000 1.000   NA
 5830401 5830402 SPN23F_05200 SPN23F_05210     TRUE 0.971 18.000 0.259 1.000   NA
 5830402 5830403 SPN23F_05210 SPN23F_05220     TRUE 0.993 13.000 0.318 1.000 Y NA
 5830403 5830404 SPN23F_05220 SPN23F_05230   pheS FALSE 0.059 511.000 0.000 1.000 N NA
 5830404 5830405 SPN23F_05230 SPN23F_05240 pheS   TRUE 0.962 0.000 0.009 1.000   NA
 5830405 5830406 SPN23F_05240 SPN23F_05250   pheT TRUE 0.422 77.000 0.007 1.000   NA
 5830408 5830409 SPN23F_05270 SPN23F_05280     FALSE 0.110 123.000 0.000 NA   NA
 5830409 5830410 SPN23F_05280 SPN23F_05290   metE FALSE 0.069 261.000 0.000 1.000   NA
 5830410 5830411 SPN23F_05290 SPN23F_05300 metE metF TRUE 0.911 64.000 0.050 0.002 Y NA
 5830411 5830412 SPN23F_05300 SPN23F_05310 metF pnpA FALSE 0.060 685.000 0.000 1.000 N NA
 5830412 5830413 SPN23F_05310 SPN23F_05320 pnpA cysE TRUE 0.888 16.000 0.006 1.000 N NA
 5830413 5830414 SPN23F_05320 SPN23F_05330 cysE   TRUE 0.938 12.000 0.017 1.000   NA
 5830414 5830415 SPN23F_05330 SPN23F_05340   cysS TRUE 0.279 87.000 0.002 1.000   NA
 5830415 5830416 SPN23F_05340 SPN23F_05350 cysS   TRUE 0.984 -7.000 0.129 1.000   NA
 5830416 5830417 SPN23F_05350 SPN23F_05360     TRUE 0.953 4.000 0.017 NA   NA
 5830419 5830420 SPN23F_05380 SPN23F_05390     FALSE 0.085 146.000 0.000 NA   NA
 5830420 5830421 SPN23F_05390 SPN23F_s07     FALSE 0.068 213.000 0.000 NA   NA
 5830421 5830422 SPN23F_s07 SPN23F_05400     TRUE 0.326 73.000 0.000 NA   NA
 5830422 5830423 SPN23F_05400 SPN23F_05410     TRUE 0.997 13.000 0.917 1.000 Y NA
 5830423 5830424 SPN23F_05410 SPN23F_05420     TRUE 0.974 52.000 0.542 1.000 Y NA
 5830424 5830425 SPN23F_05420 SPN23F_05430     TRUE 0.341 312.000 0.409 1.000 N NA
 5830425 5830426 SPN23F_05430 SPN23F_05440     TRUE 0.999 -3.000 1.000 1.000 Y NA
 5830426 5830427 SPN23F_05440 SPN23F_05450   fba FALSE 0.078 141.000 0.000 1.000 N NA
 5830428 5830429 SPN23F_05460 SPN23F_05470     FALSE 0.085 295.000 0.000 0.064 N NA
 5830429 5830430 SPN23F_05470 SPN23F_05480     TRUE 0.998 10.000 0.947 0.012 Y NA
 5830430 5830431 SPN23F_05480 SPN23F_05490     TRUE 0.995 13.000 0.400 0.048 Y NA
 5830431 5830432 SPN23F_05490 SPN23F_05500     TRUE 0.966 40.000 0.185 1.000 Y NA
 5830433 5830434 SPN23F_05510 SPN23F_05520     FALSE 0.080 175.000 0.000 1.000   NA
 5830434 5830435 SPN23F_05520 SPN23F_05530     TRUE 0.717 69.000 0.143 NA   NA
 5830435 5830436 SPN23F_05530 SPN23F_05540   murM TRUE 0.363 112.000 0.100 NA   NA
 5830436 5830437 SPN23F_05540 SPN23F_05550 murM murN TRUE 0.997 5.000 0.467 0.008 Y NA
 5830437 5830438 SPN23F_05550 SPN23F_05560 murN   TRUE 0.546 79.000 0.087 1.000 N NA
 5830438 5830439 SPN23F_05560 SPN23F_05570   uvrC TRUE 0.707 40.000 0.002 1.000 N NA
 5830439 5830440 SPN23F_05570 SPN23F_05580 uvrC   TRUE 0.608 50.000 0.000 NA   NA
 5830440 5830441 SPN23F_05580 SPN23F_05590     TRUE 0.931 1.000 0.000 NA   NA
 5830443 5830444 SPN23F_05610 SPN23F_05620   pepV TRUE 0.945 13.000 0.051 1.000 N NA
 5830444 5830445 SPN23F_05620 SPN23F_05630 pepV   TRUE 0.706 54.000 0.031 NA N NA
 5830445 5830446 SPN23F_05630 SPN23F_05640     FALSE 0.079 160.000 0.000 NA   NA
 5830446 5830447 SPN23F_05640 SPN23F_05641     TRUE 0.931 1.000 0.000 NA   NA
 5830447 5830448 SPN23F_05641 SPN23F_05650   brnQ FALSE 0.075 171.000 0.000 NA   NA
 5830448 5830449 SPN23F_05650 SPN23F_05660 brnQ   FALSE 0.149 98.000 0.000 1.000 N NA
 5830449 5830450 SPN23F_05660 SPN23F_05670     TRUE 0.985 2.000 0.007 1.000 Y NA
 5830450 5830451 SPN23F_05670 SPN23F_05680     TRUE 0.878 18.000 0.007 1.000 N NA
 5830451 5830452 SPN23F_05680 SPN23F_05690   rplK FALSE 0.096 123.000 0.000 1.000 N NA
 5830452 5830453 SPN23F_05690 SPN23F_05700 rplK rplA TRUE 0.798 208.000 0.838 0.033 Y NA
 5830453 5830454 SPN23F_05700 SPN23F_s08 rplA   FALSE 0.067 482.000 0.000 NA   NA
 5830456 5830457 SPN23F_05720 SPN23F_05730     FALSE 0.065 399.000 0.000 NA   NA
 5830457 5830458 SPN23F_05730 SPN23F_05740     FALSE 0.066 401.000 0.000 NA   NA
 5830458 5830459 SPN23F_05740 SPN23F_05750     TRUE 0.978 2.000 0.098 NA   NA
 5830459 5830460 SPN23F_05750 SPN23F_05760     TRUE 0.977 2.000 0.083 NA   NA
 5830460 5830461 SPN23F_05760 SPN23F_05770     FALSE 0.168 98.000 0.000 NA   NA
 5830461 5830462 SPN23F_05770 SPN23F_05780     TRUE 0.928 -15.000 0.000 NA   NA
 5830462 5830463 SPN23F_05780 SPN23F_05790     FALSE 0.069 724.000 0.000 NA   NA
 5830463 5830464 SPN23F_05790 SPN23F_05800     FALSE 0.073 632.000 0.000 1.000   NA
 5830464 5830465 SPN23F_05800 SPN23F_05810     TRUE 0.925 38.000 0.000 0.020 Y NA
 5830465 5830466 SPN23F_05810 SPN23F_05820     TRUE 0.899 48.000 0.000 0.032 Y NA
 5830466 5830467 SPN23F_05820 SPN23F_05830   bgaA TRUE 0.204 350.000 0.000 1.000 Y NA
 5830468 5830469 SPN23F_05840 SPN23F_05850     TRUE 0.935 0.000 0.000 NA   NA
 5830469 5830470 SPN23F_05850 SPN23F_05860     FALSE 0.068 211.000 0.000 NA   NA
 5830471 5830472 SPN23F_05870 SPN23F_05890     TRUE 0.927 -16.000 0.000 NA   NA
 5830472 5830473 SPN23F_05890 SPN23F_05900     TRUE 0.982 -7.000 0.100 NA   NA
 5830473 5830474 SPN23F_05900 SPN23F_05910     TRUE 0.968 12.000 0.136 NA   NA
 5830474 5830475 SPN23F_05910 SPN23F_05920     TRUE 0.179 179.000 0.044 1.000   NA
 5830475 5830476 SPN23F_05920 SPN23F_05930   ccdA FALSE 0.073 211.000 0.000 1.000   NA
 5830476 5830477 SPN23F_05930 SPN23F_05940 ccdA   TRUE 0.986 20.000 0.250 1.000 Y NA
 5830477 5830478 SPN23F_05940 SPN23F_05950   msrAB TRUE 0.997 11.000 0.875 1.000 Y NA
 5830478 5830479 SPN23F_05950 SPN23F_05960 msrAB   TRUE 0.301 358.000 0.240 1.000   NA
 5830479 5830480 SPN23F_05960 SPN23F_05970     TRUE 0.995 -3.000 0.480 0.013   NA
 5830480 5830481 SPN23F_05970 SPN23F_05980     TRUE 0.225 116.000 0.020 NA   NA
 5830481 5830482 SPN23F_05980 SPN23F_05990   zmpB TRUE 0.792 22.000 0.000 NA   NA
 5830482 5830483 SPN23F_05990 SPN23F_06000 zmpB pabB TRUE 0.481 61.000 0.000 1.000   NA
 5830483 5830484 SPN23F_06000 SPN23F_06010 pabB   FALSE 0.113 120.000 0.000 NA   NA
 5830484 5830485 SPN23F_06010 SPN23F_06030     TRUE 0.215 87.000 0.000 NA   NA
 5830485 5830486 SPN23F_06030 SPN23F_06040   glkA FALSE 0.127 191.000 0.015 NA   NA
 5830486 5830487 SPN23F_06040 SPN23F_06050 glkA thyA TRUE 0.221 97.000 0.006 1.000 N NA
 5830489 5830490 SPN23F_06070 SPN23F_06080 miaA   TRUE 0.972 -7.000 0.027 1.000   NA
 5830490 5830491 SPN23F_06080 SPN23F_06090     TRUE 0.965 -7.000 0.014 NA   NA
 5830491 5830492 SPN23F_06090 SPN23F_06100   rnz TRUE 0.929 15.000 0.022 NA   NA
 5830492 5830493 SPN23F_06100 SPN23F_06110 rnz   TRUE 0.933 21.000 0.074 1.000   NA
 5830495 5830496 SPN23F_06130 SPN23F_06140     TRUE 0.972 0.000 0.035 NA   NA
 5830498 5830499 SPN23F_06160 SPN23F_06170     TRUE 0.890 20.000 0.015 NA   NA
 5830499 5830500 SPN23F_06170 SPN23F_06180     FALSE 0.067 548.000 0.000 NA   NA
 5830500 5830501 SPN23F_06180 SPN23F_06190     TRUE 0.254 83.000 0.000 NA   NA
 5830501 5830502 SPN23F_06190 SPN23F_06200     FALSE 0.067 223.000 0.000 NA   NA
 5830502 5830503 SPN23F_06200 SPN23F_06210     TRUE 0.995 2.000 1.000 NA   NA
 5830503 5830504 SPN23F_06210 SPN23F_06220   murD FALSE 0.132 104.000 0.000 1.000 N NA
 5830504 5830505 SPN23F_06220 SPN23F_06230 murD murG TRUE 0.989 4.000 0.060 1.000 Y NA
 5830505 5830506 SPN23F_06230 SPN23F_06240 murG divIB TRUE 0.985 10.000 0.072 NA Y NA
 5830506 5830507 SPN23F_06240 SPN23F_06250 divIB pyrF FALSE 0.053 233.000 0.000 NA N NA
 5830507 5830508 SPN23F_06250 SPN23F_06260 pyrF pyrE TRUE 0.927 34.000 0.006 1.000 Y NA
 5830508 5830509 SPN23F_06260 SPN23F_06270 pyrE   FALSE 0.066 233.000 0.000 NA   NA
 5830509 5830510 SPN23F_06270 SPN23F_06280     TRUE 0.718 96.000 0.667 NA   NA
 5830510 5830511 SPN23F_06280 SPN23F_06290     TRUE 0.994 0.000 0.667 NA   NA
 5830511 5830512 SPN23F_06290 SPN23F_06300     TRUE 0.994 4.000 1.000 NA   NA
 5830512 5830513 SPN23F_06300 SPN23F_06310   ccmA TRUE 0.996 -3.000 1.000 NA   NA
 5830514 5830515 SPN23F_06320 SPN23F_06340     TRUE 0.878 12.000 0.000 NA   NA
 5830515 5830516 SPN23F_06340 SPN23F_06350     TRUE 0.998 1.000 0.773 1.000 Y NA
 5830516 5830517 SPN23F_06350 SPN23F_06360     TRUE 0.998 -40.000 0.841 0.012 Y NA
 5830518 5830519 SPN23F_06370 SPN23F_06380   lysS FALSE 0.109 128.000 0.000 1.000   NA
 5830519 5830520 SPN23F_06380 SPN23F_06390 lysS lctO FALSE 0.060 626.000 0.000 1.000 N NA
 5830520 5830521 SPN23F_06390 SPN23F_s09 lctO   FALSE 0.064 254.000 0.000 NA   NA
 5830521 5830522 SPN23F_s09 SPN23F_06400     FALSE 0.068 215.000 0.000 NA   NA
 5830522 5830523 SPN23F_06400 SPN23F_06420   thiM FALSE 0.052 326.000 0.000 NA N NA
 5830523 5830524 SPN23F_06420 SPN23F_06430 thiM thiE TRUE 0.994 2.000 0.061 0.005 Y NA
 5830524 5830525 SPN23F_06430 SPN23F_s10 thiE   FALSE 0.069 209.000 0.000 NA   NA
 5830525 5830526 SPN23F_s10 SPN23F_06440     FALSE 0.064 262.000 0.000 NA   NA
 5830526 5830527 SPN23F_06440 SPN23F_06450     TRUE 0.973 1.000 0.047 NA   NA
 5830527 5830528 SPN23F_06450 SPN23F_06460     TRUE 0.968 2.000 0.035 NA   NA
 5830528 5830529 SPN23F_06460 SPN23F_06470     TRUE 0.952 11.000 0.050 NA   NA
 5830529 5830530 SPN23F_06470 SPN23F_06480     TRUE 0.964 5.000 0.052 NA   NA
 5830530 5830531 SPN23F_06480 SPN23F_06490     TRUE 0.977 0.000 0.059 NA   NA
 5830531 5830532 SPN23F_06490 SPN23F_06500   thiE TRUE 0.997 -7.000 0.190 0.005 Y NA
 5830533 5830534 SPN23F_06510 SPN23F_s11 thiD   TRUE 0.240 84.000 0.000 NA   NA
 5830535 5830536 SPN23F_06520 SPN23F_06530     TRUE 0.978 11.000 0.250 NA   NA
 5830536 5830537 SPN23F_06530 SPN23F_06540     TRUE 0.973 10.000 0.167 NA   NA
 5830537 5830538 SPN23F_06540 SPN23F_06550   spxB FALSE 0.060 207.000 0.000 1.000 N NA
 5830538 5830539 SPN23F_06550 SPN23F_06560 spxB   TRUE 0.351 111.000 0.083 NA   NA
 5830540 5830541 SPN23F_06570 SPN23F_06580     TRUE 0.705 35.000 0.000 NA   NA
 5830542 5830543 SPN23F_06590 SPN23F_06600   pmi FALSE 0.163 132.000 0.000 0.025   NA
 5830546 5830547 SPN23F_06640 SPN23F_06650     TRUE 0.509 59.000 0.000 1.000   NA
 5830547 5830548 SPN23F_06650 SPN23F_06660     TRUE 0.633 59.000 0.012 NA   NA
 5830549 5830550 SPN23F_06670 SPN23F_06680     TRUE 0.801 19.000 0.000 1.000 N NA
 5830550 5830551 SPN23F_06680 SPN23F_06690   upp TRUE 0.826 68.000 0.041 1.000 Y NA
 5830551 5830552 SPN23F_06690 SPN23F_06700 upp clpP FALSE 0.108 174.000 0.010 1.000 N NA
 5830552 5830553 SPN23F_06700 SPN23F_06710 clpP   TRUE 0.544 79.000 0.065 NA   NA
 5830553 5830554 SPN23F_06710 SPN23F_06720     TRUE 0.409 102.000 0.109 NA   NA
 5830554 5830555 SPN23F_06720 SPN23F_06730     TRUE 0.462 268.000 0.150 1.000 Y NA
 5830555 5830556 SPN23F_06730 SPN23F_06740     TRUE 0.996 4.000 0.363 0.046 Y NA
 5830556 5830557 SPN23F_06740 SPN23F_06750     TRUE 0.997 0.000 0.349 1.000 Y NA
 5830557 5830558 SPN23F_06750 SPN23F_06760     TRUE 0.996 0.000 0.128 0.037 Y NA
 5830558 5830559 SPN23F_06760 SPN23F_06770     TRUE 0.281 308.000 0.214 1.000   NA
 5830559 5830560 SPN23F_06770 SPN23F_06780   prfB FALSE 0.071 226.000 0.000 1.000   NA
 5830560 5830561 SPN23F_06780 SPN23F_06790 prfB ftsE TRUE 0.927 18.000 0.053 1.000 N NA
 5830561 5830562 SPN23F_06790 SPN23F_06800 ftsE ftsX TRUE 0.997 -7.000 0.431 1.000 Y NA
 5830562 5830563 SPN23F_06800 SPN23F_06810 ftsX   FALSE 0.083 286.000 0.000 0.085 N NA
 5830563 5830564 SPN23F_06810 SPN23F_06820     TRUE 0.939 52.000 0.610 NA   NA
 5830564 5830565 SPN23F_06820 SPN23F_06830     FALSE 0.089 140.000 0.000 NA   NA
 5830565 5830566 SPN23F_06830 SPN23F_06840   metK FALSE 0.059 215.000 0.000 1.000 N NA
 5830566 5830567 SPN23F_06840 SPN23F_06860 metK pyrD FALSE 0.059 553.000 0.000 1.000 N NA
 5830567 5830568 SPN23F_06860 SPN23F_06870 pyrD   TRUE 0.743 34.000 0.002 1.000 N NA
 5830568 5830569 SPN23F_06870 SPN23F_06880   sodA FALSE 0.134 141.000 0.012 1.000 N NA
 5830569 5830570 SPN23F_06880 SPN23F_06890 sodA   FALSE 0.153 158.000 0.021 NA   NA
 5830570 5830571 SPN23F_06890 SPN23F_06900     TRUE 0.887 21.000 0.016 NA   NA
 5830571 5830572 SPN23F_06900 SPN23F_06910     TRUE 0.962 0.000 0.012 NA   NA
 5830572 5830573 SPN23F_06910 SPN23F_06920     TRUE 0.965 2.000 0.027 NA   NA
 5830574 5830575 SPN23F_06930 SPN23F_06940     FALSE 0.067 167.000 0.000 1.000 N NA
 5830575 5830576 SPN23F_06940 SPN23F_06950     TRUE 0.240 84.000 0.000 NA   NA
 5830577 5830578 SPN23F_06960 SPN23F_06970 rpsP   TRUE 0.973 20.000 0.385 1.000   NA
 5830578 5830579 SPN23F_06970 SPN23F_06980     FALSE 0.067 576.000 0.000 NA   NA
 5830579 5830580 SPN23F_06980 SPN23F_06990   rimM TRUE 0.434 70.000 0.002 NA   NA
 5830580 5830581 SPN23F_06990 SPN23F_07000 rimM trmD TRUE 0.998 -10.000 0.672 1.000 Y NA
 5830581 5830582 SPN23F_07000 SPN23F_07010 trmD   TRUE 0.911 12.000 0.002 1.000   NA
 5830585 5830586 SPN23F_07040 SPN23F_07050     TRUE 0.448 62.000 0.000 NA   NA
 5830587 5830588 SPN23F_07060 SPN23F_07070     TRUE 0.885 66.000 0.600 NA   NA
 5830588 5830589 SPN23F_07070 SPN23F_07080     TRUE 0.992 -3.000 0.400 NA   NA
 5830589 5830590 SPN23F_07080 SPN23F_07090     TRUE 0.992 -3.000 0.400 NA   NA
 5830592 5830593 SPN23F_07110 SPN23F_07120     TRUE 0.995 -16.000 0.923 1.000 N NA
 5830593 5830594 SPN23F_07120 SPN23F_07130     TRUE 0.998 2.000 0.923 1.000 Y NA
 5830594 5830595 SPN23F_07130 SPN23F_07140   metG FALSE 0.132 124.000 0.003 1.000 N NA
 5830595 5830596 SPN23F_07140 SPN23F_07160 metG   FALSE 0.052 331.000 0.000 NA N NA
 5830596 5830597 SPN23F_07160 SPN23F_07170     TRUE 0.989 4.000 0.429 NA   NA
 5830597 5830598 SPN23F_07170 SPN23F_07180     TRUE 0.313 75.000 0.000 NA   NA
 5830598 5830599 SPN23F_07180 SPN23F_07190     TRUE 0.261 96.000 0.008 NA   NA
 5830599 5830600 SPN23F_07190 SPN23F_07200     TRUE 0.994 -7.000 0.710 NA   NA
 5830600 5830601 SPN23F_07200 SPN23F_07210     TRUE 0.953 11.000 0.067 1.000 N NA
 5830601 5830602 SPN23F_07210 SPN23F_07220     TRUE 0.964 8.000 0.091 1.000 N NA
 5830602 5830603 SPN23F_07220 SPN23F_07230     TRUE 0.679 42.000 0.000 1.000   NA
 5830603 5830604 SPN23F_07230 SPN23F_07240     TRUE 0.922 -25.000 0.000 NA   NA
 5830604 5830605 SPN23F_07240 SPN23F_07250   pepN FALSE 0.110 123.000 0.000 NA   NA
 5830607 5830608 SPN23F_07270 SPN23F_07280 ciaR ciaH TRUE 0.998 -10.000 0.606 1.000 Y NA
 5830610 5830611 SPN23F_07300 SPN23F_07310     FALSE 0.061 200.000 0.000 1.000 N NA
 5830611 5830612 SPN23F_07310 SPN23F_07320     TRUE 0.803 37.000 0.019 1.000 N NA
 5830612 5830613 SPN23F_07320 SPN23F_07330     TRUE 0.923 11.000 0.008 NA   NA
 5830613 5830614 SPN23F_07330 SPN23F_07340     TRUE 0.228 85.000 0.000 NA   NA
 5830614 5830615 SPN23F_07340 SPN23F_07350   gyrB TRUE 0.923 15.000 0.013 1.000   NA
 5830615 5830616 SPN23F_07350 SPN23F_07360 gyrB ezrA TRUE 0.355 82.000 0.011 1.000 N NA
 5830617 5830618 SPN23F_07370 SPN23F_07380     FALSE 0.064 261.000 0.000 NA   NA
 5830618 5830619 SPN23F_07380 SPN23F_07390     TRUE 0.244 165.000 0.114 NA   NA
 5830621 5830622 SPN23F_07420 SPN23F_07430 clpE   FALSE 0.066 229.000 0.000 NA   NA
 5830623 5830624 SPN23F_07440 SPN23F_07450   glnQ3 TRUE 0.998 0.000 0.640 1.000 Y NA
 5830624 5830625 SPN23F_07450 SPN23F_07460 glnQ3 folD FALSE 0.156 133.000 0.017 1.000 N NA
 5830625 5830626 SPN23F_07460 SPN23F_07470 folD   FALSE 0.145 137.000 0.009 NA   NA
 5830626 5830627 SPN23F_07470 SPN23F_07480     TRUE 0.923 14.000 0.013 NA   NA
 5830627 5830628 SPN23F_07480 SPN23F_07490   rpiA TRUE 0.193 298.000 0.000 NA Y NA
 5830628 5830629 SPN23F_07490 SPN23F_07500 rpiA deoB TRUE 0.976 14.000 0.018 1.000 Y NA
 5830629 5830630 SPN23F_07500 SPN23F_07510 deoB   TRUE 0.976 2.000 0.080 NA   NA
 5830630 5830631 SPN23F_07510 SPN23F_07520   punA TRUE 0.951 16.000 0.083 NA   NA
 5830631 5830632 SPN23F_07520 SPN23F_07530 punA   FALSE 0.064 306.000 0.000 NA   NA
 5830632 5830633 SPN23F_07530 SPN23F_07570   deoD FALSE 0.068 654.000 0.000 NA   NA
 5830634 5830635 SPN23F_07580 SPN23F_07590   rpsT TRUE 0.604 53.000 0.002 1.000 N NA
 5830635 5830636 SPN23F_07590 SPN23F_07600 rpsT coaA TRUE 0.510 68.000 0.014 1.000 N NA
 5830637 5830638 SPN23F_07610 SPN23F_07620     FALSE 0.067 219.000 0.000 NA   NA
 5830638 5830639 SPN23F_07620 SPN23F_07630   deoA TRUE 0.973 -3.000 0.044 1.000 N NA
 5830639 5830640 SPN23F_07630 SPN23F_07640 deoA deoC TRUE 0.982 18.000 0.106 1.000 Y NA
 5830640 5830641 SPN23F_07640 SPN23F_07650 deoC cdd TRUE 0.991 -13.000 0.051 1.000 Y NA
 5830641 5830642 SPN23F_07650 SPN23F_07660 cdd   TRUE 0.573 91.000 0.200 1.000   NA
 5830642 5830643 SPN23F_07660 SPN23F_07670     FALSE 0.178 144.000 0.024 1.000   NA
 5830643 5830644 SPN23F_07670 SPN23F_07680     TRUE 0.993 -7.000 0.438 1.000   NA
 5830644 5830645 SPN23F_07680 SPN23F_07690     TRUE 0.995 3.000 0.720 0.045   NA
 5830645 5830646 SPN23F_07690 SPN23F_07700     TRUE 0.228 85.000 0.000 NA   NA
 5830646 5830647 SPN23F_07700 SPN23F_07720     TRUE 0.935 0.000 0.000 NA   NA
 5830649 5830650 SPN23F_07740 SPN23F_07760 parE parC TRUE 0.758 456.000 0.552 0.002 Y NA
 5830650 5830651 SPN23F_07760 SPN23F_07770 parC   TRUE 0.247 132.000 0.086 1.000 N NA
 5830651 5830652 SPN23F_07770 SPN23F_07780     TRUE 0.531 56.000 0.000 NA   NA
 5830652 5830653 SPN23F_07780 SPN23F_07790     TRUE 0.424 65.000 0.000 NA   NA
 5830653 5830654 SPN23F_07790 SPN23F_07800     TRUE 0.996 -3.000 0.939 NA   NA
 5830654 5830655 SPN23F_07800 SPN23F_07810   pcp TRUE 0.977 15.000 0.300 NA   NA
 5830655 5830656 SPN23F_07810 SPN23F_07820 pcp   FALSE 0.076 168.000 0.000 NA   NA
 5830656 5830657 SPN23F_07820 SPN23F_t04   tRNA-Tyr TRUE 0.608 50.000 0.000 NA   NA
 5830657 5830658 SPN23F_t04 SPN23F_t05 tRNA-Tyr tRNA-Gln TRUE 0.885 10.000 0.000 NA   NA
 5830658 5830659 SPN23F_t05 SPN23F_07830 tRNA-Gln   FALSE 0.078 162.000 0.000 NA   NA
 5830660 10784519 SPN23F_07840 SPN23F_07850     TRUE 0.919 -721.000 0.000 NA   NA
 5830661 5830662 SPN23F_07870 SPN23F_07880   dnaH TRUE 0.965 0.000 0.030 NA N NA
 5830662 5830663 SPN23F_07880 SPN23F_07900 dnaH sufC FALSE 0.057 372.000 0.000 1.000 N NA
 5830663 5830664 SPN23F_07900 SPN23F_07910 sufC sufD TRUE 0.972 28.000 0.139 1.000 Y NA
 5830664 5830665 SPN23F_07910 SPN23F_07920 sufD csdB TRUE 0.987 11.000 0.606 1.000 N NA
 5830665 5830666 SPN23F_07920 SPN23F_07930 csdB iscU TRUE 0.988 -13.000 0.292 1.000 N NA
 5830666 5830667 SPN23F_07930 SPN23F_07940 iscU sufB TRUE 0.895 54.000 0.152 0.002 N NA
 5830669 5830670 SPN23F_07960 SPN23F_s12     FALSE 0.068 646.000 0.000 NA   NA
 5830672 5830673 SPN23F_07970 SPN23F_07980   fruK TRUE 0.998 -3.000 0.721 1.000 Y NA
 5830673 5830674 SPN23F_07980 SPN23F_07990 fruK fruA TRUE 0.998 -3.000 0.816 1.000 Y NA
 5830674 5830675 SPN23F_07990 SPN23F_08010 fruA   FALSE 0.159 164.000 0.010 0.061 N NA
 5830677 5830678 SPN23F_08030 SPN23F_08040   thiI TRUE 0.983 9.000 0.349 1.000 N NA
 5830678 5830679 SPN23F_08040 SPN23F_08050 thiI   FALSE 0.133 135.000 0.005 NA   NA
 5830679 5830680 SPN23F_08050 SPN23F_08060     TRUE 0.875 13.000 0.000 NA   NA
 5830680 5830681 SPN23F_08060 SPN23F_08070     FALSE 0.058 508.000 0.000 1.000 N NA
 5830681 5830682 SPN23F_08070 SPN23F_08080     TRUE 0.919 13.000 0.000 0.065   NA
 5830682 5830683 SPN23F_08080 SPN23F_08090     TRUE 0.968 -3.000 0.000 0.005   NA
 5830683 5830684 SPN23F_08090 SPN23F_08100     TRUE 0.474 60.000 0.000 NA   NA
 5830684 5830685 SPN23F_08100 SPN23F_08110     TRUE 0.962 -3.000 0.009 NA   NA
 5830685 5830686 SPN23F_08110 SPN23F_08120     FALSE 0.126 118.000 0.000 1.000   NA
 5830686 5830687 SPN23F_08120 SPN23F_08130     TRUE 0.950 -34.000 0.000 0.065   NA
 5830687 5830688 SPN23F_08130 SPN23F_08140     TRUE 0.847 30.000 0.000 0.005   NA
 5830689 5830690 SPN23F_08150 SPN23F_08160 argR pepXP TRUE 0.853 17.000 0.000 1.000   NA
 5830691 5830692 SPN23F_08170 SPN23F_08180 dnaE pfk TRUE 0.526 83.000 0.098 1.000 N NA
 5830692 5830693 SPN23F_08180 SPN23F_08190 pfk pyk TRUE 0.962 59.000 0.261 0.005 Y NA
 5830697 5830698 SPN23F_08230 SPN23F_08240     TRUE 0.911 4.000 0.000 NA   NA
 5830699 5830700 SPN23F_08250 SPN23F_08260     TRUE 0.995 -3.000 0.841 NA   NA
 5830700 5830701 SPN23F_08260 SPN23F_08270     TRUE 0.979 1.000 0.091 NA   NA
 5830701 5830702 SPN23F_08270 SPN23F_08280     FALSE 0.130 114.000 0.000 NA   NA
 5830703 5830704 SPN23F_08290 SPN23F_08300     TRUE 0.986 -13.000 0.215 NA   NA
 5830704 5830705 SPN23F_08300 SPN23F_08310     TRUE 0.725 59.000 0.051 NA   NA
 5830706 5830707 SPN23F_08320 SPN23F_08321     FALSE 0.088 142.000 0.000 NA   NA
 5830708 5830709 SPN23F_08330 SPN23F_08340     TRUE 0.995 2.000 0.855 1.000   NA
 5830710 5830711 SPN23F_08350 SPN23F_08360     TRUE 0.924 -19.000 0.000 NA   NA
 5830714 5830715 SPN23F_08420 SPN23F_08430 speE   TRUE 0.991 -3.000 0.036 1.000 Y NA
 5830715 5830716 SPN23F_08430 SPN23F_08440     TRUE 0.997 0.000 0.444 1.000 Y NA
 5830716 5830717 SPN23F_08440 SPN23F_08450     TRUE 0.990 -3.000 0.025 1.000 Y NA
 5830717 5830718 SPN23F_08450 SPN23F_08460     TRUE 0.965 10.000 0.084 1.000   NA
 5830720 5830721 SPN23F_08480 SPN23F_08500     FALSE 0.065 242.000 0.000 NA   NA
 5830721 5830722 SPN23F_08500 SPN23F_08510   lspA TRUE 0.982 -3.000 0.119 1.000 N NA
 5830722 5830723 SPN23F_08510 SPN23F_08520 lspA   TRUE 0.977 -10.000 0.082 1.000 N NA
 5830723 5830724 SPN23F_08520 SPN23F_08530   cbpE TRUE 0.922 3.000 0.000 1.000   NA
 5830724 5830725 SPN23F_08530 SPN23F_08540 cbpE proB TRUE 0.221 101.000 0.003 1.000   NA
 5830725 5830726 SPN23F_08540 SPN23F_08550 proB proA TRUE 0.995 10.000 0.281 0.002 Y NA
 5830726 5830727 SPN23F_08550 SPN23F_08560 proA proC TRUE 0.989 4.000 0.009 0.002 Y NA
 5830727 5830728 SPN23F_08560 SPN23F_08570 proC tmk FALSE 0.058 220.000 0.000 1.000 N NA
 5830728 5830729 SPN23F_08570 SPN23F_08580 tmk holB TRUE 0.988 -3.000 0.254 1.000 N NA
 5830729 5830730 SPN23F_08580 SPN23F_08590 holB   TRUE 0.836 40.000 0.038 NA   NA
 5830730 5830731 SPN23F_08590 SPN23F_08600     TRUE 0.966 3.000 0.043 NA   NA
 5830731 5830732 SPN23F_08600 SPN23F_08610     FALSE 0.066 227.000 0.000 NA   NA
 5830732 5830733 SPN23F_08610 SPN23F_08620     FALSE 0.141 109.000 0.000 NA   NA
 5830735 5830736 SPN23F_08650 SPN23F_08660   pyrH TRUE 0.274 84.000 0.002 1.000 N NA
 5830736 5830737 SPN23F_08660 SPN23F_08670 pyrH rrf TRUE 0.989 9.000 0.626 1.000 N NA
 5830737 5830738 SPN23F_08670 SPN23F_08680 rrf   TRUE 0.878 21.000 0.012 NA   NA
 5830738 5830739 SPN23F_08680 SPN23F_08690     TRUE 0.938 9.000 0.013 NA   NA
 5830739 5830740 SPN23F_08690 SPN23F_08700     TRUE 0.325 86.000 0.010 NA   NA
 5830740 5830741 SPN23F_08700 SPN23F_08720     FALSE 0.071 193.000 0.000 NA   NA
 5830741 5830742 SPN23F_08720 SPN23F_08740     TRUE 0.917 3.000 0.000 NA   NA
 5830742 5830743 SPN23F_08740 SPN23F_08780     FALSE 0.071 1687.000 0.000 NA   NA
 5830743 5830744 SPN23F_08780 SPN23F_08790   comEA TRUE 0.695 68.000 0.125 1.000 N NA
 5830744 5830745 SPN23F_08790 SPN23F_08800 comEA comEC TRUE 0.948 -16.000 0.002 1.000   NA
 5830745 5830746 SPN23F_08800 SPN23F_08820 comEC   FALSE 0.070 399.000 0.000 1.000   NA
 5830746 5830747 SPN23F_08820 SPN23F_08830     TRUE 0.990 4.000 0.500 NA   NA
 5830747 5830748 SPN23F_08830 SPN23F_08840   infC FALSE 0.064 280.000 0.000 NA   NA
 5830748 5830749 SPN23F_08840 SPN23F_08850 infC rpmI TRUE 0.987 33.000 0.652 1.000 Y NA
 5830749 5830750 SPN23F_08850 SPN23F_08860 rpmI rplT TRUE 0.988 52.000 0.928 0.023 Y NA
 5830750 5830751 SPN23F_08860 SPN23F_08870 rplT gloA TRUE 0.564 58.000 0.003 1.000 N NA
 5830751 5830752 SPN23F_08870 SPN23F_08880 gloA pyrK FALSE 0.057 250.000 0.000 1.000 N NA
 5830752 5830753 SPN23F_08880 SPN23F_08890 pyrK pyrD TRUE 0.987 11.000 0.592 1.000 N NA
 5830753 5830754 SPN23F_08890 SPN23F_08900 pyrD lytB TRUE 0.239 99.000 0.005 1.000   NA
 5830756 5830757 SPN23F_08920 SPN23F_08930   dgk TRUE 0.967 -19.000 0.035 NA   NA
 5830757 5830758 SPN23F_08930 SPN23F_08940 dgk era TRUE 0.945 17.000 0.063 1.000   NA
 5830758 5830759 SPN23F_08940 SPN23F_08950 era fpg TRUE 0.717 49.000 0.004 1.000   NA
 5830759 5830760 SPN23F_08950 SPN23F_08960 fpg coaE TRUE 0.976 0.000 0.066 1.000 N NA
 5830760 5830761 SPN23F_08960 SPN23F_08970 coaE pmrA TRUE 0.950 -13.000 0.007 1.000 N NA
 5830761 5830762 SPN23F_08970 SPN23F_08980 pmrA secG FALSE 0.141 189.000 0.007 0.060 N NA
 5830762 5830763 SPN23F_08980 SPN23F_08990 secG rnr TRUE 0.334 102.000 0.064 1.000 N NA
 5830763 5830764 SPN23F_08990 SPN23F_09000 rnr smpB TRUE 0.985 -37.000 0.143 0.030 N NA
 5830764 5830765 SPN23F_09000 SPN23F_09010 smpB   TRUE 0.871 16.000 0.002 1.000 N NA
 5830765 5830766 SPN23F_09010 SPN23F_09020     TRUE 0.326 73.000 0.000 NA   NA
 5830766 5830767 SPN23F_09020 SPN23F_09030   pepB TRUE 0.960 19.000 0.204 NA   NA
 5830767 5830768 SPN23F_09030 SPN23F_09040 pepB   TRUE 0.832 38.000 0.024 1.000   NA
 5830768 5830769 SPN23F_09040 SPN23F_09050   prsA TRUE 0.576 67.000 0.016 1.000   NA
 5830770 5830771 SPN23F_09060 SPN23F_09070     TRUE 0.917 3.000 0.000 NA   NA
 5830773 5830774 SPN23F_09090 SPN23F_09100     TRUE 0.966 0.000 0.018 NA   NA
 5830774 5830775 SPN23F_09100 SPN23F_09110     TRUE 0.962 0.000 0.012 NA   NA
 5830775 5830776 SPN23F_09110 SPN23F_09120     TRUE 0.402 95.000 0.062 NA   NA
 5830777 5830778 SPN23F_09130 SPN23F_09140 gcaD   TRUE 0.929 10.000 0.015 1.000 N NA
 5830778 5830779 SPN23F_09140 SPN23F_09150     TRUE 0.940 12.000 0.025 NA   NA
 5830779 5830780 SPN23F_09150 SPN23F_09160   mtnN TRUE 0.931 17.000 0.041 NA   NA
 5830780 5830781 SPN23F_09160 SPN23F_09170 mtnN   TRUE 0.208 89.000 0.000 NA   NA
 5830781 5830782 SPN23F_09170 SPN23F_09180     TRUE 0.369 98.000 0.057 NA   NA
 5830782 5830783 SPN23F_09180 SPN23F_09190     TRUE 0.965 9.000 0.105 1.000 N NA
 5830783 5830784 SPN23F_09190 SPN23F_09200     FALSE 0.071 196.000 0.000 NA   NA
 5830784 5830785 SPN23F_09200 SPN23F_09220     FALSE 0.077 167.000 0.000 NA   NA
 5830785 5830786 SPN23F_09220 SPN23F_09240     FALSE 0.085 147.000 0.000 NA   NA
 5830786 5830787 SPN23F_09240 SPN23F_09250     FALSE 0.066 231.000 0.000 NA   NA
 5830787 5830788 SPN23F_09250 SPN23F_09260     TRUE 0.995 11.000 0.500 1.000 Y NA
 5830788 5830789 SPN23F_09260 SPN23F_09270     FALSE 0.057 374.000 0.000 1.000 N NA
 5830789 5830790 SPN23F_09270 SPN23F_09280   lmb FALSE 0.077 143.000 0.000 1.000 N NA
 5830790 5830791 SPN23F_09280 SPN23F_09290 lmb phtD TRUE 0.988 8.000 0.500 NA   NA
 5830791 5830792 SPN23F_09290 SPN23F_09300 phtD phtE FALSE 0.068 210.000 0.000 NA   NA
 5830792 5830793 SPN23F_09300 SPN23F_09301 phtE phtE FALSE 0.066 226.000 0.000 NA   NA
 5830793 5830794 SPN23F_09301 SPN23F_09310 phtE   TRUE 0.905 5.000 0.000 NA   NA
 5830794 5830795 SPN23F_09310 SPN23F_09320     FALSE 0.064 295.000 0.000 NA   NA
 5830798 5830799 SPN23F_09350 SPN23F_09360 mscL   TRUE 0.443 82.000 0.003 0.061   NA
 5830800 5830801 SPN23F_09370 SPN23F_t07   tRNA-Thr FALSE 0.161 100.000 0.000 NA   NA
 5830801 5830802 SPN23F_t07 SPN23F_09380 tRNA-Thr asd FALSE 0.068 631.000 0.000 NA   NA
 5830802 5830803 SPN23F_09380 SPN23F_09390 asd dapA TRUE 0.910 56.000 0.063 1.000 Y NA
 5830804 5830805 SPN23F_09400 SPN23F_09410 trmE   FALSE 0.132 136.000 0.003 1.000   NA
 5830806 5830807 SPN23F_09420 SPN23F_09430 tdk prfA TRUE 0.976 -3.000 0.062 1.000 N NA
 5830807 5830808 SPN23F_09430 SPN23F_09440 prfA   TRUE 0.993 0.000 0.084 1.000 Y NA
 5830808 5830809 SPN23F_09440 SPN23F_09450     TRUE 0.988 -16.000 0.029 NA Y NA
 5830809 5830810 SPN23F_09450 SPN23F_09460     TRUE 0.958 2.000 0.012 NA   NA
 5830810 5830811 SPN23F_09460 SPN23F_09470   glyA TRUE 0.712 62.000 0.056 1.000   NA
 5830811 5830812 SPN23F_09470 SPN23F_09480 glyA   TRUE 0.970 8.000 0.103 NA   NA
 5830812 5830813 SPN23F_09480 SPN23F_09490     TRUE 0.983 0.000 0.128 NA   NA
 5830813 5830814 SPN23F_09490 SPN23F_09500     TRUE 0.487 74.000 0.019 NA   NA
 5830814 5830815 SPN23F_09500 SPN23F_09510     TRUE 0.486 74.000 0.019 NA   NA
 5830815 5830816 SPN23F_09510 SPN23F_09511     FALSE 0.070 199.000 0.000 NA   NA
 5830816 5830817 SPN23F_09511 SPN23F_09520     FALSE 0.065 246.000 0.000 NA   NA
 5830817 5830818 SPN23F_09520 SPN23F_09530     FALSE 0.057 393.000 0.000 1.000 N NA
 5830818 5830819 SPN23F_09530 SPN23F_09540     TRUE 0.998 -10.000 0.778 1.000 Y NA
 5830819 5830820 SPN23F_09540 SPN23F_09550     TRUE 0.999 0.000 0.800 0.044 Y NA
 5830820 5830821 SPN23F_09550 SPN23F_09560     TRUE 0.996 0.000 0.250 1.000 Y NA
 5830821 5830822 SPN23F_09560 SPN23F_09561     FALSE 0.077 165.000 0.000 NA   NA
 5830822 5830823 SPN23F_09561 SPN23F_09562     FALSE 0.085 146.000 0.000 NA   NA
 5830823 5830824 SPN23F_09562 SPN23F_09570     FALSE 0.105 125.000 0.000 NA   NA
 5830824 5830825 SPN23F_09570 SPN23F_09571     FALSE 0.073 179.000 0.000 NA   NA
 5830825 5830826 SPN23F_09571 SPN23F_09580     FALSE 0.065 362.000 0.000 NA   NA
 5830826 5830827 SPN23F_09580 SPN23F_09590     FALSE 0.072 185.000 0.000 NA   NA
 5830827 5830828 SPN23F_09590 SPN23F_09610     FALSE 0.064 268.000 0.000 NA   NA
 5830828 5830829 SPN23F_09610 SPN23F_09620     FALSE 0.064 322.000 0.000 NA   NA
 5830829 5830830 SPN23F_09620 SPN23F_09630     TRUE 0.764 62.000 0.125 NA   NA
 5830830 5830831 SPN23F_09630 SPN23F_09640     TRUE 0.935 0.000 0.000 NA   NA
 5830831 5830832 SPN23F_09640 SPN23F_09650     TRUE 0.302 112.000 0.077 NA N NA
 5830832 5830833 SPN23F_09650 SPN23F_09660     FALSE 0.069 163.000 0.000 1.000 N NA
 5830833 5830834 SPN23F_09660 SPN23F_09670     TRUE 0.356 86.000 0.016 NA   NA
 5830834 5830835 SPN23F_09670 SPN23F_09700     FALSE 0.069 772.000 0.000 NA   NA
 5830835 5830836 SPN23F_09700 SPN23F_09710     TRUE 0.939 0.000 0.000 1.000   NA
 5830836 5830837 SPN23F_09710 SPN23F_09720     TRUE 0.744 28.000 0.000 NA   NA
 5830837 5830838 SPN23F_09720 SPN23F_09731     FALSE 0.067 478.000 0.000 NA   NA
 5830838 5830839 SPN23F_09731 SPN23F_09740     FALSE 0.079 160.000 0.000 NA   NA
 5830839 5830840 SPN23F_09740 SPN23F_09750     TRUE 0.885 10.000 0.000 NA   NA
 5830840 5830841 SPN23F_09750 SPN23F_09780     TRUE 0.780 23.000 0.000 NA   NA
 5830843 5830844 SPN23F_09800 SPN23F_09810     TRUE 0.936 -7.000 0.000 NA   NA
 5830844 5830845 SPN23F_09810 SPN23F_09820     TRUE 0.875 13.000 0.000 NA   NA
 5830845 5830846 SPN23F_09820 SPN23F_09830     TRUE 0.711 34.000 0.000 NA   NA
 5830846 5830847 SPN23F_09830 SPN23F_09840     TRUE 0.936 -7.000 0.000 NA   NA
 5830847 5830848 SPN23F_09840 SPN23F_09850     TRUE 0.875 13.000 0.000 NA   NA
 5830848 5830849 SPN23F_09850 SPN23F_09860     FALSE 0.067 542.000 0.000 NA   NA
 5830849 5830850 SPN23F_09860 SPN23F_09871     FALSE 0.067 549.000 0.000 NA   NA
 5830850 5830851 SPN23F_09871 SPN23F_09880   ftsW FALSE 0.087 143.000 0.000 NA   NA
 5830851 5830852 SPN23F_09880 SPN23F_09890 ftsW ppc TRUE 0.896 20.000 0.028 1.000 N NA
 5830852 5830853 SPN23F_09890 SPN23F_s13 ppc   FALSE 0.161 100.000 0.000 NA   NA
 5830853 5830854 SPN23F_s13 SPN23F_09900     TRUE 0.240 84.000 0.000 NA   NA
 5830854 5830855 SPN23F_09900 SPN23F_09910     TRUE 0.822 69.000 0.368 NA   NA
 5830855 5830856 SPN23F_09910 SPN23F_09920     TRUE 0.996 -3.000 0.895 1.000   NA
 5830856 5830857 SPN23F_09920 SPN23F_09930   dnaG TRUE 0.272 90.000 0.002 1.000   NA
 5830857 5830858 SPN23F_09930 SPN23F_09940 dnaG rpoD TRUE 0.982 3.000 0.209 1.000 N NA
 5830858 5830859 SPN23F_09940 SPN23F_09950 rpoD   TRUE 0.944 14.000 0.044 NA   NA
 5830859 5830860 SPN23F_09950 SPN23F_09960     TRUE 0.228 115.000 0.019 NA   NA
 5830860 5830861 SPN23F_09960 SPN23F_09970     TRUE 0.995 16.000 0.413 0.012 Y NA
 5830861 5830862 SPN23F_09970 SPN23F_09980     TRUE 0.812 31.000 0.016 NA N NA
 5830862 5830863 SPN23F_09980 SPN23F_09990     TRUE 0.819 59.000 0.167 NA   NA
 5830863 5830864 SPN23F_09990 SPN23F_10000     TRUE 0.496 70.000 0.011 NA   NA
 5830864 5830865 SPN23F_10000 SPN23F_10010     TRUE 0.928 10.000 0.009 NA   NA
 5830865 5830866 SPN23F_10010 SPN23F_10020   murZ FALSE 0.070 1087.000 0.000 NA   NA
 5830866 5830867 SPN23F_10020 SPN23F_10030 murZ   TRUE 0.935 16.000 0.052 1.000 N NA
 5830867 5830868 SPN23F_10030 SPN23F_10040     TRUE 0.990 -7.000 0.342 1.000 N NA
 5830868 5830869 SPN23F_10040 SPN23F_10050     TRUE 0.968 16.000 0.235 1.000 N NA
 5830869 5830870 SPN23F_10050 SPN23F_10060     FALSE 0.066 225.000 0.000 NA   NA
 5830870 5830871 SPN23F_10060 SPN23F_10080   pcrA FALSE 0.072 191.000 0.000 NA   NA
 5830871 5830872 SPN23F_10080 SPN23F_10090 pcrA radC TRUE 0.934 43.000 0.005 0.016 Y NA
 5830873 5830874 SPN23F_10100 SPN23F_10110   rex TRUE 0.985 18.000 0.714 1.000   NA
 5830874 5830875 SPN23F_10110 SPN23F_10120 rex   TRUE 0.592 83.000 0.143 NA   NA
 5830875 5830876 SPN23F_10120 SPN23F_10130     TRUE 0.961 8.000 0.056 NA   NA
 5830876 5830877 SPN23F_10130 SPN23F_10140     TRUE 0.978 5.000 0.166 NA   NA
 5830877 5830878 SPN23F_10140 SPN23F_10150   prsA2 TRUE 0.987 10.000 0.089 1.000 Y NA
 5830878 5830879 SPN23F_10150 SPN23F_10160 prsA2   TRUE 0.409 113.000 0.145 1.000   NA
 5830880 5830881 SPN23F_10170 SPN23F_10180   ppnK TRUE 0.994 -16.000 0.725 1.000   NA
 5830881 5830882 SPN23F_10180 SPN23F_10190 ppnK   TRUE 0.984 -3.000 0.150 1.000 N NA
 5830882 5830883 SPN23F_10190 SPN23F_10200   pta TRUE 0.832 44.000 0.067 1.000 N NA
 5830884 5830885 SPN23F_10210 SPN23F_10240     FALSE 0.073 182.000 0.000 NA   NA
 5830886 5830887 SPN23F_10250 SPN23F_10260   rplU FALSE 0.073 182.000 0.000 NA   NA
 5830887 5830888 SPN23F_10260 SPN23F_10270 rplU   TRUE 0.988 16.000 0.208 NA Y NA
 5830888 5830889 SPN23F_10270 SPN23F_10280   rpmA TRUE 0.987 17.000 0.203 NA Y NA
 5830889 5830890 SPN23F_10280 SPN23F_10310 rpmA ribC FALSE 0.061 953.000 0.000 1.000 N NA
 5830892 5830893 SPN23F_10330 SPN23F_10340   hlpA TRUE 0.376 107.000 0.098 NA   NA
 5830893 5830894 SPN23F_10340 SPN23F_10350 hlpA   FALSE 0.071 430.000 0.000 1.000   NA
 5830894 5830895 SPN23F_10350 SPN23F_10360     TRUE 0.960 3.000 0.019 1.000   NA
 5830895 5830896 SPN23F_10360 SPN23F_10370     TRUE 0.806 80.000 0.600 NA   NA
 5830896 5830897 SPN23F_10370 SPN23F_10380   lig TRUE 0.240 93.000 0.002 NA   NA
 5830897 5830898 SPN23F_10380 SPN23F_10390 lig   FALSE 0.157 112.000 0.002 1.000 N NA
 5830898 5830899 SPN23F_10390 SPN23F_10400   gapN FALSE 0.059 545.000 0.000 1.000 N NA
 5830899 5830900 SPN23F_10400 SPN23F_10410 gapN glgB FALSE 0.058 483.000 0.000 1.000 N NA
 5830900 5830901 SPN23F_10410 SPN23F_10420 glgB glgC TRUE 0.998 -10.000 0.317 0.002 Y NA
 5830901 5830902 SPN23F_10420 SPN23F_10430 glgC   TRUE 0.999 -10.000 0.810 0.001 Y NA
 5830902 5830903 SPN23F_10430 SPN23F_10440   glgA TRUE 0.997 -3.000 0.395 1.000 Y NA
 5830903 5830904 SPN23F_10440 SPN23F_10460 glgA   TRUE 0.490 59.000 0.000 NA   NA
 5830904 5830905 SPN23F_10460 SPN23F_10470     TRUE 0.892 9.000 0.000 NA   NA
 5830908 5830909 SPN23F_10500 SPN23F_10510     TRUE 0.905 5.000 0.000 NA   NA
 5830910 5830911 SPN23F_10540 SPN23F_10550 addB addA TRUE 0.995 -3.000 0.070 0.061 Y NA
 5830911 5830912 SPN23F_10550 SPN23F_10570 addA   FALSE 0.110 215.000 0.010 NA   NA
 5830912 5830913 SPN23F_10570 SPN23F_10580   zmpA FALSE 0.069 209.000 0.000 NA   NA
 5830913 5830914 SPN23F_10580 SPN23F_10590 zmpA zmpD TRUE 0.791 44.000 0.000 0.002   NA
 5830914 5830915 SPN23F_10590 SPN23F_10600 zmpD   FALSE 0.069 254.000 0.000 1.000   NA
 5830915 5830916 SPN23F_10600 SPN23F_10610   rnh TRUE 0.984 -13.000 0.148 1.000   NA
 5830916 5830917 SPN23F_10610 SPN23F_10620 rnh   TRUE 0.874 16.000 0.002 1.000 N NA
 5830917 5830918 SPN23F_10620 SPN23F_10630     FALSE 0.059 584.000 0.000 1.000 N NA
 5830919 5830920 SPN23F_10640 SPN23F_10650   acoL TRUE 0.782 64.000 0.200 1.000 N NA
 5830920 5830921 SPN23F_10650 SPN23F_10660 acoL acoC TRUE 0.923 64.000 0.227 1.000 Y NA
 5830921 5830922 SPN23F_10660 SPN23F_10670 acoC pdhB TRUE 0.507 218.000 0.103 0.046 Y NA
 5830922 5830923 SPN23F_10670 SPN23F_10680 pdhB pdhA TRUE 0.997 16.000 0.769 0.001 Y NA
 5830923 5830924 SPN23F_10680 SPN23F_10690 pdhA   FALSE 0.071 154.000 0.000 1.000 N NA
 5830924 5830925 SPN23F_10690 SPN23F_10700   pyrC FALSE 0.056 285.000 0.000 1.000 N NA
 5830925 5830926 SPN23F_10700 SPN23F_10710 pyrC mutX TRUE 0.904 13.000 0.005 1.000 N NA
 5830926 5830927 SPN23F_10710 SPN23F_10720 mutX ung TRUE 0.983 10.000 0.043 1.000 Y NA
 5830927 5830928 SPN23F_10720 SPN23F_10730 ung   FALSE 0.093 136.000 0.000 NA   NA
 5830928 5830929 SPN23F_10730 SPN23F_10740     TRUE 0.868 14.000 0.000 NA   NA
 5830929 5830930 SPN23F_10740 SPN23F_10750     FALSE 0.071 459.000 0.000 1.000   NA
 5830930 5830931 SPN23F_10750 SPN23F_10770   phpA FALSE 0.066 419.000 0.000 NA   NA
 5830931 5830932 SPN23F_10770 SPN23F_10780 phpA pstI FALSE 0.064 254.000 0.000 NA   NA
 5830932 5830933 SPN23F_10780 SPN23F_10790 pstI ptsH TRUE 0.995 6.000 0.240 0.018 Y NA
 5830934 5830935 SPN23F_10800 SPN23F_10810 nrdH   TRUE 0.778 81.000 0.562 1.000 N NA
 5830935 5830936 SPN23F_10810 SPN23F_10820     TRUE 0.765 188.000 0.500 0.001 Y NA
 5830936 5830937 SPN23F_10820 SPN23F_10830   lacR1 FALSE 0.150 288.000 0.056 1.000 N NA
 5830938 5830939 SPN23F_10850 SPN23F_10860 lacG2 lacE2 TRUE 0.510 215.000 0.200 1.000 Y NA
 5830939 5830940 SPN23F_10860 SPN23F_10870 lacE2 lacF TRUE 0.998 2.000 0.600 0.018 Y NA
 5830940 5830941 SPN23F_10870 SPN23F_10880 lacF lacT2 TRUE 0.959 36.000 0.500 1.000   NA
 5830941 5830942 SPN23F_10880 SPN23F_10890 lacT2 lacD2 FALSE 0.070 234.000 0.000 1.000   NA
 5830942 5830943 SPN23F_10890 SPN23F_10900 lacD2 lacC2 TRUE 0.999 2.000 0.800 0.001 Y NA
 5830943 5830944 SPN23F_10900 SPN23F_10910 lacC2 lacB1 TRUE 0.995 11.000 0.500 1.000 Y NA
 5830944 5830945 SPN23F_10910 SPN23F_10920 lacB1 lacA TRUE 0.988 31.000 0.333 0.001 Y NA
 5830945 5830946 SPN23F_10920 SPN23F_10930 lacA   FALSE 0.080 158.000 0.000 NA   NA
 5830946 5830947 SPN23F_10930 SPN23F_10940     TRUE 0.911 4.000 0.000 NA   NA
 5830947 5830948 SPN23F_10940 SPN23F_10970     TRUE 0.896 8.000 0.000 NA   NA
 5830948 5830949 SPN23F_10970 SPN23F_10980     TRUE 0.686 38.000 0.000 NA   NA
 5830949 5830950 SPN23F_10980 SPN23F_11000   lepA FALSE 0.058 413.000 0.000 1.000 N NA
 5830950 5830951 SPN23F_11000 SPN23F_11010 lepA   TRUE 0.352 79.000 0.002 1.000   NA
 5830951 5830952 SPN23F_11010 SPN23F_11020   recN TRUE 0.953 2.000 0.005 1.000   NA
 5830952 5830953 SPN23F_11020 SPN23F_11030 recN   TRUE 0.951 7.000 0.037 1.000 N NA
 5830953 5830954 SPN23F_11030 SPN23F_11040     TRUE 0.972 -7.000 0.048 1.000 N NA
 5830954 5830955 SPN23F_11040 SPN23F_11050   fps TRUE 0.975 -7.000 0.058 1.000 N NA
 5830955 5830956 SPN23F_11050 SPN23F_11060 fps xseB TRUE 0.980 -3.000 0.100 1.000 N NA
 5830956 5830957 SPN23F_11060 SPN23F_11070 xseB xseA TRUE 0.998 -22.000 0.412 0.001 Y NA
 5830957 5830958 SPN23F_11070 SPN23F_11080 xseA udk FALSE 0.121 128.000 0.002 1.000 N NA
 5830958 5830959 SPN23F_11080 SPN23F_11090 udk   FALSE 0.142 108.000 0.000 NA   NA
 5830959 5830960 SPN23F_11090 SPN23F_11100   truB FALSE 0.065 241.000 0.000 NA   NA
 5830960 5830961 SPN23F_11100 SPN23F_11110 truB   TRUE 0.935 10.000 0.014 NA   NA
 5830961 5830962 SPN23F_11110 SPN23F_11120   cysD FALSE 0.176 96.000 0.000 NA   NA
 5830962 5830963 SPN23F_11120 SPN23F_11140 cysD   FALSE 0.084 148.000 0.000 NA   NA
 5830963 5830964 SPN23F_11140 SPN23F_11150   srtA FALSE 0.053 244.000 0.000 NA N NA
 5830964 5830965 SPN23F_11150 SPN23F_11160 srtA gyrA TRUE 0.956 0.000 0.013 NA N NA
 5830967 5830968 SPN23F_11180 SPN23F_11190     TRUE 0.625 47.000 0.000 NA   NA
 5830968 5830969 SPN23F_11190 SPN23F_11200     TRUE 0.990 2.000 0.400 NA   NA
 5830969 5830970 SPN23F_11200 SPN23F_11210   vicX TRUE 0.198 91.000 0.000 NA   NA
 5830970 5830971 SPN23F_11210 SPN23F_11220 vicX vicK TRUE 0.970 2.000 0.038 1.000   NA
 5830971 5830972 SPN23F_11220 SPN23F_11230 vicK vicR TRUE 0.998 -7.000 0.597 0.011 Y NA
 5830972 5830973 SPN23F_11230 SPN23F_11240 vicR mutY TRUE 0.585 55.000 0.002 1.000 N NA
 5830973 5830974 SPN23F_11240 SPN23F_11250 mutY fhs1 FALSE 0.056 328.000 0.000 1.000 N NA
 5830975 5830976 SPN23F_11260 SPN23F_11270 dpfB coaC TRUE 0.934 12.000 0.013 1.000   NA
 5830976 5830977 SPN23F_11270 SPN23F_11280 coaC   TRUE 0.963 -16.000 0.019 NA   NA
 5830977 5830978 SPN23F_11280 SPN23F_11290     FALSE 0.130 282.000 0.026 NA   NA
 5830978 5830979 SPN23F_11290 SPN23F_11300     TRUE 0.965 12.000 0.107 NA   NA
 5830980 5830981 SPN23F_11310 SPN23F_11320     TRUE 0.508 74.000 0.021 1.000   NA
 5830981 5830982 SPN23F_11320 SPN23F_11330     TRUE 0.974 -34.000 0.014 0.012   NA
 5830982 5830983 SPN23F_11330 SPN23F_11340   uvrB TRUE 0.899 10.000 0.002 1.000 N NA
 5830983 5830984 SPN23F_11340 SPN23F_11350 uvrB   TRUE 0.357 77.000 0.002 NA   NA
 5830985 5830986 SPN23F_11360 SPN23F_11370   glnQ1 TRUE 0.996 0.000 0.326 1.000 Y NA
 5830986 5830987 SPN23F_11370 SPN23F_11380 glnQ1 zwf FALSE 0.146 149.000 0.021 1.000 N NA
 5830988 5830989 SPN23F_11390 SPN23F_11400 ftsY   TRUE 0.959 4.000 0.005 0.078   NA
 5830989 5830990 SPN23F_11400 SPN23F_11410     TRUE 0.988 0.000 0.103 0.018   NA
 5830990 5830991 SPN23F_11410 SPN23F_11420   smc TRUE 0.962 -3.000 0.006 1.000   NA
 5830991 5830992 SPN23F_11420 SPN23F_11430 smc rnc TRUE 0.981 -9.000 0.120 1.000 N NA
 5830992 5830993 SPN23F_11430 SPN23F_t08 rnc tRNA-Arg FALSE 0.072 183.000 0.000 NA   NA
 5830993 5830994 SPN23F_t08 SPN23F_11440 tRNA-Arg   TRUE 0.434 64.000 0.000 NA   NA
 5830994 5830995 SPN23F_11440 SPN23F_11450     FALSE 0.053 234.000 0.000 NA N NA
 5830995 5830996 SPN23F_11450 SPN23F_11460     TRUE 0.997 -13.000 0.467 NA Y NA
 5830996 5830997 SPN23F_11460 SPN23F_11470     FALSE 0.078 164.000 0.000 NA   NA
 5830997 5830998 SPN23F_11470 SPN23F_11500     FALSE 0.067 219.000 0.000 NA   NA
 5830998 5830999 SPN23F_11500 SPN23F_11510     TRUE 0.911 4.000 0.000 NA   NA
 5830999 5831000 SPN23F_11510 SPN23F_11520   leuB TRUE 0.961 -3.000 0.007 NA   NA
 5831000 5831001 SPN23F_11520 SPN23F_11530 leuB leuA TRUE 0.878 12.000 0.000 NA   NA
 5831001 5831002 SPN23F_11530 SPN23F_11550 leuA   TRUE 0.822 19.000 0.000 NA   NA
 5831002 5831003 SPN23F_11550 SPN23F_11560     TRUE 0.815 44.000 0.040 NA   NA
 5831003 5831004 SPN23F_11560 SPN23F_11570     TRUE 0.310 93.000 0.015 NA   NA
 5831004 5831005 SPN23F_11570 SPN23F_11580   topA FALSE 0.146 106.000 0.000 NA   NA
 5831005 5831006 SPN23F_11580 SPN23F_11590 topA   FALSE 0.077 167.000 0.000 NA   NA
 5831006 5831007 SPN23F_11590 SPN23F_11600     FALSE 0.070 889.000 0.000 NA   NA
 5831007 5831008 SPN23F_11600 SPN23F_11610   licC TRUE 0.204 96.000 0.002 1.000 N NA
 5831008 5831009 SPN23F_11610 SPN23F_11620 licC   TRUE 0.969 12.000 0.133 1.000   NA
 5831009 5831010 SPN23F_11620 SPN23F_11630     TRUE 0.994 -10.000 0.667 NA   NA
 5831010 5831011 SPN23F_11630 SPN23F_11640     TRUE 0.936 17.000 0.074 NA N NA
 5831011 5831012 SPN23F_11640 SPN23F_11650     TRUE 0.985 5.000 0.367 1.000 N NA
 5831013 5831014 SPN23F_11660 SPN23F_11670     TRUE 0.987 10.000 0.500 NA   NA
 5831014 5831015 SPN23F_11670 SPN23F_11680     TRUE 0.998 2.000 1.000 NA Y NA
 5831016 5831017 SPN23F_11690 SPN23F_11700 carB carA TRUE 0.559 312.000 0.117 0.001 Y NA
 5831017 5831018 SPN23F_11700 SPN23F_11710 carA pyrB TRUE 0.902 50.000 0.014 1.000 Y NA
 5831018 5831019 SPN23F_11710 SPN23F_11720 pyrB pyrR TRUE 0.987 19.000 0.247 1.000 Y NA
 5831019 5831020 SPN23F_11720 SPN23F_11730 pyrR nth FALSE 0.057 235.000 0.000 1.000 N NA
 5831020 5831021 SPN23F_11730 SPN23F_11740 nth   TRUE 0.951 0.000 0.002 NA   NA
 5831022 5831023 SPN23F_11750 SPN23F_11760     FALSE 0.065 249.000 0.000 NA   NA
 5831023 5831024 SPN23F_11760 SPN23F_11770     FALSE 0.069 315.000 0.000 1.000   NA
 5831025 5831026 SPN23F_11780 SPN23F_11790 htpX   TRUE 0.986 2.000 0.222 NA   NA
 5831027 5831028 SPN23F_11800 SPN23F_11810 gidB pyrP FALSE 0.057 352.000 0.000 1.000 N NA
 5831029 5831030 SPN23F_11820 SPN23F_11830 ffh   TRUE 0.971 12.000 0.151 1.000   NA
 5831030 5831031 SPN23F_11830 SPN23F_11840     TRUE 0.294 91.000 0.009 NA   NA
 5831032 5831033 SPN23F_11850 SPN23F_11860     TRUE 0.947 13.000 0.035 1.000   NA
 5831034 5831035 SPN23F_t09 SPN23F_11870 tRNA-Arg rplS TRUE 0.662 42.000 0.000 NA   NA
 5831035 5831036 SPN23F_11870 SPN23F_11880 rplS   FALSE 0.144 119.000 0.004 1.000 N NA
 5831036 5831037 SPN23F_11880 SPN23F_11890     TRUE 0.996 -6.000 0.160 0.077 Y NA
 5831037 5831038 SPN23F_11890 SPN23F_11900     TRUE 0.966 -3.000 0.023 1.000 N NA
 5831038 5831039 SPN23F_11900 SPN23F_11910     TRUE 0.377 116.000 0.167 1.000 N NA
 5831040 5831041 SPN23F_11920 SPN23F_11930   rpmE TRUE 0.318 96.000 0.020 1.000   NA
 5831042 5831043 SPN23F_11940 SPN23F_11950     TRUE 0.917 3.000 0.000 NA   NA
 5831045 5831046 SPN23F_11980 SPN23F_11990     TRUE 0.508 58.000 0.000 NA   NA
 5831046 5831047 SPN23F_11990 SPN23F_12010     FALSE 0.075 174.000 0.000 NA   NA
 5831047 5831048 SPN23F_12010 SPN23F_12020     FALSE 0.064 263.000 0.000 NA   NA
 5831050 5831051 SPN23F_12050 SPN23F_12060     TRUE 0.924 -19.000 0.000 NA   NA
 5831051 5831052 SPN23F_12060 SPN23F_12070   ntpD FALSE 0.064 273.000 0.000 NA   NA
 5831052 5831053 SPN23F_12070 SPN23F_12080 ntpD ntpB TRUE 0.989 23.000 0.238 0.004 Y NA
 5831053 5831054 SPN23F_12080 SPN23F_12090 ntpB ntpA TRUE 0.999 1.000 0.776 0.004 Y NA
 5831054 5831055 SPN23F_12090 SPN23F_12100 ntpA   TRUE 0.967 63.000 0.462 0.004 Y NA
 5831055 5831056 SPN23F_12100 SPN23F_12110   ntpC TRUE 0.998 -10.000 0.487 0.004 Y NA
 5831056 5831057 SPN23F_12110 SPN23F_12120 ntpC ntpE TRUE 0.819 65.000 0.097 0.004   NA
 5831057 5831058 SPN23F_12120 SPN23F_12130 ntpE ntpK TRUE 0.920 34.000 0.045 0.004   NA
 5831058 5831059 SPN23F_12130 SPN23F_12140 ntpK ntpI TRUE 0.993 16.000 0.848 0.004   NA
 5831059 5831060 SPN23F_12140 SPN23F_12150 ntpI   TRUE 0.969 -10.000 0.029 NA   NA
 5831060 5831061 SPN23F_12150 SPN23F_12160     TRUE 0.959 25.000 0.333 NA   NA
 5831061 5831062 SPN23F_12160 SPN23F_12170     TRUE 0.510 157.000 0.667 NA   NA
 5831062 5831063 SPN23F_12170 SPN23F_12180     TRUE 0.691 40.000 0.000 1.000   NA
 5831063 5831064 SPN23F_12180 SPN23F_12190     TRUE 0.978 2.000 0.000 NA Y NA
 5831064 5831065 SPN23F_12190 SPN23F_12200     TRUE 0.863 26.000 0.037 NA N NA
 5831065 5831066 SPN23F_12200 SPN23F_12210   nanA TRUE 0.955 28.000 0.037 1.000 Y NA
 5831066 5831067 SPN23F_12210 SPN23F_12220 nanA nanE TRUE 0.736 25.000 0.000 1.000 N NA
 5831071 5831072 SPN23F_12260 SPN23F_12270     TRUE 0.984 -24.000 0.000 0.060 Y NA
 5831072 5831073 SPN23F_12270 SPN23F_12280     FALSE 0.064 296.000 0.000 NA   NA
 5831073 5831074 SPN23F_12280 SPN23F_12290     FALSE 0.095 134.000 0.000 NA   NA
 5831074 5831075 SPN23F_12290 SPN23F_12300     TRUE 0.917 3.000 0.000 NA   NA
 5831075 5831076 SPN23F_12300 SPN23F_12310     TRUE 0.958 15.000 0.000 1.000 Y NA
 5831076 5831077 SPN23F_12310 SPN23F_12320   ptrB TRUE 0.929 -3.000 0.000 1.000 N NA
 5831077 5831078 SPN23F_12320 SPN23F_12330 ptrB   TRUE 0.928 33.000 0.182 1.000   NA
 5831078 5831079 SPN23F_12330 SPN23F_12340     FALSE 0.073 179.000 0.000 NA   NA
 5831079 5831080 SPN23F_12340 SPN23F_12350     FALSE 0.070 202.000 0.000 NA   NA
 5831080 5831081 SPN23F_12350 SPN23F_12360     TRUE 0.917 3.000 0.000 NA   NA
 5831081 5831082 SPN23F_12360 SPN23F_12370     TRUE 0.875 13.000 0.000 NA   NA
 5831082 5831083 SPN23F_12370 SPN23F_12380     TRUE 0.936 -7.000 0.000 NA   NA
 5831083 5831084 SPN23F_12380 SPN23F_12390     TRUE 0.896 8.000 0.000 NA   NA
 5831084 5831085 SPN23F_12390 SPN23F_12400     TRUE 0.935 0.000 0.000 NA   NA
 5831085 5831086 SPN23F_12400 SPN23F_12410     FALSE 0.065 253.000 0.000 NA   NA
 5831086 5831087 SPN23F_12410 SPN23F_12420     TRUE 0.921 -28.000 0.000 NA   NA
 5831087 5831088 SPN23F_12420 SPN23F_12430     FALSE 0.068 601.000 0.000 NA   NA
 5831088 5831089 SPN23F_12430 SPN23F_12440     TRUE 0.930 -13.000 0.000 NA   NA
 5831089 5831090 SPN23F_12440 SPN23F_12450     TRUE 0.905 5.000 0.000 NA   NA
 5831090 5831091 SPN23F_12450 SPN23F_12460     FALSE 0.065 384.000 0.000 NA   NA
 5831091 5831092 SPN23F_12460 SPN23F_12470     TRUE 0.409 66.000 0.000 NA   NA
 5831092 5831093 SPN23F_12470 SPN23F_12480     FALSE 0.112 122.000 0.000 NA   NA
 5831093 5831094 SPN23F_12480 SPN23F_12490     TRUE 0.337 72.000 0.000 NA   NA
 5831094 5831095 SPN23F_12490 SPN23F_12500     TRUE 0.228 85.000 0.000 NA   NA
 5831095 5831096 SPN23F_12500 SPN23F_12510     FALSE 0.064 262.000 0.000 NA   NA
 5831096 5831097 SPN23F_12510 SPN23F_12520     FALSE 0.066 417.000 0.000 NA   NA
 5831097 5831098 SPN23F_12520 SPN23F_12530     TRUE 0.930 -13.000 0.000 NA   NA
 5831098 5831099 SPN23F_12530 SPN23F_12540     TRUE 0.715 53.000 0.016 NA   NA
 5831099 5831100 SPN23F_12540 SPN23F_12550     TRUE 0.190 93.000 0.000 NA   NA
 5831100 5831101 SPN23F_12550 SPN23F_12560     TRUE 0.208 89.000 0.000 NA   NA
 5831101 5831102 SPN23F_12560 SPN23F_12570     FALSE 0.064 322.000 0.000 NA   NA
 5831104 5831105 SPN23F_12590 SPN23F_12600     FALSE 0.075 171.000 0.000 NA   NA
 5831105 5831106 SPN23F_12600 SPN23F_12610     FALSE 0.065 239.000 0.000 NA   NA
 5831106 5831107 SPN23F_12610 SPN23F_12620     FALSE 0.066 476.000 0.000 NA   NA
 5831107 5831108 SPN23F_12620 SPN23F_12630     TRUE 0.939 0.000 0.000 1.000   NA
 5831108 5831109 SPN23F_12630 SPN23F_12640     TRUE 0.361 70.000 0.000 NA   NA
 5831109 5831110 SPN23F_12640 SPN23F_12650     TRUE 0.686 38.000 0.000 NA   NA
 5831110 5831111 SPN23F_12650 SPN23F_12660     TRUE 0.938 -3.000 0.000 NA   NA
 5831111 5831112 SPN23F_12660 SPN23F_12670     TRUE 0.595 51.000 0.000 NA   NA
 5831112 5831113 SPN23F_12670 SPN23F_12680     TRUE 0.885 10.000 0.000 NA   NA
 5831113 5831114 SPN23F_12680 SPN23F_12690     FALSE 0.067 221.000 0.000 NA   NA
 5831114 5831115 SPN23F_12690 SPN23F_12700     TRUE 0.971 7.000 0.000 1.000 Y NA
 5831115 5831116 SPN23F_12700 SPN23F_12701     TRUE 0.815 83.000 0.750 NA   NA
 5831116 5831117 SPN23F_12701 SPN23F_12710     FALSE 0.086 145.000 0.000 NA   NA
 5831117 5831118 SPN23F_12710 SPN23F_12720     TRUE 0.617 49.000 0.000 NA   NA
 5831118 5831119 SPN23F_12720 SPN23F_12730     TRUE 0.936 -7.000 0.000 NA   NA
 5831119 5831120 SPN23F_12730 SPN23F_12740     FALSE 0.074 178.000 0.000 NA   NA
 5831122 5831123 SPN23F_12760 SPN23F_12770     TRUE 0.991 14.000 1.000 NA   NA
 5831123 5831124 SPN23F_12770 SPN23F_12790     FALSE 0.070 1127.000 0.000 NA   NA
 5831124 5831125 SPN23F_12790 SPN23F_12820     FALSE 0.071 5909.000 0.000 NA   NA
 5831125 5831126 SPN23F_12820 SPN23F_12830     FALSE 0.082 152.000 0.000 NA   NA
 5831126 5831127 SPN23F_12830 SPN23F_12840     FALSE 0.065 238.000 0.000 NA   NA
 5831127 5831128 SPN23F_12840 SPN23F_12850     TRUE 0.878 12.000 0.000 NA   NA
 5831128 5831129 SPN23F_12850 SPN23F_12860     TRUE 0.933 -10.000 0.000 NA   NA
 5831129 5831130 SPN23F_12860 SPN23F_12870     TRUE 0.552 54.000 0.000 NA   NA
 5831130 5831131 SPN23F_12870 SPN23F_12880     TRUE 0.843 17.000 0.000 NA   NA
 5831131 5831132 SPN23F_12880 SPN23F_12890   traG TRUE 0.804 21.000 0.000 NA   NA
 5831132 5831133 SPN23F_12890 SPN23F_12900 traG   TRUE 0.938 -3.000 0.000 NA   NA
 5831133 5831134 SPN23F_12900 SPN23F_12910     TRUE 0.933 -10.000 0.000 NA   NA
 5831134 5831135 SPN23F_12910 SPN23F_12920     FALSE 0.064 283.000 0.000 NA   NA
 5831135 5831136 SPN23F_12920 SPN23F_12930     TRUE 0.935 0.000 0.000 NA   NA
 5831137 5831138 SPN23F_12940 SPN23F_12950 orf23 orf22 TRUE 0.822 19.000 0.000 NA   NA
 5831138 5831139 SPN23F_12950 SPN23F_12960 orf22 orf21 TRUE 0.737 29.000 0.000 NA   NA
 5831139 5831140 SPN23F_12960 SPN23F_12970 orf21 orf20 FALSE 0.079 178.000 0.000 1.000   NA
 5831140 5831141 SPN23F_12970 SPN23F_12980 orf20 orf19 TRUE 0.649 43.000 0.000 NA   NA
 5831141 5831142 SPN23F_12980 SPN23F_12990 orf19 orf18 FALSE 0.120 117.000 0.000 NA   NA
 5831142 5831143 SPN23F_12990 SPN23F_13000 orf18 orf17 FALSE 0.065 251.000 0.000 NA   NA
 5831143 5831144 SPN23F_13000 SPN23F_13010 orf17 orf16 TRUE 0.927 -16.000 0.000 NA   NA
 5831144 5831145 SPN23F_13010 SPN23F_13020 orf16 orf15 TRUE 0.917 3.000 0.000 NA   NA
 5831145 5831146 SPN23F_13020 SPN23F_13030 orf15 orf14 TRUE 0.822 19.000 0.000 NA   NA
 5831146 5831147 SPN23F_13030 SPN23F_13040 orf14 orf13 TRUE 0.861 15.000 0.000 NA   NA
 5831147 5831148 SPN23F_13040 SPN23F_13050 orf13 tetM FALSE 0.065 377.000 0.000 NA   NA
 5831150 5831151 SPN23F_13061 SPN23F_13070   orf7 FALSE 0.066 229.000 0.000 NA   NA
 5831151 5831152 SPN23F_13070 SPN23F_13080 orf7 xis FALSE 0.069 688.000 0.000 NA   NA
 5831152 5831153 SPN23F_13080 SPN23F_13090 xis   TRUE 0.262 82.000 0.000 NA   NA
 5831154 5831155 SPN23F_13110 SPN23F_13120     TRUE 0.917 3.000 0.000 NA   NA
 5831155 5831156 SPN23F_13120 SPN23F_13130     TRUE 0.875 13.000 0.000 NA   NA
 5831156 5831157 SPN23F_13130 SPN23F_13140     TRUE 0.936 -7.000 0.000 NA   NA
 5831157 5831158 SPN23F_13140 SPN23F_13150     TRUE 0.927 -16.000 0.000 NA   NA
 5831158 5831159 SPN23F_13150 SPN23F_13160     TRUE 0.587 99.000 0.333 NA   NA
 5831159 5831160 SPN23F_13160 SPN23F_13170     TRUE 0.991 -3.000 0.333 NA   NA
 5831160 5831161 SPN23F_13170 SPN23F_13190   rplL FALSE 0.070 202.000 0.000 NA   NA
 5831161 5831162 SPN23F_13190 SPN23F_13200 rplL rplJ TRUE 0.963 76.000 0.884 0.021 Y NA
 5831162 5831163 SPN23F_13200 SPN23F_13210 rplJ   FALSE 0.057 250.000 0.000 1.000 N NA
 5831163 5831164 SPN23F_13210 SPN23F_13220     FALSE 0.056 347.000 0.000 1.000 N NA
 5831164 5831165 SPN23F_13220 SPN23F_13230     TRUE 0.999 2.000 0.895 0.010 Y NA
 5831165 5831166 SPN23F_13230 SPN23F_13240   msrAB TRUE 0.689 58.000 0.035 1.000 N NA
 5831166 5831167 SPN23F_13240 SPN23F_13260 msrAB thrB FALSE 0.057 250.000 0.000 1.000 N NA
 5831167 5831168 SPN23F_13260 SPN23F_13270 thrB hom TRUE 0.989 2.000 0.036 1.000 Y NA
 5831168 5831169 SPN23F_13270 SPN23F_13280 hom mecA FALSE 0.167 151.000 0.044 NA N NA
 5831169 5831170 SPN23F_13280 SPN23F_13290 mecA   FALSE 0.070 200.000 0.000 NA   NA
 5831170 5831171 SPN23F_13290 SPN23F_13300     TRUE 0.953 29.000 0.333 NA   NA
 5831171 5831172 SPN23F_13300 SPN23F_13310     TRUE 0.970 16.000 0.222 NA   NA
 5831172 5831173 SPN23F_13310 SPN23F_13320     TRUE 0.988 2.000 0.250 1.000   NA
 5831173 5831174 SPN23F_13320 SPN23F_13330     TRUE 0.981 -7.000 0.000 NA Y NA
 5831174 5831175 SPN23F_13330 SPN23F_13340     FALSE 0.051 279.000 0.000 NA N NA
 5831175 5831176 SPN23F_13340 SPN23F_13350   pheA TRUE 0.965 -3.000 0.025 NA N NA
 5831176 5831177 SPN23F_13350 SPN23F_13360 pheA aroK TRUE 0.990 -3.000 0.025 1.000 Y NA
 5831177 5831178 SPN23F_13360 SPN23F_13370 aroK aroA TRUE 0.988 -7.000 0.012 1.000 Y NA
 5831178 5831179 SPN23F_13370 SPN23F_13380 aroA   TRUE 0.253 92.000 0.003 NA   NA
 5831179 5831180 SPN23F_13380 SPN23F_13390   tyrA TRUE 0.955 11.000 0.058 NA   NA
 5831180 5831181 SPN23F_13390 SPN23F_13400 tyrA aroF TRUE 0.977 10.000 0.010 1.000 Y NA
 5831181 5831182 SPN23F_13400 SPN23F_13410 aroF aroB TRUE 0.993 10.000 0.110 0.004 Y NA
 5831182 5831183 SPN23F_13410 SPN23F_13420 aroB aroE TRUE 0.963 19.000 0.010 1.000 Y NA
 5831183 5831184 SPN23F_13420 SPN23F_13430 aroE aroD TRUE 0.981 -10.000 0.000 1.000 Y NA
 5831184 5831185 SPN23F_13430 SPN23F_13440 aroD   TRUE 0.938 -3.000 0.000 NA   NA
 5831185 5831186 SPN23F_13440 SPN23F_13450     FALSE 0.069 676.000 0.000 NA   NA
 5831186 5831187 SPN23F_13450 SPN23F_13460     TRUE 0.989 -19.000 0.341 NA   NA
 5831189 5831190 SPN23F_13480 SPN23F_13490 alaS   TRUE 0.857 22.000 0.006 NA   NA
 5831190 5831191 SPN23F_13490 SPN23F_13500   potD FALSE 0.069 775.000 0.000 NA   NA
 5831191 5831192 SPN23F_13500 SPN23F_13510 potD potC TRUE 0.997 -3.000 0.253 0.040 Y NA
 5831192 5831193 SPN23F_13510 SPN23F_13520 potC potB TRUE 0.998 -3.000 0.492 0.040 Y NA
 5831193 5831194 SPN23F_13520 SPN23F_13530 potB potA TRUE 0.999 -19.000 0.928 0.040 Y NA
 5831194 5831195 SPN23F_13530 SPN23F_13540 potA murB TRUE 0.685 59.000 0.041 1.000 N NA
 5831195 5831196 SPN23F_13540 SPN23F_13550 murB   TRUE 0.189 112.000 0.005 NA   NA
 5831196 5831197 SPN23F_13550 SPN23F_13560   aldB TRUE 0.951 10.000 0.042 NA   NA
 5831199 5831200 SPN23F_13580 SPN23F_13590   phoU FALSE 0.065 157.000 0.000 NA N NA
 5831200 5831201 SPN23F_13590 SPN23F_13600 phoU pstB1 TRUE 0.994 12.000 0.413 NA Y NA
 5831201 5831202 SPN23F_13600 SPN23F_13610 pstB1 pstB2 TRUE 0.997 13.000 0.542 0.002 Y NA
 5831202 5831203 SPN23F_13610 SPN23F_13620 pstB2   TRUE 0.996 11.000 0.490 0.003 Y NA
 5831203 5831204 SPN23F_13620 SPN23F_13630     TRUE 0.997 -10.000 0.907 0.074   NA
 5831204 5831205 SPN23F_13630 SPN23F_13640     TRUE 0.700 52.000 0.000 0.040   NA
 5831205 5831206 SPN23F_13640 SPN23F_13650   pstS TRUE 0.991 0.000 0.206 0.040   NA
 5831206 5831207 SPN23F_13650 SPN23F_13670 pstS   TRUE 0.299 574.000 0.303 NA N NA
 5831207 5831208 SPN23F_13670 SPN23F_13680     TRUE 0.985 1.000 0.229 NA N NA
 5831208 5831209 SPN23F_13680 SPN23F_13690     TRUE 0.990 -10.000 0.337 NA   NA
 5831209 5831210 SPN23F_13690 SPN23F_13700   spxA TRUE 0.810 60.000 0.169 NA   NA
 5831210 5831211 SPN23F_13700 SPN23F_13710 spxA   FALSE 0.068 210.000 0.000 NA   NA
 5831211 5831212 SPN23F_13710 SPN23F_13720     TRUE 0.990 -10.000 0.330 NA   NA
 5831212 5831213 SPN23F_13720 SPN23F_13730     TRUE 0.949 11.000 0.055 1.000 N NA
 5831213 5831214 SPN23F_13730 SPN23F_13740   hemN TRUE 0.962 5.000 0.060 1.000 N NA
 5831214 5831215 SPN23F_13740 SPN23F_13750 hemN   TRUE 0.397 84.000 0.021 NA   NA
 5831215 5831216 SPN23F_13750 SPN23F_13760     TRUE 0.968 16.000 0.206 NA   NA
 5831216 5831217 SPN23F_13760 SPN23F_13770   lgt TRUE 0.978 1.000 0.079 NA   NA
 5831217 5831218 SPN23F_13770 SPN23F_13780 lgt ptsK TRUE 0.992 -7.000 0.494 1.000 N NA
 5831218 5831219 SPN23F_13780 SPN23F_13790 ptsK rpsU FALSE 0.169 130.000 0.011 1.000   NA
 5831219 5831220 SPN23F_13790 SPN23F_13800 rpsU nagB FALSE 0.154 140.000 0.011 1.000   NA
 5831222 5831223 SPN23F_13820 SPN23F_13830     FALSE 0.069 657.000 0.000 NA   NA
 5831223 5831224 SPN23F_13830 SPN23F_13840   nadE FALSE 0.089 350.000 0.007 1.000 N NA
 5831224 5831225 SPN23F_13840 SPN23F_13850 nadE   TRUE 0.997 -3.000 0.194 0.003 Y NA
 5831225 5831226 SPN23F_13850 SPN23F_13860     TRUE 0.228 116.000 0.021 NA   NA
 5831226 5831227 SPN23F_13860 SPN23F_13870     TRUE 0.981 -10.000 0.103 NA   NA
 5831227 5831228 SPN23F_13870 SPN23F_13880     FALSE 0.065 386.000 0.000 NA   NA
 5831228 5831229 SPN23F_13880 SPN23F_13890     TRUE 0.852 16.000 0.000 NA   NA
 5831229 5831230 SPN23F_13890 SPN23F_13910     FALSE 0.067 508.000 0.000 NA   NA
 5831230 5831231 SPN23F_13910 SPN23F_13930     TRUE 0.195 589.000 0.013 0.005   NA
 5831232 5831233 SPN23F_13940 SPN23F_13960     TRUE 0.938 -3.000 0.000 NA   NA
 5831235 5831236 SPN23F_13990 SPN23F_14000     TRUE 0.997 -16.000 0.294 0.010 Y NA
 5831236 5831237 SPN23F_14000 SPN23F_14010     TRUE 0.879 11.000 0.000 NA   NA
 5831237 5831238 SPN23F_14010 SPN23F_14020     TRUE 0.996 0.000 1.000 NA   NA
 5831238 5831239 SPN23F_14020 SPN23F_14030     TRUE 0.991 -12.000 0.357 1.000   NA
 5831240 5831241 SPN23F_14040 SPN23F_14070     TRUE 0.930 -13.000 0.000 NA   NA
 5831241 5831242 SPN23F_14070 SPN23F_14080     FALSE 0.076 170.000 0.000 NA   NA
 5831242 5831243 SPN23F_14080 SPN23F_14090     TRUE 0.924 -19.000 0.000 NA   NA
 5831243 5831244 SPN23F_14090 SPN23F_14100   guaA FALSE 0.064 304.000 0.000 NA   NA
 5831246 5831247 SPN23F_14120 SPN23F_14130     TRUE 0.959 9.000 0.047 1.000   NA
 5831247 5831248 SPN23F_14130 SPN23F_14140     TRUE 0.991 -3.000 0.326 NA   NA
 5831248 5831249 SPN23F_14140 SPN23F_14150     TRUE 0.240 84.000 0.000 NA   NA
 5831249 5831250 SPN23F_14150 SPN23F_14160     TRUE 0.983 2.000 0.143 1.000   NA
 5831250 5831251 SPN23F_14160 SPN23F_14170     TRUE 0.792 22.000 0.000 NA   NA
 5831252 5831253 SPN23F_14200 SPN23F_14210 def   TRUE 0.885 45.000 0.002 1.000 Y NA
 5831254 5831255 SPN23F_14220 SPN23F_14230     TRUE 0.730 66.000 0.117 NA   NA
 5831255 5831256 SPN23F_14230 SPN23F_14240     TRUE 0.755 78.000 0.364 NA   NA
 5831256 5831257 SPN23F_14240 SPN23F_14250     TRUE 0.996 0.000 0.310 1.000 Y NA
 5831257 5831258 SPN23F_14250 SPN23F_14260     FALSE 0.117 158.000 0.010 1.000 N NA
 5831258 5831259 SPN23F_14260 SPN23F_14270   ogt TRUE 0.945 13.000 0.050 1.000 N NA
 5831259 5831260 SPN23F_14270 SPN23F_14280 ogt   TRUE 0.968 0.000 0.019 1.000   NA
 5831261 5831262 SPN23F_14290 SPN23F_14300     TRUE 0.986 -3.000 0.146 1.000   NA
 5831263 5831264 SPN23F_14310 SPN23F_14320     TRUE 0.997 1.000 0.488 NA Y NA
 5831264 5831265 SPN23F_14320 SPN23F_14330   nox FALSE 0.126 152.000 0.005 1.000   NA
 5831266 5831267 SPN23F_14350 SPN23F_14360     TRUE 0.843 60.000 0.243 NA   NA
 5831267 5831268 SPN23F_14360 SPN23F_14370     TRUE 0.982 18.000 0.588 NA   NA
 5831269 5831270 SPN23F_14380 SPN23F_14390   glyS TRUE 0.801 42.000 0.020 NA   NA
 5831270 5831271 SPN23F_14390 SPN23F_14400 glyS glyQ TRUE 0.776 260.000 0.651 0.001 Y NA
 5831271 5831272 SPN23F_14400 SPN23F_14410 glyQ   TRUE 0.869 19.000 0.003 NA   NA
 5831272 5831273 SPN23F_14410 SPN23F_14420     FALSE 0.064 273.000 0.000 NA   NA
 5831273 5831274 SPN23F_14420 SPN23F_14430     FALSE 0.139 114.000 0.000 1.000   NA
 5831274 5831275 SPN23F_14430 SPN23F_14440     FALSE 0.064 289.000 0.000 NA   NA
 5831276 5831277 SPN23F_14450 SPN23F_14460     TRUE 0.988 -3.000 0.200 1.000   NA
 5831280 5831281 SPN23F_14530 SPN23F_14540 tufA   FALSE 0.068 164.000 0.000 1.000 N NA
 5831281 5831282 SPN23F_14540 SPN23F_14560   gla FALSE 0.061 1038.000 0.000 1.000 N NA
 5831282 5831283 SPN23F_14560 SPN23F_14570 gla   FALSE 0.067 224.000 0.000 NA   NA
 5831283 5831284 SPN23F_14570 SPN23F_14590     FALSE 0.147 105.000 0.000 NA   NA
 5831284 5831285 SPN23F_14590 SPN23F_14600     FALSE 0.065 343.000 0.000 NA   NA
 5831286 5831287 SPN23F_14630 SPN23F_14640 pgmA   TRUE 0.302 111.000 0.049 NA   NA
 5831288 5831289 SPN23F_14650 SPN23F_14660     TRUE 0.989 13.000 0.154 1.000 Y NA
 5831289 5831290 SPN23F_14660 SPN23F_14670     TRUE 0.989 10.000 0.130 1.000 Y NA
 5831290 5831291 SPN23F_14670 SPN23F_14680     FALSE 0.154 146.000 0.013 1.000   NA
 5831291 5831292 SPN23F_14680 SPN23F_14690     TRUE 0.990 -10.000 0.324 NA   NA
 5831294 5831295 SPN23F_14710 SPN23F_14720 atpC atpD TRUE 0.998 11.000 0.837 0.007 Y NA
 5831295 5831296 SPN23F_14720 SPN23F_14730 atpD atpG TRUE 0.935 86.000 0.724 0.007 Y NA
 5831296 5831297 SPN23F_14730 SPN23F_14740 atpG atpA TRUE 0.997 16.000 0.846 0.007 Y NA
 5831297 5831298 SPN23F_14740 SPN23F_14750 atpA atpH TRUE 0.997 15.000 0.864 0.007 Y NA
 5831298 5831299 SPN23F_14750 SPN23F_14760 atpH atpF TRUE 0.997 0.000 0.222 0.007 Y NA
 5831299 5831300 SPN23F_14760 SPN23F_14770 atpF atpB TRUE 0.986 14.000 0.032 0.008 Y NA
 5831300 5831301 SPN23F_14770 SPN23F_14780 atpB atpE TRUE 0.990 35.000 0.557 0.008 Y NA
 5831301 5831302 SPN23F_14780 SPN23F_14790 atpE   TRUE 0.283 75.000 0.000 1.000 N NA
 5831302 5831303 SPN23F_14790 SPN23F_14800     FALSE 0.058 445.000 0.000 1.000 N NA
 5831303 5831304 SPN23F_14800 SPN23F_14810   greA FALSE 0.056 298.000 0.000 1.000 N NA
 5831304 5831305 SPN23F_14810 SPN23F_14820 greA   TRUE 0.636 71.000 0.079 NA   NA
 5831305 5831306 SPN23F_14820 SPN23F_14830     TRUE 0.593 81.000 0.120 NA   NA
 5831306 5831307 SPN23F_14830 SPN23F_14840     TRUE 0.984 -3.000 0.037 0.011   NA
 5831307 5831308 SPN23F_14840 SPN23F_14850   murC TRUE 0.938 10.000 0.014 1.000   NA
 5831308 5831309 SPN23F_14850 SPN23F_14860 murC   TRUE 0.930 11.000 0.013 NA   NA
 5831309 5831310 SPN23F_14860 SPN23F_14870     TRUE 0.880 48.000 0.151 NA   NA
 5831310 5831311 SPN23F_14870 SPN23F_14880     FALSE 0.169 93.000 0.000 1.000 N NA
 5831311 5831312 SPN23F_14880 SPN23F_14890     TRUE 0.992 8.000 0.082 0.009 Y NA
 5831312 5831313 SPN23F_14890 SPN23F_14900     FALSE 0.070 158.000 0.000 1.000 N NA
 5831313 5831314 SPN23F_14900 SPN23F_14910     FALSE 0.100 172.000 0.000 0.055 N NA
 5831314 5831315 SPN23F_14910 SPN23F_14920     FALSE 0.075 204.000 0.000 1.000   NA
 5831317 5831318 SPN23F_14940 SPN23F_14950     TRUE 0.518 101.000 0.231 NA   NA
 5831318 5831319 SPN23F_14950 SPN23F_14960     TRUE 0.923 37.000 0.208 NA   NA
 5831319 5831320 SPN23F_14960 SPN23F_14970   ppaC TRUE 0.301 86.000 0.005 NA   NA
 5831320 5831321 SPN23F_14970 SPN23F_14980 ppaC   TRUE 0.419 71.000 0.005 1.000 N NA
 5831321 5831322 SPN23F_14980 SPN23F_14990     TRUE 0.987 -10.000 0.209 1.000   NA
 5831322 5831323 SPN23F_14990 SPN23F_15000     TRUE 0.674 54.000 0.006 1.000   NA
 5831323 5831324 SPN23F_15000 SPN23F_15010     TRUE 0.983 2.000 0.151 1.000   NA
 5831324 5831325 SPN23F_15010 SPN23F_15020   rpsR FALSE 0.069 295.000 0.000 1.000   NA
 5831325 5831326 SPN23F_15020 SPN23F_15030 rpsR ssb TRUE 0.804 32.000 0.012 1.000 N NA
 5831326 5831327 SPN23F_15030 SPN23F_15040 ssb rpsF TRUE 0.919 12.000 0.012 1.000 N NA
 5831327 5831328 SPN23F_15040 SPN23F_15050 rpsF asnS TRUE 0.248 153.000 0.000 1.000 Y NA
 5831328 5831329 SPN23F_15050 SPN23F_15060 asnS   TRUE 0.894 19.000 0.013 NA   NA
 5831329 5831330 SPN23F_15060 SPN23F_15070   aspC TRUE 0.974 -7.000 0.042 NA   NA
 5831330 5831331 SPN23F_15070 SPN23F_15080 aspC   TRUE 0.987 -3.000 0.205 NA   NA
 5831335 5831336 SPN23F_15130 SPN23F_15150     FALSE 0.066 422.000 0.000 NA   NA
 5831336 5831337 SPN23F_15150 SPN23F_15160   fms TRUE 0.942 12.000 0.028 NA   NA
 5831337 5831338 SPN23F_15160 SPN23F_15170 fms   FALSE 0.101 116.000 0.000 NA N NA
 5831338 5831339 SPN23F_15170 SPN23F_15180     TRUE 0.848 13.000 0.000 NA N NA
 5831339 5831340 SPN23F_15180 SPN23F_s15     TRUE 0.279 79.000 0.000 NA   NA
 5831342 5831343 SPN23F_15200 SPN23F_15210   cca TRUE 0.979 -3.000 0.056 1.000   NA
 5831343 5831344 SPN23F_15210 SPN23F_15220 cca dapB TRUE 0.925 12.000 0.015 1.000 N NA
 5831344 5831345 SPN23F_15220 SPN23F_15230 dapB   FALSE 0.091 266.000 0.004 NA   NA
 5831345 5831346 SPN23F_15230 SPN23F_15240     TRUE 0.981 2.000 0.139 NA   NA
 5831346 5831347 SPN23F_15240 SPN23F_15250     TRUE 0.410 74.000 0.003 1.000   NA
 5831347 5831348 SPN23F_15250 SPN23F_15260     TRUE 0.938 24.000 0.150 NA   NA
 5831348 5831349 SPN23F_15260 SPN23F_15270     TRUE 0.992 -13.000 0.502 NA   NA
 5831351 5831352 SPN23F_15290 SPN23F_15300   hol TRUE 0.988 4.000 0.400 NA   NA
 5831352 5831353 SPN23F_15300 SPN23F_15310 hol   TRUE 0.911 4.000 0.000 NA   NA
 5831353 5831354 SPN23F_15310 SPN23F_15320     TRUE 0.885 10.000 0.000 NA   NA
 5831354 5831355 SPN23F_15320 SPN23F_15330     TRUE 0.474 60.000 0.000 NA   NA
 5831355 5831356 SPN23F_15330 SPN23F_15340     TRUE 0.974 11.000 0.200 NA   NA
 5831356 5831357 SPN23F_15340 SPN23F_15350     TRUE 0.992 2.000 0.500 NA   NA
 5831357 5831358 SPN23F_15350 SPN23F_15360     TRUE 0.732 30.000 0.000 NA   NA
 5831358 5831359 SPN23F_15360 SPN23F_15370     TRUE 0.936 -7.000 0.000 NA   NA
 5831359 5831360 SPN23F_15370 SPN23F_15380     TRUE 0.968 13.000 0.150 NA   NA
 5831360 5831361 SPN23F_15380 SPN23F_15390     TRUE 0.925 65.000 1.000 NA   NA
 5831361 5831362 SPN23F_15390 SPN23F_15400     TRUE 0.996 -3.000 1.000 NA   NA
 5831362 5831363 SPN23F_15400 SPN23F_15410     TRUE 0.986 0.000 0.188 NA   NA
 5831363 5831364 SPN23F_15410 SPN23F_15420     TRUE 0.992 0.000 0.438 NA   NA
 5831364 5831365 SPN23F_15420 SPN23F_15430     TRUE 0.990 -10.000 0.333 NA   NA
 5831365 5831366 SPN23F_15430 SPN23F_15440     TRUE 0.649 43.000 0.000 NA   NA
 5831366 5831367 SPN23F_15440 SPN23F_15450     TRUE 0.879 11.000 0.000 NA   NA
 5831367 5831368 SPN23F_15450 SPN23F_15460     TRUE 0.834 18.000 0.000 NA   NA
 5831368 5831369 SPN23F_15460 SPN23F_15470     TRUE 0.180 139.000 0.000 0.001   NA
 5831369 5831370 SPN23F_15470 SPN23F_15490     TRUE 0.439 203.000 0.567 NA   NA
 5831370 5831371 SPN23F_15490 SPN23F_15500     TRUE 0.978 13.000 0.267 NA   NA
 5831371 5831372 SPN23F_15500 SPN23F_15510     TRUE 0.933 -10.000 0.000 NA   NA
 5831372 5831373 SPN23F_15510 SPN23F_15520     FALSE 0.069 204.000 0.000 NA   NA
 5831373 5831374 SPN23F_15520 SPN23F_15530     TRUE 0.924 -19.000 0.000 NA   NA
 5831374 5831375 SPN23F_15530 SPN23F_15540     TRUE 0.337 72.000 0.000 NA   NA
 5831375 5831376 SPN23F_15540 SPN23F_15550     TRUE 0.938 -3.000 0.000 NA   NA
 5831376 5831377 SPN23F_15550 SPN23F_15560     TRUE 0.474 60.000 0.000 NA   NA
 5831377 5831378 SPN23F_15560 SPN23F_15570     TRUE 0.474 60.000 0.000 NA   NA
 5831378 5831379 SPN23F_15570 SPN23F_15580     TRUE 0.935 0.000 0.000 NA   NA
 5831379 5831380 SPN23F_15580 SPN23F_15590     TRUE 0.935 0.000 0.000 NA   NA
 5831380 5831381 SPN23F_15590 SPN23F_15600     TRUE 0.926 2.000 0.000 NA   NA
 5831381 5831382 SPN23F_15600 SPN23F_15610     TRUE 0.617 49.000 0.000 NA   NA
 5831382 5831383 SPN23F_15610 SPN23F_15620     TRUE 0.926 2.000 0.000 NA   NA
 5831383 5831384 SPN23F_15620 SPN23F_15630     TRUE 0.879 11.000 0.000 NA   NA
 5831384 5831385 SPN23F_15630 SPN23F_15640     TRUE 0.843 17.000 0.000 NA   NA
 5831385 5831386 SPN23F_15640 SPN23F_15650     TRUE 0.994 2.000 0.708 NA   NA
 5831386 5831387 SPN23F_15650 SPN23F_15660     TRUE 0.552 54.000 0.000 NA   NA
 5831387 5831388 SPN23F_15660 SPN23F_15670     TRUE 0.705 35.000 0.000 NA   NA
 5831388 5831389 SPN23F_15670 SPN23F_15680   ssb TRUE 0.635 74.000 0.000 1.000 Y NA
 5831389 5831390 SPN23F_15680 SPN23F_15700 ssb   FALSE 0.072 188.000 0.000 NA   NA
 5831390 5831391 SPN23F_15700 SPN23F_15710   ssb1 TRUE 0.974 3.000 0.085 NA   NA
 5831391 5831392 SPN23F_15710 SPN23F_15720 ssb1   TRUE 0.901 6.000 0.000 NA   NA
 5831392 5831393 SPN23F_15720 SPN23F_15730     TRUE 0.579 52.000 0.000 NA   NA
 5831393 5831394 SPN23F_15730 SPN23F_15740     TRUE 0.268 81.000 0.000 NA   NA
 5831394 5831395 SPN23F_15740 SPN23F_15750     FALSE 0.066 232.000 0.000 NA   NA
 5831395 5831396 SPN23F_15750 SPN23F_15760     FALSE 0.074 178.000 0.000 NA   NA
 5831397 5831398 SPN23F_15770 SPN23F_15780     TRUE 0.792 22.000 0.000 NA   NA
 5831398 5831399 SPN23F_15780 SPN23F_15790     TRUE 0.868 14.000 0.000 NA   NA
 5831399 5831400 SPN23F_15790 SPN23F_15800     FALSE 0.124 119.000 0.000 1.000   NA
 5831401 5831402 SPN23F_15810 SPN23F_15820     TRUE 0.993 -3.000 0.470 NA   NA
 5831402 5831403 SPN23F_15820 SPN23F_15830     TRUE 0.988 -3.000 0.214 NA   NA
 5831403 5831404 SPN23F_15830 SPN23F_15840     TRUE 0.789 52.000 0.051 NA   NA
 5831404 5831405 SPN23F_15840 SPN23F_15850   engB TRUE 0.909 11.000 0.002 NA   NA
 5831405 5831406 SPN23F_15850 SPN23F_15860 engB clpX TRUE 0.957 9.000 0.043 1.000   NA
 5831406 5831407 SPN23F_15860 SPN23F_15870 clpX   TRUE 0.821 32.000 0.012 NA   NA
 5831407 5831408 SPN23F_15870 SPN23F_15880   dyr TRUE 0.970 0.000 0.030 NA   NA
 5831408 5831409 SPN23F_15880 SPN23F_15890 dyr dpr FALSE 0.128 130.000 0.005 1.000 N NA
 5831409 5831410 SPN23F_15890 SPN23F_15900 dpr   FALSE 0.072 498.000 0.000 1.000   NA
 5831410 5831411 SPN23F_15900 SPN23F_15910   tpi TRUE 0.367 71.000 0.000 1.000   NA
 5831411 5831412 SPN23F_15910 SPN23F_15920 tpi   TRUE 0.213 98.000 0.007 NA N NA
 5831412 5831413 SPN23F_15920 SPN23F_15930   metA TRUE 0.936 9.000 0.021 NA N NA
 5831413 5831414 SPN23F_15930 SPN23F_15940 metA apt FALSE 0.104 182.000 0.009 1.000 N NA
 5831414 5831415 SPN23F_15940 SPN23F_15950 apt   TRUE 0.246 88.000 0.002 1.000 N NA
 5831417 5831418 SPN23F_15970 SPN23F_t10 msmK tRNA-Leu FALSE 0.064 283.000 0.000 NA   NA
 5831418 5831419 SPN23F_t10 SPN23F_15990 tRNA-Leu   TRUE 0.262 82.000 0.000 NA   NA
 5831419 5831420 SPN23F_15990 SPN23F_16000   codY TRUE 0.978 0.000 0.083 1.000 N NA
 5831420 5831421 SPN23F_16000 SPN23F_16010 codY   TRUE 0.202 265.000 0.000 1.000 Y NA
 5831421 5831422 SPN23F_16010 SPN23F_16020     FALSE 0.057 199.000 0.000 NA N NA
 5831423 5831424 SPN23F_16030 SPN23F_16040     TRUE 0.229 99.000 0.010 1.000 N NA
 5831424 5831425 SPN23F_16040 SPN23F_16050     TRUE 0.995 0.000 0.796 1.000   NA
 5831425 5831426 SPN23F_16050 SPN23F_16060   pepQ FALSE 0.110 126.000 0.000 1.000   NA
 5831426 5831427 SPN23F_16060 SPN23F_16070 pepQ   TRUE 0.941 -7.000 0.000 1.000   NA
 5831428 5831429 SPN23F_16080 SPN23F_16090     TRUE 0.917 3.000 0.000 NA   NA
 5831429 5831430 SPN23F_16090 SPN23F_16100     FALSE 0.066 227.000 0.000 NA   NA
 5831430 5831431 SPN23F_16100 SPN23F_16110   thiD TRUE 0.987 -22.000 0.276 NA   NA
 5831431 5831432 SPN23F_16110 SPN23F_16120 thiD truA TRUE 0.973 -10.000 0.058 1.000 N NA
 5831432 5831433 SPN23F_16120 SPN23F_16140 truA   FALSE 0.109 313.000 0.009 1.000   NA
 5831433 5831434 SPN23F_16140 SPN23F_16150     FALSE 0.065 240.000 0.000 NA   NA
 5831434 5831435 SPN23F_16150 SPN23F_16160     TRUE 0.951 3.000 0.011 NA   NA
 5831435 5831436 SPN23F_16160 SPN23F_16170   cmk FALSE 0.115 131.000 0.002 1.000 N NA
 5831436 5831437 SPN23F_16170 SPN23F_16180 cmk   TRUE 0.936 9.000 0.012 NA   NA
 5831439 5831440 SPN23F_16200 SPN23F_16210   galE TRUE 0.988 2.000 0.030 NA Y NA
 5831440 5831441 SPN23F_16210 SPN23F_16220 galE   FALSE 0.152 103.000 0.000 NA   NA
 5831441 5831442 SPN23F_16220 SPN23F_16230     TRUE 0.361 70.000 0.000 NA   NA
 5831442 5831443 SPN23F_16230 SPN23F_16240     TRUE 0.918 17.000 0.021 NA   NA
 5831443 5831444 SPN23F_16240 SPN23F_16250     TRUE 0.989 -13.000 0.283 NA   NA
 5831444 5831445 SPN23F_16250 SPN23F_16260     FALSE 0.154 102.000 0.000 NA   NA
 5831447 5831448 SPN23F_16280 SPN23F_16290 cadD rpsO FALSE 0.056 815.000 0.000 NA N NA
 5831448 5831449 SPN23F_16290 SPN23F_16300 rpsO   FALSE 0.095 141.000 0.000 1.000   NA
 5831450 5831451 SPN23F_16310 SPN23F_s16     FALSE 0.069 206.000 0.000 NA   NA
 5831451 5831452 SPN23F_s16 SPN23F_16320     TRUE 0.899 7.000 0.000 NA   NA
 5831452 5831453 SPN23F_16320 SPN23F_16330   thrS TRUE 0.672 58.000 0.018 NA   NA
 5831454 5831455 SPN23F_16340 SPN23F_16350     TRUE 0.998 -7.000 0.812 1.000 Y NA
 5831457 5831458 SPN23F_16370 SPN23F_16380     TRUE 0.840 76.000 0.667 NA   NA
 5831459 5831460 SPN23F_16390 SPN23F_16410 scaR   FALSE 0.076 197.000 0.000 1.000   NA
 5831460 5831461 SPN23F_16410 SPN23F_16420     FALSE 0.097 131.000 0.000 NA   NA
 5831461 5831462 SPN23F_16420 SPN23F_16430     TRUE 0.822 19.000 0.000 NA   NA
 5831463 5831464 SPN23F_16450 SPN23F_16460   relA TRUE 0.923 30.000 0.177 1.000 N NA
 5831467 5831468 SPN23F_16500 SPN23F_16510 mtsB mtsC TRUE 0.992 -3.000 0.043 1.000 Y NA
 5831468 5831469 SPN23F_16510 SPN23F_16520 mtsC mtsA TRUE 0.951 32.000 0.038 1.000 Y NA
 5831469 5831470 SPN23F_16520 SPN23F_16530 mtsA tpx FALSE 0.148 123.000 0.007 1.000 N NA
 5831471 5831472 SPN23F_16540 SPN23F_16550     TRUE 0.990 2.000 0.438 1.000 N NA
 5831472 5831473 SPN23F_16550 SPN23F_16560     FALSE 0.070 250.000 0.000 1.000   NA
 5831473 5831474 SPN23F_16560 SPN23F_16570   gpmA TRUE 0.682 53.000 0.006 1.000   NA
 5831474 5831475 SPN23F_16570 SPN23F_16580 gpmA   TRUE 0.595 51.000 0.000 NA   NA
 5831475 5831476 SPN23F_16580 SPN23F_16590     FALSE 0.064 296.000 0.000 NA   NA
 5831476 5831477 SPN23F_16590 SPN23F_16600   ileS FALSE 0.066 403.000 0.000 NA   NA
 5831477 5831478 SPN23F_16600 SPN23F_s17 ileS   TRUE 0.843 17.000 0.000 NA   NA
 5831478 5831479 SPN23F_s17 SPN23F_16620     FALSE 0.149 104.000 0.000 NA   NA
 5831479 5831480 SPN23F_16620 SPN23F_16630     TRUE 0.989 9.000 0.579 NA   NA
 5831480 5831481 SPN23F_16630 SPN23F_16640     TRUE 0.991 -3.000 0.287 1.000   NA
 5831481 5831482 SPN23F_16640 SPN23F_16650     TRUE 0.991 0.000 0.370 NA   NA
 5831482 5831483 SPN23F_16650 SPN23F_16660     TRUE 0.975 10.000 0.194 NA   NA
 5831483 5831484 SPN23F_16660 SPN23F_16670   ftsZ TRUE 0.956 5.000 0.030 NA   NA
 5831484 5831485 SPN23F_16670 SPN23F_16680 ftsZ ftsA TRUE 0.992 17.000 0.460 1.000 Y NA
 5831485 5831486 SPN23F_16680 SPN23F_16690 ftsA   FALSE 0.067 219.000 0.000 NA   NA
 5831486 5831487 SPN23F_16690 SPN23F_16700     TRUE 0.322 91.000 0.016 NA   NA
 5831487 5831488 SPN23F_16700 SPN23F_16710   murF TRUE 0.958 -13.000 0.016 1.000 N NA
 5831488 5831489 SPN23F_16710 SPN23F_16720 murF ddlA TRUE 0.795 84.000 0.046 0.007 Y NA
 5831489 5831490 SPN23F_16720 SPN23F_16730 ddlA recR FALSE 0.110 176.000 0.010 1.000 N NA
 5831490 5831491 SPN23F_16730 SPN23F_16740 recR penA TRUE 0.922 11.000 0.013 1.000 N NA
 5831493 5831494 SPN23F_16760 SPN23F_16770   nanH TRUE 0.928 18.000 0.054 1.000 N NA
 5831494 5831495 SPN23F_16770 SPN23F_16780 nanH   TRUE 0.372 169.000 0.333 NA   NA
 5831495 5831496 SPN23F_16780 SPN23F_16790     FALSE 0.064 287.000 0.000 NA   NA
 5831496 5831497 SPN23F_16790 SPN23F_16800     FALSE 0.171 97.000 0.000 NA   NA
 5831497 5831498 SPN23F_16800 SPN23F_16810     TRUE 0.523 272.000 0.250 NA Y NA
 5831498 5831499 SPN23F_16810 SPN23F_16820     TRUE 0.997 16.000 1.000 0.037 Y NA
 5831499 5831500 SPN23F_16820 SPN23F_16830     TRUE 0.273 223.000 0.000 0.037 Y NA
 5831500 5831501 SPN23F_16830 SPN23F_16840     TRUE 0.303 125.000 0.000 1.000 Y NA
 5831501 5831502 SPN23F_16840 SPN23F_16850     TRUE 0.982 19.000 0.132 1.000 Y NA
 5831502 5831503 SPN23F_16850 SPN23F_16860     FALSE 0.080 174.000 0.000 1.000   NA
 5831503 5831504 SPN23F_16860 SPN23F_16870   nanB TRUE 0.980 12.000 0.273 1.000   NA
 5831504 5831505 SPN23F_16870 SPN23F_16880 nanB   TRUE 0.949 18.000 0.000 1.000 Y NA
 5831505 5831506 SPN23F_16880 SPN23F_16890     TRUE 0.997 0.000 0.300 0.037 Y NA
 5831506 5831507 SPN23F_16890 SPN23F_16900     TRUE 0.877 79.000 0.180 0.037 Y NA
 5831507 5831508 SPN23F_16900 SPN23F_16910     TRUE 0.975 19.000 0.060 NA Y NA
 5831508 5831509 SPN23F_16910 SPN23F_16920   nanA TRUE 0.209 1014.000 0.000 NA Y NA
 5831509 5831510 SPN23F_16920 SPN23F_16930 nanA   FALSE 0.064 288.000 0.000 NA   NA
 5831510 5831511 SPN23F_16930 SPN23F_16950     FALSE 0.070 1030.000 0.000 NA   NA
 5831511 5831512 SPN23F_16950 SPN23F_16960   recG FALSE 0.056 317.000 0.000 1.000 N NA
 5831512 5831513 SPN23F_16960 SPN23F_16970 recG alr TRUE 0.932 19.000 0.078 1.000 N NA
 5831513 5831514 SPN23F_16970 SPN23F_16980 alr acpS TRUE 0.978 -10.000 0.093 1.000 N NA
 5831514 5831515 SPN23F_16980 SPN23F_16990 acpS aroF TRUE 0.706 45.000 0.007 1.000 N NA
 5831515 5831516 SPN23F_16990 SPN23F_17000 aroF aroF1 TRUE 0.999 2.000 0.750 0.001 Y NA
 5831516 5831517 SPN23F_17000 SPN23F_17010 aroF1 secA TRUE 0.418 81.000 0.025 1.000 N NA
 5831517 5831518 SPN23F_17010 SPN23F_17020 secA   FALSE 0.154 146.000 0.017 NA   NA
 5831518 5831519 SPN23F_17020 SPN23F_17030     TRUE 0.744 28.000 0.000 NA   NA
 5831519 5831520 SPN23F_17030 SPN23F_17040     TRUE 0.911 4.000 0.000 NA   NA
 5831520 5831521 SPN23F_17040 SPN23F_17050     TRUE 0.936 -7.000 0.000 NA   NA
 5831521 5831522 SPN23F_17050 SPN23F_17060     TRUE 0.978 22.000 0.667 NA   NA
 5831524 5831525 SPN23F_17080 SPN23F_17090     FALSE 0.089 140.000 0.000 NA   NA
 5831525 5831526 SPN23F_17090 SPN23F_17100   engA TRUE 0.263 88.000 0.002 NA   NA
 5831526 5831527 SPN23F_17100 SPN23F_17110 engA nfsA TRUE 0.914 14.000 0.005 1.000   NA
 5831527 5831528 SPN23F_17110 SPN23F_17120 nfsA dnaI TRUE 0.973 -3.000 0.048 1.000 N NA
 5831528 5831529 SPN23F_17120 SPN23F_17130 dnaI dnaB TRUE 0.998 1.000 0.817 NA Y NA
 5831529 5831530 SPN23F_17130 SPN23F_17140 dnaB   TRUE 0.978 1.000 0.109 NA N NA
 5831531 5831532 SPN23F_17150 SPN23F_17160     TRUE 0.986 5.000 0.412 1.000 N NA
 5831532 5831533 SPN23F_17160 SPN23F_17170     TRUE 0.980 17.000 0.471 NA   NA
 5831534 5831535 SPN23F_17180 SPN23F_17190     TRUE 0.978 -3.000 0.059 NA   NA
 5831537 5831538 SPN23F_17220 SPN23F_17230 scrK scrA TRUE 0.595 149.000 0.235 1.000 Y NA
 5831539 5831540 SPN23F_17250 SPN23F_17260 scrB scrR TRUE 0.992 -19.000 0.571 1.000 N NA
 5831541 5831542 SPN23F_17270 SPN23F_17280 mvaA mvaS TRUE 0.995 0.000 0.183 1.000 Y NA
 5831542 5831543 SPN23F_17280 SPN23F_17290 mvaS   FALSE 0.097 131.000 0.000 NA   NA
 5831543 5831544 SPN23F_17290 SPN23F_17300     TRUE 0.385 68.000 0.000 NA   NA
 5831544 5831545 SPN23F_17300 SPN23F_17330     TRUE 0.424 65.000 0.000 NA   NA
 5831545 5831546 SPN23F_17330 SPN23F_17340     FALSE 0.124 116.000 0.000 NA   NA
 5831546 5831547 SPN23F_17340 SPN23F_17350   stk1 FALSE 0.127 115.000 0.000 NA   NA
 5831547 5831548 SPN23F_17350 SPN23F_17360 stk1   TRUE 0.998 -3.000 0.704 1.000 Y NA
 5831548 5831549 SPN23F_17360 SPN23F_17370     TRUE 0.947 15.000 0.074 1.000 N NA
 5831549 5831550 SPN23F_17370 SPN23F_17380   fmt TRUE 0.996 -7.000 0.305 1.000 Y NA
 5831550 5831551 SPN23F_17380 SPN23F_17390 fmt priA TRUE 0.946 13.000 0.052 1.000 N NA
 5831551 5831552 SPN23F_17390 SPN23F_17400 priA rpoZ TRUE 0.674 66.000 0.032 0.054 N NA
 5831552 5831553 SPN23F_17400 SPN23F_17410 rpoZ gmk TRUE 0.964 25.000 0.471 1.000 N NA
 5831553 5831554 SPN23F_17410 SPN23F_17420 gmk   FALSE 0.166 130.000 0.010 1.000   NA
 5831554 5831555 SPN23F_17420 SPN23F_17430     TRUE 0.379 70.000 0.000 1.000   NA
 5831555 5831556 SPN23F_17430 SPN23F_17440     FALSE 0.110 123.000 0.000 NA   NA
 5831556 5831557 SPN23F_17440 SPN23F_17450     TRUE 0.852 16.000 0.000 NA   NA
 5831557 5831558 SPN23F_17450 SPN23F_17460     FALSE 0.082 152.000 0.000 NA   NA
 5831558 5831559 SPN23F_17460 SPN23F_17470     FALSE 0.065 352.000 0.000 NA   NA
 5831559 5831560 SPN23F_17470 SPN23F_17490     FALSE 0.107 124.000 0.000 NA   NA
 5831560 5831561 SPN23F_17490 SPN23F_17500     TRUE 0.964 10.000 0.094 NA   NA
 5831561 5831562 SPN23F_17500 SPN23F_17510     TRUE 0.190 320.000 0.085 NA   NA
 5831562 5831563 SPN23F_17510 SPN23F_17520     TRUE 0.919 13.000 0.008 NA   NA
 5831563 5831564 SPN23F_17520 SPN23F_17530     TRUE 0.963 1.000 0.024 1.000 N NA
 5831564 5831565 SPN23F_17530 SPN23F_17540     TRUE 0.995 0.000 0.199 1.000 Y NA
 5831565 5831566 SPN23F_17540 SPN23F_17550     TRUE 0.840 52.000 0.150 NA N NA
 5831566 5831567 SPN23F_17550 SPN23F_17560     TRUE 0.191 200.000 0.068 NA   NA
 5831567 5831568 SPN23F_17560 SPN23F_17570     TRUE 0.991 3.000 0.555 NA   NA
 5831568 5831569 SPN23F_17570 SPN23F_17580     TRUE 0.921 15.000 0.015 NA   NA
 5831569 5831570 SPN23F_17580 SPN23F_17590     TRUE 0.823 57.000 0.059 0.068   NA
 5831571 5831572 SPN23F_17600 SPN23F_17610     TRUE 0.971 -3.000 0.026 NA   NA
 5831572 5831573 SPN23F_17610 SPN23F_17620     TRUE 0.536 68.000 0.013 NA   NA
 5831574 5831575 SPN23F_17630 SPN23F_17640     TRUE 0.461 61.000 0.000 NA   NA
 5831575 5831576 SPN23F_17640 SPN23F_17650     TRUE 0.994 5.000 1.000 NA   NA
 5831576 5831577 SPN23F_17650 SPN23F_17660     TRUE 0.990 2.000 0.400 NA   NA
 5831577 5831578 SPN23F_17660 SPN23F_17670     TRUE 0.992 -7.000 0.400 NA   NA
 5831578 5831579 SPN23F_17670 SPN23F_17680     TRUE 0.982 12.000 0.429 1.000 N NA
 5831579 5831580 SPN23F_17680 SPN23F_17690     TRUE 0.994 -7.000 0.571 NA   NA
 5831580 5831581 SPN23F_17690 SPN23F_17700     TRUE 0.995 -3.000 0.800 NA   NA
 5831581 5831582 SPN23F_17700 SPN23F_17710     TRUE 0.993 -16.000 0.571 NA   NA
 5831582 5831583 SPN23F_17710 SPN23F_17720     TRUE 0.924 10.000 0.007 NA   NA
 5831583 5831584 SPN23F_17720 SPN23F_17730     TRUE 0.540 57.000 0.002 NA N NA
 5831584 5831585 SPN23F_17730 SPN23F_17740     TRUE 0.997 0.000 0.500 NA Y NA
 5831585 5831586 SPN23F_17740 SPN23F_17750     TRUE 0.998 9.000 0.750 0.003 Y NA
 5831586 5831587 SPN23F_17750 SPN23F_17760     TRUE 0.919 25.000 0.000 NA Y NA
 5831587 5831588 SPN23F_17760 SPN23F_17770     TRUE 0.981 -3.000 0.000 NA Y NA
 5831588 5831589 SPN23F_17770 SPN23F_17780     TRUE 0.606 83.000 0.154 NA   NA
 5831589 5831590 SPN23F_17780 SPN23F_17790     TRUE 0.737 29.000 0.000 NA   NA
 5831590 5831591 SPN23F_17790 SPN23F_17800     FALSE 0.064 291.000 0.000 NA   NA
 5831591 5831592 SPN23F_17800 SPN23F_17810     TRUE 0.298 307.000 0.000 0.003 Y NA
 5831592 5831593 SPN23F_17810 SPN23F_17820   psrP TRUE 0.481 61.000 0.000 1.000   NA
 5831593 5831594 SPN23F_17820 SPN23F_17840 psrP   FALSE 0.065 372.000 0.000 NA   NA
 5831595 5831596 SPN23F_17850 SPN23F_17860     TRUE 0.456 99.000 0.143 NA   NA
 5831596 5831597 SPN23F_17860 SPN23F_17870     TRUE 0.976 17.000 0.364 NA   NA
 5831597 5831598 SPN23F_17870 SPN23F_17880     FALSE 0.069 307.000 0.000 1.000   NA
 5831598 5831599 SPN23F_17880 SPN23F_17890     TRUE 0.448 62.000 0.000 NA   NA
 5831600 5831601 SPN23F_17900 SPN23F_17910 aqpZ   TRUE 0.216 111.000 0.010 NA   NA
 5831601 5831602 SPN23F_17910 SPN23F_17920     TRUE 0.385 68.000 0.000 NA   NA
 5831602 5831603 SPN23F_17920 SPN23F_17930     TRUE 0.773 24.000 0.000 NA   NA
 5831603 5831604 SPN23F_17930 SPN23F_17940     TRUE 0.915 11.000 0.004 NA   NA
 5831604 5831605 SPN23F_17940 SPN23F_17950     TRUE 0.986 2.000 0.227 NA   NA
 5831605 5831606 SPN23F_17950 SPN23F_17960     TRUE 0.861 15.000 0.000 NA   NA
 5831606 5831607 SPN23F_17960 SPN23F_17970     TRUE 0.595 51.000 0.000 NA   NA
 5831607 5831608 SPN23F_17970 SPN23F_17980     TRUE 0.530 101.000 0.231 1.000   NA
 5831608 5831609 SPN23F_17980 SPN23F_18000     FALSE 0.070 249.000 0.000 1.000   NA
 5831609 5831610 SPN23F_18000 SPN23F_18010     TRUE 0.822 19.000 0.000 NA   NA
 5831610 5831611 SPN23F_18010 SPN23F_18020     FALSE 0.064 291.000 0.000 NA   NA
 5831611 5831612 SPN23F_18020 SPN23F_18030     FALSE 0.065 353.000 0.000 NA   NA
 5831612 5831613 SPN23F_18030 SPN23F_18040     FALSE 0.077 165.000 0.000 NA   NA
 5831614 5831615 SPN23F_18050 SPN23F_t11   tRNA-Lys FALSE 0.064 265.000 0.000 NA   NA
 5831616 5831617 SPN23F_18060 SPN23F_18070     TRUE 0.990 10.000 0.182 1.000 Y NA
 5831617 5831618 SPN23F_18070 SPN23F_18080     TRUE 0.992 29.000 0.733 0.037 Y NA
 5831618 5831619 SPN23F_18080 SPN23F_18090     TRUE 0.998 11.000 0.933 0.037 Y NA
 5831619 5831620 SPN23F_18090 SPN23F_18100     TRUE 0.310 151.000 0.214 1.000 N NA
 5831620 5831621 SPN23F_18100 SPN23F_18110     FALSE 0.065 362.000 0.000 NA   NA
 5831622 5831623 SPN23F_18120 SPN23F_18130     TRUE 0.632 84.000 0.214 NA   NA
 5831623 5831624 SPN23F_18130 SPN23F_18140     TRUE 0.968 12.000 0.143 NA   NA
 5831624 5831625 SPN23F_18140 SPN23F_18150     TRUE 0.836 39.000 0.036 NA   NA
 5831625 5831626 SPN23F_18150 SPN23F_18160     TRUE 0.727 31.000 0.000 NA   NA
 5831627 5831628 SPN23F_18180 SPN23F_18190     TRUE 0.861 15.000 0.000 NA   NA
 5831628 5831629 SPN23F_18190 SPN23F_18200     TRUE 0.938 -3.000 0.000 NA   NA
 5831629 5831630 SPN23F_18200 SPN23F_18210     FALSE 0.056 323.000 0.000 1.000 N NA
 5831630 5831631 SPN23F_18210 SPN23F_18220     TRUE 0.997 10.000 0.500 0.015 Y NA
 5831631 5831632 SPN23F_18220 SPN23F_18230     TRUE 0.994 17.000 0.429 0.015 Y NA
 5831632 5831633 SPN23F_18230 SPN23F_18240     TRUE 0.870 15.000 0.000 1.000   NA
 5831633 5831634 SPN23F_18240 SPN23F_18250     TRUE 0.922 3.000 0.000 1.000   NA
 5831638 5831639 SPN23F_18290 SPN23F_18300     TRUE 0.968 15.000 0.182 NA   NA
 5831639 5831640 SPN23F_18300 SPN23F_18310   trpA FALSE 0.064 302.000 0.000 NA   NA
 5831640 5831641 SPN23F_18310 SPN23F_18320 trpA trpB TRUE 0.998 -7.000 0.248 0.001 Y NA
 5831641 5831642 SPN23F_18320 SPN23F_18330 trpB trpF TRUE 0.998 -22.000 0.375 0.002 Y NA
 5831642 5831643 SPN23F_18330 SPN23F_18340 trpF trpC TRUE 0.997 -13.000 0.264 0.002 Y NA
 5831643 5831644 SPN23F_18340 SPN23F_18350 trpC trpD TRUE 0.996 -3.000 0.216 1.000 Y NA
 5831644 5831645 SPN23F_18350 SPN23F_18360 trpD trpG TRUE 0.979 11.000 0.018 1.000 Y NA
 5831645 5831646 SPN23F_18360 SPN23F_18370 trpG trpE TRUE 0.998 -3.000 0.321 0.001 Y NA
 5831646 5831647 SPN23F_18370 SPN23F_s18 trpE   FALSE 0.069 715.000 0.000 NA   NA
 5831647 5831648 SPN23F_s18 SPN23F_18390     FALSE 0.066 225.000 0.000 NA   NA
 5831648 5831649 SPN23F_18390 SPN23F_18400     FALSE 0.142 108.000 0.000 NA   NA
 5831649 5831650 SPN23F_18400 SPN23F_18410     FALSE 0.176 96.000 0.000 NA   NA
 5831650 5831651 SPN23F_18410 SPN23F_18420     TRUE 0.947 3.000 0.000 0.067   NA
 5831651 5831652 SPN23F_18420 SPN23F_18430     TRUE 0.989 12.000 0.545 0.036 N NA
 5831652 5831653 SPN23F_18430 SPN23F_18440     TRUE 0.632 104.000 0.364 0.036 N NA
 5831653 5831654 SPN23F_18440 SPN23F_18450     TRUE 0.777 25.000 0.000 1.000   NA
 5831654 5831655 SPN23F_18450 SPN23F_18460   galE FALSE 0.073 210.000 0.000 1.000   NA
 5831655 5831656 SPN23F_18460 SPN23F_18470 galE   TRUE 0.925 13.000 0.000 0.003 N NA
 5831656 5831657 SPN23F_18470 SPN23F_18480     TRUE 0.848 13.000 0.000 NA N NA
 5831657 5831658 SPN23F_18480 SPN23F_18490     TRUE 0.508 58.000 0.000 NA   NA
 5831658 5831659 SPN23F_18490 SPN23F_18500     FALSE 0.081 154.000 0.000 NA   NA
 5831659 5831660 SPN23F_18500 SPN23F_18510     TRUE 0.927 -16.000 0.000 NA   NA
 5831660 5831661 SPN23F_18510 SPN23F_18530     TRUE 0.219 1164.000 0.000 1.000 Y NA
 5831661 5831662 SPN23F_18530 SPN23F_18540     TRUE 0.974 43.000 0.382 NA Y NA
 5831662 5831663 SPN23F_18540 SPN23F_18550     FALSE 0.120 173.000 0.018 NA N NA
 5831663 5831664 SPN23F_18550 SPN23F_18560     TRUE 0.999 -10.000 0.911 0.009 Y NA
 5831664 5831665 SPN23F_18560 SPN23F_18570     TRUE 0.183 128.000 0.018 NA   NA
 5831665 5831666 SPN23F_18570 SPN23F_18580     TRUE 0.337 72.000 0.000 NA   NA
 5831666 5831667 SPN23F_18580 SPN23F_18590     TRUE 0.608 50.000 0.000 NA   NA
 5831668 5831669 SPN23F_18600 SPN23F_18610 exoA   FALSE 0.081 155.000 0.000 NA   NA
 5831669 5831670 SPN23F_18610 SPN23F_s19     FALSE 0.065 383.000 0.000 NA   NA
 5831670 5831671 SPN23F_s19 SPN23F_18620   xpt FALSE 0.065 400.000 0.000 NA   NA
 5831671 5831672 SPN23F_18620 SPN23F_18630 xpt pbuX TRUE 0.991 0.000 0.046 1.000 Y NA
 5831675 5831676 SPN23F_18660 SPN23F_18670   galT TRUE 0.505 70.000 0.024 NA N NA
 5831676 5831677 SPN23F_18670 SPN23F_18680 galT galK TRUE 0.988 19.000 0.107 0.003 Y NA
 5831679 5831680 SPN23F_18700 SPN23F_18710     TRUE 0.922 1.000 0.000 1.000 N NA
 5831680 5831681 SPN23F_18710 SPN23F_18720     FALSE 0.057 244.000 0.000 1.000 N NA
 5831683 5831684 SPN23F_18740 SPN23F_18750     FALSE 0.087 345.000 0.000 0.051 N NA
 5831684 5831685 SPN23F_18750 SPN23F_18760     TRUE 0.991 -7.000 0.382 1.000 N NA
 5831685 5831686 SPN23F_18760 SPN23F_18770     TRUE 0.935 15.000 0.031 NA   NA
 5831686 5831687 SPN23F_18770 SPN23F_18780     TRUE 0.983 4.000 0.222 NA   NA
 5831687 5831688 SPN23F_18780 SPN23F_18790     FALSE 0.069 682.000 0.000 NA   NA
 5831688 5831689 SPN23F_18790 SPN23F_18800   pepA TRUE 0.933 22.000 0.100 NA   NA
 5831690 5831691 SPN23F_18810 SPN23F_18820     FALSE 0.058 423.000 0.000 1.000 N NA
 5831691 5831692 SPN23F_18820 SPN23F_18830     TRUE 0.999 -10.000 0.870 0.036 Y NA
 5831692 5831693 SPN23F_18830 SPN23F_18840     TRUE 0.998 -3.000 0.870 1.000 Y NA
 5831693 5831694 SPN23F_18840 SPN23F_18850     TRUE 0.643 96.000 0.055 1.000 Y NA
 5831695 5831696 SPN23F_18860 SPN23F_18870   rluB TRUE 0.964 0.000 0.014 NA   NA
 5831696 5831697 SPN23F_18870 SPN23F_18880 rluB scpB TRUE 0.985 -13.000 0.224 NA N NA
 5831697 5831698 SPN23F_18880 SPN23F_18890 scpB scpA TRUE 0.980 19.000 0.570 NA   NA
 5831698 5831699 SPN23F_18890 SPN23F_18900 scpA xerD TRUE 0.952 0.000 0.003 NA   NA
 5831699 5831700 SPN23F_18900 SPN23F_18910 xerD   TRUE 0.969 -3.000 0.017 1.000   NA
 5831700 5831701 SPN23F_18910 SPN23F_18920     TRUE 0.979 -3.000 0.065 NA   NA
 5831701 5831702 SPN23F_18920 SPN23F_18930     TRUE 0.976 -24.000 0.085 NA   NA
 5831702 5831703 SPN23F_18930 SPN23F_18940   glr TRUE 0.970 -3.000 0.034 1.000 N NA
 5831703 5831704 SPN23F_18940 SPN23F_18950 glr   FALSE 0.122 207.000 0.014 NA   NA
 5831704 5831705 SPN23F_18950 SPN23F_18960   treA FALSE 0.064 256.000 0.000 NA   NA
 5831705 5831706 SPN23F_18960 SPN23F_18970 treA   TRUE 0.710 178.000 0.650 1.000 Y NA
 5831708 5831709 SPN23F_18990 SPN23F_19000     TRUE 0.969 13.000 0.143 1.000   NA
 5831709 5831710 SPN23F_19000 SPN23F_19010     TRUE 0.878 12.000 0.000 NA   NA
 5831710 5831711 SPN23F_19010 SPN23F_19050     FALSE 0.067 485.000 0.000 NA   NA
 5831711 5831712 SPN23F_19050 SPN23F_19060     TRUE 0.996 11.000 0.333 0.001 Y NA
 5831712 5831713 SPN23F_19060 SPN23F_19070     TRUE 0.996 9.000 0.650 1.000 Y NA
 5831713 5831714 SPN23F_19070 SPN23F_19080     TRUE 0.993 0.000 0.278 0.036   NA
 5831714 5831715 SPN23F_19080 SPN23F_19090     TRUE 0.852 16.000 0.000 NA   NA
 5831715 5831716 SPN23F_19090 SPN23F_19100     TRUE 0.880 67.000 0.600 NA   NA
 5831716 5831717 SPN23F_19100 SPN23F_19110     FALSE 0.056 686.000 0.000 NA N NA
 5831717 5831718 SPN23F_19110 SPN23F_19120     FALSE 0.075 138.000 0.000 NA N NA
 5831718 5831719 SPN23F_19120 SPN23F_19140   msmG TRUE 0.359 358.000 0.050 1.000 Y NA
 5831719 5831720 SPN23F_19140 SPN23F_19150 msmG msmF TRUE 0.997 14.000 0.925 0.036 Y NA
 5831720 5831721 SPN23F_19150 SPN23F_19160 msmF msmE TRUE 0.994 14.000 0.275 0.036 Y NA
 5831721 5831722 SPN23F_19160 SPN23F_19170 msmE aga TRUE 0.813 92.000 0.286 1.000 Y NA
 5831723 5831724 SPN23F_19180 SPN23F_19190 msmR birA TRUE 0.929 -3.000 0.000 1.000 N NA
 5831724 5831725 SPN23F_19190 SPN23F_19200 birA   FALSE 0.085 146.000 0.000 NA   NA
 5831726 5831727 SPN23F_t12 SPN23F_t13 tRNA-Ser tRNA-Ile TRUE 0.899 7.000 0.000 NA   NA
 5831727 5831728 SPN23F_t13 SPN23F_t14 tRNA-Ile tRNA-Gly TRUE 0.699 36.000 0.000 NA   NA
 5831728