MicrobesOnline Operon Predictions for Haemophilus parasuis SH0165

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 5822953 5822954 HAPS_0001 HAPS_0002 gapA gyrA FALSE 0.014 946.000 0.000 1.000 N NA
 5822955 5822956 HAPS_0003 HAPS_0004 sclB1   FALSE 0.125 150.000 0.000 NA   NA
 5822957 5822958 HAPS_0005 HAPS_0006 frdA frdB TRUE 0.998 7.000 0.470 0.003 Y NA
 5822958 5822959 HAPS_0006 HAPS_0007 frdB frdC TRUE 0.997 13.000 0.454 0.003 Y NA
 5822959 5822960 HAPS_0007 HAPS_0008 frdC frdD TRUE 0.999 11.000 0.787 0.003 Y NA
 5822962 5822963 HAPS_0010 HAPS_0011 zipA ligA TRUE 0.875 64.000 0.106 1.000 N NA
 5822964 5822965 HAPS_0012 HAPS_0013 recQ cyaY TRUE 0.987 0.000 0.030 NA N NA
 5822965 5822966 HAPS_0013 HAPS_0014 cyaY lexA TRUE 0.320 83.000 0.000 NA N NA
 5822966 5822967 HAPS_0014 HAPS_0015 lexA pykF FALSE 0.061 194.000 0.000 1.000   NA
 5822967 5822968 HAPS_0015 HAPS_0016 pykF   TRUE 0.939 4.000 0.000 NA   NA
 5822968 5822969 HAPS_0016 HAPS_0017     TRUE 0.941 2.000 0.000 NA   NA
 5822970 5822971 HAPS_0018 HAPS_0019 plsB apt FALSE 0.079 194.000 0.000 1.000 N NA
 5822971 5822972 HAPS_0019 HAPS_0020 apt dnaX TRUE 0.856 65.000 0.088 1.000 N NA
 5822972 5822973 HAPS_0020 HAPS_0021 dnaX   TRUE 0.976 6.000 0.005 1.000 N NA
 5822973 5822974 HAPS_0021 HAPS_0022     TRUE 0.996 22.000 0.688 1.000 N NA
 5822974 5822975 HAPS_0022 HAPS_0023   stbD FALSE 0.233 90.000 0.000 NA   NA
 5822975 5822976 HAPS_0023 HAPS_0024 stbD stbE TRUE 0.986 -3.000 0.074 NA   NA
 5822976 5822977 HAPS_0024 HAPS_0025 stbE sbcB FALSE 0.027 387.000 0.000 NA N NA
 5822977 5822978 HAPS_0025 HAPS_0026 sbcB   FALSE 0.268 83.000 0.000 NA   NA
 5822978 5822979 HAPS_0026 HAPS_0027   trpH FALSE 0.126 149.000 0.000 NA   NA
 5822980 5822981 HAPS_0028 HAPS_0029 ilvH ilvI TRUE 0.995 -7.000 0.371 0.003 Y NA
 5822983 5822984 HAPS_0031 HAPS_0032 acrB acrA TRUE 0.999 12.000 0.900 NA N NA
 5822984 5822985 HAPS_0032 HAPS_0033 acrA acrR TRUE 0.978 23.000 0.138 1.000 N NA
 5822987 5822988 HAPS_0035 HAPS_0036 metC ogt TRUE 0.899 -3.000 0.000 1.000 N NA
 5822988 5822989 HAPS_0036 HAPS_0037 ogt ompP1 FALSE 0.076 386.000 0.012 1.000 N NA
 5822990 5822991 HAPS_0038 HAPS_0039 mutS   FALSE 0.105 164.000 0.000 NA   NA
 5822991 5822992 HAPS_0039 HAPS_0040   neuA FALSE 0.023 302.000 0.000 1.000   NA
 5822992 5822993 HAPS_0040 HAPS_0041 neuA lsgA TRUE 0.918 -13.000 0.013 1.000   NA
 5822993 5822994 HAPS_0041 HAPS_0042 lsgA lsgB TRUE 0.997 1.000 0.294 1.000   NA
 5822994 5822995 HAPS_0042 HAPS_0043 lsgB   TRUE 0.885 12.000 0.000 NA   NA
 5822995 5822996 HAPS_0043 HAPS_0044   wcwK FALSE 0.068 203.000 0.000 NA   NA
 5822996 5822997 HAPS_0044 HAPS_0045 wcwK wcfQ TRUE 0.973 18.000 0.061 NA   NA
 5822997 5822998 HAPS_0045 HAPS_0046 wcfQ wbgX TRUE 0.993 8.000 0.020 NA Y NA
 5822998 5822999 HAPS_0046 HAPS_0047 wbgX wbgY TRUE 0.998 14.000 0.382 NA Y NA
 5822999 5823000 HAPS_0047 HAPS_0048 wbgY capD FALSE 0.081 366.000 0.000 NA Y NA
 5823000 5823001 HAPS_0048 HAPS_0049 capD wza TRUE 0.684 264.000 0.333 1.000 Y NA
 5823001 5823002 HAPS_0049 HAPS_0050 wza ptp TRUE 0.994 4.000 0.111 1.000 N NA
 5823002 5823003 HAPS_0050 HAPS_0051 ptp wzs TRUE 0.997 19.000 0.700 1.000 N NA
 5823003 5823004 HAPS_0051 HAPS_0052 wzs   FALSE 0.060 235.000 0.000 NA N NA
 5823004 5823005 HAPS_0052 HAPS_0053   iscS TRUE 0.988 32.000 0.424 NA N NA
 5823005 5823006 HAPS_0053 HAPS_0054 iscS iscU TRUE 0.797 166.000 0.448 1.000 N NA
 5823006 5823007 HAPS_0054 HAPS_0055 iscU iscA TRUE 0.304 331.000 0.359 0.004   NA
 5823007 5823008 HAPS_0055 HAPS_0056 iscA hscB TRUE 0.997 10.000 0.500 1.000   NA
 5823008 5823009 HAPS_0056 HAPS_0057 hscB   FALSE 0.040 265.000 0.000 1.000 N NA
 5823009 5823010 HAPS_0057 HAPS_0058   hisS TRUE 0.583 47.000 0.000 NA   NA
 5823010 5823011 HAPS_0058 HAPS_0059 hisS hscA TRUE 0.312 175.000 0.019 NA   NA
 5823011 5823012 HAPS_0059 HAPS_0060 hscA fdx TRUE 0.740 276.000 0.794 1.000 N NA
 5823012 5823013 HAPS_0060 HAPS_0061 fdx iscX TRUE 0.998 0.000 0.625 1.000   NA
 5823014 5823015 HAPS_0062 HAPS_0063   luxS FALSE 0.175 115.000 0.000 NA   NA
 5823016 5823017 HAPS_0064 HAPS_0065 typA grxA TRUE 0.781 49.000 0.004 1.000 N NA
 5823019 5823020 HAPS_0067 HAPS_0068 cydA cydB TRUE 0.998 14.000 0.714 0.043 Y NA
 5823020 5823021 HAPS_0068 HAPS_0069 cydB   TRUE 0.570 112.000 0.040 NA   NA
 5823021 5823022 HAPS_0069 HAPS_0070   ybgC TRUE 0.504 170.000 0.095 NA   NA
 5823022 5823023 HAPS_0070 HAPS_0071 ybgC tolQ TRUE 0.993 25.000 0.593 1.000   NA
 5823023 5823024 HAPS_0071 HAPS_0072 tolQ tolR TRUE 0.978 66.000 0.556 0.065 Y NA
 5823024 5823025 HAPS_0072 HAPS_0073 tolR tolA TRUE 0.995 17.000 0.460 NA N NA
 5823025 5823026 HAPS_0073 HAPS_0074 tolA tolB TRUE 0.769 131.000 0.215 NA N NA
 5823026 5823027 HAPS_0074 HAPS_0075 tolB palA TRUE 0.995 19.000 0.592 1.000   NA
 5823027 5823028 HAPS_0075 HAPS_0076 palA djlA FALSE 0.108 146.000 0.000 1.000   NA
 5823028 5823029 HAPS_0076 HAPS_0077 djlA yjdF TRUE 0.981 0.000 0.015 NA   NA
 5823029 5823030 HAPS_0077 HAPS_0078 yjdF dusC TRUE 0.836 49.000 0.017 NA   NA
 5823030 5823031 HAPS_0078 HAPS_0079 dusC   TRUE 0.982 0.000 0.017 NA   NA
 5823031 5823032 HAPS_0079 HAPS_0080   truA FALSE 0.035 275.000 0.000 NA   NA
 5823032 5823033 HAPS_0080 HAPS_0081 truA cafA TRUE 0.541 69.000 0.000 0.035 Y NA
 5823033 5823034 HAPS_0081 HAPS_0082 cafA potD FALSE 0.117 159.000 0.000 1.000 N NA
 5823034 5823035 HAPS_0082 HAPS_0083 potD   FALSE 0.142 138.000 0.000 NA   NA
 5823035 5823036 HAPS_0083 HAPS_0084     TRUE 0.990 26.000 0.459 NA   NA
 5823036 5823037 HAPS_0084 HAPS_0085     TRUE 0.998 10.000 0.543 NA   NA
 5823037 5823038 HAPS_0085 HAPS_0086   ptsN TRUE 0.376 137.000 0.017 1.000   NA
 5823038 5823039 HAPS_0086 HAPS_0087 ptsN   TRUE 0.995 6.000 0.186 NA   NA
 5823039 5823040 HAPS_0087 HAPS_0088   visC TRUE 0.979 2.000 0.006 NA   NA
 5823040 5823041 HAPS_0088 HAPS_0089 visC hlpB TRUE 0.789 23.000 0.000 NA   NA
 5823041 5823042 HAPS_0089 HAPS_0090 hlpB cysS FALSE 0.254 85.000 0.000 NA   NA
 5823043 5823044 HAPS_0091 HAPS_0092 metE hbpA FALSE 0.143 137.000 0.000 NA   NA
 5823047 5823048 HAPS_0095 HAPS_0096 fhuC fhuA FALSE 0.046 241.000 0.000 NA   NA
 5823049 5823050 HAPS_0097 HAPS_0098 glgP   TRUE 0.722 160.000 0.286 NA   NA
 5823050 5823051 HAPS_0098 HAPS_0099   dsbB TRUE 0.921 9.000 0.000 NA   NA
 5823051 5823052 HAPS_0099 HAPS_0100 dsbB nhaB TRUE 0.864 14.000 0.000 NA   NA
 5823053 5823054 HAPS_0101 HAPS_0102 fadR apbE FALSE 0.077 196.000 0.000 1.000 N NA
 5823054 5823055 HAPS_0102 HAPS_0103 apbE   TRUE 0.987 12.000 0.113 NA   NA
 5823055 5823056 HAPS_0103 HAPS_0104     TRUE 0.762 25.000 0.000 NA   NA
 5823056 5823057 HAPS_0104 HAPS_0105     TRUE 0.986 -21.000 0.333 NA   NA
 5823057 5823058 HAPS_0105 HAPS_0106   trmU TRUE 0.912 0.000 0.000 1.000   NA
 5823059 5823060 HAPS_0107 HAPS_0108 dxs suhB TRUE 0.800 53.000 0.013 1.000 N NA
 5823061 5823062 HAPS_0109 HAPS_0110   mraZ FALSE 0.017 547.000 0.000 NA   NA
 5823062 5823063 HAPS_0110 HAPS_0111 mraZ mraW TRUE 0.996 19.000 0.635 NA   NA
 5823063 5823064 HAPS_0111 HAPS_0112 mraW ftsL TRUE 0.996 0.000 0.227 1.000 N NA
 5823064 5823065 HAPS_0112 HAPS_0113 ftsL ftsI TRUE 0.990 3.000 0.044 1.000 N NA
 5823065 5823066 HAPS_0113 HAPS_0114 ftsI murE TRUE 0.991 10.000 0.022 1.000 Y NA
 5823066 5823067 HAPS_0114 HAPS_0115 murE murF TRUE 0.913 145.000 0.569 0.005 Y NA
 5823067 5823068 HAPS_0115 HAPS_0116 murF mraY TRUE 0.997 11.000 0.309 0.008 Y NA
 5823068 5823069 HAPS_0116 HAPS_0117 mraY murD TRUE 0.940 123.000 0.647 0.008 Y NA
 5823069 5823070 HAPS_0117 HAPS_0118 murD ftsW TRUE 0.995 0.000 0.297 0.006 N NA
 5823070 5823071 HAPS_0118 HAPS_0119 ftsW murG TRUE 0.997 15.000 0.647 1.000 N NA
 5823071 5823072 HAPS_0119 HAPS_0120 murG murC TRUE 0.979 53.000 0.283 1.000 Y NA
 5823072 5823073 HAPS_0120 HAPS_0121 murC ddl TRUE 0.726 148.000 0.153 0.008 Y NA
 5823073 5823074 HAPS_0121 HAPS_0122 ddl ftsQ TRUE 0.999 0.000 0.372 NA Y NA
 5823074 5823075 HAPS_0122 HAPS_0123 ftsQ ftsA TRUE 0.990 27.000 0.389 NA N NA
 5823075 5823076 HAPS_0123 HAPS_0124 ftsA ftsZ TRUE 0.992 43.000 0.460 1.000 Y NA
 5823076 5823077 HAPS_0124 HAPS_0125 ftsZ lpxC TRUE 0.972 26.000 0.134 1.000 N NA
 5823077 5823078 HAPS_0125 HAPS_0126 lpxC sstT FALSE 0.085 190.000 0.000 1.000 N NA
 5823078 5823079 HAPS_0126 HAPS_0127 sstT lepA FALSE 0.037 273.000 0.000 1.000 N NA
 5823079 5823080 HAPS_0127 HAPS_0128 lepA   FALSE 0.042 259.000 0.000 1.000 N NA
 5823080 5823081 HAPS_0128 HAPS_0129   lepB FALSE 0.251 76.000 0.000 1.000   NA
 5823081 5823082 HAPS_0129 HAPS_0130 lepB rnc TRUE 0.617 133.000 0.117 1.000   NA
 5823082 5823083 HAPS_0130 HAPS_0131 rnc era TRUE 0.849 61.000 0.127 0.037   NA
 5823083 5823084 HAPS_0131 HAPS_0132 era recO TRUE 0.991 0.000 0.109 1.000   NA
 5823085 5823086 HAPS_0133 HAPS_0134   metX FALSE 0.044 251.000 0.000 1.000 N NA
 5823086 5823087 HAPS_0134 HAPS_0135 metX   FALSE 0.086 183.000 0.000 NA   NA
 5823090 5823091 HAPS_0138 HAPS_0139 frr   FALSE 0.135 144.000 0.000 NA   NA
 5823092 5823093 HAPS_0140 HAPS_0141   perM FALSE 0.040 257.000 0.000 NA   NA
 5823093 5823094 HAPS_0141 HAPS_0142 perM usg TRUE 0.321 73.000 0.000 NA   NA
 5823094 5823095 HAPS_0142 HAPS_0143 usg fxsA FALSE 0.111 143.000 0.000 1.000   NA
 5823096 5823097 HAPS_0144 HAPS_0145 ilvG ilvM TRUE 0.998 12.000 0.943 0.003   NA
 5823097 5823098 HAPS_0145 HAPS_0146 ilvM   TRUE 0.811 20.000 0.000 NA   NA
 5823099 5823100 HAPS_0147 HAPS_0148   sphB FALSE 0.122 152.000 0.000 NA   NA
 5823101 5823102 HAPS_0149 HAPS_0150 metG ndk TRUE 0.700 56.000 0.003 1.000 N NA
 5823103 5823104 HAPS_0151 HAPS_0152   nudE TRUE 0.775 -13.000 0.000 NA   NA
 5823104 5823105 HAPS_0152 HAPS_0153 nudE   TRUE 0.554 49.000 0.000 NA   NA
 5823106 5823107 HAPS_0154 HAPS_0155 focA pflB TRUE 0.790 94.000 0.172 1.000 N NA
 5823107 5823108 HAPS_0155 HAPS_0156 pflB pflA TRUE 0.405 142.000 0.018 1.000 N NA
 5823109 5823110 HAPS_0157 HAPS_0158     FALSE 0.058 213.000 0.000 NA   NA
 5823112 5823113 HAPS_0160 HAPS_0161 bioD   FALSE 0.089 180.000 0.000 NA   NA
 5823114 5823115 HAPS_0162 HAPS_0163 rplM rpsI TRUE 0.998 16.000 0.601 0.029 Y NA
 5823115 5823116 HAPS_0163 HAPS_0164 rpsI ompP2 FALSE 0.014 1115.000 0.000 1.000 N NA
 5823120 5823121 HAPS_0168 HAPS_0169   yecO FALSE 0.100 169.000 0.000 NA   NA
 5823121 5823122 HAPS_0169 HAPS_0170 yecO dnaB FALSE 0.118 135.000 0.000 1.000   NA
 5823122 5823123 HAPS_0170 HAPS_0171 dnaB   TRUE 0.986 2.000 0.020 NA   NA
 5823123 5823124 HAPS_0171 HAPS_0172   nrdR TRUE 0.972 0.000 0.004 NA   NA
 5823125 5823126 HAPS_0173 HAPS_0174     TRUE 0.939 24.000 0.021 NA   NA
 5823129 5823130 HAPS_0177 HAPS_0178   tdk FALSE 0.272 151.000 0.004 NA   NA
 5823130 5823131 HAPS_0178 HAPS_0179 tdk yniC FALSE 0.120 134.000 0.000 1.000   NA
 5823131 5823132 HAPS_0179 HAPS_0180 yniC polA FALSE 0.106 147.000 0.000 1.000   NA
 5823133 5823134 HAPS_0181 HAPS_0182 yccA clpB FALSE 0.168 118.000 0.000 NA   NA
 5823134 5823135 HAPS_0182 HAPS_0183 clpB dsbC FALSE 0.090 303.000 0.000 1.000 Y NA
 5823135 5823136 HAPS_0183 HAPS_0184 dsbC   TRUE 0.977 12.000 0.033 1.000 N NA
 5823137 5823138 HAPS_0185 HAPS_0186 znuC znuB TRUE 0.999 11.000 0.755 1.000 Y NA
 5823138 5823139 HAPS_0186 HAPS_0187 znuB glmS TRUE 0.361 124.000 0.011 1.000   NA
 5823140 5823141 HAPS_0188 HAPS_0189 lacD ptsEIIA TRUE 0.966 11.000 0.000 1.000 Y NA
 5823141 5823142 HAPS_0189 HAPS_0190 ptsEIIA bgaC FALSE 0.287 161.000 0.000 1.000 Y NA
 5823142 5823143 HAPS_0190 HAPS_0191 bgaC ptsEIID FALSE 0.247 179.000 0.000 1.000 Y NA
 5823143 5823144 HAPS_0191 HAPS_0192 ptsEIID ptsEIIC TRUE 0.873 -13.000 0.000 0.011 Y NA
 5823144 5823145 HAPS_0192 HAPS_0193 ptsEIIC ptsEIIB TRUE 0.999 14.000 0.810 0.011 Y NA
 5823145 5823146 HAPS_0193 HAPS_0194 ptsEIIB agaS TRUE 0.846 17.000 0.000 1.000 N NA
 5823146 5823147 HAPS_0194 HAPS_0195 agaS agaR TRUE 0.541 52.000 0.000 1.000 N NA
 5823148 5823149 HAPS_0196 HAPS_0197 rdgC afuB FALSE 0.044 254.000 0.000 1.000 N NA
 5823149 5823150 HAPS_0197 HAPS_0198 afuB fbpC TRUE 0.987 -16.000 0.444 0.047 N NA
 5823150 5823151 HAPS_0198 HAPS_0199 fbpC   FALSE 0.218 94.000 0.000 NA   NA
 5823151 5823152 HAPS_0199 HAPS_0200     FALSE 0.041 256.000 0.000 NA   NA
 5823152 5823153 HAPS_0200 HAPS_0201   nusA TRUE 0.998 15.000 0.759 NA   NA
 5823153 5823154 HAPS_0201 HAPS_0202 nusA infB TRUE 0.992 18.000 0.342 1.000 N NA
 5823154 5823155 HAPS_0202 HAPS_0203 infB   FALSE 0.140 140.000 0.000 NA   NA
 5823155 5823156 HAPS_0203 HAPS_0204     TRUE 0.845 -7.000 0.000 NA   NA
 5823161 5823162 HAPS_0209 HAPS_0210     TRUE 0.994 2.000 0.133 NA   NA
 5823162 5823163 HAPS_0210 HAPS_0211   kdkA FALSE 0.066 204.000 0.000 NA   NA
 5823164 5823165 HAPS_0212 HAPS_0213 folE thiI FALSE 0.134 145.000 0.000 NA   NA
 5823165 5823166 HAPS_0213 HAPS_0214 thiI glmU TRUE 0.900 23.000 0.002 1.000 N NA
 5823166 5823167 HAPS_0214 HAPS_0215 glmU rseB FALSE 0.039 292.000 0.000 NA N NA
 5823167 5823168 HAPS_0215 HAPS_0216 rseB rseC TRUE 0.999 -3.000 0.609 NA Y NA
 5823168 5823169 HAPS_0216 HAPS_0217 rseC lcfA TRUE 0.978 11.000 0.022 NA N NA
 5823169 5823170 HAPS_0217 HAPS_0218 lcfA   FALSE 0.193 109.000 0.000 1.000 N NA
 5823170 5823171 HAPS_0218 HAPS_0219     TRUE 0.992 2.000 0.088 1.000   NA
 5823171 5823172 HAPS_0219 HAPS_0220   ompD15 TRUE 0.877 30.000 0.010 1.000   NA
 5823172 5823173 HAPS_0220 HAPS_0221 ompD15   TRUE 0.997 13.000 0.575 NA   NA
 5823173 5823174 HAPS_0221 HAPS_0222   abiQ FALSE 0.046 238.000 0.000 NA   NA
 5823174 5823175 HAPS_0222 HAPS_0223 abiQ cydD TRUE 0.603 45.000 0.000 NA   NA
 5823175 5823176 HAPS_0223 HAPS_0224 cydD cydC TRUE 0.999 4.000 0.631 0.006 Y NA
 5823177 5823178 HAPS_0225 HAPS_0226 mutT secA TRUE 0.879 69.000 0.168 1.000 N NA
 5823178 5823179 HAPS_0226 HAPS_0227 secA   TRUE 0.629 88.000 0.031 NA   NA
 5823180 5823181 HAPS_0228 HAPS_0229   nlpE TRUE 0.960 18.000 0.027 NA   NA
 5823182 5823183 HAPS_0230 HAPS_0231 folK pcnB TRUE 0.996 0.000 0.234 1.000 N NA
 5823183 5823184 HAPS_0231 HAPS_0232 pcnB dksA FALSE 0.287 191.000 0.023 1.000 N NA
 5823184 5823185 HAPS_0232 HAPS_0233 dksA malQ FALSE 0.057 220.000 0.000 1.000 N NA
 5823185 5823186 HAPS_0233 HAPS_0234 malQ malG TRUE 0.775 110.000 0.051 1.000 Y NA
 5823186 5823187 HAPS_0234 HAPS_0235 malG malF TRUE 0.999 11.000 0.814 0.047 Y NA
 5823187 5823188 HAPS_0235 HAPS_0236 malF malE TRUE 0.379 249.000 0.040 1.000 Y NA
 5823189 5823190 HAPS_0237 HAPS_0238 malK hemN FALSE 0.070 204.000 0.000 1.000 N NA
 5823191 5823192 HAPS_0239 HAPS_0240     FALSE 0.060 211.000 0.000 NA   NA
 5823192 5823193 HAPS_0240 HAPS_0241     TRUE 0.913 -1.000 0.000 NA   NA
 5823193 5823194 HAPS_0241 HAPS_0242     TRUE 0.790 -12.000 0.000 NA   NA
 5823194 5823195 HAPS_0242 HAPS_0243     TRUE 0.702 -28.000 0.000 NA   NA
 5823196 5823197 HAPS_0244 HAPS_0245     TRUE 0.896 11.000 0.000 NA   NA
 5823197 5823198 HAPS_0245 HAPS_0246     TRUE 0.396 65.000 0.000 NA   NA
 5823198 5823199 HAPS_0246 HAPS_0247     FALSE 0.224 93.000 0.000 NA   NA
 5823201 5823202 HAPS_0249 HAPS_0250   lolA TRUE 0.434 62.000 0.000 NA   NA
 5823202 5823203 HAPS_0250 HAPS_0251 lolA trpR TRUE 0.602 71.000 0.005 1.000 N NA
 5823203 5823204 HAPS_0251 HAPS_0252 trpR mtgA TRUE 0.928 -16.000 0.025 1.000   NA
 5823205 5823206 HAPS_0253 HAPS_0254     TRUE 1.000 3.000 0.973 NA Y NA
 5823206 5823207 HAPS_0254 HAPS_0255     TRUE 0.978 9.000 0.000 NA Y NA
 5823208 5823209 HAPS_0256 HAPS_0257   mip TRUE 0.955 47.000 0.200 NA   NA
 5823209 5823210 HAPS_0257 HAPS_0258 mip rimK TRUE 0.803 21.000 0.000 NA   NA
 5823210 5823211 HAPS_0258 HAPS_0259 rimK mukF FALSE 0.190 126.000 0.000 NA N NA
 5823211 5823212 HAPS_0259 HAPS_0260 mukF mukE TRUE 0.976 47.000 0.143 NA Y NA
 5823212 5823213 HAPS_0260 HAPS_0261 mukE hpaIIM TRUE 0.819 20.000 0.000 1.000 N NA
 5823213 5823214 HAPS_0261 HAPS_0262 hpaIIM   TRUE 0.995 8.000 0.211 NA   NA
 5823214 5823215 HAPS_0262 HAPS_0263   mukB TRUE 0.848 16.000 0.000 NA   NA
 5823216 5823217 HAPS_0264 HAPS_0265 cca frxA TRUE 0.566 49.000 0.000 1.000 N NA
 5823221 5823222 HAPS_0269 HAPS_0270 cdtC cdtB TRUE 0.986 11.000 0.188 0.005   NA
 5823222 5823223 HAPS_0270 HAPS_0271 cdtB cdtA TRUE 0.989 9.000 0.158 0.005   NA
 5823223 5823224 HAPS_0271 HAPS_0272 cdtA glnS FALSE 0.155 108.000 0.000 1.000   NA
 5823225 5823226 HAPS_0273 HAPS_0274 glpX recJ FALSE 0.119 158.000 0.000 1.000 N NA
 5823226 5823227 HAPS_0274 HAPS_0275 recJ plpD TRUE 0.304 129.000 0.002 1.000 N NA
 5823227 5823228 HAPS_0275 HAPS_0276 plpD   TRUE 0.500 90.000 0.013 1.000   NA
 5823228 5823229 HAPS_0276 HAPS_0277     TRUE 0.667 13.000 0.000 0.035   NA
 5823229 5823230 HAPS_0277 HAPS_0278   dapA TRUE 0.422 112.000 0.000 1.000 Y NA
 5823230 5823231 HAPS_0278 HAPS_0279 dapA lysS FALSE 0.105 168.000 0.000 1.000 N NA
 5823231 5823232 HAPS_0279 HAPS_0280 lysS   FALSE 0.039 260.000 0.000 NA   NA
 5823232 5823233 HAPS_0280 HAPS_0281   rpsB FALSE 0.028 312.000 0.000 NA   NA
 5823233 5823234 HAPS_0281 HAPS_0282 rpsB tsf TRUE 0.975 95.000 0.748 1.000 Y NA
 5823236 5823237 HAPS_0284 HAPS_0285 fdxG_2 fdxG_1 TRUE 0.956 49.000 0.400 0.003   NA
 5823237 5823238 HAPS_0285 HAPS_0286 fdxG_1 fdxH TRUE 0.994 2.000 0.238 0.002   NA
 5823238 5823239 HAPS_0286 HAPS_0287 fdxH fdxI TRUE 0.995 -7.000 0.381 0.002 Y NA
 5823239 5823240 HAPS_0287 HAPS_0288 fdxI   FALSE 0.049 232.000 0.000 NA   NA
 5823240 5823241 HAPS_0288 HAPS_0289     TRUE 0.682 -46.000 0.000 NA   NA
 5823241 5823242 HAPS_0289 HAPS_0290   glgB FALSE 0.038 265.000 0.000 NA   NA
 5823242 5823243 HAPS_0290 HAPS_0291 glgB glgX TRUE 0.336 270.000 0.098 0.003 Y NA
 5823243 5823244 HAPS_0291 HAPS_0292 glgX glgC TRUE 0.989 31.000 0.228 1.000 Y NA
 5823244 5823245 HAPS_0292 HAPS_0293 glgC glgA TRUE 0.888 140.000 0.307 1.000 Y NA
 5823245 5823246 HAPS_0293 HAPS_0294 glgA guaB FALSE 0.099 152.000 0.000 1.000   NA
 5823246 5823247 HAPS_0294 HAPS_0295 guaB   FALSE 0.038 265.000 0.000 NA   NA
 5823247 5823248 HAPS_0295 HAPS_0296     TRUE 0.848 16.000 0.000 NA   NA
 5823248 5823249 HAPS_0296 HAPS_0297   guaA TRUE 0.327 72.000 0.000 NA   NA
 5823249 5823250 HAPS_0297 HAPS_0298 guaA   FALSE 0.145 135.000 0.000 NA   NA
 5823251 5823252 HAPS_0299 HAPS_0300     FALSE 0.157 124.000 0.000 NA   NA
 5823252 5823253 HAPS_0300 HAPS_0301     FALSE 0.019 449.000 0.000 NA   NA
 5823253 5823254 HAPS_0301 HAPS_0302     TRUE 0.990 -3.000 0.150 NA   NA
 5823254 5823255 HAPS_0302 HAPS_0303   dmcA TRUE 0.949 47.000 0.174 NA   NA
 5823255 5823256 HAPS_0303 HAPS_0304 dmcA   TRUE 0.980 16.000 0.087 NA   NA
 5823256 5823257 HAPS_0304 HAPS_0305     TRUE 0.745 27.000 0.000 NA   NA
 5823257 5823258 HAPS_0305 HAPS_0306     FALSE 0.060 211.000 0.000 NA   NA
 5823258 5823259 HAPS_0306 HAPS_0307     TRUE 0.434 62.000 0.000 NA   NA
 5823259 5823260 HAPS_0307 HAPS_0308     TRUE 0.921 9.000 0.000 NA   NA
 5823262 5823263 HAPS_0310 HAPS_0311 xthA yojA TRUE 0.497 116.000 0.024 NA   NA
 5823263 5823264 HAPS_0311 HAPS_0312 yojA mesJ FALSE 0.029 308.000 0.000 NA   NA
 5823264 5823265 HAPS_0312 HAPS_0314 mesJ   FALSE 0.155 126.000 0.000 NA   NA
 5823268 5823269 HAPS_0315 HAPS_0317   glnE FALSE 0.087 162.000 0.000 1.000   NA
 5823269 5823270 HAPS_0317 HAPS_0318 glnE queF TRUE 0.806 17.000 0.000 1.000   NA
 5823270 5823271 HAPS_0318 HAPS_0319 queF lrp FALSE 0.147 113.000 0.000 1.000   NA
 5823271 5823272 HAPS_0319 HAPS_0320 lrp ftsK TRUE 0.996 10.000 0.345 1.000 N NA
 5823272 5823273 HAPS_0320 HAPS_0321 ftsK aroG FALSE 0.271 84.000 0.000 1.000 N NA
 5823273 5823274 HAPS_0321 HAPS_0322 aroG   TRUE 0.970 9.000 0.004 1.000 N NA
 5823274 5823275 HAPS_0322 HAPS_0323     TRUE 0.927 8.000 0.000 NA   NA
 5823276 5823277 HAPS_0324 HAPS_0325 cdtC cdtB TRUE 0.986 11.000 0.188 0.005   NA
 5823277 5823278 HAPS_0325 HAPS_0326 cdtB cdtA TRUE 0.989 9.000 0.158 0.005   NA
 5823278 5823279 HAPS_0326 HAPS_0327 cdtA tgt FALSE 0.134 120.000 0.000 1.000   NA
 5823279 5823280 HAPS_0327 HAPS_0328 tgt gyrB FALSE 0.291 80.000 0.000 1.000 N NA
 5823281 5823282 HAPS_0329 HAPS_0330 yajC sirA TRUE 0.992 0.000 0.104 NA   NA
 5823283 5823284 HAPS_0331 HAPS_0332     TRUE 0.956 16.000 0.014 NA   NA
 5823285 5823286 HAPS_0333 HAPS_0334 pmbA ykvZ FALSE 0.032 290.000 0.000 NA   NA
 5823287 5823288 HAPS_0335 HAPS_0336 leuD leuC TRUE 0.996 12.000 0.309 0.001 Y NA
 5823290 5823291 HAPS_0338 HAPS_0339 proP rsuA TRUE 0.995 1.000 0.182 1.000 N NA
 5823291 5823292 HAPS_0339 HAPS_0340 rsuA cpxA FALSE 0.278 83.000 0.000 1.000 N NA
 5823292 5823293 HAPS_0340 HAPS_0341 cpxA cpxR TRUE 0.988 70.000 0.791 1.000 Y NA
 5823293 5823294 HAPS_0341 HAPS_0342 cpxR mazG TRUE 0.390 100.000 0.006 1.000   NA
 5823295 5823296 HAPS_0343 HAPS_0344 pepP phd TRUE 0.470 64.000 0.000 NA N NA
 5823296 5823297 HAPS_0344 HAPS_0345 phd pilT TRUE 0.984 -3.000 0.061 NA   NA
 5823297 5823298 HAPS_0345 HAPS_0346 pilT serC TRUE 0.396 65.000 0.000 NA   NA
 5823300 5823301 HAPS_0348 HAPS_0349 hsdM hsdS TRUE 0.984 -7.000 0.050 0.087 Y NA
 5823301 5823302 HAPS_0349 HAPS_0350 hsdS hsdR FALSE 0.026 830.000 0.000 0.004 Y NA
 5823302 5823303 HAPS_0350 HAPS_0351 hsdR hisC TRUE 0.683 35.000 0.000 1.000 N NA
 5823303 5823304 HAPS_0351 HAPS_0352 hisC   FALSE 0.037 267.000 0.000 NA   NA
 5823305 5823306 HAPS_0353 HAPS_0354 rluA asnC FALSE 0.049 232.000 0.000 NA   NA
 5823306 5823307 HAPS_0354 HAPS_0355 asnC irp FALSE 0.060 214.000 0.000 1.000 N NA
 5823308 5823309 HAPS_0356 HAPS_0357 ppx ppc FALSE 0.113 161.000 0.000 1.000 N NA
 5823309 5823310 HAPS_0357 HAPS_0358 ppc aroA FALSE 0.045 248.000 0.000 1.000 N NA
 5823312 5823313 HAPS_0360 HAPS_0361 bcp gmhB TRUE 0.925 -10.000 0.005 1.000 N NA
 5823313 5823314 HAPS_0361 HAPS_0362 gmhB hpt FALSE 0.153 134.000 0.000 1.000 N NA
 5823314 5823315 HAPS_0362 HAPS_0363 hpt slt TRUE 0.492 93.000 0.008 1.000 N NA
 5823315 5823316 HAPS_0363 HAPS_0364 slt   FALSE 0.233 90.000 0.000 NA   NA
 5823316 5823317 HAPS_0364 HAPS_0365   fieF TRUE 0.984 0.000 0.023 NA   NA
 5823319 5823320 HAPS_0367 HAPS_0368 menC sclB3 FALSE 0.039 262.000 0.000 NA   NA
 5823321 5823322 HAPS_0369 HAPS_0370     TRUE 0.691 -34.000 0.000 NA   NA
 5823322 5823323 HAPS_0370 HAPS_0371   uvrA FALSE 0.254 85.000 0.000 NA   NA
 5823324 5823325 HAPS_0372 HAPS_0373 ssb   FALSE 0.050 208.000 0.000 1.000   NA
 5823326 5823327 HAPS_0374 HAPS_0375   rhlB TRUE 0.910 10.000 0.000 NA   NA
 5823327 5823328 HAPS_0375 HAPS_0376 rhlB higA TRUE 0.354 64.000 0.000 1.000   NA
 5823328 5823329 HAPS_0376 HAPS_0377 higA higB TRUE 0.896 11.000 0.000 NA   NA
 5823330 5823331 HAPS_0378 HAPS_0379 arg glyA FALSE 0.075 347.000 0.000 1.000 Y NA
 5823331 5823332 HAPS_0379 HAPS_0380 glyA xseA FALSE 0.184 114.000 0.000 1.000 N NA
 5823336 5823337 HAPS_0384 HAPS_0385 seqA menE TRUE 0.988 4.000 0.029 1.000 N NA
 5823337 5823338 HAPS_0385 HAPS_0386 menE kefA TRUE 0.851 -7.000 0.000 1.000 N NA
 5823338 5823339 HAPS_0386 HAPS_0387 kefA aroC TRUE 0.313 126.000 0.003 1.000 N NA
 5823339 5823340 HAPS_0387 HAPS_0388 aroC higB FALSE 0.063 208.000 0.000 NA   NA
 5823340 5823341 HAPS_0388 HAPS_0389 higB higA TRUE 0.921 9.000 0.000 NA   NA
 5823343 5823344 HAPS_0391 HAPS_0392 rnd ackA FALSE 0.020 449.000 0.000 1.000 N NA
 5823347 5823348 HAPS_0395 HAPS_0396   sspB FALSE 0.090 179.000 0.000 NA   NA
 5823348 5823349 HAPS_0396 HAPS_0397 sspB sspA TRUE 0.999 2.000 0.831 NA   NA
 5823351 5823352 HAPS_0399 HAPS_0400 folC accD TRUE 0.997 0.000 0.383 1.000 N NA
 5823352 5823353 HAPS_0400 HAPS_0401 accD chpA FALSE 0.254 88.000 0.000 1.000 N NA
 5823353 5823354 HAPS_0401 HAPS_0402 chpA chpS TRUE 0.998 0.000 0.167 NA Y NA
 5823358 5823359 HAPS_0406 HAPS_0407 nanA   TRUE 0.888 82.000 0.273 1.000 N NA
 5823359 5823360 HAPS_0407 HAPS_0408     TRUE 0.998 2.000 0.385 NA N NA
 5823360 5823361 HAPS_0408 HAPS_0409     FALSE 0.014 763.000 0.000 NA   NA
 5823362 5823363 HAPS_0410 HAPS_0411 higB higA TRUE 0.985 12.000 0.077 NA   NA
 5823364 5823365 HAPS_0412 HAPS_0413     TRUE 0.930 7.000 0.000 NA   NA
 5823367 5823368 HAPS_0415 HAPS_0416     FALSE 0.168 118.000 0.000 NA   NA
 5823368 5823369 HAPS_0416 HAPS_0417     FALSE 0.289 77.000 0.000 NA   NA
 5823369 5823370 HAPS_0417 HAPS_0418     TRUE 0.941 2.000 0.000 NA   NA
 5823370 5823371 HAPS_0418 HAPS_0419     TRUE 0.921 9.000 0.000 NA   NA
 5823371 5823372 HAPS_0419 HAPS_0420   ant FALSE 0.161 121.000 0.000 NA   NA
 5823372 5823373 HAPS_0420 HAPS_0421 ant   FALSE 0.038 266.000 0.000 NA   NA
 5823373 5823374 HAPS_0421 HAPS_0422   ant TRUE 0.459 59.000 0.000 NA   NA
 5823374 5823375 HAPS_0422 HAPS_0423 ant   FALSE 0.040 258.000 0.000 NA   NA
 5823375 5823376 HAPS_0423 HAPS_0424     TRUE 0.939 4.000 0.000 NA   NA
 5823376 5823377 HAPS_0424 HAPS_0425   intA TRUE 0.735 28.000 0.000 NA   NA
 5823377 5823378 HAPS_0425 HAPS_0426 intA   FALSE 0.085 185.000 0.000 NA   NA
 5823378 5823379 HAPS_0426 HAPS_0427   secG TRUE 0.864 14.000 0.000 NA   NA
 5823379 5823380 HAPS_0427 HAPS_0428 secG topB TRUE 0.382 126.000 0.008 1.000 N NA
 5823380 5823381 HAPS_0428 HAPS_0429 topB mepA TRUE 0.984 8.000 0.024 1.000 N NA
 5823381 5823382 HAPS_0429 HAPS_0430 mepA ygdE FALSE 0.203 98.000 0.000 NA   NA
 5823382 5823383 HAPS_0430 HAPS_0431 ygdE pyrG TRUE 0.929 0.000 0.000 NA   NA
 5823383 5823384 HAPS_0431 HAPS_0432 pyrG   TRUE 0.311 74.000 0.000 NA   NA
 5823384 5823385 HAPS_0432 HAPS_0433     TRUE 0.910 10.000 0.000 NA   NA
 5823385 5823386 HAPS_0433 HAPS_0434     TRUE 0.996 10.000 0.303 NA   NA
 5823386 5823387 HAPS_0434 HAPS_0435     TRUE 0.811 20.000 0.000 NA   NA
 5823388 5823389 HAPS_0436 HAPS_0437 moaA moaC TRUE 0.551 154.000 0.039 0.005 Y NA
 5823389 5823390 HAPS_0437 HAPS_0438 moaC moaD TRUE 0.870 85.000 0.175 0.005 Y NA
 5823390 5823391 HAPS_0438 HAPS_0439 moaD moaE TRUE 0.999 1.000 0.501 0.005 Y NA
 5823391 5823392 HAPS_0439 HAPS_0440 moaE   TRUE 0.848 32.000 0.003 NA   NA
 5823392 5823393 HAPS_0440 HAPS_0441     TRUE 0.976 0.000 0.007 NA   NA
 5823393 5823394 HAPS_0441 HAPS_0442   mglB FALSE 0.156 125.000 0.000 NA   NA
 5823394 5823395 HAPS_0442 HAPS_0443 mglB mglA TRUE 0.967 53.000 0.139 NA Y NA
 5823395 5823396 HAPS_0443 HAPS_0444 mglA mglC TRUE 0.999 17.000 0.905 1.000 Y NA
 5823397 5823398 HAPS_0445 HAPS_0446 metQ plpA TRUE 0.649 72.000 0.000 NA Y NA
 5823398 5823399 HAPS_0446 HAPS_0447 plpA metI TRUE 0.988 33.000 0.205 NA Y NA
 5823399 5823400 HAPS_0447 HAPS_0448 metI metN TRUE 0.989 -10.000 0.112 1.000 Y NA
 5823401 5823402 HAPS_0449 HAPS_0450 marC oppA TRUE 0.985 2.000 0.012 NA N NA
 5823402 5823403 HAPS_0450 HAPS_0451 oppA mrp TRUE 0.982 1.000 0.011 1.000 N NA
 5823406 5823407 HAPS_0454 HAPS_0455 moeB yciH TRUE 0.944 3.000 0.000 1.000 N NA
 5823407 5823408 HAPS_0455 HAPS_0456 yciH pyrF TRUE 0.936 32.000 0.045 1.000 N NA
 5823408 5823409 HAPS_0456 HAPS_0457 pyrF   TRUE 0.984 16.000 0.125 1.000 N NA
 5823409 5823410 HAPS_0457 HAPS_0458     TRUE 0.998 0.000 0.576 NA   NA
 5823410 5823411 HAPS_0458 HAPS_0459   ihfB TRUE 0.896 69.000 0.208 NA   NA
 5823411 5823412 HAPS_0459 HAPS_0460 ihfB rpsA TRUE 0.933 66.000 0.292 1.000 N NA
 5823412 5823413 HAPS_0460 HAPS_0461 rpsA cmk TRUE 0.846 97.000 0.281 1.000 N NA
 5823413 5823414 HAPS_0461 HAPS_0462 cmk degS TRUE 0.964 10.000 0.004 1.000 N NA
 5823414 5823415 HAPS_0462 HAPS_0463 degS galU FALSE 0.192 110.000 0.000 1.000 N NA
 5823415 5823416 HAPS_0463 HAPS_0464 galU csrA TRUE 0.604 180.000 0.200 1.000 N NA
 5823416 5823417 HAPS_0464 HAPS_0465 csrA alaS TRUE 0.708 64.000 0.010 1.000 N NA
 5823417 5823418 HAPS_0465 HAPS_0466 alaS uspA FALSE 0.146 225.000 0.006 1.000 N NA
 5823420 5823421 HAPS_0468 HAPS_0469 yciI   TRUE 0.987 12.000 0.114 NA   NA
 5823421 5823422 HAPS_0469 HAPS_0470   ispZ TRUE 0.978 -16.000 0.167 NA N NA
 5823422 5823423 HAPS_0470 HAPS_0471 ispZ   TRUE 0.975 9.000 0.010 NA   NA
 5823425 5823426 HAPS_0473 HAPS_0474 tadA deaD TRUE 0.474 161.000 0.006 1.000 Y NA
 5823426 5823427 HAPS_0474 HAPS_0475 deaD nlpI FALSE 0.185 272.000 0.053 1.000   NA
 5823427 5823428 HAPS_0475 HAPS_0476 nlpI pnp TRUE 0.761 74.000 0.071 1.000   NA
 5823428 5823429 HAPS_0476 HAPS_0477 pnp cirA FALSE 0.017 515.000 0.000 NA   NA
 5823429 5823430 HAPS_0477 HAPS_0478 cirA ushA FALSE 0.194 103.000 0.000 NA   NA
 5823430 5823431 HAPS_0478 HAPS_0479 ushA dgkA TRUE 0.918 47.000 0.070 1.000 N NA
 5823431 5823432 HAPS_0479 HAPS_0480 dgkA arcB FALSE 0.065 158.000 0.000 0.086 N NA
 5823432 5823433 HAPS_0480 HAPS_0481 arcB ostA FALSE 0.257 86.000 0.000 1.000 N NA
 5823433 5823434 HAPS_0481 HAPS_0482 ostA hemN TRUE 0.372 149.000 0.015 1.000 N NA
 5823434 5823435 HAPS_0482 HAPS_0483 hemN   TRUE 0.997 3.000 0.244 NA   NA
 5823435 5823436 HAPS_0483 HAPS_0484     TRUE 0.999 9.000 0.679 NA   NA
 5823436 5823437 HAPS_0484 HAPS_0485   sanA FALSE 0.143 137.000 0.000 NA   NA
 5823437 5823438 HAPS_0485 HAPS_0486 sanA   TRUE 0.939 4.000 0.000 NA   NA
 5823439 5823440 HAPS_0487 HAPS_0488 dmsB dmsC TRUE 0.913 -1.000 0.000 NA   NA
 5823441 5823442 HAPS_0489 HAPS_0490   lpdA FALSE 0.156 131.000 0.000 1.000 N NA
 5823442 5823443 HAPS_0490 HAPS_0491 lpdA aceF TRUE 0.938 117.000 0.463 1.000 Y NA
 5823443 5823444 HAPS_0491 HAPS_0492 aceF aceE TRUE 0.973 55.000 0.220 1.000 Y NA
 5823444 5823445 HAPS_0492 HAPS_0493 aceE   FALSE 0.194 103.000 0.000 NA   NA
 5823446 5823447 HAPS_0494 HAPS_0495 purE ansB TRUE 0.779 46.000 0.002 1.000 N NA
 5823447 5823448 HAPS_0495 HAPS_0496 ansB purK TRUE 0.425 120.000 0.013 1.000 N NA
 5823448 5823449 HAPS_0496 HAPS_0497 purK ppiB FALSE 0.227 94.000 0.000 1.000 N NA
 5823449 5823450 HAPS_0497 HAPS_0498 ppiB ubiG TRUE 0.378 68.000 0.000 1.000 N NA
 5823451 5823452 HAPS_0499 HAPS_0500 sclB5 metK FALSE 0.015 745.000 0.000 NA   NA
 5823454 5823455 HAPS_0502 HAPS_0503     FALSE 0.172 116.000 0.000 NA   NA
 5823455 5823456 HAPS_0503 HAPS_0504     TRUE 0.858 15.000 0.000 NA   NA
 5823456 5823457 HAPS_0504 HAPS_0505   moeA FALSE 0.182 111.000 0.000 NA   NA
 5823461 5823462 HAPS_0509 HAPS_0510   ftsH TRUE 0.698 -31.000 0.000 NA   NA
 5823462 5823463 HAPS_0510 HAPS_0511 ftsH rrmJ TRUE 0.848 74.000 0.152 1.000 N NA
 5823464 5823465 HAPS_0512 HAPS_0513 fabI fic FALSE 0.237 80.000 0.000 1.000   NA
 5823466 5823467 HAPS_0514 HAPS_0515     TRUE 0.941 3.000 0.000 NA   NA
 5823468 5823469 HAPS_0516 HAPS_0517 rnb mltA FALSE 0.190 111.000 0.000 1.000 N NA
 5823469 5823470 HAPS_0517 HAPS_0518 mltA   FALSE 0.018 475.000 0.000 NA   NA
 5823471 5823472 HAPS_0519 HAPS_0520 sclB6   FALSE 0.125 150.000 0.000 NA   NA
 5823472 5823473 HAPS_0520 HAPS_0521   dedA FALSE 0.024 350.000 0.000 NA   NA
 5823473 5823474 HAPS_0521 HAPS_0522 dedA purR TRUE 0.984 11.000 0.056 NA   NA
 5823474 5823475 HAPS_0522 HAPS_0523 purR prmC FALSE 0.184 114.000 0.000 1.000 N NA
 5823477 5823478 HAPS_0525 HAPS_0526 tyrP tyrP TRUE 0.758 148.000 0.200 0.003 Y NA
 5823480 5823481 HAPS_0528 HAPS_0529 purL ccdA TRUE 0.942 18.000 0.000 1.000 Y NA
 5823481 5823482 HAPS_0529 HAPS_0530 ccdA msrA TRUE 0.999 2.000 0.400 1.000 Y NA
 5823482 5823483 HAPS_0530 HAPS_0531 msrA   FALSE 0.192 104.000 0.000 NA   NA
 5823484 5823485 HAPS_0532 HAPS_0533 rpoE   TRUE 0.989 -3.000 0.128 NA   NA
 5823486 5823487 HAPS_0534 HAPS_0535     FALSE 0.037 268.000 0.000 NA   NA
 5823488 5823489 HAPS_0536 HAPS_0537     TRUE 0.874 13.000 0.000 NA   NA
 5823489 5823490 HAPS_0537 HAPS_0538     TRUE 0.895 -3.000 0.000 NA   NA
 5823490 5823491 HAPS_0538 HAPS_0539     TRUE 0.673 35.000 0.000 NA   NA
 5823491 5823492 HAPS_0539 HAPS_0540     TRUE 0.740 -19.000 0.000 NA   NA
 5823492 5823493 HAPS_0540 HAPS_0541     TRUE 0.995 -15.000 0.667 NA   NA
 5823493 5823494 HAPS_0541 HAPS_0542     FALSE 0.086 183.000 0.000 NA   NA
 5823494 5823495 HAPS_0542 HAPS_0543   dnaK FALSE 0.065 206.000 0.000 NA   NA
 5823495 5823496 HAPS_0543 HAPS_0544 dnaK gpR TRUE 0.987 -3.000 0.087 NA   NA
 5823496 5823497 HAPS_0544 HAPS_0545 gpR gpS TRUE 0.971 41.000 0.261 NA   NA
 5823499 5823500 HAPS_0547 HAPS_0548 gpT   FALSE 0.153 127.000 0.000 NA   NA
 5823500 5823501 HAPS_0548 HAPS_0549     TRUE 0.845 -7.000 0.000 NA   NA
 5823501 5823502 HAPS_0549 HAPS_0550     FALSE 0.095 175.000 0.000 NA   NA
 5823502 5823503 HAPS_0550 HAPS_0551     FALSE 0.092 177.000 0.000 NA   NA
 5823503 5823504 HAPS_0551 HAPS_0552   ycfA FALSE 0.015 665.000 0.000 NA   NA
 5823504 5823505 HAPS_0552 HAPS_0553 ycfA   TRUE 0.970 30.000 0.176 NA   NA
 5823506 5823507 HAPS_0554 HAPS_0555   ninG TRUE 0.895 -3.000 0.000 NA   NA
 5823507 5823508 HAPS_0555 HAPS_0556 ninG ninB FALSE 0.134 145.000 0.000 NA   NA
 5823508 5823509 HAPS_0556 HAPS_0557 ninB   FALSE 0.048 235.000 0.000 NA   NA
 5823509 5823510 HAPS_0557 HAPS_0558     TRUE 0.929 0.000 0.000 NA   NA
 5823510 5823511 HAPS_0558 HAPS_0559     TRUE 0.895 -3.000 0.000 NA   NA
 5823511 5823512 HAPS_0559 HAPS_0560     FALSE 0.033 280.000 0.000 NA   NA
 5823513 5823514 HAPS_0561 HAPS_0562     TRUE 0.685 33.000 0.000 NA   NA
 5823514 5823515 HAPS_0562 HAPS_0563     TRUE 0.845 -7.000 0.000 NA   NA
 5823515 5823516 HAPS_0563 HAPS_0564   ycfA FALSE 0.168 118.000 0.000 NA   NA
 5823516 5823517 HAPS_0564 HAPS_0565 ycfA   TRUE 0.986 40.000 0.517 NA   NA
 5823517 5823518 HAPS_0565 HAPS_0566     FALSE 0.019 423.000 0.000 NA   NA
 5823518 5823519 HAPS_0566 HAPS_0567     FALSE 0.034 278.000 0.000 NA   NA
 5823523 5823524 HAPS_0571 HAPS_0572     FALSE 0.289 77.000 0.000 NA   NA
 5823524 5823525 HAPS_0572 HAPS_0573     TRUE 0.935 5.000 0.000 NA   NA
 5823525 5823526 HAPS_0573 HAPS_0574     FALSE 0.026 333.000 0.000 NA   NA
 5823526 5823527 HAPS_0574 HAPS_0575     FALSE 0.285 79.000 0.000 NA   NA
 5823527 5823528 HAPS_0575 HAPS_0576     TRUE 0.895 -3.000 0.000 NA   NA
 5823528 5823529 HAPS_0576 HAPS_0577     TRUE 0.775 -13.000 0.000 NA   NA
 5823529 5823530 HAPS_0577 HAPS_0578     TRUE 0.895 -3.000 0.000 NA   NA
 5823530 5823531 HAPS_0578 HAPS_0579     TRUE 0.949 54.000 0.364 0.081   NA
 5823531 5823532 HAPS_0579 HAPS_0580   ssb TRUE 0.912 0.000 0.000 1.000   NA
 5823534 5823535 HAPS_0582 HAPS_0583     TRUE 0.778 24.000 0.000 NA   NA
 5823536 5823537 HAPS_0584 HAPS_0585     FALSE 0.019 427.000 0.000 NA   NA
 5823537 5823538 HAPS_0585 HAPS_0586     FALSE 0.186 109.000 0.000 NA   NA
 5823538 5823539 HAPS_0586 HAPS_0587     TRUE 0.472 57.000 0.000 NA   NA
 5823539 5823540 HAPS_0587 HAPS_0588     FALSE 0.164 119.000 0.000 NA   NA
 5823540 5823541 HAPS_0588 HAPS_0589     FALSE 0.039 264.000 0.000 NA   NA
 5823541 5823542 HAPS_0589 HAPS_0590     FALSE 0.177 114.000 0.000 NA   NA
 5823542 5823543 HAPS_0590 HAPS_0591     TRUE 0.986 30.000 0.375 NA   NA
 5823543 5823544 HAPS_0591 HAPS_0592     TRUE 0.999 2.000 0.750 NA   NA
 5823544 5823545 HAPS_0592 HAPS_0593     TRUE 0.998 0.000 0.571 NA   NA
 5823545 5823546 HAPS_0593 HAPS_0594     TRUE 0.980 45.000 0.429 NA   NA
 5823546 5823547 HAPS_0594 HAPS_0595     TRUE 0.482 56.000 0.000 NA   NA
 5823547 5823548 HAPS_0595 HAPS_0596     FALSE 0.069 202.000 0.000 NA   NA
 5823548 5823549 HAPS_0596 HAPS_0597   relE FALSE 0.261 84.000 0.000 NA   NA
 5823549 5823550 HAPS_0597 HAPS_0598 relE relB TRUE 0.999 4.000 0.800 NA   NA
 5823550 5823551 HAPS_0598 HAPS_0599 relB   TRUE 0.352 69.000 0.000 NA   NA
 5823551 5823552 HAPS_0599 HAPS_0600     TRUE 0.994 45.000 1.000 NA   NA
 5823552 5823553 HAPS_0600 HAPS_0601     TRUE 0.969 74.000 0.750 NA   NA
 5823553 5823554 HAPS_0601 HAPS_0602     TRUE 0.998 3.000 0.375 NA   NA
 5823554 5823555 HAPS_0602 HAPS_0603     TRUE 0.999 0.000 1.000 NA   NA
 5823555 5823556 HAPS_0603 HAPS_0604     TRUE 0.999 4.000 0.667 NA   NA
 5823556 5823557 HAPS_0604 HAPS_0605     TRUE 0.976 -7.000 0.061 NA   NA
 5823557 5823558 HAPS_0605 HAPS_0606     TRUE 0.960 68.000 0.537 NA   NA
 5823558 5823559 HAPS_0606 HAPS_0607     TRUE 0.958 25.000 0.073 1.000   NA
 5823559 5823560 HAPS_0607 HAPS_0608     TRUE 0.938 1.000 0.000 NA   NA
 5823560 5823561 HAPS_0608 HAPS_0609     TRUE 0.831 18.000 0.000 NA   NA
 5823561 5823562 HAPS_0609 HAPS_0610     TRUE 0.998 0.000 0.571 NA   NA
 5823562 5823563 HAPS_0610 HAPS_0611     TRUE 0.638 40.000 0.000 NA   NA
 5823563 5823564 HAPS_0611 HAPS_0612     TRUE 0.687 -37.000 0.000 NA   NA
 5823564 5823565 HAPS_0612 HAPS_0613     TRUE 0.997 0.000 0.375 NA   NA
 5823565 5823566 HAPS_0613 HAPS_0614     TRUE 0.986 -25.000 0.375 NA   NA
 5823567 5823568 HAPS_0615 HAPS_0616     FALSE 0.233 90.000 0.000 NA   NA
 5823571 5823572 HAPS_0619 HAPS_0620   ninG TRUE 0.895 -3.000 0.000 NA   NA
 5823572 5823573 HAPS_0620 HAPS_0621 ninG ninB FALSE 0.134 145.000 0.000 NA   NA
 5823573 5823574 HAPS_0621 HAPS_0622 ninB   FALSE 0.048 235.000 0.000 NA   NA
 5823574 5823575 HAPS_0622 HAPS_0623     TRUE 0.929 0.000 0.000 NA   NA
 5823575 5823576 HAPS_0623 HAPS_0624     TRUE 0.895 -3.000 0.000 NA   NA
 5823576 5823577 HAPS_0624 HAPS_0625     FALSE 0.033 280.000 0.000 NA   NA
 5823578 5823579 HAPS_0626 HAPS_0627 prtR   FALSE 0.278 81.000 0.000 NA   NA
 5823579 5823580 HAPS_0627 HAPS_0628     FALSE 0.146 134.000 0.000 NA   NA
 5823580 5823581 HAPS_0628 HAPS_0629   dam TRUE 0.936 45.000 0.100 NA   NA
 5823587 5823588 HAPS_0635 HAPS_0636     FALSE 0.091 178.000 0.000 NA   NA
 5823593 5823594 HAPS_0641 HAPS_0642     FALSE 0.045 242.000 0.000 NA   NA
 5823594 5823595 HAPS_0642 HAPS_0643   apaH TRUE 0.334 71.000 0.000 NA   NA
 5823595 5823596 HAPS_0643 HAPS_0644 apaH mltB TRUE 0.929 10.000 0.000 NA N NA
 5823596 5823597 HAPS_0644 HAPS_0645 mltB truB TRUE 0.959 13.000 0.005 NA N NA
 5823597 5823598 HAPS_0645 HAPS_0646 truB rbfA TRUE 0.999 3.000 0.318 1.000 Y NA
 5823598 5823599 HAPS_0646 HAPS_0647 rbfA   TRUE 0.618 43.000 0.000 NA   NA
 5823599 5823600 HAPS_0647 HAPS_0648     TRUE 0.927 8.000 0.000 NA   NA
 5823600 5823601 HAPS_0648 HAPS_0649   dog2 FALSE 0.147 133.000 0.000 NA   NA
 5823601 5823602 HAPS_0649 HAPS_0650 dog2 rplY FALSE 0.019 419.000 0.000 NA   NA
 5823603 5823604 HAPS_0651 HAPS_0652 glgP lysE FALSE 0.044 219.000 0.000 1.000   NA
 5823604 5823605 HAPS_0652 HAPS_0653 lysE kgd FALSE 0.035 246.000 0.000 1.000   NA
 5823605 5823606 HAPS_0653 HAPS_0654 kgd   TRUE 0.667 36.000 0.000 NA   NA
 5823606 5823607 HAPS_0654 HAPS_0655   sucB TRUE 0.848 16.000 0.000 NA   NA
 5823607 5823608 HAPS_0655 HAPS_0656 sucB sucC TRUE 0.942 65.000 0.136 1.000 Y NA
 5823608 5823609 HAPS_0656 HAPS_0657 sucC sucD TRUE 0.999 0.000 0.806 0.001 Y NA
 5823610 5823611 HAPS_0658 HAPS_0659 kefBC serS FALSE 0.078 195.000 0.000 1.000 N NA
 5823611 5823612 HAPS_0659 HAPS_0660 serS glyQ FALSE 0.251 76.000 0.000 1.000   NA
 5823612 5823613 HAPS_0660 HAPS_0661 glyQ smpB FALSE 0.029 269.000 0.000 1.000   NA
 5823613 5823614 HAPS_0661 HAPS_0662 smpB   TRUE 0.315 123.000 0.003 NA   NA
 5823614 5823615 HAPS_0662 HAPS_0663   ubiH TRUE 0.896 11.000 0.000 NA   NA
 5823615 5823616 HAPS_0663 HAPS_0664 ubiH selD FALSE 0.158 130.000 0.000 1.000 N NA
 5823616 5823617 HAPS_0664 HAPS_0665 selD   FALSE 0.194 103.000 0.000 NA   NA
 5823618 5823619 HAPS_0666 HAPS_0667     TRUE 0.660 37.000 0.000 NA   NA
 5823619 5823620 HAPS_0667 HAPS_0668   perM FALSE 0.047 237.000 0.000 NA   NA
 5823620 5823621 HAPS_0668 HAPS_0669 perM queA TRUE 0.364 102.000 0.002 NA   NA
 5823622 5823623 HAPS_0670 HAPS_0671 fdhE mdoB TRUE 0.675 43.000 0.000 NA N NA
 5823623 5823624 HAPS_0671 HAPS_0672 mdoB ycbX TRUE 0.982 5.000 0.021 1.000   NA
 5823625 5823626 HAPS_0673 HAPS_0674 xseB ispA TRUE 0.995 0.000 0.177 1.000 N NA
 5823627 5823628 HAPS_0675 HAPS_0676   fadJ TRUE 0.831 50.000 0.024 1.000   NA
 5823628 5823629 HAPS_0676 HAPS_0677 fadJ fadI TRUE 0.999 5.000 0.430 1.000 Y NA
 5823629 5823630 HAPS_0677 HAPS_0678 fadI   FALSE 0.148 112.000 0.000 1.000   NA
 5823630 5823631 HAPS_0678 HAPS_0679     TRUE 0.998 5.000 0.600 0.002   NA
 5823631 5823632 HAPS_0679 HAPS_0680     TRUE 0.999 2.000 0.600 NA Y NA
 5823632 5823633 HAPS_0680 HAPS_0681   lctP TRUE 0.836 212.000 0.467 NA Y NA
 5823633 5823634 HAPS_0681 HAPS_0682 lctP folA FALSE 0.087 189.000 0.000 1.000 N NA
 5823635 5823636 HAPS_0683 HAPS_0684 proB   TRUE 0.926 23.000 0.014 1.000   NA
 5823636 5823637 HAPS_0684 HAPS_0685   nth TRUE 0.971 4.000 0.003 1.000   NA
 5823638 5823639 HAPS_0686 HAPS_0687   sclB7 FALSE 0.296 76.000 0.000 NA   NA
 5823639 5823640 HAPS_0687 HAPS_0688 sclB7   FALSE 0.017 536.000 0.000 NA   NA
 5823640 5823641 HAPS_0688 HAPS_0689     TRUE 0.892 74.000 0.233 NA   NA
 5823641 5823642 HAPS_0689 HAPS_0690     TRUE 0.998 20.000 0.937 NA   NA
 5823643 5823644 HAPS_0691 HAPS_0692 pheS pheT TRUE 0.876 173.000 0.574 0.001 Y NA
 5823644 5823645 HAPS_0692 HAPS_0693 pheT ihfA TRUE 0.988 17.000 0.208 1.000 N NA
 5823645 5823646 HAPS_0693 HAPS_0694 ihfA   TRUE 0.856 53.000 0.026 NA N NA
 5823646 5823647 HAPS_0694 HAPS_0695   udk FALSE 0.105 188.000 0.000 NA N NA
 5823647 5823648 HAPS_0695 HAPS_0696 udk dcd TRUE 0.991 17.000 0.098 1.000 Y NA
 5823649 5823650 HAPS_0697 HAPS_0698 purF cvpA TRUE 0.991 15.000 0.262 1.000   NA
 5823650 5823651 HAPS_0698 HAPS_0699 cvpA sdhA FALSE 0.157 106.000 0.000 1.000   NA
 5823651 5823652 HAPS_0699 HAPS_0700 sdhA trmU FALSE 0.095 175.000 0.000 NA   NA
 5823652 5823653 HAPS_0700 HAPS_0701 trmU yjgF TRUE 0.978 4.000 0.005 NA   NA
 5823654 5823655 HAPS_0702 HAPS_0703     TRUE 0.993 -10.000 0.483 NA   NA
 5823655 5823656 HAPS_0703 HAPS_0704   ndpA TRUE 0.735 28.000 0.000 NA   NA
 5823656 5823657 HAPS_0704 HAPS_0705 ndpA smpA TRUE 0.839 61.000 0.049 NA   NA
 5823657 5823658 HAPS_0705 HAPS_0706 smpA anmK FALSE 0.146 155.000 0.000 NA N NA
 5823658 5823659 HAPS_0706 HAPS_0707 anmK murQ TRUE 0.979 12.000 0.041 NA   NA
 5823659 5823660 HAPS_0707 HAPS_0708 murQ   TRUE 0.627 42.000 0.000 NA   NA
 5823660 5823661 HAPS_0708 HAPS_0709   truC TRUE 0.997 -3.000 0.518 NA   NA
 5823661 5823662 HAPS_0709 HAPS_0710 truC   TRUE 0.972 18.000 0.058 NA   NA
 5823662 5823663 HAPS_0710 HAPS_0711     TRUE 0.989 1.000 0.042 NA   NA
 5823664 5823665 HAPS_0712 HAPS_0713     TRUE 0.978 -10.000 0.124 NA   NA
 5823665 5823666 HAPS_0713 HAPS_0714   ispF FALSE 0.202 208.000 0.000 NA Y NA
 5823666 5823667 HAPS_0714 HAPS_0715 ispF ispD TRUE 0.999 5.000 0.419 1.000 Y NA
 5823667 5823668 HAPS_0715 HAPS_0716 ispD ftsB TRUE 0.995 0.000 0.185 1.000 N NA
 5823670 5823671 HAPS_0718 HAPS_0719   rseA FALSE 0.064 207.000 0.000 NA   NA
 5823671 5823672 HAPS_0719 HAPS_0720 rseA rpoE TRUE 0.995 28.000 0.705 NA N NA
 5823672 5823673 HAPS_0720 HAPS_0721 rpoE   TRUE 0.845 -7.000 0.000 NA   NA
 5823674 5823675 HAPS_0722 HAPS_0723 hsdM hsdS FALSE 0.266 276.000 0.039 0.077 Y NA
 5823675 5823676 HAPS_0723 HAPS_0724 hsdS hsdR TRUE 0.674 99.000 0.034 0.004 Y NA
 5823677 5823678 HAPS_0725 HAPS_0726 lnt corC TRUE 0.997 -3.000 0.557 1.000 N NA
 5823679 5823680 HAPS_0727 HAPS_0728     FALSE 0.015 677.000 0.000 NA   NA
 5823681 5823682 HAPS_0729 HAPS_0730 dxr   TRUE 0.647 39.000 0.000 NA   NA
 5823682 5823683 HAPS_0730 HAPS_0731     FALSE 0.073 196.000 0.000 NA   NA
 5823683 5823684 HAPS_0731 HAPS_0732   relA TRUE 0.874 13.000 0.000 NA   NA
 5823685 5823686 HAPS_0733 HAPS_0734 hemA engA FALSE 0.240 141.000 0.002 1.000   NA
 5823686 5823687 HAPS_0734 HAPS_0735 engA rfaE TRUE 0.941 13.000 0.004 1.000   NA
 5823687 5823688 HAPS_0735 HAPS_0736 rfaE surA TRUE 0.378 68.000 0.000 1.000 N NA
 5823688 5823689 HAPS_0736 HAPS_0737 surA ksgA TRUE 0.563 99.000 0.028 1.000 N NA
 5823690 5823691 HAPS_0738 HAPS_0739   murA FALSE 0.023 359.000 0.000 NA   NA
 5823691 5823692 HAPS_0739 HAPS_0740 murA bolA TRUE 0.987 24.000 0.258 NA N NA
 5823692 5823693 HAPS_0740 HAPS_0741 bolA rsbV TRUE 0.998 3.000 0.453 NA   NA
 5823693 5823694 HAPS_0741 HAPS_0742 rsbV   TRUE 0.997 8.000 0.308 NA   NA
 5823694 5823695 HAPS_0742 HAPS_0743     TRUE 0.966 37.000 0.188 NA   NA
 5823695 5823696 HAPS_0743 HAPS_0744     TRUE 0.956 73.000 0.562 NA   NA
 5823696 5823697 HAPS_0744 HAPS_0745     TRUE 0.999 0.000 0.530 NA Y NA
 5823697 5823698 HAPS_0745 HAPS_0746     FALSE 0.076 194.000 0.000 NA   NA
 5823698 5823699 HAPS_0746 HAPS_0747   gmhA TRUE 0.995 21.000 0.613 NA   NA
 5823699 5823700 HAPS_0747 HAPS_0748 gmhA   TRUE 0.996 2.000 0.187 1.000 N NA
 5823700 5823701 HAPS_0748 HAPS_0749   lppC TRUE 0.995 2.000 0.172 NA   NA
 5823702 5823703 HAPS_0750 HAPS_0751   dps FALSE 0.075 177.000 0.000 1.000   NA
 5823704 5823705 HAPS_0752 HAPS_0753   aidA FALSE 0.209 96.000 0.000 NA   NA
 5823706 5823707 HAPS_0754 HAPS_0755 purB ldhA FALSE 0.129 151.000 0.000 1.000 N NA
 5823707 5823708 HAPS_0755 HAPS_0756 ldhA sodC TRUE 0.771 25.000 0.000 1.000 N NA
 5823708 5823709 HAPS_0756 HAPS_0757 sodC lolC FALSE 0.257 86.000 0.000 1.000 N NA
 5823709 5823710 HAPS_0757 HAPS_0758 lolC   TRUE 0.845 -7.000 0.000 NA   NA
 5823710 5823711 HAPS_0758 HAPS_0759     FALSE 0.240 89.000 0.000 NA   NA
 5823712 5823713 HAPS_0760 HAPS_0761   int FALSE 0.048 234.000 0.000 NA   NA
 5823713 5823714 HAPS_0761 HAPS_0762 int engD FALSE 0.015 640.000 0.000 NA   NA
 5823714 5823715 HAPS_0762 HAPS_0763 engD pth TRUE 0.962 59.000 0.184 1.000 Y NA
 5823716 5823717 HAPS_0764 HAPS_0765 fimB hifB TRUE 0.789 23.000 0.000 NA   NA
 5823717 5823718 HAPS_0765 HAPS_0766 hifB   TRUE 0.703 31.000 0.000 NA   NA
 5823718 5823719 HAPS_0766 HAPS_0767   hifC TRUE 0.927 8.000 0.000 NA   NA
 5823722 5823723 HAPS_0770 HAPS_0771     FALSE 0.014 916.000 0.000 NA   NA
 5823723 5823724 HAPS_0771 HAPS_0772     FALSE 0.072 197.000 0.000 NA   NA
 5823724 5823725 HAPS_0772 HAPS_0773     FALSE 0.048 235.000 0.000 NA   NA
 5823725 5823726 HAPS_0773 HAPS_0774     TRUE 0.989 -25.000 0.500 NA   NA
 5823726 5823727 HAPS_0774 HAPS_0775     FALSE 0.015 723.000 0.000 NA   NA
 5823727 5823728 HAPS_0775 HAPS_0776     TRUE 0.740 -19.000 0.000 NA   NA
 5823728 5823729 HAPS_0776 HAPS_0777     FALSE 0.196 102.000 0.000 NA   NA
 5823729 5823730 HAPS_0777 HAPS_0778     TRUE 0.790 -12.000 0.000 NA   NA
 5823730 5823731 HAPS_0778 HAPS_0779     FALSE 0.034 276.000 0.000 NA   NA
 5823731 5823732 HAPS_0779 HAPS_0780     TRUE 0.823 -9.000 0.000 NA   NA
 5823732 5823733 HAPS_0780 HAPS_0781     TRUE 0.762 25.000 0.000 NA   NA
 5823733 5823734 HAPS_0781 HAPS_0782     FALSE 0.066 205.000 0.000 NA   NA
 5823734 5823735 HAPS_0782 HAPS_0783   intA TRUE 0.720 29.000 0.000 NA   NA
 5823735 5823736 HAPS_0783 HAPS_0784 intA   FALSE 0.041 255.000 0.000 NA   NA
 5823736 5823737 HAPS_0784 HAPS_0785   ubiA FALSE 0.199 100.000 0.000 NA   NA
 5823737 5823738 HAPS_0785 HAPS_0786 ubiA glpR TRUE 0.981 3.000 0.007 1.000 N NA
 5823738 5823739 HAPS_0786 HAPS_0787 glpR kdsA TRUE 0.299 77.000 0.000 1.000 N NA
 5823739 5823740 HAPS_0787 HAPS_0788 kdsA   TRUE 0.348 208.000 0.089 1.000   NA
 5823740 5823741 HAPS_0788 HAPS_0789   hemK TRUE 0.508 141.000 0.059 1.000   NA
 5823741 5823742 HAPS_0789 HAPS_0790 hemK   TRUE 0.921 9.000 0.000 NA   NA
 5823742 5823743 HAPS_0790 HAPS_0791   bsp6IM TRUE 0.996 -3.000 0.389 NA   NA
 5823743 5823744 HAPS_0791 HAPS_0792 bsp6IM prfA FALSE 0.264 85.000 0.000 1.000 N NA
 5823744 5823745 HAPS_0792 HAPS_0793 prfA hupA FALSE 0.182 115.000 0.000 1.000 N NA
 5823745 5823746 HAPS_0793 HAPS_0794 hupA   TRUE 0.823 132.000 0.355 NA   NA
 5823746 5823747 HAPS_0794 HAPS_0795   hemE TRUE 0.971 10.000 0.010 NA   NA
 5823747 5823748 HAPS_0795 HAPS_0796 hemE yeaD FALSE 0.074 198.000 0.000 1.000 N NA
 5823748 5823749 HAPS_0796 HAPS_0797 yeaD argH TRUE 0.512 54.000 0.000 1.000 N NA
 5823750 5823751 HAPS_0798 HAPS_0799 potA potB TRUE 0.998 -13.000 0.789 1.000 Y NA
 5823751 5823752 HAPS_0799 HAPS_0800 potB potC TRUE 0.998 0.000 0.286 0.039 Y NA
 5823752 5823753 HAPS_0800 HAPS_0801 potC hisS FALSE 0.032 296.000 0.000 1.000 N NA
 5823753 5823754 HAPS_0801 HAPS_0802 hisS   TRUE 0.994 10.000 0.259 1.000   NA
 5823754 5823755 HAPS_0802 HAPS_0803   proC FALSE 0.016 401.000 0.000 1.000   NA
 5823755 5823756 HAPS_0803 HAPS_0804 proC hcaT TRUE 0.978 -3.000 0.037 1.000   NA
 5823757 5823758 HAPS_0805 HAPS_0806     TRUE 0.583 47.000 0.000 NA   NA
 5823761 5823762 HAPS_0809 HAPS_0810 dinP htpX TRUE 0.535 106.000 0.024 1.000 N NA
 5823763 5823764 HAPS_0811 HAPS_0812 uvrC pgsA TRUE 0.985 24.000 0.227 1.000 N NA
 5823765 5823766 HAPS_0813 HAPS_0814 modB modC TRUE 0.999 0.000 0.537 0.002 Y NA
 5823766 5823767 HAPS_0814 HAPS_0815 modC sodA FALSE 0.164 218.000 0.000 1.000 Y NA
 5823767 5823768 HAPS_0815 HAPS_0816 sodA repA FALSE 0.016 631.000 0.000 NA   NA
 5823769 5823770 HAPS_0817 HAPS_0818     TRUE 0.539 51.000 0.000 NA   NA
 5823770 5823771 HAPS_0818 HAPS_0819     TRUE 0.934 153.000 1.000 NA   NA
 5823771 5823772 HAPS_0819 HAPS_0820     TRUE 0.977 16.000 0.065 NA   NA
 5823772 5823773 HAPS_0820 HAPS_0821     TRUE 0.987 10.000 0.065 NA   NA
 5823776 5823777 HAPS_0825 HAPS_0824     TRUE 0.678 -119.000 0.000 NA   NA
 5823777 5823778 HAPS_0824 HAPS_0826   pryE FALSE 0.014 779.000 0.000 NA   NA
 5823780 5823781 HAPS_0828 HAPS_0829   hslR TRUE 0.845 -7.000 0.000 NA   NA
 5823781 5823782 HAPS_0829 HAPS_0830 hslR hslO TRUE 0.731 110.000 0.140 1.000 N NA
 5823782 5823783 HAPS_0830 HAPS_0831 hslO dnaQ TRUE 0.345 71.000 0.000 1.000 N NA
 5823783 5823784 HAPS_0831 HAPS_0832 dnaQ   FALSE 0.196 102.000 0.000 NA   NA
 5823785 5823786 HAPS_0833 HAPS_0834 gnd   FALSE 0.068 338.000 0.005 1.000 N NA
 5823786 5823787 HAPS_0834 HAPS_0835     TRUE 0.800 52.000 0.012 NA   NA
 5823787 5823788 HAPS_0835 HAPS_0836     TRUE 0.921 9.000 0.000 NA   NA
 5823788 5823789 HAPS_0836 HAPS_0837   devB TRUE 0.647 39.000 0.000 NA   NA
 5823789 5823790 HAPS_0837 HAPS_0838 devB zwf TRUE 0.867 116.000 0.188 1.000 Y NA
 5823790 5823791 HAPS_0838 HAPS_0839 zwf cysQ TRUE 0.853 65.000 0.085 1.000 N NA
 5823793 5823794 HAPS_0841 HAPS_0842     FALSE 0.042 252.000 0.000 NA   NA
 5823797 5823798 HAPS_0845 HAPS_0846 oapA oapB TRUE 0.944 60.000 0.273 NA   NA
 5823798 5823799 HAPS_0846 HAPS_0847 oapB rfaF TRUE 0.974 9.000 0.008 NA   NA
 5823799 5823800 HAPS_0847 HAPS_0848 rfaF acpD FALSE 0.217 96.000 0.000 1.000 N NA
 5823800 5823801 HAPS_0848 HAPS_0849 acpD manB FALSE 0.103 171.000 0.000 1.000 N NA
 5823801 5823802 HAPS_0849 HAPS_0850 manB ftsJ FALSE 0.156 131.000 0.000 1.000 N NA
 5823802 5823803 HAPS_0850 HAPS_0851 ftsJ ispB FALSE 0.071 203.000 0.000 1.000 N NA
 5823803 5823804 HAPS_0851 HAPS_0852 ispB   FALSE 0.178 209.000 0.014 1.000   NA
 5823804 5823805 HAPS_0852 HAPS_0853   fabD TRUE 0.381 95.000 0.004 1.000   NA
 5823805 5823806 HAPS_0853 HAPS_0854 fabD fabG TRUE 0.882 143.000 0.432 0.006 Y NA
 5823808 5823809 HAPS_0856 HAPS_0857 brnQ mutM TRUE 0.719 57.000 0.004 1.000 N NA
 5823810 5823811 HAPS_0858 HAPS_0859 lcmt   TRUE 0.380 67.000 0.000 NA   NA
 5823811 5823812 HAPS_0859 HAPS_0860     TRUE 0.999 2.000 0.750 NA   NA
 5823812 5823813 HAPS_0860 HAPS_0861     TRUE 0.775 -13.000 0.000 NA   NA
 5823813 5823814 HAPS_0861 HAPS_0862     TRUE 0.895 -3.000 0.000 NA   NA
 5823814 5823815 HAPS_0862 HAPS_0863     TRUE 0.929 0.000 0.000 NA   NA
 5823815 5823816 HAPS_0863 HAPS_0864   gam TRUE 0.998 -3.000 0.750 NA   NA
 5823816 5823817 HAPS_0864 HAPS_0865 gam   TRUE 0.845 -7.000 0.000 NA   NA
 5823817 5823818 HAPS_0865 HAPS_0866   exeA TRUE 0.845 -7.000 0.000 NA   NA
 5823818 5823819 HAPS_0866 HAPS_0867 exeA   TRUE 0.911 43.000 0.057 1.000   NA
 5823819 5823820 HAPS_0867 HAPS_0868     FALSE 0.068 203.000 0.000 NA   NA
 5823820 5823821 HAPS_0868 HAPS_0869     TRUE 0.947 29.000 0.053 NA   NA
 5823821 5823822 HAPS_0869 HAPS_0870     TRUE 0.895 -3.000 0.000 NA   NA
 5823825 5823826 HAPS_0873 HAPS_0874     FALSE 0.027 325.000 0.000 NA   NA
 5823826 5823827 HAPS_0874 HAPS_0875     TRUE 0.566 48.000 0.000 NA   NA
 5823827 5823828 HAPS_0875 HAPS_0876     TRUE 0.997 0.000 0.333 NA   NA
 5823828 5823829 HAPS_0876 HAPS_0877     FALSE 0.218 94.000 0.000 NA   NA
 5823829 5823830 HAPS_0877 HAPS_0878     FALSE 0.198 101.000 0.000 NA   NA
 5823830 5823831 HAPS_0878 HAPS_0879     TRUE 0.895 -3.000 0.000 NA   NA
 5823831 5823832 HAPS_0879 HAPS_0880     TRUE 0.762 25.000 0.000 NA   NA
 5823832 5823833 HAPS_0880 HAPS_0881     TRUE 0.996 4.000 0.222 NA   NA
 5823833 5823834 HAPS_0881 HAPS_0882     TRUE 0.678 34.000 0.000 NA   NA
 5823834 5823835 HAPS_0882 HAPS_0883     TRUE 0.434 62.000 0.000 NA   NA
 5823835 5823836 HAPS_0883 HAPS_0884     TRUE 0.993 4.000 0.100 NA   NA
 5823836 5823837 HAPS_0884 HAPS_0885     TRUE 0.996 -3.000 0.375 NA   NA
 5823837 5823838 HAPS_0885 HAPS_0886     FALSE 0.153 127.000 0.000 NA   NA
 5823838 5823839 HAPS_0886 HAPS_0887     FALSE 0.053 221.000 0.000 NA   NA
 5823839 5823840 HAPS_0887 HAPS_0888     TRUE 0.987 36.000 0.500 NA   NA
 5823840 5823841 HAPS_0888 HAPS_0889     TRUE 0.973 67.000 0.667 NA   NA
 5823841 5823842 HAPS_0889 HAPS_0890     TRUE 0.992 3.000 0.073 NA   NA
 5823842 5823843 HAPS_0890 HAPS_0891     TRUE 0.993 0.000 0.122 NA   NA
 5823843 5823844 HAPS_0891 HAPS_0892     TRUE 0.997 10.000 0.500 NA   NA
 5823844 5823845 HAPS_0892 HAPS_0893     TRUE 0.993 0.000 0.133 NA   NA
 5823845 5823846 HAPS_0893 HAPS_0894     FALSE 0.016 565.000 0.000 NA   NA
 5823846 5823847 HAPS_0894 HAPS_0895     TRUE 0.935 5.000 0.000 NA   NA
 5823847 5823848 HAPS_0895 HAPS_0896     FALSE 0.281 80.000 0.000 NA   NA
 5823848 5823849 HAPS_0896 HAPS_0897     TRUE 0.996 -25.000 1.000 NA   NA
 5823851 5823852 HAPS_0899 HAPS_0900     TRUE 0.929 0.000 0.000 NA   NA
 5823852 5823853 HAPS_0900 HAPS_0901     TRUE 0.845 -7.000 0.000 NA   NA
 5823853 5823854 HAPS_0901 HAPS_0902     TRUE 0.939 4.000 0.000 NA   NA
 5823854 5823855 HAPS_0902 HAPS_0903     TRUE 0.993 15.000 0.333 NA   NA
 5823855 5823856 HAPS_0903 HAPS_0904     TRUE 0.938 58.000 0.222 NA   NA
 5823856 5823857 HAPS_0904 HAPS_0905     TRUE 0.972 -13.000 0.111 NA   NA
 5823857 5823858 HAPS_0905 HAPS_0906     TRUE 0.845 -7.000 0.000 NA   NA
 5823858 5823859 HAPS_0906 HAPS_0907     TRUE 0.778 24.000 0.000 NA   NA
 5823859 5823860 HAPS_0907 HAPS_0908     TRUE 0.910 10.000 0.000 NA   NA
 5823860 5823861 HAPS_0908 HAPS_0909     TRUE 0.845 -7.000 0.000 NA   NA
 5823861 5823862 HAPS_0909 HAPS_0910     FALSE 0.028 314.000 0.000 NA   NA
 5823862 5823863 HAPS_0910 HAPS_0911     TRUE 0.720 29.000 0.000 NA   NA
 5823863 5823864 HAPS_0911 HAPS_0912     FALSE 0.108 161.000 0.000 NA   NA
 5823865 5823866 HAPS_0913 HAPS_0914 znuA pssA FALSE 0.148 138.000 0.000 1.000 N NA
 5823868 5823869 HAPS_0916 HAPS_0917 ileS   TRUE 0.397 60.000 0.000 1.000   NA
 5823869 5823870 HAPS_0917 HAPS_0918     TRUE 0.939 4.000 0.000 NA   NA
 5823870 5823871 HAPS_0918 HAPS_0919   ribF TRUE 0.941 2.000 0.000 NA   NA
 5823873 5823874 HAPS_0921 HAPS_0922     TRUE 0.396 65.000 0.000 NA   NA
 5823874 5823875 HAPS_0922 HAPS_0923     FALSE 0.098 173.000 0.000 NA   NA
 5823877 5823878 HAPS_0925 HAPS_0926     FALSE 0.112 159.000 0.000 NA   NA
 5823880 5823881 HAPS_0928 HAPS_0929   bolA FALSE 0.182 111.000 0.000 NA   NA
 5823882 5823883 HAPS_0930 HAPS_0931 pflA   FALSE 0.154 237.000 0.013 NA   NA
 5823883 5823884 HAPS_0931 HAPS_0932     TRUE 0.985 1.000 0.019 NA   NA
 5823884 5823885 HAPS_0932 HAPS_0933   rusA TRUE 0.997 0.000 0.263 NA N NA
 5823887 5823888 HAPS_0935 HAPS_0936 rumA dppA FALSE 0.035 279.000 0.000 1.000 N NA
 5823888 5823889 HAPS_0936 HAPS_0937 dppA dppB TRUE 0.381 94.000 0.000 0.038 Y NA
 5823889 5823890 HAPS_0937 HAPS_0938 dppB dppC TRUE 0.997 29.000 0.779 0.038 Y NA
 5823890 5823891 HAPS_0938 HAPS_0939 dppC dppD TRUE 0.999 11.000 0.560 1.000 Y NA
 5823891 5823892 HAPS_0939 HAPS_0940 dppD dppF TRUE 0.996 15.000 0.377 0.002 Y NA
 5823893 5823894 HAPS_0941 HAPS_0942 ruvC uvrA TRUE 0.587 74.000 0.007 NA   NA
 5823894 5823895 HAPS_0942 HAPS_0943 uvrA aspS TRUE 0.385 118.000 0.007 NA   NA
 5823895 5823896 HAPS_0943 HAPS_0944 aspS ntpA TRUE 0.478 139.000 0.035 NA   NA
 5823897 5823898 HAPS_0945 HAPS_0946   folP FALSE 0.041 226.000 0.000 1.000   NA
 5823898 5823899 HAPS_0946 HAPS_0947 folP arsC TRUE 0.946 15.000 0.005 1.000 N NA
 5823899 5823900 HAPS_0947 HAPS_0948 arsC coaE FALSE 0.257 86.000 0.000 1.000 N NA
 5823900 5823901 HAPS_0948 HAPS_0949 coaE yacG TRUE 0.987 4.000 0.033 1.000   NA
 5823902 5823903 HAPS_0950 HAPS_0951 holA rlpB TRUE 0.996 5.000 0.199 NA N NA
 5823903 5823904 HAPS_0951 HAPS_0952 rlpB leuS TRUE 0.852 83.000 0.182 NA N NA
 5823905 5823906 HAPS_0953 HAPS_0954   thrS FALSE 0.066 190.000 0.000 1.000   NA
 5823906 5823907 HAPS_0954 HAPS_0955 thrS   FALSE 0.044 245.000 0.000 NA   NA
 5823907 5823908 HAPS_0955 HAPS_0956   sclB8 FALSE 0.022 374.000 0.000 NA   NA
 5823909 5823910 HAPS_0957 HAPS_0958   crr FALSE 0.178 191.000 0.003 1.000 N NA
 5823910 5823911 HAPS_0958 HAPS_0959 crr ptsI TRUE 0.886 74.000 0.139 0.005 Y NA
 5823911 5823912 HAPS_0959 HAPS_0960 ptsI ptsH TRUE 0.804 96.000 0.121 0.005 Y NA
 5823915 5823916 HAPS_0963 HAPS_0964     FALSE 0.022 372.000 0.000 NA   NA
 5823916 5823917 HAPS_0964 HAPS_0965   lpxB TRUE 0.544 50.000 0.000 NA   NA
 5823918 5823919 HAPS_0966 HAPS_0967 secF secD TRUE 0.995 11.000 0.206 0.001 Y NA
 5823919 5823920 HAPS_0967 HAPS_0968 secD yajC TRUE 0.924 62.000 0.045 NA Y NA
 5823922 5823923 HAPS_0970 HAPS_0971 argG gpmA FALSE 0.085 190.000 0.000 1.000 N NA
 5823923 5823924 HAPS_0971 HAPS_0972 gpmA kdsB FALSE 0.115 160.000 0.000 1.000 N NA
 5823924 5823925 HAPS_0972 HAPS_0973 kdsB   TRUE 0.921 9.000 0.000 NA   NA
 5823925 5823926 HAPS_0973 HAPS_0974     TRUE 0.921 9.000 0.000 NA   NA
 5823927 5823928 HAPS_0975 HAPS_0976 tktA waaQ FALSE 0.172 74.000 0.000 0.029 N NA
 5823928 5823929 HAPS_0976 HAPS_0977 waaQ   FALSE 0.158 105.000 0.000 1.000   NA
 5823929 5823930 HAPS_0977 HAPS_0978   rfbB FALSE 0.138 118.000 0.000 1.000   NA
 5823931 5823932 HAPS_0979 HAPS_0980   argR TRUE 0.992 0.000 0.118 1.000   NA
 5823933 5823934 HAPS_0981 HAPS_0982 mdh   FALSE 0.249 89.000 0.000 1.000 N NA
 5823934 5823935 HAPS_0982 HAPS_0983   trxB TRUE 0.942 39.000 0.012 1.000 Y NA
 5823937 5823938 HAPS_0985 HAPS_0986 rrmJ   FALSE 0.268 83.000 0.000 NA   NA
 5823938 5823939 HAPS_0986 HAPS_0987     FALSE 0.016 553.000 0.000 NA   NA
 5823939 5823940 HAPS_0987 HAPS_0988     FALSE 0.240 89.000 0.000 NA   NA
 5823940 5823941 HAPS_0988 HAPS_0989     FALSE 0.021 390.000 0.000 NA   NA
 5823943 5823944 HAPS_0991 HAPS_0992     TRUE 0.321 73.000 0.000 NA   NA
 5823944 5823945 HAPS_0992 HAPS_0993   cyaA FALSE 0.118 155.000 0.000 NA   NA
 5823945 5823946 HAPS_0993 HAPS_0994 cyaA kefB TRUE 0.976 15.000 0.049 1.000 N NA
 5823946 5823947 HAPS_0994 HAPS_0995 kefB ruvB FALSE 0.123 155.000 0.000 1.000 N NA
 5823947 5823948 HAPS_0995 HAPS_0996 ruvB oppA FALSE 0.090 183.000 0.000 1.000 N NA
 5823948 5823949 HAPS_0996 HAPS_0997 oppA oppB TRUE 0.714 95.000 0.034 0.037 Y NA
 5823949 5823950 HAPS_0997 HAPS_0998 oppB oppC TRUE 0.999 11.000 0.870 0.037 Y NA
 5823950 5823951 HAPS_0998 HAPS_0999 oppC oppD TRUE 0.963 12.000 0.014 1.000   NA
 5823953 5823954 HAPS_1001 HAPS_1002 malT   FALSE 0.065 206.000 0.000 NA   NA
 5823955 5823956 HAPS_1003 HAPS_1004 hemY hemX TRUE 0.999 11.000 0.765 1.000 Y NA
 5823956 5823957 HAPS_1004 HAPS_1005 hemX hemD TRUE 0.998 18.000 0.600 1.000 Y NA
 5823957 5823958 HAPS_1005 HAPS_1006 hemD hemC TRUE 0.997 2.000 0.205 0.003 Y NA
 5823964 5823965 HAPS_1012 HAPS_1013 rumB nagZ TRUE 0.960 -7.000 0.019 1.000 N NA
 5823965 5823966 HAPS_1013 HAPS_1014 nagZ   TRUE 0.804 22.000 0.000 1.000 N NA
 5823966 5823967 HAPS_1014 HAPS_1015   upp FALSE 0.054 225.000 0.000 1.000 N NA
 5823967 5823968 HAPS_1015 HAPS_1016 upp ilvY TRUE 0.446 62.000 0.000 1.000 N NA
 5823968 5823969 HAPS_1016 HAPS_1017 ilvY lbgB FALSE 0.264 85.000 0.000 1.000 N NA
 5823969 5823970 HAPS_1017 HAPS_1018 lbgB   TRUE 0.895 -3.000 0.000 NA   NA
 5823970 5823971 HAPS_1018 HAPS_1019     TRUE 0.720 -24.000 0.000 NA   NA
 5823971 5823972 HAPS_1019 HAPS_1020   lbgA TRUE 0.994 27.000 0.333 1.000 Y NA
 5823972 5823973 HAPS_1020 HAPS_1021 lbgA   TRUE 0.982 3.000 0.000 1.000 Y NA
 5823973 5823974 HAPS_1021 HAPS_1022     TRUE 0.894 -10.000 0.000 0.013 Y NA
 5823974 5823975 HAPS_1022 HAPS_1023   lpsA TRUE 0.981 4.000 0.000 1.000 Y NA
 5823975 5823976 HAPS_1023 HAPS_1024 lpsA   FALSE 0.052 224.000 0.000 NA   NA
 5823976 5823977 HAPS_1024 HAPS_1025     TRUE 0.895 -3.000 0.000 NA   NA
 5823977 5823978 HAPS_1025 HAPS_1026   rpmE FALSE 0.184 110.000 0.000 NA   NA
 5823979 5823980 HAPS_1027 HAPS_1028   genX FALSE 0.057 198.000 0.000 1.000   NA
 5823980 5823981 HAPS_1028 HAPS_1029 genX tatD FALSE 0.225 110.000 0.000 NA N NA
 5823981 5823982 HAPS_1029 HAPS_1030 tatD   TRUE 0.377 140.000 0.013 NA   NA
 5823982 5823983 HAPS_1030 HAPS_1031   lpxH TRUE 0.426 106.000 0.008 NA   NA
 5823983 5823984 HAPS_1031 HAPS_1032 lpxH vimF TRUE 0.938 1.000 0.000 NA   NA
 5823987 5823988 HAPS_1035 HAPS_1036 rpoZ talB FALSE 0.024 362.000 0.000 1.000 N NA
 5823988 5823989 HAPS_1036 HAPS_1037 talB ampG FALSE 0.175 115.000 0.000 NA   NA
 5823989 5823990 HAPS_1037 HAPS_1038 ampG galE TRUE 0.995 3.000 0.160 NA   NA
 5823990 5823991 HAPS_1038 HAPS_1039 galE rluB TRUE 0.408 65.000 0.000 1.000 N NA
 5823992 5823993 HAPS_1040 HAPS_1041   recR TRUE 0.970 67.000 0.604 NA   NA
 5823993 5823994 HAPS_1041 HAPS_1042 recR pyrG FALSE 0.190 111.000 0.000 1.000 N NA
 5823995 5823996 HAPS_1043 HAPS_1044 serA rpiA TRUE 0.790 63.000 0.029 1.000 N NA
 5823996 5823997 HAPS_1044 HAPS_1045 rpiA mrsA TRUE 0.629 99.000 0.004 1.000 Y NA
 5823997 5823998 HAPS_1045 HAPS_1046 mrsA ilvA TRUE 0.970 7.000 0.003 1.000 N NA
 5823998 5823999 HAPS_1046 HAPS_1047 ilvA slyD TRUE 0.935 19.000 0.006 1.000 N NA
 5823999 5824000 HAPS_1047 HAPS_1048 slyD   FALSE 0.168 118.000 0.000 NA   NA
 5824000 5824001 HAPS_1048 HAPS_1049     TRUE 0.921 9.000 0.000 NA   NA
 5824001 5824002 HAPS_1049 HAPS_1050     TRUE 0.829 52.000 0.019 NA   NA
 5824004 5824005 HAPS_1052 HAPS_1054   lpxK TRUE 0.982 -19.000 0.263 NA   NA
 5824006 5824007 HAPS_1053 HAPS_1055   hugX FALSE 0.116 156.000 0.000 NA   NA
 5824007 5824008 HAPS_1055 HAPS_1056 hugX hugZ TRUE 0.998 14.000 0.355 NA Y NA
 5824009 5824010 HAPS_1057 HAPS_1058 glpK glpF TRUE 0.607 74.000 0.010 1.000 N NA
 5824010 5824011 HAPS_1058 HAPS_1059 glpF wecG FALSE 0.081 193.000 0.000 1.000 N NA
 5824011 5824012 HAPS_1059 HAPS_1060 wecG   TRUE 0.981 -7.000 0.126 1.000   NA
 5824012 5824013 HAPS_1060 HAPS_1061   wecF TRUE 0.990 41.000 0.684 1.000   NA
 5824015 5824016 HAPS_1063 HAPS_1064 artM artQ TRUE 0.999 0.000 0.714 0.037 Y NA
 5824016 5824017 HAPS_1064 HAPS_1065 artQ artI TRUE 0.916 48.000 0.026 0.049 Y NA
 5824017 5824018 HAPS_1065 HAPS_1066 artI artP TRUE 0.965 32.000 0.032 1.000 Y NA
 5824020 5824021 HAPS_1068 HAPS_1069 rplI rpsR TRUE 0.996 19.000 0.499 0.022 Y NA
 5824021 5824022 HAPS_1069 HAPS_1070 rpsR priB TRUE 0.989 12.000 0.128 1.000 N NA
 5824022 5824023 HAPS_1070 HAPS_1071 priB rpsF TRUE 0.974 -13.000 0.122 1.000 N NA
 5824025 5824026 HAPS_1073 HAPS_1074 licA   TRUE 0.986 0.000 0.032 NA   NA
 5824026 5824027 HAPS_1074 HAPS_1075     TRUE 0.991 2.000 0.051 NA   NA
 5824028 5824029 HAPS_1076 HAPS_1077     FALSE 0.040 259.000 0.000 NA   NA
 5824031 5824032 HAPS_1079 HAPS_1080 nqrA nqrB TRUE 0.999 5.000 0.854 0.004 Y NA
 5824032 5824033 HAPS_1080 HAPS_1081 nqrB nqrC TRUE 0.998 -7.000 0.603 0.004 Y NA
 5824033 5824034 HAPS_1081 HAPS_1082 nqrC nqrD TRUE 0.998 0.000 0.312 0.004 Y NA
 5824034 5824035 HAPS_1082 HAPS_1083 nqrD nqrE TRUE 0.997 2.000 0.188 0.004 Y NA
 5824035 5824036 HAPS_1083 HAPS_1084 nqrE nqrF TRUE 0.998 13.000 0.551 0.004 Y NA
 5824036 5824037 HAPS_1084 HAPS_1085 nqrF   FALSE 0.278 81.000 0.000 NA   NA
 5824037 5824038 HAPS_1085 HAPS_1086   dnaN TRUE 0.998 -3.000 0.667 NA   NA
 5824040 5824041 HAPS_1088 HAPS_1089 nrfA nrfB TRUE 0.996 21.000 1.000 0.002   NA
 5824041 5824042 HAPS_1089 HAPS_1090 nrfB nrfC TRUE 0.988 -3.000 0.220 0.002   NA
 5824042 5824043 HAPS_1090 HAPS_1091 nrfC nrfD TRUE 0.999 0.000 0.927 0.002 N NA
 5824043 5824044 HAPS_1091 HAPS_1092 nrfD   FALSE 0.225 110.000 0.000 NA N NA
 5824046 5824047 HAPS_1094 HAPS_1095 aphA infA TRUE 0.405 96.000 0.004 NA   NA
 5824047 5824048 HAPS_1095 HAPS_1096 infA engC FALSE 0.068 186.000 0.000 1.000   NA
 5824048 5824049 HAPS_1096 HAPS_1097 engC yfeA FALSE 0.063 192.000 0.000 1.000   NA
 5824049 5824050 HAPS_1097 HAPS_1098 yfeA yfeB TRUE 0.993 63.000 0.894 1.000 Y NA
 5824050 5824051 HAPS_1098 HAPS_1099 yfeB yfeC TRUE 1.000 4.000 0.857 1.000 Y NA
 5824051 5824052 HAPS_1099 HAPS_1100 yfeC yfeD TRUE 0.999 0.000 0.525 0.005 Y NA
 5824053 5824054 HAPS_1101 HAPS_1102     TRUE 0.327 72.000 0.000 NA   NA
 5824054 5824055 HAPS_1102 HAPS_1103     TRUE 0.703 31.000 0.000 NA   NA
 5824058 5824059 HAPS_1106 HAPS_1107 oadB phnA FALSE 0.161 121.000 0.000 NA   NA
 5824059 5824060 HAPS_1107 HAPS_1108 phnA purN TRUE 0.307 76.000 0.000 1.000 N NA
 5824060 5824061 HAPS_1108 HAPS_1109 purN aspA FALSE 0.065 208.000 0.000 1.000 N NA
 5824066 5824067 HAPS_1114 HAPS_1115   oppF FALSE 0.018 456.000 0.000 NA   NA
 5824067 5824068 HAPS_1115 HAPS_1116 oppF oppCD TRUE 0.991 4.000 0.132 0.003 N NA
 5824068 5824069 HAPS_1116 HAPS_1117 oppCD oppB TRUE 0.988 0.000 0.075 0.072 N NA
 5824069 5824070 HAPS_1117 HAPS_1118 oppB oppA TRUE 0.688 211.000 0.299 0.037 Y NA
 5824070 5824071 HAPS_1118 HAPS_1119 oppA rnhA FALSE 0.051 232.000 0.000 1.000 N NA
 5824071 5824072 HAPS_1119 HAPS_1120 rnhA purU TRUE 0.936 6.000 0.000 1.000 N NA
 5824072 5824073 HAPS_1120 HAPS_1121 purU hns TRUE 0.641 96.000 0.064 1.000   NA
 5824074 5824075 HAPS_1122 HAPS_1123   nfrE FALSE 0.205 118.000 0.000 NA N NA
 5824075 5824076 HAPS_1123 HAPS_1124 nfrE dsbE TRUE 0.993 -3.000 0.071 1.000 Y NA
 5824076 5824077 HAPS_1124 HAPS_1125 dsbE ccmH TRUE 0.995 -3.000 0.115 NA Y NA
 5824077 5824078 HAPS_1125 HAPS_1126 ccmH nrfG TRUE 0.998 -7.000 0.464 NA Y NA
 5824079 5824080 HAPS_1127 HAPS_1128 fbpC fbpB TRUE 0.996 2.000 0.303 0.037 N NA
 5824080 5824081 HAPS_1128 HAPS_1129 fbpB fbpA TRUE 0.815 178.000 0.374 0.037 Y NA
 5824083 5824084 HAPS_1131 HAPS_1132 rpsO nhaP FALSE 0.290 132.000 0.002 1.000 N NA
 5824085 5824086 HAPS_1133 HAPS_1134 ppiD ribD FALSE 0.019 451.000 0.000 1.000 N NA
 5824086 5824087 HAPS_1134 HAPS_1135 ribD ribE TRUE 0.999 2.000 0.456 1.000 Y NA
 5824087 5824088 HAPS_1135 HAPS_1136 ribE ribA TRUE 0.727 132.000 0.051 1.000 Y NA
 5824088 5824089 HAPS_1136 HAPS_1137 ribA ribH TRUE 0.437 196.000 0.054 0.002 Y NA
 5824090 5824091 HAPS_1138 HAPS_1139     TRUE 0.999 0.000 0.771 1.000   NA
 5824091 5824092 HAPS_1139 HAPS_1140     TRUE 0.529 52.000 0.000 NA   NA
 5824094 5824095 HAPS_1142 HAPS_1143     TRUE 0.762 25.000 0.000 NA   NA
 5824095 5824096 HAPS_1143 HAPS_1144   folD FALSE 0.196 107.000 0.000 1.000 N NA
 5824097 5824098 HAPS_1145 HAPS_1146     TRUE 0.638 40.000 0.000 NA   NA
 5824099 5824100 HAPS_1147 HAPS_1148 int   FALSE 0.030 299.000 0.000 NA   NA
 5824100 5824101 HAPS_1148 HAPS_1149     FALSE 0.021 386.000 0.000 NA   NA
 5824101 5824102 HAPS_1149 HAPS_1150     FALSE 0.240 89.000 0.000 NA   NA
 5824102 5824103 HAPS_1150 HAPS_1151     TRUE 0.752 -16.000 0.000 NA   NA
 5824103 5824104 HAPS_1151 HAPS_1152     FALSE 0.037 269.000 0.000 NA   NA
 5824106 5824107 HAPS_1154 HAPS_1155     TRUE 0.778 24.000 0.000 NA   NA
 5824109 5824110 HAPS_1157 HAPS_1158 exo bet TRUE 0.981 -3.000 0.040 NA   NA
 5824110 5824111 HAPS_1158 HAPS_1159 bet   TRUE 0.984 10.000 0.040 NA   NA
 5824111 5824112 HAPS_1159 HAPS_1160     TRUE 0.921 9.000 0.000 NA   NA
 5824112 5824113 HAPS_1160 HAPS_1161     TRUE 0.539 51.000 0.000 NA   NA
 5824114 5824115 HAPS_1162 HAPS_1163     TRUE 0.434 62.000 0.000 NA   NA
 5824116 5824117 HAPS_1164 HAPS_1165   zapA FALSE 0.229 225.000 0.034 NA   NA
 5824119 5824120 HAPS_1167 HAPS_1168 nrdD nrdG TRUE 0.984 -3.000 0.071 1.000   NA
 5824120 5824121 HAPS_1168 HAPS_1169 nrdG trpG FALSE 0.077 175.000 0.000 1.000   NA
 5824121 5824122 HAPS_1169 HAPS_1170 trpG rmuC TRUE 0.986 0.000 0.032 NA   NA
 5824123 5824124 HAPS_1171 HAPS_1172 hemB   FALSE 0.064 209.000 0.000 1.000 N NA
 5824124 5824125 HAPS_1172 HAPS_1173   aslB TRUE 0.993 7.000 0.154 1.000   NA
 5824126 5824127 HAPS_1174 HAPS_1175 hepA pgi FALSE 0.110 164.000 0.000 1.000 N NA
 5824127 5824128 HAPS_1175 HAPS_1176 pgi   TRUE 0.940 19.000 0.010 NA   NA
 5824128 5824129 HAPS_1176 HAPS_1177     FALSE 0.168 118.000 0.000 NA   NA
 5824129 5824130 HAPS_1177 HAPS_1178     TRUE 0.583 47.000 0.000 NA   NA
 5824130 5824131 HAPS_1178 HAPS_1179     TRUE 0.762 25.000 0.000 NA   NA
 5824131 5824132 HAPS_1179 HAPS_1180     TRUE 0.939 4.000 0.000 NA   NA
 5824132 5824133 HAPS_1180 HAPS_1181   aroE FALSE 0.086 183.000 0.000 NA   NA
 5824133 5824134 HAPS_1181 HAPS_1182 aroE sua5 TRUE 0.994 4.000 0.087 NA N NA
 5824134 5824135 HAPS_1182 HAPS_1183 sua5   TRUE 0.993 0.000 0.099 NA N NA
 5824135 5824136 HAPS_1183 HAPS_1184     TRUE 0.988 8.000 0.048 NA   NA
 5824136 5824137 HAPS_1184 HAPS_1185   recX TRUE 0.938 -7.000 0.004 NA   NA
 5824137 5824138 HAPS_1185 HAPS_1186 recX recA TRUE 0.954 53.000 0.296 1.000   NA
 5824138 5824139 HAPS_1186 HAPS_1187 recA   TRUE 0.305 133.000 0.003 1.000 N NA
 5824139 5824140 HAPS_1187 HAPS_1188   pabB TRUE 0.990 -22.000 0.219 1.000 Y NA
 5824141 5824142 HAPS_1189 HAPS_1190     TRUE 0.807 -10.000 0.000 NA   NA
 5824142 5824143 HAPS_1190 HAPS_1191   tehB FALSE 0.175 115.000 0.000 NA   NA
 5824143 5824144 HAPS_1191 HAPS_1192 tehB dusA FALSE 0.036 276.000 0.000 1.000 N NA
 5824144 5824145 HAPS_1192 HAPS_1193 dusA   FALSE 0.020 408.000 0.000 NA   NA
 5824146 5824147 HAPS_1194 HAPS_1195 rpoD dnaG TRUE 0.851 99.000 0.299 1.000 N NA
 5824147 5824148 HAPS_1195 HAPS_1196 dnaG rpsU TRUE 0.555 144.000 0.067 1.000 N NA
 5824148 5824149 HAPS_1196 HAPS_1197 rpsU   FALSE 0.016 559.000 0.000 NA   NA
 5824149 5824150 HAPS_1197 HAPS_1198   rne FALSE 0.224 93.000 0.000 NA   NA
 5824150 5824151 HAPS_1198 HAPS_1199 rne mpl FALSE 0.027 332.000 0.000 1.000 N NA
 5824152 5824153 HAPS_1200 HAPS_1201 fbp   TRUE 0.751 26.000 0.000 NA   NA
 5824153 5824154 HAPS_1201 HAPS_1202   hbpA TRUE 0.895 -3.000 0.000 NA   NA
 5824154 5824155 HAPS_1202 HAPS_1203 hbpA scrR FALSE 0.156 131.000 0.000 1.000 N NA
 5824155 5824156 HAPS_1203 HAPS_1204 scrR tyrR FALSE 0.223 153.000 0.000 0.028 Y NA
 5824156 5824157 HAPS_1204 HAPS_1205 tyrR sapA TRUE 0.991 -3.000 0.034 1.000 Y NA
 5824157 5824158 HAPS_1205 HAPS_1206 sapA sapB TRUE 0.991 2.000 0.103 0.036 N NA
 5824158 5824159 HAPS_1206 HAPS_1207 sapB psd FALSE 0.087 188.000 0.000 1.000 N NA
 5824159 5824160 HAPS_1207 HAPS_1208 psd dsbE TRUE 0.595 47.000 0.000 1.000 N NA
 5824160 5824161 HAPS_1208 HAPS_1209 dsbE ccmH_1 TRUE 0.999 0.000 0.578 NA Y NA
 5824161 5824162 HAPS_1209 HAPS_1210 ccmH_1 ccmH_2 TRUE 1.000 0.000 0.727 NA Y NA
 5824162 5824163 HAPS_1210 HAPS_1211 ccmH_2 miaA TRUE 0.695 33.000 0.000 1.000 N NA
 5824163 5824164 HAPS_1211 HAPS_1212 miaA hfq TRUE 0.736 55.000 0.009 1.000   NA
 5824164 5824165 HAPS_1212 HAPS_1213 hfq hflX FALSE 0.227 155.000 0.003 1.000   NA
 5824165 5824166 HAPS_1213 HAPS_1214 hflX gph TRUE 0.415 57.000 0.000 1.000   NA
 5824167 5824168 HAPS_1215 HAPS_1216 nanK nanE TRUE 0.999 2.000 0.286 1.000 Y NA
 5824168 5824169 HAPS_1216 HAPS_1217 nanE idgA FALSE 0.102 190.000 0.000 NA N NA
 5824169 5824170 HAPS_1217 HAPS_1218 idgA   TRUE 0.982 -7.000 0.085 NA N NA
 5824170 5824171 HAPS_1218 HAPS_1219     FALSE 0.091 178.000 0.000 NA   NA
 5824172 5824173 HAPS_1220 HAPS_1221   deoC TRUE 0.498 91.000 0.000 1.000 Y NA
 5824173 5824174 HAPS_1221 HAPS_1222 deoC deoD TRUE 0.959 29.000 0.014 1.000 Y NA
 5824176 5824177 HAPS_1224 HAPS_1225 argS   FALSE 0.018 455.000 0.000 NA   NA
 5824177 5824178 HAPS_1225 HAPS_1226     TRUE 0.334 71.000 0.000 NA   NA
 5824179 5824180 HAPS_1227 HAPS_1228 tuf   FALSE 0.047 237.000 0.000 NA   NA
 5824180 5824181 HAPS_1228 HAPS_1229     TRUE 0.939 4.000 0.000 NA   NA
 5824181 5824182 HAPS_1229 HAPS_1230     TRUE 0.618 43.000 0.000 NA   NA
 5824182 5824183 HAPS_1230 HAPS_1231     TRUE 0.703 31.000 0.000 NA   NA
 5824183 5824184 HAPS_1231 HAPS_1233     FALSE 0.151 130.000 0.000 NA   NA
 5824185 5824186 HAPS_1232 HAPS_1234 coaA pssA TRUE 0.927 3.000 0.000 1.000   NA
 5824187 5824188 HAPS_1235 HAPS_1236 lipA lipB TRUE 0.996 13.000 0.319 0.001 Y NA
 5824188 5824189 HAPS_1236 HAPS_1237 lipB   TRUE 0.921 64.000 0.219 NA   NA
 5824189 5824190 HAPS_1237 HAPS_1238   dacA TRUE 0.420 114.000 0.010 NA   NA
 5824190 5824191 HAPS_1238 HAPS_1239 dacA rlpA TRUE 0.986 15.000 0.023 NA Y NA
 5824191 5824192 HAPS_1239 HAPS_1240 rlpA rodA TRUE 0.926 28.000 0.014 NA N NA
 5824192 5824193 HAPS_1240 HAPS_1241 rodA ftsI TRUE 0.299 176.000 0.016 1.000 N NA
 5824193 5824194 HAPS_1241 HAPS_1242 ftsI   TRUE 0.980 7.000 0.013 NA   NA
 5824194 5824195 HAPS_1242 HAPS_1243     TRUE 0.980 34.000 0.307 NA   NA
 5824196 5824197 HAPS_1244 HAPS_1245     TRUE 0.927 8.000 0.000 NA   NA
 5824197 5824198 HAPS_1245 HAPS_1246   sfsA FALSE 0.218 94.000 0.000 NA   NA
 5824200 5824201 HAPS_1248 HAPS_1249 hslV hslU TRUE 0.978 90.000 0.752 1.000 Y NA
 5824201 5824202 HAPS_1249 HAPS_1250 hslU menD FALSE 0.155 132.000 0.000 1.000 N NA
 5824202 5824203 HAPS_1250 HAPS_1251 menD yfbB TRUE 0.978 39.000 0.355 1.000   NA
 5824203 5824204 HAPS_1251 HAPS_1252 yfbB accD TRUE 0.921 9.000 0.000 NA   NA
 5824207 5824208 HAPS_1255 HAPS_1256 priA   TRUE 0.912 0.000 0.000 1.000   NA
 5824208 5824209 HAPS_1256 HAPS_1257     TRUE 0.998 0.000 0.600 0.070   NA
 5824209 5824210 HAPS_1257 HAPS_1258   alaT FALSE 0.186 194.000 0.008 1.000   NA
 5824211 5824212 HAPS_1259 HAPS_1260 menF pgpB FALSE 0.025 292.000 0.000 1.000   NA
 5824212 5824213 HAPS_1260 HAPS_1261 pgpB nagK TRUE 0.992 3.000 0.091 1.000   NA
 5824213 5824214 HAPS_1261 HAPS_1262 nagK gloB FALSE 0.210 167.000 0.004 1.000   NA
 5824214 5824215 HAPS_1262 HAPS_1263 gloB uppS FALSE 0.219 157.000 0.003 1.000   NA
 5824215 5824216 HAPS_1263 HAPS_1264 uppS cdsA TRUE 0.997 18.000 0.400 1.000 Y NA
 5824216 5824217 HAPS_1264 HAPS_1265 cdsA yaeL TRUE 0.989 10.000 0.080 1.000 N NA
 5824217 5824218 HAPS_1265 HAPS_1266 yaeL ompD15 TRUE 0.975 51.000 0.204 1.000 Y NA
 5824218 5824219 HAPS_1266 HAPS_1267 ompD15 omp26 TRUE 0.591 75.000 0.000 1.000 Y NA
 5824219 5824220 HAPS_1267 HAPS_1268 omp26 lpxD TRUE 0.978 0.000 0.000 1.000 Y NA
 5824220 5824221 HAPS_1268 HAPS_1269 lpxD fabZ TRUE 0.997 19.000 0.796 1.000 N NA
 5824221 5824222 HAPS_1269 HAPS_1270 fabZ lpxA TRUE 0.996 28.000 0.850 1.000 N NA
 5824222 5824223 HAPS_1270 HAPS_1271 lpxA thrA FALSE 0.021 391.000 0.000 1.000 N NA
 5824223 5824224 HAPS_1271 HAPS_1272 thrA thrB TRUE 0.862 97.000 0.133 1.000 Y NA
 5824225 5824226 HAPS_1273 HAPS_1274 tyrA aroF TRUE 0.995 2.000 0.030 1.000 Y NA
 5824226 5824227 HAPS_1274 HAPS_1275 aroF opsX TRUE 0.397 151.000 0.023 1.000 N NA
 5824227 5824228 HAPS_1275 HAPS_1276 opsX   TRUE 0.937 9.000 0.000 NA N NA
 5824228 5824229 HAPS_1276 HAPS_1277   ushA FALSE 0.261 84.000 0.000 NA   NA
 5824229 5824230 HAPS_1277 HAPS_1278 ushA   FALSE 0.029 302.000 0.000 NA   NA
 5824230 5824231 HAPS_1278 HAPS_1279   rcnA TRUE 0.350 203.000 0.080 1.000   NA
 5824231 5824232 HAPS_1279 HAPS_1280 rcnA rcnB TRUE 0.978 -9.000 0.100 NA   NA
 5824232 5824233 HAPS_1280 HAPS_1281 rcnB prlC FALSE 0.015 677.000 0.000 NA   NA
 5824237 5824238 HAPS_1285 HAPS_1286 accC accB TRUE 0.922 76.000 0.275 0.001 Y NA
 5824240 5824241 HAPS_1288 HAPS_1289 aroQ bioB FALSE 0.233 160.000 0.003 1.000 N NA
 5824241 5824242 HAPS_1289 HAPS_1290 bioB dapD TRUE 0.718 56.000 0.004 1.000 N NA
 5824242 5824243 HAPS_1290 HAPS_1291 dapD   TRUE 0.727 -22.000 0.000 NA   NA
 5824244 5824245 HAPS_1292 HAPS_1293   rpmF TRUE 0.995 21.000 0.599 NA   NA
 5824245 5824246 HAPS_1293 HAPS_1294 rpmF plsX TRUE 0.966 57.000 0.418 1.000 N NA
 5824246 5824247 HAPS_1294 HAPS_1295 plsX dat FALSE 0.034 286.000 0.000 1.000 N NA
 5824247 5824248 HAPS_1295 HAPS_1296 dat ddc TRUE 0.992 -28.000 0.459 0.013 Y NA
 5824248 5824249 HAPS_1296 HAPS_1297 ddc ppnK FALSE 0.041 261.000 0.000 1.000 N NA
 5824251 5824252 HAPS_1299 HAPS_1300   murB TRUE 0.939 4.000 0.000 NA   NA
 5824252 5824253 HAPS_1300 HAPS_1301 murB birA TRUE 0.996 7.000 0.211 1.000 N NA
 5824253 5824254 HAPS_1301 HAPS_1302 birA   FALSE 0.069 202.000 0.000 NA   NA
 5824254 5824255 HAPS_1302 HAPS_1303   mogA TRUE 0.529 52.000 0.000 NA   NA
 5824255 5824256 HAPS_1303 HAPS_1304 mogA glnB TRUE 0.982 9.000 0.022 1.000 N NA
 5824256 5824257 HAPS_1304 HAPS_1305 glnB lspA TRUE 0.983 9.000 0.026 1.000 N NA
 5824257 5824258 HAPS_1305 HAPS_1306 lspA ispH TRUE 0.997 1.000 0.095 1.000 Y NA
 5824258 5824259 HAPS_1306 HAPS_1307 ispH   TRUE 0.977 0.000 0.008 NA   NA
 5824259 5824260 HAPS_1307 HAPS_1308   mutY FALSE 0.026 327.000 0.000 NA   NA
 5824260 5824261 HAPS_1308 HAPS_1309 mutY yggX TRUE 0.983 -10.000 0.150 NA N NA
 5824261 5824262 HAPS_1309 HAPS_1310 yggX mltC TRUE 0.984 11.000 0.043 NA N NA
 5824264 5824265 HAPS_1312 HAPS_1313     TRUE 0.820 19.000 0.000 NA   NA
 5824266 5824267 HAPS_1314 HAPS_1315 glpC glpB TRUE 0.998 2.000 0.547 0.002 N NA
 5824267 5824268 HAPS_1315 HAPS_1316 glpB glpA TRUE 0.994 -10.000 0.650 0.002 N NA
 5824269 5824270 HAPS_1317 HAPS_1318 glpT glpQ TRUE 0.434 62.000 0.000 NA   NA
 5824273 5824274 HAPS_1321 HAPS_1322 htpX ppa TRUE 0.715 67.000 0.015 1.000 N NA
 5824274 5824275 HAPS_1322 HAPS_1323 ppa   FALSE 0.151 135.000 0.000 1.000 N NA
 5824275 5824276 HAPS_1323 HAPS_1324   fic TRUE 0.796 18.000 0.000 1.000   NA
 5824276 5824277 HAPS_1324 HAPS_1325 fic   FALSE 0.089 160.000 0.000 1.000   NA
 5824277 5824278 HAPS_1325 HAPS_1326     TRUE 0.895 -3.000 0.000 NA   NA
 5824281 5824282 HAPS_1329 HAPS_1330     TRUE 0.933 6.000 0.000 NA   NA
 5824282 5824283 HAPS_1330 HAPS_1331     FALSE 0.120 153.000 0.000 NA   NA
 5824283 5824284 HAPS_1331 HAPS_1332     FALSE 0.019 449.000 0.000 NA   NA
 5824284 5824285 HAPS_1332 HAPS_1333     TRUE 0.735 28.000 0.000 NA   NA
 5824285 5824286 HAPS_1333 HAPS_1334     TRUE 0.745 27.000 0.000 NA   NA
 5824286 5824287 HAPS_1334 HAPS_1335     FALSE 0.020 402.000 0.000 NA   NA
 5824287 5824288 HAPS_1335 HAPS_1336     FALSE 0.240 89.000 0.000 NA   NA
 5824288 5824289 HAPS_1336 HAPS_1337     FALSE 0.021 390.000 0.000 NA   NA
 5824289 5824290 HAPS_1337 HAPS_1338     FALSE 0.030 295.000 0.000 NA   NA
 5824290 5824291 HAPS_1338 HAPS_1339   putP FALSE 0.017 484.000 0.000 NA   NA
 5824291 5824292 HAPS_1339 HAPS_1340 putP putA TRUE 0.567 116.000 0.040 1.000 N NA
 5824292 5824293 HAPS_1340 HAPS_1341 putA nrdB FALSE 0.029 318.000 0.000 1.000 N NA
 5824293 5824294 HAPS_1341 HAPS_1342 nrdB nrdA TRUE 0.990 -13.000 0.269 0.001 Y NA
 5824294 5824295 HAPS_1342 HAPS_1343 nrdA   TRUE 0.491 55.000 0.000 NA   NA
 5824295 5824296 HAPS_1343 HAPS_1344   potD TRUE 0.864 14.000 0.000 NA   NA
 5824296 5824297 HAPS_1344 HAPS_1345 potD yaaH TRUE 0.669 15.000 0.000 0.069   NA
 5824297 5824298 HAPS_1345 HAPS_1346 yaaH ruvA FALSE 0.026 287.000 0.000 1.000   NA
 5824299 5824300 HAPS_1347 HAPS_1348 sprT   TRUE 0.937 24.000 0.019 NA   NA
 5824303 5824304 HAPS_1351 HAPS_1352 rpsT   TRUE 0.896 11.000 0.000 NA   NA
 5824304 5824305 HAPS_1352 HAPS_1353   mutL FALSE 0.079 191.000 0.000 NA   NA
 5824305 5824306 HAPS_1353 HAPS_1354 mutL metE FALSE 0.060 214.000 0.000 1.000 N NA
 5824306 5824307 HAPS_1354 HAPS_1355 metE recN FALSE 0.046 243.000 0.000 1.000 N NA
 5824308 5824309 HAPS_1356 HAPS_1357 lppA   FALSE 0.278 81.000 0.000 NA   NA
 5824312 5824313 HAPS_1360 HAPS_1361 terC thiQ FALSE 0.024 355.000 0.000 1.000 N NA
 5824313 5824314 HAPS_1361 HAPS_1362 thiQ fstN FALSE 0.153 151.000 0.000 NA N NA
 5824314 5824315 HAPS_1362 HAPS_1363 fstN   TRUE 0.848 16.000 0.000 NA   NA
 5824316 5824317 HAPS_1364 HAPS_1365 tonB exbD TRUE 0.999 0.000 0.733 0.069 N NA
 5824317 5824318 HAPS_1365 HAPS_1366 exbD exbB TRUE 0.996 43.000 1.000 0.047 Y NA
 5824319 5824320 HAPS_1367 HAPS_1368 pspE sohB TRUE 0.446 62.000 0.000 1.000 N NA
 5824320 5824321 HAPS_1368 HAPS_1369 sohB dusB FALSE 0.058 219.000 0.000 1.000 N NA
 5824321 5824322 HAPS_1369 HAPS_1370 dusB fis TRUE 0.986 17.000 0.161 1.000 N NA
 5824322 5824323 HAPS_1370 HAPS_1371 fis ubiE FALSE 0.029 312.000 0.000 1.000 N NA
 5824323 5824324 HAPS_1371 HAPS_1372 ubiE yigP TRUE 0.994 3.000 0.145 1.000   NA
 5824324 5824325 HAPS_1372 HAPS_1373 yigP ubiB TRUE 0.958 62.000 0.432 1.000   NA
 5824326 5824327 HAPS_1374 HAPS_1375 mesJ dtd TRUE 0.857 9.000 0.000 0.052 N NA
 5824327 5824328 HAPS_1375 HAPS_1376 dtd rbn TRUE 0.983 -3.000 0.069 1.000   NA
 5824330 5824331 HAPS_1378 HAPS_1379 espP purD FALSE 0.043 221.000 0.000 1.000   NA
 5824332 5824333 HAPS_1380 HAPS_1381 proA espP FALSE 0.069 185.000 0.000 1.000   NA
 5824333 5824334 HAPS_1381 HAPS_1382 espP   FALSE 0.050 208.000 0.000 1.000   NA
 5824334 5824335 HAPS_1382 HAPS_1383   gor FALSE 0.170 97.000 0.000 1.000   NA
 5824335 5824336 HAPS_1383 HAPS_1384 gor   TRUE 0.920 23.000 0.006 NA   NA
 5824337 5824338 HAPS_1385 HAPS_1386 nrdG pts TRUE 0.987 0.000 0.037 1.000 N NA
 5824338 5824339 HAPS_1386 HAPS_1387 pts queC TRUE 0.973 -7.000 0.062 1.000   NA
 5824340 5824341 HAPS_1388 HAPS_1389 pirA pepB FALSE 0.024 351.000 0.000 NA   NA
 5824341 5824342 HAPS_1389 HAPS_1390 pepB   TRUE 0.553 55.000 0.000 NA N NA
 5824343 5824344 HAPS_1391 HAPS_1392 tatC tatB FALSE 0.289 174.000 0.000 NA Y NA
 5824344 5824345 HAPS_1392 HAPS_1393 tatB tatA TRUE 0.981 4.000 0.000 1.000 Y NA
 5824346 5824347 HAPS_1394 HAPS_1395 yidC smtA TRUE 0.910 10.000 0.000 NA   NA
 5824347 5824348 HAPS_1395 HAPS_1396 smtA omp18/16 TRUE 0.608 44.000 0.000 NA   NA
 5824348 5824349 HAPS_1396 HAPS_1397 omp18/16   FALSE 0.015 715.000 0.000 NA   NA
 5824349 5824350 HAPS_1397 HAPS_1398     TRUE 0.778 24.000 0.000 NA   NA
 5824350 5824351 HAPS_1398 HAPS_1399     TRUE 0.342 70.000 0.000 NA   NA
 5824351 5824352 HAPS_1399 HAPS_1400     FALSE 0.018 460.000 0.000 NA   NA
 5824352 5824353 HAPS_1400 HAPS_1401     FALSE 0.095 175.000 0.000 NA   NA
 5824353 5824354 HAPS_1401 HAPS_1402     TRUE 0.820 19.000 0.000 NA   NA
 5824354 5824355 HAPS_1402 HAPS_1403     TRUE 0.803 21.000 0.000 NA   NA
 5824355 5824356 HAPS_1403 HAPS_1404     TRUE 0.500 54.000 0.000 NA   NA
 5824356 5824357 HAPS_1404 HAPS_1405   xerD FALSE 0.178 113.000 0.000 NA   NA
 5824357 5824358 HAPS_1405 HAPS_1406 xerD   TRUE 0.974 2.000 0.003 NA   NA
 5824359 5824360 HAPS_1407 HAPS_1408 adpP psiE TRUE 0.969 10.000 0.011 1.000   NA
 5824360 5824361 HAPS_1408 HAPS_1409 psiE yieE TRUE 0.986 8.000 0.045 1.000   NA
 5824361 5824362 HAPS_1409 HAPS_1410 yieE rplL FALSE 0.235 92.000 0.000 1.000 N NA
 5824362 5824363 HAPS_1410 HAPS_1411 rplL rplJ TRUE 0.992 58.000 0.884 0.021 Y NA
 5824363 5824364 HAPS_1411 HAPS_1412 rplJ coaD FALSE 0.021 401.000 0.000 1.000 N NA
 5824364 5824365 HAPS_1412 HAPS_1413 coaD kdtA TRUE 0.986 2.000 0.020 1.000 N NA
 5824365 5824366 HAPS_1413 HAPS_1414 kdtA dnaE TRUE 0.914 10.000 0.000 1.000 N NA
 5824366 5824367 HAPS_1414 HAPS_1415 dnaE   TRUE 0.796 22.000 0.000 NA   NA
 5824367 5824368 HAPS_1415 HAPS_1416     TRUE 0.995 1.000 0.182 NA   NA
 5824368 5824369 HAPS_1416 HAPS_1417   yigQ FALSE 0.182 111.000 0.000 NA   NA
 5824369 5824370 HAPS_1417 HAPS_1418 yigQ yjgP TRUE 0.997 -3.000 0.631 0.052   NA
 5824371 5824372 HAPS_1419 HAPS_1420 pepA prtC FALSE 0.031 201.000 0.000 0.021 N NA
 5824372 5824373 HAPS_1420 HAPS_1421 prtC pepO FALSE 0.252 139.000 0.000 0.021 Y NA
 5824373 5824374 HAPS_1421 HAPS_1422 pepO menB FALSE 0.200 104.000 0.000 1.000 N NA
 5824374 5824375 HAPS_1422 HAPS_1423 menB   FALSE 0.226 92.000 0.000 NA   NA
 5824376 5824377 HAPS_1424 HAPS_1425   azoR FALSE 0.145 135.000 0.000 NA   NA
 5824377 5824378 HAPS_1425 HAPS_1426 azoR   FALSE 0.071 198.000 0.000 NA   NA
 5824378 5824379 HAPS_1426 HAPS_1427     TRUE 0.672 -167.000 0.000 NA   NA
 5824379 5824380 HAPS_1427 HAPS_1428   rplQ FALSE 0.054 220.000 0.000 NA   NA
 5824380 5824381 HAPS_1428 HAPS_1429 rplQ rpoA TRUE 0.995 36.000 0.873 1.000 N NA
 5824381 5824382 HAPS_1429 HAPS_1430 rpoA rpsD TRUE 0.990 32.000 0.549 1.000 N NA
 5824382 5824383 HAPS_1430 HAPS_1431 rpsD rpsK TRUE 0.994 29.000 0.509 0.029 Y NA
 5824383 5824384 HAPS_1431 HAPS_1432 rpsK rpsM TRUE 0.998 17.000 0.810 0.021 Y NA
 5824384 5824385 HAPS_1432 HAPS_1433 rpsM rpmJ TRUE 0.600 139.000 0.194 0.021   NA
 5824385 5824386 HAPS_1433 HAPS_1434 rpmJ secY TRUE 0.962 25.000 0.089 1.000   NA
 5824386 5824387 HAPS_1434 HAPS_1435 secY rplO TRUE 0.999 4.000 0.730 1.000 N NA
 5824387 5824388 HAPS_1435 HAPS_1436 rplO rpmD TRUE 0.999 5.000 0.653 0.004 Y NA
 5824388 5824389 HAPS_1436 HAPS_1437 rpmD rpsE TRUE 0.999 7.000 0.789 0.029 Y NA
 5824389 5824390 HAPS_1437 HAPS_1438 rpsE rplR TRUE 0.999 15.000 0.814 0.029 Y NA
 5824390 5824391 HAPS_1438 HAPS_1439 rplR rplF TRUE 0.999 15.000 0.815 0.021 Y NA
 5824391 5824392 HAPS_1439 HAPS_1440 rplF rpsH TRUE 0.998 17.000 0.808 0.021 Y NA
 5824392 5824393 HAPS_1440 HAPS_1441 rpsH rpsN TRUE 0.990 37.000 0.473 0.021 Y NA
 5824393 5824394 HAPS_1441 HAPS_1442 rpsN rplE TRUE 0.998 12.000 0.496 0.021 Y NA
 5824394 5824395 HAPS_1442 HAPS_1443 rplE rplX TRUE 0.998 18.000 0.758 0.021 Y NA
 5824395 5824396 HAPS_1443 HAPS_1444 rplX rplN TRUE 0.999 13.000 0.810 0.029 Y NA
 5824397 5824398 HAPS_1445 HAPS_1446 hhdB hhdA TRUE 0.367 68.000 0.000 NA   NA
 5824398 5824399 HAPS_1446 HAPS_1447 hhdA   FALSE 0.081 190.000 0.000 NA   NA
 5824400 5824401 HAPS_1448 HAPS_1449     FALSE 0.098 173.000 0.000 NA   NA
 5824403 5824404 HAPS_1451 HAPS_1452 yejF nikC TRUE 0.941 71.000 0.472 1.000   NA
 5824404 5824405 HAPS_1452 HAPS_1453 nikC nikB TRUE 0.998 -3.000 0.558 0.035 Y NA
 5824405 5824406 HAPS_1453 HAPS_1454 nikB nikA TRUE 0.654 272.000 0.431 0.035 Y NA
 5824406 5824407 HAPS_1454 HAPS_1455 nikA modE FALSE 0.135 119.000 0.000 1.000   NA
 5824410 5824411 HAPS_1458 HAPS_1459 thyA   FALSE 0.074 195.000 0.000 NA   NA
 5824411 5824412 HAPS_1459 HAPS_1460     TRUE 0.874 13.000 0.000 NA   NA
 5824412 5824413 HAPS_1460 HAPS_1461     TRUE 0.820 19.000 0.000 NA   NA
 5824415 5824416 HAPS_1463 HAPS_1464 purC   FALSE 0.051 228.000 0.000 NA   NA
 5824420 5824421 HAPS_1468 HAPS_1469   lysA TRUE 0.654 38.000 0.000 NA   NA
 5824421 5824422 HAPS_1469 HAPS_1470 lysA mtr TRUE 0.938 19.000 0.000 1.000 Y NA
 5824422 5824423 HAPS_1470 HAPS_1471 mtr mutS TRUE 0.481 82.000 0.003 1.000 N NA
 5824423 5824424 HAPS_1471 HAPS_1472 mutS   FALSE 0.034 279.000 0.000 NA   NA
 5824427 5824428 HAPS_1475 HAPS_1476 prmA   FALSE 0.078 193.000 0.000 NA   NA
 5824428 5824429 HAPS_1476 HAPS_1477   secB FALSE 0.014 746.000 0.000 NA   NA
 5824429 5824430 HAPS_1477 HAPS_1478 secB   TRUE 0.973 29.000 0.158 NA N NA
 5824430 5824431 HAPS_1478 HAPS_1479   tig TRUE 0.416 103.000 0.003 NA N NA
 5824431 5824432 HAPS_1479 HAPS_1480 tig   FALSE 0.016 614.000 0.000 NA   NA
 5824433 5824434 HAPS_1481 HAPS_1482   sseA TRUE 0.513 53.000 0.000 NA   NA
 5824434 5824435 HAPS_1482 HAPS_1483 sseA pncB FALSE 0.022 372.000 0.000 NA   NA
 5824436 5824437 HAPS_1484 HAPS_1485 map glmS FALSE 0.204 102.000 0.000 1.000 N NA
 5824437 5824438 HAPS_1485 HAPS_1486 glmS   TRUE 0.985 34.000 0.412 1.000 N NA
 5824438 5824439 HAPS_1486 HAPS_1487     FALSE 0.063 208.000 0.000 NA   NA
 5824439 5824440 HAPS_1487 HAPS_1488     TRUE 0.895 -3.000 0.000 NA   NA
 5824440 5824441 HAPS_1488 HAPS_1489     FALSE 0.060 210.000 0.000 NA   NA
 5824441 5824442 HAPS_1489 HAPS_1490     TRUE 0.654 38.000 0.000 NA   NA
 5824442 5824443 HAPS_1490 HAPS_1491   ygiW FALSE 0.254 85.000 0.000 NA   NA
 5824443 5824444 HAPS_1491 HAPS_1492 ygiW recG FALSE 0.033 284.000 0.000 NA   NA
 5824444 5824445 HAPS_1492 HAPS_1493 recG xseA FALSE 0.178 113.000 0.000 NA   NA
 5824445 5824446 HAPS_1493 HAPS_1494 xseA birA FALSE 0.296 76.000 0.000 NA   NA
 5824450 5824451 HAPS_1498 HAPS_1499 tatD vacB TRUE 0.899 13.000 0.000 NA N NA
 5824452 5824453 HAPS_1500 HAPS_1501 dcuB dnaA FALSE 0.042 222.000 0.000 1.000   NA
 5824453 5824454 HAPS_1501 HAPS_1502 dnaA dnaN TRUE 0.998 10.000 0.328 1.000 Y NA
 5824454 5824455 HAPS_1502 HAPS_1503 dnaN   TRUE 0.643 32.000 0.000 1.000   NA
 5824455 5824456 HAPS_1503 HAPS_1504     TRUE 0.996 0.000 0.220 NA   NA
 5824456 5824457 HAPS_1504 HAPS_1505     FALSE 0.209 96.000 0.000 NA   NA
 5824457 5824458 HAPS_1505 HAPS_1506   corB TRUE 0.697 182.000 0.349 1.000   NA
 5824458 5824459 HAPS_1506 HAPS_1507 corB   FALSE 0.030 297.000 0.000 NA   NA
 5824461 5824462 HAPS_1509 HAPS_1510 mioC   FALSE 0.031 291.000 0.000 NA   NA
 5824462 5824463 HAPS_1510 HAPS_1511   sclB9 FALSE 0.027 320.000 0.000 NA   NA
 5824464 5824465 HAPS_1512 HAPS_1513 cysE gpsA TRUE 0.998 3.000 0.429 1.000 N NA
 5824465 5824466 HAPS_1513 HAPS_1514 gpsA arcA FALSE 0.025 339.000 0.000 1.000 N NA
 5824466 5824467 HAPS_1514 HAPS_1515 arcA cdd FALSE 0.095 178.000 0.000 1.000 N NA
 5824467 5824468 HAPS_1515 HAPS_1516 cdd folB TRUE 0.521 99.000 0.018 1.000 N NA
 5824470 5824471 HAPS_1518 HAPS_1519 gidB ppnK TRUE 0.667 36.000 0.000 NA   NA
 5824471 5824472 HAPS_1519 HAPS_1520 ppnK gidA FALSE 0.029 301.000 0.000 NA   NA
 5824473 5824474 HAPS_1521 HAPS_1522   fucR FALSE 0.143 137.000 0.000 NA   NA
 5824475 5824476 HAPS_1523 HAPS_1524     TRUE 0.910 10.000 0.000 NA   NA
 5824476 5824477 HAPS_1524 HAPS_1525   csgG TRUE 0.890 10.000 0.000 1.000   NA
 5824478 5824479 HAPS_1526 HAPS_1527 fucI fucK TRUE 0.874 141.000 0.269 1.000 Y NA
 5824479 5824480 HAPS_1527 HAPS_1528 fucK fucU TRUE 0.710 220.000 0.263 1.000 Y NA
 5824480 5824481 HAPS_1528 HAPS_1529 fucU fucA TRUE 0.999 10.000 0.417 1.000 Y NA
 5824482 5824483 HAPS_1530 HAPS_1531 rpiR iolC TRUE 0.526 122.000 0.036 1.000 N NA
 5824484 5824485 HAPS_1532 HAPS_1533 iolD iolE TRUE 0.753 84.000 0.081 1.000 N NA
 5824485 5824486 HAPS_1533 HAPS_1534 iolE iolG TRUE 0.993 2.000 0.104 1.000   NA
 5824487 5824488 HAPS_1535 HAPS_1536 celB alfA TRUE 0.981 2.000 0.000 1.000 Y NA
 5824488 5824489 HAPS_1536 HAPS_1537 alfA   FALSE 0.244 77.000 0.000 1.000   NA
 5824489 5824490 HAPS_1537 HAPS_1538   rbsC FALSE 0.177 95.000 0.000 1.000   NA
 5824490 5824491 HAPS_1538 HAPS_1539 rbsC rbsA TRUE 0.299 336.000 0.061 1.000 Y NA
 5824491 5824492 HAPS_1539 HAPS_1540 rbsA rbsD TRUE 0.454 112.000 0.000 NA Y NA
 5824492 5824493 HAPS_1540 HAPS_1541 rbsD   FALSE 0.035 317.000 0.000 NA N NA
 5824494 5824495 HAPS_1542 HAPS_1543 iolB   FALSE 0.047 237.000 0.000 NA   NA
 5824495 5824496 HAPS_1543 HAPS_1544   fucA FALSE 0.190 106.000 0.000 NA   NA
 5824497 5824498 HAPS_1545 HAPS_1546   dsrF TRUE 0.999 10.000 0.804 NA Y NA
 5824498 5824499 HAPS_1546 HAPS_1547 dsrF tusD TRUE 1.000 2.000 0.790 NA Y NA
 5824499 5824500 HAPS_1547 HAPS_1548 tusD yheO TRUE 0.996 0.000 0.220 NA   NA
 5824500 5824501 HAPS_1548 HAPS_1549 yheO fkpA TRUE 0.932 68.000 0.310 NA   NA
 5824502 5824503 HAPS_1550 HAPS_1551 slyX   TRUE 0.862 37.000 0.008 NA   NA
 5824503 5824504 HAPS_1551 HAPS_1552   mtn TRUE 0.976 -3.000 0.025 NA   NA
 5824504 5824505 HAPS_1552 HAPS_1553 mtn yliG FALSE 0.240 165.000 0.004 1.000 N NA
 5824505 5824506 HAPS_1553 HAPS_1554 yliG glyQ FALSE 0.061 423.000 0.000 1.000 Y NA
 5824506 5824507 HAPS_1554 HAPS_1555 glyQ   TRUE 0.749 54.000 0.003 NA N NA
 5824507 5824508 HAPS_1555 HAPS_1556     TRUE 0.545 82.000 0.008 NA   NA
 5824508 5824509 HAPS_1556 HAPS_1557     FALSE 0.110 160.000 0.000 NA   NA
 5824509 5824510 HAPS_1557 HAPS_1558     FALSE 0.044 245.000 0.000 NA   NA
 5824510 5824511 HAPS_1558 HAPS_1559   glyS TRUE 0.694 32.000 0.000 NA   NA
 5824511 5824512 HAPS_1559 HAPS_1560 glyS bioA TRUE 0.525 53.000 0.000 1.000 N NA
 5824512 5824513 HAPS_1560 HAPS_1561 bioA bioF TRUE 0.982 -7.000 0.056 0.003 Y NA
 5824513 5824514 HAPS_1561 HAPS_1562 bioF bioD TRUE 0.978 13.000 0.049 NA   NA
 5824514 5824515 HAPS_1562 HAPS_1563 bioD bioC TRUE 0.983 -9.000 0.163 NA   NA
 5824515 5824516 HAPS_1563 HAPS_1564 bioC bioD TRUE 0.981 -10.000 0.081 0.003 Y NA
 5824516 5824517 HAPS_1564 HAPS_1565 bioD   TRUE 0.789 23.000 0.000 NA   NA
 5824517 5824518 HAPS_1565 HAPS_1566   xerC TRUE 0.418 124.000 0.014 NA   NA
 5824518 5824519 HAPS_1566 HAPS_1567 xerC rpoH TRUE 0.476 58.000 0.000 1.000 N NA
 5824520 5824521 HAPS_1568 HAPS_1569 cjrC cjrA TRUE 0.848 16.000 0.000 NA   NA
 5824521 5824522 HAPS_1569 HAPS_1570 cjrA hmuV TRUE 0.444 108.000 0.011 NA   NA
 5824522 5824523 HAPS_1570 HAPS_1571 hmuV hmuU TRUE 0.998 0.000 0.220 1.000 Y NA
 5824523 5824524 HAPS_1571 HAPS_1572 hmuU hmuT TRUE 1.000 0.000 0.852 1.000 Y NA
 5824524 5824525 HAPS_1572 HAPS_1573 hmuT smf TRUE 0.525 53.000 0.000 1.000 N NA
 5824526 5824527 HAPS_1574 HAPS_1575 def rfaD TRUE 0.967 12.000 0.012 1.000 N NA
 5824527 5824528 HAPS_1575 HAPS_1576 rfaD   FALSE 0.226 92.000 0.000 NA   NA
 5824528 5824529 HAPS_1576 HAPS_1577     TRUE 0.740 -19.000 0.000 NA   NA
 5824530 5824531 HAPS_1578 HAPS_1579     FALSE 0.053 221.000 0.000 NA   NA
 5824531 5824532 HAPS_1579 HAPS_1580     TRUE 0.976 28.000 0.189 NA   NA
 5824532 5824533 HAPS_1580 HAPS_1581     FALSE 0.015 664.000 0.000 NA   NA
 5824533 5824534 HAPS_1581 HAPS_1582     TRUE 0.740 -19.000 0.000 NA   NA
 5824534 5824535 HAPS_1582 HAPS_1583     FALSE 0.196 102.000 0.000 NA   NA
 5824535 5824536 HAPS_1583 HAPS_1584     TRUE 0.790 -12.000 0.000 NA   NA
 5824536 5824537 HAPS_1584 HAPS_1585     FALSE 0.182 111.000 0.000 NA   NA
 5824537 5824538 HAPS_1585 HAPS_1586     FALSE 0.118 155.000 0.000 NA   NA
 5824538 5824539 HAPS_1586 HAPS_1587     FALSE 0.016 584.000 0.000 NA   NA
 5824539 5824540 HAPS_1587 HAPS_1588     FALSE 0.029 305.000 0.000 NA   NA
 5824541 5824542 HAPS_1589 HAPS_1590 selA selB TRUE 0.996 -3.000 0.569 0.001 N NA
 5824544 5824545 HAPS_1592 HAPS_1593 rpoB   FALSE 0.248 86.000 0.000 NA   NA
 5824545 5824546 HAPS_1593 HAPS_1594   rpoC TRUE 0.752 -16.000 0.000 NA   NA
 5824547 5824548 HAPS_1595 HAPS_1596 recF   TRUE 0.618 43.000 0.000 NA   NA
 5824548 5824549 HAPS_1596 HAPS_1597   trmB TRUE 0.967 25.000 0.092 NA   NA
 5824549 5824550 HAPS_1597 HAPS_1598 trmB fabH TRUE 0.936 16.000 0.006 1.000   NA
 5824550 5824551 HAPS_1598 HAPS_1599 fabH   FALSE 0.164 124.000 0.000 1.000 N NA
 5824553 5824554 HAPS_1601 HAPS_1602 pyrAB fumC FALSE 0.071 182.000 0.000 1.000   NA
 5824554 5824555 HAPS_1602 HAPS_1603 fumC tfoX TRUE 0.304 147.000 0.005 NA   NA
 5824555 5824556 HAPS_1603 HAPS_1604 tfoX   FALSE 0.128 148.000 0.000 NA   NA
 5824557 5824558 HAPS_1605 HAPS_1606 rpsJ rplC TRUE 0.995 17.000 0.307 0.028 Y NA
 5824558 5824559 HAPS_1606 HAPS_1607 rplC rplD TRUE 0.997 16.000 0.486 0.020 Y NA
 5824559 5824560 HAPS_1607 HAPS_1608 rplD rplW TRUE 0.998 -3.000 0.513 0.020 Y NA
 5824560 5824561 HAPS_1608 HAPS_1609 rplW rplB TRUE 0.998 21.000 0.849 0.024 Y NA
 5824561 5824562 HAPS_1609 HAPS_1610 rplB rpsS TRUE 0.997 29.000 0.820 0.028 Y NA
 5824562 5824563 HAPS_1610 HAPS_1611 rpsS rplV TRUE 0.999 11.000 0.769 0.028 Y NA
 5824563 5824564 HAPS_1611 HAPS_1612 rplV rpsC TRUE 0.998 18.000 0.719 0.028 Y NA
 5824564 5824565 HAPS_1612 HAPS_1613 rpsC rplP TRUE 0.999 13.000 0.828 0.028 Y NA
 5824565 5824566 HAPS_1613 HAPS_1614 rplP rpmC TRUE 0.991 0.000 0.029 0.028 Y NA
 5824566 5824567 HAPS_1614 HAPS_1615 rpmC rpsQ TRUE 0.991 0.000 0.029 0.028 Y NA
 5824567 5824568 HAPS_1615 HAPS_1616 rpsQ nanH FALSE 0.016 716.000 0.000 1.000 N NA
 5824569 5824570 HAPS_1617 HAPS_1618     FALSE 0.171 117.000 0.000 NA   NA
 5824571 5824572 HAPS_1619 HAPS_1620 atpI atpB TRUE 0.992 29.000 0.291 1.000 Y NA
 5824572 5824573 HAPS_1620 HAPS_1621 atpB atpE TRUE 0.911 141.000 0.557 0.004 Y NA
 5824573 5824574 HAPS_1621 HAPS_1622 atpE atpF TRUE 0.984 62.000 0.666 0.004 Y NA
 5824574 5824575 HAPS_1622 HAPS_1623 atpF atpH TRUE 0.994 14.000 0.242 0.004 Y NA
 5824575 5824576 HAPS_1623 HAPS_1624 atpH atpA TRUE 0.999 13.000 0.864 0.004 Y NA
 5824576 5824577 HAPS_1624 HAPS_1625 atpA atpG TRUE 0.998 23.000 0.846 0.004 Y NA
 5824577 5824578 HAPS_1625 HAPS_1626 atpG atpD TRUE 0.997 21.000 0.724 0.004 Y NA
 5824578 5824579 HAPS_1626 HAPS_1627 atpD atpC TRUE 0.997 27.000 0.837 0.004 Y NA
 5824579 5824580 HAPS_1627 HAPS_1628 atpC rbsR TRUE 0.509 75.000 0.002 1.000 N NA
 5824580 5824581 HAPS_1628 HAPS_1629 rbsR rbsD TRUE 0.463 115.000 0.015 1.000 N NA
 5824581 5824582 HAPS_1629 HAPS_1630 rbsD rbsA TRUE 0.998 10.000 0.337 1.000 Y NA
 5824582 5824583 HAPS_1630 HAPS_1631 rbsA rbsC TRUE 0.998 12.000 0.504 1.000 Y NA
 5824583 5824584 HAPS_1631 HAPS_1632 rbsC rbsB TRUE 0.997 41.000 0.847 NA Y NA
 5824584 5824585 HAPS_1632 HAPS_1633 rbsB rbsK TRUE 0.967 73.000 0.347 NA Y NA
 5824585 5824586 HAPS_1633 HAPS_1634 rbsK glnA FALSE 0.018 485.000 0.000 1.000 N NA
 5824591 5824592 HAPS_1639 HAPS_1640 dsbA pykF TRUE 0.929 0.000 0.000 NA   NA
 5824594 5824595 HAPS_1642 HAPS_1643     TRUE 0.866 -6.000 0.000 NA   NA
 5824596 5824597 HAPS_1644 HAPS_1645 recB   FALSE 0.025 338.000 0.000 NA   NA
 5824599 5824600 HAPS_1647 HAPS_1648 grpE   FALSE 0.205 97.000 0.000 NA   NA
 5824600 5824601 HAPS_1648 HAPS_1649     TRUE 0.408 64.000 0.000 NA   NA
 5824601 5824602 HAPS_1649 HAPS_1650   hrpA TRUE 0.956 15.000 0.012 NA   NA
 5824602 5824603 HAPS_1650 HAPS_1651 hrpA tyrS FALSE 0.036 208.000 0.000 0.093 N NA
 5824605 5824606 HAPS_1653 HAPS_1654 hflC   TRUE 0.998 10.000 0.313 NA Y NA
 5824607 5824608 HAPS_1655 HAPS_1656 uraA   FALSE 0.022 195.000 0.000 0.033   NA
 5824608 5824609 HAPS_1656 HAPS_1657   gsp FALSE 0.086 183.000 0.000 NA   NA
 5824611 5824612 HAPS_1659 HAPS_1660     TRUE 0.424 56.000 0.000 1.000   NA
 5824613 5824614 HAPS_1661 HAPS_1662   lolD FALSE 0.085 190.000 0.000 1.000 N NA
 5824614 5824615 HAPS_1662 HAPS_1663 lolD lolE TRUE 0.991 0.000 0.125 0.045 N NA
 5824616 5824617 HAPS_1664 HAPS_1665 codA   FALSE 0.057 242.000 0.000 NA N NA
 5824617 5824618 HAPS_1665 HAPS_1666   ndh TRUE 0.609 46.000 0.000 1.000 N NA
 5824618 5824619 HAPS_1666 HAPS_1667 ndh ubiE FALSE 0.025 339.000 0.000 1.000 N NA
 5824619 5824620 HAPS_1667 HAPS_1668 ubiE lpxM FALSE 0.170 120.000 0.000 1.000 N NA
 5824620 5824621 HAPS_1668 HAPS_1669 lpxM rnfE TRUE 0.980 10.000 0.023 1.000 N NA
 5824621 5824622 HAPS_1669 HAPS_1670 rnfE   FALSE 0.085 190.000 0.000 1.000 N NA
 5824622 5824623 HAPS_1670 HAPS_1671   rnfG TRUE 0.688 34.000 0.000 1.000 N NA
 5824623 5824624 HAPS_1671 HAPS_1672 rnfG rnfD TRUE 0.999 -3.000 0.924 0.029 Y NA
 5824624 5824625 HAPS_1672 HAPS_1673 rnfD yadS TRUE 0.905 31.000 0.015 NA   NA
 5824625 5824626 HAPS_1673 HAPS_1674 yadS rnfC TRUE 0.618 79.000 0.016 NA   NA
 5824626 5824627 HAPS_1674 HAPS_1675 rnfC rnfB TRUE 0.996 -10.000 0.537 0.029 Y NA
 5824627 5824628 HAPS_1675 HAPS_1676 rnfB rnfA TRUE 0.999 0.000 0.564 0.029 Y NA
 5824629 5824630 HAPS_1677 HAPS_1678   accA TRUE 0.848 16.000 0.000 NA   NA
 5824630 5824631 HAPS_1678 HAPS_1679 accA pdxY FALSE 0.187 108.000 0.000 NA   NA
 5824631 5824632 HAPS_1679 HAPS_1680 pdxY mesJ TRUE 0.930 7.000 0.000 NA   NA
 5824634 5824635 HAPS_1682 HAPS_1683   tra5 TRUE 0.647 39.000 0.000 NA   NA
 5824635 5824636 HAPS_1683 HAPS_1684 tra5   TRUE 0.632 41.000 0.000 NA   NA
 5824637 5824638 HAPS_1685 HAPS_1686   proS FALSE 0.020 408.000 0.000 NA   NA
 5824639 5824640 HAPS_1687 HAPS_1688 acpP rbsK FALSE 0.136 147.000 0.000 1.000 N NA
 5824641 5824642 HAPS_1689 HAPS_1690 cutC galM TRUE 0.941 1.000 0.000 1.000 N NA
 5824642 5824643 HAPS_1690 HAPS_1691 galM galK TRUE 0.803 71.000 0.009 1.000 Y NA
 5824643 5824644 HAPS_1691 HAPS_1692 galK   TRUE 0.352 69.000 0.000 NA   NA
 5824644 5824645 HAPS_1692 HAPS_1693     FALSE 0.190 106.000 0.000 NA   NA
 5824645 5824646 HAPS_1693 HAPS_1694   holC TRUE 0.921 9.000 0.000 NA   NA
 5824646 5824647 HAPS_1694 HAPS_1695 holC   FALSE 0.198 106.000 0.000 1.000 N NA
 5824650 5824651 HAPS_1698 HAPS_1699 malF malG FALSE 0.036 272.000 0.000 NA   NA
 5824651 5824652 HAPS_1699 HAPS_1700 malG   TRUE 0.472 57.000 0.000 NA   NA
 5824653 5824654 HAPS_1701 HAPS_1702 ponB torD FALSE 0.218 94.000 0.000 NA   NA
 5824655 5824656 HAPS_1703 HAPS_1704 nfo nlpC FALSE 0.168 118.000 0.000 NA   NA
 5824656 5824657 HAPS_1704 HAPS_1705 nlpC rplK FALSE 0.031 293.000 0.000 NA   NA
 5824657 5824658 HAPS_1705 HAPS_1706 rplK rplA TRUE 0.999 5.000 0.838 0.027 Y NA
 5824660 5824661 HAPS_1708 HAPS_1709     FALSE 0.201 99.000 0.000 NA   NA
 5824663 5824664 HAPS_1711 HAPS_1712 potD   FALSE 0.132 146.000 0.000 NA   NA
 5824665 5824666 HAPS_1713 HAPS_1714 hsdM prrC TRUE 0.866 -6.000 0.000 NA   NA
 5824666 5824667 HAPS_1714 HAPS_1715 prrC hsdS TRUE 0.321 73.000 0.000 NA   NA
 5824667 5824668 HAPS_1715 HAPS_1716 hsdS hsdS TRUE 0.583 47.000 0.000 NA   NA
 5824668 5824669 HAPS_1716 HAPS_1717 hsdS   TRUE 0.720 29.000 0.000 NA   NA
 5824669 5824670 HAPS_1717 HAPS_1718     TRUE 0.990 -3.000 0.138 NA   NA
 5824670 5824671 HAPS_1718 HAPS_1719   hsdR TRUE 0.803 21.000 0.000 NA   NA
 5824674 5824675 HAPS_1722 HAPS_1723     TRUE 0.647 39.000 0.000 NA   NA
 5824676 5824677 HAPS_1724 HAPS_1725 fucO rbsB FALSE 0.088 182.000 0.000 NA   NA
 5824677 5824678 HAPS_1725 HAPS_1726 rbsB rbsC TRUE 0.998 21.000 0.550 NA Y NA
 5824678 5824679 HAPS_1726 HAPS_1727 rbsC rbsA TRUE 0.999 12.000 0.600 1.000 Y NA
 5824679 5824680 HAPS_1727 HAPS_1728 rbsA manA FALSE 0.040 231.000 0.000 1.000   NA
 5824680 5824681 HAPS_1728 HAPS_1729 manA   TRUE 0.990 -3.000 0.150 NA   NA
 5824681 5824682 HAPS_1729 HAPS_1730   manZ TRUE 0.970 74.000 0.755 NA   NA
 5824682 5824683 HAPS_1730 HAPS_1731 manZ manY TRUE 0.999 13.000 0.939 0.008 Y NA
 5824683 5824684 HAPS_1731 HAPS_1732 manY manX TRUE 0.996 11.000 0.255 0.008 Y NA
 5824684 5824685 HAPS_1732 HAPS_1733 manX hemH FALSE 0.028 324.000 0.000 1.000 N NA
 5824685 5824686 HAPS_1733 HAPS_1734 hemH recC FALSE 0.059 217.000 0.000 1.000 N NA
 5824686 5824687 HAPS_1734 HAPS_1735 recC ubiF FALSE 0.204 102.000 0.000 1.000 N NA
 5824687 5824688 HAPS_1735 HAPS_1736 ubiF   TRUE 0.941 3.000 0.000 NA   NA
 5824689 5824690 HAPS_1737 HAPS_1738 hicA   TRUE 0.994 7.000 0.172 NA   NA
 5824690 5824691 HAPS_1738 HAPS_1739   hicB FALSE 0.052 207.000 0.000 1.000   NA
 5824691 5824692 HAPS_1739 HAPS_1740 hicB comM FALSE 0.189 92.000 0.000 1.000   NA
 5824693 5824694 HAPS_1741 HAPS_1742 holB tdk FALSE 0.275 371.000 0.211 1.000 N NA
 5824694 5824695 HAPS_1742 HAPS_1743 tdk fbp TRUE 0.995 0.000 0.209 NA   NA
 5824695 5824696 HAPS_1743 HAPS_1744 fbp   FALSE 0.187 108.000 0.000 NA   NA
 5824696 5824697 HAPS_1744 HAPS_1745     TRUE 0.789 23.000 0.000 NA   NA
 5824697 5824698 HAPS_1745 HAPS_1746     TRUE 0.778 24.000 0.000 NA   NA
 5824698 5824699 HAPS_1746 HAPS_1747   tpiA FALSE 0.102 167.000 0.000 NA   NA
 5824700 5824701 HAPS_1748 HAPS_1749 truD surE TRUE 0.491 55.000 0.000 NA   NA
 5824701 5824702 HAPS_1749 HAPS_1750 surE apoB TRUE 0.989 1.000 0.038 NA   NA
 5824702 5824703 HAPS_1750 HAPS_1751 apoB   TRUE 0.981 10.000 0.030 NA   NA
 5824703 5824704 HAPS_1751 HAPS_1752   lppB TRUE 0.396 128.000 0.054 0.002   NA
 5824704 5824705 HAPS_1752 HAPS_1753 lppB sclB10 FALSE 0.017 530.000 0.000 NA   NA
 5824706 5824707 HAPS_1754 HAPS_1755 rraA pqiA TRUE 0.408 64.000 0.000 NA   NA
 5824707 5824708 HAPS_1755 HAPS_1756 pqiA rnhB TRUE 0.895 -3.000 0.000 NA   NA
 5824708 5824709 HAPS_1756 HAPS_1757 rnhB   TRUE 0.925 4.000 0.000 1.000   NA
 5824709 5824710 HAPS_1757 HAPS_1758     TRUE 0.930 7.000 0.000 NA   NA
 5824710 5824711 HAPS_1758 HAPS_1759     TRUE 0.929 0.000 0.000 NA   NA
 5824712 5824713 HAPS_1760 HAPS_1761   bcgIA TRUE 0.327 72.000 0.000 NA   NA
 5824713 5824714 HAPS_1761 HAPS_1762 bcgIA bcgIB TRUE 0.964 -7.000 0.065 0.063   NA
 5824714 5824715 HAPS_1762 HAPS_1763 bcgIB bcgIB TRUE 0.311 74.000 0.000 NA   NA
 5824715 5824716 HAPS_1763 HAPS_1764 bcgIB hemL FALSE 0.218 94.000 0.000 NA   NA
 5824718 5824719 HAPS_1766 HAPS_1767 wecA   TRUE 0.874 13.000 0.000 NA   NA
 5824719 5824720 HAPS_1767 HAPS_1768   wecB TRUE 0.491 55.000 0.000 NA   NA
 5824720 5824721 HAPS_1768 HAPS_1769 wecB wecC TRUE 0.980 -13.000 0.045 1.000 Y NA
 5824721 5824722 HAPS_1769 HAPS_1770 wecC dsbD FALSE 0.238 91.000 0.000 1.000 N NA
 5824722 5824723 HAPS_1770 HAPS_1771 dsbD   TRUE 0.671 -24.000 0.000 1.000   NA
 5824723 5824724 HAPS_1771 HAPS_1772     FALSE 0.019 339.000 0.000 1.000   NA
 5824726 5824727 HAPS_1774 HAPS_1775     TRUE 0.896 11.000 0.000 NA   NA
 5824728 5824729 HAPS_1776 HAPS_1777   aroQ FALSE 0.173 96.000 0.000 1.000   NA
 5824729 5824730 HAPS_1777 HAPS_1778 aroQ ulaD FALSE 0.027 334.000 0.000 1.000 N NA
 5824730 5824731 HAPS_1778 HAPS_1779 ulaD ulaC TRUE 0.538 232.000 0.115 1.000 Y NA
 5824731 5824732 HAPS_1779 HAPS_1780 ulaC ulaA TRUE 0.798 52.000 0.049 0.004   NA
 5824733 5824734 HAPS_1781 HAPS_1782 sgbU sgbE TRUE 0.998 -6.000 0.400 1.000 Y NA
 5824734 5824735 HAPS_1782 HAPS_1783 sgbE   FALSE 0.023 362.000 0.000 NA   NA
 5824736 5824737 HAPS_1784 HAPS_1785     TRUE 0.618 43.000 0.000 NA   NA
 5824741 5824742 HAPS_1789 HAPS_1790 gntR napC FALSE 0.074 198.000 0.000 1.000 N NA
 5824742 5824743 HAPS_1790 HAPS_1791 napC napB TRUE 0.998 0.000 0.490 0.002 Y NA
 5824743 5824744 HAPS_1791 HAPS_1792 napB napH TRUE 0.997 -3.000 0.316 0.006 Y NA
 5824744 5824745 HAPS_1792 HAPS_1793 napH napG TRUE 0.999 0.000 0.795 0.029   NA
 5824745 5824746 HAPS_1793 HAPS_1794 napG napA TRUE 0.591 162.000 0.243 0.029   NA
 5824746 5824747 HAPS_1794 HAPS_1795 napA napD TRUE 0.996 33.000 0.875 NA N NA
 5824747 5824748 HAPS_1795 HAPS_1796 napD napF TRUE 0.996 2.000 0.209 NA   NA
 5824750 5824751 HAPS_1798 HAPS_1799 rpmJ1 rpmE2 TRUE 0.959 19.000 0.083 0.020   NA
 5824753 5824754 HAPS_1801 HAPS_1802   yidK TRUE 0.823 94.000 0.235 1.000   NA
 5824755 5824756 HAPS_1803 HAPS_1804   oxyR FALSE 0.129 124.000 0.000 1.000   NA
 5824756 5824757 HAPS_1804 HAPS_1805 oxyR fabR TRUE 0.991 0.000 0.034 0.025 Y NA
 5824757 5824758 HAPS_1805 HAPS_1806 fabR   TRUE 0.988 2.000 0.036 1.000   NA
 5824759 5824760 HAPS_1807 HAPS_1808 dsbA   TRUE 0.774 108.000 0.196 NA   NA
 5824763 5824764 HAPS_1811 HAPS_1812   dctP TRUE 0.367 68.000 0.000 NA   NA
 5824764 5824765 HAPS_1812 HAPS_1813 dctP sgbK TRUE 0.380 67.000 0.000 NA   NA
 5824768 5824769 HAPS_1816 HAPS_1817 nusG secE TRUE 0.992 47.000 0.843 1.000 N NA
 5824769 5824770 HAPS_1817 HAPS_1818 secE tldD FALSE 0.041 255.000 0.000 NA   NA
 5824770 5824771 HAPS_1818 HAPS_1819 tldD   TRUE 0.866 -6.000 0.000 NA   NA
 5824772 5824773 HAPS_1820 HAPS_1821     FALSE 0.130 147.000 0.000 NA   NA
 5824773 5824774 HAPS_1821 HAPS_1822   hipA TRUE 0.977 -6.000 0.050 NA   NA
 5824777 5824778 HAPS_1825 HAPS_1826     TRUE 0.944 3.000 0.000 1.000 N NA
 5824778 5824779 HAPS_1826 HAPS_1827     TRUE 0.987 4.000 0.051 0.062 N NA
 5824779 5824780 HAPS_1827 HAPS_1828     FALSE 0.083 188.000 0.000 NA   NA
 5824784 5824785 HAPS_1832 HAPS_1833     FALSE 0.128 148.000 0.000 NA   NA
 5824786 5824787 HAPS_1834 HAPS_1835     FALSE 0.088 182.000 0.000 NA   NA
 5824787 5824788 HAPS_1835 HAPS_1836   msrA FALSE 0.014 472.000 0.000 1.000   NA
 5824788 5824789 HAPS_1836 HAPS_1837 msrA   FALSE 0.128 148.000 0.000 NA   NA
 5824790 5824791 HAPS_1838 HAPS_1839 ykgA thiE TRUE 0.848 16.000 0.000 NA   NA
 5824791 5824792 HAPS_1839 HAPS_1840 thiE thiD TRUE 0.908 17.000 0.000 0.004 Y NA
 5824792 5824793 HAPS_1840 HAPS_1841 thiD thiM TRUE 0.942 11.000 0.000 0.004 Y NA
 5824795 5824796 HAPS_1843 HAPS_1844 tldD   TRUE 0.866 -6.000 0.000 NA   NA
 5824797 5824798 HAPS_1845 HAPS_1846   hipB FALSE 0.130 147.000 0.000 NA   NA
 5824798 5824799 HAPS_1846 HAPS_1847 hipB hipA TRUE 0.977 -6.000 0.050 NA   NA
 5824800 5824801 HAPS_1848 HAPS_1849   lysR TRUE 0.803 21.000 0.000 NA   NA
 5824802 5824803 HAPS_1850 HAPS_1851   doc TRUE 0.796 22.000 0.000 NA   NA
 5824805 5824806 HAPS_1853 HAPS_1854 pykF dsbA TRUE 0.929 0.000 0.000 NA   NA
 5824808 5824809 HAPS_1856 HAPS_1857 ftsY fstE TRUE 0.708 90.000 0.117 0.089 N NA
 5824809 5824810 HAPS_1857 HAPS_1858 fstE fstX TRUE 0.910 10.000 0.000 NA   NA
 5824811 5824812 HAPS_1859 HAPS_1860   ggt FALSE 0.022 377.000 0.000 NA   NA
 5824812 5824813 HAPS_1860 HAPS_1861 ggt   TRUE 0.529 52.000 0.000 NA   NA
 5824815 5824816 HAPS_1863 HAPS_1864   glpR FALSE 0.254 85.000 0.000 NA   NA
 5824817 5824818 HAPS_1865 HAPS_1866     TRUE 0.998 2.000 0.419 NA   NA
 5824818 5824819 HAPS_1866 HAPS_1867   fucA TRUE 0.988 -3.000 0.096 NA   NA
 5824819 5824820 HAPS_1867 HAPS_1868 fucA tsa TRUE 0.999 3.000 0.265 1.000 Y NA
 5824820 5824821 HAPS_1868 HAPS_1869 tsa wbpK TRUE 0.983 25.000 0.071 1.000 Y NA
 5824821 5824822 HAPS_1869 HAPS_1870 wbpK gntP TRUE 0.996 12.000 0.186 1.000 Y NA
 5824822 5824823 HAPS_1870 HAPS_1871 gntP   TRUE 0.820 60.000 0.034 NA   NA
 5824823 5824824 HAPS_1871 HAPS_1872     FALSE 0.027 326.000 0.000 NA   NA
 5824825 5824826 HAPS_1873 HAPS_1874     FALSE 0.145 135.000 0.000 NA   NA
 5824826 5824827 HAPS_1874 HAPS_1875   dld FALSE 0.014 763.000 0.000 NA   NA
 5824827 5824828 HAPS_1875 HAPS_1876 dld   FALSE 0.053 221.000 0.000 NA   NA
 5824828 5824829 HAPS_1876 HAPS_1877     TRUE 0.820 19.000 0.000 NA   NA
 5824829 5824830 HAPS_1877 HAPS_1878     FALSE 0.145 135.000 0.000 NA   NA
 5824830 5824831 HAPS_1878 HAPS_1879     FALSE 0.021 390.000 0.000 NA   NA
 5824831 5824832 HAPS_1879 HAPS_1880     FALSE 0.240 89.000 0.000 NA   NA
 5824832 5824833 HAPS_1880 HAPS_1881   murI FALSE 0.016 558.000 0.000 NA   NA
 5824833 5824834 HAPS_1881 HAPS_1882 murI ubiC TRUE 0.876 34.000 0.005 NA N NA
 5824834 5824835 HAPS_1882 HAPS_1883 ubiC neuA TRUE 0.951 1.000 0.000 NA N NA
 5824835 5824836 HAPS_1883 HAPS_1884 neuA trpS TRUE 0.658 39.000 0.000 1.000 N NA
 5824836 5824837 HAPS_1884 HAPS_1885 trpS ubiD TRUE 0.464 94.000 0.004 NA N NA
 5824837 5824838 HAPS_1885 HAPS_1886 ubiD dnaJ FALSE 0.137 160.000 0.000 NA N NA
 5824838 5824839 HAPS_1886 HAPS_1887 dnaJ vapD TRUE 0.513 53.000 0.000 NA   NA
 5824839 5824840 HAPS_1887 HAPS_1888 vapD   TRUE 0.778 24.000 0.000 NA   NA
 5824840 5824841 HAPS_1888 HAPS_1889   dnaK TRUE 0.762 25.000 0.000 NA   NA
 5824841 5824842 HAPS_1889 HAPS_1890 dnaK chaA FALSE 0.052 230.000 0.000 1.000 N NA
 5824842 5824843 HAPS_1890 HAPS_1891 chaA   TRUE 0.778 24.000 0.000 NA   NA
 5824844 5824845 HAPS_1892 HAPS_1893 carA carB TRUE 0.841 147.000 0.345 0.001 Y NA
 5824847 5824848 HAPS_1895 HAPS_1896 rpmH rnpA TRUE 0.999 0.000 0.787 1.000   NA
 5824848 5824849 HAPS_1896 HAPS_1897 rnpA   TRUE 0.995 18.000 0.540 NA   NA
 5824851 5824852 HAPS_1899 HAPS_1900   dctM TRUE 0.458 142.000 0.033 NA   NA
 5824852 5824853 HAPS_1900 HAPS_1901 dctM uspA TRUE 0.971 -33.000 0.195 NA   NA
 5824853 5824854 HAPS_1901 HAPS_1902 uspA   FALSE 0.046 213.000 0.000 1.000   NA
 5824854 5824855 HAPS_1902 HAPS_1903     FALSE 0.043 247.000 0.000 NA   NA
 5824857 5824858 HAPS_1905 HAPS_1906 gph comFC TRUE 0.710 -25.000 0.000 NA   NA
 5824858 5824859 HAPS_1906 HAPS_1907 comFC smf TRUE 0.954 11.000 0.003 NA   NA
 5824860 5824861 HAPS_1908 HAPS_1909 pilT   TRUE 0.991 9.000 0.100 NA   NA
 5824862 5824863 HAPS_1910 HAPS_1911 fmt rsmB TRUE 0.998 0.000 0.305 1.000 Y NA
 5824863 5824864 HAPS_1911 HAPS_1912 rsmB trkA TRUE 0.855 16.000 0.000 1.000 N NA
 5824864 5824865 HAPS_1912 HAPS_1913 trkA ald FALSE 0.006 899.000 0.000 0.028 N NA
 5824865 5824866 HAPS_1913 HAPS_1914 ald   FALSE 0.253 158.000 0.006 1.000   NA
 5824866 5824867 HAPS_1914 HAPS_1915     TRUE 0.482 56.000 0.000 NA   NA
 5824868 5824869 HAPS_1916 HAPS_1917   hgaI FALSE 0.078 193.000 0.000 NA   NA
 5824869 5824870 HAPS_1917 HAPS_1918 hgaI   TRUE 0.807 -10.000 0.000 NA   NA
 5824870 5824871 HAPS_1918 HAPS_1919     TRUE 0.882 -10.000 0.000 0.002 Y NA
 5824871 5824872 HAPS_1919 HAPS_1920     FALSE 0.034 247.000 0.000 1.000   NA
 5824873 5824874 HAPS_1921 HAPS_1922     TRUE 0.999 0.000 0.667 NA   NA
 5824875 5824876 HAPS_1923 HAPS_1924   trkG FALSE 0.100 170.000 0.000 NA   NA
 5824876 5824877 HAPS_1924 HAPS_1925 trkG   FALSE 0.056 218.000 0.000 NA   NA
 5824877 5824878 HAPS_1925 HAPS_1926   cof FALSE 0.268 83.000 0.000 NA   NA
 5824879 5824880 HAPS_1927 HAPS_1928 leuA pepT TRUE 0.541 84.000 0.000 1.000 Y NA
 5824880 5824881 HAPS_1928 HAPS_1929 pepT   FALSE 0.016 557.000 0.000 NA   NA
 5824882 5824883 HAPS_1931 HAPS_1930 potD   TRUE 0.675 -128.000 0.000 NA   NA
 5824883 5824884 HAPS_1930 HAPS_1932   rplT FALSE 0.025 336.000 0.000 NA   NA
 5824884 5824885 HAPS_1932 HAPS_1933 rplT rpmI TRUE 0.977 91.000 0.928 0.019 Y NA
 5824885 5824886 HAPS_1933 HAPS_1934 rpmI infC TRUE 0.968 100.000 0.652 1.000 Y NA
 5824888 5824889 HAPS_1936 HAPS_1937 aroE rplS FALSE 0.153 134.000 0.000 1.000 N NA
 5824889 5824890 HAPS_1937 HAPS_1938 rplS   TRUE 0.762 25.000 0.000 NA   NA
 5824890 5824891 HAPS_1938 HAPS_1939   mccB TRUE 0.845 -7.000 0.000 NA   NA
 5824891 5824892 HAPS_1939 HAPS_1940 mccB rplS FALSE 0.030 310.000 0.000 1.000 N NA
 5824892 5824893 HAPS_1940 HAPS_1941 rplS trmD TRUE 0.998 14.000 0.567 1.000 Y NA
 5824893 5824894 HAPS_1941 HAPS_1942 trmD rimM TRUE 0.994 49.000 0.672 1.000 Y NA
 5824894 5824895 HAPS_1942 HAPS_1943 rimM rpsP TRUE 0.991 28.000 0.342 0.019 Y NA
 5824895 5824896 HAPS_1943 HAPS_1944 rpsP   TRUE 0.910 10.000 0.000 NA   NA
 5824896 5824897 HAPS_1944 HAPS_1945   nhaC FALSE 0.118 155.000 0.000 NA   NA
 5824897 5824898 HAPS_1945 HAPS_1946 nhaC   FALSE 0.046 240.000 0.000 NA   NA
 5824898 5824899 HAPS_1946 HAPS_1947     TRUE 0.682 -46.000 0.000 NA   NA
 5824902 5824903 HAPS_1950 HAPS_1951 hsdS tir TRUE 0.784 19.000 0.000 1.000   NA
 5824903 5824904 HAPS_1951 HAPS_1952 tir hsdR TRUE 0.666 -996.000 0.000 NA   NA
 5824904 5824905 HAPS_1952 HAPS_1953 hsdR   TRUE 0.807 -10.000 0.000 NA   NA
 5824905 5824906 HAPS_1953 HAPS_1954   ecoRIM FALSE 0.031 291.000 0.000 NA   NA
 5824906 5824907 HAPS_1954 HAPS_1955 ecoRIM hnh TRUE 0.955 32.000 0.200 0.013   NA
 5824908 5824909 HAPS_1956 HAPS_1957 bcgIB mod TRUE 0.831 18.000 0.000 NA   NA
 5824912 5824913 HAPS_1960 HAPS_1961 asnC udp TRUE 0.489 112.000 0.019 1.000 N NA
 5824913 5824914 HAPS_1961 HAPS_1962 udp   FALSE 0.097 174.000 0.000 NA   NA
 5824914 5824915 HAPS_1962 HAPS_1963   trmA2 TRUE 0.874 53.000 0.049 NA   NA
 5824915 5824916 HAPS_1963 HAPS_1964 trmA2   FALSE 0.296 76.000 0.000 NA   NA
 5824916 5824917 HAPS_1964 HAPS_1965     FALSE 0.289 77.000 0.000 NA   NA
 5824917 5824918 HAPS_1965 HAPS_1966   rpsL FALSE 0.033 284.000 0.000 NA   NA
 5824918 5824919 HAPS_1966 HAPS_1967 rpsL rpsG TRUE 0.932 130.000 0.620 0.004 Y NA
 5824919 5824920 HAPS_1967 HAPS_1968 rpsG fusA TRUE 0.964 98.000 0.579 1.000 Y NA
 5824920 5824921 HAPS_1968 HAPS_1969 fusA tuf TRUE 0.960 68.000 0.400 0.001 Y NA
 5824922 5824923 HAPS_1970 HAPS_1971   rlmB TRUE 0.669 -734.000 0.000 NA   NA
 5824923 5824924 HAPS_1971 HAPS_1972 rlmB prfC TRUE 0.355 138.000 0.000 1.000 Y NA
 5824924 5824925 HAPS_1972 HAPS_1973 prfC apaH FALSE 0.153 128.000 0.000 NA   NA
 5824925 5824926 HAPS_1973 HAPS_1974 apaH nadR TRUE 0.990 -3.000 0.137 NA   NA
 5824929 5824930 HAPS_1977 HAPS_1978 napA purL FALSE 0.028 275.000 0.000 1.000   NA
 5824930 5824931 HAPS_1978 HAPS_1979 purL   TRUE 0.419 63.000 0.000 NA   NA
 5824931 5824932 HAPS_1979 HAPS_1980     FALSE 0.018 457.000 0.000 NA   NA
 5824933 5824934 HAPS_1981 HAPS_1982 lapB valS TRUE 0.342 70.000 0.000 NA   NA
 5824934 5824935 HAPS_1982 HAPS_1983 valS hindIIIM TRUE 0.371 101.000 0.002 1.000 N NA
 5824935 5824936 HAPS_1983 HAPS_1984 hindIIIM hindIIIR TRUE 0.727 -22.000 0.000 NA   NA
 5824936 5824937 HAPS_1984 HAPS_1985 hindIIIR   FALSE 0.025 335.000 0.000 NA   NA
 5824937 5824938 HAPS_1985 HAPS_1986   fic TRUE 0.992 -13.000 0.500 NA   NA
 5824938 5824939 HAPS_1986 HAPS_1987 fic elaA-1 TRUE 0.807 -10.000 0.000 NA   NA
 5824939 5824940 HAPS_1987 HAPS_1988 elaA-1 elaA-2 TRUE 0.760 -15.000 0.000 NA   NA
 5824940 5824941 HAPS_1988 HAPS_1989 elaA-2   TRUE 0.885 12.000 0.000 NA   NA
 5824941 5824942 HAPS_1989 HAPS_1990     TRUE 0.367 68.000 0.000 NA   NA
 5824944 5824945 HAPS_1992 HAPS_1993 trpA trpB TRUE 0.999 -3.000 0.947 0.001 Y NA
 5824945 5824946 HAPS_1993 HAPS_1994 trpB trpC TRUE 0.990 20.000 0.221 0.001 Y NA
 5824946 5824947 HAPS_1994 HAPS_1995 trpC trpD TRUE 0.997 13.000 0.293 1.000 Y NA
 5824947 5824948 HAPS_1995 HAPS_1996 trpD trpG TRUE 0.997 2.000 0.083 1.000 Y NA
 5824948 5824949 HAPS_1996 HAPS_1997 trpG trpE TRUE 0.998 13.000 0.703 0.001 Y NA
 5824949 5824950 HAPS_1997 HAPS_1998 trpE   FALSE 0.030 311.000 0.000 1.000 N NA
 5824950 5824951 HAPS_1998 HAPS_1999     FALSE 0.136 143.000 0.000 NA   NA
 5824951 5824952 HAPS_1999 HAPS_2000     TRUE 0.866 -6.000 0.000 NA   NA
 5824952 5824953 HAPS_2000 HAPS_2001   rluB TRUE 0.334 71.000 0.000 NA   NA
 5824953 5824954 HAPS_2001 HAPS_2002 rluB sua5 TRUE 0.695 168.000 0.075 NA Y NA
 5824955 5824956 HAPS_2003 HAPS_2004   snaA TRUE 0.352 69.000 0.000 NA   NA
 5824958 5824959 HAPS_2006 HAPS_2007 clpP clpX TRUE 0.999 7.000 0.352 1.000 Y NA
 5824960 5824961 HAPS_2008 HAPS_2009 dapE pilD FALSE 0.219 84.000 0.000 1.000   NA
 5824961 5824962 HAPS_2009 HAPS_2010 pilD pilC TRUE 0.986 -3.000 0.100 1.000   NA
 5824962 5824963 HAPS_2010 HAPS_2011 pilC pilB TRUE 0.998 -7.000 0.571 1.000 Y NA
 5824963 5824964 HAPS_2011 HAPS_2012 pilB   FALSE 0.019 353.000 0.000 1.000   NA
 5824964 5824965 HAPS_2012 HAPS_2013   pilA FALSE 0.035 273.000 0.000 NA   NA
 5824967 5824968 HAPS_2015 HAPS_2016 gmk   TRUE 0.363 69.000 0.000 1.000 N NA
 5824969 5824970 HAPS_2017 HAPS_2018   rep TRUE 0.895 -3.000 0.000 NA   NA
 5824972 5824973 HAPS_2020 HAPS_2021     FALSE 0.058 212.000 0.000 NA   NA
 5824973 5824974 HAPS_2021 HAPS_2022     FALSE 0.016 591.000 0.000 NA   NA
 5824974 5824975 HAPS_2022 HAPS_2023     TRUE 0.778 24.000 0.000 NA   NA
 5824975 5824976 HAPS_2023 HAPS_2024     TRUE 0.342 70.000 0.000 NA   NA
 5824976 5824977 HAPS_2024 HAPS_2025     FALSE 0.018 460.000 0.000 NA   NA
 5824977 5824978 HAPS_2025 HAPS_2026     FALSE 0.095 175.000 0.000 NA   NA
 5824979 5824980 HAPS_2027 HAPS_2028   yibK FALSE 0.023 365.000 0.000 NA   NA
 5824980 5824981 HAPS_2028 HAPS_2029 yibK   TRUE 0.983 4.000 0.012 1.000 N NA
 5824981 5824982 HAPS_2029 HAPS_2030   rsmC FALSE 0.036 150.000 0.000 0.001 N NA
 5824983 5824984 HAPS_2031 HAPS_2032 holD   TRUE 0.941 2.000 0.000 NA   NA
 5824984 5824985 HAPS_2032 HAPS_2033   rimI FALSE 0.045 242.000 0.000 NA   NA
 5824985 5824986 HAPS_2033 HAPS_2034 rimI hipA FALSE 0.180 112.000 0.000 NA   NA
 5824986 5824987 HAPS_2034 HAPS_2035 hipA   TRUE 0.999 0.000 0.625 NA   NA
 5824987 5824988 HAPS_2035 HAPS_2036   srmB TRUE 0.672 29.000 0.000 1.000   NA
 5824988 5824989 HAPS_2036 HAPS_2037 srmB lolB FALSE 0.168 121.000 0.000 1.000 N NA
 5824989 5824990 HAPS_2037 HAPS_2038 lolB ispE TRUE 0.995 2.000 0.157 1.000 N NA
 5824990 5824991 HAPS_2038 HAPS_2039 ispE prsA TRUE 0.951 28.000 0.053 1.000 N NA
 5824991 5824992 HAPS_2039 HAPS_2040 prsA pyrD FALSE 0.230 243.000 0.003 1.000 Y NA
 5824993 5824994 HAPS_2041 HAPS_2042     FALSE 0.196 102.000 0.000 NA   NA
 5824994 5824995 HAPS_2042 HAPS_2043   crp FALSE 0.041 255.000 0.000 NA   NA
 5824995 5824996 HAPS_2043 HAPS_2044 crp   TRUE 0.843 67.000 0.087 NA   NA
 5824996 5824997 HAPS_2044 HAPS_2045   slmA TRUE 0.989 8.000 0.058 NA   NA
 5824997 5824998 HAPS_2045 HAPS_2046 slmA dut TRUE 0.989 9.000 0.060 1.000 N NA
 5824998 5824999 HAPS_2046 HAPS_2047 dut   TRUE 0.751 26.000 0.000 NA   NA
 5824999 5825000 HAPS_2047 HAPS_2048   dfp TRUE 0.910 10.000 0.000 NA   NA
 5825001 5825002 HAPS_2049 HAPS_2050 radC rpmB TRUE 0.317 126.000 0.003 1.000 N NA
 5825002 5825003 HAPS_2050 HAPS_2051 rpmB rpmG TRUE 0.997 12.000 0.332 0.019 Y NA
 5825003 5825004 HAPS_2051 HAPS_2052 rpmG frpB FALSE 0.026 333.000 0.000 NA   NA
 5825004 5825005 HAPS_2052 HAPS_2053 frpB   FALSE 0.104 166.000 0.000 NA   NA
 5825005 5825006 HAPS_2053 HAPS_2054   cheY TRUE 0.882 61.000 0.095 NA   NA
 5825006 5825007 HAPS_2054 HAPS_2055 cheY qseC TRUE 0.997 -13.000 0.526 1.000 Y NA
 5825007 5825008 HAPS_2055 HAPS_2056 qseC   TRUE 0.419 63.000 0.000 NA   NA
 5825008 5825009 HAPS_2056 HAPS_2057   groES FALSE 0.058 213.000 0.000 NA   NA
 5825009 5825010 HAPS_2057 HAPS_2058 groES groEL TRUE 0.952 111.000 0.631 0.085 Y NA
 5825010 5825011 HAPS_2058 HAPS_2059 groEL   FALSE 0.107 167.000 0.000 1.000 N NA
 5825011 5825012 HAPS_2059 HAPS_2060     TRUE 0.351 76.000 0.000 NA N NA
 5825012 5825013 HAPS_2060 HAPS_2061     TRUE 0.999 -3.000 0.500 NA Y NA
 5825013 5825014 HAPS_2061 HAPS_2062     FALSE 0.079 191.000 0.000 NA   NA
 5825015 5825016 HAPS_2063 HAPS_2064 sclB11   FALSE 0.022 373.000 0.000 NA   NA
 5825016 5825017 HAPS_2064 HAPS_2065   erpA FALSE 0.027 321.000 0.000 NA   NA
 5825017 5825018 HAPS_2065 HAPS_2066 erpA obgE TRUE 0.336 111.000 0.002 NA   NA
 5825018 5825019 HAPS_2066 HAPS_2067 obgE   TRUE 0.917 25.000 0.015 1.000   NA
 5825019 5825020 HAPS_2067 HAPS_2068     TRUE 0.839 2.000 0.000 0.060   NA
 5825020 5825021 HAPS_2068 HAPS_2069   rpmA FALSE 0.236 141.000 0.002 1.000   NA
 5825021 5825022 HAPS_2069 HAPS_2070 rpmA rplU TRUE 0.997 21.000 0.667 0.018 Y NA
 5825022 5825023 HAPS_2070 HAPS_2071 rplU nagA FALSE 0.074 198.000 0.000 1.000 N NA
 5825023 5825024 HAPS_2071 HAPS_2072 nagA nagB TRUE 0.998 10.000 0.557 0.001 Y NA
 5825024 5825025 HAPS_2072 HAPS_2073 nagB dapF FALSE 0.021 400.000 0.000 1.000 N NA
 5825027 5825028 HAPS_2075 HAPS_2076 panF   TRUE 0.996 -10.000 0.682 NA   NA
 5825028 5825029 HAPS_2076 HAPS_2077   metJ TRUE 0.832 57.000 0.034 NA   NA
 5825034 5825035 HAPS_2082 HAPS_2083 glpT fklB TRUE 0.930 7.000 0.000 NA   NA
 5825036 5825037 HAPS_2084 HAPS_2086 tpx   TRUE 0.895 -3.000 0.000 NA   NA
 5825038 5825039 HAPS_2085 HAPS_2087 plsC sufI TRUE 0.995 2.000 0.154 1.000 N NA
 5825039 5825040 HAPS_2087 HAPS_2088 sufI accA TRUE 0.352 121.000 0.004 1.000 N NA
 5825041 5825042 HAPS_2089 HAPS_2090     TRUE 0.848 16.000 0.000 NA   NA
 5825042 5825043 HAPS_2090 HAPS_2091     TRUE 0.913 -1.000 0.000 NA   NA
 5825048 5825049 HAPS_2096 HAPS_2097   yckJ TRUE 0.978 68.000 0.594 0.031 Y NA
 5825049 5825050 HAPS_2097 HAPS_2098 yckJ yckI TRUE 0.999 3.000 0.481 1.000 Y NA
 5825050 5825051 HAPS_2098 HAPS_2099 yckI   FALSE 0.060 211.000 0.000 NA   NA
 5825051 5825052 HAPS_2099 HAPS_2100     FALSE 0.157 124.000 0.000 NA   NA
 5825053 5825054 HAPS_2101 HAPS_2102 gltD gltB FALSE 0.093 217.000 0.000 0.001 Y NA
 5825057 5825058 HAPS_2105 HAPS_2106     FALSE 0.240 89.000 0.000 NA   NA
 5825058 5825059 HAPS_2106 HAPS_2107     FALSE 0.021 390.000 0.000 NA   NA
 5825059 5825060 HAPS_2107 HAPS_2108     FALSE 0.095 175.000 0.000 NA   NA
 5825060 5825061 HAPS_2108 HAPS_2109     FALSE 0.175 115.000 0.000 NA   NA
 5825062 5825063 HAPS_2110 HAPS_2111   ilvE TRUE 0.724 69.000 0.017 NA N NA
 5825064 5825065 HAPS_2112 HAPS_2113 gcvA   TRUE 0.952 22.000 0.036 1.000   NA
 5825065 5825066 HAPS_2113 HAPS_2114   cysB TRUE 0.738 66.000 0.028 1.000   NA
 5825066 5825067 HAPS_2114 HAPS_2115 cysB   TRUE 0.545 104.000 0.028 NA   NA
 5825067 5825068 HAPS_2115 HAPS_2116   icc FALSE 0.017 538.000 0.000 NA   NA
 5825069 5825070 HAPS_2117 HAPS_2118 ldhA   TRUE 0.910 10.000 0.000 NA   NA
 5825070 5825071 HAPS_2118 HAPS_2119   dcm TRUE 0.992 -3.000 0.188 NA   NA
 5825071 5825072 HAPS_2119 HAPS_2120 dcm ispG TRUE 0.930 8.000 0.000 1.000 N NA
 5825072 5825073 HAPS_2120 HAPS_2121 ispG   TRUE 0.996 2.000 0.233 1.000   NA