MicrobesOnline Operon Predictions for Streptococcus pneumoniae CGSP14

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 5759323 5759324 SPCG_0001 SPCG_0002 dnaA dnaN TRUE 0.664 159.000 0.328 1.000 Y NA
 5759324 5759325 SPCG_0002 SPCG_0003 dnaN   TRUE 0.893 11.000 0.009 NA   NA
 5759325 5759326 SPCG_0003 SPCG_0004     TRUE 0.603 75.000 0.064 NA   NA
 5759326 5759327 SPCG_0004 SPCG_0005   pth TRUE 0.871 71.000 0.184 1.000 Y NA
 5759327 5759328 SPCG_0005 SPCG_0006 pth mfd TRUE 0.979 1.000 0.137 1.000 N NA
 5759328 5759329 SPCG_0006 SPCG_0007 mfd   TRUE 0.725 58.000 0.024 1.000 N NA
 5759329 5759330 SPCG_0007 SPCG_0008     TRUE 0.974 -7.000 0.053 1.000 N NA
 5759330 5759331 SPCG_0008 SPCG_0009     TRUE 0.715 51.000 0.011 NA N NA
 5759331 5759332 SPCG_0009 SPCG_0010     TRUE 0.957 -3.000 0.014 NA N NA
 5759332 5759333 SPCG_0010 SPCG_0011   hgt TRUE 0.974 4.000 0.067 0.062 N NA
 5759333 5759334 SPCG_0011 SPCG_0012 hgt ftsH TRUE 0.967 16.000 0.192 1.000 N NA
 5759334 5759335 SPCG_0012 SPCG_0013 ftsH comX1 FALSE 0.214 122.000 0.006 1.000   NA
 5759335 5759336 SPCG_0013 SPCG_t01 comX1   FALSE 0.131 94.000 0.000 NA   NA
 5759336 5759337 SPCG_t01 SPCG_s01     FALSE 0.019 298.000 0.000 NA   NA
 5759337 5759338 SPCG_s01 SPCG_t02     FALSE 0.080 139.000 0.000 NA   NA
 5759338 5759339 SPCG_t02 SPCG_s02     FALSE 0.093 125.000 0.000 NA   NA
 5759339 5759340 SPCG_s02 SPCG_s03     FALSE 0.257 70.000 0.000 NA   NA
 5759340 5759341 SPCG_s03 SPCG_t03     TRUE 0.851 -19.000 0.000 NA   NA
 5759341 5759342 SPCG_t03 SPCG_0014     FALSE 0.143 90.000 0.000 NA   NA
 5759342 5759343 SPCG_0014 SPCG_0015     FALSE 0.006 708.000 0.000 NA   NA
 5759344 5759345 SPCG_0016 SPCG_0017     FALSE 0.033 224.000 0.000 NA   NA
 5759346 5759347 SPCG_0018 SPCG_0019   purA FALSE 0.048 189.000 0.000 NA   NA
 5759347 5759348 SPCG_0019 SPCG_0020 purA   FALSE 0.146 201.000 0.000 1.000 Y NA
 5759348 5759349 SPCG_0020 SPCG_0021   dut FALSE 0.170 186.000 0.000 1.000 Y NA
 5759349 5759350 SPCG_0021 SPCG_0022 dut   TRUE 0.889 -40.000 0.005 NA N NA
 5759350 5759351 SPCG_0022 SPCG_0023   radA FALSE 0.179 113.000 0.003 NA N NA
 5759351 5759352 SPCG_0023 SPCG_0024 radA   TRUE 0.920 4.000 0.009 1.000 N NA
 5759352 5759353 SPCG_0024 SPCG_0025     TRUE 0.950 21.000 0.111 NA   NA
 5759353 5759354 SPCG_0025 SPCG_0026     TRUE 0.855 -18.000 0.000 NA   NA
 5759354 5759355 SPCG_0026 SPCG_0027     TRUE 0.970 -24.000 0.000 0.096 Y NA
 5759355 5759356 SPCG_0027 SPCG_0028     TRUE 0.782 6.000 0.000 NA   NA
 5759356 5759357 SPCG_0028 SPCG_0029   prsA FALSE 0.131 94.000 0.000 NA   NA
 5759357 5759358 SPCG_0029 SPCG_0030 prsA   FALSE 0.098 118.000 0.000 NA   NA
 5759358 5759359 SPCG_0030 SPCG_0031     FALSE 0.035 219.000 0.000 NA   NA
 5759359 5759360 SPCG_0031 SPCG_0032   polA FALSE 0.006 745.000 0.000 NA   NA
 5759360 5759361 SPCG_0032 SPCG_0033 polA   FALSE 0.297 85.000 0.005 NA   NA
 5759362 5759363 SPCG_0034 SPCG_0035     TRUE 0.777 -52.000 0.000 NA   NA
 5759366 5759367 SPCG_0038 SPCG_0039 recO plsX TRUE 0.957 -3.000 0.011 1.000 N NA
 5759367 5759368 SPCG_0039 SPCG_0040 plsX acpP TRUE 0.983 6.000 0.017 0.008 Y NA
 5759368 5759369 SPCG_0040 SPCG_0041 acpP   TRUE 0.576 43.000 0.000 NA   NA
 5759369 5759370 SPCG_0041 SPCG_0042     FALSE 0.105 110.000 0.000 NA   NA
 5759370 5759371 SPCG_0042 SPCG_0043     FALSE 0.042 202.000 0.000 NA   NA
 5759371 5759372 SPCG_0043 SPCG_0044   comA FALSE 0.006 688.000 0.000 NA   NA
 5759372 5759373 SPCG_0044 SPCG_0045 comA comB TRUE 0.987 13.000 0.444 0.071   NA
 5759373 5759374 SPCG_0045 SPCG_0046 comB purC FALSE 0.190 128.000 0.004 1.000   NA
 5759374 5759375 SPCG_0046 SPCG_0047 purC purL FALSE 0.342 199.000 0.043 1.000 Y NA
 5759375 5759376 SPCG_0047 SPCG_0048 purL purF TRUE 0.604 93.000 0.024 1.000 Y NA
 5759376 5759377 SPCG_0048 SPCG_0049 purF purM TRUE 0.977 37.000 0.248 1.000 Y NA
 5759377 5759378 SPCG_0049 SPCG_0050 purM purN TRUE 0.985 -3.000 0.000 0.003 Y NA
 5759378 5759379 SPCG_0050 SPCG_0051 purN vanZ FALSE 0.146 84.000 0.000 NA N NA
 5759379 5759380 SPCG_0051 SPCG_0052 vanZ purH TRUE 0.883 4.000 0.002 NA N NA
 5759380 5759381 SPCG_0052 SPCG_0053 purH purD TRUE 0.720 122.000 0.238 1.000 Y NA
 5759381 5759382 SPCG_0053 SPCG_0054 purD   FALSE 0.025 257.000 0.000 NA   NA
 5759382 5759383 SPCG_0054 SPCG_0055   purE TRUE 0.888 -3.000 0.000 NA   NA
 5759383 5759384 SPCG_0055 SPCG_0056 purE purK TRUE 0.982 -52.000 0.008 0.001 Y NA
 5759384 5759385 SPCG_0056 SPCG_0057 purK   TRUE 0.760 10.000 0.000 NA   NA
 5759385 5759386 SPCG_0057 SPCG_0058   purB TRUE 0.480 63.000 0.002 NA   NA
 5759387 5759388 SPCG_0059 SPCG_0060 strH   FALSE 0.033 227.000 0.000 1.000 N NA
 5759389 5759390 SPCG_0061 SPCG_0062 bgaC   TRUE 0.994 -3.000 0.190 1.000 Y NA
 5759390 5759391 SPCG_0062 SPCG_0063     TRUE 0.995 28.000 0.810 0.036 Y NA
 5759391 5759392 SPCG_0063 SPCG_0064     TRUE 0.969 -28.000 0.000 0.036 Y NA
 5759392 5759393 SPCG_0064 SPCG_0065     TRUE 0.958 7.000 0.000 0.036 Y NA
 5759393 5759394 SPCG_0065 SPCG_0066   agaS FALSE 0.064 298.000 0.022 1.000 N NA
 5759394 5759395 SPCG_0066 SPCG_0067 agaS galM FALSE 0.203 122.000 0.000 0.032 N NA
 5759395 5759396 SPCG_0067 SPCG_0068 galM   FALSE 0.040 207.000 0.000 NA   NA
 5759396 5759397 SPCG_0068 SPCG_0069     FALSE 0.071 150.000 0.000 NA   NA
 5759398 5759399 SPCG_0070 SPCG_0071     TRUE 0.876 -10.000 0.000 NA   NA
 5759400 5759401 SPCG_0072 SPCG_0073     FALSE 0.026 256.000 0.000 NA   NA
 5759401 5759402 SPCG_0073 SPCG_0074   trkH FALSE 0.059 169.000 0.000 NA   NA
 5759402 5759403 SPCG_0074 SPCG_0075 trkH trkA TRUE 0.998 -7.000 0.490 0.005 Y NA
 5759403 5759404 SPCG_0075 SPCG_0076 trkA   FALSE 0.084 135.000 0.000 NA   NA
 5759404 5759405 SPCG_0076 SPCG_0077     FALSE 0.355 62.000 0.000 NA   NA
 5759407 5759408 SPCG_0078 SPCG_0080     FALSE 0.047 192.000 0.000 NA   NA
 5759408 5759409 SPCG_0080 SPCG_0081     TRUE 0.463 167.000 0.333 1.000   NA
 5759409 5759410 SPCG_0081 SPCG_0082     TRUE 0.997 -3.000 0.500 1.000 Y NA
 5759410 5759411 SPCG_0082 SPCG_0083   rpsD FALSE 0.080 195.000 0.002 1.000 N NA
 5759413 5759414 SPCG_0085 SPCG_0086     FALSE 0.183 80.000 0.000 NA   NA
 5759414 5759415 SPCG_0086 SPCG_0087     FALSE 0.020 289.000 0.000 NA   NA
 5759415 5759416 SPCG_0087 SPCG_0088     TRUE 0.997 -37.000 0.917 0.050 Y NA
 5759416 5759417 SPCG_0088 SPCG_0089     TRUE 0.983 41.000 0.250 0.050 Y NA
 5759417 5759418 SPCG_0089 SPCG_0090     FALSE 0.023 272.000 0.000 NA   NA
 5759418 5759419 SPCG_0090 SPCG_0091     FALSE 0.052 182.000 0.000 NA   NA
 5759420 5759421 SPCG_0092 SPCG_0093     TRUE 0.895 63.000 0.500 NA   NA
 5759421 5759422 SPCG_0093 SPCG_0094     TRUE 0.963 -58.000 0.150 NA   NA
 5759422 5759423 SPCG_0094 SPCG_0095     TRUE 0.986 -13.000 0.250 NA   NA
 5759423 5759424 SPCG_0095 SPCG_0096     FALSE 0.340 139.000 0.100 NA N NA
 5759425 5759426 SPCG_0097 SPCG_0098     TRUE 0.838 42.000 0.000 NA Y NA
 5759427 5759428 SPCG_0099 SPCG_0100     TRUE 0.511 50.000 0.000 NA   NA
 5759428 5759429 SPCG_0100 SPCG_0101     TRUE 0.923 22.000 0.033 1.000   NA
 5759429 5759430 SPCG_0101 SPCG_0102     TRUE 0.994 9.000 0.221 0.001 Y NA
 5759433 5759434 SPCG_0105 SPCG_0106     TRUE 0.975 19.000 0.353 NA   NA
 5759434 5759435 SPCG_0106 SPCG_0107     TRUE 0.993 -3.000 0.520 NA   NA
 5759435 5759436 SPCG_0107 SPCG_0108     FALSE 0.110 105.000 0.000 1.000 N NA
 5759436 5759437 SPCG_0108 SPCG_0109     TRUE 0.897 -34.000 0.002 1.000   NA
 5759439 5759440 SPCG_0111 SPCG_0112     TRUE 0.843 -22.000 0.000 NA   NA
 5759440 5759441 SPCG_0112 SPCG_0113     FALSE 0.007 594.000 0.000 NA   NA
 5759441 5759442 SPCG_0113 SPCG_0114     FALSE 0.013 383.000 0.000 NA   NA
 5759442 5759443 SPCG_0114 SPCG_0115     FALSE 0.017 315.000 0.000 NA   NA
 5759443 5759444 SPCG_0115 SPCG_0116     FALSE 0.014 358.000 0.000 NA   NA
 5759444 5759445 SPCG_0116 SPCG_0117     FALSE 0.039 208.000 0.000 NA   NA
 5759445 5759446 SPCG_0117 SPCG_0118     TRUE 0.724 23.000 0.000 NA   NA
 5759446 5759447 SPCG_0118 SPCG_0119     TRUE 0.811 -33.000 0.000 NA   NA
 5759447 5759448 SPCG_0119 SPCG_0120   pspA FALSE 0.005 1523.000 0.000 NA   NA
 5759448 5759449 SPCG_0120 SPCG_0121 pspA trmU FALSE 0.015 347.000 0.000 NA   NA
 5759449 5759450 SPCG_0121 SPCG_0122 trmU   FALSE 0.190 114.000 0.003 1.000 N NA
 5759450 5759451 SPCG_0122 SPCG_0123   gidA TRUE 0.880 10.000 0.005 1.000 N NA
 5759452 5759453 SPCG_0124 SPCG_0125     TRUE 0.991 2.000 0.576 NA   NA
 5759455 5759456 SPCG_0127 SPCG_0128     FALSE 0.028 247.000 0.000 NA   NA
 5759456 5759457 SPCG_0128 SPCG_0129     TRUE 0.990 2.000 0.500 NA   NA
 5759458 5759459 SPCG_0130 SPCG_0131   rimI TRUE 0.988 -3.000 0.209 1.000   NA
 5759459 5759460 SPCG_0131 SPCG_0132 rimI gcp TRUE 0.968 -10.000 0.030 1.000   NA
 5759461 5759462 SPCG_0133 SPCG_0134     FALSE 0.040 207.000 0.000 NA   NA
 5759463 5759464 SPCG_0135 SPCG_0136   epsG FALSE 0.090 128.000 0.000 NA   NA
 5759464 5759465 SPCG_0136 SPCG_0137 epsG   TRUE 0.719 24.000 0.000 NA   NA
 5759465 5759466 SPCG_0137 SPCG_0138     TRUE 0.733 10.000 0.000 NA N NA
 5759466 5759467 SPCG_0138 SPCG_0139     TRUE 0.753 -76.000 0.000 NA   NA
 5759467 5759468 SPCG_0139 SPCG_0140     TRUE 0.691 29.000 0.000 NA   NA
 5759468 5759469 SPCG_0140 SPCG_0141     TRUE 0.782 6.000 0.000 NA   NA
 5759469 5759470 SPCG_0141 SPCG_0142   ugd TRUE 0.751 13.000 0.000 NA   NA
 5759470 5759471 SPCG_0142 SPCG_0143 ugd mutR FALSE 0.015 371.000 0.000 1.000   NA
 5759471 5759472 SPCG_0143 SPCG_0144 mutR   FALSE 0.023 270.000 0.000 NA   NA
 5759472 5759473 SPCG_0144 SPCG_0145     TRUE 0.836 60.000 0.154 NA   NA
 5759473 5759474 SPCG_0145 SPCG_0146     TRUE 0.980 -16.000 0.154 NA   NA
 5759474 5759475 SPCG_0146 SPCG_0147     TRUE 0.985 29.000 1.000 NA   NA
 5759475 5759476 SPCG_0147 SPCG_0148     FALSE 0.190 79.000 0.000 NA   NA
 5759476 5759477 SPCG_0148 SPCG_0149     TRUE 0.752 12.000 0.000 NA   NA
 5759477 5759478 SPCG_0149 SPCG_0150     FALSE 0.266 69.000 0.000 NA   NA
 5759478 5759479 SPCG_0150 SPCG_0151     FALSE 0.010 455.000 0.000 NA   NA
 5759479 5759480 SPCG_0151 SPCG_0152     FALSE 0.307 104.000 0.000 NA Y NA
 5759480 5759481 SPCG_0152 SPCG_0153     FALSE 0.060 154.000 0.000 NA N NA
 5759481 5759482 SPCG_0153 SPCG_0154     TRUE 0.683 97.000 0.500 NA N NA
 5759482 5759483 SPCG_0154 SPCG_0155     TRUE 0.971 -7.000 0.042 1.000 N NA
 5759483 5759484 SPCG_0155 SPCG_0156     TRUE 0.997 2.000 0.938 1.000 Y NA
 5759484 5759485 SPCG_0156 SPCG_0157     FALSE 0.113 116.000 0.000 1.000   NA
 5759485 5759486 SPCG_0157 SPCG_0158     FALSE 0.052 182.000 0.000 NA   NA
 5759486 5759487 SPCG_0158 SPCG_0159     TRUE 0.724 23.000 0.000 NA   NA
 5759487 5759488 SPCG_0159 SPCG_0160     TRUE 0.767 16.000 0.000 NA   NA
 5759488 5759489 SPCG_0160 SPCG_0161     TRUE 0.691 29.000 0.000 NA   NA
 5759489 5759490 SPCG_0161 SPCG_0162     FALSE 0.061 178.000 0.000 1.000   NA
 5759490 5759491 SPCG_0162 SPCG_0163     TRUE 0.576 43.000 0.000 NA   NA
 5759491 5759492 SPCG_0163 SPCG_0164     FALSE 0.099 117.000 0.000 NA   NA
 5759492 5759493 SPCG_0164 SPCG_0165     TRUE 0.834 -25.000 0.000 NA   NA
 5759493 5759494 SPCG_0165 SPCG_0166     TRUE 0.760 -67.000 0.000 NA   NA
 5759494 5759495 SPCG_0166 SPCG_0167     TRUE 0.834 3.000 0.000 NA   NA
 5759495 5759496 SPCG_0167 SPCG_0168     TRUE 0.888 -3.000 0.000 NA   NA
 5759496 5759497 SPCG_0168 SPCG_0169     TRUE 0.888 -3.000 0.000 NA   NA
 5759497 5759498 SPCG_0169 SPCG_0170     FALSE 0.022 275.000 0.000 NA   NA
 5759498 5759499 SPCG_0170 SPCG_0171     TRUE 0.991 1.000 0.545 NA   NA
 5759499 5759500 SPCG_0171 SPCG_0172     FALSE 0.022 925.000 0.000 1.000 Y NA
 5759500 5759501 SPCG_0172 SPCG_0173     FALSE 0.014 355.000 0.000 1.000 N NA
 5759501 5759502 SPCG_0173 SPCG_0174     TRUE 0.964 4.000 0.000 0.091 Y NA
 5759504 5759505 SPCG_0176 SPCG_0177     TRUE 0.888 -3.000 0.000 NA   NA
 5759505 5759506 SPCG_0177 SPCG_0178     FALSE 0.010 461.000 0.000 NA   NA
 5759506 5759507 SPCG_0178 SPCG_0179     FALSE 0.173 82.000 0.000 NA   NA
 5759507 5759508 SPCG_0179 SPCG_0180     FALSE 0.011 417.000 0.000 NA   NA
 5759508 5759509 SPCG_0180 SPCG_0181     TRUE 0.624 38.000 0.000 NA   NA
 5759511 5759512 SPCG_0183 SPCG_0184     TRUE 0.975 -54.000 0.286 NA   NA
 5759513 5759514 SPCG_0185 SPCG_0186     FALSE 0.024 265.000 0.000 NA   NA
 5759514 5759515 SPCG_0186 SPCG_0187     TRUE 0.991 -3.000 0.392 NA   NA
 5759517 5759518 SPCG_0189 SPCG_0190 ribE ribA TRUE 0.993 1.000 0.054 0.003 Y NA
 5759518 5759519 SPCG_0190 SPCG_0191 ribA ribC TRUE 0.988 -10.000 0.051 1.000 Y NA
 5759519 5759520 SPCG_0191 SPCG_0192 ribC ribD TRUE 0.996 -15.000 0.456 1.000 Y NA
 5759523 5759524 SPCG_0195 SPCG_0196 tag   TRUE 0.944 -3.000 0.004 NA   NA
 5759525 5759526 SPCG_0197 SPCG_0198     FALSE 0.049 188.000 0.000 NA   NA
 5759526 5759527 SPCG_0198 SPCG_0199     TRUE 0.825 -28.000 0.000 NA   NA
 5759527 5759528 SPCG_0199 SPCG_0200     TRUE 0.976 -9.000 0.072 NA   NA
 5759529 5759530 SPCG_0201 SPCG_0202 uvrA pepP TRUE 0.951 -7.000 0.008 1.000 N NA
 5759530 5759531 SPCG_0202 SPCG_0203 pepP spxA FALSE 0.087 132.000 0.000 1.000 N NA
 5759531 5759532 SPCG_0203 SPCG_0204 spxA   TRUE 0.827 66.000 0.267 NA   NA
 5759532 5759533 SPCG_0204 SPCG_0205     FALSE 0.358 87.000 0.016 NA   NA
 5759533 5759534 SPCG_0205 SPCG_0206     TRUE 0.987 4.000 0.537 NA   NA
 5759534 5759535 SPCG_0206 SPCG_0207     TRUE 0.985 16.000 0.651 NA   NA
 5759535 5759536 SPCG_0207 SPCG_0208   folC FALSE 0.058 302.000 0.019 NA   NA
 5759536 5759537 SPCG_0208 SPCG_0209 folC   TRUE 0.986 -3.000 0.200 NA   NA
 5759537 5759538 SPCG_0209 SPCG_0210   cls FALSE 0.075 146.000 0.000 NA   NA
 5759538 5759539 SPCG_0210 SPCG_0211 cls   FALSE 0.030 240.000 0.000 NA   NA
 5759539 5759540 SPCG_0211 SPCG_0212     FALSE 0.359 114.000 0.057 NA   NA
 5759540 5759541 SPCG_0212 SPCG_0213     TRUE 0.940 12.000 0.062 NA   NA
 5759541 5759542 SPCG_0213 SPCG_0214     TRUE 0.936 44.000 0.292 NA   NA
 5759542 5759543 SPCG_0214 SPCG_0215   nrdD TRUE 0.985 -7.000 0.159 1.000   NA
 5759543 5759544 SPCG_0215 SPCG_0216 nrdD   TRUE 0.969 -3.000 0.029 1.000 N NA
 5759544 5759545 SPCG_0216 SPCG_0217   rpsJ FALSE 0.024 267.000 0.000 1.000 N NA
 5759545 5759546 SPCG_0217 SPCG_0218 rpsJ rplC TRUE 0.679 216.000 0.467 0.034 Y NA
 5759546 5759547 SPCG_0218 SPCG_0219 rplC rplD TRUE 0.994 25.000 0.544 0.024 Y NA
 5759547 5759548 SPCG_0219 SPCG_0220 rplD rplW TRUE 0.997 0.000 0.307 0.024 Y NA
 5759548 5759549 SPCG_0220 SPCG_0221 rplW rplB TRUE 0.997 18.000 0.849 0.033 Y NA
 5759549 5759550 SPCG_0221 SPCG_0222 rplB rpsS TRUE 0.933 92.000 0.820 0.034 Y NA
 5759550 5759551 SPCG_0222 SPCG_0223 rpsS rplV TRUE 0.996 12.000 0.769 0.034 Y NA
 5759551 5759552 SPCG_0223 SPCG_0224 rplV rpsC TRUE 0.996 13.000 0.719 0.034 Y NA
 5759552 5759553 SPCG_0224 SPCG_0225 rpsC rplP TRUE 0.997 4.000 0.828 0.034 Y NA
 5759553 5759554 SPCG_0225 SPCG_0226 rplP rpmC TRUE 0.996 10.000 0.802 0.024 Y NA
 5759554 5759555 SPCG_0226 SPCG_0227 rpmC rpsQ TRUE 0.996 25.000 0.828 0.024 Y NA
 5759555 5759556 SPCG_0227 SPCG_0228 rpsQ rplN TRUE 0.995 26.000 0.791 0.034 Y NA
 5759556 5759557 SPCG_0228 SPCG_0229 rplN rplX TRUE 0.954 78.000 0.810 0.034 Y NA
 5759557 5759558 SPCG_0229 SPCG_0230 rplX rplE TRUE 0.995 24.000 0.758 0.024 Y NA
 5759558 5759559 SPCG_0230 SPCG_0231 rplE rpsN TRUE 0.993 18.000 0.309 0.024 Y NA
 5759559 5759560 SPCG_0231 SPCG_0232 rpsN rpsH TRUE 0.634 214.000 0.295 0.024 Y NA
 5759560 5759561 SPCG_0232 SPCG_0233 rpsH rplF TRUE 0.812 192.000 0.808 0.024 Y NA
 5759561 5759562 SPCG_0233 SPCG_0234 rplF rplR TRUE 0.991 45.000 0.815 0.024 Y NA
 5759562 5759563 SPCG_0234 SPCG_0235 rplR rpsE TRUE 0.996 18.000 0.814 0.034 Y NA
 5759563 5759564 SPCG_0235 SPCG_0236 rpsE rpmD TRUE 0.997 -28.000 0.789 0.034 Y NA
 5759564 5759565 SPCG_0236 SPCG_0237 rpmD rplO TRUE 0.875 145.000 0.653 0.005 Y NA
 5759565 5759566 SPCG_0237 SPCG_0238 rplO secY TRUE 0.985 13.000 0.730 1.000 N NA
 5759566 5759567 SPCG_0238 SPCG_0239 secY adk TRUE 0.446 151.000 0.241 1.000 N NA
 5759567 5759568 SPCG_0239 SPCG_0240 adk infA TRUE 0.721 63.000 0.059 1.000 N NA
 5759568 5759569 SPCG_0240 SPCG_0241 infA rpsM TRUE 0.606 159.000 0.075 0.033 Y NA
 5759569 5759570 SPCG_0241 SPCG_0242 rpsM rpsK TRUE 0.997 18.000 0.810 0.024 Y NA
 5759570 5759571 SPCG_0242 SPCG_0243 rpsK rpoA TRUE 0.942 43.000 0.308 1.000 N NA
 5759571 5759572 SPCG_0243 SPCG_0244 rpoA rplQ TRUE 0.988 12.000 0.873 1.000 N NA
 5759572 5759573 SPCG_0244 SPCG_0245 rplQ   FALSE 0.101 172.000 0.002 1.000 N NA
 5759573 5759574 SPCG_0245 SPCG_0246     TRUE 0.955 47.000 0.569 NA   NA
 5759574 5759575 SPCG_0246 SPCG_0247   gpmB FALSE 0.118 187.000 0.008 NA   NA
 5759576 5759577 SPCG_0248 SPCG_0250     TRUE 0.932 -15.000 0.000 0.047 N NA
 5759577 5759578 SPCG_0250 SPCG_0249     TRUE 0.834 -25.000 0.000 NA   NA
 5759580 5759581 SPCG_0252 SPCG_0253     TRUE 0.729 28.000 0.000 1.000   NA
 5759581 5759582 SPCG_0253 SPCG_0254     FALSE 0.224 75.000 0.000 NA   NA
 5759582 5759583 SPCG_0254 SPCG_0255     FALSE 0.076 145.000 0.000 NA   NA
 5759583 5759584 SPCG_0255 SPCG_0256   pflE FALSE 0.010 504.000 0.000 1.000   NA
 5759585 5759586 SPCG_0257 SPCG_0258 deoR   TRUE 0.990 13.000 0.188 0.038 Y NA
 5759586 5759587 SPCG_0258 SPCG_0259     FALSE 0.223 195.000 0.091 1.000 N NA
 5759587 5759588 SPCG_0259 SPCG_0260     TRUE 0.992 46.000 0.889 0.023 Y NA
 5759588 5759589 SPCG_0260 SPCG_0261     TRUE 0.999 -7.000 0.889 0.023 Y NA
 5759589 5759590 SPCG_0261 SPCG_0262   pflF TRUE 0.382 142.000 0.132 1.000 N NA
 5759590 5759591 SPCG_0262 SPCG_0263 pflF talC TRUE 0.976 19.000 0.368 1.000 N NA
 5759591 5759592 SPCG_0263 SPCG_0264 talC gldA TRUE 0.969 18.000 0.211 1.000 N NA
 5759592 5759593 SPCG_0264 SPCG_0265 gldA leuS FALSE 0.010 455.000 0.000 1.000 N NA
 5759593 5759594 SPCG_0265 SPCG_0266 leuS   FALSE 0.155 195.000 0.000 1.000 Y NA
 5759594 5759595 SPCG_0266 SPCG_0267     TRUE 0.963 12.000 0.037 0.014   NA
 5759597 5759598 SPCG_0269 SPCG_0270 ruvB   TRUE 0.900 -34.000 0.004 NA   NA
 5759598 5759599 SPCG_0270 SPCG_0271   uppS FALSE 0.037 213.000 0.000 NA   NA
 5759599 5759600 SPCG_0271 SPCG_0272 uppS cdsA TRUE 0.982 9.000 0.113 1.000 Y NA
 5759600 5759601 SPCG_0272 SPCG_0273 cdsA eep TRUE 0.922 22.000 0.040 1.000 N NA
 5759601 5759602 SPCG_0273 SPCG_0274 eep proS TRUE 0.949 13.000 0.095 1.000 N NA
 5759602 5759603 SPCG_0274 SPCG_0275 proS   FALSE 0.209 99.000 0.002 1.000 N NA
 5759603 5759604 SPCG_0275 SPCG_0276   glmS FALSE 0.092 193.000 0.003 1.000 N NA
 5759604 5759605 SPCG_0276 SPCG_0277 glmS   FALSE 0.086 119.000 0.000 NA N NA
 5759607 5759608 SPCG_0279 SPCG_0280     FALSE 0.025 262.000 0.000 NA   NA
 5759608 5759609 SPCG_0280 SPCG_0281     TRUE 0.437 56.000 0.000 NA   NA
 5759609 5759610 SPCG_0281 SPCG_0282   rpsL TRUE 0.867 -13.000 0.000 NA   NA
 5759610 5759611 SPCG_0282 SPCG_0283 rpsL rpsG TRUE 0.992 20.000 0.224 0.005 Y NA
 5759611 5759612 SPCG_0283 SPCG_0284 rpsG fusA FALSE 0.327 425.000 0.579 1.000 Y NA
 5759612 5759613 SPCG_0284 SPCG_0285 fusA polC FALSE 0.205 104.000 0.003 1.000 N NA
 5759613 5759614 SPCG_0285 SPCG_0286 polC   FALSE 0.314 102.000 0.000 NA Y NA
 5759614 5759615 SPCG_0286 SPCG_0287     TRUE 0.991 -7.000 0.400 NA   NA
 5759615 5759616 SPCG_0287 SPCG_0288     TRUE 0.739 21.000 0.000 NA   NA
 5759616 5759617 SPCG_0288 SPCG_0289   pepS TRUE 0.944 22.000 0.095 NA   NA
 5759617 5759618 SPCG_0289 SPCG_0290 pepS   TRUE 0.968 10.000 0.190 1.000   NA
 5759618 5759619 SPCG_0290 SPCG_0291   rsuA FALSE 0.030 256.000 0.000 1.000   NA
 5759619 5759620 SPCG_0291 SPCG_0292 rsuA pepC FALSE 0.141 217.000 0.041 1.000 N NA
 5759621 5759622 SPCG_0293 SPCG_0294 manN manM TRUE 0.995 24.000 0.812 0.033 Y NA
 5759622 5759623 SPCG_0294 SPCG_0295 manM manL TRUE 0.996 28.000 0.943 0.033 Y NA
 5759623 5759624 SPCG_0295 SPCG_0296 manL   FALSE 0.014 400.000 0.000 1.000   NA
 5759624 5759625 SPCG_0296 SPCG_0297   adhP TRUE 0.782 -73.000 0.000 1.000   NA
 5759625 5759626 SPCG_0297 SPCG_0298 adhP   FALSE 0.106 109.000 0.000 NA   NA
 5759626 5759627 SPCG_0298 SPCG_0299     FALSE 0.164 84.000 0.000 NA   NA
 5759628 5759629 SPCG_0300 SPCG_0301     TRUE 0.810 50.000 0.034 NA   NA
 5759629 5759630 SPCG_0301 SPCG_0302   sulA FALSE 0.131 94.000 0.000 NA   NA
 5759630 5759631 SPCG_0302 SPCG_0303 sulA sulB TRUE 0.987 2.000 0.006 0.005 Y NA
 5759631 5759632 SPCG_0303 SPCG_0304 sulB folE TRUE 0.982 -19.000 0.024 1.000 Y NA
 5759632 5759633 SPCG_0304 SPCG_0305 folE sulD TRUE 0.901 43.000 0.005 1.000 Y NA
 5759634 5759635 SPCG_0306 SPCG_0307     TRUE 0.876 -10.000 0.000 NA   NA
 5759636 5759637 SPCG_0308 SPCG_0309 rplM rpsI TRUE 0.995 20.000 0.601 0.024 Y NA
 5759637 5759638 SPCG_0309 SPCG_0310 rpsI   FALSE 0.011 468.000 0.000 1.000   NA
 5759638 5759639 SPCG_0310 SPCG_0311     FALSE 0.241 76.000 0.000 1.000   NA
 5759639 5759640 SPCG_0311 SPCG_0312   bglA FALSE 0.084 148.000 0.000 1.000   NA
 5759640 5759641 SPCG_0312 SPCG_0313 bglA   TRUE 0.831 52.000 0.066 NA   NA
 5759641 5759642 SPCG_0313 SPCG_0314     FALSE 0.337 103.000 0.033 NA   NA
 5759642 5759643 SPCG_0314 SPCG_0315     TRUE 0.576 118.000 0.128 0.024 N NA
 5759643 5759644 SPCG_0315 SPCG_0316     TRUE 0.962 10.000 0.043 0.024 N NA
 5759644 5759645 SPCG_0316 SPCG_0317     TRUE 0.932 31.000 0.105 NA   NA
 5759645 5759646 SPCG_0317 SPCG_0318     TRUE 0.851 80.000 0.842 NA   NA
 5759646 5759647 SPCG_0318 SPCG_0319     FALSE 0.013 381.000 0.000 NA   NA
 5759647 5759648 SPCG_0319 SPCG_0320     FALSE 0.012 402.000 0.000 NA   NA
 5759651 5759652 SPCG_0323 SPCG_0324 kdgA   TRUE 0.984 10.000 0.167 1.000 Y NA
 5759652 5759653 SPCG_0324 SPCG_0325     TRUE 0.969 31.000 0.094 1.000 Y NA
 5759653 5759654 SPCG_0325 SPCG_0326   gno TRUE 0.965 19.000 0.197 1.000 N NA
 5759655 5759656 SPCG_0327 SPCG_0328     TRUE 0.964 12.000 0.160 1.000   NA
 5759656 5759657 SPCG_0328 SPCG_0329     TRUE 0.974 11.000 0.267 1.000   NA
 5759657 5759658 SPCG_0329 SPCG_0330     TRUE 0.997 15.000 0.933 0.033 Y NA
 5759658 5759659 SPCG_0330 SPCG_0331     TRUE 0.998 -13.000 0.933 0.033 Y NA
 5759659 5759660 SPCG_0331 SPCG_0332     TRUE 0.925 0.000 0.002 NA N NA
 5759660 5759661 SPCG_0332 SPCG_0333     TRUE 0.865 22.000 0.006 NA   NA
 5759661 5759662 SPCG_0333 SPCG_0334   regR TRUE 0.993 -6.000 0.562 NA   NA
 5759663 5759664 SPCG_0335 SPCG_0336   yorfE TRUE 0.767 16.000 0.000 NA   NA
 5759665 5759666 SPCG_0337 SPCG_0338 mraW ftsL TRUE 0.945 12.000 0.077 1.000 N NA
 5759666 5759667 SPCG_0338 SPCG_0339 ftsL pbp2X TRUE 0.985 4.000 0.456 1.000 N NA
 5759667 5759668 SPCG_0339 SPCG_0340 pbp2X mraY TRUE 0.984 2.000 0.038 1.000 Y NA
 5759668 5759669 SPCG_0340 SPCG_0341 mraY   FALSE 0.078 140.000 0.000 NA   NA
 5759669 5759670 SPCG_0341 SPCG_0342   clpL FALSE 0.021 281.000 0.000 NA   NA
 5759671 5759672 SPCG_0343 SPCG_0344 luxS   FALSE 0.259 95.000 0.006 NA   NA
 5759673 5759674 SPCG_0345 SPCG_0346 dexB wzg FALSE 0.006 1060.000 0.000 1.000 N NA
 5759674 5759675 SPCG_0346 SPCG_0347 wzg wzh TRUE 0.991 2.000 0.583 1.000 N NA
 5759675 5759676 SPCG_0347 SPCG_0348 wzh wzd TRUE 0.993 9.000 0.636 1.000 Y NA
 5759676 5759677 SPCG_0348 SPCG_0349 wzd wze TRUE 0.987 10.000 0.800 1.000 N NA
 5759677 5759678 SPCG_0349 SPCG_0350 wze wchA TRUE 0.943 16.000 0.067 NA N NA
 5759678 5759679 SPCG_0350 SPCG_0351 wchA wchJ TRUE 0.937 4.000 0.020 NA   NA
 5759679 5759680 SPCG_0351 SPCG_0352 wchJ wchK TRUE 0.970 0.000 0.048 NA   NA
 5759680 5759681 SPCG_0352 SPCG_0353 wchK wzy TRUE 0.876 -10.000 0.000 NA   NA
 5759681 5759682 SPCG_0353 SPCG_0354 wzy wchL TRUE 0.888 -3.000 0.000 NA   NA
 5759682 5759683 SPCG_0354 SPCG_0355 wchL wchM TRUE 0.960 -30.000 0.062 NA   NA
 5759683 5759684 SPCG_0355 SPCG_0356 wchM wchN TRUE 0.829 68.000 0.333 NA   NA
 5759684 5759685 SPCG_0356 SPCG_0357 wchN wzx TRUE 0.977 -16.000 0.118 NA   NA
 5759685 5759686 SPCG_0357 SPCG_0358 wzx   FALSE 0.070 152.000 0.000 NA   NA
 5759686 5759687 SPCG_0358 SPCG_0359     TRUE 0.767 17.000 0.000 NA   NA
 5759687 5759688 SPCG_0359 SPCG_0360   lrp FALSE 0.016 360.000 0.000 1.000   NA
 5759689 5759690 SPCG_0361 SPCG_0362     FALSE 0.021 281.000 0.000 NA   NA
 5759691 5759692 SPCG_0363 SPCG_0364 aliA   FALSE 0.021 301.000 0.000 1.000   NA
 5759693 5759694 SPCG_0365 SPCG_0366 pbp1A   TRUE 0.990 -3.000 0.319 1.000   NA
 5759695 5759696 SPCG_0367 SPCG_0368     TRUE 0.932 58.000 0.579 NA   NA
 5759696 5759697 SPCG_0368 SPCG_0369     FALSE 0.009 471.000 0.000 NA   NA
 5759697 5759698 SPCG_0369 SPCG_0370     TRUE 0.921 13.000 0.029 NA   NA
 5759698 5759699 SPCG_0370 SPCG_0371   gnd TRUE 0.643 55.000 0.005 NA   NA
 5759699 5759700 SPCG_0371 SPCG_0372 gnd csrR TRUE 0.896 12.000 0.012 1.000 N NA
 5759700 5759701 SPCG_0372 SPCG_0373 csrR cbpJ TRUE 0.767 9.000 0.000 NA   NA
 5759702 5759703 SPCG_0374 SPCG_0375     FALSE 0.084 135.000 0.000 NA   NA
 5759704 5759705 SPCG_0376 SPCG_0377 mvk mvd1 TRUE 0.997 -18.000 0.281 0.005 Y NA
 5759705 5759706 SPCG_0377 SPCG_0378 mvd1 mvaK2 TRUE 0.997 -13.000 0.312 0.005 Y NA
 5759706 5759707 SPCG_0378 SPCG_0379 mvaK2 fni TRUE 0.974 -16.000 0.097 1.000 N NA
 5759707 5759708 SPCG_0379 SPCG_0380 fni   TRUE 0.373 77.000 0.005 NA   NA
 5759708 5759709 SPCG_0380 SPCG_0381     TRUE 0.994 -3.000 0.679 NA   NA
 5759709 5759710 SPCG_0381 SPCG_0382     TRUE 0.997 14.000 0.853 0.012 Y NA
 5759710 5759711 SPCG_0382 SPCG_0383     TRUE 0.861 1.000 0.000 NA   NA
 5759711 5759712 SPCG_0383 SPCG_0384     TRUE 0.855 -18.000 0.000 NA   NA
 5759712 5759713 SPCG_0384 SPCG_0385     TRUE 0.916 19.000 0.024 NA   NA
 5759713 5759714 SPCG_0385 SPCG_0386     FALSE 0.071 150.000 0.000 NA   NA
 5759714 5759715 SPCG_0386 SPCG_0387   cbpG TRUE 0.888 -3.000 0.000 NA   NA
 5759715 5759716 SPCG_0387 SPCG_0388 cbpG   TRUE 0.751 19.000 0.000 NA   NA
 5759716 5759717 SPCG_0388 SPCG_0389     FALSE 0.098 118.000 0.000 NA   NA
 5759718 5759719 SPCG_0390 SPCG_0391     TRUE 0.801 -52.000 0.000 1.000   NA
 5759719 5759720 SPCG_0391 SPCG_0392     FALSE 0.355 62.000 0.000 NA   NA
 5759720 5759721 SPCG_0392 SPCG_0393     FALSE 0.033 226.000 0.000 NA   NA
 5759722 5759723 SPCG_0394 SPCG_0395 mtlA   TRUE 0.982 24.000 0.336 0.024 N NA
 5759723 5759724 SPCG_0395 SPCG_0396   mtlF TRUE 0.986 2.000 0.131 0.024 N NA
 5759724 5759725 SPCG_0396 SPCG_0397 mtlF mtlD TRUE 0.877 62.000 0.062 1.000 Y NA
 5759725 5759726 SPCG_0397 SPCG_0398 mtlD   FALSE 0.036 216.000 0.000 NA   NA
 5759726 5759727 SPCG_0398 SPCG_0399   tig FALSE 0.009 470.000 0.000 NA   NA
 5759728 5759729 SPCG_0400 SPCG_0401 recD spi FALSE 0.169 234.000 0.099 1.000 N NA
 5759729 5759730 SPCG_0401 SPCG_0402 spi   TRUE 0.946 12.000 0.080 1.000 N NA
 5759731 5759732 SPCG_0403 SPCG_0404     TRUE 0.964 -3.000 0.019 NA   NA
 5759732 5759733 SPCG_0404 SPCG_0405   mutS2 TRUE 0.422 104.000 0.070 1.000   NA
 5759735 5759736 SPCG_0407 SPCG_0408 dagA mip FALSE 0.036 218.000 0.000 NA   NA
 5759736 5759737 SPCG_0408 SPCG_0409 mip shetA FALSE 0.119 98.000 0.000 NA   NA
 5759738 5759739 SPCG_0410 SPCG_0411 serS   FALSE 0.161 130.000 0.003 NA   NA
 5759739 5759740 SPCG_0411 SPCG_0412   lysC TRUE 0.932 3.000 0.010 NA   NA
 5759741 5759742 SPCG_0413 SPCG_0414 phaB   TRUE 0.424 110.000 0.098 1.000 N NA
 5759742 5759743 SPCG_0414 SPCG_0415   fabH TRUE 0.975 0.000 0.070 1.000 N NA
 5759743 5759744 SPCG_0415 SPCG_0416 fabH acp TRUE 0.875 60.000 0.065 0.008   NA
 5759744 5759745 SPCG_0416 SPCG_0417 acp fabK TRUE 0.531 119.000 0.216 1.000   NA
 5759745 5759746 SPCG_0417 SPCG_0418 fabK fabD TRUE 0.981 -7.000 0.099 1.000   NA
 5759746 5759747 SPCG_0418 SPCG_0419 fabD fabG TRUE 0.991 34.000 0.432 0.008 Y NA
 5759747 5759748 SPCG_0419 SPCG_0420 fabG fabF TRUE 0.974 13.000 0.056 1.000 Y NA
 5759748 5759749 SPCG_0420 SPCG_0421 fabF accB TRUE 0.986 3.000 0.074 1.000 Y NA
 5759749 5759750 SPCG_0421 SPCG_0422 accB fabZ TRUE 0.994 -3.000 0.047 0.008 Y NA
 5759750 5759751 SPCG_0422 SPCG_0423 fabZ accC TRUE 0.973 12.000 0.045 1.000 Y NA
 5759751 5759752 SPCG_0423 SPCG_0424 accC accD TRUE 0.962 37.000 0.090 1.000 Y NA
 5759752 5759753 SPCG_0424 SPCG_0425 accD accA TRUE 0.997 -3.000 0.234 0.002 Y NA
 5759753 5759754 SPCG_0425 SPCG_0426 accA   FALSE 0.086 197.000 0.003 NA   NA
 5759755 5759756 SPCG_0427 SPCG_0428 nusB   TRUE 0.982 -25.000 0.265 NA   NA
 5759756 5759757 SPCG_0428 SPCG_0429   efp TRUE 0.916 22.000 0.031 NA   NA
 5759757 5759758 SPCG_0429 SPCG_0430 efp gatB FALSE 0.276 129.000 0.000 1.000 Y NA
 5759758 5759759 SPCG_0430 SPCG_0431 gatB gatA TRUE 0.998 0.000 0.492 0.002 Y NA
 5759759 5759760 SPCG_0431 SPCG_0432 gatA gatC TRUE 0.998 0.000 0.643 0.002 Y NA
 5759761 5759762 SPCG_0433 SPCG_0434 prfC   FALSE 0.030 255.000 0.000 1.000   NA
 5759762 5759763 SPCG_0434 SPCG_0435     FALSE 0.269 111.000 0.000 0.006   NA
 5759763 5759764 SPCG_0435 SPCG_0436   rpmB FALSE 0.113 116.000 0.000 1.000   NA
 5759764 5759765 SPCG_0436 SPCG_0437 rpmB asp23 FALSE 0.242 157.000 0.044 NA   NA
 5759765 5759766 SPCG_0437 SPCG_0438 asp23   TRUE 0.989 3.000 0.567 NA   NA
 5759766 5759767 SPCG_0438 SPCG_0439   ilvB FALSE 0.095 201.000 0.004 1.000   NA
 5759767 5759768 SPCG_0439 SPCG_0440 ilvB ilvN TRUE 0.995 -31.000 0.249 0.001 Y NA
 5759768 5759769 SPCG_0440 SPCG_0441 ilvN ilvC TRUE 0.935 66.000 0.130 0.003 Y NA
 5759769 5759770 SPCG_0441 SPCG_0442 ilvC   FALSE 0.205 77.000 0.000 NA   NA
 5759770 5759771 SPCG_0442 SPCG_0443     FALSE 0.031 238.000 0.000 NA   NA
 5759771 5759772 SPCG_0443 SPCG_0444   ilvA TRUE 0.511 50.000 0.000 NA   NA
 5759772 5759773 SPCG_0444 SPCG_0445 ilvA   FALSE 0.077 142.000 0.000 NA   NA
 5759773 5759774 SPCG_0445 SPCG_0446     FALSE 0.008 554.000 0.000 NA   NA
 5759775 5759776 SPCG_0447 SPCG_0448 glnQ glnH TRUE 0.997 0.000 0.758 1.000 Y NA
 5759778 5759779 SPCG_0450 SPCG_0451     FALSE 0.038 212.000 0.000 NA   NA
 5759781 5759782 SPCG_0453 SPCG_0454     TRUE 0.958 -3.000 0.000 0.017   NA
 5759782 5759783 SPCG_0454 SPCG_0455   dinP FALSE 0.035 237.000 0.000 1.000   NA
 5759785 5759786 SPCG_0457 SPCG_0458     FALSE 0.044 198.000 0.000 NA   NA
 5759788 5759789 SPCG_0460 SPCG_0461 trkH trkA TRUE 0.987 4.000 0.017 0.004 Y NA
 5759790 5759791 SPCG_0462 SPCG_0463     TRUE 0.945 15.000 0.068 NA   NA
 5759791 5759792 SPCG_0463 SPCG_0464     TRUE 0.775 7.000 0.000 NA   NA
 5759792 5759793 SPCG_0464 SPCG_0465     FALSE 0.113 102.000 0.000 NA   NA
 5759793 5759794 SPCG_0465 SPCG_0466     TRUE 0.992 -15.000 0.530 1.000   NA
 5759794 5759795 SPCG_0466 SPCG_0467   cspR FALSE 0.141 154.000 0.005 1.000 N NA
 5759795 5759796 SPCG_0467 SPCG_0468 cspR   FALSE 0.011 438.000 0.000 NA   NA
 5759796 5759797 SPCG_0468 SPCG_0469     TRUE 0.993 -10.000 0.600 NA   NA
 5759797 5759798 SPCG_0469 SPCG_0470     TRUE 0.942 28.000 0.105 1.000   NA
 5759798 5759799 SPCG_0470 SPCG_0471     TRUE 0.815 5.000 0.000 1.000   NA
 5759799 5759800 SPCG_0471 SPCG_0472   rpoE FALSE 0.103 113.000 0.000 1.000 N NA
 5759800 5759801 SPCG_0472 SPCG_0473 rpoE pyrG FALSE 0.046 390.000 0.029 1.000 N NA
 5759803 5759804 SPCG_0475 SPCG_0476     TRUE 0.851 -19.000 0.000 NA   NA
 5759804 5759805 SPCG_0476 SPCG_0477   pgk TRUE 0.486 90.000 0.002 1.000 Y NA
 5759805 5759806 SPCG_0477 SPCG_0478 pgk   FALSE 0.141 136.000 0.002 NA   NA
 5759806 5759807 SPCG_0478 SPCG_0479   glnR TRUE 0.675 77.000 0.154 NA   NA
 5759807 5759808 SPCG_0479 SPCG_0480 glnR glnA TRUE 0.937 37.000 0.179 1.000 N NA
 5759808 5759809 SPCG_0480 SPCG_0481 glnA   FALSE 0.009 473.000 0.000 NA   NA
 5759809 5759810 SPCG_0481 SPCG_0482   hsdS FALSE 0.058 171.000 0.000 NA   NA
 5759811 5759812 SPCG_0483 SPCG_0484 hsdS hsdM TRUE 0.990 0.000 0.023 0.086 Y NA
 5759812 5759813 SPCG_0484 SPCG_0485 hsdM hsdR TRUE 0.995 13.000 0.564 0.086 Y NA
 5759813 5759814 SPCG_0485 SPCG_0486 hsdR   FALSE 0.014 350.000 0.000 NA   NA
 5759815 5759816 SPCG_0487 SPCG_0488   hrcA FALSE 0.163 131.000 0.003 NA   NA
 5759816 5759817 SPCG_0488 SPCG_0489 hrcA grpE TRUE 0.960 3.000 0.051 1.000 N NA
 5759817 5759818 SPCG_0489 SPCG_0490 grpE dnaK FALSE 0.146 480.000 0.026 0.006 Y NA
 5759818 5759819 SPCG_0490 SPCG_0491 dnaK   FALSE 0.181 1145.000 0.196 0.003 Y NA
 5759820 5759821 SPCG_0492 SPCG_0493     TRUE 0.943 10.000 0.063 NA   NA
 5759822 5759823 SPCG_0494 SPCG_0495     TRUE 0.984 -3.000 0.167 NA N NA
 5759825 5759826 SPCG_0497 SPCG_0498 blpS   TRUE 0.985 5.000 0.500 NA   NA
 5759826 5759827 SPCG_0498 SPCG_0499     TRUE 0.990 14.000 0.444 NA Y NA
 5759828 5759829 SPCG_0500 SPCG_0501     TRUE 0.986 11.000 0.375 0.063   NA
 5759830 5759831 SPCG_0502 SPCG_0503 blpU blpL FALSE 0.008 580.000 0.000 NA   NA
 5759831 5759832 SPCG_0503 SPCG_0504 blpL   FALSE 0.044 198.000 0.000 NA   NA
 5759832 5759833 SPCG_0504 SPCG_0505     FALSE 0.032 228.000 0.000 NA   NA
 5759833 5759834 SPCG_0505 SPCG_0506   blpM FALSE 0.042 202.000 0.000 NA   NA
 5759834 5759835 SPCG_0506 SPCG_0507 blpM blpN TRUE 0.979 16.000 0.400 NA   NA
 5759835 5759836 SPCG_0507 SPCG_0508 blpN blpO FALSE 0.032 232.000 0.000 NA   NA
 5759836 5759837 SPCG_0508 SPCG_0509 blpO blpX FALSE 0.006 994.000 0.000 NA   NA
 5759837 5759838 SPCG_0509 SPCG_0510 blpX blpY TRUE 0.479 52.000 0.000 NA   NA
 5759838 5759839 SPCG_0510 SPCG_0511 blpY blpZ TRUE 0.592 42.000 0.000 NA   NA
 5759839 5759840 SPCG_0511 SPCG_0512 blpZ   FALSE 0.071 151.000 0.000 NA   NA
 5759840 5759841 SPCG_0512 SPCG_0513     FALSE 0.063 161.000 0.000 NA   NA
 5759841 5759842 SPCG_0513 SPCG_0514     TRUE 0.985 -3.000 0.154 NA   NA
 5759842 5759843 SPCG_0514 SPCG_0515     TRUE 0.639 55.000 0.004 NA   NA
 5759843 5759844 SPCG_0515 SPCG_0516   nusA TRUE 0.967 44.000 0.759 NA   NA
 5759844 5759845 SPCG_0516 SPCG_0517 nusA   TRUE 0.986 22.000 0.323 NA Y NA
 5759845 5759846 SPCG_0517 SPCG_0518     TRUE 0.990 -7.000 0.408 NA N NA
 5759846 5759847 SPCG_0518 SPCG_0519   infB TRUE 0.986 17.000 0.223 NA Y NA
 5759847 5759848 SPCG_0519 SPCG_0520 infB rbfA TRUE 0.581 224.000 0.530 1.000 Y NA
 5759848 5759849 SPCG_0520 SPCG_0521 rbfA   FALSE 0.029 243.000 0.000 NA   NA
 5759851 5759852 SPCG_0523 SPCG_0524     TRUE 0.986 0.000 0.229 NA   NA
 5759852 5759853 SPCG_0524 SPCG_0525     TRUE 0.956 10.000 0.114 NA   NA
 5759853 5759854 SPCG_0525 SPCG_0526     TRUE 0.515 96.000 0.143 NA   NA
 5759854 5759855 SPCG_0526 SPCG_0527     FALSE 0.015 373.000 0.000 1.000   NA
 5759855 5759856 SPCG_0527 SPCG_0528     TRUE 0.747 -166.000 0.000 NA   NA
 5759856 5759857 SPCG_0528 SPCG_0529     TRUE 0.746 -363.000 0.000 NA   NA
 5759857 5759858 SPCG_0529 SPCG_0530     TRUE 0.968 -15.000 0.053 NA   NA
 5759858 5759859 SPCG_0530 SPCG_0531   valS TRUE 0.952 -7.000 0.008 NA   NA
 5759859 5759860 SPCG_0531 SPCG_0532 valS   FALSE 0.199 81.000 0.000 1.000   NA
 5759862 5759863 SPCG_0534 SPCG_0535     FALSE 0.013 380.000 0.000 NA   NA
 5759864 5759865 SPCG_0536 SPCG_0537     FALSE 0.009 477.000 0.000 NA   NA
 5759866 5759867 SPCG_0538 SPCG_0539     TRUE 0.477 96.000 0.105 NA   NA
 5759867 5759868 SPCG_0539 SPCG_0540     TRUE 0.969 25.000 0.333 NA   NA
 5759868 5759869 SPCG_0540 SPCG_0541     TRUE 0.719 24.000 0.000 NA   NA
 5759869 5759870 SPCG_0541 SPCG_0542   licT FALSE 0.018 300.000 0.000 NA   NA
 5759870 5759871 SPCG_0542 SPCG_0543 licT   TRUE 0.974 18.000 0.259 1.000   NA
 5759871 5759872 SPCG_0543 SPCG_0544     TRUE 0.988 13.000 0.318 1.000 Y NA
 5759872 5759873 SPCG_0544 SPCG_0545   pheS FALSE 0.009 510.000 0.000 1.000 N NA
 5759873 5759874 SPCG_0545 SPCG_0546 pheS   TRUE 0.953 0.000 0.009 1.000   NA
 5759874 5759875 SPCG_0546 SPCG_0547   pheT TRUE 0.416 77.000 0.007 1.000   NA
 5759877 5759878 SPCG_0549 SPCG_0550     FALSE 0.190 79.000 0.000 NA   NA
 5759878 5759879 SPCG_0550 SPCG_0551   metE FALSE 0.199 81.000 0.000 1.000   NA
 5759879 5759880 SPCG_0551 SPCG_0552 metE metF TRUE 0.920 64.000 0.050 0.002 Y NA
 5759880 5759881 SPCG_0552 SPCG_0553 metF pnpA FALSE 0.008 571.000 0.000 1.000 N NA
 5759881 5759882 SPCG_0553 SPCG_0554 pnpA cysE TRUE 0.885 16.000 0.006 1.000 N NA
 5759882 5759883 SPCG_0554 SPCG_0555 cysE   TRUE 0.915 12.000 0.017 1.000   NA
 5759883 5759884 SPCG_0555 SPCG_0556   cysS FALSE 0.263 87.000 0.002 1.000   NA
 5759884 5759885 SPCG_0556 SPCG_0557 cysS   TRUE 0.983 -7.000 0.129 1.000   NA
 5759885 5759886 SPCG_0557 SPCG_0558     TRUE 0.934 4.000 0.017 NA   NA
 5759886 5759887 SPCG_0558 SPCG_0559     FALSE 0.010 464.000 0.000 NA   NA
 5759887 5759888 SPCG_0559 SPCG_0560     FALSE 0.007 671.000 0.000 NA   NA
 5759888 5759889 SPCG_0560 SPCG_0561     TRUE 0.995 13.000 0.917 1.000 Y NA
 5759889 5759890 SPCG_0561 SPCG_0562     TRUE 0.974 52.000 0.542 1.000 Y NA
 5759890 5759891 SPCG_0562 SPCG_0563   pep27 FALSE 0.058 171.000 0.000 NA   NA
 5759891 5759892 SPCG_0563 SPCG_0564 pep27 vncR TRUE 0.523 49.000 0.000 NA   NA
 5759892 5759893 SPCG_0564 SPCG_0565 vncR vncS TRUE 0.998 -3.000 1.000 1.000 Y NA
 5759893 5759894 SPCG_0565 SPCG_0566 vncS fba FALSE 0.079 141.000 0.000 1.000 N NA
 5759895 5759896 SPCG_0567 SPCG_0568     FALSE 0.043 283.000 0.000 0.057 N NA
 5759896 5759897 SPCG_0568 SPCG_0569     TRUE 0.997 10.000 0.947 0.011 Y NA
 5759897 5759898 SPCG_0569 SPCG_0570     TRUE 0.993 13.000 0.400 0.044 Y NA
 5759898 5759899 SPCG_0570 SPCG_0571     TRUE 0.985 -76.000 0.185 1.000 Y NA
 5759900 5759901 SPCG_0572 SPCG_0573 recJ   FALSE 0.063 175.000 0.000 1.000   NA
 5759901 5759902 SPCG_0573 SPCG_0574   estA TRUE 0.733 69.000 0.143 NA   NA
 5759902 5759903 SPCG_0574 SPCG_0575 estA murM TRUE 0.420 113.000 0.100 NA   NA
 5759903 5759904 SPCG_0575 SPCG_0576 murM murN TRUE 0.996 5.000 0.467 0.008 Y NA
 5759904 5759905 SPCG_0576 SPCG_0577 murN   TRUE 0.811 58.000 0.087 1.000 N NA
 5759905 5759906 SPCG_0577 SPCG_0578   uvrC TRUE 0.746 40.000 0.002 1.000 N NA
 5759906 5759907 SPCG_0578 SPCG_0579 uvrC   TRUE 0.511 50.000 0.000 NA   NA
 5759907 5759908 SPCG_0579 SPCG_0580     TRUE 0.861 1.000 0.000 NA   NA
 5759910 5759911 SPCG_0582 SPCG_0583   nrd TRUE 0.867 -13.000 0.000 NA   NA
 5759911 5759912 SPCG_0583 SPCG_0584 nrd pepV TRUE 0.935 13.000 0.051 1.000 N NA
 5759912 5759913 SPCG_0584 SPCG_0585 pepV   TRUE 0.757 54.000 0.031 NA N NA
 5759913 5759914 SPCG_0585 SPCG_0586     FALSE 0.094 124.000 0.000 NA   NA
 5759914 5759915 SPCG_0586 SPCG_0587   brnQ FALSE 0.019 291.000 0.000 NA   NA
 5759915 5759916 SPCG_0587 SPCG_0588 brnQ   FALSE 0.042 204.000 0.000 1.000 N NA
 5759916 5759917 SPCG_0588 SPCG_0589     TRUE 0.969 -31.000 0.007 1.000 Y NA
 5759917 5759918 SPCG_0589 SPCG_0590     TRUE 0.926 3.000 0.007 1.000 N NA
 5759918 5759919 SPCG_0590 SPCG_0591   rplK FALSE 0.018 309.000 0.000 1.000 N NA
 5759919 5759920 SPCG_0591 SPCG_0592 rplK rplA TRUE 0.789 208.000 0.838 0.031 Y NA
 5759920 5759921 SPCG_0592 SPCG_0593 rplA   FALSE 0.008 602.000 0.000 1.000   NA
 5759921 5759922 SPCG_0593 SPCG_0594     FALSE 0.006 1045.000 0.000 1.000   NA
 5759922 5759923 SPCG_0594 SPCG_0595     TRUE 0.961 -40.000 0.098 NA   NA
 5759923 5759924 SPCG_0595 SPCG_0596     TRUE 0.970 2.000 0.083 NA   NA
 5759924 5759925 SPCG_0596 SPCG_0597     FALSE 0.119 98.000 0.000 NA   NA
 5759925 5759926 SPCG_0597 SPCG_0598     TRUE 0.765 -63.000 0.000 NA   NA
 5759926 5759927 SPCG_0598 SPCG_0599   prtA FALSE 0.007 724.000 0.000 1.000   NA
 5759927 5759928 SPCG_0599 SPCG_0600 prtA   FALSE 0.008 611.000 0.000 1.000   NA
 5759928 5759929 SPCG_0600 SPCG_0601     TRUE 0.924 38.000 0.000 0.021 Y NA
 5759929 5759930 SPCG_0601 SPCG_0602     TRUE 0.887 48.000 0.000 0.031 Y NA
 5759930 5759931 SPCG_0602 SPCG_0603   bgaA FALSE 0.054 350.000 0.000 1.000 Y NA
 5759932 5759933 SPCG_0604 SPCG_0605     TRUE 0.871 -12.000 0.000 NA   NA
 5759933 5759934 SPCG_0605 SPCG_0606     FALSE 0.038 211.000 0.000 NA   NA
 5759935 5759936 SPCG_0607 SPCG_0608     TRUE 0.958 1.000 0.025 NA   NA
 5759936 5759937 SPCG_0608 SPCG_0609     TRUE 0.962 -22.000 0.042 1.000   NA
 5759937 5759938 SPCG_0609 SPCG_0610     TRUE 0.942 24.000 0.100 NA   NA
 5759938 5759939 SPCG_0610 SPCG_0611     TRUE 0.834 -25.000 0.000 NA   NA
 5759939 5759940 SPCG_0611 SPCG_0612     TRUE 0.834 -25.000 0.000 NA   NA
 5759940 5759941 SPCG_0612 SPCG_0613     FALSE 0.245 164.000 0.044 1.000   NA
 5759941 5759942 SPCG_0613 SPCG_0614   ccdA FALSE 0.044 211.000 0.000 1.000   NA
 5759942 5759943 SPCG_0614 SPCG_0615 ccdA   TRUE 0.995 -7.000 0.250 1.000 Y NA
 5759943 5759944 SPCG_0615 SPCG_0616   msrA TRUE 0.995 11.000 0.875 1.000 Y NA
 5759944 5759945 SPCG_0616 SPCG_0617 msrA   FALSE 0.147 340.000 0.240 1.000   NA
 5759945 5759946 SPCG_0617 SPCG_0618     TRUE 0.996 -3.000 0.480 0.011   NA
 5759946 5759947 SPCG_0618 SPCG_0619     FALSE 0.332 95.000 0.020 NA   NA
 5759947 5759948 SPCG_0619 SPCG_0620   zmpB TRUE 0.731 22.000 0.000 NA   NA
 5759948 5759949 SPCG_0620 SPCG_0621 zmpB   TRUE 0.410 61.000 0.000 1.000   NA
 5759949 5759950 SPCG_0621 SPCG_0622     TRUE 0.936 1.000 0.006 NA   NA
 5759950 5759951 SPCG_0622 SPCG_0623     TRUE 0.614 59.000 0.006 NA   NA
 5759951 5759952 SPCG_0623 SPCG_0624   glcK FALSE 0.268 109.000 0.015 NA   NA
 5759952 5759953 SPCG_0624 SPCG_0625 glcK thyA FALSE 0.244 97.000 0.006 1.000 N NA
 5759955 5759956 SPCG_0627 SPCG_0628   miaA TRUE 0.782 6.000 0.000 NA   NA
 5759956 5759957 SPCG_0628 SPCG_0629 miaA   TRUE 0.969 -7.000 0.027 1.000   NA
 5759957 5759958 SPCG_0629 SPCG_0630     TRUE 0.958 -7.000 0.014 NA   NA
 5759958 5759959 SPCG_0630 SPCG_0631     TRUE 0.919 15.000 0.022 NA   NA
 5759959 5759960 SPCG_0631 SPCG_0632     TRUE 0.944 21.000 0.074 1.000   NA
 5759962 5759963 SPCG_0634 SPCG_0635     TRUE 0.967 0.000 0.035 NA   NA
 5759963 5759964 SPCG_0635 SPCG_0636     FALSE 0.097 119.000 0.000 NA   NA
 5759966 5759967 SPCG_0638 SPCG_0639     TRUE 0.899 20.000 0.015 NA   NA
 5759967 5759968 SPCG_0639 SPCG_0640     FALSE 0.008 547.000 0.000 NA   NA
 5759968 5759969 SPCG_0640 SPCG_0641     FALSE 0.246 71.000 0.000 NA   NA
 5759969 5759970 SPCG_0641 SPCG_0642     TRUE 0.994 2.000 1.000 NA   NA
 5759970 5759971 SPCG_0642 SPCG_0643   murD FALSE 0.112 104.000 0.000 1.000 N NA
 5759971 5759972 SPCG_0643 SPCG_0644 murD murG TRUE 0.986 2.000 0.060 1.000 Y NA
 5759972 5759973 SPCG_0644 SPCG_0645 murG divIB TRUE 0.976 10.000 0.072 NA Y NA
 5759973 5759974 SPCG_0645 SPCG_0646 divIB   FALSE 0.105 110.000 0.000 NA   NA
 5759974 5759975 SPCG_0646 SPCG_0647     TRUE 0.752 12.000 0.000 NA   NA
 5759975 5759976 SPCG_0647 SPCG_0648     FALSE 0.015 341.000 0.000 NA   NA
 5759976 5759977 SPCG_0648 SPCG_0649     FALSE 0.018 330.000 0.000 1.000   NA
 5759977 5759978 SPCG_0649 SPCG_0650     FALSE 0.011 440.000 0.000 1.000 N NA
 5759978 5759979 SPCG_0650 SPCG_0651     TRUE 0.992 -7.000 0.500 NA   NA
 5759981 5759982 SPCG_0653 SPCG_0654 pyrF pyrE TRUE 0.928 34.000 0.006 1.000 Y NA
 5759982 5759983 SPCG_0654 SPCG_0655 pyrE   FALSE 0.007 679.000 0.000 NA   NA
 5759983 5759984 SPCG_0655 SPCG_0656     FALSE 0.006 755.000 0.000 NA   NA
 5759984 5759985 SPCG_0656 SPCG_0657     TRUE 0.996 -3.000 1.000 NA   NA
 5759986 5759987 SPCG_0658 SPCG_0659     TRUE 0.993 12.000 0.671 1.000 Y NA
 5759987 5759988 SPCG_0659 SPCG_0660     TRUE 0.960 1.000 0.000 1.000 Y NA
 5759989 5759990 SPCG_0661 SPCG_0662   lysS FALSE 0.103 128.000 0.000 1.000   NA
 5759990 5759991 SPCG_0662 SPCG_0663 lysS lctO FALSE 0.007 624.000 0.000 1.000 N NA
 5759991 5759992 SPCG_0663 SPCG_0664 lctO   FALSE 0.007 557.000 0.000 NA N NA
 5759994 5759995 SPCG_0666 SPCG_0667 thiM thiE TRUE 0.993 2.000 0.061 0.005 Y NA
 5759995 5759996 SPCG_0667 SPCG_0668 thiE   FALSE 0.008 559.000 0.000 NA   NA
 5759996 5759997 SPCG_0668 SPCG_0669     TRUE 0.966 1.000 0.047 NA   NA
 5759997 5759998 SPCG_0669 SPCG_0670     TRUE 0.959 2.000 0.035 NA   NA
 5759998 5759999 SPCG_0670 SPCG_0671   tenA TRUE 0.936 11.000 0.050 NA   NA
 5759999 5760000 SPCG_0671 SPCG_0672 tenA   TRUE 0.948 5.000 0.052 NA   NA
 5760000 5760001 SPCG_0672 SPCG_0673   thiM TRUE 0.976 -3.000 0.059 NA   NA
 5760001 5760002 SPCG_0673 SPCG_0674 thiM thiE TRUE 0.997 -7.000 0.190 0.005 Y NA
 5760004 5760005 SPCG_0676 SPCG_0677 copY   TRUE 0.971 11.000 0.250 NA   NA
 5760005 5760006 SPCG_0677 SPCG_0678   ctpA TRUE 0.981 1.000 0.167 NA   NA
 5760006 5760007 SPCG_0678 SPCG_0679 ctpA spxB FALSE 0.041 207.000 0.000 1.000 N NA
 5760007 5760008 SPCG_0679 SPCG_0680 spxB   TRUE 0.403 111.000 0.083 NA   NA
 5760009 5760010 SPCG_0681 SPCG_0682     TRUE 0.691 29.000 0.000 NA   NA
 5760010 5760011 SPCG_0682 SPCG_0683     FALSE 0.016 337.000 0.000 NA   NA
 5760012 5760013 SPCG_0684 SPCG_0685     TRUE 0.397 78.000 0.000 0.028   NA
 5760013 5760014 SPCG_0685 SPCG_0686     TRUE 0.858 -16.000 0.000 NA   NA
 5760015 5760016 SPCG_0687 SPCG_0688     TRUE 0.888 -3.000 0.000 NA   NA
 5760018 5760019 SPCG_0690 SPCG_0691     TRUE 0.770 20.000 0.000 1.000   NA
 5760019 5760020 SPCG_0691 SPCG_0692     TRUE 0.815 41.000 0.012 NA   NA
 5760021 5760022 SPCG_0693 SPCG_0694     TRUE 0.754 19.000 0.000 1.000 N NA
 5760022 5760023 SPCG_0694 SPCG_0695     TRUE 0.811 68.000 0.041 1.000 Y NA
 5760023 5760024 SPCG_0695 SPCG_0696     FALSE 0.139 173.000 0.010 1.000 N NA
 5760026 5760027 SPCG_0698 SPCG_0699     TRUE 0.460 102.000 0.109 NA   NA
 5760027 5760028 SPCG_0699 SPCG_0700     FALSE 0.325 259.000 0.150 1.000 Y NA
 5760028 5760029 SPCG_0700 SPCG_0701     TRUE 0.995 4.000 0.363 0.043 Y NA
 5760029 5760030 SPCG_0701 SPCG_0702     TRUE 0.995 0.000 0.349 1.000 Y NA
 5760030 5760031 SPCG_0702 SPCG_0703     TRUE 0.995 0.000 0.128 0.036 Y NA
 5760031 5760032 SPCG_0703 SPCG_0704     FALSE 0.106 414.000 0.214 1.000   NA
 5760032 5760033 SPCG_0704 SPCG_0705   prfB FALSE 0.042 214.000 0.000 1.000   NA
 5760033 5760034 SPCG_0705 SPCG_0706 prfB ftsE TRUE 0.940 18.000 0.053 1.000 N NA
 5760034 5760035 SPCG_0706 SPCG_0707 ftsE ftsX TRUE 0.991 -70.000 0.431 1.000 Y NA
 5760035 5760036 SPCG_0707 SPCG_0708 ftsX ptsG FALSE 0.040 286.000 0.000 0.082 N NA
 5760036 5760037 SPCG_0708 SPCG_0709 ptsG   TRUE 0.782 6.000 0.000 NA   NA
 5760037 5760038 SPCG_0709 SPCG_0710     TRUE 0.883 -7.000 0.000 NA   NA
 5760038 5760039 SPCG_0710 SPCG_0711   rheB FALSE 0.078 140.000 0.000 NA   NA
 5760039 5760040 SPCG_0711 SPCG_0712 rheB metK FALSE 0.037 215.000 0.000 1.000 N NA
 5760040 5760041 SPCG_0712 SPCG_0713 metK   FALSE 0.008 553.000 0.000 1.000 N NA
 5760041 5760042 SPCG_0713 SPCG_0714   holA TRUE 0.783 34.000 0.002 1.000 N NA
 5760042 5760043 SPCG_0714 SPCG_0715 holA sodA FALSE 0.148 173.000 0.012 1.000 N NA
 5760043 5760044 SPCG_0715 SPCG_0716 sodA   FALSE 0.197 158.000 0.021 NA   NA
 5760044 5760045 SPCG_0716 SPCG_0717     TRUE 0.899 21.000 0.016 NA   NA
 5760045 5760046 SPCG_0717 SPCG_0718     TRUE 0.953 0.000 0.012 NA   NA
 5760046 5760047 SPCG_0718 SPCG_0719     TRUE 0.955 2.000 0.027 NA   NA
 5760048 5760049 SPCG_0720 SPCG_0721 ppiA   FALSE 0.164 84.000 0.000 NA   NA
 5760049 5760050 SPCG_0721 SPCG_0722     FALSE 0.009 479.000 0.000 NA   NA
 5760051 5760052 SPCG_0723 SPCG_0724 rpsP   TRUE 0.985 4.000 0.385 1.000   NA
 5760052 5760053 SPCG_0724 SPCG_0725     FALSE 0.008 565.000 0.000 NA   NA
 5760053 5760054 SPCG_0725 SPCG_0726   rimM TRUE 0.679 31.000 0.000 NA   NA
 5760054 5760055 SPCG_0726 SPCG_0727 rimM trmD TRUE 0.997 -10.000 0.672 1.000 Y NA
 5760055 5760056 SPCG_0727 SPCG_0728 trmD   TRUE 0.862 12.000 0.002 1.000   NA
 5760059 5760060 SPCG_0731 SPCG_0732     FALSE 0.091 127.000 0.000 NA   NA
 5760060 5760061 SPCG_0732 SPCG_0733   gor FALSE 0.057 173.000 0.000 NA   NA
 5760062 5760063 SPCG_0734 SPCG_0735     TRUE 0.994 -16.000 0.923 1.000 N NA
 5760063 5760064 SPCG_0735 SPCG_0736     TRUE 0.997 2.000 0.923 1.000 Y NA
 5760064 5760065 SPCG_0736 SPCG_0737   metG FALSE 0.306 82.000 0.003 1.000 N NA
 5760065 5760066 SPCG_0737 SPCG_0738 metG   FALSE 0.012 373.000 0.000 NA N NA
 5760066 5760067 SPCG_0738 SPCG_0739     TRUE 0.985 4.000 0.429 NA   NA
 5760067 5760068 SPCG_0739 SPCG_0740     FALSE 0.238 72.000 0.000 NA   NA
 5760068 5760069 SPCG_0740 SPCG_0741     TRUE 0.526 66.000 0.008 NA   NA
 5760069 5760070 SPCG_0741 SPCG_0742   fabG TRUE 0.994 -7.000 0.710 NA   NA
 5760070 5760071 SPCG_0742 SPCG_0743 fabG   TRUE 0.944 11.000 0.067 1.000 N NA
 5760071 5760072 SPCG_0743 SPCG_0744     TRUE 0.853 -25.000 0.000 1.000   NA
 5760072 5760073 SPCG_0744 SPCG_0745     TRUE 0.834 -25.000 0.000 NA   NA
 5760073 5760074 SPCG_0745 SPCG_0746   pepN FALSE 0.095 123.000 0.000 NA   NA
 5760074 5760075 SPCG_0746 SPCG_0747 pepN ciaR TRUE 0.875 43.000 0.061 1.000 N NA
 5760075 5760076 SPCG_0747 SPCG_0748 ciaR ciaH TRUE 0.997 -10.000 0.606 1.000 Y NA
 5760078 5760079 SPCG_0750 SPCG_0751   dinG FALSE 0.043 200.000 0.000 1.000 N NA
 5760079 5760080 SPCG_0751 SPCG_0752 dinG rodA TRUE 0.914 10.000 0.019 1.000 N NA
 5760080 5760081 SPCG_0752 SPCG_0753 rodA thiJ TRUE 0.889 11.000 0.008 NA   NA
 5760081 5760082 SPCG_0753 SPCG_0754 thiJ gph FALSE 0.216 76.000 0.000 NA   NA
 5760082 5760083 SPCG_0754 SPCG_0755 gph gyrB TRUE 0.911 15.000 0.013 1.000   NA
 5760083 5760084 SPCG_0755 SPCG_0756 gyrB ezrA TRUE 0.695 55.000 0.011 1.000 N NA
 5760084 5760085 SPCG_0756 SPCG_0757 ezrA   FALSE 0.008 531.000 0.000 NA   NA
 5760086 5760087 SPCG_0758 SPCG_0759     FALSE 0.013 368.000 0.000 NA   NA
 5760087 5760088 SPCG_0759 SPCG_0760     FALSE 0.306 165.000 0.114 NA   NA
 5760090 5760091 SPCG_0762 SPCG_0763 clpE   FALSE 0.032 229.000 0.000 NA   NA
 5760092 5760093 SPCG_0764 SPCG_0765     TRUE 0.997 0.000 0.640 1.000 Y NA
 5760093 5760094 SPCG_0765 SPCG_0766     FALSE 0.349 91.000 0.017 1.000 N NA
 5760094 5760095 SPCG_0766 SPCG_0767     FALSE 0.189 138.000 0.009 NA   NA
 5760095 5760096 SPCG_0767 SPCG_0768     TRUE 0.903 15.000 0.013 NA   NA
 5760098 5760099 SPCG_0770 SPCG_0771 rpiA deoB TRUE 0.970 -49.000 0.018 1.000 Y NA
 5760099 5760100 SPCG_0771 SPCG_0772 deoB   TRUE 0.975 2.000 0.120 NA   NA
 5760100 5760101 SPCG_0772 SPCG_0773     FALSE 0.101 115.000 0.000 NA   NA
 5760101 5760102 SPCG_0773 SPCG_0774   pnp TRUE 0.976 0.000 0.083 NA   NA
 5760102 5760103 SPCG_0774 SPCG_0775 pnp   FALSE 0.011 464.000 0.000 1.000   NA
 5760103 5760104 SPCG_0775 SPCG_0776     TRUE 0.785 10.000 0.000 1.000   NA
 5760104 5760105 SPCG_0776 SPCG_0777     TRUE 0.740 25.000 0.000 1.000   NA
 5760105 5760106 SPCG_0777 SPCG_0778   deoD FALSE 0.008 658.000 0.000 1.000   NA
 5760107 5760108 SPCG_0779 SPCG_0780 flaR rpsT TRUE 0.627 53.000 0.002 1.000 N NA
 5760108 5760109 SPCG_0780 SPCG_0781 rpsT coaA TRUE 0.727 53.000 0.014 1.000 N NA
 5760110 5760111 SPCG_0782 SPCG_0783     FALSE 0.040 207.000 0.000 NA   NA
 5760111 5760112 SPCG_0783 SPCG_0784   pdp TRUE 0.973 -3.000 0.044 1.000 N NA
 5760112 5760113 SPCG_0784 SPCG_0785 pdp deoC TRUE 0.981 18.000 0.106 1.000 Y NA
 5760113 5760114 SPCG_0785 SPCG_0786 deoC cdd TRUE 0.987 -13.000 0.051 1.000 Y NA
 5760114 5760115 SPCG_0786 SPCG_0787 cdd   TRUE 0.969 18.000 0.200 1.000   NA
 5760115 5760116 SPCG_0787 SPCG_0788     FALSE 0.247 144.000 0.024 1.000   NA
 5760116 5760117 SPCG_0788 SPCG_0789     TRUE 0.986 -34.000 0.438 1.000   NA
 5760117 5760118 SPCG_0789 SPCG_0790     TRUE 0.994 3.000 0.720 0.042   NA
 5760118 5760119 SPCG_0790 SPCG_0791     FALSE 0.158 85.000 0.000 NA   NA
 5760119 5760120 SPCG_0791 SPCG_0792     FALSE 0.083 136.000 0.000 NA   NA
 5760120 5760121 SPCG_0792 SPCG_0793     TRUE 0.875 0.000 0.000 NA   NA
 5760121 5760122 SPCG_0793 SPCG_0794     FALSE 0.355 62.000 0.000 NA   NA
 5760124 5760125 SPCG_0796 SPCG_0797 parE   TRUE 0.875 0.000 0.000 NA   NA
 5760125 5760126 SPCG_0797 SPCG_0798     TRUE 0.757 14.000 0.000 NA   NA
 5760126 5760127 SPCG_0798 SPCG_0799   parC FALSE 0.061 165.000 0.000 NA   NA
 5760127 5760128 SPCG_0799 SPCG_0800 parC ilvE TRUE 0.359 132.000 0.086 1.000 N NA
 5760128 5760129 SPCG_0800 SPCG_0801 ilvE   TRUE 0.437 56.000 0.000 NA   NA
 5760129 5760130 SPCG_0801 SPCG_0802     TRUE 0.558 44.000 0.000 NA   NA
 5760130 5760131 SPCG_0802 SPCG_0803     TRUE 0.996 -3.000 0.939 NA   NA
 5760131 5760132 SPCG_0803 SPCG_0804   pcp TRUE 0.974 15.000 0.300 NA   NA
 5760132 5760133 SPCG_0804 SPCG_0805 pcp   FALSE 0.060 168.000 0.000 NA   NA
 5760133 5760134 SPCG_0805 SPCG_t04     TRUE 0.511 50.000 0.000 NA   NA
 5760134 5760135 SPCG_t04 SPCG_t05     TRUE 0.760 10.000 0.000 NA   NA
 5760135 5760136 SPCG_t05 SPCG_0806   rpsA FALSE 0.063 162.000 0.000 NA   NA
 5760137 5760138 SPCG_0807 SPCG_0808     FALSE 0.021 281.000 0.000 NA   NA
 5760139 5760140 SPCG_0809 SPCG_0810   dnaX TRUE 0.962 0.000 0.030 NA N NA
 5760140 5760141 SPCG_0810 SPCG_0811 dnaX   TRUE 0.926 28.000 0.067 NA   NA
 5760141 5760142 SPCG_0811 SPCG_0812     FALSE 0.165 129.000 0.003 NA   NA
 5760142 5760143 SPCG_0812 SPCG_0813     TRUE 0.977 28.000 0.139 1.000 Y NA
 5760143 5760144 SPCG_0813 SPCG_0814     TRUE 0.988 -34.000 0.606 1.000 N NA
 5760144 5760145 SPCG_0814 SPCG_0815   nifU TRUE 0.978 -43.000 0.292 1.000 N NA
 5760145 5760146 SPCG_0815 SPCG_0816 nifU   TRUE 0.932 54.000 0.152 0.002 N NA
 5760149 5760150 SPCG_0819 SPCG_0820     FALSE 0.080 139.000 0.000 NA   NA
 5760150 5760151 SPCG_0820 SPCG_0821     TRUE 0.939 27.000 0.103 NA   NA
 5760151 5760152 SPCG_0821 SPCG_0822     TRUE 0.447 55.000 0.000 NA   NA
 5760155 5760156 SPCG_0824 SPCG_0825 fruR fruB TRUE 0.997 -3.000 0.721 1.000 Y NA
 5760156 5760157 SPCG_0825 SPCG_0826 fruB fruA TRUE 0.998 -3.000 0.816 1.000 Y NA
 5760157 5760158 SPCG_0826 SPCG_0827 fruA ftsK TRUE 0.464 86.000 0.010 0.054 N NA
 5760160 5760161 SPCG_0829 SPCG_0830   thiI TRUE 0.977 9.000 0.349 1.000 N NA
 5760161 5760162 SPCG_0830 SPCG_0831 thiI   FALSE 0.203 111.000 0.005 NA   NA
 5760162 5760163 SPCG_0831 SPCG_0832     TRUE 0.731 22.000 0.000 NA   NA
 5760163 5760164 SPCG_0832 SPCG_0833     TRUE 0.888 -3.000 0.000 NA   NA
 5760164 5760165 SPCG_0833 SPCG_0834     TRUE 0.956 13.000 0.130 NA   NA
 5760165 5760166 SPCG_0834 SPCG_0835     FALSE 0.009 508.000 0.000 1.000 N NA
 5760166 5760167 SPCG_0835 SPCG_0836     TRUE 0.968 13.000 0.092 0.079   NA
 5760167 5760168 SPCG_0836 SPCG_0837     TRUE 0.964 -3.000 0.000 0.003   NA
 5760168 5760169 SPCG_0837 SPCG_0838     TRUE 0.388 60.000 0.000 NA   NA
 5760169 5760170 SPCG_0838 SPCG_0839     TRUE 0.954 -3.000 0.009 NA   NA
 5760170 5760171 SPCG_0839 SPCG_0840     FALSE 0.111 118.000 0.000 1.000   NA
 5760171 5760172 SPCG_0840 SPCG_0841     TRUE 0.886 -55.000 0.000 0.079   NA
 5760172 5760173 SPCG_0841 SPCG_0842     TRUE 0.955 30.000 0.048 0.008   NA
 5760177 5760178 SPCG_0846 SPCG_0847     FALSE 0.135 93.000 0.000 NA   NA
 5760178 5760179 SPCG_0847 SPCG_0848     FALSE 0.012 398.000 0.000 NA   NA
 5760179 5760180 SPCG_0848 SPCG_0849     TRUE 0.943 5.000 0.040 1.000 N NA
 5760180 5760181 SPCG_0849 SPCG_0850     TRUE 0.987 25.000 1.000 1.000 N NA
 5760181 5760182 SPCG_0850 SPCG_0851     TRUE 0.962 28.000 0.037 1.000 Y NA
 5760182 5760183 SPCG_0851 SPCG_0852     TRUE 0.922 19.000 0.037 NA N NA
 5760183 5760184 SPCG_0852 SPCG_0853   nanC TRUE 0.953 2.000 0.000 NA Y NA
 5760184 5760185 SPCG_0853 SPCG_0854 nanC   TRUE 0.785 10.000 0.000 1.000   NA
 5760185 5760186 SPCG_0854 SPCG_0855     TRUE 0.597 157.000 0.667 NA   NA
 5760186 5760187 SPCG_0855 SPCG_0856     TRUE 0.969 25.000 0.333 NA   NA
 5760187 5760188 SPCG_0856 SPCG_0857     TRUE 0.965 -10.000 0.029 NA   NA
 5760188 5760189 SPCG_0857 SPCG_0858     TRUE 0.994 16.000 0.848 0.009   NA
 5760189 5760190 SPCG_0858 SPCG_0859     TRUE 0.947 34.000 0.045 0.009   NA
 5760190 5760191 SPCG_0859 SPCG_0860     TRUE 0.851 65.000 0.097 0.009   NA
 5760191 5760192 SPCG_0860 SPCG_0861     TRUE 0.992 -10.000 0.021 0.008 Y NA
 5760192 5760193 SPCG_0861 SPCG_0862     TRUE 0.965 39.000 0.021 0.008 Y NA
 5760193 5760194 SPCG_0862 SPCG_0863     TRUE 0.998 1.000 0.776 0.008 Y NA
 5760194 5760195 SPCG_0863 SPCG_0864     TRUE 0.991 23.000 0.238 0.008 Y NA
 5760196 5760197 SPCG_0865 SPCG_0866     FALSE 0.021 281.000 0.000 NA   NA
 5760198 5760199 SPCG_0867 SPCG_0868     TRUE 0.767 16.000 0.000 NA   NA
 5760200 5760201 SPCG_0869 SPCG_0870     TRUE 0.792 17.000 0.000 1.000   NA
 5760202 5760203 SPCG_0871 SPCG_0872   pfkA TRUE 0.562 83.000 0.098 1.000 N NA
 5760203 5760204 SPCG_0872 SPCG_0873 pfkA   TRUE 0.970 59.000 0.261 0.005 Y NA
 5760206 5760207 SPCG_0875 SPCG_0876     TRUE 0.751 13.000 0.000 NA   NA
 5760207 5760208 SPCG_0876 SPCG_0877     TRUE 0.750 -79.000 0.000 NA   NA
 5760210 5760211 SPCG_0879 SPCG_0880     TRUE 0.813 4.000 0.000 NA   NA
 5760212 5760213 SPCG_0881 SPCG_0882     TRUE 0.995 -3.000 0.841 NA   NA
 5760213 5760214 SPCG_0882 SPCG_0883     TRUE 0.974 1.000 0.091 NA   NA
 5760215 5760216 SPCG_0884 SPCG_0885     FALSE 0.146 84.000 0.000 NA N NA
 5760216 5760217 SPCG_0885 SPCG_0886     TRUE 0.985 -13.000 0.215 NA   NA
 5760217 5760218 SPCG_0886 SPCG_0887     TRUE 0.773 58.000 0.051 NA   NA
 5760220 5760221 SPCG_0889 SPCG_0890     TRUE 0.994 2.000 0.855 1.000   NA
 5760222 5760223 SPCG_0891 SPCG_0892     FALSE 0.183 80.000 0.000 NA   NA
 5760226 5760227 SPCG_0895 SPCG_0896 speE   TRUE 0.988 -3.000 0.036 1.000 Y NA
 5760227 5760228 SPCG_0896 SPCG_0897   nspC TRUE 0.996 0.000 0.444 1.000 Y NA
 5760228 5760229 SPCG_0897 SPCG_0898 nspC   TRUE 0.987 -3.000 0.025 1.000 Y NA
 5760229 5760230 SPCG_0898 SPCG_0899     TRUE 0.952 10.000 0.084 1.000   NA
 5760232 5760233 SPCG_0901 SPCG_0902   cpsY FALSE 0.029 242.000 0.000 NA   NA
 5760233 5760234 SPCG_0902 SPCG_0903 cpsY lspA TRUE 0.982 -3.000 0.119 1.000 N NA
 5760234 5760235 SPCG_0903 SPCG_0904 lspA rluD TRUE 0.976 -10.000 0.082 1.000 N NA
 5760235 5760236 SPCG_0904 SPCG_0905 rluD lytD TRUE 0.853 3.000 0.000 1.000   NA
 5760236 5760237 SPCG_0905 SPCG_0906 lytD proB FALSE 0.340 80.000 0.003 1.000   NA
 5760237 5760238 SPCG_0906 SPCG_0907 proB proA TRUE 0.994 10.000 0.281 0.002 Y NA
 5760238 5760239 SPCG_0907 SPCG_0908 proA proC TRUE 0.985 4.000 0.009 0.002 Y NA
 5760239 5760240 SPCG_0908 SPCG_0909 proC tmk FALSE 0.035 220.000 0.000 1.000 N NA
 5760240 5760241 SPCG_0909 SPCG_0910 tmk holB TRUE 0.989 -3.000 0.254 1.000 N NA
 5760241 5760242 SPCG_0910 SPCG_0911 holB   TRUE 0.928 13.000 0.038 NA   NA
 5760242 5760243 SPCG_0911 SPCG_0912     TRUE 0.957 3.000 0.043 NA   NA
 5760243 5760244 SPCG_0912 SPCG_0913     FALSE 0.043 200.000 0.000 NA   NA
 5760244 5760245 SPCG_0913 SPCG_0914     FALSE 0.027 253.000 0.000 NA   NA
 5760246 5760247 SPCG_0915 SPCG_0916     TRUE 0.767 17.000 0.000 NA   NA
 5760248 5760249 SPCG_0917 SPCG_0918 gidA pyrH FALSE 0.322 78.000 0.002 1.000 N NA
 5760249 5760250 SPCG_0918 SPCG_0919 pyrH frr TRUE 0.985 9.000 0.626 1.000 N NA
 5760250 5760251 SPCG_0919 SPCG_0920 frr   TRUE 0.888 21.000 0.012 NA   NA
 5760251 5760252 SPCG_0920 SPCG_0921     TRUE 0.906 9.000 0.013 NA   NA
 5760252 5760253 SPCG_0921 SPCG_0922   phoL FALSE 0.328 86.000 0.010 NA   NA
 5760253 5760254 SPCG_0922 SPCG_0923 phoL   TRUE 0.834 3.000 0.000 NA   NA
 5760254 5760255 SPCG_0923 SPCG_0924     TRUE 0.752 12.000 0.000 NA   NA
 5760255 5760256 SPCG_0924 SPCG_0925     FALSE 0.058 183.000 0.000 1.000   NA
 5760256 5760257 SPCG_0925 SPCG_0926     TRUE 0.964 3.000 0.065 NA   NA
 5760258 5760259 SPCG_0927 SPCG_0928     TRUE 0.966 -3.000 0.000 0.001   NA
 5760260 5760261 SPCG_0929 SPCG_0930   celA TRUE 0.732 68.000 0.125 1.000 N NA
 5760261 5760262 SPCG_0930 SPCG_0931 celA celB TRUE 0.928 -16.000 0.002 1.000   NA
 5760262 5760263 SPCG_0931 SPCG_0932 celB   FALSE 0.053 179.000 0.000 NA   NA
 5760263 5760264 SPCG_0932 SPCG_0933     TRUE 0.664 33.000 0.000 NA   NA
 5760264 5760265 SPCG_0933 SPCG_0934     TRUE 0.929 56.000 0.500 NA   NA
 5760265 5760266 SPCG_0934 SPCG_0935   infC FALSE 0.026 254.000 0.000 NA   NA
 5760266 5760267 SPCG_0935 SPCG_0936 infC rpmI TRUE 0.989 33.000 0.652 1.000 Y NA
 5760267 5760268 SPCG_0936 SPCG_0937 rpmI rplT TRUE 0.990 52.000 0.928 0.021 Y NA
 5760268 5760269 SPCG_0937 SPCG_0938 rplT lguL TRUE 0.878 7.000 0.003 1.000 N NA
 5760269 5760270 SPCG_0938 SPCG_0939 lguL pyrDII FALSE 0.028 250.000 0.000 1.000 N NA
 5760270 5760271 SPCG_0939 SPCG_0940 pyrDII pyrD TRUE 0.987 -43.000 0.592 1.000 N NA
 5760271 5760272 SPCG_0940 SPCG_0941 pyrD lytB TRUE 0.781 42.000 0.005 1.000   NA
 5760274 5760275 SPCG_0943 SPCG_0944   dgkA TRUE 0.959 -19.000 0.035 NA   NA
 5760275 5760276 SPCG_0944 SPCG_0945 dgkA era TRUE 0.949 17.000 0.063 1.000   NA
 5760276 5760277 SPCG_0945 SPCG_0946 era mutM TRUE 0.725 49.000 0.004 1.000   NA
 5760277 5760278 SPCG_0946 SPCG_0947 mutM coaE TRUE 0.963 -27.000 0.066 1.000 N NA
 5760278 5760279 SPCG_0947 SPCG_0948 coaE pmrA TRUE 0.943 -13.000 0.007 1.000 N NA
 5760279 5760280 SPCG_0948 SPCG_0949 pmrA secG FALSE 0.184 189.000 0.007 0.053 N NA
 5760280 5760281 SPCG_0949 SPCG_0950 secG rnr TRUE 0.404 102.000 0.064 1.000 N NA
 5760281 5760282 SPCG_0950 SPCG_0951 rnr smpB TRUE 0.982 -37.000 0.143 0.028 N NA
 5760282 5760283 SPCG_0951 SPCG_0952 smpB tehB TRUE 0.857 10.000 0.002 1.000 N NA
 5760283 5760284 SPCG_0952 SPCG_0953 tehB coiA FALSE 0.233 73.000 0.000 NA   NA
 5760284 5760285 SPCG_0953 SPCG_0954 coiA   TRUE 0.966 19.000 0.204 NA   NA
 5760285 5760286 SPCG_0954 SPCG_0955     TRUE 0.957 2.000 0.024 1.000   NA
 5760286 5760287 SPCG_0955 SPCG_0956     TRUE 0.582 67.000 0.016 1.000   NA
 5760288 5760289 SPCG_0957 SPCG_0958   gpmB FALSE 0.007 761.000 0.000 1.000   NA
 5760289 5760290 SPCG_0958 SPCG_0959 gpmB ebsC TRUE 0.958 0.000 0.018 NA   NA
 5760290 5760291 SPCG_0959 SPCG_0960 ebsC   TRUE 0.952 0.000 0.012 NA   NA
 5760291 5760292 SPCG_0960 SPCG_0961     TRUE 0.430 95.000 0.062 NA   NA
 5760293 5760294 SPCG_0962 SPCG_0963 gcaD   TRUE 0.909 10.000 0.015 1.000 N NA
 5760294 5760295 SPCG_0963 SPCG_0964     TRUE 0.954 -21.000 0.025 NA   NA
 5760295 5760296 SPCG_0964 SPCG_0965   pfs TRUE 0.935 17.000 0.041 NA   NA
 5760296 5760297 SPCG_0965 SPCG_0966 pfs   FALSE 0.205 77.000 0.000 NA   NA
 5760297 5760298 SPCG_0966 SPCG_0967   dnaQ TRUE 0.732 62.000 0.057 NA   NA
 5760298 5760299 SPCG_0967 SPCG_0968 dnaQ   TRUE 0.971 3.000 0.105 1.000 N NA
 5760299 5760300 SPCG_0968 SPCG_0969     FALSE 0.039 196.000 0.000 NA N NA
 5760300 5760301 SPCG_0969 SPCG_0970     FALSE 0.053 179.000 0.000 NA   NA
 5760301 5760302 SPCG_0970 SPCG_0971     FALSE 0.063 161.000 0.000 NA   NA
 5760304 5760305 SPCG_0973 SPCG_0974 ccdA   TRUE 0.997 -7.000 0.500 1.000 Y NA
 5760305 5760306 SPCG_0974 SPCG_0975   yfnA FALSE 0.014 362.000 0.000 1.000 N NA
 5760306 5760307 SPCG_0975 SPCG_0976 yfnA lmb FALSE 0.094 125.000 0.000 1.000 N NA
 5760307 5760308 SPCG_0976 SPCG_0977 lmb   TRUE 0.983 8.000 0.500 NA   NA
 5760308 5760309 SPCG_0977 SPCG_0978     FALSE 0.039 210.000 0.000 NA   NA
 5760309 5760310 SPCG_0978 SPCG_0979     FALSE 0.006 830.000 0.000 NA   NA
 5760310 5760311 SPCG_0979 SPCG_0980     TRUE 0.654 34.000 0.000 NA   NA
 5760313 5760314 SPCG_0982 SPCG_0983     TRUE 0.691 29.000 0.000 NA   NA
 5760317 5760318 SPCG_0986 SPCG_0987     TRUE 0.767 16.000 0.000 NA   NA
 5760318 5760319 SPCG_0987 SPCG_0988     TRUE 0.989 -7.000 0.286 NA   NA
 5760319 5760320 SPCG_0988 SPCG_0989   mscL FALSE 0.100 116.000 0.000 NA   NA
 5760320 5760321 SPCG_0989 SPCG_0990 mscL   TRUE 0.461 82.000 0.003 0.057   NA
 5760322 5760323 SPCG_0991 SPCG_t07     FALSE 0.116 100.000 0.000 NA   NA
 5760323 5760324 SPCG_t07 SPCG_0992     FALSE 0.108 106.000 0.000 NA   NA
 5760324 5760325 SPCG_0992 SPCG_0993   asd FALSE 0.033 226.000 0.000 NA   NA
 5760325 5760326 SPCG_0993 SPCG_0994 asd dapA TRUE 0.911 56.000 0.063 1.000 Y NA
 5760327 5760328 SPCG_0995 SPCG_0996 thdF xylH FALSE 0.273 71.000 0.000 1.000   NA
 5760329 5760330 SPCG_0997 SPCG_0998 tdk prfA TRUE 0.976 -3.000 0.062 1.000 N NA
 5760330 5760331 SPCG_0998 SPCG_0999 prfA hemK TRUE 0.990 0.000 0.084 1.000 Y NA
 5760331 5760332 SPCG_0999 SPCG_1000 hemK   TRUE 0.973 -43.000 0.029 NA Y NA
 5760332 5760333 SPCG_1000 SPCG_1001     TRUE 0.922 -37.000 0.012 NA   NA
 5760333 5760334 SPCG_1001 SPCG_1002   glyA TRUE 0.747 62.000 0.056 1.000   NA
 5760334 5760335 SPCG_1002 SPCG_1003 glyA   TRUE 0.970 -25.000 0.103 NA   NA
 5760335 5760336 SPCG_1003 SPCG_1004     TRUE 0.980 0.000 0.128 NA   NA
 5760336 5760337 SPCG_1004 SPCG_1005     TRUE 0.501 74.000 0.019 NA   NA
 5760337 5760338 SPCG_1005 SPCG_1006     TRUE 0.815 -31.000 0.000 NA   NA
 5760338 5760339 SPCG_1006 SPCG_1007     TRUE 0.751 13.000 0.000 NA   NA
 5760339 5760340 SPCG_1007 SPCG_1008     FALSE 0.005 1126.000 0.000 NA   NA
 5760340 5760341 SPCG_1008 SPCG_1009     FALSE 0.096 121.000 0.000 NA   NA
 5760343 5760344 SPCG_1011 SPCG_1012     TRUE 0.998 0.000 0.800 0.040 Y NA
 5760344 5760345 SPCG_1012 SPCG_1013     TRUE 0.994 0.000 0.250 1.000 Y NA
 5760345 5760346 SPCG_1013 SPCG_1014     FALSE 0.006 869.000 0.000 NA   NA
 5760346 5760347 SPCG_1014 SPCG_1015     FALSE 0.018 305.000 0.000 NA   NA
 5760347 5760348 SPCG_1015 SPCG_1016     TRUE 0.762 18.000 0.000 NA   NA
 5760348 5760349 SPCG_1016 SPCG_1017     FALSE 0.011 433.000 0.000 NA   NA
 5760349 5760350 SPCG_1017 SPCG_1018     TRUE 0.498 174.000 0.500 NA   NA
 5760350 5760351 SPCG_1018 SPCG_1019     FALSE 0.007 684.000 0.000 NA   NA
 5760351 5760352 SPCG_1019 SPCG_1020     TRUE 0.697 92.000 0.400 NA   NA
 5760352 5760353 SPCG_1020 SPCG_1021     FALSE 0.034 223.000 0.000 NA   NA
 5760353 5760354 SPCG_1021 SPCG_1022     FALSE 0.017 313.000 0.000 NA   NA
 5760354 5760355 SPCG_1022 SPCG_1023     TRUE 0.796 62.000 0.125 NA   NA
 5760355 5760356 SPCG_1023 SPCG_1024     TRUE 0.418 58.000 0.000 NA   NA
 5760356 5760357 SPCG_1024 SPCG_1025     TRUE 0.760 61.000 0.077 NA N NA
 5760357 5760358 SPCG_1025 SPCG_1026   nplT FALSE 0.081 139.000 0.000 1.000 N NA
 5760358 5760359 SPCG_1026 SPCG_1027 nplT   TRUE 0.368 86.000 0.016 NA   NA
 5760359 5760360 SPCG_1027 SPCG_1028     TRUE 0.543 46.000 0.000 NA   NA
 5760360 5760361 SPCG_1028 SPCG_1029     FALSE 0.012 388.000 0.000 NA   NA
 5760361 5760362 SPCG_1029 SPCG_1030     TRUE 0.890 0.000 0.000 1.000   NA
 5760362 5760363 SPCG_1030 SPCG_1031     TRUE 0.700 28.000 0.000 NA   NA
 5760363 5760364 SPCG_1031 SPCG_1032     TRUE 0.834 3.000 0.000 NA   NA
 5760364 5760365 SPCG_1032 SPCG_1033     FALSE 0.006 832.000 0.000 NA   NA
 5760365 5760366 SPCG_1033 SPCG_1034     TRUE 0.760 10.000 0.000 NA   NA
 5760366 5760367 SPCG_1034 SPCG_1035     TRUE 0.867 -13.000 0.000 NA   NA
 5760367 5760368 SPCG_1035 SPCG_1036     FALSE 0.027 253.000 0.000 NA   NA
 5760368 5760369 SPCG_1036 SPCG_1037     TRUE 0.762 18.000 0.000 NA   NA
 5760371 5760372 SPCG_1039 SPCG_1040   topA FALSE 0.072 149.000 0.000 NA   NA
 5760372 5760373 SPCG_1040 SPCG_1041 topA   FALSE 0.034 221.000 0.000 NA   NA
 5760373 5760374 SPCG_1041 SPCG_1042   cutC FALSE 0.329 93.000 0.015 NA   NA
 5760374 5760375 SPCG_1042 SPCG_1043 cutC   TRUE 0.845 44.000 0.040 NA   NA
 5760375 5760376 SPCG_1043 SPCG_1044     TRUE 0.751 19.000 0.000 NA   NA
 5760376 5760377 SPCG_1044 SPCG_1045     FALSE 0.285 116.000 0.000 0.001   NA
 5760377 5760378 SPCG_1045 SPCG_1046     TRUE 0.778 12.000 0.000 1.000   NA
 5760378 5760379 SPCG_1046 SPCG_1047     TRUE 0.952 -3.000 0.007 NA   NA
 5760379 5760380 SPCG_1047 SPCG_1048     TRUE 0.813 4.000 0.000 NA   NA
 5760380 5760381 SPCG_1048 SPCG_1049     FALSE 0.035 219.000 0.000 NA   NA
 5760381 5760382 SPCG_1049 SPCG_1050     FALSE 0.116 100.000 0.000 NA   NA
 5760382 5760383 SPCG_1050 SPCG_1051     TRUE 0.851 -19.000 0.000 NA   NA
 5760383 5760384 SPCG_1051 SPCG_1052     FALSE 0.063 162.000 0.000 NA   NA
 5760384 5760385 SPCG_1052 SPCG_1053     TRUE 0.993 -40.000 0.467 NA Y NA
 5760385 5760386 SPCG_1053 SPCG_1054   guaC FALSE 0.048 175.000 0.000 NA N NA
 5760386 5760387 SPCG_1054 SPCG_t08 guaC   FALSE 0.326 64.000 0.000 NA   NA
 5760387 5760388 SPCG_t08 SPCG_1055   rncS FALSE 0.051 183.000 0.000 NA   NA
 5760388 5760389 SPCG_1055 SPCG_1056 rncS   TRUE 0.981 -9.000 0.120 1.000 N NA
 5760389 5760390 SPCG_1056 SPCG_1057     TRUE 0.954 -3.000 0.006 1.000   NA
 5760390 5760391 SPCG_1057 SPCG_1058     TRUE 0.989 0.000 0.103 0.017   NA
 5760391 5760392 SPCG_1058 SPCG_1059   ftsY TRUE 0.949 4.000 0.005 0.076   NA
 5760393 5760394 SPCG_1060 SPCG_1061 zwf   FALSE 0.216 149.000 0.021 1.000 N NA
 5760394 5760395 SPCG_1061 SPCG_1062     TRUE 0.995 0.000 0.326 1.000 Y NA
 5760396 5760397 SPCG_1063 SPCG_1064   uvrB FALSE 0.323 77.000 0.002 NA   NA
 5760397 5760398 SPCG_1064 SPCG_1065 uvrB   TRUE 0.855 10.000 0.002 1.000 N NA
 5760398 5760399 SPCG_1065 SPCG_1066     TRUE 0.965 -34.000 0.014 0.012   NA
 5760399 5760400 SPCG_1066 SPCG_1067     TRUE 0.530 74.000 0.021 1.000   NA
 5760401 5760402 SPCG_1068 SPCG_1069     TRUE 0.953 12.000 0.107 NA   NA
 5760402 5760403 SPCG_1069 SPCG_1070     FALSE 0.111 228.000 0.026 NA   NA
 5760403 5760404 SPCG_1070 SPCG_1071     TRUE 0.954 -16.000 0.019 NA   NA
 5760404 5760405 SPCG_1071 SPCG_1072     TRUE 0.909 12.000 0.013 1.000   NA
 5760406 5760407 SPCG_1073 SPCG_1074 fhs mutY FALSE 0.016 329.000 0.000 1.000 N NA
 5760407 5760408 SPCG_1074 SPCG_1075 mutY   TRUE 0.895 4.000 0.002 1.000 N NA
 5760408 5760409 SPCG_1075 SPCG_1076     TRUE 0.998 -7.000 0.597 0.010 Y NA
 5760409 5760410 SPCG_1076 SPCG_1077   vicX TRUE 0.963 2.000 0.038 1.000   NA
 5760410 5760411 SPCG_1077 SPCG_1078 vicX   TRUE 0.679 31.000 0.000 NA   NA
 5760411 5760412 SPCG_1078 SPCG_1079     TRUE 0.991 -7.000 0.400 NA   NA
 5760412 5760413 SPCG_1079 SPCG_1080     TRUE 0.834 -25.000 0.000 NA   NA
 5760415 5760416 SPCG_1082 SPCG_1083     TRUE 0.950 0.000 0.013 NA N NA
 5760416 5760417 SPCG_1083 SPCG_1084     FALSE 0.025 244.000 0.000 NA N NA
 5760417 5760418 SPCG_1084 SPCG_1085     FALSE 0.084 148.000 0.000 1.000   NA
 5760418 5760419 SPCG_1085 SPCG_1086     TRUE 0.907 22.000 0.000 0.001   NA
 5760419 5760420 SPCG_1086 SPCG_1087     FALSE 0.346 96.000 0.027 NA   NA
 5760420 5760421 SPCG_1087 SPCG_1088     TRUE 0.925 12.000 0.033 NA   NA
 5760421 5760422 SPCG_1088 SPCG_1089   truB FALSE 0.115 101.000 0.000 NA   NA
 5760422 5760423 SPCG_1089 SPCG_1090 truB   FALSE 0.072 149.000 0.000 NA   NA
 5760423 5760424 SPCG_1090 SPCG_1091     TRUE 0.888 -3.000 0.000 NA   NA
 5760424 5760425 SPCG_1091 SPCG_1092   udK FALSE 0.107 108.000 0.000 NA   NA
 5760425 5760426 SPCG_1092 SPCG_1093 udK xseA FALSE 0.174 122.000 0.002 1.000 N NA
 5760426 5760427 SPCG_1093 SPCG_1094 xseA xseB TRUE 0.997 -22.000 0.412 0.001 Y NA
 5760427 5760428 SPCG_1094 SPCG_1095 xseB   TRUE 0.981 -3.000 0.100 1.000 N NA
 5760428 5760429 SPCG_1095 SPCG_1096     TRUE 0.974 -7.000 0.058 1.000 N NA
 5760429 5760430 SPCG_1096 SPCG_1097   ahrC TRUE 0.972 -7.000 0.048 1.000 N NA
 5760430 5760431 SPCG_1097 SPCG_1098 ahrC recN TRUE 0.936 7.000 0.037 1.000 N NA
 5760431 5760432 SPCG_1098 SPCG_1099 recN pphA TRUE 0.933 2.000 0.005 1.000   NA
 5760432 5760433 SPCG_1099 SPCG_1100 pphA   TRUE 0.870 16.000 0.002 1.000   NA
 5760433 5760434 SPCG_1100 SPCG_1101     FALSE 0.012 413.000 0.000 1.000 N NA
 5760434 5760435 SPCG_1101 SPCG_1102     TRUE 0.925 38.000 0.000 0.019 Y NA
 5760435 5760436 SPCG_1102 SPCG_1103     FALSE 0.011 438.000 0.000 1.000 N NA
 5760436 5760437 SPCG_1103 SPCG_1104     FALSE 0.068 169.000 0.000 1.000   NA
 5760437 5760438 SPCG_1104 SPCG_1105   lacA FALSE 0.076 157.000 0.000 1.000   NA
 5760438 5760439 SPCG_1105 SPCG_1106 lacA lacB TRUE 0.992 31.000 0.333 0.001 Y NA
 5760439 5760440 SPCG_1106 SPCG_1107 lacB lacC TRUE 0.992 11.000 0.500 1.000 Y NA
 5760440 5760441 SPCG_1107 SPCG_1108 lacC lacD TRUE 0.998 2.000 0.800 0.001 Y NA
 5760441 5760442 SPCG_1108 SPCG_1109 lacD lacT FALSE 0.036 234.000 0.000 1.000   NA
 5760442 5760443 SPCG_1109 SPCG_1110 lacT   TRUE 0.970 36.000 0.500 1.000   NA
 5760443 5760444 SPCG_1110 SPCG_1111     TRUE 0.997 -28.000 0.600 0.019 Y NA
 5760444 5760445 SPCG_1111 SPCG_1112   lacG TRUE 0.481 206.000 0.200 1.000 Y NA
 5760445 5760446 SPCG_1112 SPCG_1113 lacG   TRUE 0.958 43.000 0.500 NA   NA
 5760448 5760449 SPCG_1115 SPCG_1116     FALSE 0.021 281.000 0.000 NA   NA
 5760450 5760451 SPCG_1117 SPCG_1118 nrdF nrdE TRUE 0.797 188.000 0.500 0.001 Y NA
 5760451 5760452 SPCG_1118 SPCG_1119 nrdE nrdH TRUE 0.800 81.000 0.562 1.000 N NA
 5760453 5760454 SPCG_1120 SPCG_1121     TRUE 0.993 6.000 0.240 0.020 Y NA
 5760454 5760455 SPCG_1121 SPCG_1122     FALSE 0.035 219.000 0.000 NA   NA
 5760455 5760456 SPCG_1122 SPCG_1123     FALSE 0.077 142.000 0.000 NA   NA
 5760456 5760457 SPCG_1123 SPCG_1124     FALSE 0.216 76.000 0.000 NA   NA
 5760457 5760458 SPCG_1124 SPCG_1125     FALSE 0.061 165.000 0.000 NA   NA
 5760458 5760459 SPCG_1125 SPCG_1126     TRUE 0.731 22.000 0.000 NA   NA
 5760459 5760460 SPCG_1126 SPCG_1127     TRUE 0.418 58.000 0.000 NA   NA
 5760460 5760461 SPCG_1127 SPCG_1128   ung FALSE 0.096 121.000 0.000 NA   NA
 5760461 5760462 SPCG_1128 SPCG_1129 ung mutX TRUE 0.973 10.000 0.043 1.000 Y NA
 5760462 5760463 SPCG_1129 SPCG_1130 mutX   TRUE 0.875 13.000 0.005 1.000 N NA
 5760463 5760464 SPCG_1130 SPCG_1131     FALSE 0.020 285.000 0.000 1.000 N NA
 5760466 5760467 SPCG_1133 SPCG_1134 acoA acoB TRUE 0.997 16.000 0.769 0.001 Y NA
 5760467 5760468 SPCG_1134 SPCG_1135 acoB acoC TRUE 0.690 134.000 0.103 0.046 Y NA
 5760468 5760469 SPCG_1135 SPCG_1136 acoC acoL TRUE 0.966 46.000 0.227 1.000 Y NA
 5760469 5760470 SPCG_1136 SPCG_1137 acoL   TRUE 0.817 64.000 0.200 1.000 N NA
 5760471 5760472 SPCG_1138 SPCG_1139 xerC   FALSE 0.008 584.000 0.000 1.000 N NA
 5760472 5760473 SPCG_1139 SPCG_1140     TRUE 0.924 1.000 0.002 1.000 N NA
 5760473 5760474 SPCG_1140 SPCG_1141     TRUE 0.982 -13.000 0.148 1.000   NA
 5760474 5760475 SPCG_1141 SPCG_1142   zmpD FALSE 0.033 245.000 0.000 1.000   NA
 5760475 5760476 SPCG_1142 SPCG_1143 zmpD iga TRUE 0.813 44.000 0.000 0.002   NA
 5760476 5760477 SPCG_1143 SPCG_1144 iga   FALSE 0.039 209.000 0.000 NA   NA
 5760477 5760478 SPCG_1144 SPCG_1145   rexA FALSE 0.144 170.000 0.010 NA   NA
 5760478 5760479 SPCG_1145 SPCG_1146 rexA rexB TRUE 0.994 -3.000 0.070 0.074 Y NA
 5760480 5760481 SPCG_1147 SPCG_1148     FALSE 0.008 549.000 0.000 NA   NA
 5760481 5760482 SPCG_1148 SPCG_1149     FALSE 0.021 281.000 0.000 NA   NA
 5760485 5760486 SPCG_1152 SPCG_1153     TRUE 0.941 -31.000 0.000 0.001   NA
 5760486 5760487 SPCG_1153 SPCG_1154     TRUE 0.951 -3.000 0.007 NA   NA
 5760487 5760488 SPCG_1154 SPCG_1155     FALSE 0.204 115.000 0.005 NA   NA
 5760488 5760489 SPCG_1155 SPCG_1156   glgA TRUE 0.610 59.000 0.003 1.000   NA
 5760489 5760490 SPCG_1156 SPCG_1157 glgA glgD TRUE 0.996 -3.000 0.395 1.000 Y NA
 5760490 5760491 SPCG_1157 SPCG_1158 glgD glgC TRUE 0.999 -10.000 0.810 0.001 Y NA
 5760491 5760492 SPCG_1158 SPCG_1159 glgC glgB TRUE 0.997 -10.000 0.317 0.002 Y NA
 5760492 5760493 SPCG_1159 SPCG_1160 glgB gapN FALSE 0.011 449.000 0.000 1.000 N NA
 5760493 5760494 SPCG_1160 SPCG_1161 gapN   FALSE 0.016 332.000 0.000 NA   NA
 5760494 5760495 SPCG_1161 SPCG_1162   pulI TRUE 0.496 51.000 0.000 NA   NA
 5760495 5760496 SPCG_1162 SPCG_1163 pulI ligA FALSE 0.182 112.000 0.002 1.000 N NA
 5760496 5760497 SPCG_1163 SPCG_1164 ligA   FALSE 0.230 93.000 0.002 NA   NA
 5760497 5760498 SPCG_1164 SPCG_1165     FALSE 0.183 80.000 0.000 NA   NA
 5760498 5760499 SPCG_1165 SPCG_1166     FALSE 0.085 134.000 0.000 NA   NA
 5760499 5760500 SPCG_1166 SPCG_1167     TRUE 0.947 -27.000 0.019 1.000   NA
 5760500 5760501 SPCG_1167 SPCG_1168   hlpA FALSE 0.013 430.000 0.000 1.000   NA
 5760501 5760502 SPCG_1168 SPCG_1169 hlpA   TRUE 0.428 107.000 0.098 NA   NA
 5760505 5760506 SPCG_1172 SPCG_1173     TRUE 0.825 -28.000 0.000 NA   NA
 5760507 5760508 SPCG_1174 SPCG_1175 rpmA   TRUE 0.985 17.000 0.203 NA Y NA
 5760508 5760509 SPCG_1175 SPCG_1176   rplU TRUE 0.986 16.000 0.208 NA Y NA
 5760509 5760510 SPCG_1176 SPCG_1177 rplU   FALSE 0.102 113.000 0.000 NA   NA
 5760512 5760513 SPCG_1179 SPCG_1180 pta rluD TRUE 0.873 44.000 0.067 1.000 N NA
 5760513 5760514 SPCG_1180 SPCG_1181 rluD ppnK TRUE 0.984 -3.000 0.150 1.000 N NA
 5760514 5760515 SPCG_1181 SPCG_1182 ppnK   TRUE 0.991 -28.000 0.725 1.000   NA
 5760516 5760517 SPCG_1183 SPCG_1184     TRUE 0.484 113.000 0.145 1.000   NA
 5760517 5760518 SPCG_1184 SPCG_1185     TRUE 0.979 10.000 0.089 1.000 Y NA
 5760518 5760519 SPCG_1185 SPCG_1186     TRUE 0.969 5.000 0.166 NA   NA
 5760519 5760520 SPCG_1186 SPCG_1187     TRUE 0.959 -28.000 0.056 NA   NA
 5760520 5760521 SPCG_1187 SPCG_1188     TRUE 0.607 83.000 0.143 NA   NA
 5760521 5760522 SPCG_1188 SPCG_1189     TRUE 0.987 18.000 0.714 1.000   NA
 5760523 5760524 SPCG_1190 SPCG_1191 radC pcrA TRUE 0.966 28.000 0.005 0.015 Y NA
 5760524 5760525 SPCG_1191 SPCG_1192 pcrA   FALSE 0.238 191.000 0.000 0.074 Y NA
 5760525 5760526 SPCG_1192 SPCG_1193     TRUE 0.707 26.000 0.000 NA   NA
 5760526 5760527 SPCG_1193 SPCG_1194   map FALSE 0.010 462.000 0.000 NA   NA
 5760527 5760528 SPCG_1194 SPCG_1195 map   TRUE 0.972 16.000 0.235 1.000 N NA
 5760528 5760529 SPCG_1195 SPCG_1196     TRUE 0.990 -7.000 0.342 1.000 N NA
 5760529 5760530 SPCG_1196 SPCG_1197   murZ TRUE 0.938 10.000 0.052 1.000 N NA
 5760531 5760532 SPCG_1198 SPCG_1199     FALSE 0.021 281.000 0.000 NA   NA
 5760533 5760534 SPCG_1200 SPCG_1201   obg TRUE 0.893 10.000 0.009 NA   NA
 5760534 5760535 SPCG_1201 SPCG_1202 obg   TRUE 0.574 64.000 0.011 NA   NA
 5760535 5760536 SPCG_1202 SPCG_1203     TRUE 0.849 59.000 0.167 NA   NA
 5760536 5760537 SPCG_1203 SPCG_1204     TRUE 0.861 31.000 0.016 NA N NA
 5760537 5760538 SPCG_1204 SPCG_1205   cpoA TRUE 0.995 16.000 0.413 0.010 Y NA
 5760538 5760539 SPCG_1205 SPCG_1206 cpoA   TRUE 0.480 76.000 0.019 NA   NA
 5760539 5760540 SPCG_1206 SPCG_1207   rpoD TRUE 0.963 -19.000 0.044 NA   NA
 5760540 5760541 SPCG_1207 SPCG_1208 rpoD dnaG TRUE 0.980 3.000 0.209 1.000 N NA
 5760541 5760542 SPCG_1208 SPCG_1209 dnaG   TRUE 0.383 75.000 0.002 1.000   NA
 5760542 5760543 SPCG_1209 SPCG_1210     TRUE 0.996 -3.000 0.895 1.000   NA
 5760543 5760544 SPCG_1210 SPCG_1211     TRUE 0.831 69.000 0.368 NA   NA
 5760544 5760545 SPCG_1211 SPCG_1212   ppc FALSE 0.013 383.000 0.000 NA   NA
 5760545 5760546 SPCG_1212 SPCG_1213 ppc ftsW TRUE 0.918 20.000 0.028 1.000 N NA
 5760546 5760547 SPCG_1213 SPCG_1214 ftsW   FALSE 0.024 263.000 0.000 NA   NA
 5760547 5760548 SPCG_1214 SPCG_1215     FALSE 0.109 105.000 0.000 NA   NA
 5760548 5760549 SPCG_1215 SPCG_1216     FALSE 0.050 186.000 0.000 NA   NA
 5760549 5760550 SPCG_1216 SPCG_1217     FALSE 0.166 84.000 0.000 1.000 N NA
 5760550 5760551 SPCG_1217 SPCG_1218     FALSE 0.012 450.000 0.000 1.000   NA
 5760552 5760553 SPCG_1219 SPCG_1220     FALSE 0.093 125.000 0.000 NA   NA
 5760553 5760554 SPCG_1220 SPCG_1221     TRUE 0.862 -15.000 0.000 NA   NA
 5760555 5760556 SPCG_1222 SPCG_1223     FALSE 0.025 259.000 0.000 NA   NA
 5760556 5760557 SPCG_1223 SPCG_1224     TRUE 0.784 -49.000 0.000 NA   NA
 5760557 5760558 SPCG_1224 SPCG_1225     TRUE 0.782 61.000 0.073 1.000   NA
 5760558 5760559 SPCG_1225 SPCG_1226     FALSE 0.006 1154.000 0.000 1.000   NA
 5760559 5760560 SPCG_1226 SPCG_1227     FALSE 0.207 77.000 0.000 1.000 N NA
 5760560 5760561 SPCG_1227 SPCG_1228     FALSE 0.280 68.000 0.000 1.000 N NA
 5760563 5760564 SPCG_1230 SPCG_1231     FALSE 0.277 84.000 0.002 1.000 N NA
 5760564 5760565 SPCG_1231 SPCG_1232     TRUE 0.960 12.000 0.133 1.000   NA
 5760565 5760566 SPCG_1232 SPCG_1233   pck TRUE 0.991 -22.000 0.667 NA   NA
 5760566 5760567 SPCG_1233 SPCG_1234 pck   TRUE 0.945 17.000 0.074 NA N NA
 5760567 5760568 SPCG_1234 SPCG_1235   ispD TRUE 0.989 -13.000 0.367 1.000 N NA
 5760569 5760570 SPCG_1236 SPCG_1237   licD1 TRUE 0.982 10.000 0.500 NA   NA
 5760570 5760571 SPCG_1237 SPCG_1238 licD1 licD2 TRUE 0.996 -31.000 1.000 NA Y NA
 5760572 5760573 SPCG_1239 SPCG_1240 carB carA TRUE 0.371 313.000 0.117 0.001 Y NA
 5760573 5760574 SPCG_1240 SPCG_1241 carA pyrB TRUE 0.897 50.000 0.014 1.000 Y NA
 5760574 5760575 SPCG_1241 SPCG_1242 pyrB pyrR TRUE 0.987 19.000 0.247 1.000 Y NA
 5760575 5760576 SPCG_1242 SPCG_1243 pyrR nth FALSE 0.039 211.000 0.000 1.000 N NA
 5760576 5760577 SPCG_1243 SPCG_1244 nth   TRUE 0.930 0.000 0.002 NA   NA
 5760579 5760580 SPCG_1246 SPCG_1247 htpX lemA TRUE 0.987 -7.000 0.222 NA   NA
 5760581 5760582 SPCG_1248 SPCG_1249 gidB pyrP FALSE 0.017 316.000 0.000 1.000 N NA
 5760583 5760584 SPCG_1250 SPCG_1251 ffh   TRUE 0.963 12.000 0.151 1.000   NA
 5760584 5760585 SPCG_1251 SPCG_1252     FALSE 0.303 91.000 0.009 NA   NA
 5760586 5760587 SPCG_1253 SPCG_1254     TRUE 0.932 13.000 0.035 1.000   NA
 5760588 5760589 SPCG_1255 SPCG_1256     FALSE 0.009 486.000 0.000 NA   NA
 5760589 5760590 SPCG_1256 SPCG_1257     TRUE 0.751 13.000 0.000 NA   NA
 5760592 5760593 SPCG_1259 SPCG_t09     FALSE 0.102 113.000 0.000 NA   NA
 5760593 5760594 SPCG_t09 SPCG_1260   rplS TRUE 0.576 43.000 0.000 NA   NA
 5760594 5760595 SPCG_1260 SPCG_1261 rplS crcB FALSE 0.189 119.000 0.004 1.000 N NA
 5760595 5760596 SPCG_1261 SPCG_1262 crcB crcB TRUE 0.996 -6.000 0.160 0.073 Y NA
 5760596 5760597 SPCG_1262 SPCG_1263 crcB   TRUE 0.966 -3.000 0.023 1.000 N NA
 5760597 5760598 SPCG_1263 SPCG_1264   flaV TRUE 0.483 116.000 0.167 1.000 N NA
 5760599 5760600 SPCG_1265 SPCG_1266   rpmE TRUE 0.759 54.000 0.020 1.000   NA
 5760601 5760602 SPCG_1267 SPCG_1268     TRUE 0.931 -52.000 0.029 NA   NA
 5760602 5760603 SPCG_1268 SPCG_1269     TRUE 0.479 52.000 0.000 NA   NA
 5760603 5760604 SPCG_1269 SPCG_1270     TRUE 0.888 -3.000 0.000 NA   NA
 5760604 5760605 SPCG_1270 SPCG_1271     FALSE 0.028 250.000 0.000 NA   NA
 5760607 5760608 SPCG_1273 SPCG_1274     FALSE 0.022 280.000 0.000 NA   NA
 5760608 5760609 SPCG_1274 SPCG_1275     TRUE 0.825 -28.000 0.000 NA   NA
 5760609 5760610 SPCG_1275 SPCG_1276     FALSE 0.008 562.000 0.000 NA   NA
 5760610 5760611 SPCG_1276 SPCG_1277     TRUE 0.867 -13.000 0.000 NA   NA
 5760611 5760612 SPCG_1277 SPCG_1278     TRUE 0.793 5.000 0.000 NA   NA
 5760612 5760613 SPCG_1278 SPCG_1279     FALSE 0.012 384.000 0.000 NA   NA
 5760613 5760614 SPCG_1279 SPCG_1280     FALSE 0.301 66.000 0.000 NA   NA
 5760614 5760615 SPCG_1280 SPCG_1281     FALSE 0.095 122.000 0.000 NA   NA
 5760615 5760616 SPCG_1281 SPCG_1282     FALSE 0.238 72.000 0.000 NA   NA
 5760616 5760617 SPCG_1282 SPCG_1283     FALSE 0.158 85.000 0.000 NA   NA
 5760617 5760618 SPCG_1283 SPCG_1284     FALSE 0.025 262.000 0.000 NA   NA
 5760618 5760619 SPCG_1284 SPCG_1285     FALSE 0.013 378.000 0.000 NA   NA
 5760619 5760620 SPCG_1285 SPCG_1286     TRUE 0.834 -25.000 0.000 NA   NA
 5760620 5760621 SPCG_1286 SPCG_1287     TRUE 0.737 53.000 0.016 NA   NA
 5760621 5760622 SPCG_1287 SPCG_1288     FALSE 0.135 93.000 0.000 NA   NA
 5760622 5760623 SPCG_1288 SPCG_1289     FALSE 0.145 89.000 0.000 NA   NA
 5760623 5760624 SPCG_1289 SPCG_1290     FALSE 0.016 322.000 0.000 NA   NA
 5760626 5760627 SPCG_1292 SPCG_1293     FALSE 0.058 171.000 0.000 NA   NA
 5760627 5760628 SPCG_1293 SPCG_1294     FALSE 0.030 239.000 0.000 NA   NA
 5760628 5760629 SPCG_1294 SPCG_1295     FALSE 0.009 476.000 0.000 NA   NA
 5760629 5760630 SPCG_1295 SPCG_1296     TRUE 0.890 0.000 0.000 1.000   NA
 5760630 5760631 SPCG_1296 SPCG_1297     FALSE 0.257 70.000 0.000 NA   NA
 5760631 5760632 SPCG_1297 SPCG_1298     TRUE 0.624 38.000 0.000 NA   NA
 5760632 5760633 SPCG_1298 SPCG_1299     TRUE 0.888 -3.000 0.000 NA   NA
 5760633 5760634 SPCG_1299 SPCG_1300     TRUE 0.496 51.000 0.000 NA   NA
 5760634 5760635 SPCG_1300 SPCG_1301     TRUE 0.760 10.000 0.000 NA   NA
 5760637 5760638 SPCG_1303 SPCG_1304     TRUE 0.996 -7.000 1.000 NA   NA
 5760638 5760639 SPCG_1304 SPCG_1305     TRUE 0.857 75.000 0.667 NA   NA
 5760639 5760640 SPCG_1305 SPCG_1306     TRUE 0.664 33.000 0.000 NA   NA
 5760640 5760641 SPCG_1306 SPCG_1307     FALSE 0.070 152.000 0.000 NA   NA
 5760641 5760642 SPCG_1307 SPCG_1308     FALSE 0.106 109.000 0.000 NA   NA
 5760642 5760643 SPCG_1308 SPCG_1309     TRUE 0.752 12.000 0.000 NA   NA
 5760643 5760644 SPCG_1309 SPCG_1310     TRUE 0.876 -10.000 0.000 NA   NA
 5760644 5760645 SPCG_1310 SPCG_1311     TRUE 0.458 54.000 0.000 NA   NA
 5760645 5760646 SPCG_1311 SPCG_1312     TRUE 0.767 17.000 0.000 NA   NA
 5760646 5760647 SPCG_1312 SPCG_1313     TRUE 0.739 21.000 0.000 NA   NA
 5760647 5760648 SPCG_1313 SPCG_1314     TRUE 0.888 -3.000 0.000 NA   NA
 5760648 5760649 SPCG_1314 SPCG_1315     TRUE 0.815 -31.000 0.000 NA   NA
 5760649 5760650 SPCG_1315 SPCG_1316     FALSE 0.021 283.000 0.000 NA   NA
 5760650 5760651 SPCG_1316 SPCG_1317     TRUE 0.875 0.000 0.000 NA   NA
 5760652 5760653 SPCG_1318 SPCG_1319     TRUE 0.724 23.000 0.000 NA   NA
 5760653 5760654 SPCG_1319 SPCG_1320     TRUE 0.767 16.000 0.000 NA   NA
 5760654 5760655 SPCG_1320 SPCG_1321     TRUE 0.691 29.000 0.000 NA   NA
 5760655 5760656 SPCG_1321 SPCG_1322     TRUE 0.411 178.000 0.286 1.000   NA
 5760656 5760657 SPCG_1322 SPCG_1323     FALSE 0.026 257.000 0.000 1.000 N NA
 5760657 5760658 SPCG_1323 SPCG_1324     FALSE 0.018 338.000 0.000 1.000   NA
 5760658 5760659 SPCG_1324 SPCG_1325     TRUE 0.543 93.000 0.125 1.000   NA
 5760659 5760660 SPCG_1325 SPCG_1326     FALSE 0.006 1178.000 0.000 1.000   NA
 5760660 5760661 SPCG_1326 SPCG_1327     FALSE 0.029 257.000 0.000 1.000   NA
 5760661 5760662 SPCG_1327 SPCG_1328     FALSE 0.014 355.000 0.000 1.000 N NA
 5760662 5760663 SPCG_1328 SPCG_1329     TRUE 0.965 4.000 0.000 0.071 Y NA
 5760665 5760666 SPCG_1331 SPCG_1332     TRUE 0.888 -3.000 0.000 NA   NA
 5760666 5760667 SPCG_1332 SPCG_1333     FALSE 0.010 461.000 0.000 NA   NA
 5760667 5760668 SPCG_1333 SPCG_1334     FALSE 0.173 82.000 0.000 NA   NA
 5760668 5760669 SPCG_1334 SPCG_1335     TRUE 0.959 -3.000 0.000 0.010   NA
 5760670 5760671 SPCG_1336 SPCG_1337     TRUE 0.834 3.000 0.000 NA   NA
 5760671 5760672 SPCG_1337 SPCG_1338     FALSE 0.012 386.000 0.000 NA   NA
 5760672 5760673 SPCG_1338 SPCG_1339     TRUE 0.858 -16.000 0.000 NA   NA
 5760673 5760674 SPCG_1339 SPCG_1340     TRUE 0.627 99.000 0.333 NA   NA
 5760674 5760675 SPCG_1340 SPCG_1341     TRUE 0.990 -3.000 0.333 NA   NA
 5760676 5760677 SPCG_1342 SPCG_1343   rplL FALSE 0.301 66.000 0.000 NA   NA
 5760678 5760679 SPCG_1344 SPCG_1345 rplJ trzA FALSE 0.050 187.000 0.000 1.000 N NA
 5760679 5760680 SPCG_1345 SPCG_1346 trzA   FALSE 0.128 95.000 0.000 1.000 N NA
 5760680 5760681 SPCG_1346 SPCG_1347     TRUE 0.998 -37.000 0.895 0.008 Y NA
 5760681 5760682 SPCG_1347 SPCG_1348   msrA TRUE 0.750 58.000 0.035 1.000 N NA
 5760682 5760683 SPCG_1348 SPCG_1349 msrA thrB FALSE 0.019 295.000 0.000 1.000 N NA
 5760683 5760684 SPCG_1349 SPCG_1350 thrB hom TRUE 0.984 2.000 0.036 1.000 Y NA
 5760684 5760685 SPCG_1350 SPCG_1351 hom mecA FALSE 0.314 118.000 0.044 NA N NA
 5760685 5760686 SPCG_1351 SPCG_1352 mecA   FALSE 0.091 127.000 0.000 NA   NA
 5760686 5760687 SPCG_1352 SPCG_1353     TRUE 0.966 29.000 0.333 NA   NA
 5760687 5760688 SPCG_1353 SPCG_1354     TRUE 0.970 16.000 0.222 NA   NA
 5760688 5760689 SPCG_1354 SPCG_1355     TRUE 0.985 2.000 0.250 1.000   NA
 5760689 5760690 SPCG_1355 SPCG_1356   licD3 TRUE 0.997 -10.000 0.667 NA Y NA
 5760690 5760691 SPCG_1356 SPCG_1357 licD3   TRUE 0.496 51.000 0.000 NA   NA
 5760691 5760692 SPCG_1357 SPCG_1358     FALSE 0.098 118.000 0.000 NA   NA
 5760692 5760693 SPCG_1358 SPCG_1359   pheA TRUE 0.965 -3.000 0.025 NA N NA
 5760693 5760694 SPCG_1359 SPCG_1360 pheA aroK TRUE 0.987 -3.000 0.025 1.000 Y NA
 5760694 5760695 SPCG_1360 SPCG_1361 aroK aroA TRUE 0.984 -7.000 0.012 1.000 Y NA
 5760695 5760696 SPCG_1361 SPCG_1362 aroA   FALSE 0.314 80.000 0.003 NA   NA
 5760696 5760697 SPCG_1362 SPCG_1363   tyrA TRUE 0.940 11.000 0.058 NA   NA
 5760697 5760698 SPCG_1363 SPCG_1364 tyrA aroC TRUE 0.961 10.000 0.010 1.000 Y NA
 5760698 5760699 SPCG_1364 SPCG_1365 aroC aroB TRUE 0.990 10.000 0.110 0.003 Y NA
 5760699 5760700 SPCG_1365 SPCG_1366 aroB aroE TRUE 0.959 19.000 0.010 1.000 Y NA
 5760700 5760701 SPCG_1366 SPCG_1367 aroE aroD TRUE 0.996 -10.000 0.500 1.000 Y NA
 5760701 5760702 SPCG_1367 SPCG_1368 aroD   TRUE 0.982 -3.000 0.125 NA   NA
 5760702 5760703 SPCG_1368 SPCG_1369     FALSE 0.007 678.000 0.000 NA   NA
 5760703 5760704 SPCG_1369 SPCG_1370     TRUE 0.980 -46.000 0.341 NA   NA
 5760706 5760707 SPCG_1372 SPCG_1373 alaS   TRUE 0.867 22.000 0.006 NA   NA
 5760707 5760708 SPCG_1373 SPCG_1374     FALSE 0.007 654.000 0.000 NA   NA
 5760708 5760709 SPCG_1374 SPCG_1375     TRUE 0.997 -3.000 0.253 0.037 Y NA
 5760709 5760710 SPCG_1375 SPCG_1376     TRUE 0.996 -30.000 0.492 0.037 Y NA
 5760710 5760711 SPCG_1376 SPCG_1377     TRUE 0.997 -40.000 0.928 0.037 Y NA
 5760711 5760712 SPCG_1377 SPCG_1378   murB FALSE 0.230 160.000 0.041 1.000 N NA
 5760714 5760715 SPCG_1380 SPCG_1381   aldB TRUE 0.933 10.000 0.042 NA   NA
 5760717 5760718 SPCG_1383 SPCG_1384     FALSE 0.058 157.000 0.000 NA N NA
 5760718 5760719 SPCG_1384 SPCG_1385     TRUE 0.990 12.000 0.413 NA Y NA
 5760719 5760720 SPCG_1385 SPCG_1386     TRUE 0.996 13.000 0.542 0.002 Y NA
 5760720 5760721 SPCG_1386 SPCG_1387     TRUE 0.995 11.000 0.490 0.004 Y NA
 5760721 5760722 SPCG_1387 SPCG_1388     TRUE 0.999 -10.000 0.907 0.004 Y NA
 5760722 5760723 SPCG_1388 SPCG_1389     TRUE 0.994 0.000 0.206 1.000 Y NA
 5760723 5760724 SPCG_1389 SPCG_1390     FALSE 0.079 574.000 0.303 NA N NA
 5760724 5760725 SPCG_1390 SPCG_1391     TRUE 0.983 1.000 0.229 NA N NA
 5760725 5760726 SPCG_1391 SPCG_1392     TRUE 0.989 -10.000 0.337 NA   NA
 5760726 5760727 SPCG_1392 SPCG_1393   spxA TRUE 0.983 0.000 0.169 NA   NA
 5760727 5760728 SPCG_1393 SPCG_1394 spxA   FALSE 0.039 210.000 0.000 NA   NA
 5760728 5760729 SPCG_1394 SPCG_1395     TRUE 0.979 -43.000 0.330 NA   NA
 5760729 5760730 SPCG_1395 SPCG_1396     TRUE 0.939 11.000 0.055 1.000 N NA
 5760730 5760731 SPCG_1396 SPCG_1397   hemN TRUE 0.952 5.000 0.060 1.000 N NA
 5760731 5760732 SPCG_1397 SPCG_1398 hemN   TRUE 0.407 84.000 0.021 NA   NA
 5760732 5760733 SPCG_1398 SPCG_1399     TRUE 0.969 16.000 0.206 NA   NA
 5760733 5760734 SPCG_1399 SPCG_1400   lgt TRUE 0.972 1.000 0.079 NA   NA
 5760734 5760735 SPCG_1400 SPCG_1401 lgt hprK TRUE 0.989 -19.000 0.494 1.000 N NA
 5760735 5760736 SPCG_1401 SPCG_1402 hprK rpsU FALSE 0.253 115.000 0.011 1.000   NA
 5760736 5760737 SPCG_1402 SPCG_1403 rpsU nagB FALSE 0.251 116.000 0.011 1.000   NA
 5760739 5760740 SPCG_1405 SPCG_1406     FALSE 0.005 1461.000 0.000 NA   NA
 5760740 5760741 SPCG_1406 SPCG_1407   nadE FALSE 0.035 350.000 0.007 1.000 N NA
 5760741 5760742 SPCG_1407 SPCG_1408 nadE   TRUE 0.997 -3.000 0.194 0.003 Y NA
 5760742 5760743 SPCG_1408 SPCG_1409     FALSE 0.281 116.000 0.021 NA   NA
 5760743 5760744 SPCG_1409 SPCG_1410     FALSE 0.007 663.000 0.000 NA   NA
 5760744 5760745 SPCG_1410 SPCG_1411     TRUE 0.767 16.000 0.000 NA   NA
 5760745 5760746 SPCG_1411 SPCG_1412     TRUE 0.760 10.000 0.000 NA   NA
 5760746 5760747 SPCG_1412 SPCG_1413     TRUE 0.760 10.000 0.000 NA   NA
 5760747 5760748 SPCG_1413 SPCG_1414     FALSE 0.009 503.000 0.000 NA   NA
 5760751 5760752 SPCG_1417 SPCG_1418     FALSE 0.155 184.000 0.000 0.002   NA
 5760752 5760753 SPCG_1418 SPCG_1419     TRUE 0.901 -3.000 0.000 1.000   NA
 5760753 5760754 SPCG_1419 SPCG_1420     FALSE 0.028 247.000 0.000 NA   NA
 5760756 5760757 SPCG_1422 SPCG_1423     TRUE 0.995 -40.000 0.294 0.008 Y NA
 5760757 5760758 SPCG_1423 SPCG_1424     TRUE 0.757 11.000 0.000 NA   NA
 5760758 5760759 SPCG_1424 SPCG_1425     TRUE 0.991 -51.000 1.000 NA   NA
 5760759 5760760 SPCG_1425 SPCG_1426     TRUE 0.990 -12.000 0.357 1.000   NA
 5760761 5760762 SPCG_1427 SPCG_1428     FALSE 0.233 73.000 0.000 NA   NA
 5760762 5760763 SPCG_1428 SPCG_1429     TRUE 0.536 47.000 0.000 NA   NA
 5760763 5760764 SPCG_1429 SPCG_1430     FALSE 0.062 164.000 0.000 NA   NA
 5760764 5760765 SPCG_1430 SPCG_1431     FALSE 0.017 319.000 0.000 NA   NA
 5760765 5760766 SPCG_1431 SPCG_1432     TRUE 0.851 -19.000 0.000 NA   NA
 5760766 5760767 SPCG_1432 SPCG_1433     FALSE 0.028 250.000 0.000 NA   NA
 5760769 5760770 SPCG_1435 SPCG_1436     TRUE 0.784 -51.000 0.000 1.000 N NA
 5760770 5760771 SPCG_1436 SPCG_1437   cppA TRUE 0.990 -3.000 0.326 NA   NA
 5760771 5760772 SPCG_1437 SPCG_1438 cppA   FALSE 0.266 69.000 0.000 NA   NA
 5760772 5760773 SPCG_1438 SPCG_1439     TRUE 0.979 2.000 0.143 1.000   NA
 5760773 5760774 SPCG_1439 SPCG_1440     TRUE 0.731 22.000 0.000 NA   NA
 5760774 5760775 SPCG_1440 SPCG_1441     TRUE 0.948 1.000 0.013 NA   NA
 5760775 5760776 SPCG_1441 SPCG_1442     FALSE 0.131 94.000 0.000 NA   NA
 5760777 5760778 SPCG_1443 SPCG_1444 def trmH TRUE 0.946 12.000 0.002 1.000 Y NA
 5760779 5760780 SPCG_1445 SPCG_1446 trxB   TRUE 0.747 66.000 0.117 NA   NA
 5760780 5760781 SPCG_1446 SPCG_1447     TRUE 0.852 66.000 0.364 NA   NA
 5760781 5760782 SPCG_1447 SPCG_1448     TRUE 0.995 0.000 0.310 1.000 Y NA
 5760782 5760783 SPCG_1448 SPCG_1449     FALSE 0.161 158.000 0.010 1.000 N NA
 5760783 5760784 SPCG_1449 SPCG_1450   ogt TRUE 0.934 13.000 0.050 1.000 N NA
 5760784 5760785 SPCG_1450 SPCG_1451 ogt   TRUE 0.962 0.000 0.019 1.000   NA
 5760786 5760787 SPCG_1452 SPCG_1453     TRUE 0.985 -3.000 0.146 1.000   NA
 5760788 5760789 SPCG_1454 SPCG_1455     TRUE 0.762 18.000 0.000 NA   NA
 5760789 5760790 SPCG_1455 SPCG_1456     FALSE 0.008 488.000 0.000 NA N NA
 5760790 5760791 SPCG_1456 SPCG_1457   pdx1 TRUE 0.995 1.000 0.488 NA Y NA
 5760791 5760792 SPCG_1457 SPCG_1458 pdx1 nox FALSE 0.186 134.000 0.005 1.000   NA
 5760793 5760794 SPCG_1459 SPCG_1460 apbE   TRUE 0.870 60.000 0.243 NA   NA
 5760794 5760795 SPCG_1460 SPCG_1461     TRUE 0.983 19.000 0.588 NA   NA
 5760796 5760797 SPCG_1462 SPCG_1463   glyS TRUE 0.834 42.000 0.020 NA   NA
 5760797 5760798 SPCG_1463 SPCG_1464 glyS glyQ TRUE 0.649 286.000 0.651 0.001 Y NA
 5760798 5760799 SPCG_1464 SPCG_1465 glyQ   FALSE 0.092 192.000 0.003 NA   NA
 5760799 5760800 SPCG_1465 SPCG_1466     FALSE 0.026 255.000 0.000 NA   NA
 5760800 5760801 SPCG_1466 SPCG_1467   pgdA FALSE 0.115 114.000 0.000 1.000   NA
 5760801 5760802 SPCG_1467 SPCG_1468 pgdA   FALSE 0.051 184.000 0.000 NA   NA
 5760803 5760804 SPCG_1469 SPCG_1470 mocA   TRUE 0.987 -3.000 0.200 1.000   NA
 5760805 5760806 SPCG_1471 SPCG_1472     FALSE 0.024 265.000 0.000 NA   NA
 5760806 5760807 SPCG_1472 SPCG_1473     FALSE 0.027 252.000 0.000 NA   NA
 5760807 5760808 SPCG_1473 SPCG_1474   tuf FALSE 0.012 384.000 0.000 NA   NA
 5760808 5760809 SPCG_1474 SPCG_1475 tuf glpF FALSE 0.006 915.000 0.000 1.000 N NA
 5760809 5760810 SPCG_1475 SPCG_1476 glpF   FALSE 0.039 223.000 0.000 1.000   NA
 5760810 5760811 SPCG_1476 SPCG_1477     FALSE 0.017 317.000 0.000 NA   NA
 5760811 5760812 SPCG_1477 SPCG_1478     FALSE 0.007 638.000 0.000 NA   NA
 5760812 5760813 SPCG_1478 SPCG_1479     TRUE 0.807 -34.000 0.000 NA   NA
 5760813 5760814 SPCG_1479 SPCG_1480     FALSE 0.035 220.000 0.000 NA   NA
 5760816 5760817 SPCG_1482 SPCG_1483     FALSE 0.021 281.000 0.000 NA   NA
 5760819 5760820 SPCG_1485 SPCG_1486     TRUE 0.983 13.000 0.154 1.000 Y NA
 5760820 5760821 SPCG_1486 SPCG_1487     TRUE 0.982 10.000 0.130 1.000 Y NA
 5760821 5760822 SPCG_1487 SPCG_1488     FALSE 0.356 89.000 0.013 1.000   NA
 5760822 5760823 SPCG_1488 SPCG_1489     TRUE 0.984 -25.000 0.324 NA   NA
 5760825 5760826 SPCG_1491 SPCG_1492 atpC atpD TRUE 0.997 11.000 0.837 0.007 Y NA
 5760826 5760827 SPCG_1492 SPCG_1493 atpD atpG TRUE 0.942 86.000 0.724 0.007 Y NA
 5760827 5760828 SPCG_1493 SPCG_1494 atpG atpA TRUE 0.997 16.000 0.846 0.007 Y NA
 5760828 5760829 SPCG_1494 SPCG_1495 atpA atpH TRUE 0.997 15.000 0.864 0.007 Y NA
 5760829 5760830 SPCG_1495 SPCG_1496 atpH atpF TRUE 0.997 0.000 0.222 0.007 Y NA
 5760830 5760831 SPCG_1496 SPCG_1497 atpF atpB TRUE 0.984 14.000 0.032 0.008 Y NA
 5760831 5760832 SPCG_1497 SPCG_1498 atpB atpE TRUE 0.993 35.000 0.557 0.008 Y NA
 5760832 5760833 SPCG_1498 SPCG_1499 atpE   FALSE 0.226 75.000 0.000 1.000 N NA
 5760833 5760834 SPCG_1499 SPCG_1500     FALSE 0.012 413.000 0.000 1.000 N NA
 5760834 5760835 SPCG_1500 SPCG_1501     TRUE 0.654 34.000 0.000 NA   NA
 5760835 5760836 SPCG_1501 SPCG_1502   greA TRUE 0.700 28.000 0.000 NA   NA
 5760836 5760837 SPCG_1502 SPCG_1503 greA   TRUE 0.757 62.000 0.079 NA   NA
 5760837 5760838 SPCG_1503 SPCG_1504     TRUE 0.603 81.000 0.120 NA   NA
 5760838 5760839 SPCG_1504 SPCG_1505     TRUE 0.986 -3.000 0.037 0.011   NA
 5760839 5760840 SPCG_1505 SPCG_1506   murC TRUE 0.913 10.000 0.014 1.000   NA
 5760840 5760841 SPCG_1506 SPCG_1507 murC   TRUE 0.902 11.000 0.013 NA   NA
 5760841 5760842 SPCG_1507 SPCG_1508   snf TRUE 0.899 48.000 0.151 NA   NA
 5760842 5760843 SPCG_1508 SPCG_1509 snf patB FALSE 0.137 93.000 0.000 1.000 N NA
 5760843 5760844 SPCG_1509 SPCG_1510 patB metB TRUE 0.988 8.000 0.082 0.010 Y NA
 5760844 5760845 SPCG_1510 SPCG_1511 metB   FALSE 0.076 157.000 0.000 1.000   NA
 5760845 5760846 SPCG_1511 SPCG_1512     TRUE 0.886 -12.000 0.000 1.000   NA
 5760846 5760847 SPCG_1512 SPCG_1513     TRUE 0.910 9.000 0.000 0.008   NA
 5760847 5760848 SPCG_1513 SPCG_1514   aliB FALSE 0.127 172.000 0.000 0.051   NA
 5760848 5760849 SPCG_1514 SPCG_1515 aliB   TRUE 0.867 -13.000 0.000 NA   NA
 5760849 5760850 SPCG_1515 SPCG_1516     FALSE 0.096 121.000 0.000 NA   NA
 5760852 5760853 SPCG_1518 SPCG_1519     TRUE 0.942 37.000 0.208 NA   NA
 5760853 5760854 SPCG_1519 SPCG_1520   ppaC FALSE 0.285 87.000 0.005 NA   NA
 5760854 5760855 SPCG_1520 SPCG_1521 ppaC   TRUE 0.429 71.000 0.005 1.000 N NA
 5760855 5760856 SPCG_1521 SPCG_1522     TRUE 0.986 -10.000 0.209 1.000   NA
 5760856 5760857 SPCG_1522 SPCG_1523     TRUE 0.691 54.000 0.006 1.000   NA
 5760857 5760858 SPCG_1523 SPCG_1524     TRUE 0.977 -25.000 0.151 1.000   NA
 5760858 5760859 SPCG_1524 SPCG_1525   rpsR FALSE 0.022 295.000 0.000 1.000   NA
 5760859 5760860 SPCG_1525 SPCG_1526 rpsR ssbA TRUE 0.855 32.000 0.012 1.000 N NA
 5760860 5760861 SPCG_1526 SPCG_1527 ssbA rpsF TRUE 0.896 12.000 0.012 1.000 N NA
 5760861 5760862 SPCG_1527 SPCG_1528 rpsF asnS FALSE 0.222 154.000 0.000 1.000 Y NA
 5760862 5760863 SPCG_1528 SPCG_1529 asnS   TRUE 0.899 19.000 0.013 NA   NA
 5760863 5760864 SPCG_1529 SPCG_1530   aspB TRUE 0.966 -13.000 0.042 NA   NA
 5760864 5760865 SPCG_1530 SPCG_1531 aspB   TRUE 0.987 -3.000 0.205 NA   NA
 5760867 5760868 SPCG_1533 SPCG_1534     FALSE 0.247 94.000 0.004 NA   NA
 5760868 5760869 SPCG_1534 SPCG_1535     FALSE 0.225 153.000 0.030 NA   NA
 5760869 5760870 SPCG_1535 SPCG_1536   def TRUE 0.921 12.000 0.028 NA   NA
 5760870 5760871 SPCG_1536 SPCG_1537 def   FALSE 0.088 116.000 0.000 NA N NA
 5760871 5760872 SPCG_1537 SPCG_1538   pacL TRUE 0.724 13.000 0.000 NA N NA
 5760874 5760875 SPCG_1540 SPCG_1541     TRUE 0.977 -3.000 0.056 1.000   NA
 5760875 5760876 SPCG_1541 SPCG_1542   dapB TRUE 0.961 -3.000 0.015 1.000 N NA
 5760876 5760877 SPCG_1542 SPCG_1543 dapB   FALSE 0.050 266.000 0.004 NA   NA
 5760877 5760878 SPCG_1543 SPCG_1544     TRUE 0.977 2.000 0.139 NA   NA
 5760878 5760879 SPCG_1544 SPCG_1545   glmM TRUE 0.549 62.000 0.003 1.000   NA
 5760879 5760880 SPCG_1545 SPCG_1546 glmM   TRUE 0.952 24.000 0.150 NA   NA
 5760880 5760881 SPCG_1546 SPCG_1547     TRUE 0.991 -13.000 0.502 NA   NA
 5760883 5760884 SPCG_1549 SPCG_1550     TRUE 0.992 -3.000 0.470 NA   NA
 5760884 5760885 SPCG_1550 SPCG_1551     TRUE 0.987 -3.000 0.214 NA   NA
 5760885 5760886 SPCG_1551 SPCG_1552     TRUE 0.812 52.000 0.051 NA   NA
 5760886 5760887 SPCG_1552 SPCG_1553     TRUE 0.860 11.000 0.002 NA   NA
 5760887 5760888 SPCG_1553 SPCG_1554   clpX TRUE 0.960 3.000 0.043 1.000   NA
 5760888 5760889 SPCG_1554 SPCG_1555 clpX   TRUE 0.854 32.000 0.012 NA   NA
 5760889 5760890 SPCG_1555 SPCG_1556   dfr TRUE 0.965 0.000 0.030 NA   NA
 5760890 5760891 SPCG_1556 SPCG_1557 dfr   FALSE 0.181 130.000 0.005 1.000 N NA
 5760893 5760894 SPCG_1559 SPCG_1560 lytC tpiA TRUE 0.657 38.000 0.000 1.000   NA
 5760894 5760895 SPCG_1560 SPCG_1561 tpiA   TRUE 0.372 77.000 0.007 NA N NA
 5760895 5760896 SPCG_1561 SPCG_1562   metA TRUE 0.915 9.000 0.021 NA N NA
 5760896 5760897 SPCG_1562 SPCG_1563 metA apt FALSE 0.126 182.000 0.009 1.000 N NA
 5760897 5760898 SPCG_1563 SPCG_1564 apt   TRUE 0.408 70.000 0.002 1.000 N NA
 5760898 5760899 SPCG_1564 SPCG_1565     FALSE 0.009 501.000 0.000 1.000 N NA
 5760899 5760900 SPCG_1565 SPCG_t10     FALSE 0.021 283.000 0.000 NA   NA
 5760900 5760901 SPCG_t10 SPCG_1566   entB FALSE 0.173 82.000 0.000 NA   NA
 5760901 5760902 SPCG_1566 SPCG_1567 entB codY TRUE 0.976 0.000 0.083 1.000 N NA
 5760902 5760903 SPCG_1567 SPCG_1568 codY   FALSE 0.087 265.000 0.000 1.000 Y NA
 5760903 5760904 SPCG_1568 SPCG_1569   oxlT FALSE 0.038 199.000 0.000 NA N NA
 5760905 5760906 SPCG_1570 SPCG_1571 merA   FALSE 0.264 99.000 0.010 1.000 N NA
 5760906 5760907 SPCG_1571 SPCG_1572     TRUE 0.994 0.000 0.796 1.000   NA
 5760907 5760908 SPCG_1572 SPCG_1573     FALSE 0.104 126.000 0.000 1.000   NA
 5760909 5760910 SPCG_1574 SPCG_1575     TRUE 0.883 -7.000 0.000 NA   NA
 5760910 5760911 SPCG_1575 SPCG_1576     FALSE 0.008 575.000 0.000 NA   NA
 5760911 5760912 SPCG_1576 SPCG_1577   pdxK TRUE 0.984 -22.000 0.276 NA   NA
 5760912 5760913 SPCG_1577 SPCG_1578 pdxK truA TRUE 0.973 -10.000 0.058 1.000 N NA
 5760915 5760916 SPCG_1580 SPCG_1581     FALSE 0.030 240.000 0.000 NA   NA
 5760916 5760917 SPCG_1581 SPCG_1582   phnA TRUE 0.934 3.000 0.011 NA   NA
 5760917 5760918 SPCG_1582 SPCG_1583 phnA cmk FALSE 0.159 131.000 0.002 1.000 N NA
 5760918 5760919 SPCG_1583 SPCG_1584 cmk   TRUE 0.903 9.000 0.012 NA   NA
 5760921 5760922 SPCG_1586 SPCG_1587   gtrB FALSE 0.055 175.000 0.000 NA   NA
 5760922 5760923 SPCG_1587 SPCG_1588 gtrB galE TRUE 0.971 -52.000 0.030 NA Y NA
 5760923 5760924 SPCG_1588 SPCG_1589 galE   TRUE 0.847 -21.000 0.000 NA   NA
 5760924 5760925 SPCG_1589 SPCG_1590     FALSE 0.057 173.000 0.000 NA   NA
 5760925 5760926 SPCG_1590 SPCG_1591     TRUE 0.923 8.000 0.021 NA   NA
 5760926 5760927 SPCG_1591 SPCG_1592     TRUE 0.987 -13.000 0.283 NA   NA
 5760928 5760929 SPCG_1593 SPCG_1594     FALSE 0.149 87.000 0.000 NA   NA
 5760929 5760930 SPCG_1594 SPCG_1595     FALSE 0.121 108.000 0.000 1.000   NA
 5760930 5760931 SPCG_1595 SPCG_1596     TRUE 0.850 2.000 0.000 NA   NA
 5760931 5760932 SPCG_1596 SPCG_1597     FALSE 0.048 189.000 0.000 NA   NA
 5760935 5760936 SPCG_1600 SPCG_1601 cadD   FALSE 0.005 816.000 0.000 NA N NA
 5760936 5760937 SPCG_1601 SPCG_1602     TRUE 0.761 15.000 0.000 NA   NA
 5760937 5760938 SPCG_1602 SPCG_1603     TRUE 0.731 22.000 0.000 NA   NA
 5760939 5760940 SPCG_1604 SPCG_1605     FALSE 0.048 191.000 0.000 NA   NA
 5760940 5760941 SPCG_1605 SPCG_1606   thrS TRUE 0.909 19.000 0.018 NA   NA
 5760942 5760943 SPCG_1607 SPCG_1608     TRUE 0.998 -7.000 0.812 1.000 Y NA
 5760945 5760946 SPCG_1610 SPCG_1611     TRUE 0.851 76.000 0.667 NA   NA
 5760949 5760950 SPCG_1614 SPCG_1615     FALSE 0.087 131.000 0.000 NA   NA
 5760950 5760951 SPCG_1615 SPCG_1616     TRUE 0.751 19.000 0.000 NA   NA
 5760952 5760953 SPCG_1617 SPCG_1618   relA TRUE 0.949 30.000 0.177 1.000 N NA
 5760956 5760957 SPCG_1621 SPCG_1622     TRUE 0.989 -3.000 0.043 1.000 Y NA
 5760957 5760958 SPCG_1622 SPCG_1623     TRUE 0.970 20.000 0.038 1.000 Y NA
 5760958 5760959 SPCG_1623 SPCG_1624   tpx FALSE 0.256 96.000 0.007 1.000 N NA
 5760960 5760961 SPCG_1625 SPCG_1626     TRUE 0.980 -64.000 0.438 1.000 N NA
 5760961 5760962 SPCG_1626 SPCG_1627     FALSE 0.034 241.000 0.000 1.000   NA
 5760962 5760963 SPCG_1627 SPCG_1628   gpmA TRUE 0.502 53.000 0.000 1.000   NA
 5760963 5760964 SPCG_1628 SPCG_1629 gpmA   TRUE 0.496 51.000 0.000 NA   NA
 5760964 5760965 SPCG_1629 SPCG_1630     FALSE 0.046 194.000 0.000 NA   NA
 5760965 5760966 SPCG_1630 SPCG_1631   ileS FALSE 0.012 403.000 0.000 NA   NA
 5760966 5760967 SPCG_1631 SPCG_1632 ileS   FALSE 0.027 253.000 0.000 NA   NA
 5760967 5760968 SPCG_1632 SPCG_1633     TRUE 0.847 -21.000 0.000 NA   NA
 5760968 5760969 SPCG_1633 SPCG_1634   divIVA TRUE 0.993 -3.000 0.579 NA   NA
 5760969 5760970 SPCG_1634 SPCG_1635 divIVA   TRUE 0.990 -3.000 0.287 1.000   NA
 5760970 5760971 SPCG_1635 SPCG_1636     TRUE 0.990 0.000 0.370 NA   NA
 5760971 5760972 SPCG_1636 SPCG_1637     TRUE 0.966 10.000 0.194 NA   NA
 5760972 5760973 SPCG_1637 SPCG_1638     TRUE 0.937 5.000 0.030 NA   NA
 5760973 5760974 SPCG_1638 SPCG_1639   ftsZ TRUE 0.992 17.000 0.460 1.000 Y NA
 5760974 5760975 SPCG_1639 SPCG_1640 ftsZ ftsA FALSE 0.035 219.000 0.000 NA   NA
 5760975 5760976 SPCG_1640 SPCG_1641 ftsA   FALSE 0.340 91.000 0.016 NA   NA
 5760976 5760977 SPCG_1641 SPCG_1642   mutT TRUE 0.954 -13.000 0.016 1.000 N NA
 5760977 5760978 SPCG_1642 SPCG_1643 mutT murF TRUE 0.812 84.000 0.046 0.006 Y NA
 5760978 5760979 SPCG_1643 SPCG_1644 murF recR FALSE 0.137 176.000 0.010 1.000 N NA
 5760979 5760980 SPCG_1644 SPCG_1645 recR pbp2B TRUE 0.902 11.000 0.013 1.000 N NA
 5760982 5760983 SPCG_1647 SPCG_1648     TRUE 0.940 18.000 0.054 1.000 N NA
 5760983 5760984 SPCG_1648 SPCG_1649     TRUE 0.443 169.000 0.333 NA   NA
 5760984 5760985 SPCG_1649 SPCG_1650     TRUE 0.855 -18.000 0.000 NA   NA
 5760985 5760986 SPCG_1650 SPCG_1651     FALSE 0.044 197.000 0.000 NA   NA
 5760986 5760987 SPCG_1651 SPCG_1652     FALSE 0.120 97.000 0.000 NA   NA
 5760987 5760988 SPCG_1652 SPCG_1653     TRUE 0.719 24.000 0.000 NA   NA
 5760988 5760989 SPCG_1653 SPCG_1654     FALSE 0.123 96.000 0.000 NA   NA
 5760989 5760990 SPCG_1654 SPCG_1655     TRUE 0.997 16.000 1.000 0.035 Y NA
 5760990 5760991 SPCG_1655 SPCG_1656     FALSE 0.190 222.000 0.000 0.035 Y NA
 5760991 5760992 SPCG_1656 SPCG_1657     FALSE 0.284 125.000 0.000 1.000 Y NA
 5760992 5760993 SPCG_1657 SPCG_1658   nanE TRUE 0.987 4.000 0.132 1.000 Y NA
 5760993 5760994 SPCG_1658 SPCG_1659 nanE   FALSE 0.064 174.000 0.000 1.000   NA
 5760994 5760995 SPCG_1659 SPCG_1660   nanB TRUE 0.973 12.000 0.273 1.000   NA
 5760995 5760996 SPCG_1660 SPCG_1661 nanB   TRUE 0.925 18.000 0.000 1.000 Y NA
 5760996 5760997 SPCG_1661 SPCG_1662     TRUE 0.997 0.000 0.300 0.035 Y NA
 5760997 5760998 SPCG_1662 SPCG_1663     TRUE 0.882 79.000 0.180 0.035 Y NA
 5760998 5760999 SPCG_1663 SPCG_1664     TRUE 0.973 19.000 0.060 NA Y NA
 5760999 5761000 SPCG_1664 SPCG_1665   nanA FALSE 0.020 1014.000 0.000 NA Y NA
 5761000 5761001 SPCG_1665 SPCG_1666 nanA   FALSE 0.029 243.000 0.000 NA   NA
 5761001 5761002 SPCG_1666 SPCG_1667     FALSE 0.023 274.000 0.000 NA   NA
 5761002 5761003 SPCG_1667 SPCG_1668   axe1 FALSE 0.017 319.000 0.000 NA   NA
 5761003 5761004 SPCG_1668 SPCG_1669 axe1 recG FALSE 0.008 557.000 0.000 1.000 N NA
 5761004 5761005 SPCG_1669 SPCG_1670 recG alr TRUE 0.945 19.000 0.078 1.000 N NA
 5761005 5761006 SPCG_1670 SPCG_1671 alr acpS TRUE 0.964 -31.000 0.093 1.000 N NA
 5761006 5761007 SPCG_1671 SPCG_1672 acpS aroF TRUE 0.813 36.000 0.007 1.000 N NA
 5761007 5761008 SPCG_1672 SPCG_1673 aroF aroG TRUE 0.998 2.000 0.750 0.001 Y NA
 5761008 5761009 SPCG_1673 SPCG_1674 aroG secA TRUE 0.447 81.000 0.025 1.000 N NA
 5761009 5761010 SPCG_1674 SPCG_1675 secA   FALSE 0.207 146.000 0.017 NA   NA
 5761010 5761011 SPCG_1675 SPCG_1676     TRUE 0.757 11.000 0.000 NA   NA
 5761011 5761012 SPCG_1676 SPCG_1677     TRUE 0.813 4.000 0.000 NA   NA
 5761012 5761013 SPCG_1677 SPCG_1678     TRUE 0.787 -46.000 0.000 NA   NA
 5761013 5761014 SPCG_1678 SPCG_1679     FALSE 0.075 146.000 0.000 NA   NA
 5761014 5761015 SPCG_1679 SPCG_1680     FALSE 0.082 138.000 0.000 NA   NA
 5761015 5761016 SPCG_1680 SPCG_1681   serA FALSE 0.306 79.000 0.002 NA   NA
 5761016 5761017 SPCG_1681 SPCG_1682 serA   TRUE 0.886 14.000 0.005 1.000   NA
 5761017 5761018 SPCG_1682 SPCG_1683   dnaI TRUE 0.974 -3.000 0.048 1.000 N NA
 5761018 5761019 SPCG_1683 SPCG_1684 dnaI   TRUE 0.997 1.000 0.817 NA Y NA
 5761019 5761020 SPCG_1684 SPCG_1685     TRUE 0.975 1.000 0.109 NA N NA
 5761021 5761022 SPCG_1686 SPCG_1687     TRUE 0.987 -22.000 0.412 1.000 N NA
 5761022 5761023 SPCG_1687 SPCG_1688     TRUE 0.981 -64.000 0.471 NA   NA
 5761024 5761025 SPCG_1689 SPCG_1690     TRUE 0.976 -3.000 0.059 NA   NA
 5761025 5761026 SPCG_1690 SPCG_1691     FALSE 0.012 391.000 0.000 NA   NA
 5761028 5761029 SPCG_1693 SPCG_1694 scrK scrA TRUE 0.505 149.000 0.062 1.000 Y NA
 5761029 5761030 SPCG_1694 SPCG_1695 scrA   FALSE 0.113 102.000 0.000 NA   NA
 5761031 5761032 SPCG_1696 SPCG_1697 scrB scrR TRUE 0.991 -19.000 0.571 1.000 N NA
 5761033 5761034 SPCG_1698 SPCG_1699 mvaA mvaS TRUE 0.993 0.000 0.183 1.000 Y NA
 5761034 5761035 SPCG_1699 SPCG_1700 mvaS   FALSE 0.107 107.000 0.000 NA   NA
 5761035 5761036 SPCG_1700 SPCG_1701     TRUE 0.691 29.000 0.000 NA   NA
 5761036 5761037 SPCG_1701 SPCG_1702     TRUE 0.654 34.000 0.000 NA   NA
 5761037 5761038 SPCG_1702 SPCG_1703     FALSE 0.316 65.000 0.000 NA   NA
 5761038 5761039 SPCG_1703 SPCG_1704     TRUE 0.988 2.000 0.400 NA   NA
 5761039 5761040 SPCG_1704 SPCG_1705   pkn2 FALSE 0.231 115.000 0.010 NA   NA
 5761040 5761041 SPCG_1705 SPCG_1706 pkn2 pppL TRUE 0.997 -3.000 0.704 1.000 Y NA
 5761041 5761042 SPCG_1706 SPCG_1707 pppL sunL TRUE 0.947 15.000 0.074 1.000 N NA
 5761042 5761043 SPCG_1707 SPCG_1708 sunL fmt TRUE 0.995 -10.000 0.305 1.000 Y NA
 5761043 5761044 SPCG_1708 SPCG_1709 fmt   TRUE 0.940 13.000 0.052 1.000   NA
 5761044 5761045 SPCG_1709 SPCG_1710     TRUE 0.982 -6.000 0.016 0.009   NA
 5761045 5761046 SPCG_1710 SPCG_1711     TRUE 0.751 66.000 0.032 0.066   NA
 5761046 5761047 SPCG_1711 SPCG_1712   gmk TRUE 0.975 25.000 0.471 1.000 N NA
 5761047 5761048 SPCG_1712 SPCG_1713 gmk   FALSE 0.223 130.000 0.010 1.000   NA
 5761048 5761049 SPCG_1713 SPCG_1714     FALSE 0.048 191.000 0.000 NA   NA
 5761049 5761050 SPCG_1714 SPCG_1715     TRUE 0.989 4.000 0.615 NA   NA
 5761050 5761051 SPCG_1715 SPCG_1716     FALSE 0.043 199.000 0.000 NA   NA
 5761051 5761052 SPCG_1716 SPCG_1717     TRUE 0.951 10.000 0.094 NA   NA
 5761052 5761053 SPCG_1717 SPCG_1718     FALSE 0.097 305.000 0.085 NA   NA
 5761053 5761054 SPCG_1718 SPCG_1719     TRUE 0.884 13.000 0.008 NA   NA
 5761054 5761055 SPCG_1719 SPCG_1720     TRUE 0.958 1.000 0.024 1.000 N NA
 5761055 5761056 SPCG_1720 SPCG_1721   nadD TRUE 0.993 0.000 0.199 1.000 Y NA
 5761056 5761057 SPCG_1721 SPCG_1722 nadD   TRUE 0.871 52.000 0.150 NA N NA
 5761057 5761058 SPCG_1722 SPCG_1723     FALSE 0.195 200.000 0.068 NA   NA
 5761058 5761059 SPCG_1723 SPCG_1724     TRUE 0.989 3.000 0.555 NA   NA
 5761059 5761060 SPCG_1724 SPCG_1725   corA TRUE 0.919 -48.000 0.015 NA   NA
 5761060 5761061 SPCG_1725 SPCG_1726 corA   TRUE 0.859 57.000 0.059 0.067 N NA
 5761062 5761063 SPCG_1727 SPCG_1728 dctA   TRUE 0.534 68.000 0.013 NA   NA
 5761066 5761067 SPCG_1731 SPCG_1732     TRUE 0.991 5.000 1.000 NA   NA
 5761067 5761068 SPCG_1732 SPCG_1733     TRUE 0.988 2.000 0.400 NA   NA
 5761068 5761069 SPCG_1733 SPCG_1734     TRUE 0.991 -7.000 0.400 NA   NA
 5761069 5761070 SPCG_1734 SPCG_1735     TRUE 0.978 12.000 0.429 1.000 N NA
 5761070 5761071 SPCG_1735 SPCG_1736     TRUE 0.993 -7.000 0.571 NA   NA
 5761071 5761072 SPCG_1736 SPCG_1737     TRUE 0.995 -3.000 0.800 NA   NA
 5761072 5761073 SPCG_1737 SPCG_1738     TRUE 0.991 -16.000 0.571 NA   NA
 5761073 5761074 SPCG_1738 SPCG_1739     TRUE 0.886 10.000 0.007 NA   NA
 5761074 5761075 SPCG_1739 SPCG_1740     TRUE 0.581 57.000 0.002 NA   NA
 5761075 5761076 SPCG_1740 SPCG_1741     TRUE 0.362 227.000 0.500 NA   NA
 5761076 5761077 SPCG_1741 SPCG_1742     TRUE 0.997 9.000 0.750 0.004 Y NA
 5761077 5761078 SPCG_1742 SPCG_1743     TRUE 0.946 31.000 0.000 0.004 Y NA
 5761078 5761079 SPCG_1743 SPCG_1744     TRUE 0.962 10.000 0.154 NA   NA
 5761079 5761080 SPCG_1744 SPCG_1745     TRUE 0.610 40.000 0.000 NA   NA
 5761080 5761081 SPCG_1745 SPCG_1746     TRUE 0.767 9.000 0.000 NA   NA
 5761081 5761082 SPCG_1746 SPCG_1747     FALSE 0.010 455.000 0.000 NA   NA
 5761082 5761083 SPCG_1747 SPCG_1748     TRUE 0.785 10.000 0.000 1.000   NA
 5761083 5761084 SPCG_1748 SPCG_1749     TRUE 0.901 -3.000 0.000 1.000   NA
 5761084 5761085 SPCG_1749 SPCG_1750     TRUE 0.482 55.000 0.000 1.000   NA
 5761085 5761086 SPCG_1750 SPCG_1751     FALSE 0.014 361.000 0.000 NA   NA
 11495442 5761083   SPCG_1748     FALSE NA 2362.000 0.000 NA   NA
 11637805 5761083   SPCG_1748     FALSE NA 2362.000 0.000 NA   NA
 11780197 5761083   SPCG_1748     FALSE NA 2362.000 0.000 NA   NA
 11495443 5761083   SPCG_1748     FALSE NA 2391.000 0.000 NA   NA
 11637806 5761083   SPCG_1748     FALSE NA 2391.000 0.000 NA   NA
 11780198 5761083   SPCG_1748     FALSE NA 2391.000 0.000 NA   NA
 11495444 5761083   SPCG_1748     FALSE NA 2440.000 0.000 NA   NA
 11637807 5761083   SPCG_1748     FALSE NA 2440.000 0.000 NA   NA
 11780199 5761083   SPCG_1748     FALSE NA 2440.000 0.000 NA   NA
 11495445 5761083   SPCG_1748     FALSE NA 2469.000 0.000 NA   NA
 11637808 5761083   SPCG_1748     FALSE NA 2469.000 0.000 NA   NA
 11780200 5761083   SPCG_1748     FALSE NA 2469.000 0.000 NA   NA
 11495446 5761083   SPCG_1748     FALSE NA 2512.000 0.000 NA   NA
 11637809 5761083   SPCG_1748     FALSE NA 2512.000 0.000 NA   NA
 11780201 5761083   SPCG_1748     FALSE NA 2512.000 0.000 NA   NA
 11495447 5761083   SPCG_1748     FALSE NA 2541.000 0.000 NA   NA
 11637810 5761083   SPCG_1748     FALSE NA 2541.000 0.000 NA   NA
 11780202 5761083   SPCG_1748     FALSE NA 2541.000 0.000 NA   NA
 11495448 5761083   SPCG_1748     FALSE NA 2560.000 0.000 NA   NA
 11637811 5761083   SPCG_1748     FALSE NA 2560.000 0.000 NA   NA
 11780203 5761083   SPCG_1748     FALSE NA 2560.000 0.000 NA   NA
 11495449 5761083   SPCG_1748     FALSE NA 2589.000 0.000 NA   NA
 11637812 5761083   SPCG_1748     FALSE NA 2589.000 0.000 NA   NA
 11780204 5761083   SPCG_1748     FALSE NA 2589.000 0.000 NA   NA
 11495450 5761083   SPCG_1748     FALSE NA 2632.000 0.000 NA   NA
 11637813 5761083   SPCG_1748     FALSE NA 2632.000 0.000 NA   NA
 11780205 5761083   SPCG_1748     FALSE NA 2632.000 0.000 NA   NA
 11495451 5761083   SPCG_1748     FALSE NA 2661.000 0.000 NA   NA
 11637814 5761083   SPCG_1748     FALSE NA 2661.000 0.000 NA   NA
 11780206 5761083   SPCG_1748     FALSE NA 2661.000 0.000 NA   NA
 11495452 5761083   SPCG_1748     FALSE NA 2704.000 0.000 NA   NA
 11637815 5761083   SPCG_1748     FALSE NA 2704.000 0.000 NA   NA
 11780207 5761083   SPCG_1748     FALSE NA 2704.000 0.000 NA   NA
 11495453 5761083   SPCG_1748     FALSE NA 2733.000 0.000 NA   NA
 11637816 5761083   SPCG_1748     FALSE NA 2733.000 0.000 NA   NA
 11780208 5761083   SPCG_1748     FALSE NA 2733.000 0.000 NA   NA
 11495454 5761083   SPCG_1748     FALSE NA 2752.000 0.000 NA   NA
 11637817 5761083   SPCG_1748     FALSE NA 2752.000 0.000 NA   NA
 11780209 5761083   SPCG_1748     FALSE NA 2752.000 0.000 NA   NA
 11495455 5761083   SPCG_1748     FALSE NA 2781.000 0.000 NA   NA
 11637818 5761083   SPCG_1748     FALSE NA 2781.000 0.000 NA   NA
 11780210 5761083   SPCG_1748     FALSE NA 2781.000 0.000 NA   NA
 11495456 5761083   SPCG_1748     FALSE NA 2824.000 0.000 NA   NA
 11637819 5761083   SPCG_1748     FALSE NA 2824.000 0.000 NA   NA
 11780211 5761083   SPCG_1748     FALSE NA 2824.000 0.000 NA   NA
 11495457 5761083   SPCG_1748     FALSE NA 2853.000 0.000 NA   NA
 11637820 5761083   SPCG_1748     FALSE NA 2853.000 0.000 NA   NA
 11780212 5761083   SPCG_1748     FALSE NA 2853.000 0.000 NA   NA
 11495458 5761083   SPCG_1748     FALSE NA 2872.000 0.000 NA   NA
 11637821 5761083   SPCG_1748     FALSE NA 2872.000 0.000 NA   NA
 11780213 5761083   SPCG_1748     FALSE NA 2872.000 0.000 NA   NA
 11495459 5761083   SPCG_1748     FALSE NA 2901.000 0.000 NA   NA
 11637822 5761083   SPCG_1748     FALSE NA 2901.000 0.000 NA   NA
 11780214 5761083   SPCG_1748     FALSE NA 2901.000 0.000 NA   NA
 11495460 5761083   SPCG_1748     FALSE NA 2920.000 0.000 NA   NA
 11637823 5761083   SPCG_1748     FALSE NA 2920.000 0.000 NA   NA
 11780215 5761083   SPCG_1748     FALSE NA 2920.000 0.000 NA   NA
 11495461 5761083   SPCG_1748     FALSE NA 2949.000 0.000 NA   NA
 11637824 5761083   SPCG_1748     FALSE NA 2949.000 0.000 NA   NA
 11780216 5761083   SPCG_1748     FALSE NA 2949.000 0.000 NA   NA
 11495462 5761083   SPCG_1748     FALSE NA 2992.000 0.000 NA   NA
 11637825 5761083   SPCG_1748     FALSE NA 2992.000 0.000 NA   NA
 11780217 5761083   SPCG_1748     FALSE NA 2992.000 0.000 NA   NA
 11495463 5761083   SPCG_1748     FALSE NA 3021.000 0.000 NA   NA
 11637826 5761083   SPCG_1748     FALSE NA 3021.000 0.000 NA   NA
 11780218 5761083   SPCG_1748     FALSE NA 3021.000 0.000 NA   NA
 11495464 5761083   SPCG_1748     FALSE NA 3046.000 0.000 NA   NA
 11637827 5761083   SPCG_1748     FALSE NA 3046.000 0.000 NA   NA
 11780219 5761083   SPCG_1748     FALSE NA 3046.000 0.000 NA   NA
 11495465 5761083   SPCG_1748     FALSE NA 3075.000 0.000 NA   NA
 11637828 5761083   SPCG_1748     FALSE NA 3075.000 0.000 NA   NA
 11780220 5761083   SPCG_1748     FALSE NA 3075.000 0.000 NA   NA
 11495466 5761083   SPCG_1748     FALSE NA 3112.000 0.000 NA   NA
 11637829 5761083   SPCG_1748     FALSE NA 3112.000 0.000 NA   NA
 11780221 5761083   SPCG_1748     FALSE NA 3112.000 0.000 NA   NA
 11495467 5761083   SPCG_1748     FALSE NA 3141.000 0.000 NA   NA
 11637830 5761083   SPCG_1748     FALSE NA 3141.000 0.000 NA   NA
 11780222 5761083   SPCG_1748     FALSE NA 3141.000 0.000 NA   NA
 11495468 5761083   SPCG_1748     FALSE NA 3160.000 0.000 NA   NA
 11637831 5761083   SPCG_1748     FALSE NA 3160.000 0.000 NA   NA
 11780223 5761083   SPCG_1748     FALSE NA 3160.000 0.000 NA   NA
 11495469 5761083   SPCG_1748     FALSE NA 3189.000 0.000 NA   NA
 11637832 5761083   SPCG_1748     FALSE NA 3189.000 0.000 NA   NA
 11780224 5761083   SPCG_1748     FALSE NA 3189.000 0.000 NA   NA
 11495470 5761083   SPCG_1748     FALSE NA 3208.000 0.000 NA   NA
 11637833 5761083   SPCG_1748     FALSE NA 3208.000 0.000 NA   NA
 11780225 5761083   SPCG_1748     FALSE NA 3208.000 0.000 NA   NA
 11495471 5761083   SPCG_1748     FALSE NA 3237.000 0.000 NA   NA
 11637834 5761083   SPCG_1748     FALSE NA 3237.000 0.000 NA   NA
 11780226 5761083   SPCG_1748     FALSE NA 3237.000 0.000 NA   NA
 11495472 5761083   SPCG_1748     FALSE NA 3256.000 0.000 NA   NA
 11637835 5761083   SPCG_1748     FALSE NA 3256.000 0.000 NA   NA
 11780227 5761083   SPCG_1748     FALSE NA 3256.000 0.000 NA   NA
 11495473 5761083   SPCG_1748     FALSE NA 3285.000 0.000 NA   NA
 11637836 5761083   SPCG_1748     FALSE NA 3285.000 0.000 NA   NA
 11780228 5761083   SPCG_1748     FALSE NA 3285.000 0.000 NA   NA
 11495474 5761083   SPCG_1748     FALSE NA 3304.000 0.000 NA   NA
 11637837 5761083   SPCG_1748     FALSE NA 3304.000 0.000 NA   NA
 11780229 5761083   SPCG_1748     FALSE NA 3304.000 0.000 NA   NA
 11495475 5761083   SPCG_1748     FALSE NA 3333.000 0.000 NA   NA
 11637838 5761083   SPCG_1748     FALSE NA 3333.000 0.000 NA   NA
 11780230 5761083   SPCG_1748     FALSE NA 3333.000 0.000 NA   NA
 11495476 5761083   SPCG_1748     FALSE NA 3352.000 0.000 NA   NA
 11637839 5761083   SPCG_1748     FALSE NA 3352.000 0.000 NA   NA
 11780231 5761083   SPCG_1748     FALSE NA 3352.000 0.000 NA   NA
 11495477 5761083   SPCG_1748     FALSE NA 3381.000 0.000 NA   NA
 11637840 5761083   SPCG_1748     FALSE NA 3381.000 0.000 NA   NA
 11780232 5761083   SPCG_1748     FALSE NA 3381.000 0.000 NA   NA
 11495478 5761083   SPCG_1748     FALSE NA 3400.000 0.000 NA   NA
 11637841 5761083   SPCG_1748     FALSE NA 3400.000 0.000 NA   NA
 11780233 5761083   SPCG_1748     FALSE NA 3400.000 0.000 NA   NA
 11495479 5761083   SPCG_1748     FALSE NA 3429.000 0.000 NA   NA
 11637842