MicrobesOnline Operon Predictions for Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 5676734 5676735 SPC_0001 SPC_0002 thrL thrA FALSE 0.248 82.000 0.043 1.000   NA
 5676735 5676736 SPC_0002 SPC_0003 thrA thrB TRUE 0.992 2.000 0.133 1.000 Y NA
 5676736 5676737 SPC_0003 SPC_0004 thrB thrC TRUE 0.993 4.000 0.233 1.000 Y NA
 5676738 5676739 SPC_0005 SPC_0006 yaaA yaaJ FALSE 0.145 79.000 0.028 NA   NA
 5676740 5676741 SPC_0007 SPC_0008 talB mogA FALSE 0.112 111.000 0.042 1.000 N NA
 5676742 5676743 SPC_0009 SPC_0010 yaaH htgA FALSE 0.122 150.000 0.000 NA   NA
 5676743 5676744 SPC_0010 SPC_0011 htgA yaaI FALSE 0.442 36.000 0.000 NA   NA
 5676745 5676746 SPC_0012 SPC_0013   dnaK FALSE 0.172 117.000 0.000 NA   NA
 5676746 5676747 SPC_0013 SPC_0014 dnaK dnaJ TRUE 0.937 86.000 0.236 0.003 Y NA
 5676747 5676748 SPC_0014 SPC_0015 dnaJ   FALSE 0.178 111.000 0.000 NA   NA
 5676748 5676749 SPC_0015 SPC_0016     FALSE 0.325 56.000 0.000 NA   NA
 5676749 5676750 SPC_0016 SPC_0017     TRUE 0.714 127.000 0.600 NA   NA
 5676751 5676752 SPC_0018 SPC_0019     TRUE 0.948 17.000 0.600 NA   NA
 5676753 5676754 SPC_0020 SPC_0021     FALSE 0.205 92.000 0.000 NA   NA
 5676754 5676755 SPC_0021 SPC_0022     FALSE 0.014 281.000 0.000 NA   NA
 5676755 5676756 SPC_0022 SPC_0023   bcfA FALSE 0.002 430.000 0.000 NA N NA
 5676756 5676757 SPC_0023 SPC_0024 bcfA bcfB TRUE 0.976 29.000 0.500 1.000 Y NA
 5676757 5676758 SPC_0024 SPC_0025 bcfB bcfC TRUE 0.845 5.000 0.000 NA   NA
 5676758 5676759 SPC_0025 SPC_0026 bcfC bcfD TRUE 0.898 1.000 0.000 NA   NA
 5676759 5676760 SPC_0026 SPC_0027 bcfD bcfE TRUE 0.985 40.000 0.500 0.012 Y NA
 5676760 5676761 SPC_0027 SPC_0028 bcfE bcfF TRUE 0.995 16.000 0.667 0.012 Y NA
 5676761 5676762 SPC_0028 SPC_0029 bcfF bcfG TRUE 0.974 32.000 0.500 1.000 Y NA
 5676762 5676763 SPC_0029 SPC_0030 bcfG bcfH TRUE 0.732 64.000 0.167 0.017 N NA
 5676763 5676764 SPC_0030 SPC_0031 bcfH   FALSE 0.367 48.000 0.000 NA   NA
 5676766 5676767 SPC_0033 SPC_0034     TRUE 0.515 25.000 0.000 NA   NA
 5676769 5676770 SPC_0036 SPC_0037     TRUE 0.546 21.000 0.000 NA   NA
 5676770 5676771 SPC_0037 SPC_0038   aslB FALSE 0.165 128.000 0.000 NA   NA
 5676771 5676772 SPC_0038 SPC_0039 aslB   FALSE 0.021 528.000 0.400 NA   NA
 5676772 5676773 SPC_0039 SPC_0040     FALSE 0.046 200.000 0.000 NA   NA
 5676773 5676774 SPC_0040 SPC_0041   nhaA FALSE 0.095 163.000 0.000 NA   NA
 5676774 5676775 SPC_0041 SPC_0042 nhaA nhaR TRUE 0.651 68.000 0.292 1.000 N NA
 5676776 5676777 SPC_0043 SPC_0044     TRUE 0.958 25.000 0.231 1.000 Y NA
 5676777 5676778 SPC_0044 SPC_0045   rpsT FALSE 0.003 456.000 0.000 1.000 N NA
 5676779 5676780 SPC_0046 SPC_0047 yaaY ribF TRUE 0.670 8.000 0.019 NA   NA
 5676780 5676781 SPC_0047 SPC_0048 ribF ileS TRUE 0.948 9.000 0.254 1.000 N NA
 5676781 5676782 SPC_0048 SPC_0049 ileS lspA TRUE 0.867 0.000 0.045 1.000 N NA
 5676782 5676783 SPC_0049 SPC_0050 lspA   TRUE 0.661 14.000 0.000 NA   NA
 5676783 5676784 SPC_0050 SPC_0051   fkpB TRUE 0.785 10.000 0.000 NA   NA
 5676784 5676785 SPC_0051 SPC_0052 fkpB lytB TRUE 0.989 3.000 0.626 1.000 N NA
 5676787 5676788 SPC_0054 SPC_0055   yaaF TRUE 0.610 16.000 0.000 NA   NA
 5676789 5676790 SPC_0056 SPC_0057 citB citA TRUE 0.999 2.000 1.000 1.000 Y NA
 5676790 5676791 SPC_0057 SPC_0058 citA oadB FALSE 0.206 96.000 0.068 1.000 N NA
 5676791 5676792 SPC_0058 SPC_0059 oadB oadA TRUE 0.997 16.000 0.886 0.003 Y NA
 5676792 5676793 SPC_0059 SPC_0060 oadA oadG TRUE 0.996 16.000 0.720 0.003 Y NA
 5676793 5676794 SPC_0060 SPC_0061 oadG citC TRUE 0.513 159.000 0.060 1.000 Y NA
 5676795 5676796 SPC_0062 SPC_0063 citC2 citD2 TRUE 0.971 30.000 0.426 1.000 Y NA
 5676796 5676797 SPC_0063 SPC_0064 citD2 citE2 TRUE 0.980 15.000 0.537 0.002 N NA
 5676797 5676798 SPC_0064 SPC_0065 citE2 citF2 TRUE 0.983 11.000 0.373 0.002 N NA
 5676798 5676799 SPC_0065 SPC_0066 citF2 citX2 TRUE 0.976 0.000 0.231 1.000 N NA
 5676799 5676800 SPC_0066 SPC_0067 citX2 citG TRUE 0.997 -49.000 0.400 1.000 Y NA
 5676800 5676801 SPC_0067 SPC_0068 citG dapB FALSE 0.017 180.000 0.002 1.000 N NA
 5676802 5676803 SPC_0069 SPC_0070     FALSE 0.004 424.000 0.000 NA   NA
 5676804 5676805 SPC_0071 SPC_0072 carA carB TRUE 0.991 19.000 0.345 0.001 Y NA
 5676805 5676806 SPC_0072 SPC_0073 carB caiF FALSE 0.016 274.000 0.000 NA   NA
 5676807 5676808 SPC_0074 SPC_0075 caiE caiD FALSE 0.270 110.000 0.069 1.000   NA
 5676808 5676809 SPC_0075 SPC_0076 caiD caiC TRUE 0.905 54.000 0.000 0.023 Y NA
 5676809 5676810 SPC_0076 SPC_0077 caiC caiB TRUE 0.723 63.000 0.154 0.023 N NA
 5676810 5676811 SPC_0077 SPC_0078 caiB caiA TRUE 0.823 58.000 0.529 1.000 N NA
 5676811 5676812 SPC_0078 SPC_0079 caiA caiT FALSE 0.403 35.000 0.000 1.000 N NA
 5676813 5676814 SPC_0080 SPC_0081   fixA TRUE 0.601 50.000 0.154 NA   NA
 5676814 5676815 SPC_0081 SPC_0082 fixA fixB TRUE 0.968 16.000 0.000 0.015 Y NA
 5676815 5676816 SPC_0082 SPC_0083 fixB fixC TRUE 0.905 50.000 0.000 0.056 Y NA
 5676816 5676817 SPC_0083 SPC_0084 fixC fixX TRUE 0.982 15.000 0.167 0.056 Y NA
 5676817 5676818 SPC_0084 SPC_0085 fixX yaaU FALSE 0.198 81.000 0.000 1.000 N NA
 5676818 5676819 SPC_0085 SPC_0086 yaaU   FALSE 0.325 56.000 0.000 NA   NA
 5676819 5676820 SPC_0086 SPC_0087     FALSE 0.013 286.000 0.000 NA   NA
 5676821 5676822 SPC_0088 SPC_0089     FALSE 0.278 65.000 0.000 NA   NA
 5676823 5676824 SPC_0090 SPC_0091     FALSE 0.003 494.000 0.000 NA   NA
 5676824 5676825 SPC_0091 SPC_0092   yabF FALSE 0.004 554.000 0.000 1.000   NA
 5676825 5676826 SPC_0092 SPC_0093 yabF kefC TRUE 0.994 -7.000 0.560 1.000   NA
 5676826 5676827 SPC_0093 SPC_0094 kefC folA FALSE 0.014 199.000 0.012 1.000 N NA
 5676828 5676829 SPC_0095 SPC_0096 apaH apaG TRUE 0.918 11.000 0.267 NA N NA
 5676829 5676830 SPC_0096 SPC_0097 apaG ksgA TRUE 0.494 21.000 0.078 NA N NA
 5676830 5676831 SPC_0097 SPC_0098 ksgA pdxA TRUE 0.976 -3.000 0.197 1.000 N NA
 5676831 5676832 SPC_0098 SPC_0099 pdxA surA TRUE 0.991 0.000 0.561 1.000 N NA
 5676832 5676833 SPC_0099 SPC_0100 surA imp TRUE 0.598 54.000 0.182 1.000 N NA
 5676833 5676834 SPC_0100 SPC_0101 imp   TRUE 0.785 10.000 0.000 NA   NA
 5676836 5676837 SPC_0103 SPC_0104 rluA hepA TRUE 0.926 12.000 0.294 1.000 N NA
 5676837 5676838 SPC_0104 SPC_0105 hepA polB TRUE 0.650 174.000 0.098 0.067 Y NA
 5676838 5676839 SPC_0105 SPC_0106 polB   FALSE 0.391 44.000 0.000 NA   NA
 5676841 5676842 SPC_0108 SPC_0109 araD araA FALSE 0.254 72.000 0.000 NA   NA
 5676842 5676843 SPC_0109 SPC_0110 araA araB FALSE 0.143 141.000 0.000 NA   NA
 5676844 5676845 SPC_0111 SPC_0112 araC yabI FALSE 0.379 119.000 0.167 NA   NA
 5676846 5676847 SPC_0113 SPC_0114 yabJ thiP TRUE 0.995 -16.000 0.522 0.017 N NA
 5676847 5676848 SPC_0114 SPC_0115 thiP tbpA TRUE 0.996 -24.000 0.697 0.069 N NA
 5676848 5676849 SPC_0115 SPC_0116 tbpA yabN FALSE 0.225 178.000 0.000 0.069   NA
 5676849 5676850 SPC_0116 SPC_0117 yabN   FALSE 0.006 356.000 0.000 NA   NA
 5676852 5676853 SPC_0119 SPC_0120 leuD leuC TRUE 0.996 11.000 0.309 0.001 Y NA
 5676853 5676854 SPC_0120 SPC_0121 leuC leuB TRUE 0.998 3.000 0.275 0.002 Y NA
 5676854 5676855 SPC_0121 SPC_0122 leuB leuA TRUE 0.997 0.000 0.126 0.002 Y NA
 5676855 5676856 SPC_0122 SPC_0123 leuA leuL TRUE 0.547 88.000 0.010 0.002   NA
 5676857 5676858 SPC_0124 SPC_0125 leuO ilvI FALSE 0.008 322.000 0.000 1.000 N NA
 5676858 5676859 SPC_0125 SPC_0126 ilvI ilvH TRUE 0.999 -27.000 0.371 0.002 Y NA
 5676859 5676860 SPC_0126 SPC_0127 ilvH fruR FALSE 0.013 284.000 0.063 1.000 N NA
 5676860 5676861 SPC_0127 SPC_0128 fruR yabB FALSE 0.002 606.000 0.000 NA   NA
 5676861 5676862 SPC_0128 SPC_0129 yabB mraW TRUE 0.991 2.000 0.635 NA   NA
 5676862 5676863 SPC_0129 SPC_0130 mraW ftsL TRUE 0.980 -3.000 0.227 1.000 N NA
 5676863 5676864 SPC_0130 SPC_0131 ftsL ftsI TRUE 0.759 16.000 0.124 1.000 N NA
 5676864 5676865 SPC_0131 SPC_0132 ftsI murE TRUE 0.804 59.000 0.059 1.000 Y NA
 5676865 5676866 SPC_0132 SPC_0133 murE murF TRUE 0.999 -3.000 0.569 0.002 Y NA
 5676866 5676867 SPC_0133 SPC_0134 murF mraY TRUE 0.999 -6.000 0.309 0.005 Y NA
 5676867 5676868 SPC_0134 SPC_0135 mraY murD TRUE 0.999 3.000 0.647 0.005 Y NA
 5676868 5676869 SPC_0135 SPC_0136 murD ftsW TRUE 0.935 27.000 0.297 0.003 N NA
 5676869 5676870 SPC_0136 SPC_0137 ftsW murG TRUE 0.940 21.000 0.647 1.000 N NA
 5676870 5676871 SPC_0137 SPC_0138 murG murC TRUE 0.838 119.000 0.283 1.000 Y NA
 5676871 5676872 SPC_0138 SPC_0139 murC ddl TRUE 0.998 -7.000 0.153 0.005 Y NA
 5676872 5676873 SPC_0139 SPC_0140 ddl ftsQ TRUE 0.996 2.000 0.372 NA Y NA
 5676873 5676874 SPC_0140 SPC_0141 ftsQ ftsA TRUE 0.987 -3.000 0.389 NA N NA
 5676874 5676875 SPC_0141 SPC_0142 ftsA ftsZ TRUE 0.944 61.000 0.460 1.000 Y NA
 5676875 5676876 SPC_0142 SPC_0143 ftsZ lpxC FALSE 0.344 101.000 0.134 1.000 N NA
 5676876 5676877 SPC_0143 SPC_0144 lpxC yacA FALSE 0.010 348.000 0.000 1.000   NA
 5676877 5676878 SPC_0144 SPC_0145 yacA secA FALSE 0.398 62.000 0.065 1.000   NA
 5676878 5676879 SPC_0145 SPC_0146 secA mutT FALSE 0.268 152.000 0.168 1.000 N NA
 5676882 5676883 SPC_0149 SPC_0150 yacG yacF TRUE 0.962 10.000 0.356 NA   NA
 5676883 5676884 SPC_0150 SPC_0151 yacF   FALSE 0.421 69.000 0.110 NA   NA
 5676886 5676887 SPC_0153 SPC_0154 hofC hofB TRUE 0.998 -10.000 0.571 1.000 Y NA
 5676887 5676888 SPC_0154 SPC_0155 hofB ppdD TRUE 0.994 10.000 0.556 1.000 Y NA
 5676888 5676889 SPC_0155 SPC_0156 ppdD nadC FALSE 0.009 222.000 0.015 1.000 N NA
 5676890 5676891 SPC_0157 SPC_0158 ampD ampE TRUE 0.997 -3.000 0.249 1.000 Y NA
 5676892 5676893 SPC_0159 SPC_0160     TRUE 0.987 0.000 0.333 1.000   NA
 5676893 5676894 SPC_0160 SPC_0161     FALSE 0.171 198.000 0.238 1.000 N NA
 5676895 5676896 SPC_0162 SPC_0163 pdhR aceE FALSE 0.342 160.000 0.276 1.000 N NA
 5676896 5676897 SPC_0163 SPC_0164 aceE aceF TRUE 0.973 15.000 0.220 1.000 Y NA
 5676897 5676898 SPC_0164 SPC_0165 aceF lpdA FALSE 0.047 199.000 0.000 NA   NA
 5676898 5676899 SPC_0165 SPC_0166 lpdA   FALSE 0.213 87.000 0.000 NA   NA
 5676899 5676900 SPC_0166 SPC_0167     FALSE 0.225 83.000 0.000 NA   NA
 5676901 5676902 SPC_0168 SPC_0169   yacH TRUE 0.751 70.000 0.429 NA   NA
 5676904 5676905 SPC_0171 SPC_0172     FALSE 0.004 410.000 0.000 NA   NA
 5676906 5676907 SPC_0173 SPC_0174   kdgT FALSE 0.026 235.000 0.000 NA   NA
 5676907 5676908 SPC_0174 SPC_0175 kdgT   TRUE 0.928 -3.000 0.000 NA   NA
 5676908 5676909 SPC_0175 SPC_0176     TRUE 0.988 -10.000 0.361 NA   NA
 5676909 5676910 SPC_0176 SPC_0177     TRUE 0.974 10.000 0.533 1.000 N NA
 5676911 5676912 SPC_0178 SPC_0179 speD speE TRUE 0.951 21.000 0.162 1.000 Y NA
 5676912 5676913 SPC_0179 SPC_0180 speE yacC TRUE 0.611 107.000 0.354 NA   NA
 5676918 5676919 SPC_0185 SPC_0186 yadG yadH TRUE 0.999 -3.000 0.688 0.099 Y NA
 5676920 5676921 SPC_0187 SPC_0188 stiH stiC TRUE 0.974 9.000 0.000 1.000 Y NA
 5676921 5676922 SPC_0188 SPC_0189 stiC stiB TRUE 0.756 72.000 0.000 1.000 Y NA
 5676922 5676923 SPC_0189 SPC_0190 stiB stiA TRUE 0.841 48.000 0.000 1.000 Y NA
 5676923 5676924 SPC_0190 SPC_0191 stiA   FALSE 0.035 215.000 0.000 NA   NA
 5676925 5676926 SPC_0192 SPC_0193 yadI yadE TRUE 0.886 68.000 0.222 1.000 Y NA
 5676927 5676928 SPC_0194 SPC_0195 panD panC TRUE 0.884 95.000 0.342 1.000 Y NA
 5676928 5676929 SPC_0195 SPC_0196 panC panB TRUE 0.949 126.000 0.395 0.001 Y NA
 5676929 5676930 SPC_0196 SPC_0197 panB folK TRUE 0.731 121.000 0.117 1.000 Y NA
 5676930 5676931 SPC_0197 SPC_0198 folK pcnB TRUE 0.981 -3.000 0.234 1.000 N NA
 5676931 5676932 SPC_0198 SPC_0199 pcnB yadB TRUE 0.706 141.000 0.131 1.000 Y NA
 5676932 5676933 SPC_0199 SPC_0200 yadB dksA TRUE 0.815 24.000 0.231 1.000 N NA
 5676933 5676934 SPC_0200 SPC_0201 dksA sfsA FALSE 0.177 177.000 0.151 NA   NA
 5676934 5676935 SPC_0201 SPC_0202 sfsA ligT TRUE 0.698 11.000 0.045 NA   NA
 5676936 5676937 SPC_0203 SPC_0204 hrpB mrcB FALSE 0.299 141.000 0.158 1.000 N NA
 5676939 5676940 SPC_0206 SPC_0207 fhuA fhuC TRUE 0.900 49.000 0.156 1.000 Y NA
 5676940 5676941 SPC_0207 SPC_0208 fhuC fhuD TRUE 0.989 0.000 0.047 1.000 Y NA
 5676941 5676942 SPC_0208 SPC_0209 fhuD fhuB TRUE 0.993 -3.000 0.087 1.000 Y NA
 5676942 5676943 SPC_0209 SPC_0210 fhuB   FALSE 0.436 37.000 0.000 NA   NA
 5676943 5676944 SPC_0210 SPC_0211   stfA FALSE 0.002 696.000 0.000 NA   NA
 5676944 5676945 SPC_0211 SPC_0212 stfA stfC TRUE 0.959 86.000 1.000 1.000 Y NA
 5676945 5676946 SPC_0212 SPC_0213 stfC stfD TRUE 0.578 18.000 0.000 NA   NA
 5676946 5676947 SPC_0213 SPC_0214 stfD stfE FALSE 0.284 64.000 0.000 NA   NA
 5676947 5676948 SPC_0214 SPC_0215 stfE stfF TRUE 0.999 -3.000 0.571 0.012 Y NA
 5676948 5676949 SPC_0215 SPC_0216 stfF stfG TRUE 0.995 0.000 0.000 0.012 Y NA
 5676949 5676950 SPC_0216 SPC_0217 stfG   TRUE 0.911 0.000 0.000 NA   NA
 5676952 5676953 SPC_0219 SPC_0220 yadQ yadR FALSE 0.172 70.000 0.031 NA   NA
 5676954 5676955 SPC_0221 SPC_0222 yadS btuF TRUE 0.750 37.000 0.213 NA   NA
 5676955 5676956 SPC_0222 SPC_0223 btuF mtn TRUE 0.859 5.000 0.073 1.000 N NA
 5676957 5676958 SPC_0224 SPC_0225 dgt htrA FALSE 0.243 130.000 0.101 1.000 N NA
 5676958 5676959 SPC_0225 SPC_0226 htrA yaeG FALSE 0.142 129.000 0.080 NA N NA
 5676962 5676963 SPC_0229 SPC_0230 dapD glnD TRUE 0.591 30.000 0.097 1.000 N NA
 5676963 5676964 SPC_0230 SPC_0231 glnD map TRUE 0.495 104.000 0.243 1.000 N NA
 5676965 5676966 SPC_0232 SPC_0233 rpsB tsf TRUE 0.716 213.000 0.748 1.000 Y NA
 5676966 5676967 SPC_0233 SPC_0234 tsf pyrH TRUE 0.540 145.000 0.416 1.000 N NA
 5676967 5676968 SPC_0234 SPC_0235 pyrH frr TRUE 0.649 147.000 0.626 1.000 N NA
 5676968 5676969 SPC_0235 SPC_0236 frr dxr FALSE 0.190 52.000 0.032 1.000 N NA
 5676969 5676970 SPC_0236 SPC_0237 dxr uppS FALSE 0.068 313.000 0.025 1.000 Y NA
 5676970 5676971 SPC_0237 SPC_0238 uppS cdsA TRUE 0.987 13.000 0.400 1.000 Y NA
 5676971 5676972 SPC_0238 SPC_0239 cdsA yaeL TRUE 0.749 12.000 0.080 1.000 N NA
 5676972 5676973 SPC_0239 SPC_0240 yaeL yaeT TRUE 0.944 32.000 0.204 1.000 Y NA
 5676973 5676974 SPC_0240 SPC_0241 yaeT ompH TRUE 0.864 123.000 0.354 1.000 Y NA
 5676974 5676975 SPC_0241 SPC_0242 ompH lpxD TRUE 0.998 4.000 0.814 1.000 Y NA
 5676975 5676976 SPC_0242 SPC_0243 lpxD fabZ TRUE 0.789 106.000 0.796 1.000 N NA
 5676976 5676977 SPC_0243 SPC_0244 fabZ lpxA TRUE 0.991 4.000 0.850 1.000 N NA
 5676977 5676978 SPC_0244 SPC_0245 lpxA lpxB TRUE 0.996 0.000 0.289 1.000 Y NA
 5676978 5676979 SPC_0245 SPC_0246 lpxB rnhB TRUE 0.975 -3.000 0.186 1.000 N NA
 5676979 5676980 SPC_0246 SPC_0247 rnhB dnaE TRUE 0.810 72.000 0.104 1.000 Y NA
 5676980 5676981 SPC_0247 SPC_0248 dnaE accA TRUE 0.809 13.000 0.122 1.000 N NA
 5676981 5676982 SPC_0248 SPC_0249 accA   FALSE 0.047 181.000 0.003 1.000   NA
 5676982 5676983 SPC_0249 SPC_0250   ldcC FALSE 0.466 76.000 0.118 1.000   NA
 5676983 5676984 SPC_0250 SPC_0251 ldcC yaeR TRUE 0.763 56.000 0.039 NA Y NA
 5676984 5676985 SPC_0251 SPC_0252 yaeR mesJ FALSE 0.289 63.000 0.000 NA   NA
 5676986 5676987 SPC_0253 SPC_0254   yaeP TRUE 0.622 53.000 0.179 NA   NA
 5676988 5676989 SPC_0255 SPC_0256 yaeQ yaeJ TRUE 0.926 -3.000 0.034 1.000   NA
 5676989 5676990 SPC_0256 SPC_0257 yaeJ cutF FALSE 0.321 32.000 0.027 NA   NA
 5676991 5676992 SPC_0258 SPC_0259 proS yaeB FALSE 0.155 111.000 0.048 NA   NA
 5676992 5676993 SPC_0259 SPC_0260 yaeB rcsF TRUE 0.983 -3.000 0.247 NA   NA
 5676993 5676994 SPC_0260 SPC_0261 rcsF yaeC TRUE 0.676 119.000 0.500 NA   NA
 5676994 5676995 SPC_0261 SPC_0262 yaeC yaeE TRUE 0.958 39.000 0.411 NA Y NA
 5676995 5676996 SPC_0262 SPC_0263 yaeE abc TRUE 0.996 8.000 0.584 1.000 Y NA
 5676997 5676998 SPC_0264 SPC_r001 yaeD   FALSE 0.006 374.000 0.000 NA   NA
 5676998 5676999 SPC_r001 SPC_t001     FALSE 0.261 70.000 0.000 NA   NA
 5676999 5677000 SPC_t001 SPC_t002     FALSE 0.181 110.000 0.000 NA   NA
 5677000 5677001 SPC_t002 SPC_r002     FALSE 0.067 181.000 0.000 NA   NA
 5677001 5677002 SPC_r002 SPC_r003     FALSE 0.205 92.000 0.000 NA   NA
 5677002 5677003 SPC_r003 SPC_t003     FALSE 0.055 190.000 0.000 NA   NA
 5677003 5677004 SPC_t003 SPC_0265   yafB FALSE 0.091 165.000 0.000 NA   NA
 5677006 5677007 SPC_0267 SPC_0268   yafD FALSE 0.098 132.000 0.029 NA   NA
 5677007 5677008 SPC_0268 SPC_0269 yafD yafE FALSE 0.266 78.000 0.066 NA   NA
 5677009 5677010 SPC_0270 SPC_0271 mltD gloB TRUE 0.642 72.000 0.233 1.000   NA
 5677013 5677014 SPC_0274 SPC_t004 dnaQ   FALSE 0.158 134.000 0.000 NA   NA
 5677015 5677016 SPC_0275 SPC_0276     TRUE 0.747 11.000 0.000 NA   NA
 5677016 5677017 SPC_0276 SPC_0277     TRUE 0.928 -3.000 0.000 NA   NA
 5677017 5677018 SPC_0277 SPC_0278     TRUE 0.610 16.000 0.000 NA   NA
 5677018 5677019 SPC_0278 SPC_0279     TRUE 0.928 -3.000 0.000 NA   NA
 5677019 5677020 SPC_0279 SPC_0280     TRUE 0.916 -13.000 0.000 NA   NA
 5677020 5677021 SPC_0280 SPC_0281     TRUE 0.546 21.000 0.000 NA   NA
 5677022 5677023 SPC_0282 SPC_0283     FALSE 0.195 100.000 0.000 NA   NA
 5677023 5677024 SPC_0283 SPC_0284     TRUE 0.524 24.000 0.000 NA   NA
 5677024 5677025 SPC_0284 SPC_0285     FALSE 0.016 274.000 0.000 NA   NA
 5677025 5677026 SPC_0285 SPC_0286     FALSE 0.072 178.000 0.000 NA   NA
 5677026 5677027 SPC_0286 SPC_0287     FALSE 0.020 252.000 0.000 NA   NA
 5677027 5677028 SPC_0287 SPC_0288     TRUE 0.723 112.000 0.583 NA   NA
 5677028 5677029 SPC_0288 SPC_0289     TRUE 0.862 4.000 0.000 NA   NA
 5677029 5677030 SPC_0289 SPC_0290     TRUE 0.928 -3.000 0.000 NA   NA
 5677030 5677031 SPC_0290 SPC_0291     TRUE 0.845 5.000 0.000 NA   NA
 5677031 5677032 SPC_0291 SPC_0292     FALSE 0.004 412.000 0.000 NA   NA
 5677032 5677033 SPC_0292 SPC_0293     FALSE 0.455 33.000 0.000 NA   NA
 5677033 5677034 SPC_0293 SPC_0294     FALSE 0.455 33.000 0.000 NA   NA
 5677034 5677035 SPC_0294 SPC_0295     TRUE 0.928 -3.000 0.000 NA   NA
 5677035 5677036 SPC_0295 SPC_0296     TRUE 0.918 24.000 0.500 NA   NA
 5677036 5677037 SPC_0296 SPC_0297     FALSE 0.143 141.000 0.000 NA   NA
 5677037 5677038 SPC_0297 SPC_0298     FALSE 0.379 46.000 0.000 NA   NA
 5677038 5677039 SPC_0298 SPC_0299     FALSE 0.301 60.000 0.000 NA   NA
 5677039 5677040 SPC_0299 SPC_0300   rhs TRUE 0.952 16.000 0.600 NA   NA
 5677040 5677041 SPC_0300 SPC_0301 rhs   TRUE 0.565 19.000 0.000 NA   NA
 5677043 5677044 SPC_0303 SPC_0304     FALSE 0.002 709.000 0.000 NA   NA
 5677044 5677045 SPC_0304 SPC_0305     FALSE 0.009 318.000 0.000 NA   NA
 5677047 5677048 SPC_0307 SPC_0308     FALSE 0.102 226.000 0.000 0.065   NA
 5677048 5677049 SPC_0308 SPC_0309   safA FALSE 0.002 750.000 0.000 NA   NA
 5677049 5677050 SPC_0309 SPC_0310 safA safB TRUE 0.524 24.000 0.000 NA   NA
 5677050 5677051 SPC_0310 SPC_0311 safB safC TRUE 0.524 24.000 0.000 NA   NA
 5677051 5677052 SPC_0311 SPC_0312 safC safD TRUE 0.538 22.000 0.000 NA   NA
 5677052 5677053 SPC_0312 SPC_0313 safD   FALSE 0.011 336.000 0.000 1.000   NA
 5677053 5677054 SPC_0313 SPC_0314     FALSE 0.003 483.000 0.000 NA   NA
 5677054 5677055 SPC_0314 SPC_0315   sinR FALSE 0.043 203.000 0.000 NA   NA
 5677055 5677056 SPC_0315 SPC_0316 sinR   FALSE 0.170 120.000 0.000 NA   NA
 5677057 5677058 SPC_0317 SPC_0318     FALSE 0.004 346.000 0.000 NA N NA
 5677058 5677059 SPC_0318 SPC_0319   yafV FALSE 0.010 310.000 0.000 NA   NA
 5677059 5677060 SPC_0319 SPC_0320 yafV fadE FALSE 0.166 118.000 0.033 1.000   NA
 5677061 5677062 SPC_0321 SPC_0322 ghmA yafJ FALSE 0.163 213.000 0.229 1.000   NA
 5677064 5677065 SPC_0324 SPC_0325 dinP   FALSE 0.041 207.000 0.000 NA   NA
 5677065 5677066 SPC_0325 SPC_0326   prfH TRUE 0.986 -3.000 0.303 NA   NA
 5677068 5677069 SPC_0328 SPC_0329 gpt yafA FALSE 0.116 89.000 0.000 NA N NA
 5677069 5677070 SPC_0329 SPC_0330 yafA crl FALSE 0.312 58.000 0.000 NA   NA
 5677071 5677072 SPC_0331 SPC_0332 phoE   TRUE 0.919 8.000 0.143 NA   NA
 5677073 5677074 SPC_0333 SPC_0334 proB proA TRUE 0.982 12.000 0.026 0.001 Y NA
 5677074 5677075 SPC_0334 SPC_t005 proA   FALSE 0.173 116.000 0.000 NA   NA
 5677077 5677078 SPC_0336 SPC_0338     FALSE 0.042 206.000 0.000 NA   NA
 5677078 5677079 SPC_0338 SPC_0339     FALSE 0.007 347.000 0.000 NA   NA
 5677079 5677080 SPC_0339 SPC_0340     FALSE 0.138 132.000 0.000 1.000 N NA
 5677080 5677081 SPC_0340 SPC_0341     TRUE 0.997 2.000 0.116 0.001 Y NA
 5677081 5677082 SPC_0341 SPC_0342     TRUE 0.595 15.000 0.000 1.000 N NA
 5677082 5677083 SPC_0342 SPC_0343     TRUE 0.911 0.000 0.000 NA   NA
 5677083 5677084 SPC_0343 SPC_0344     FALSE 0.087 167.000 0.000 NA   NA
 5677087 5677088 SPC_0347 SPC_0348 stbE stbD TRUE 0.615 23.000 0.000 1.000   NA
 5677088 5677089 SPC_0348 SPC_0349 stbD stbC TRUE 0.570 29.000 0.000 1.000   NA
 5677089 5677090 SPC_0349 SPC_0350 stbC stbB TRUE 0.999 -16.000 1.000 1.000 Y NA
 5677090 5677091 SPC_0350 SPC_0351 stbB stbA TRUE 0.933 62.000 0.385 1.000 Y NA
 5677092 5677093 SPC_0352 SPC_0353     TRUE 0.995 -27.000 1.000 NA   NA
 5677093 5677094 SPC_0353 SPC_0354     FALSE 0.011 300.000 0.000 NA   NA
 5677094 5677095 SPC_0354 SPC_0355     TRUE 0.486 64.000 0.182 NA N NA
 5677095 5677096 SPC_0355 SPC_0356     TRUE 0.995 -27.000 1.000 NA   NA
 5677096 5677097 SPC_0356 SPC_0357     FALSE 0.005 401.000 0.000 NA   NA
 5677097 5677098 SPC_0357 SPC_0358     FALSE 0.137 144.000 0.000 NA   NA
 5677098 5677099 SPC_0358 SPC_0359     FALSE 0.325 56.000 0.000 NA   NA
 5677099 5677100 SPC_0359 SPC_0360     FALSE 0.312 58.000 0.000 NA   NA
 5677101 5677102 SPC_0361 SPC_0362     TRUE 0.964 17.000 0.500 0.052 N NA
 5677102 5677103 SPC_0362 SPC_0363     TRUE 0.974 -3.000 0.179 1.000 N NA
 5677104 5677105 SPC_0364 SPC_0365     TRUE 0.928 12.000 0.304 1.000 N NA
 5677105 5677106 SPC_0365 SPC_0366     TRUE 0.540 78.000 0.222 1.000 N NA
 5677106 5677107 SPC_0366 SPC_0367     FALSE 0.010 292.000 0.000 1.000 N NA
 5677107 5677108 SPC_0367 SPC_0368   mod FALSE 0.047 189.000 0.000 1.000 N NA
 5677108 5677109 SPC_0368 SPC_0369 mod res TRUE 0.940 7.000 0.076 0.065 N NA
 5677109 5677110 SPC_0369 SPC_0370 res   FALSE 0.002 495.000 0.000 1.000 N NA
 5677110 5677111 SPC_0370 SPC_0371     TRUE 0.999 -3.000 0.333 0.054 Y NA
 5677111 5677112 SPC_0371 SPC_0372     TRUE 0.592 17.000 0.000 NA   NA
 5677112 5677113 SPC_0372 SPC_0373     FALSE 0.200 96.000 0.000 NA   NA
 5677113 5677114 SPC_0373 SPC_0374   foxA FALSE 0.328 164.000 0.280 1.000 N NA
 5677118 5677119 SPC_0378 SPC_0379 prpB prpC TRUE 0.667 123.000 0.502 1.000 N NA
 5677119 5677120 SPC_0379 SPC_0380 prpC prpD TRUE 0.784 38.000 0.216 1.000   NA
 5677120 5677121 SPC_0380 SPC_0381 prpD prpE FALSE 0.412 41.000 0.000 NA   NA
 5677123 5677124 SPC_0383 SPC_0384   yaiV FALSE 0.129 80.000 0.000 NA N NA
 5677126 5677127 SPC_0386 SPC_0387 sbmA yaiW TRUE 0.675 15.000 0.045 1.000   NA
 5677131 5677132 SPC_0391 SPC_0392     FALSE 0.134 169.000 0.090 NA   NA
 5677132 5677133 SPC_0392 SPC_0393   yaiB FALSE 0.033 291.000 0.154 NA   NA
 5677133 5677134 SPC_0393 SPC_0394 yaiB psiF FALSE 0.007 348.000 0.000 NA   NA
 5677134 5677135 SPC_0394 SPC_0395 psiF adrA TRUE 0.545 92.000 0.250 NA   NA
 5677137 5677138 SPC_0397 SPC_0398 yaiI aroL FALSE 0.025 185.000 0.007 NA   NA
 5677138 5677139 SPC_0398 SPC_0399 aroL yaiA TRUE 0.500 27.000 0.000 NA   NA
 5677139 5677140 SPC_0399 SPC_0400 yaiA aroM FALSE 0.021 251.000 0.000 NA   NA
 5677140 5677141 SPC_0400 SPC_0401 aroM yaiE FALSE 0.227 71.000 0.049 NA   NA
 5677144 5677145 SPC_0404 SPC_0405 araJ sbcC FALSE 0.028 119.000 0.030 NA N NA
 5677145 5677146 SPC_0405 SPC_0406 sbcC sbcD TRUE 0.996 -3.000 0.021 0.001 Y NA
 5677146 5677147 SPC_0406 SPC_0407 sbcD   FALSE 0.404 42.000 0.000 NA   NA
 5677148 5677149 SPC_0408 SPC_0409 phoB phoR TRUE 0.965 70.000 0.453 0.017 Y NA
 5677149 5677150 SPC_0409 SPC_0410 phoR brnQ FALSE 0.004 409.000 0.000 1.000 N NA
 5677150 5677151 SPC_0410 SPC_0411 brnQ proY TRUE 0.972 15.000 0.087 0.091 Y NA
 5677151 5677152 SPC_0411 SPC_0412 proY malZ FALSE 0.175 162.000 0.123 1.000 N NA
 5677153 5677154 SPC_0413 SPC_0414   yajB FALSE 0.030 210.000 0.014 1.000   NA
 5677155 5677156 SPC_0415 SPC_0416 queA tgt TRUE 0.816 197.000 0.360 0.001 Y NA
 5677156 5677157 SPC_0416 SPC_0417 tgt yajC TRUE 0.843 23.000 0.325 NA N NA
 5677157 5677158 SPC_0417 SPC_0418 yajC secD TRUE 0.748 61.000 0.045 NA Y NA
 5677158 5677159 SPC_0418 SPC_0419 secD secF TRUE 0.994 11.000 0.206 0.001 Y NA
 5677159 5677160 SPC_0419 SPC_0420 secF   FALSE 0.062 145.000 0.015 NA   NA
 5677160 5677161 SPC_0420 SPC_0421     TRUE 0.902 26.000 0.452 NA   NA
 5677161 5677162 SPC_0421 SPC_0422   yajD FALSE 0.116 170.000 0.000 1.000   NA
 5677162 5677163 SPC_0422 SPC_0423 yajD   FALSE 0.005 394.000 0.000 NA   NA
 5677164 5677165 SPC_0424 SPC_0425 tsx yajI FALSE 0.011 300.000 0.000 NA   NA
 5677166 5677167 SPC_0426 SPC_0427     FALSE 0.385 45.000 0.000 NA   NA
 5677167 5677168 SPC_0427 SPC_0428   ribD TRUE 0.961 4.000 0.277 NA N NA
 5677168 5677169 SPC_0428 SPC_0429 ribD ribH TRUE 0.850 89.000 0.034 0.002 Y NA
 5677169 5677170 SPC_0429 SPC_0430 ribH nusB TRUE 0.882 21.000 0.347 1.000 N NA
 5677170 5677171 SPC_0430 SPC_0431 nusB thiL TRUE 0.539 79.000 0.225 1.000 N NA
 5677171 5677172 SPC_0431 SPC_0432 thiL pgpA TRUE 0.971 -22.000 0.206 1.000 N NA
 5677173 5677174 SPC_0433 SPC_0434 yajO dxs FALSE 0.110 57.000 0.009 1.000 N NA
 5677174 5677175 SPC_0434 SPC_0435 dxs ispA TRUE 0.911 24.000 0.060 1.000 Y NA
 5677175 5677176 SPC_0435 SPC_0436 ispA xseB TRUE 0.810 1.000 0.035 1.000 N NA
 5677178 5677179 SPC_0438 SPC_0439 phnV phnU TRUE 0.990 3.000 0.375 0.052 N NA
 5677179 5677180 SPC_0439 SPC_0440 phnU   TRUE 0.883 3.000 0.000 NA   NA
 5677180 5677181 SPC_0440 SPC_0441   phnS FALSE 0.442 36.000 0.000 NA   NA
 5677181 5677182 SPC_0441 SPC_0442 phnS phnR FALSE 0.108 198.000 0.152 1.000 N NA
 5677183 5677184 SPC_0443 SPC_0444 phnW phnX TRUE 0.985 7.000 0.315 0.062   NA
 5677185 5677186 SPC_0445 SPC_0446 thiJ apbA TRUE 0.962 -37.000 0.155 NA   NA
 5677188 5677189 SPC_0448 SPC_0449 yajR   FALSE 0.028 228.000 0.000 NA   NA
 5677190 5677191 SPC_0450 SPC_0451     TRUE 0.920 12.000 0.000 0.012   NA
 5677192 5677193 SPC_0452 SPC_0453 cyoE cyoD TRUE 0.916 12.000 0.118 0.091 N NA
 5677193 5677194 SPC_0453 SPC_0454 cyoD cyoC TRUE 0.999 0.000 0.485 0.053 Y NA
 5677194 5677195 SPC_0454 SPC_0455 cyoC cyoB TRUE 0.968 89.000 0.697 0.053 Y NA
 5677195 5677196 SPC_0455 SPC_0456 cyoB cyoA TRUE 0.984 11.000 0.041 0.004 Y NA
 5677196 5677197 SPC_0456 SPC_0457 cyoA   FALSE 0.022 247.000 0.000 NA   NA
 5677197 5677198 SPC_0457 SPC_0458   ampG FALSE 0.223 84.000 0.000 NA   NA
 5677198 5677199 SPC_0458 SPC_0459 ampG yajG TRUE 0.698 44.000 0.256 NA N NA
 5677200 5677201 SPC_0460 SPC_0461   tig FALSE 0.007 347.000 0.000 NA   NA
 5677201 5677202 SPC_0461 SPC_0462 tig clpP TRUE 0.844 139.000 0.351 1.000 Y NA
 5677202 5677203 SPC_0462 SPC_0463 clpP clpX FALSE 0.391 252.000 0.352 1.000 Y NA
 5677203 5677204 SPC_0463 SPC_0464 clpX lon TRUE 0.679 186.000 0.201 0.095 Y NA
 5677204 5677205 SPC_0464 SPC_0465 lon hupB FALSE 0.033 209.000 0.000 1.000 N NA
 5677205 5677206 SPC_0465 SPC_0466 hupB ppiD FALSE 0.010 291.000 0.000 1.000 N NA
 5677206 5677207 SPC_0466 SPC_0467 ppiD ybaV FALSE 0.060 150.000 0.033 1.000 N NA
 5677207 5677208 SPC_0467 SPC_0468 ybaV ybaW FALSE 0.173 104.000 0.027 1.000   NA
 5677209 5677210 SPC_0469 SPC_0470 ybaX ybaE FALSE 0.236 65.000 0.019 1.000   NA
 5677213 5677214 SPC_0473 SPC_0474 ybaO mdlA FALSE 0.412 41.000 0.000 NA   NA
 5677214 5677215 SPC_0474 SPC_0475 mdlA mdlB TRUE 1.000 -7.000 0.911 0.006 Y NA
 5677215 5677216 SPC_0475 SPC_0476 mdlB   FALSE 0.449 34.000 0.000 NA   NA
 5677216 5677217 SPC_0476 SPC_0477   glnK FALSE 0.349 51.000 0.000 NA   NA
 5677217 5677218 SPC_0477 SPC_0478 glnK amtB TRUE 0.687 32.000 0.156 1.000 N NA
 5677221 5677222 SPC_0481 SPC_0482 ybaZ ylaB FALSE 0.014 231.000 0.000 NA N NA
 5677223 5677224 SPC_0483 SPC_0484 rpmE2 rpmJ2 TRUE 0.966 6.000 0.083 0.013   NA
 5677225 5677226 SPC_0485 SPC_0486 ylaC maa FALSE 0.278 118.000 0.101 NA   NA
 5677226 5677227 SPC_0486 SPC_0487 maa hha FALSE 0.092 179.000 0.076 NA   NA
 5677227 5677228 SPC_0487 SPC_0488 hha ybaJ TRUE 0.491 28.000 0.000 NA   NA
 5677228 5677229 SPC_0488 SPC_0489 ybaJ acrB FALSE 0.003 496.000 0.000 NA   NA
 5677229 5677230 SPC_0489 SPC_0490 acrB acrA TRUE 0.906 23.000 0.458 1.000 N NA
 5677231 5677232 SPC_0491 SPC_0492 acrR aefA FALSE 0.090 125.000 0.000 NA N NA
 5677233 5677234 SPC_0493 SPC_0494   ybaM FALSE 0.188 70.000 0.037 NA   NA
 5677234 5677235 SPC_0494 SPC_0495 ybaM priC TRUE 0.948 14.000 0.474 NA   NA
 5677236 5677237 SPC_0496 SPC_0497 ybaN apt FALSE 0.089 153.000 0.043 NA   NA
 5677237 5677238 SPC_0497 SPC_0498 apt dnaX FALSE 0.228 114.000 0.088 1.000 N NA
 5677238 5677239 SPC_0498 SPC_0499 dnaX ybaB TRUE 0.832 46.000 0.411 NA   NA
 5677239 5677240 SPC_0499 SPC_0500 ybaB recR TRUE 0.992 0.000 0.604 NA   NA
 5677240 5677241 SPC_0500 SPC_0501 recR htpG FALSE 0.101 87.000 0.028 1.000 N NA
 5677241 5677242 SPC_0501 SPC_0502 htpG adk FALSE 0.046 242.000 0.035 0.095 N NA
 5677242 5677243 SPC_0502 SPC_0503 adk   TRUE 0.682 13.000 0.000 NA   NA
 5677243 5677244 SPC_0503 SPC_0504   hemH TRUE 0.785 10.000 0.000 NA   NA
 5677247 5677248 SPC_0507 SPC_0508 ybaL fsr FALSE 0.018 215.000 0.000 NA N NA
 5677250 5677251 SPC_0510 SPC_0511 ybaK ybaP FALSE 0.022 202.000 0.022 NA   NA
 5677251 5677252 SPC_0511 SPC_0512 ybaP   FALSE 0.217 86.000 0.000 NA   NA
 5677252 5677253 SPC_0512 SPC_0513   ybaR FALSE 0.114 154.000 0.000 NA   NA
 5677255 5677256 SPC_0515 SPC_0516 ybbJ   TRUE 0.997 -3.000 0.313 NA Y NA
 5677257 5677258 SPC_0517 SPC_0518 ybbL ybbM TRUE 0.962 -13.000 0.127 NA   NA
 5677259 5677260 SPC_0519 SPC_0520 ybbN ybbO TRUE 0.694 33.000 0.118 1.000   NA
 5677260 5677261 SPC_0520 SPC_0521 ybbO tesA FALSE 0.179 155.000 0.072 1.000   NA
 5677262 5677263 SPC_0522 SPC_0523 ybbA ybbP TRUE 0.998 -3.000 0.535 NA Y NA
 5677263 5677264 SPC_0523 SPC_0524 ybbP   FALSE 0.011 186.000 0.034 NA N NA
 5677264 5677265 SPC_0524 SPC_0525   sfbA FALSE 0.010 257.000 0.000 NA N NA
 5677265 5677266 SPC_0525 SPC_0526 sfbA sfbB TRUE 0.948 31.000 0.261 NA Y NA
 5677266 5677267 SPC_0526 SPC_0527 sfbB sfbC TRUE 0.999 -7.000 0.957 1.000 Y NA
 5677268 5677269 SPC_0528 SPC_0529 ybbB ybbS FALSE 0.127 70.000 0.012 NA   NA
 5677270 5677271 SPC_0530 SPC_0531 allA allR TRUE 0.791 79.000 0.625 1.000 N NA
 5677271 5677272 SPC_0531 SPC_0532 allR gcl FALSE 0.275 85.000 0.054 1.000   NA
 5677272 5677273 SPC_0532 SPC_0533 gcl   TRUE 0.771 13.000 0.065 1.000   NA
 5677273 5677274 SPC_0533 SPC_0534   garR FALSE 0.373 101.000 0.154 1.000 N NA
 5677274 5677275 SPC_0534 SPC_0535 garR   FALSE 0.257 57.000 0.051 1.000 N NA
 5677275 5677276 SPC_0535 SPC_0536   allP TRUE 0.518 96.000 0.250 1.000 N NA
 5677276 5677277 SPC_0536 SPC_0537 allP allB TRUE 0.940 28.000 0.161 1.000 Y NA
 5677277 5677278 SPC_0537 SPC_0538 allB ybbY TRUE 0.892 53.000 0.161 1.000 Y NA
 5677278 5677279 SPC_0538 SPC_0539 ybbY glxK TRUE 0.710 23.000 0.133 1.000 N NA
 5677280 5677281 SPC_0540 SPC_0541 ylbA allC TRUE 0.755 11.000 0.059 NA   NA
 5677281 5677282 SPC_0541 SPC_0542 allC allD TRUE 0.770 22.000 0.174 1.000 N NA
 5677283 5677284 SPC_0543 SPC_0544 fdrA ylbE TRUE 0.905 22.000 0.412 NA   NA
 5677284 5677285 SPC_0544 SPC_0545 ylbE ylbF TRUE 0.924 12.000 0.265 NA   NA
 5677285 5677286 SPC_0545 SPC_0546 ylbF arcC TRUE 0.978 4.000 0.375 NA   NA
 5677287 5677288 SPC_0547 SPC_0548 purK purE TRUE 0.998 -3.000 0.136 0.001 Y NA
 5677288 5677289 SPC_0548 SPC_0549 purE lpxH FALSE 0.137 118.000 0.016 1.000   NA
 5677289 5677290 SPC_0549 SPC_0550 lpxH ppiB TRUE 0.976 3.000 0.237 1.000   NA
 5677292 5677293 SPC_0552 SPC_0553     FALSE 0.192 108.000 0.059 NA   NA
 5677293 5677294 SPC_0553 SPC_0554   ybcI TRUE 0.950 -7.000 0.087 NA   NA
 5677294 5677295 SPC_0554 SPC_0555 ybcI ybcJ FALSE 0.074 127.000 0.011 NA   NA
 5677295 5677296 SPC_0555 SPC_0556 ybcJ folD TRUE 0.921 2.000 0.055 1.000   NA
 5677297 5677298 SPC_0557 SPC_0558 fimA fimI TRUE 0.978 76.000 0.750 0.011 Y NA
 5677298 5677299 SPC_0558 SPC_0559 fimI fimC TRUE 0.986 23.000 0.714 1.000 Y NA
 5677299 5677300 SPC_0559 SPC_0560 fimC fimD TRUE 0.986 31.000 0.875 1.000 Y NA
 5677300 5677301 SPC_0560 SPC_0561 fimD fimH TRUE 0.992 15.000 0.875 NA Y NA
 5677301 5677302 SPC_0561 SPC_0562 fimH fimF TRUE 0.996 10.000 0.875 NA Y NA
 5677303 5677304 SPC_0563 SPC_0564 fimZ fimY FALSE 0.002 604.000 0.000 NA   NA
 5677304 5677305 SPC_0564 SPC_0565 fimY   TRUE 0.565 19.000 0.000 NA   NA
 5677305 5677306 SPC_0565 SPC_0566   fimW FALSE 0.096 162.000 0.000 NA   NA
 5677307 5677308 SPC_0567 SPC_t006     FALSE 0.289 63.000 0.000 NA   NA
 5677310 5677311 SPC_0569 SPC_0570 rfbI yfdH TRUE 0.928 -3.000 0.000 NA   NA
 5677311 5677312 SPC_0570 SPC_0571 yfdH   TRUE 0.919 -10.000 0.000 NA   NA
 5677313 5677314 SPC_0572 SPC_0573     FALSE 0.075 177.000 0.000 NA   NA
 5677314 5677315 SPC_0573 SPC_0574     FALSE 0.323 175.000 0.000 0.003   NA
 5677315 5677316 SPC_0574 SPC_0575     FALSE 0.184 109.000 0.000 NA   NA
 5677316 5677317 SPC_0575 SPC_0576     FALSE 0.211 88.000 0.000 NA   NA
 5677317 5677318 SPC_0576 SPC_0577   yfdH TRUE 0.928 -3.000 0.000 NA   NA
 5677318 5677319 SPC_0577 SPC_0578 yfdH rfbI TRUE 0.928 -3.000 0.000 NA   NA
 5677321 5677322 SPC_0580 SPC_0581     FALSE 0.012 291.000 0.000 NA   NA
 5677323 5677324 SPC_0582 SPC_0583 ykgC   TRUE 0.632 157.000 0.667 NA   NA
 5677324 5677325 SPC_0583 SPC_0584   ykgB TRUE 0.619 13.000 0.043 NA   NA
 5677329 5677330 SPC_0588 SPC_0589   apeE FALSE 0.197 99.000 0.000 NA   NA
 5677331 5677332 SPC_0590 SPC_0591 nfnB ybdF TRUE 0.783 97.000 0.667 NA   NA
 5677332 5677333 SPC_0591 SPC_0592 ybdF   TRUE 0.975 0.000 0.208 NA   NA
 5677335 5677336 SPC_0594 SPC_0595 ybdJ ybdK TRUE 0.887 67.000 1.000 NA   NA
 5677336 5677337 SPC_0595 SPC_0596 ybdK entD TRUE 0.776 12.000 0.000 1.000   NA
 5677337 5677338 SPC_0596 SPC_0597 entD fepA TRUE 0.898 46.000 0.700 1.000 N NA
 5677339 5677340 SPC_0598 SPC_0599 fes ybdZ TRUE 0.845 31.000 0.320 NA   NA
 5677340 5677341 SPC_0599 SPC_0600 ybdZ entF TRUE 0.928 -3.000 0.000 NA   NA
 5677341 5677342 SPC_0600 SPC_0601 entF fepE FALSE 0.018 250.000 0.000 1.000 N NA
 5677343 5677344 SPC_0602 SPC_0603 fepC fepG TRUE 0.993 -3.000 0.077 1.000 Y NA
 5677344 5677345 SPC_0603 SPC_0604 fepG fepD TRUE 0.998 0.000 0.300 0.051 Y NA
 5677348 5677349 SPC_0607 SPC_0608 entC entE TRUE 0.977 7.000 0.000 1.000 Y NA
 5677349 5677350 SPC_0608 SPC_0609 entE entB TRUE 0.947 14.000 0.000 1.000 Y NA
 5677350 5677351 SPC_0609 SPC_0610 entB entA TRUE 0.989 0.000 0.000 1.000 Y NA
 5677351 5677352 SPC_0610 SPC_0611 entA ybdB TRUE 0.984 3.000 0.065 NA Y NA
 5677352 5677353 SPC_0611 SPC_0612 ybdB cstA FALSE 0.178 182.000 0.222 NA N NA
 5677353 5677354 SPC_0612 SPC_0613 cstA ybdD TRUE 0.716 64.000 0.333 NA   NA
 5677357 5677358 SPC_0616 SPC_0617 ybdM   TRUE 0.986 -27.000 0.333 1.000   NA
 5677358 5677359 SPC_0617 SPC_0618   ybdO FALSE 0.121 166.000 0.000 1.000   NA
 5677359 5677360 SPC_0618 SPC_0619 ybdO dsbG FALSE 0.005 317.000 0.000 NA N NA
 5677361 5677362 SPC_0620 SPC_0621 ahpC ahpF TRUE 0.908 125.000 0.551 1.000 Y NA
 5677362 5677363 SPC_0621 SPC_0622 ahpF   FALSE 0.032 333.000 0.000 0.052   NA
 5677363 5677364 SPC_0622 SPC_0623     TRUE 0.997 -7.000 0.556 0.052   NA
 5677364 5677365 SPC_0623 SPC_0624     TRUE 0.992 15.000 0.444 0.052 Y NA
 5677365 5677366 SPC_0624 SPC_0625     TRUE 0.996 0.000 1.000 1.000   NA
 5677368 5677369 SPC_0627 SPC_0628   ybdR FALSE 0.298 85.000 0.083 NA   NA
 5677370 5677371 SPC_0629 SPC_0630 rnk rna FALSE 0.026 235.000 0.000 NA   NA
 5677371 5677372 SPC_0630 SPC_0631 rna citT FALSE 0.181 110.000 0.000 NA   NA
 5677372 5677373 SPC_0631 SPC_0632 citT citG FALSE 0.386 38.000 0.000 1.000 N NA
 5677373 5677374 SPC_0632 SPC_0633 citG citX TRUE 0.997 -25.000 0.400 1.000 Y NA
 5677374 5677375 SPC_0633 SPC_0634 citX citF TRUE 0.961 4.000 0.231 1.000 N NA
 5677375 5677376 SPC_0634 SPC_0635 citF citE TRUE 0.986 10.000 0.373 0.002 N NA
 5677376 5677377 SPC_0635 SPC_0636 citE citD TRUE 0.997 -3.000 0.537 0.002 N NA
 5677377 5677378 SPC_0636 SPC_0637 citD citC TRUE 0.992 -3.000 0.000 1.000 Y NA
 5677379 5677380 SPC_0638 SPC_0639     TRUE 0.816 8.000 0.000 NA   NA
 5677380 5677381 SPC_0639 SPC_0640   dpiB TRUE 0.785 10.000 0.000 NA   NA
 5677381 5677382 SPC_0640 SPC_0641 dpiB dpiA TRUE 0.990 -10.000 0.000 1.000 Y NA
 5677384 5677385 SPC_0643 SPC_0644 pagP cspE FALSE 0.314 188.000 0.333 1.000   NA
 5677387 5677388 SPC_0646 SPC_0647 ybeM tatE FALSE 0.457 129.000 0.196 1.000   NA
 5677389 5677390 SPC_0648 SPC_0649 lipA   FALSE 0.412 41.000 0.000 NA   NA
 5677390 5677391 SPC_0649 SPC_0650   ybeF FALSE 0.473 31.000 0.000 NA   NA
 5677391 5677392 SPC_0650 SPC_0651 ybeF lipB FALSE 0.009 302.000 0.000 1.000 N NA
 5677392 5677393 SPC_0651 SPC_0652 lipB   TRUE 0.496 100.000 0.219 NA   NA
 5677393 5677394 SPC_0652 SPC_0653   dacA FALSE 0.319 76.000 0.081 NA   NA
 5677394 5677395 SPC_0653 SPC_0654 dacA rlpA TRUE 0.859 140.000 0.475 NA Y NA
 5677395 5677396 SPC_0654 SPC_0655 rlpA mrdB FALSE 0.357 11.000 0.035 NA N NA
 5677396 5677397 SPC_0655 SPC_0656 mrdB pbpA TRUE 0.831 3.000 0.046 1.000 N NA
 5677397 5677398 SPC_0656 SPC_0657 pbpA ybeA FALSE 0.342 31.000 0.031 NA   NA
 5677398 5677399 SPC_0657 SPC_0658 ybeA ybeB TRUE 0.973 4.000 0.307 NA   NA
 5677399 5677400 SPC_0658 SPC_0659 ybeB cobC FALSE 0.009 329.000 0.000 NA   NA
 5677402 5677403 SPC_0661 SPC_0662 nadD holA TRUE 0.885 -7.000 0.045 1.000 N NA
 5677403 5677404 SPC_0662 SPC_0663 holA rlpB TRUE 0.916 9.000 0.199 NA N NA
 5677404 5677405 SPC_0663 SPC_0664 rlpB leuS TRUE 0.809 15.000 0.182 NA N NA
 5677405 5677406 SPC_0664 SPC_0665 leuS   FALSE 0.166 127.000 0.000 NA   NA
 5677407 5677408 SPC_0666 SPC_0667     TRUE 0.997 -16.000 0.409 0.001   NA
 5677408 5677409 SPC_0667 SPC_0668     FALSE 0.438 50.000 0.000 1.000   NA
 5677409 5677410 SPC_0668 SPC_0669     FALSE 0.352 65.000 0.000 1.000   NA
 5677410 5677411 SPC_0669 SPC_0670   ybeL FALSE 0.208 90.000 0.000 NA   NA
 5677413 5677414 SPC_0672 SPC_0673 ybeR ybeS TRUE 0.928 -3.000 0.000 NA   NA
 5677414 5677415 SPC_0673 SPC_0674 ybeS ybeU TRUE 0.710 12.000 0.000 NA   NA
 5677415 5677416 SPC_0674 SPC_0675 ybeU ybeV TRUE 0.928 -3.000 0.000 NA   NA
 5677417 5677418 SPC_0676 SPC_0677     FALSE 0.244 76.000 0.000 NA   NA
 5677418 5677419 SPC_0677 SPC_0678   ybeK FALSE 0.465 32.000 0.000 NA   NA
 5677419 5677420 SPC_0678 SPC_0679 ybeK gltL FALSE 0.348 117.000 0.195 NA N NA
 5677420 5677421 SPC_0679 SPC_0680 gltL gltK TRUE 0.997 0.000 0.379 1.000 Y NA
 5677421 5677422 SPC_0680 SPC_0681 gltK gltJ TRUE 0.999 0.000 0.933 0.016 Y NA
 5677422 5677423 SPC_0681 SPC_0682 gltJ ybeJ TRUE 0.660 160.000 0.000 0.051 Y NA
 5677423 5677424 SPC_0682 SPC_0683 ybeJ lnt FALSE 0.007 337.000 0.000 1.000 N NA
 5677424 5677425 SPC_0683 SPC_0684 lnt ybeX TRUE 0.931 20.000 0.557 1.000 N NA
 5677425 5677426 SPC_0684 SPC_0685 ybeX ybeY FALSE 0.234 158.000 0.150 NA   NA
 5677426 5677427 SPC_0685 SPC_0686 ybeY ybeZ TRUE 0.991 -3.000 0.457 NA   NA
 5677427 5677428 SPC_0686 SPC_0687 ybeZ miaB FALSE 0.266 166.000 0.220 1.000 N NA
 5677430 5677431 SPC_t007 SPC_t008     FALSE 0.391 44.000 0.000 NA   NA
 5677431 5677432 SPC_t008 SPC_t009     FALSE 0.373 47.000 0.000 NA   NA
 5677432 5677433 SPC_t009 SPC_t010     TRUE 0.610 16.000 0.000 NA   NA
 5677433 5677434 SPC_t010 SPC_t011     FALSE 0.442 36.000 0.000 NA   NA
 5677434 5677435 SPC_t011 SPC_t012     TRUE 0.524 24.000 0.000 NA   NA
 5677435 5677436 SPC_t012 SPC_t013     TRUE 0.806 9.000 0.000 NA   NA
 5677436 5677437 SPC_t013 SPC_0689   asnB FALSE 0.031 222.000 0.000 NA   NA
 5677437 5677438 SPC_0689 SPC_0690 asnB nagD FALSE 0.010 290.000 0.000 1.000 N NA
 5677438 5677439 SPC_0690 SPC_0691 nagD nagC TRUE 0.857 47.000 0.070 1.000 Y NA
 5677439 5677440 SPC_0691 SPC_0692 nagC nagA TRUE 0.996 5.000 0.571 1.000 Y NA
 5677440 5677441 SPC_0692 SPC_0693 nagA nagB TRUE 0.983 60.000 0.557 0.001 Y NA
 5677442 5677443 SPC_0694 SPC_0695 nagE glnS FALSE 0.010 211.000 0.006 1.000 N NA
 5677443 5677444 SPC_0695 SPC_0696 glnS ybfM FALSE 0.005 452.000 0.000 1.000   NA
 5677444 5677445 SPC_0696 SPC_0697 ybfM ybfN FALSE 0.355 50.000 0.000 NA   NA
 5677446 5677447 SPC_0698 SPC_0699 citA citB FALSE 0.397 51.000 0.069 NA   NA
 5677447 5677448 SPC_0699 SPC_0700 citB   TRUE 0.993 -13.000 0.618 NA   NA
 5677448 5677449 SPC_0700 SPC_0701     FALSE 0.157 98.000 0.053 1.000 N NA
 5677449 5677450 SPC_0701 SPC_0702   fur FALSE 0.293 115.000 0.020 0.063 N NA
 5677450 5677451 SPC_0702 SPC_0703 fur   FALSE 0.035 282.000 0.156 1.000 N NA
 5677451 5677452 SPC_0703 SPC_0704   ybfE TRUE 0.851 52.000 0.473 1.000   NA
 5677452 5677453 SPC_0704 SPC_0705 ybfE ybfF TRUE 0.489 134.000 0.276 NA   NA
 5677454 5677455 SPC_0706 SPC_0707 seqA pgm TRUE 0.720 25.000 0.151 1.000 N NA
 5677456 5677457 SPC_0708 SPC_0709   potE FALSE 0.328 65.000 0.050 1.000   NA
 5677457 5677458 SPC_0709 SPC_0710 potE speF TRUE 0.993 -3.000 0.087 1.000 Y NA
 5677460 5677461 SPC_0712 SPC_0713 kdpE kdpD TRUE 0.998 -3.000 0.385 1.000 Y NA
 5677461 5677462 SPC_0713 SPC_0714 kdpD kdpC FALSE 0.371 69.000 0.100 1.000 N NA
 5677462 5677463 SPC_0714 SPC_0715 kdpC kdpB TRUE 0.999 6.000 0.877 0.001 Y NA
 5677463 5677464 SPC_0715 SPC_0716 kdpB kdpA TRUE 0.999 -3.000 0.201 0.001 Y NA
 5677464 5677465 SPC_0716 SPC_0717 kdpA   TRUE 0.986 0.000 0.000 0.001   NA
 5677466 5677467 SPC_0718 SPC_0719 ybfA phrB FALSE 0.074 111.000 0.004 NA   NA
 5677469 5677470 SPC_0721 SPC_0722 ybgI ybgJ TRUE 0.577 16.000 0.050 NA   NA
 5677470 5677471 SPC_0722 SPC_0723 ybgJ ybgK TRUE 0.997 -6.000 0.379 NA Y NA
 5677471 5677472 SPC_0723 SPC_0724 ybgK ybgL TRUE 0.978 -10.000 0.211 NA   NA
 5677472 5677473 SPC_0724 SPC_0725 ybgL nei FALSE 0.171 122.000 0.037 1.000   NA
 5677474 5677475 SPC_0726 SPC_0727 abrB gltA FALSE 0.063 137.000 0.005 NA   NA
 5677476 5677477 SPC_0728 SPC_0729   sdhC FALSE 0.004 409.000 0.000 NA   NA
 5677477 5677478 SPC_0729 SPC_0730 sdhC sdhD TRUE 0.999 -6.000 0.453 0.001 Y NA
 5677478 5677479 SPC_0730 SPC_0731 sdhD sdhA TRUE 0.999 0.000 0.705 0.002 Y NA
 5677479 5677480 SPC_0731 SPC_0732 sdhA sdhB TRUE 0.996 14.000 0.604 0.002 Y NA
 5677480 5677481 SPC_0732 SPC_0733 sdhB sucA FALSE 0.026 526.000 0.067 1.000 Y NA
 5677481 5677482 SPC_0733 SPC_0734 sucA sucB TRUE 0.991 15.000 0.667 1.000 Y NA
 5677482 5677483 SPC_0734 SPC_0735 sucB sucC TRUE 0.706 142.000 0.136 1.000 Y NA
 5677483 5677484 SPC_0735 SPC_0736 sucC sucD TRUE 0.999 0.000 0.806 0.001 Y NA
 5677484 5677485 SPC_0736 SPC_0737 sucD   TRUE 0.484 29.000 0.000 NA   NA
 5677485 5677486 SPC_0737 SPC_0738     FALSE 0.213 87.000 0.000 NA   NA
 5677486 5677487 SPC_0738 SPC_0739     FALSE 0.002 622.000 0.000 NA   NA
 5677489 5677490 SPC_0741 SPC_0742 cydA cydB TRUE 0.965 16.000 0.000 0.052 Y NA
 5677490 5677491 SPC_0742 SPC_0743 cydB ybgT TRUE 0.823 15.000 0.149 NA   NA
 5677491 5677492 SPC_0743 SPC_0744 ybgT ybgE TRUE 0.984 0.000 0.310 NA   NA
 5677492 5677493 SPC_0744 SPC_0745 ybgE ybgC FALSE 0.048 229.000 0.095 NA   NA
 5677493 5677494 SPC_0745 SPC_0746 ybgC tolQ TRUE 0.986 6.000 0.593 1.000   NA
 5677494 5677495 SPC_0746 SPC_0747 tolQ tolR TRUE 0.998 4.000 0.556 0.064 Y NA
 5677495 5677496 SPC_0747 SPC_0748 tolR tolA FALSE 0.345 65.000 0.114 NA N NA
 5677496 5677497 SPC_0748 SPC_0749 tolA tolB FALSE 0.079 112.000 0.051 NA N NA
 5677497 5677498 SPC_0749 SPC_0750 tolB pal TRUE 0.971 11.000 0.592 1.000 N NA
 5677498 5677499 SPC_0750 SPC_0751 pal ybgF TRUE 0.885 10.000 0.088 1.000   NA
 5677499 5677500 SPC_0751 SPC_t014 ybgF   FALSE 0.091 165.000 0.000 NA   NA
 5677500 5677501 SPC_t014 SPC_t015     FALSE 0.146 140.000 0.000 NA   NA
 5677501 5677502 SPC_t015 SPC_t016     FALSE 0.157 135.000 0.000 NA   NA
 5677502 5677503 SPC_t016 SPC_0752   nadA FALSE 0.026 235.000 0.000 NA   NA
 5677503 5677504 SPC_0752 SPC_0753 nadA pnuC TRUE 0.884 25.000 0.023 1.000 Y NA
 5677505 5677506 SPC_0754 SPC_0755 ybgR ybgS FALSE 0.181 111.000 0.057 NA   NA
 5677508 5677509 SPC_0757 SPC_0758     TRUE 0.991 15.000 0.262 0.002 Y NA
 5677512 5677513 SPC_0761 SPC_0762   oadG TRUE 0.676 50.000 0.000 0.009 N NA
 5677513 5677514 SPC_0762 SPC_0763 oadG oadA TRUE 0.996 16.000 0.720 0.003 Y NA
 5677514 5677515 SPC_0763 SPC_0764 oadA oadB TRUE 0.997 16.000 0.886 0.003 Y NA
 5677515 5677516 SPC_0764 SPC_0765 oadB   FALSE 0.011 119.000 0.019 NA N NA
 5677516 5677517 SPC_0765 SPC_0766     FALSE 0.003 380.000 0.000 NA N NA
 5677517 5677518 SPC_0766 SPC_0767     TRUE 0.999 0.000 0.833 1.000 Y NA
 5677519 5677520 SPC_0768 SPC_0769 gpmA galM FALSE 0.172 224.000 0.009 1.000 Y NA
 5677520 5677521 SPC_0769 SPC_0770 galM galK TRUE 0.997 -6.000 0.083 0.001 Y NA
 5677521 5677522 SPC_0770 SPC_0771 galK galT TRUE 0.994 3.000 0.370 0.001 N NA
 5677522 5677523 SPC_0771 SPC_0772 galT galE TRUE 0.938 11.000 0.053 0.001 N NA
 5677523 5677524 SPC_0772 SPC_0773 galE   FALSE 0.030 223.000 0.000 NA   NA
 5677524 5677525 SPC_0773 SPC_0774   modF FALSE 0.083 171.000 0.000 NA   NA
 5677525 5677526 SPC_0774 SPC_0775 modF modE TRUE 0.570 68.000 0.000 0.092   NA
 5677527 5677528 SPC_0776 SPC_0777 ybhT modA FALSE 0.110 167.000 0.072 NA   NA
 5677528 5677529 SPC_0777 SPC_0778 modA modB TRUE 0.999 0.000 0.627 0.001 Y NA
 5677529 5677530 SPC_0778 SPC_0779 modB modC TRUE 0.999 3.000 0.537 0.001 Y NA
 5677534 5677535 SPC_0783 SPC_0784 hutI hutG TRUE 0.973 -3.000 0.171 1.000 N NA
 5677535 5677536 SPC_0784 SPC_0785 hutG hutC FALSE 0.369 45.000 0.062 1.000 N NA
 5677536 5677537 SPC_0785 SPC_0786 hutC hutU FALSE 0.025 197.000 0.037 1.000 N NA
 5677537 5677538 SPC_0786 SPC_0787 hutU hutH TRUE 0.998 2.000 0.315 0.001 Y NA
 5677539 5677540 SPC_0788 SPC_0789 ybhB bioA FALSE 0.140 58.000 0.003 NA   NA
 5677541 5677542 SPC_0790 SPC_0791 bioB bioF TRUE 0.998 -3.000 0.168 0.002 Y NA
 5677542 5677543 SPC_0791 SPC_0792 bioF bioC TRUE 0.988 -16.000 0.133 0.002 N NA
 5677543 5677544 SPC_0792 SPC_0793 bioC bioD TRUE 0.983 -7.000 0.054 0.002 N NA
 5677544 5677545 SPC_0793 SPC_0794 bioD   FALSE 0.247 86.000 0.067 NA   NA
 5677545 5677546 SPC_0794 SPC_0795   uvrB FALSE 0.005 397.000 0.000 NA   NA
 5677546 5677547 SPC_0795 SPC_0796 uvrB   FALSE 0.010 309.000 0.000 NA   NA
 5677547 5677548 SPC_0796 SPC_0797   slrP TRUE 0.816 8.000 0.000 NA   NA
 5677550 5677551 SPC_0799 SPC_0800 moaA moaB TRUE 0.973 22.000 0.108 0.004 Y NA
 5677551 5677552 SPC_0800 SPC_0801 moaB moaC TRUE 0.996 3.000 0.109 0.004 Y NA
 5677552 5677553 SPC_0801 SPC_0802 moaC moaD TRUE 0.998 -7.000 0.175 0.004 Y NA
 5677553 5677554 SPC_0802 SPC_0803 moaD moaE TRUE 0.999 2.000 0.501 0.004 Y NA
 5677554 5677555 SPC_0803 SPC_0804 moaE ybhL FALSE 0.138 78.000 0.025 NA   NA
 5677555 5677556 SPC_0804 SPC_0805 ybhL ybhM FALSE 0.092 145.000 0.037 NA   NA
 5677556 5677557 SPC_0805 SPC_0806 ybhM   TRUE 0.500 27.000 0.000 NA   NA
 5677557 5677558 SPC_0806 SPC_0807     TRUE 0.816 8.000 0.000 NA   NA
 5677559 5677560 SPC_0808 SPC_0809 ybhN ybhO TRUE 0.911 0.000 0.000 NA   NA
 5677560 5677561 SPC_0809 SPC_0810 ybhO ybhP TRUE 0.928 -3.000 0.000 NA   NA
 5677563 5677564 SPC_0812 SPC_0813 ybhR ybhS TRUE 0.962 116.000 0.609 0.006 Y NA
 5677564 5677565 SPC_0813 SPC_0814 ybhS ybhF TRUE 0.967 20.000 0.547 0.092   NA
 5677565 5677566 SPC_0814 SPC_0815 ybhF   TRUE 0.994 -7.000 0.545 1.000   NA
 5677566 5677567 SPC_0815 SPC_0816   ybiH TRUE 0.977 0.000 0.236 1.000 N NA
 5677568 5677569 SPC_0817 SPC_0818   dinG TRUE 0.831 69.000 0.029 0.092 Y NA
 5677569 5677570 SPC_0818 SPC_0819 dinG ybiB FALSE 0.338 30.000 0.041 1.000 N NA
 5677571 5677572 SPC_0820 SPC_0821 ybiJ ybiI FALSE 0.007 285.000 0.027 NA   NA
 5677574 5677575 SPC_0823 SPC_0824 ybiO glnQ FALSE 0.014 188.000 0.039 NA N NA
 5677575 5677576 SPC_0824 SPC_0825 glnQ glnP TRUE 0.989 -3.000 0.026 1.000 Y NA
 5677576 5677577 SPC_0825 SPC_0826 glnP glnH TRUE 0.729 144.000 0.000 0.064 Y NA
 5677577 5677578 SPC_0826 SPC_0827 glnH dps FALSE 0.003 477.000 0.000 1.000 N NA
 5677578 5677579 SPC_0827 SPC_0828 dps   FALSE 0.173 116.000 0.000 NA   NA
 5677579 5677580 SPC_0828 SPC_0829   ybiF TRUE 0.484 29.000 0.000 NA   NA
 5677583 5677584 SPC_0832 SPC_0833     FALSE 0.004 450.000 0.000 NA   NA
 5677584 5677585 SPC_0833 SPC_0834   ybiR TRUE 0.791 -3.000 0.014 1.000 N NA
 5677589 5677590 SPC_0838 SPC_0839   ybiV(1) TRUE 0.883 3.000 0.000 NA   NA
 5677591 5677592 SPC_0840 SPC_0841 ybiW ybiY TRUE 0.987 6.000 0.316 0.003 N NA
 5677592 5677593 SPC_0841 SPC_0842 ybiY moeB FALSE 0.013 278.000 0.000 1.000 N NA
 5677593 5677594 SPC_0842 SPC_0843 moeB moeA TRUE 0.999 0.000 0.323 0.004 Y NA
 5677595 5677596 SPC_0844 SPC_0845 ybiK yliA TRUE 0.807 11.000 0.000 1.000   NA
 5677596 5677597 SPC_0845 SPC_0846 yliA yliB TRUE 0.541 33.000 0.000 1.000   NA
 5677597 5677598 SPC_0846 SPC_0847 yliB yliC TRUE 0.982 61.000 0.803 0.050 Y NA
 5677598 5677599 SPC_0847 SPC_0848 yliC yliD TRUE 0.999 3.000 0.689 0.050 Y NA
 5677601 5677602 SPC_0850 SPC_0851     FALSE 0.261 70.000 0.000 NA   NA
 5677602 5677603 SPC_0851 SPC_0852     FALSE 0.002 707.000 0.000 NA   NA
 5677603 5677604 SPC_0852 SPC_0853   etfB TRUE 0.788 8.000 0.000 1.000 N NA
 5677604 5677605 SPC_0853 SPC_0854 etfB etfA TRUE 0.983 11.000 0.000 0.014 Y NA
 5677605 5677606 SPC_0854 SPC_0855 etfA   FALSE 0.455 33.000 0.000 NA   NA
 5677606 5677607 SPC_0855 SPC_0856     FALSE 0.284 64.000 0.000 NA   NA
 5677607 5677608 SPC_0856 SPC_0857     FALSE 0.006 647.000 0.000 0.051 N NA
 5677609 5677610 SPC_0858 SPC_0859     FALSE 0.018 262.000 0.000 NA   NA
 5677614 5677615 SPC_0863 SPC_0864 deoR ybjG TRUE 0.644 72.000 0.235 1.000   NA
 5677617 5677618 SPC_0866 SPC_0867     TRUE 0.928 -3.000 0.000 NA   NA
 5677620 5677621 SPC_0869 SPC_0870     TRUE 0.578 18.000 0.000 NA   NA
 5677621 5677622 SPC_0870 SPC_0871     FALSE 0.206 91.000 0.000 NA   NA
 5677622 5677623 SPC_0871 SPC_0872     TRUE 0.710 12.000 0.000 NA   NA
 5677624 5677625 SPC_0873 SPC_0874     TRUE 0.981 10.000 0.667 NA   NA
 5677627 5677628 SPC_0876 SPC_0877     TRUE 0.789 68.000 0.500 NA   NA
 5677628 5677629 SPC_0877 SPC_0878     TRUE 0.933 18.000 0.500 NA   NA
 5677629 5677630 SPC_0878 SPC_0879     TRUE 0.928 -3.000 0.000 NA   NA
 5677630 5677631 SPC_0879 SPC_0880     TRUE 0.594 134.000 0.400 NA   NA
 5677632 5677633 SPC_0881 SPC_0882     TRUE 0.675 51.000 0.212 NA   NA
 5677633 5677634 SPC_0882 SPC_0883     TRUE 0.989 -3.000 0.364 NA   NA
 5677634 5677635 SPC_0883 SPC_0884     TRUE 0.816 8.000 0.000 NA   NA
 5677636 5677637 SPC_0885 SPC_0886     TRUE 0.757 62.000 0.333 1.000   NA
 5677637 5677638 SPC_0886 SPC_0887     TRUE 0.966 4.000 0.207 1.000   NA
 5677638 5677639 SPC_0887 SPC_0888     TRUE 0.943 61.000 0.568 0.001   NA
 5677639 5677640 SPC_0888 SPC_0889     TRUE 0.994 -3.000 0.659 NA   NA
 5677640 5677641 SPC_0889 SPC_0890     TRUE 0.928 -3.000 0.000 NA   NA
 5677641 5677642 SPC_0890 SPC_0891     TRUE 0.928 -3.000 0.000 NA   NA
 5677642 5677643 SPC_0891 SPC_0892     TRUE 0.996 -3.000 0.939 NA   NA
 5677643 5677644 SPC_0892 SPC_0893     TRUE 0.785 10.000 0.000 NA   NA
 5677644 5677645 SPC_0893 SPC_0894     TRUE 0.928 -3.000 0.000 NA   NA
 5677645 5677646 SPC_0894 SPC_0895     TRUE 0.985 0.000 0.333 NA   NA
 5677646 5677647 SPC_0895 SPC_0896     FALSE 0.203 147.000 0.094 NA   NA
 5677647 5677648 SPC_0896 SPC_0897     FALSE 0.095 188.000 0.094 NA   NA
 5677648 5677649 SPC_0897 SPC_0898     TRUE 0.958 -3.000 0.097 NA   NA
 5677649 5677650 SPC_0898 SPC_0899     TRUE 0.995 -3.000 0.738 NA   NA
 5677650 5677651 SPC_0899 SPC_0900     TRUE 0.995 -7.000 0.738 NA   NA
 5677651 5677652 SPC_0900 SPC_0901     TRUE 0.785 10.000 0.000 NA   NA
 5677652 5677653 SPC_0901 SPC_0902     TRUE 0.902 -37.000 0.000 NA   NA
 5677653 5677654 SPC_0902 SPC_0903     TRUE 0.682 13.000 0.000 NA   NA
 5677654 5677655 SPC_0903 SPC_0904     TRUE 0.919 -10.000 0.000 NA   NA
 5677655 5677656 SPC_0904 SPC_0905     TRUE 0.961 -28.000 0.147 NA   NA
 5677656 5677657 SPC_0905 SPC_0906     TRUE 0.914 0.000 0.059 NA   NA
 5677658 5677659 SPC_0907 SPC_0908     FALSE 0.029 225.000 0.000 NA   NA
 5677659 5677660 SPC_0908 SPC_0909     FALSE 0.003 464.000 0.000 NA   NA
 5677663 5677664 SPC_0912 SPC_0913 ybjC nfsA TRUE 0.967 -16.000 0.159 NA   NA
 5677664 5677665 SPC_0913 SPC_0914 nfsA rimK FALSE 0.454 58.000 0.114 1.000 N NA
 5677665 5677666 SPC_0914 SPC_0915 rimK ybjN FALSE 0.417 97.000 0.161 NA   NA
 5677666 5677667 SPC_0915 SPC_0916 ybjN potF FALSE 0.009 319.000 0.000 NA   NA
 5677667 5677668 SPC_0916 SPC_0917 potF potG TRUE 0.943 88.000 0.679 1.000 Y NA
 5677668 5677669 SPC_0917 SPC_0918 potG potH TRUE 0.996 10.000 0.857 1.000 Y NA
 5677669 5677670 SPC_0918 SPC_0919 potH potI TRUE 0.999 -3.000 0.528 0.049 Y NA
 5677670 5677671 SPC_0919 SPC_0920 potI ybjO TRUE 0.981 -16.000 0.264 NA   NA
 5677671 5677672 SPC_0920 SPC_0921 ybjO ybjF TRUE 0.737 43.000 0.226 NA   NA
 5677672 5677673 SPC_0921 SPC_0922 ybjF   FALSE 0.131 146.000 0.000 NA   NA
 5677673 5677674 SPC_0922 SPC_0923   ulaA TRUE 0.806 9.000 0.000 NA   NA
 5677674 5677675 SPC_0923 SPC_0924 ulaA   TRUE 0.916 87.000 0.800 0.017   NA
 5677675 5677676 SPC_0924 SPC_0925     TRUE 0.983 10.000 0.800 1.000 N NA
 5677677 5677678 SPC_0926 SPC_0927 artJ artM FALSE 0.416 237.000 0.143 0.049 Y NA
 5677678 5677679 SPC_0927 SPC_0928 artM artQ TRUE 0.999 0.000 0.714 0.016 Y NA
 5677679 5677680 SPC_0928 SPC_0929 artQ artI TRUE 0.995 7.000 0.260 0.049 Y NA
 5677680 5677681 SPC_0929 SPC_0930 artI artP TRUE 0.986 12.000 0.323 1.000 Y NA
 5677681 5677682 SPC_0930 SPC_0931 artP ybjP FALSE 0.042 224.000 0.081 NA   NA
 5677683 5677684 SPC_0932 SPC_0933   ybjR TRUE 0.893 -3.000 0.037 NA   NA
 5677685 5677686 SPC_0934 SPC_0935   ybjT TRUE 0.816 96.000 0.022 0.007 Y NA
 5677686 5677687 SPC_0935 SPC_0936 ybjT ybjU TRUE 0.770 11.000 0.074 1.000 N NA
 5677687 5677688 SPC_0936 SPC_0937 ybjU poxB TRUE 0.855 39.000 0.041 1.000 Y NA
 5677688 5677689 SPC_0937 SPC_0938 poxB hcr FALSE 0.042 158.000 0.025 1.000 N NA
 5677689 5677690 SPC_0938 SPC_0939 hcr hcp TRUE 0.923 45.000 0.000 0.016 Y NA
 5677690 5677691 SPC_0939 SPC_0940 hcp ybjE FALSE 0.137 144.000 0.000 NA   NA
 5677694 5677695 SPC_0943 SPC_0944 ybjY ybjZ TRUE 0.928 -3.000 0.000 NA   NA
 5677697 5677698 SPC_0946 SPC_0947 clpS clpA TRUE 0.830 64.000 0.596 NA   NA
 5677699 5677700 SPC_0948 SPC_0949     FALSE 0.096 162.000 0.000 NA   NA
 5677700 5677701 SPC_0949 SPC_t017     FALSE 0.004 429.000 0.000 NA   NA
 5677701 5677702 SPC_t017 SPC_0950     FALSE 0.125 149.000 0.000 NA   NA
 5677702 5677703 SPC_0950 SPC_0951     TRUE 0.888 20.000 0.333 NA   NA
 5677705 5677706 SPC_0953 SPC_0954 infA   TRUE 0.899 -72.000 0.000 NA   NA
 5677706 5677707 SPC_0954 SPC_0955   aat TRUE 0.898 1.000 0.000 NA   NA
 5677707 5677708 SPC_0955 SPC_0956 aat cydC TRUE 0.843 45.000 0.049 1.000 Y NA
 5677708 5677709 SPC_0956 SPC_0957 cydC cydD TRUE 0.999 1.000 0.631 0.006 Y NA
 5677709 5677710 SPC_0957 SPC_0958 cydD trxB TRUE 0.643 114.000 0.049 1.000 Y NA
 5677711 5677712 SPC_0959 SPC_0960 lrp ftsK TRUE 0.656 78.000 0.345 1.000 N NA
 5677712 5677713 SPC_0960 SPC_0961 ftsK lolA FALSE 0.477 140.000 0.305 1.000 N NA
 5677713 5677714 SPC_0961 SPC_0962 lolA ycaJ TRUE 0.909 10.000 0.167 1.000 N NA
 5677714 5677715 SPC_0962 SPC_0963 ycaJ serS FALSE 0.059 259.000 0.078 0.090 N NA
 5677715 5677716 SPC_0963 SPC_0964 serS dmsA FALSE 0.021 237.000 0.000 1.000 N NA
 5677716 5677717 SPC_0964 SPC_0965 dmsA dmsB TRUE 0.990 11.000 0.172 0.050 Y NA
 5677717 5677718 SPC_0965 SPC_0966 dmsB dmsC TRUE 0.923 2.000 0.000 1.000   NA
 5677718 5677719 SPC_0966 SPC_0967 dmsC ycaD FALSE 0.007 350.000 0.000 NA   NA
 5677719 5677720 SPC_0967 SPC_0968 ycaD ycaM FALSE 0.016 218.000 0.000 NA N NA
 5677722 5677723 SPC_0970 SPC_0971   sopD2 FALSE 0.014 284.000 0.000 NA   NA
 5677724 5677725 SPC_0972 SPC_0973 pflB focA TRUE 0.725 60.000 0.345 1.000 N NA
 5677725 5677726 SPC_0973 SPC_0974 focA ycaO FALSE 0.005 405.000 0.000 NA   NA
 5677727 5677728 SPC_0975 SPC_0976 ycaP serC FALSE 0.026 186.000 0.014 NA   NA
 5677728 5677729 SPC_0976 SPC_0977 serC aroA TRUE 0.741 66.000 0.033 1.000 Y NA
 5677729 5677730 SPC_0977 SPC_0978 aroA ycaL FALSE 0.036 143.000 0.003 1.000 N NA
 5677730 5677731 SPC_0978 SPC_0979 ycaL cmk FALSE 0.020 173.000 0.004 1.000 N NA
 5677731 5677732 SPC_0979 SPC_0980 cmk rpsA TRUE 0.504 114.000 0.281 1.000 N NA
 5677732 5677733 SPC_0980 SPC_0981 rpsA himD FALSE 0.381 156.000 0.292 1.000 N NA
 5677733 5677734 SPC_0981 SPC_0982 himD   FALSE 0.231 113.000 0.000 1.000   NA
 5677734 5677735 SPC_0982 SPC_0983     TRUE 0.501 171.000 0.476 1.000   NA
 5677735 5677736 SPC_0983 SPC_0984     FALSE 0.075 177.000 0.000 NA   NA
 5677736 5677737 SPC_0984 SPC_0985   msbA FALSE 0.436 37.000 0.000 NA   NA
 5677737 5677738 SPC_0985 SPC_0986 msbA lpxK TRUE 0.978 -3.000 0.205 1.000 N NA
 5677738 5677739 SPC_0986 SPC_0987 lpxK ycaQ FALSE 0.221 44.000 0.017 NA   NA
 5677739 5677740 SPC_0987 SPC_0988 ycaQ   FALSE 0.185 52.000 0.016 NA   NA
 5677740 5677741 SPC_0988 SPC_0989   kdsB TRUE 0.984 -3.000 0.265 NA   NA
 5677741 5677742 SPC_0989 SPC_0990 kdsB   FALSE 0.019 211.000 0.023 NA   NA
 5677744 5677745 SPC_0992 SPC_0993 smtA mukF TRUE 0.983 -7.000 0.325 NA N NA
 5677745 5677746 SPC_0993 SPC_0994 mukF mukE TRUE 0.985 -19.000 0.036 NA Y NA
 5677746 5677747 SPC_0994 SPC_0995 mukE mukB TRUE 0.996 0.000 0.000 0.001 Y NA
 5677747 5677748 SPC_0995 SPC_0996 mukB ycbB FALSE 0.022 273.000 0.000 1.000   NA
 5677748 5677749 SPC_0996 SPC_0997 ycbB ycbK FALSE 0.119 260.000 0.372 NA   NA
 5677749 5677750 SPC_0997 SPC_0998 ycbK ycbL TRUE 0.613 28.000 0.089 NA   NA
 5677751 5677752 SPC_0999 SPC_1000 aspC ompF FALSE 0.056 185.000 0.060 1.000 N NA
 5677752 5677753 SPC_1000 SPC_1001 ompF asnS FALSE 0.002 607.000 0.000 1.000 N NA
 5677753 5677754 SPC_1001 SPC_1002 asnS   FALSE 0.011 201.000 0.005 1.000 N NA
 5677755 5677756 SPC_1003 SPC_1004     FALSE 0.248 74.000 0.000 NA   NA
 5677756 5677757 SPC_1004 SPC_1005     TRUE 0.661 14.000 0.000 NA   NA
 5677758 5677759 SPC_1006 SPC_1007 pncB int FALSE 0.043 195.000 0.000 1.000 N NA
 5677759 5677760 SPC_1007 SPC_1008 int xis TRUE 0.864 45.000 0.500 NA   NA
 5677760 5677761 SPC_1008 SPC_1009 xis   FALSE 0.412 41.000 0.000 NA   NA
 5677761 5677762 SPC_1009 SPC_1010     FALSE 0.433 76.000 0.130 NA   NA
 5677762 5677763 SPC_1010 SPC_1011     TRUE 0.747 11.000 0.000 NA   NA
 5677763 5677764 SPC_1011 SPC_1012     FALSE 0.166 127.000 0.000 NA   NA
 5677766 5677767 SPC_1014 SPC_1015     TRUE 0.928 -3.000 0.000 NA   NA
 5677767 5677768 SPC_1015 SPC_1016     FALSE 0.013 289.000 0.000 NA   NA
 5677769 5677770 SPC_1017 SPC_1018     FALSE 0.205 92.000 0.000 NA   NA
 5677770 5677771 SPC_1018 SPC_1019     FALSE 0.277 87.000 0.000 1.000   NA
 5677771 5677772 SPC_1019 SPC_1020     TRUE 0.661 14.000 0.000 NA   NA
 5677772 5677773 SPC_1020 SPC_1021     FALSE 0.197 99.000 0.000 NA   NA
 5677773 5677774 SPC_1021 SPC_1022     FALSE 0.109 156.000 0.000 NA   NA
 5677774 5677775 SPC_1022 SPC_1023     FALSE 0.021 249.000 0.000 NA   NA
 5677775 5677776 SPC_1023 SPC_1024     FALSE 0.447 35.000 0.000 NA   NA
 5677776 5677777 SPC_1024 SPC_1025     TRUE 0.911 0.000 0.000 NA   NA
 5677777 5677778 SPC_1025 SPC_1026     TRUE 0.883 3.000 0.000 NA   NA
 5677778 5677779 SPC_1026 SPC_1027     FALSE 0.159 133.000 0.000 NA   NA
 5677780 5677781 SPC_1028 SPC_1029     FALSE 0.006 361.000 0.000 NA   NA
 5677782 5677783 SPC_1030 SPC_1031     TRUE 0.903 -28.000 0.000 NA   NA
 5677783 5677784 SPC_1031 SPC_1032     TRUE 0.948 -3.000 0.000 1.000   NA
 5677784 5677785 SPC_1032 SPC_1033     FALSE 0.033 218.000 0.000 NA   NA
 5677785 5677786 SPC_1033 SPC_1034     FALSE 0.289 63.000 0.000 NA   NA
 5677786 5677787 SPC_1034 SPC_1035     TRUE 0.747 11.000 0.000 NA   NA
 5677787 5677788 SPC_1035 SPC_1036     FALSE 0.455 33.000 0.000 NA   NA
 5677788 5677789 SPC_1036 SPC_1037     TRUE 0.661 14.000 0.000 NA   NA
 5677789 5677790 SPC_1037 SPC_1038     TRUE 0.637 15.000 0.000 NA   NA
 5677790 5677791 SPC_1038 SPC_1039     TRUE 0.508 26.000 0.000 NA   NA
 5677791 5677792 SPC_1039 SPC_1040     TRUE 0.710 12.000 0.000 NA   NA
 5677792 5677793 SPC_1040 SPC_1041     FALSE 0.404 42.000 0.000 NA   NA
 5677793 5677794 SPC_1041 SPC_1042     TRUE 0.902 -34.000 0.000 NA   NA
 5677794 5677795 SPC_1042 SPC_1043     TRUE 0.928 -3.000 0.000 NA   NA
 5677795 5677796 SPC_1043 SPC_1044     FALSE 0.257 71.000 0.000 NA   NA
 5677796 5677797 SPC_1044 SPC_1045     TRUE 0.906 -25.000 0.000 NA   NA
 5677797 5677798 SPC_1045 SPC_1046     TRUE 0.862 4.000 0.000 NA   NA
 5677798 5677799 SPC_1046 SPC_1047     TRUE 0.682 13.000 0.000 NA   NA
 5677799 5677800 SPC_1047 SPC_1048     TRUE 0.862 4.000 0.000 NA   NA
 5677800 5677801 SPC_1048 SPC_1049     FALSE 0.072 178.000 0.000 NA   NA
 5677801 5677802 SPC_1049 SPC_1050     TRUE 0.911 0.000 0.000 NA   NA
 5677802 5677803 SPC_1050 SPC_1051     TRUE 0.862 4.000 0.000 NA   NA
 5677803 5677804 SPC_1051 SPC_1052     TRUE 0.883 3.000 0.000 NA   NA
 5677804 5677805 SPC_1052 SPC_1053     TRUE 0.928 -3.000 0.000 NA   NA
 5677807 5677808 SPC_1055 SPC_1056     TRUE 0.947 -10.000 0.087 NA   NA
 5677808 5677809 SPC_1056 SPC_1057     TRUE 0.787 65.000 0.087 NA Y NA
 5677809 5677810 SPC_1057 SPC_1058     FALSE 0.284 64.000 0.000 NA   NA
 5677810 5677811 SPC_1058 SPC_1059     FALSE 0.155 136.000 0.000 NA   NA
 5677811 5677812 SPC_1059 SPC_1060     TRUE 0.798 13.000 0.100 NA   NA
 5677812 5677813 SPC_1060 SPC_1061     TRUE 0.995 -3.000 0.792 NA   NA
 5677813 5677814 SPC_1061 SPC_1062   pin TRUE 0.911 -18.000 0.000 NA   NA
 5677814 5677815 SPC_1062 SPC_1063 pin   TRUE 0.990 7.000 1.000 NA   NA
 5677816 5677817 SPC_1064 SPC_1065   gogB FALSE 0.021 251.000 0.000 NA   NA
 5677818 5677819 SPC_1066 SPC_1067 lepA lepB TRUE 0.858 17.000 0.187 1.000   NA
 5677819 5677820 SPC_1067 SPC_1068 lepB rncS FALSE 0.086 217.000 0.117 1.000   NA
 5677820 5677821 SPC_1068 SPC_1069 rncS era TRUE 0.988 -3.000 0.127 0.050   NA
 5677821 5677822 SPC_1069 SPC_1070 era recO TRUE 0.862 12.000 0.109 1.000   NA
 5677822 5677823 SPC_1070 SPC_1071 recO pdxJ TRUE 0.866 12.000 0.166 1.000 N NA
 5677823 5677824 SPC_1071 SPC_1072 pdxJ acpS TRUE 0.983 0.000 0.326 1.000 N NA
 5677825 5677826 SPC_1073 SPC_1074 yfhL   FALSE 0.429 38.000 0.000 NA   NA
 5677827 5677828 SPC_1075 SPC_1076     FALSE 0.365 22.000 0.000 NA N NA
 5677830 5677831 SPC_1078 SPC_1079     TRUE 0.894 11.000 0.125 1.000   NA
 5677831 5677832 SPC_1079 SPC_1080   yfhB TRUE 0.906 4.000 0.125 NA N NA
 5677832 5677833 SPC_1080 SPC_1081 yfhB yfhC FALSE 0.378 25.000 0.062 NA N NA
 5677834 5677835 SPC_1082 SPC_1083   yfhD TRUE 0.911 -18.000 0.000 NA   NA
 5677835 5677836 SPC_1083 SPC_1084 yfhD   TRUE 0.787 1.000 0.013 NA   NA
 5677837 5677838 SPC_1085 SPC_1086 purG yfhK FALSE 0.002 493.000 0.000 1.000 N NA
 5677838 5677839 SPC_1086 SPC_1087 yfhK   FALSE 0.231 80.000 0.000 NA   NA
 5677839 5677840 SPC_1087 SPC_1088   yfhA TRUE 0.928 -3.000 0.000 NA   NA
 5677840 5677841 SPC_1088 SPC_1089 yfhA glnB FALSE 0.426 77.000 0.146 1.000 N NA
 5677842 5677843 SPC_1090 SPC_1091 yjdL cadA TRUE 0.944 56.000 0.400 1.000 Y NA
 5677843 5677844 SPC_1091 SPC_1092 cadA cadB TRUE 0.725 83.000 0.000 1.000 Y NA
 5677844 5677845 SPC_1092 SPC_1093 cadB cadC FALSE 0.006 343.000 0.000 1.000 N NA
 5677845 5677846 SPC_1093 SPC_1094 cadC hmpA FALSE 0.057 181.000 0.000 1.000 N NA
 5677847 5677848 SPC_1095 SPC_1096   glyA TRUE 0.516 15.000 0.033 NA   NA
 5677848 5677849 SPC_1096 SPC_1097 glyA hcaT FALSE 0.057 196.000 0.044 1.000   NA
 5677851 5677852 SPC_1099 SPC_1100     TRUE 0.969 -9.000 0.150 NA   NA
 5677853 5677854 SPC_1101 SPC_1102 asrC asrB TRUE 0.997 11.000 0.636 0.027 Y NA
 5677854 5677855 SPC_1102 SPC_1103 asrB asrA TRUE 0.990 4.000 0.318 0.027   NA
 5677855 5677856 SPC_1103 SPC_1104 asrA   FALSE 0.168 149.000 0.000 1.000   NA
 5677856 5677857 SPC_1104 SPC_1105   suhB FALSE 0.095 145.000 0.003 1.000   NA
 5677858 5677859 SPC_1106 SPC_1107   yfhP FALSE 0.187 159.000 0.126 1.000 N NA
 5677859 5677860 SPC_1107 SPC_1108 yfhP nifS FALSE 0.360 181.000 0.424 1.000 N NA
 5677860 5677861 SPC_1108 SPC_1109 nifS nifU TRUE 0.889 28.000 0.448 1.000 N NA
 5677861 5677862 SPC_1109 SPC_1110 nifU iscA TRUE 0.955 29.000 0.359 0.002   NA
 5677862 5677863 SPC_1110 SPC_1111 iscA hscB FALSE 0.384 196.000 0.500 1.000   NA
 5677863 5677864 SPC_1111 SPC_1112 hscB hscA TRUE 0.992 13.000 0.634 1.000 Y NA
 5677864 5677865 SPC_1112 SPC_1113 hscA fdx TRUE 0.993 2.000 0.794 1.000 N NA
 5677865 5677866 SPC_1113 SPC_1114 fdx yfhJ TRUE 0.974 12.000 0.625 1.000   NA
 5677866 5677867 SPC_1114 SPC_1115 yfhJ yfhI FALSE 0.229 178.000 0.171 1.000   NA
 5677867 5677868 SPC_1115 SPC_1116 yfhI sseB TRUE 0.520 107.000 0.253 NA   NA
 5677868 5677869 SPC_1116 SPC_1117 sseB   FALSE 0.005 386.000 0.000 NA   NA
 5677872 5677873 SPC_1120 SPC_1121   sseA TRUE 0.610 16.000 0.000 NA   NA
 5677874 5677875 SPC_1122 SPC_1123   pbpC TRUE 0.994 1.000 0.711 1.000   NA
 5677875 5677876 SPC_1123 SPC_1124 pbpC   FALSE 0.116 156.000 0.070 1.000 N NA
 5677876 5677877 SPC_1124 SPC_1125     TRUE 0.999 -3.000 0.857 0.049 Y NA
 5677877 5677878 SPC_1125 SPC_1126     TRUE 0.995 -7.000 0.667 1.000   NA
 5677878 5677879 SPC_1126 SPC_1127     TRUE 0.972 0.000 0.154 1.000   NA
 5677879 5677880 SPC_1127 SPC_1128   ndk FALSE 0.044 121.000 0.002 1.000 N NA
 5677880 5677881 SPC_1128 SPC_1129 ndk yfgB FALSE 0.128 207.000 0.156 1.000   NA
 5677881 5677882 SPC_1129 SPC_1130 yfgB yfgA FALSE 0.010 292.000 0.020 1.000   NA
 5677882 5677883 SPC_1130 SPC_1131 yfgA gcpE TRUE 0.602 84.000 0.233 1.000   NA
 5677883 5677884 SPC_1131 SPC_1132 gcpE hisS FALSE 0.427 111.000 0.207 1.000 N NA
 5677884 5677885 SPC_1132 SPC_1133 hisS yfgM TRUE 0.918 14.000 0.259 1.000   NA
 5677885 5677886 SPC_1133 SPC_1134 yfgM yfgL TRUE 0.947 16.000 0.492 1.000   NA
 5677886 5677887 SPC_1134 SPC_1135 yfgL engA FALSE 0.479 119.000 0.203 1.000   NA
 5677887 5677888 SPC_1135 SPC_1136 engA yfgJ FALSE 0.094 89.000 0.009 NA   NA
 5677888 5677889 SPC_1136 SPC_1137 yfgJ sinH FALSE 0.005 382.000 0.000 NA   NA
 5677889 5677890 SPC_1137 SPC_1138 sinH sinI TRUE 0.822 58.000 0.500 NA   NA
 5677890 5677891 SPC_1138 SPC_1139 sinI ratA FALSE 0.453 138.000 0.250 NA   NA
 5677891 5677892 SPC_1139 SPC_1140 ratA   FALSE 0.089 166.000 0.000 NA   NA
 5677892 5677893 SPC_1140 SPC_1141   ratB FALSE 0.206 91.000 0.000 NA   NA
 5677893 5677894 SPC_1141 SPC_1142 ratB shdA FALSE 0.002 702.000 0.000 NA   NA
 5677896 5677897 SPC_1144 SPC_1145 guaB guaA TRUE 0.948 70.000 0.190 0.001 Y NA
 5677897 5677898 SPC_1145 SPC_1146 guaA int FALSE 0.010 305.000 0.000 NA   NA
 5677898 5677899 SPC_1146 SPC_1147 int   FALSE 0.202 95.000 0.000 NA   NA
 5677899 5677900 SPC_1147 SPC_1148     FALSE 0.004 421.000 0.000 NA   NA
 5677904 5677905 SPC_1152 SPC_1153     FALSE 0.010 305.000 0.000 NA   NA
 5677906 5677907 SPC_1154 SPC_1155 ppx ppk TRUE 0.996 5.000 0.486 1.000 Y NA
 5677907 5677908 SPC_1155 SPC_1156 ppk purN FALSE 0.018 189.000 0.017 1.000 N NA
 5677908 5677909 SPC_1156 SPC_1157 purN purM TRUE 0.998 0.000 0.230 0.002 Y NA
 5677909 5677910 SPC_1157 SPC_1158 purM   FALSE 0.447 35.000 0.000 NA   NA
 5677911 5677912 SPC_1159 SPC_1160 upp uraA TRUE 0.768 88.000 0.101 1.000 Y NA
 5677912 5677913 SPC_1160 SPC_1161 uraA yfgE FALSE 0.109 71.000 0.048 NA N NA
 5677914 5677915 SPC_1162 SPC_1163 yfgD   TRUE 0.805 40.000 0.259 1.000   NA
 5677916 5677917 SPC_1164 SPC_1165     FALSE 0.011 301.000 0.000 NA   NA
 5677917 5677918 SPC_1165 SPC_1166     TRUE 0.711 47.000 0.290 NA N NA
 5677918 5677919 SPC_1166 SPC_1167     TRUE 0.992 6.000 0.295 1.000 Y NA
 5677920 5677921 SPC_1168 SPC_1169 bcp gcvR TRUE 0.925 0.000 0.102 NA N NA
 5677922 5677923 SPC_1170 SPC_1171 dapA nlpB TRUE 0.968 17.000 0.267 NA Y NA
 5677923 5677924 SPC_1171 SPC_1172 nlpB purC FALSE 0.004 175.000 0.019 NA N NA
 5677924 5677925 SPC_1172 SPC_1173 purC   FALSE 0.070 125.000 0.006 NA   NA
 5677925 5677926 SPC_1173 SPC_1174   ypfI FALSE 0.468 16.000 0.029 NA   NA
 5677927 5677928 SPC_1175 SPC_1176   dapE FALSE 0.332 28.000 0.025 NA   NA
 5677928 5677929 SPC_1176 SPC_1177 dapE yffB TRUE 0.969 4.000 0.292 1.000 N NA
 5677931 5677932 SPC_1179 SPC_1180 acrD narQ FALSE 0.062 185.000 0.000 NA   NA
 5677935 5677936 SPC_1183 SPC_1184 yffH ypfG TRUE 0.560 125.000 0.333 NA   NA
 5677936 5677937 SPC_1184 SPC_1185 ypfG   FALSE 0.165 128.000 0.000 NA   NA
 5677938 5677939 SPC_1186 SPC_1187 tktB talA TRUE 0.988 20.000 0.739 1.000 Y NA
 5677939 5677940 SPC_1187 SPC_1188 talA   FALSE 0.394 70.000 0.100 NA   NA
 5677941 5677942 SPC_1189 SPC_1190 maeB eutS FALSE 0.004 417.000 0.070 1.000 N NA
 5677942 5677943 SPC_1190 SPC_1191 eutS eutP TRUE 0.977 4.000 0.009 1.000 Y NA
 5677943 5677944 SPC_1191 SPC_1192 eutP eutQ TRUE 0.983 -22.000 0.009 NA Y NA
 5677944 5677945 SPC_1192 SPC_1193 eutQ eutT TRUE 0.996 -3.000 0.214 NA Y NA
 5677945 5677946 SPC_1193 SPC_1194 eutT eutD TRUE 0.896 -3.000 0.048 1.000 N NA
 5677946 5677947 SPC_1194 SPC_1195 eutD eutN FALSE 0.412 41.000 0.000 NA   NA
 5677947 5677948 SPC_1195 SPC_1196 eutN eutE TRUE 0.710 12.000 0.000 NA   NA
 5677948 5677949 SPC_1196 SPC_1197 eutE eutJ TRUE 0.712 11.000 0.000 1.000 N NA
 5677949 5677950 SPC_1197 SPC_1198 eutJ eutG TRUE 0.905 -10.000 0.000 1.000 N NA
 5677950 5677951 SPC_1198 SPC_1199 eutG eutH FALSE 0.437 120.000 0.222 1.000 N NA
 5677951 5677952 SPC_1199 SPC_1200 eutH eutA TRUE 0.990 -3.000 0.000 NA Y NA
 5677952 5677953 SPC_1200 SPC_1201 eutA eutB TRUE 0.950 12.000 0.000 NA Y NA
 5677953 5677954 SPC_1201 SPC_1202 eutB eutC TRUE 0.972 19.000 0.000 0.001 Y NA
 5677954 5677955 SPC_1202 SPC_1203 eutC eutL TRUE 0.821 49.000 0.043 1.000 Y NA
 5677955 5677956 SPC_1203 SPC_1204 eutL eutK TRUE 0.515 13.000 0.000 NA N NA
 5677956 5677957 SPC_1204 SPC_1205 eutK yfeG FALSE 0.223 48.000 0.000 NA N NA
 5677958 5677959 SPC_1206 SPC_1207   hemF TRUE 0.546 21.000 0.000 NA   NA
 5677959 5677960 SPC_1207 SPC_1208 hemF amiA TRUE 0.739 3.000 0.025 1.000 N NA
 5677961 5677962 SPC_1209 SPC_1210   yfeZ TRUE 0.920 -13.000 0.059 NA   NA
 5677962 5677963 SPC_1210 SPC_1211 yfeZ   TRUE 0.605 62.000 0.204 NA   NA
 5677963 5677964 SPC_1211 SPC_1212     TRUE 0.616 95.000 0.333 NA   NA
 5677964 5677965 SPC_1212 SPC_1213   yfeF FALSE 0.011 248.000 0.000 NA N NA
 5677965 5677966 SPC_1213 SPC_1214 yfeF cysP FALSE 0.088 158.000 0.000 1.000 N NA
 5677966 5677967 SPC_1214 SPC_1215 cysP cysU TRUE 0.996 0.000 0.479 0.002 N NA
 5677967 5677968 SPC_1215 SPC_1216 cysU cysW TRUE 0.997 0.000 0.583 0.001 N NA
 5677968 5677969 SPC_1216 SPC_1217 cysW cysA TRUE 0.995 -10.000 0.180 1.000 Y NA
 5677969 5677970 SPC_1217 SPC_1218 cysA cysM FALSE 0.202 68.000 0.049 1.000 N NA
 5677970 5677971 SPC_1218 SPC_1219 cysM   TRUE 0.565 19.000 0.000 NA   NA
 5677972 5677973 SPC_1220 SPC_1221 yfeL   TRUE 0.682 13.000 0.000 NA   NA
 5677973 5677974 SPC_1221 SPC_1222   yfeJ FALSE 0.306 59.000 0.000 NA   NA
 5677974 5677975 SPC_1222 SPC_1223 yfeJ ptsJ TRUE 0.606 15.000 0.059 1.000 N NA
 5677976 5677977 SPC_1224 SPC_1225 pdxK   TRUE 0.973 -3.000 0.160 NA   NA
 5677978 5677979 SPC_1226 SPC_1227 crr ptsI TRUE 0.966 41.000 0.203 0.010 Y NA
 5677979 5677980 SPC_1227 SPC_1228 ptsI ptsH TRUE 0.957 49.000 0.187 0.010 Y NA
 5677982 5677983 SPC_1230 SPC_1231 cysK   FALSE 0.121 312.000 0.122 1.000 Y NA
 5677984 5677985 SPC_1232 SPC_1233 zipA ligA FALSE 0.369 72.000 0.106 1.000 N NA
 5677985 5677986 SPC_1233 SPC_1234 ligA ypeB TRUE 0.790 2.000 0.017 NA   NA
 5677990 5677991 SPC_1238 SPC_1239 xapA xapB TRUE 0.559 55.000 0.111 1.000   NA
 5677991 5677992 SPC_1239 SPC_1240 xapB   TRUE 0.646 59.000 0.222 NA   NA
 5677992 5677993 SPC_1240 SPC_1241   xapR FALSE 0.449 52.000 0.087 NA   NA
 5677994 5677995 SPC_t018 SPC_t019     TRUE 0.845 5.000 0.000 NA   NA
 5677995 5677996 SPC_t019 SPC_t020     FALSE 0.404 42.000 0.000 NA   NA
 5677996 5677997 SPC_t020 SPC_t021     FALSE 0.379 46.000 0.000 NA   NA
 5677999 5678000 SPC_1243 SPC_1244 yfeD yfeC TRUE 0.992 2.000 0.250 0.005   NA
 5678001 5678002 SPC_t022 SPC_t023     FALSE 0.397 43.000 0.000 NA   NA
 5678002 5678003 SPC_t023 SPC_1245   yfeA FALSE 0.006 360.000 0.000 NA   NA
 5678006 5678007 SPC_1248 SPC_1249 ypeC   FALSE 0.455 114.000 0.214 NA   NA
 5678010 5678011 SPC_1252 SPC_1253 glk yfdZ FALSE 0.002 723.000 0.000 1.000 N NA
 5678011 5678012 SPC_1253 SPC_1254 yfdZ   FALSE 0.004 586.000 0.000 1.000   NA
 5678012 5678013 SPC_1254 SPC_1255     TRUE 0.501 171.000 0.476 1.000   NA
 5678015 5678016 SPC_1257 SPC_1258     FALSE 0.098 161.000 0.000 NA   NA
 5678018 5678019 SPC_1260 SPC_1261 pgtC pgtB TRUE 0.996 -3.000 0.909 1.000 N NA
 5678019 5678020 SPC_1261 SPC_1262 pgtB pgtA TRUE 0.999 -10.000 0.500 0.087 Y NA
 5678020 5678021 SPC_1262 SPC_1263 pgtA pgtE FALSE 0.014 268.000 0.000 1.000 N NA
 5678022 5678023 SPC_1264 SPC_1265     FALSE 0.008 338.000 0.000 NA   NA
 5678023 5678024 SPC_1265 SPC_1266     FALSE 0.003 469.000 0.000 NA   NA
 5678024 5678025 SPC_1266 SPC_1267     TRUE 0.928 -3.000 0.000 NA   NA
 5678025 5678026 SPC_1267 SPC_1268     TRUE 0.928 -3.000 0.000 NA   NA
 5678026 5678027 SPC_1268 SPC_1269     FALSE 0.131 146.000 0.000 NA   NA
 5678029 5678030 SPC_1271 SPC_1272   exoD FALSE 0.060 186.000 0.000 NA   NA
 5678030 5678031 SPC_1272 SPC_1273 exoD   FALSE 0.025 263.000 0.000 1.000   NA
 5678031 5678032 SPC_1273 SPC_1274     TRUE 0.947 25.000 0.667 1.000   NA
 5678032 5678033 SPC_1274 SPC_1275     FALSE 0.163 130.000 0.000 NA   NA
 5678033 5678034 SPC_1275 SPC_1276   rpc TRUE 0.899 -52.000 0.000 NA   NA
 5678034 5678035 SPC_1276 SPC_1277 rpc   FALSE 0.261 70.000 0.000 NA   NA
 5678035 5678036 SPC_1277 SPC_1278     FALSE 0.024 239.000 0.000 NA   NA
 5678036 5678037 SPC_1278 SPC_1279     FALSE 0.002 787.000 0.000 NA   NA
 5678038 5678039 SPC_1280 SPC_1281   cro FALSE 0.004 449.000 0.000 NA   NA
 5678039 5678040 SPC_1281 SPC_1282 cro   FALSE 0.044 202.000 0.000 NA   NA
 5678040 5678041 SPC_1282 SPC_1283     TRUE 0.538 22.000 0.000 NA   NA
 5678041 5678042 SPC_1283 SPC_1284     FALSE 0.002 806.000 0.000 NA   NA
 5678042 5678043 SPC_1284 SPC_1285     FALSE 0.120 151.000 0.000 NA   NA
 5678045 5678046 SPC_1287 SPC_1288   rusA FALSE 0.020 256.000 0.000 NA   NA
 5678046 5678047 SPC_1288 SPC_1289 rusA   TRUE 0.500 27.000 0.000 NA   NA
 5678047 5678048 SPC_1289 SPC_1290   ninZ TRUE 0.910 -19.000 0.000 NA   NA
 5678048 5678049 SPC_1290 SPC_1291 ninZ   FALSE 0.009 324.000 0.000 NA   NA
 5678049 5678050 SPC_1291 SPC_t024     FALSE 0.289 63.000 0.000 NA   NA
 5678050 5678051 SPC_t024 SPC_t025     TRUE 0.833 6.000 0.000 NA   NA
 5678051 5678052 SPC_t025 SPC_1292     FALSE 0.021 249.000 0.000 NA   NA
 5678052 5678053 SPC_1292 SPC_1293     TRUE 0.975 -13.000 0.200 NA   NA
 5678053 5678054 SPC_1293 SPC_1294     TRUE 0.948 -3.000 0.000 1.000   NA
 5678054 5678055 SPC_1294 SPC_1295     FALSE 0.005 387.000 0.000 NA   NA
 5678055 5678056 SPC_1295 SPC_1296     FALSE 0.004 443.000 0.000 NA   NA
 5678056 5678057 SPC_1296 SPC_1297     FALSE 0.004 443.000 0.000 NA   NA
 5678057 5678058 SPC_1297 SPC_1298     TRUE 0.894 2.000 0.000 NA   NA
 5678058 5678059 SPC_1298 SPC_1299     TRUE 0.506 91.000 0.214 NA   NA
 5678059 5678060 SPC_1299 SPC_1300     TRUE 0.597 19.000 0.065 NA   NA
 5678060 5678061 SPC_1300 SPC_1301     FALSE 0.363 54.000 0.065 NA   NA
 5678061 5678062 SPC_1301 SPC_1302     FALSE 0.004 452.000 0.000 NA   NA
 5678062 5678063 SPC_1302 SPC_1303     TRUE 0.971 4.000 0.286 NA   NA
 5678063 5678064 SPC_1303 SPC_1304     TRUE 0.994 0.000 0.750 NA   NA
 5678064 5678065 SPC_1304 SPC_1305     TRUE 0.990 3.000 0.600 NA   NA
 5678065 5678066 SPC_1305 SPC_1306     TRUE 0.959 10.000 0.333 NA   NA
 5678066 5678067 SPC_1306 SPC_1307     TRUE 0.968 0.000 0.167 NA   NA
 5678070 5678071 SPC_1310 SPC_1311     FALSE 0.442 36.000 0.000 NA   NA
 5678071 5678072 SPC_1311 SPC_t026     FALSE 0.002 1213.000 0.000 NA   NA
 5678072 5678073 SPC_t026 SPC_1312   yfdC FALSE 0.244 76.000 0.000 NA   NA
 5678076 5678077 SPC_1315 SPC_1316 yfcZ yfcY FALSE 0.078 178.000 0.061 NA   NA
 5678077 5678078 SPC_1316 SPC_1317 yfcY yfcX TRUE 0.979 21.000 0.430 1.000 Y NA
 5678078 5678079 SPC_1317 SPC_1318 yfcX sixA FALSE 0.033 209.000 0.000 1.000 N NA
 5678081 5678082 SPC_1320 SPC_1321 yfcB aroC TRUE 0.513 33.000 0.081 1.000 N NA
 5678082 5678083 SPC_1321 SPC_1322 aroC mepA TRUE 0.700 4.000 0.025 1.000 N NA
 5678083 5678084 SPC_1322 SPC_1323 mepA yfcA TRUE 0.973 0.000 0.160 1.000   NA
 5678084 5678085 SPC_1323 SPC_1324 yfcA yfcM TRUE 0.965 0.000 0.153 NA   NA
 5678085 5678086 SPC_1324 SPC_1325 yfcM yfcL TRUE 0.875 33.000 0.425 NA   NA
 5678088 5678089 SPC_1327 SPC_1328 fabB   FALSE 0.198 98.000 0.000 NA   NA
 5678090 5678091 SPC_1329 SPC_1330     TRUE 0.911 0.000 0.000 NA   NA
 5678091 5678092 SPC_1330 SPC_1331     FALSE 0.155 136.000 0.000 NA   NA
 5678093 5678094 SPC_1332 SPC_1333     FALSE 0.069 180.000 0.000 NA   NA
 5678096 5678097 SPC_1335 SPC_1336 pdxB usg TRUE 0.909 68.000 0.097 0.009 Y NA
 5678097 5678098 SPC_1336 SPC_1337 usg truA TRUE 0.849 0.000 0.040 1.000 N NA
 5678098 5678099 SPC_1337 SPC_1338 truA dedA FALSE 0.275 49.000 0.038 NA   NA
 5678099 5678100 SPC_1338 SPC_1339 dedA accD FALSE 0.062 150.000 0.020 NA   NA
 5678100 5678101 SPC_1339 SPC_1340 accD folC TRUE 0.719 68.000 0.383 1.000 N NA
 5678101 5678102 SPC_1340 SPC_1341 folC dedD TRUE 0.978 -10.000 0.216 NA   NA
 5678102 5678103 SPC_1341 SPC_1342 dedD   FALSE 0.092 109.000 0.018 NA   NA
 5678103 5678104 SPC_1342 SPC_1343   cvpA FALSE 0.176 47.000 0.003 NA   NA
 5678104 5678105 SPC_1343 SPC_1344 cvpA purF TRUE 0.814 38.000 0.262 1.000   NA
 5678107 5678108 SPC_1346 SPC_1347     TRUE 0.772 85.000 0.095 1.000 Y NA
 5678108 5678109 SPC_1347 SPC_1348     TRUE 0.997 2.000 0.500 NA Y NA
 5678109 5678110 SPC_1348 SPC_1349     TRUE 0.938 64.000 0.500 NA Y NA
 5678110 5678111 SPC_1349 SPC_1350   ubiX FALSE 0.455 27.000 0.000 1.000 N NA
 5678113 5678114 SPC_1352 SPC_1353 argT hisJ FALSE 0.324 238.000 0.000 0.015 Y NA
 5678114 5678115 SPC_1353 SPC_1354 hisJ hisQ TRUE 0.903 183.000 0.833 0.047 Y NA
 5678115 5678116 SPC_1354 SPC_1355 hisQ hisM TRUE 1.000 -3.000 0.900 0.015 Y NA
 5678116 5678117 SPC_1355 SPC_1356 hisM hisP TRUE 0.994 11.000 0.643 1.000 Y NA
 5678118 5678119 SPC_1357 SPC_1358 yfcH yfcG FALSE 0.166 126.000 0.000 NA   NA
 5678120 5678121 SPC_1359 SPC_1360 yfcF yfcE FALSE 0.450 56.000 0.092 NA   NA
 5678121 5678122 SPC_1360 SPC_1361 yfcE   TRUE 0.798 57.000 0.143 0.010   NA
 5678124 5678125 SPC_1363 SPC_1364     TRUE 0.896 81.000 0.117 0.010 Y NA
 5678125 5678126 SPC_1364 SPC_1365   ulaA TRUE 0.883 15.000 0.052 0.016   NA
 5678126 5678127 SPC_1365 SPC_1366 ulaA   TRUE 0.979 -3.000 0.167 1.000   NA
 5678127 5678128 SPC_1366 SPC_1367     TRUE 1.000 -7.000 0.742 0.001 Y NA
 5678129 5678130 SPC_1368 SPC_1369 yfcC pta FALSE 0.033 218.000 0.000 NA   NA
 5678130 5678131 SPC_1369 SPC_1370 pta ackA TRUE 0.833 77.000 0.634 1.000   NA
 5678131 5678132 SPC_1370 SPC_1371 ackA   FALSE 0.436 37.000 0.000 NA   NA
 5678133 5678134 SPC_1372 SPC_1373   yfbU TRUE 0.755 38.000 0.221 NA   NA
 5678134 5678135 SPC_1373 SPC_1374 yfbU yfbT TRUE 0.956 11.000 0.375 NA   NA
 5678135 5678136 SPC_1374 SPC_1375 yfbT yfbS TRUE 0.685 77.000 0.308 1.000   NA
 5678137 5678138 SPC_1376 SPC_1377   yfbQ FALSE 0.382 94.000 0.104 1.000   NA
 5678139 5678140 SPC_1378 SPC_1379   lrhA FALSE 0.002 666.000 0.000 NA   NA
 5678140 5678141 SPC_1379 SPC_1380 lrhA   FALSE 0.231 80.000 0.000 NA   NA
 5678141 5678142 SPC_1380 SPC_1381   nuoA FALSE 0.005 401.000 0.000 NA   NA
 5678142 5678143 SPC_1381 SPC_1382 nuoA nuoB TRUE 0.992 16.000 0.377 0.003 Y NA
 5678143 5678144 SPC_1382 SPC_1383 nuoB nuoC TRUE 0.976 87.000 0.691 0.003 Y NA
 5678144 5678145 SPC_1383 SPC_1384 nuoC nuoE TRUE 0.998 3.000 0.407 0.005 Y NA
 5678145 5678146 SPC_1384 SPC_1385 nuoE nuoF TRUE 0.998 -3.000 0.186 0.005 Y NA
 5678146 5678147 SPC_1385 SPC_1386 nuoF nuoG TRUE 0.974 31.000 0.180 0.005 Y NA
 5678147 5678148 SPC_1386 SPC_1387 nuoG nuoH TRUE 0.999 -3.000 0.664 0.005 Y NA
 5678148 5678149 SPC_1387 SPC_1388 nuoH nuoI TRUE 0.993 15.000 0.423 0.005 Y NA
 5678149 5678150 SPC_1388 SPC_1389 nuoI nuoJ TRUE 0.996 11.000 0.428 0.005 Y NA
 5678150 5678151 SPC_1389 SPC_1390 nuoJ nuoK TRUE 0.999 -3.000 0.269 0.003 Y NA
 5678151 5678152 SPC_1390 SPC_1391 nuoK nuoL TRUE 0.998 -3.000 0.211 0.005 Y NA
 5678152 5678153 SPC_1391 SPC_1392 nuoL nuoM TRUE 0.630 314.000 0.713 0.001 Y NA
 5678153 5678154 SPC_1392 SPC_1393 nuoM nuoN TRUE 0.998 7.000 0.437 0.001 Y NA
 5678156 5678157 SPC_1395 SPC_1396   yfbK FALSE 0.178 111.000 0.000 NA   NA
 5678158 5678159 SPC_1397 SPC_1398   elaC FALSE 0.451 66.000 0.091 1.000   NA
 5678160 5678161 SPC_1399 SPC_1400 elaA elaB FALSE 0.436 49.000 0.077 NA   NA
 5678161 5678162 SPC_1400 SPC_1401 elaB menF FALSE 0.154 101.000 0.043 NA   NA
 5678162 5678163 SPC_1401 SPC_1402 menF menD TRUE 0.874 86.000 0.281 1.000 Y NA
 5678163 5678164 SPC_1402 SPC_1403 menD yfbB TRUE 0.989 -3.000 0.355 NA   NA
 5678164 5678165 SPC_1403 SPC_1404 yfbB menB TRUE 0.900 15.000 0.280 NA   NA
 5678165 5678166 SPC_1404 SPC_1405 menB menC TRUE 0.998 0.000 0.171 0.001 Y NA
 5678166 5678167 SPC_1405 SPC_1406 menC menE TRUE 0.995 -3.000 0.283 0.001 N NA
 5678167 5678168 SPC_1406 SPC_1407 menE pmrD FALSE 0.084 98.000 0.005 NA   NA
 5678169 5678170 SPC_1408 SPC_1409     TRUE 0.993 0.000 0.613 NA   NA
 5678170 5678171 SPC_1409 SPC_1410   pqaB FALSE 0.337 105.000 0.091 1.000   NA
 5678171 5678172 SPC_1410 SPC_1411 pqaB   TRUE 0.849 -3.000 0.031 1.000 N NA
 5678172 5678173 SPC_1411 SPC_1412   yfbG TRUE 0.998 -3.000 0.447 1.000 Y NA
 5678173 5678174 SPC_1412 SPC_1413 yfbG pmrF TRUE 0.996 -3.000 0.220 NA Y NA
 5678174 5678175 SPC_1413 SPC_1414 pmrF   TRUE 0.995 3.000 0.378 NA Y NA
 5678178 5678179 SPC_1417 SPC_1418     FALSE 0.127 115.000 0.005 1.000   NA
 5678179 5678180 SPC_1418 SPC_1419   yfaX FALSE 0.029 250.000 0.000 1.000   NA
 5678180 5678181 SPC_1419 SPC_1420 yfaX yfaW TRUE 0.924 2.000 0.090 1.000 N NA
 5678181 5678182 SPC_1420 SPC_1421 yfaW yfaV FALSE 0.210 56.000 0.060 NA N NA
 5678182 5678183 SPC_1421 SPC_1422 yfaV   TRUE 0.784 26.000 0.250 NA N NA
 5678183 5678184 SPC_1422 SPC_1423     FALSE 0.455 33.000 0.000 NA   NA
 5678185 5678186 SPC_1424 SPC_1425     TRUE 0.919 -10.000 0.000 NA   NA
 5678186 5678187 SPC_1425 SPC_1426   glpC FALSE 0.011 302.000 0.000 NA   NA
 5678187 5678188 SPC_1426 SPC_1427 glpC glpB TRUE 0.998 -3.000 0.547 0.001 N NA
 5678188 5678189 SPC_1427 SPC_1428 glpB glpA TRUE 0.991 11.000 0.650 0.001 N NA
 5678190 5678191 SPC_1429 SPC_1430 glpT glpQ TRUE 0.975 5.000 0.396 1.000 N NA
 5678194 5678195 SPC_1433 SPC_1434 yfaE nrdB TRUE 0.895 0.000 0.000 1.000 N NA
 5678195 5678196 SPC_1434 SPC_1435 nrdB nrdA TRUE 0.852 113.000 0.000 0.001 Y NA
 5678196 5678197 SPC_1435 SPC_1436 nrdA ubiG FALSE 0.009 299.000 0.000 1.000 N NA
 5678197 5678198 SPC_1436 SPC_1437 ubiG   FALSE 0.065 83.000 0.004 1.000 N NA
 5678199 5678200 SPC_1438 SPC_1439     TRUE 0.637 15.000 0.000 NA   NA
 5678200 5678201 SPC_1439 SPC_1440   gyrA FALSE 0.004 410.000 0.000 NA   NA
 5678201 5678202 SPC_1440 SPC_1441 gyrA rcsC FALSE 0.267 118.000 0.013 0.085 N NA
 5678203 5678204 SPC_1442 SPC_1443 rcsB yojN TRUE 0.986 17.000 0.558 1.000 Y NA
 5678205 5678206 SPC_1444 SPC_1445 ompC yojL FALSE 0.173 115.000 0.066 1.000 N NA
 5678206 5678207 SPC_1445 SPC_1446 yojL ada FALSE 0.088 81.000 0.019 1.000 N NA
 5678207 5678208 SPC_1446 SPC_1447 ada alkB TRUE 0.883 3.000 0.000 NA   NA
 5678208 5678209 SPC_1447 SPC_1448 alkB yojI FALSE 0.244 76.000 0.000 NA   NA
 5678211 5678212 SPC_1450 SPC_1451 napF yojF TRUE 0.977 -10.000 0.209 NA   NA
 5678212 5678213 SPC_1451 SPC_1452 yojF napA TRUE 0.995 -3.000 0.875 NA N NA
 5678213 5678214 SPC_1452 SPC_1453 napA napG TRUE 0.982 7.000 0.243 0.048   NA
 5678214 5678215 SPC_1453 SPC_1454 napG napH TRUE 0.998 -13.000 0.795 0.048   NA
 5678215 5678216 SPC_1454 SPC_1455 napH napB TRUE 0.940 95.000 0.316 0.008 Y NA
 5678216 5678217 SPC_1455 SPC_1456 napB napC TRUE 0.997 10.000 0.490 0.004 Y NA
 5678217 5678218 SPC_1456 SPC_1457 napC ccmA FALSE 0.134 90.000 0.043 1.000 N NA
 5678218 5678219 SPC_1457 SPC_1458 ccmA ccmB TRUE 0.990 30.000 0.503 0.004 Y NA
 5678219 5678220 SPC_1458 SPC_1459 ccmB ccmC TRUE 0.983 52.000 0.501 0.002 Y NA
 5678220 5678221 SPC_1459 SPC_1460 ccmC ccmD TRUE 0.992 -3.000 0.501 1.000 N NA
 5678221 5678222 SPC_1460 SPC_1461 ccmD ccmE TRUE 0.987 -3.000 0.344 1.000 N NA
 5678222 5678223 SPC_1461 SPC_1462 ccmE ccmF TRUE 0.998 -3.000 0.211 0.004 Y NA
 5678223 5678224 SPC_1462 SPC_1463 ccmF ccmG TRUE 1.000 -3.000 0.804 0.004 Y NA
 5678224 5678225 SPC_1463 SPC_1464 ccmG ccmH TRUE 0.989 15.000 0.578 1.000 Y NA
 5678229 5678230 SPC_1468 SPC_1469     FALSE 0.011 297.000 0.000 NA   NA
 5678230 5678231 SPC_1469 SPC_1470   sspH2 FALSE 0.030 223.000 0.000 NA   NA
 5678232 5678233 SPC_1471 SPC_t027     FALSE 0.006 372.000 0.000 NA   NA
 5678233 5678234 SPC_t027 SPC_1472   yejM FALSE 0.248 74.000 0.000 NA   NA
 5678234 5678235 SPC_1472 SPC_1473 yejM yejL FALSE 0.376 32.000 0.040 NA   NA
 5678236 5678237 SPC_1474 SPC_1475 yejK   FALSE 0.220 85.000 0.000 NA   NA
 5678238 5678239 SPC_1476 SPC_1477 rplY yejH FALSE 0.329 125.000 0.024 0.017 N NA
 5678240 5678241 SPC_1478 SPC_1479 yejD bcr TRUE 0.743 28.000 0.182 1.000 N NA
 5678241 5678242 SPC_1479 SPC_1480 bcr yejG FALSE 0.005 391.000 0.000 NA   NA
 5678243 5678244 SPC_1481 SPC_1482 yejF yejE TRUE 0.994 2.000 0.758 1.000   NA
 5678244 5678245 SPC_1482 SPC_1483 yejE yejB TRUE 0.998 0.000 0.833 0.046   NA
 5678245 5678246 SPC_1483 SPC_1484 yejB yejA TRUE 0.993 10.000 0.848 0.046   NA
 5678246 5678247 SPC_1484 SPC_1485 yejA rtn TRUE 0.576 107.000 0.394 NA N NA
 5678247 5678248 SPC_1485 SPC_1486 rtn spr FALSE 0.026 325.000 0.219 NA N NA
 5678248 5678249 SPC_1486 SPC_1487 spr   FALSE 0.004 414.000 0.000 NA   NA
 5678249 5678250 SPC_1487 SPC_1488   yeiR TRUE 0.975 3.000 0.275 NA   NA
 5678250 5678251 SPC_1488 SPC_1489 yeiR   FALSE 0.092 185.000 0.085 NA   NA
 5678251 5678252 SPC_1489 SPC_1490     TRUE 0.928 -3.000 0.000 NA   NA
 5678254 5678255 SPC_1492 SPC_1493 yeiO   TRUE 0.785 10.000 0.000 NA   NA
 5678255 5678256 SPC_1493 SPC_1494     FALSE 0.220 85.000 0.000 NA   NA
 5678257 5678258 SPC_1495 SPC_1496 fruB fruK TRUE 0.993 0.000 0.112 1.000 Y NA
 5678258 5678259 SPC_1496 SPC_1497 fruK fruA TRUE 0.986 17.000 0.562 1.000 Y NA
 5678260 5678261 SPC_1498 SPC_1499 nfo yeiH FALSE 0.176 79.000 0.040 NA   NA
 5678262 5678263 SPC_1500 SPC_1501   yeiE TRUE 0.491 28.000 0.000 NA   NA
 5678263 5678264 SPC_1501 SPC_1502 yeiE lysP FALSE 0.047 190.000 0.000 1.000 N NA
 5678264 5678265 SPC_1502 SPC_1503 lysP cirA FALSE 0.006 345.000 0.000 1.000 N NA
 5678266 5678267 SPC_1504 SPC_1505     FALSE 0.455 33.000 0.000 NA   NA
 5678268 5678269 SPC_1506 SPC_1507 sdhL   TRUE 0.988 -40.000 0.400 1.000   NA
 5678271 5678272 SPC_1509 SPC_1510 folE   TRUE 0.637 15.000 0.000 NA   NA
 5678272 5678273 SPC_1510 SPC_1511   galS FALSE 0.122 150.000 0.000 NA   NA
 5678273 5678274 SPC_1511 SPC_1512 galS mglB FALSE 0.003 499.000 0.000 NA   NA
 5678274 5678275 SPC_1512 SPC_1513 mglB mglA FALSE 0.158 134.000 0.000 NA   NA
 5678275 5678276 SPC_1513 SPC_1514 mglA mglC TRUE 0.610 16.000 0.000 NA   NA
 5678277 5678278 SPC_1515 SPC_1516 yeiA   TRUE 0.921 -6.000 0.062 1.000 N NA
 5678278 5678279 SPC_1516 SPC_1517     FALSE 0.063 163.000 0.036 NA   NA
 5678279 5678280 SPC_1517 SPC_1518   sanA TRUE 0.856 -3.000 0.019 NA   NA
 5678280 5678281 SPC_1518 SPC_1519 sanA cdd FALSE 0.060 177.000 0.045 NA   NA
 5678281 5678282 SPC_1519 SPC_1520 cdd yohK FALSE 0.294 154.000 0.198 1.000 N NA
 5678282 5678283 SPC_1520 SPC_1521 yohK yohJ TRUE 0.990 -3.000 0.340 1.000   NA
 5678283 5678284 SPC_1521 SPC_1522 yohJ   FALSE 0.153 132.000 0.031 1.000   NA
 5678285 5678286 SPC_1523 SPC_1524     TRUE 0.961 12.000 0.600 NA N NA
 5678286 5678287 SPC_1524 SPC_1525     TRUE 0.934 16.000 0.000 1.000 Y NA
 5678287 5678288 SPC_1525 SPC_1526     TRUE 0.777 9.000 0.000 1.000 N NA
 5678288 5678289 SPC_1526 SPC_1527     TRUE 0.890 9.000 0.120 1.000 N NA
 5678289 5678290 SPC_1527 SPC_1528   yohI FALSE 0.066 97.000 0.013 1.000 N NA
 5678292 5678293 SPC_1530 SPC_1531   yohG FALSE 0.349 51.000 0.000 NA   NA
 5678293 5678294 SPC_1531 SPC_1532 yohG yohF FALSE 0.274 66.000 0.000 NA   NA
 5678296 5678297 SPC_1534 SPC_1535 yohC pbpG FALSE 0.201 166.000 0.145 NA   NA
 5678299 5678300 SPC_1537 SPC_1538 bglX yehZ FALSE 0.104 181.000 0.099 1.000 N NA
 5678300 5678301 SPC_1538 SPC_1539 yehZ yehY TRUE 0.992 4.000 0.521 0.046 N NA
 5678301 5678302 SPC_1539 SPC_1540 yehY yehX TRUE 0.998 -7.000 0.489 1.000 Y NA
 5678302 5678303 SPC_1540 SPC_1541 yehX yehW TRUE 0.998 -16.000 0.542 1.000 Y NA
 5678305 5678306 SPC_1543 SPC_1544 yehU yehT TRUE 0.999 -3.000 0.877 0.015 Y NA
 5678306 5678307 SPC_1544 SPC_1545 yehT yehS FALSE 0.344 47.000 0.051 NA   NA
 5678308 5678309 SPC_1546 SPC_1547   yehR FALSE 0.080 172.000 0.000 NA   NA
 5678309 5678310 SPC_1547 SPC_1548 yehR metG FALSE 0.023 241.000 0.000 NA   NA
 5678311 5678312 SPC_1549 SPC_1550 mrp yehE FALSE 0.015 278.000 0.000 NA   NA
 5678312 5678313 SPC_1550 SPC_1551 yehE stcA FALSE 0.015 279.000 0.000 NA   NA
 5678313 5678314 SPC_1551 SPC_1552 stcA stcB TRUE 0.997 -13.000 0.333 1.000 Y NA
 5678314 5678315 SPC_1552 SPC_1553 stcB stc TRUE 0.661 14.000 0.000 NA   NA
 5678315 5678316 SPC_1553 SPC_1554 stc stcD TRUE 0.610 16.000 0.000 NA   NA
 5678318 5678319 SPC_1556 SPC_1557 thiM thiD TRUE 0.995 -13.000 0.037 0.004 Y NA
 5678319 5678320 SPC_1557 SPC_1558 thiD yegW FALSE 0.355 36.000 0.049 1.000 N NA
 5678321 5678322 SPC_1559 SPC_1560 yegV yegU TRUE 0.992 -3.000 0.600 NA N NA
 5678322 5678323 SPC_1560 SPC_1561 yegU   TRUE 0.928 -3.000 0.000 NA   NA
 5678326 5678327 SPC_1564 SPC_1565     FALSE 0.008 344.000 0.000 NA   NA
 5678327 5678328 SPC_1565 SPC_1566     FALSE 0.169 122.000 0.000 NA   NA
 5678329 5678330 SPC_1567 SPC_1568   yegQ FALSE 0.003 491.000 0.000 NA   NA
 5678331 5678332 SPC_1569 SPC_1570     FALSE 0.312 58.000 0.000 NA   NA
 5678332 5678333 SPC_1570 SPC_1571     FALSE 0.004 435.000 0.000 NA   NA
 5678335 5678336 SPC_1573 SPC_1574     FALSE 0.002 602.000 0.000 NA   NA
 5678336 5678337 SPC_1574 SPC_1575     TRUE 0.491 28.000 0.000 NA   NA
 5678337 5678338 SPC_1575 SPC_1576     FALSE 0.193 102.000 0.000 NA   NA
 5678338 5678339 SPC_1576 SPC_1577     FALSE 0.004 412.000 0.000 NA   NA
 5678339 5678340 SPC_1577 SPC_1578     FALSE 0.040 209.000 0.000 NA   NA
 5678340 5678341 SPC_1578 SPC_1579     FALSE 0.002 1008.000 0.000 NA   NA
 5678341 5678342 SPC_1579 SPC_1580     FALSE 0.003 576.000 0.000 NA   NA
 5678342 5678343 SPC_1580 SPC_1581     FALSE 0.037 212.000 0.000 NA   NA
 5678343 5678344 SPC_1581 SPC_1582     FALSE 0.191 104.000 0.000 NA   NA
 5678345 5678346 SPC_1583 SPC_1584     TRUE 0.845 5.000 0.000 NA   NA
 5678346 5678347 SPC_1584 SPC_1585     TRUE 0.956 11.000 0.375 NA   NA
 5678347 5678348 SPC_1585 SPC_1586     TRUE 0.995 0.000 1.000 NA   NA
 5678348 5678349 SPC_1586 SPC_1587   baeR FALSE 0.016 269.000 0.000 NA   NA
 5678349 5678350 SPC_1587 SPC_1588 baeR baeS TRUE 0.999 -3.000 0.591 0.015 Y NA
 5678350 5678351 SPC_1588 SPC_1589 baeS   TRUE 0.911 0.000 0.000 NA   NA
 5678351 5678352 SPC_1589 SPC_1590   yegO TRUE 0.928 -3.000 0.000 NA   NA
 5678352 5678353 SPC_1590 SPC_1591 yegO yegN TRUE 0.986 1.000 0.000 NA Y NA
 5678353 5678354 SPC_1591 SPC_1592 yegN   TRUE 0.835 0.000 0.000 NA N NA
 5678359 5678360 SPC_1597 SPC_1598   udk FALSE 0.244 76.000 0.000 NA   NA
 5678360 5678361 SPC_1598 SPC_1599 udk dcd TRUE 0.759 91.000 0.098 1.000 Y NA
 5678361 5678362 SPC_1599 SPC_1600 dcd asmA FALSE 0.271 39.000 0.057 NA N NA
 5678363 5678364 SPC_1601 SPC_1602 yegH   FALSE 0.002 625.000 0.000 NA   NA
 5678365 5678366 SPC_1603 SPC_1604 wza wzb TRUE 0.961 6.000 0.286 1.000 N NA
 5678366 5678367 SPC_1604 SPC_1605 wzb wzc TRUE 0.994 -3.000 0.667 1.000 N NA
 5678367 5678368 SPC_1605 SPC_1606 wzc wcaA TRUE 0.937 36.000 0.231 NA Y NA
 5678368 5678369 SPC_1606 SPC_1607 wcaA wcaB TRUE 0.661 51.000 0.259 NA N NA
 5678369 5678370 SPC_1607 SPC_1608 wcaB wcaC TRUE 0.983 -3.000 0.259 1.000 N NA
 5678370 5678371 SPC_1608 SPC_1609 wcaC wcaD TRUE 0.987 -25.000 0.400 NA   NA
 5678371 5678372 SPC_1609 SPC_1610 wcaD wcaE TRUE 0.932 13.000 0.333 NA   NA
 5678372 5678373 SPC_1610 SPC_1611 wcaE wcaF TRUE 0.681 16.000 0.077 NA   NA
 5678373 5678374 SPC_1611 SPC_1612 wcaF gmd TRUE 0.660 18.000 0.000 1.000   NA
 5678374 5678375 SPC_1612 SPC_1613 gmd fcl TRUE 0.994 3.000 0.000 0.007 Y NA
 5678375 5678376 SPC_1613 SPC_1614 fcl   TRUE 0.973 3.000 0.217 1.000   NA
 5678376 5678377 SPC_1614 SPC_1615   wcaI FALSE 0.424 83.000 0.108 1.000   NA
 5678377 5678378 SPC_1615 SPC_1616 wcaI manC TRUE 0.994 -3.000 0.123 1.000 Y NA
 5678378 5678379 SPC_1616 SPC_1617 manC manB TRUE 0.810 111.000 1.000 1.000 N NA
 5678379 5678380 SPC_1617 SPC_1618 manB wcaJ TRUE 0.817 54.000 0.538 NA N NA
 5678380 5678381 SPC_1618 SPC_1619 wcaJ wzxC TRUE 0.769 48.000 0.304 NA   NA
 5678381 5678382 SPC_1619 SPC_1620 wzxC wcaK TRUE 0.669 22.000 0.095 NA   NA
 5678382 5678383 SPC_1620 SPC_1621 wcaK wcaL TRUE 0.957 -3.000 0.095 NA   NA
 5678383 5678384 SPC_1621 SPC_1622 wcaL wcaM TRUE 0.942 11.000 0.292 NA   NA
 5678384 5678385 SPC_1622 SPC_1623 wcaM galF TRUE 0.731 49.000 0.259 NA   NA
 5678385 5678386 SPC_1623 SPC_1624 galF   FALSE 0.005 385.000 0.000 NA   NA
 5678386 5678387 SPC_1624 SPC_1625     TRUE 0.965 0.000 0.154 NA   NA
 5678387 5678388 SPC_1625 SPC_1626     TRUE 0.988 -16.000 0.000 NA Y NA
 5678388 5678389 SPC_1626 SPC_1627     TRUE 0.987 -46.000 0.065 NA Y NA
 5678389 5678390 SPC_1627 SPC_1628   manC TRUE 0.990 -3.000 0.000 NA Y NA
 5678390 5678391 SPC_1628 SPC_1629 manC cpsG TRUE 0.896 15.000 0.286 1.000 N NA
 5678391 5678392 SPC_1629 SPC_1630 cpsG   FALSE 0.013 286.000 0.000 NA   NA
 5678392 5678393 SPC_1630 SPC_1631   gnd FALSE 0.153 137.000 0.000 NA   NA
 5678393 5678394 SPC_1631 SPC_1632 gnd ugd FALSE 0.021 237.000 0.000 1.000 N NA
 5678394 5678395 SPC_1632 SPC_1633 ugd cld TRUE 0.565 149.000 0.000 1.000 Y NA
 5678396 5678397 SPC_1634 SPC_1635 hisI hisF TRUE 0.999 -6.000 0.430 0.003 Y NA
 5678397 5678398 SPC_1635 SPC_1636 hisF hisA TRUE 0.999 -18.000 0.433 0.003 Y NA
 5678398 5678399 SPC_1636 SPC_1637 hisA hisH TRUE 0.998 0.000 0.210 0.003 Y NA
 5678399 5678400 SPC_1637 SPC_1638 hisH hisB TRUE 0.997 0.000 0.128 0.003 Y NA
 5678400 5678401 SPC_1638 SPC_1639 hisB hisC TRUE 0.999 -3.000 0.341 0.003 Y NA
 5678401 5678402 SPC_1639 SPC_1640 hisC hisD TRUE 0.999 -3.000 0.294 0.003 Y NA
 5678402 5678403 SPC_1640 SPC_1641 hisD hisG TRUE 0.910 103.000 0.171 0.003 Y NA
 5678403 5678404 SPC_1641 SPC_1642 hisG hisL FALSE 0.381 146.000 0.003 0.003   NA
 5678405 5678406 SPC_1643 SPC_1644 yeeZ yeeY FALSE 0.154 46.000 0.015 1.000 N NA
 5678406 5678407 SPC_1644 SPC_1645 yeeY yeeF FALSE 0.011 286.000 0.000 1.000 N NA
 5678408 5678409 SPC_1646 SPC_1647 sbcB sopA FALSE 0.006 367.000 0.000 NA   NA
 5678410 5678411 SPC_1648 SPC_1649   phsA FALSE 0.023 245.000 0.000 NA   NA
 5678411 5678412 SPC_1649 SPC_1650 phsA phsB TRUE 0.991 15.000 0.400 0.047 Y NA
 5678412 5678413 SPC_1650 SPC_1651 phsB phsC TRUE 0.999 -3.000 0.600 0.047 Y NA
 5678413 5678414 SPC_1651 SPC_1652 phsC dacD FALSE 0.144 124.000 0.000 1.000 N NA
 5678414 5678415 SPC_1652 SPC_1653 dacD sbmC FALSE 0.153 151.000 0.110 NA N NA
 5678415 5678416 SPC_1653 SPC_1654 sbmC yeeA FALSE 0.266 119.000 0.096 NA   NA
 5678416 5678417 SPC_1654 SPC_1655 yeeA yeeX FALSE 0.070 245.000 0.180 NA   NA
 5678418 5678419 SPC_1656 SPC_1657 pduX pduW TRUE 0.709 58.000 0.080 0.003 N NA
 5678419 5678420 SPC_1657 SPC_1658 pduW pduV TRUE 0.981 0.000 0.292 1.000 N NA
 5678420 5678421 SPC_1658 SPC_1659 pduV pduU TRUE 0.990 5.000 0.200 1.000 Y NA
 5678421 5678422 SPC_1659 SPC_1660 pduU pduT TRUE 0.944 0.000 0.133 NA N NA
 5678422 5678423 SPC_1660 SPC_1661 pduT pduS TRUE 0.998 3.000 0.714 NA Y NA
 5678423 5678424 SPC_1661 SPC_1662 pduS pduQ TRUE 0.997 -3.000 0.259 1.000 Y NA
 5678424 5678425 SPC_1662 SPC_1663 pduQ pduP TRUE 0.979 12.000 0.000 0.025 Y NA
 5678425 5678426 SPC_1663 SPC_1664 pduP pduO TRUE 0.948 -3.000 0.000 1.000   NA
 5678426 5678427 SPC_1664 SPC_1665 pduO pduN TRUE 0.948 10.000 0.268 NA   NA
 5678427 5678428 SPC_1665 SPC_1666 pduN pduM TRUE 0.972 4.000 0.296 NA   NA
 5678428 5678429 SPC_1666 SPC_1667 pduM pduL TRUE 0.983 -3.000 0.242 NA   NA
 5678429 5678430 SPC_1667 SPC_1668 pduL pduK TRUE 0.995 0.000 0.242 NA Y NA
 5678430 5678431 SPC_1668 SPC_1669 pduK pduJ TRUE 0.997 4.000 0.645 NA Y NA
 5678431 5678432 SPC_1669 SPC_1670 pduJ pduH TRUE 0.565 19.000 0.000 NA   NA
 5678432 5678433 SPC_1670 SPC_1671 pduH pduG TRUE 0.919 -10.000 0.000 NA   NA
 5678433 5678434 SPC_1671 SPC_1672 pduG pduE TRUE 0.941 16.000 0.500 NA   NA
 5678434 5678435 SPC_1672 SPC_1673 pduE pduD TRUE 0.990 15.000 0.759 0.001   NA
 5678435 5678436 SPC_1673 SPC_1674 pduD pduC TRUE 0.953 11.000 0.000 0.001   NA
 5678436 5678437 SPC_1674 SPC_1675 pduC pudB TRUE 0.521 19.000 0.000 1.000 N NA
 5678437 5678438 SPC_1675 SPC_1676 pudB pduA TRUE 0.951 -3.000 0.083 NA   NA
 5678439 5678440 SPC_1677 SPC_1678 pduF pocR FALSE 0.121 217.000 0.231 1.000 N NA
 5678440 5678441 SPC_1678 SPC_1679 pocR   FALSE 0.075 177.000 0.000 NA   NA
 5678441 5678442 SPC_1679 SPC_1680   cbiA FALSE 0.010 316.000 0.000 NA   NA
 5678442 5678443 SPC_1680 SPC_1681 cbiA cobD TRUE 0.997 -3.000 0.124 0.009 Y NA
 5678443 5678444 SPC_1681 SPC_1682 cobD cbiC TRUE 0.988 11.000 0.107 0.009 Y NA
 5678444 5678445 SPC_1682 SPC_1683 cbiC cbiD TRUE 0.997 0.000 0.168 0.009 Y NA
 5678445 5678446 SPC_1683 SPC_1684 cbiD cbiE TRUE 0.994 6.000 0.126 0.009 Y NA
 5678446 5678447 SPC_1684 SPC_1685 cbiE cbiT TRUE 0.999 -10.000 0.300 0.001 Y NA
 5678447 5678448 SPC_1685 SPC_1686 cbiT cbiF TRUE 0.995 -16.000 0.056 0.009 Y NA
 5678448 5678449 SPC_1686 SPC_1687 cbiF cbiG TRUE 0.999 -19.000 0.397 0.009 Y NA
 5678449 5678450 SPC_1687 SPC_1688 cbiG cbiH TRUE 0.999 0.000 0.352 0.009 Y NA
 5678450 5678451 SPC_1688 SPC_1689 cbiH cbiJ TRUE 0.999 -3.000 0.423 0.009 Y NA
 5678451 5678452 SPC_1689 SPC_1690 cbiJ cbiK TRUE 0.983 3.000 0.029 1.000 Y NA
 5678452 5678453 SPC_1690 SPC_1691 cbiK cbiL TRUE 0.991 -3.000 0.048 1.000 Y NA
 5678453 5678454 SPC_1691 SPC_1692 cbiL cbiM TRUE 0.980 -3.000 0.058 0.009 N NA
 5678454 5678455 SPC_1692 SPC_1693 cbiM cbiN TRUE 0.999 2.000 0.861 0.009 Y NA
 5678455 5678456 SPC_1693 SPC_1694 cbiN cbiQ TRUE 1.000 -13.000 0.804 0.001 Y NA
 5678456 5678457 SPC_1694 SPC_1695 cbiQ cbiO TRUE 0.995 9.000 0.152 0.001 Y NA
 5678457 5678458 SPC_1695 SPC_1696 cbiO cbiP TRUE 0.818 -24.000 0.033 1.000 N NA
 5678458 5678459 SPC_1696 SPC_1697 cbiP cobU TRUE 0.988 -3.000 0.003 1.000 Y NA
 5678459 5678460 SPC_1697 SPC_1698 cobU cobS TRUE 0.988 -3.000 0.003 1.000 Y NA
 5678460 5678461 SPC_1698 SPC_1699 cobS cobT TRUE 0.954 27.000 0.056 0.009 Y NA
 5678461 5678462 SPC_1699 SPC_1700 cobT erfK FALSE 0.117 78.000 0.015 NA   NA
 5678462 5678463 SPC_1700 SPC_1701 erfK   FALSE 0.349 51.000 0.000 NA   NA
 5678465 5678466 SPC_1702 SPC_t029     FALSE 0.143 141.000 0.000 NA   NA
 5678466 5678467 SPC_t029 SPC_1703     FALSE 0.091 165.000 0.000 NA   NA
 5678469 5678470 SPC_1705 SPC_1706     TRUE 0.926 -115.000 0.000 1.000   NA
 5678470 5678471 SPC_1706 SPC_1707     FALSE 0.054 210.000 0.000 1.000   NA
 5678471 5678472 SPC_1707 SPC_1708     TRUE 0.694 57.000 0.000 0.010   NA
 5678472 5678473 SPC_1708 SPC_1709     FALSE 0.039 210.000 0.000 NA   NA
 5678473 5678474 SPC_1709 SPC_1710     FALSE 0.009 320.000 0.000 NA   NA
 5678477 5678478 SPC_1713 SPC_1714     TRUE 0.855 72.000 0.800 NA   NA
 5678478 5678479 SPC_1714 SPC_t030     FALSE 0.003 497.000 0.000 NA   NA
 5678479 5678480 SPC_t030 SPC_1715   yeeI FALSE 0.194 101.000 0.000 NA   NA
 5678481 5678482 SPC_t031 SPC_1716     FALSE 0.014 283.000 0.000 NA   NA
 5678482 5678483 SPC_1716 SPC_1717   umuD FALSE 0.166 127.000 0.000 NA   NA
 5678483 5678484 SPC_1717 SPC_1718 umuD umuC TRUE 0.863 3.000 0.000 1.000 N NA
 5678484 5678485 SPC_1718 SPC_1719 umuC cspB FALSE 0.003 455.000 0.000 1.000 N NA
 5678487 5678488 SPC_1721 SPC_1722   yedJ FALSE 0.247 80.000 0.062 NA   NA
 5678488 5678489 SPC_1722 SPC_1723 yedJ dcm FALSE 0.318 74.000 0.000 1.000   NA
 5678489 5678490 SPC_1723 SPC_1724 dcm vsr TRUE 0.994 -19.000 0.000 0.056 Y NA
 5678492 5678493 SPC_1726 SPC_1727 yedI   FALSE 0.391 44.000 0.000 NA   NA
 5678493 5678494 SPC_1727 SPC_1728     FALSE 0.273 165.000 0.208 NA   NA
 5678495 5678496 SPC_1729 SPC_1730 yedP yodD FALSE 0.009 331.000 0.000 NA   NA
 5678498 5678499 SPC_1732 SPC_1733 rcsA fliR FALSE 0.012 282.000 0.000 1.000 N NA
 5678499 5678500 SPC_1733 SPC_1734 fliR fliQ TRUE 0.989 9.000 0.028 0.002 Y NA
 5678500 5678501 SPC_1734 SPC_1735 fliQ fliP TRUE 0.993 28.000 0.827 0.009 Y NA
 5678501 5678502 SPC_1735 SPC_1736 fliP fliO TRUE 0.995 0.000 0.203 1.000 Y NA
 5678502 5678503 SPC_1736 SPC_1737 fliO fliN TRUE 0.997 0.000 0.443 1.000 Y NA
 5678503 5678504 SPC_1737 SPC_1738 fliN fliM TRUE 0.995 6.000 0.137 0.001 Y NA
 5678504 5678505 SPC_1738 SPC_1739 fliM fliL TRUE 0.999 5.000 0.957 0.001 Y NA
 5678505 5678506 SPC_1739 SPC_1740 fliL fliK TRUE 0.759 105.000 0.119 1.000 Y NA
 5678506 5678507 SPC_1740 SPC_1741 fliK fliJ TRUE 0.999 -3.000 0.317 0.005 Y NA
 5678507 5678508 SPC_1741 SPC_1742 fliJ fliI TRUE 0.923 22.000 0.073 1.000 Y NA
 5678508 5678509 SPC_1742 SPC_1743 fliI fliH TRUE 0.988 -30.000 0.000 1.000 Y NA
 5678509 5678510 SPC_1743 SPC_1744 fliH fliG TRUE 0.995 -7.000 0.005 0.003 Y NA
 5678510 5678511 SPC_1744 SPC_1745 fliG fliF TRUE 0.998 -7.000 0.220 0.005 Y NA
 5678513 5678514 SPC_1747 SPC_1748   yedF FALSE 0.017 265.000 0.000 NA   NA
 5678514 5678515 SPC_1748 SPC_1749 yedF yedE TRUE 0.996 -3.000 0.844 NA   NA
 5678517 5678518 SPC_1751 SPC_1752 amyA fliT FALSE 0.254 72.000 0.000 NA   NA
 5678518 5678519 SPC_1752 SPC_1753 fliT fliS TRUE 0.987 0.000 0.324 1.000   NA
 5678519 5678520 SPC_1753 SPC_1754 fliS fliD TRUE 0.991 15.000 0.284 0.002 Y NA
 5678520 5678521 SPC_1754 SPC_1755 fliD   TRUE 0.900 -49.000 0.000 NA   NA
 5678522 5678523 SPC_1756 SPC_1757 fliC fliB FALSE 0.233 79.000 0.000 NA   NA
 5678523 5678524 SPC_1757 SPC_1758 fliB fliA FALSE 0.049 197.000 0.000 NA   NA
 5678524 5678525 SPC_1758 SPC_1759 fliA fliZ FALSE 0.401 89.000 0.108 1.000   NA
 5678525 5678526 SPC_1759 SPC_1760 fliZ fliY FALSE 0.477 147.000 0.280 1.000   NA
 5678526 5678527 SPC_1760 SPC_1761 fliY yedO TRUE 0.839 154.000 0.469 1.000 Y NA
 5678527 5678528 SPC_1761 SPC_1762 yedO yecS TRUE 0.912 21.000 0.050 1.000 Y NA
 5678528 5678529 SPC_1762 SPC_1763 yecS yecC TRUE 0.995 -3.000 0.150 1.000 Y NA
 5678529 5678530 SPC_1763 SPC_1764 yecC sdiA FALSE 0.029 233.000 0.071 1.000 N NA
 5678531 5678532 SPC_1765 SPC_1766 yecF   TRUE 0.928 -3.000 0.000 NA   NA
 5678533 5678534 SPC_1767 SPC_1768 sirA uvrC TRUE 0.982 -3.000 0.086 0.022 N NA
 5678534 5678535 SPC_1768 SPC_1769 uvrC pgsA TRUE 0.646 57.000 0.227 1.000 N NA
 5678535 5678536 SPC_1769 SPC_t032 pgsA   FALSE 0.117 152.000 0.000 NA   NA
 5678536 5678537 SPC_t032 SPC_t033     FALSE 0.337 53.000 0.000 NA   NA
 5678537 5678538 SPC_t033 SPC_t034     TRUE 0.710 12.000 0.000 NA   NA
 5678538 5678539 SPC_t034 SPC_1770     FALSE 0.239 77.000 0.000 NA   NA
 5678539 5678540 SPC_1770 SPC_1771     FALSE 0.379 46.000 0.000 NA   NA
 5678540 5678541 SPC_1771 SPC_1772     FALSE 0.036 214.000 0.000 NA   NA
 5678541 5678542 SPC_1772 SPC_1773     FALSE 0.036 213.000 0.000 NA   NA
 5678542 5678543 SPC_1773 SPC_1774   yecA FALSE 0.024 239.000 0.000 NA   NA
 5678546 5678547 SPC_1777 SPC_1778 ftnA   FALSE 0.197 99.000 0.000 NA   NA
 5678547 5678548 SPC_1778 SPC_1779     TRUE 0.515 25.000 0.000 NA   NA
 5678550 5678551 SPC_1781 SPC_1782 yecI   FALSE 0.006 355.000 0.000 NA   NA
 5678552 5678553 SPC_1783 SPC_1784 araH otsB FALSE 0.003 516.000 0.000 NA   NA
 5678553 5678554 SPC_1784 SPC_1785 otsB otsA TRUE 0.996 -25.000 0.068 0.001 Y NA
 5678556 5678557 SPC_1787 SPC_1788 flhD flhC TRUE 0.989 -3.000 0.000 0.001   NA
 5678557 5678558 SPC_1788 SPC_1789 flhC motA TRUE 0.656 125.000 0.408 1.000   NA
 5678558 5678559 SPC_1789 SPC_1790 motA motB TRUE 0.998 -3.000 0.429 1.000 Y NA
 5678559 5678560 SPC_1790 SPC_1791 motB cheA TRUE 0.996 11.000 0.913 1.000 Y NA
 5678560 5678561 SPC_1791 SPC_1792 cheA cheW TRUE 0.991 21.000 0.447 0.004 Y NA
 5678561 5678562 SPC_1792 SPC_1793 cheW cheM TRUE 0.990 6.000 0.043 0.005 Y NA
 5678562 5678563 SPC_1793 SPC_1794 cheM cheR TRUE 0.501 154.000 0.037 1.000 Y NA
 5678563 5678564 SPC_1794 SPC_1795 cheR cheB TRUE 0.993 -3.000 0.087 1.000 Y NA
 5678564 5678565 SPC_1795 SPC_1796 cheB cheY TRUE 0.991 18.000 0.467 0.012 Y NA
 5678565 5678566 SPC_1796 SPC_1797 cheY cheZ TRUE 0.976 8.000 0.000 1.000 Y NA
 5678566 5678567 SPC_1797 SPC_1798 cheZ flhB FALSE 0.330 194.000 0.000 1.000 Y NA
 5678567 5678568 SPC_1798 SPC_1799 flhB flhA TRUE 0.999 -7.000 0.287 0.009 Y NA
 5678568 5678569 SPC_1799 SPC_1800 flhA flhE TRUE 0.991 0.000 0.158 0.002   NA
 5678569 5678570 SPC_1800 SPC_1801 flhE   FALSE 0.033 240.000 0.000 1.000   NA
 5678571 5678572 SPC_1802 SPC_1803   argS FALSE 0.013 189.000 0.002 1.000 N NA
 5678572 5678573 SPC_1803 SPC_1804 argS   FALSE 0.312 58.000 0.000 NA   NA
 5678574 5678575 SPC_1805 SPC_1806 yecM cutC TRUE 0.555 20.000 0.000 NA   NA
 5678576 5678577 SPC_1807 SPC_1808 yecP yecO TRUE 0.987 -3.000 0.315 NA   NA
 5678577 5678578 SPC_1808 SPC_1809 yecO yecN TRUE 0.533 41.000 0.089 NA   NA
 5678578 5678579 SPC_1809 SPC_1810 yecN yecE TRUE 0.539 53.000 0.126 NA   NA
 5678579 5678580 SPC_1810 SPC_1811 yecE yecD TRUE 0.954 -3.000 0.089 NA   NA
 5678581 5678582 SPC_1812 SPC_1813 aspS ntpA FALSE 0.146 103.000 0.050 1.000 N NA
 5678582 5678583 SPC_1813 SPC_1814 ntpA yebC FALSE 0.363 30.000 0.035 NA   NA
 5678583 5678584 SPC_1814 SPC_1815 yebC ruvC TRUE 0.799 37.000 0.277 NA   NA
 5678585 5678586 SPC_1816 SPC_1817 yebB   FALSE 0.002 675.000 0.000 NA   NA
 5678587 5678588 SPC_1818 SPC_1819   ruvA FALSE 0.076 175.000 0.000 NA   NA
 5678588 5678589 SPC_1819 SPC_1820 ruvA ruvB TRUE 0.998 9.000 0.549 0.001 Y NA
 5678590 5678591 SPC_1821 SPC_1822 yebI znuC TRUE 0.999 -3.000 0.755 0.082 Y NA
 5678592 5678593 SPC_1823 SPC_1824 yebL yebA TRUE 0.770 16.000 0.131 1.000 N NA
 5678593 5678594 SPC_1824 SPC_1825 yebA msbB TRUE 0.846 117.000 0.299 1.000 Y NA
 5678595 5678596 SPC_1826 SPC_1827     TRUE 0.501 171.000 0.476 1.000   NA
 5678596 5678597 SPC_1827 SPC_1828   pykA FALSE 0.208 135.000 0.000 1.000   NA
 5678597 5678598 SPC_1828 SPC_1829 pykA hexR FALSE 0.180 124.000 0.071 1.000 N NA
 5678599 5678600 SPC_1830 SPC_1831 zwf edd FALSE 0.176 235.000 0.041 1.000 Y NA
 5678600 5678601 SPC_1831 SPC_1832 edd eda TRUE 0.972 38.000 0.523 1.000 Y NA
 5678603 5678604 SPC_1834 SPC_1835 yebG yebF FALSE 0.269 68.000 0.000 NA   NA
 5678604 5678605 SPC_1835 SPC_1836 yebF yebE FALSE 0.203 94.000 0.000 NA   NA
 5678605 5678606 SPC_1836 SPC_1837 yebE opdB FALSE 0.060 213.000 0.092 NA   NA
 5678607 5678608 SPC_1838 SPC_1839 exoX   TRUE 0.949 24.000 0.667 1.000   NA
 5678608 5678609 SPC_1839 SPC_1840   holE TRUE 0.532 108.000 0.222 1.000   NA
 5678610 5678611 SPC_1841 SPC_1842 yobA   TRUE 0.888 52.000 0.613 1.000   NA
 5678611 5678612 SPC_1842 SPC_1843     TRUE 0.957 17.000 0.704 NA   NA
 5678614 5678615 SPC_1845 SPC_1846   vtaP FALSE 0.231 80.000 0.000 NA   NA
 5678615 5678616 SPC_1846 SPC_1847 vtaP   FALSE 0.211 88.000 0.000 NA   NA
 5678617 5678618 SPC_1848 SPC_1849     FALSE 0.004 425.000 0.000 NA   NA
 5678618 5678619 SPC_1849 SPC_1850     FALSE 0.002 648.000 0.000 NA   NA
 5678619 5678620 SPC_1850 SPC_1851     FALSE 0.002 934.000 0.000 NA   NA
 5678620 5678621 SPC_1851 SPC_1852     TRUE 0.955 5.000 0.000 0.055   NA
 5678623 5678624 SPC_1854 SPC_1855     FALSE 0.101 159.000 0.000 NA   NA
 5678626 5678627 SPC_1857 SPC_1858     FALSE 0.046 200.000 0.000 NA   NA
 5678627 5678628 SPC_1858 SPC_1859     TRUE 0.785 10.000 0.000 NA   NA
 5678628 5678629 SPC_1859 SPC_1860   pagO FALSE 0.149 139.000 0.000 NA   NA
 5678629 5678630 SPC_1860 SPC_1861 pagO   FALSE 0.005 393.000 0.000 NA   NA
 5678630 5678631 SPC_1861 SPC_1862   stbD FALSE 0.016 270.000 0.000 NA   NA
 5678634 5678635 SPC_1865 SPC_1866     TRUE 0.993 5.000 0.400 0.002   NA
 5678635 5678636 SPC_1866 SPC_1867   tnp TRUE 0.996 0.000 0.400 0.002   NA
 5678637 5678638 SPC_1868 SPC_1869     FALSE 0.089 166.000 0.000 NA   NA
 5678639 5678640 SPC_1870 SPC_1871     FALSE 0.164 129.000 0.000 NA   NA
 5678641 5678642 SPC_1872 SPC_1873     FALSE 0.009 328.000 0.000 NA   NA
 5678643 5678644 SPC_1874 SPC_1875     FALSE 0.014 285.000 0.000 NA   NA
 5678644 5678645 SPC_1875 SPC_1876   pphA FALSE 0.042 205.000 0.000 NA   NA
 5678646 5678647 SPC_1877 SPC_1878     TRUE 0.601 110.000 0.353 NA   NA
 5678647 5678648 SPC_1878 SPC_1879     FALSE 0.315 115.000 0.121 NA   NA
 5678648 5678649 SPC_1879 SPC_1880     TRUE 0.719 78.000 0.420 NA   NA
 5678649 5678650 SPC_1880 SPC_1881   yebS TRUE 0.994 -31.000 0.840 NA   NA
 5678651 5678652 SPC_1882 SPC_1883   proQ TRUE 0.695 98.000 0.081 NA Y NA
 5678652 5678653 SPC_1883 SPC_1884 proQ prc TRUE 0.976 -28.000 0.304 NA N NA
 5678653 5678654 SPC_1884 SPC_1885 prc htpX FALSE 0.133 194.000 0.042 0.018 N NA
 5678658 5678659 SPC_1889 SPC_1890 yobG   TRUE 0.779 71.000 0.500 NA   NA
 5678659 5678660 SPC_1890 SPC_1891   yobF FALSE 0.002 649.000 0.000 NA   NA
 5678660 5678661 SPC_1891 SPC_1892 yobF cspC TRUE 0.894 13.000 0.214 NA   NA
 5678661 5678662 SPC_1892 SPC_1893 cspC ftsI FALSE 0.027 220.000 0.000 1.000 N NA
 5678662 5678663 SPC_1893 SPC_1894 ftsI rrmA FALSE 0.278 65.000 0.000 NA   NA
 5678664 5678665 SPC_1895 SPC_1896 yebN   FALSE 0.006 356.000 0.000 NA   NA
 5678665 5678666 SPC_1896 SPC_1897   manZ TRUE 0.879 59.000 0.755 NA   NA
 5678666 5678667 SPC_1897 SPC_1898 manZ manY TRUE 0.999 4.000 0.939 0.015 Y NA
 5678667 5678668 SPC_1898 SPC_1899 manY manX TRUE 0.930 53.000 0.106 0.015 Y NA
 5678669 5678670 SPC_1900 SPC_1901   yoaE TRUE 0.873 -12.000 0.034 NA   NA
 5678671 5678672 SPC_1902 SPC_1903   sdaA TRUE 0.587 102.000 0.389 NA N NA
 5678672 5678673 SPC_1903 SPC_1904 sdaA yeaB FALSE 0.118 264.000 0.409 1.000 N NA
 5678673 5678674 SPC_1904 SPC_1905 yeaB pabB TRUE 0.922 4.000 0.116 1.000 N NA
 5678677 5678678 SPC_1908 SPC_1909 yoaA yeaZ FALSE 0.368 58.000 0.082 1.000 N NA
 5678678 5678679 SPC_1909 SPC_1910 yeaZ slp FALSE 0.112 72.000 0.024 1.000 N NA
 5678681 5678682 SPC_1912 SPC_1913 fadD rnd FALSE 0.345 85.000 0.115 1.000 N NA
 5678683 5678684 SPC_1914 SPC_1915 minE minD TRUE 0.997 4.000 0.618 NA Y NA
 5678684 5678685 SPC_1915 SPC_1916 minD minC TRUE 0.978 24.000 0.466 1.000 Y NA
 5678686 5678687 SPC_1917 SPC_1918   ycgM FALSE 0.462 32.000 0.056 NA   NA
 5678687 5678688 SPC_1918 SPC_1919 ycgM ycgN FALSE 0.331 78.000 0.088 NA   NA
 5678688 5678689 SPC_1919 SPC_1920 ycgN   FALSE 0.002 682.000 0.000 NA   NA
 5678690 5678691 SPC_1921 SPC_1922   dsbB FALSE 0.043 109.000 0.036 NA N NA
 5678691 5678692 SPC_1922 SPC_1923 dsbB nhaB TRUE 0.708 142.000 0.723 1.000 N NA
 5678695 5678696 SPC_1926 SPC_1927 dadA alr TRUE 0.844 14.000 0.168 1.000 N NA
 5678697 5678698 SPC_1928 SPC_1929 ycgO ycgQ FALSE 0.227 103.000 0.103 NA N NA
 5678704 5678705 SPC_1935 SPC_1936     FALSE 0.008 344.000 0.000 NA   NA
 5678705 5678706 SPC_1936 SPC_1937   appB TRUE 0.804 13.000 0.105 NA   NA
 5678706 5678707 SPC_1937 SPC_1938 appB   TRUE 0.987 12.000 0.158 0.045 Y NA
 5678707 5678708 SPC_1938 SPC_1939   hyaF FALSE 0.246 75.000 0.000 NA   NA
 5678708 5678709 SPC_1939 SPC_1940 hyaF hyaE TRUE 0.946 -3.000 0.077 NA   NA
 5678709 5678710 SPC_1940 SPC_1941 hyaE hyaD TRUE 0.953 -10.000 0.096 NA   NA
 5678710 5678711 SPC_1941 SPC_1942 hyaD hyaC TRUE 0.996 -3.000 0.177 1.000 Y NA
 5678711 5678712 SPC_1942 SPC_1943 hyaC   TRUE 0.987 19.000 0.355 0.045 Y NA
 5678712 5678713 SPC_1943 SPC_1944     TRUE 0.999 -3.000 0.611 0.002 Y NA
 5678715 5678716 SPC_1946 SPC_1947     FALSE 0.212 261.000 0.667 NA   NA
 5678716 5678717 SPC_1947 SPC_1948   ychF FALSE 0.002 720.000 0.000 NA   NA
 5678717 5678718 SPC_1948 SPC_1949 ychF pth TRUE 0.789 117.000 0.184 1.000 Y NA
 5678720 5678721 SPC_1951 SPC_1952 ychM prsA FALSE 0.074 125.000 0.027 1.000 N NA
 5678721 5678722 SPC_1952 SPC_1953 prsA ipk FALSE 0.005 275.000 0.018 1.000 N NA
 5678722 5678723 SPC_1953 SPC_1954 ipk lolB TRUE 0.826 -3.000 0.024 1.000 N NA
 5678724 5678725 SPC_1955 SPC_1956   hemK FALSE 0.002 2547.000 0.000 NA   NA
 5678725 5678726 SPC_1956 SPC_1957 hemK sirC TRUE 0.893 9.000 0.109 NA   NA
 5678726 5678727 SPC_1957 SPC_1958 sirC ychA TRUE 0.956 4.000 0.195 NA   NA
 5678727 5678728 SPC_1958 SPC_1959 ychA kdsA TRUE 0.617 38.000 0.089 1.000   NA
 5678733 5678734 SPC_1964 SPC_1965 narL narX TRUE 0.999 -7.000 0.521 0.014 Y NA
 5678735 5678736 SPC_1966 SPC_1967 narK narG FALSE 0.004 387.000 0.000 1.000 N NA
 5678736 5678737 SPC_1967 SPC_1968 narG narH TRUE 0.999 -3.000 0.471 0.001 Y NA
 5678737 5678738 SPC_1968 SPC_1969 narH narJ TRUE 0.999 -3.000 0.588 0.004 Y NA
 5678738 5678739 SPC_1969 SPC_1970 narJ narI TRUE 0.999 0.000 0.500 0.004 Y NA
 5678742 5678743 SPC_t035 SPC_t036     FALSE 0.033 218.000 0.000 NA   NA
 5678743 5678744 SPC_t036 SPC_1973   purU FALSE 0.101 159.000 0.000 NA   NA
 5678744 5678745 SPC_1973 SPC_1974 purU ychJ TRUE 0.979 -3.000 0.200 NA   NA
 5678746 5678747 SPC_1975 SPC_1976 ychK hnr FALSE 0.240 91.000 0.048 1.000   NA
 5678747 5678748 SPC_1976 SPC_1977 hnr galU FALSE 0.155 203.000 0.235 1.000 N NA
 5678752 5678753 SPC_1981 SPC_1982 ychE oppA FALSE 0.001 649.000 0.000 NA N NA
 5678753 5678754 SPC_1982 SPC_1983 oppA oppB TRUE 0.904 77.000 0.151 0.044 Y NA
 5678754 5678755 SPC_1983 SPC_1984 oppB oppC TRUE 0.996 15.000 0.870 0.044 Y NA
 5678755 5678756 SPC_1984 SPC_1985 oppC oppD TRUE 0.992 12.000 0.554 1.000 Y NA
 5678756 5678757 SPC_1985 SPC_1986 oppD oppF TRUE 0.999 -3.000 0.420 0.002 Y NA
 5678757 5678758 SPC_1986 SPC_1987 oppF   TRUE 0.824 48.000 0.042 1.000 Y NA
 5678759 5678760 SPC_1988 SPC_1989   cls TRUE 0.964 4.000 0.231 NA   NA
 5678764 5678765 SPC_1993 SPC_1994 yciA ispZ FALSE 0.187 161.000 0.167 NA N NA
 5678765 5678766 SPC_1994 SPC_1995 ispZ yciC FALSE 0.336 57.000 0.061 NA   NA
 5678766 5678767 SPC_1995 SPC_1996 yciC   TRUE 0.760 26.000 0.169 NA   NA
 5678769 5678770 SPC_1998 SPC_1999   yciE TRUE 0.803 59.000 0.115 0.002   NA
 5678770 5678771 SPC_1999 SPC_2000 yciE yciF TRUE 0.753 74.000 0.115 0.002   NA
 5678771 5678772 SPC_2000 SPC_2001 yciF   FALSE 0.208 90.000 0.000 NA   NA
 5678772 5678773 SPC_2001 SPC_2002   trpA FALSE 0.003 480.000 0.000 NA   NA
 5678773 5678774 SPC_2002 SPC_2003 trpA trpB TRUE 1.000 0.000 0.947 0.001 Y NA
 5678774 5678775 SPC_2003 SPC_2004 trpB trpC TRUE 0.995 10.000 0.221 0.001 Y NA
 5678775 5678776 SPC_2004 SPC_2005 trpC trpD TRUE 0.994 4.000 0.293 1.000 Y NA
 5678776 5678777 SPC_2005 SPC_2006 trpD trpE TRUE 0.995 0.000 0.010 0.001 Y NA
 5678777 5678778 SPC_2006 SPC_2007 trpE trpL FALSE 0.127 83.000 0.023 NA   NA
 5678779 5678780 SPC_2008 SPC_2009 trpH yciO TRUE 0.958 8.000 0.281 NA   NA
 5678780 5678781 SPC_2009 SPC_2010 yciO yciL TRUE 0.681 101.000 0.075 NA Y NA
 5678782 5678783 SPC_2011 SPC_2012 btuR yciK TRUE 0.901 -3.000 0.050 1.000 N NA
 5678786 5678787 SPC_2015 SPC_2016 topA cysB FALSE 0.001 412.000 0.008 1.000 N NA
 5678787 5678788 SPC_2016 SPC_2017 cysB   FALSE 0.012 293.000 0.000 NA   NA
 5678788 5678789 SPC_2017 SPC_2018     TRUE 0.898 1.000 0.000 NA   NA
 5678789 5678790 SPC_2018 SPC_2019   acnA FALSE 0.005 385.000 0.000 NA   NA
 5678792 5678793 SPC_2021 SPC_2022 pgpB yciS FALSE 0.261 150.000 0.143 NA   NA
 5678793 5678794 SPC_2022 SPC_2023 yciS yciM TRUE 0.983 7.000 0.576 NA   NA
 5678794 5678795 SPC_2023 SPC_2024 yciM pyrF FALSE 0.284 131.000 0.125 1.000 N NA
 5678795 5678796 SPC_2024 SPC_2025 pyrF yciH TRUE 0.868 0.000 0.045 1.000 N NA
 5678797 5678798 SPC_2026 SPC_2027 osmB yciT FALSE 0.019 259.000 0.000 NA   NA
 5678798 5678799 SPC_2027 SPC_2028 yciT   FALSE 0.413 87.000 0.146 NA   NA
 5678799 5678800 SPC_2028 SPC_2029   yciR FALSE 0.234 122.000 0.083 NA   NA
 5678800 5678801 SPC_2029 SPC_2030 yciR rnb FALSE 0.017 253.000 0.000 1.000 N NA
 5678801 5678802 SPC_2030 SPC_2031 rnb   FALSE 0.336 89.000 0.105 NA   NA
 5678802 5678803 SPC_2031 SPC_2032   fabI FALSE 0.014 284.000 0.057 NA   NA
 5678803 5678804 SPC_2032 SPC_2033 fabI   FALSE 0.005 392.000 0.000 NA   NA
 5678805 5678806 SPC_2034 SPC_2035     FALSE 0.003 465.000 0.000 NA   NA
 5678807 5678808 SPC_2036 SPC_2037 sapF sapD TRUE 0.999 2.000 0.684 0.014 Y NA
 5678808 5678809 SPC_2037 SPC_2038 sapD sapC TRUE 0.998 0.000 0.667 1.000 Y NA
 5678809 5678810 SPC_2038 SPC_2039 sapC sapB TRUE 0.998 -13.000 0.284 0.043 Y NA
 5678810 5678811 SPC_2039 SPC_2040 sapB sapA TRUE 0.992 -3.000 0.264 0.043 N NA
 5678811 5678812 SPC_2040 SPC_2041 sapA pspF TRUE 0.614 112.000 0.402 1.000 N NA
 5678813 5678814 SPC_2042 SPC_2043 pspA pspB TRUE 0.874 60.000 0.739 NA   NA
 5678814 5678815 SPC_2043 SPC_2044 pspB pspC TRUE 0.995 0.000 0.913 NA   NA
 5678815 5678816 SPC_2044 SPC_2045 pspC pspD TRUE 0.771 23.000 0.167 NA   NA
 5678816 5678817 SPC_2045 SPC_2046 pspD pspE FALSE 0.437 76.000 0.133 NA   NA
 5678817 5678818 SPC_2046 SPC_2047 pspE ycjX FALSE 0.063 143.000 0.013 NA   NA
 5678818 5678819 SPC_2047 SPC_2048 ycjX ycjF TRUE 0.995 -3.000 0.791 NA   NA
 5678819 5678820 SPC_2048 SPC_2049 ycjF tyrR FALSE 0.264 148.000 0.137 NA   NA
 5678826 5678827 SPC_2055 SPC_2056     FALSE 0.022 246.000 0.000 NA   NA
 5678829 5678830 SPC_2059 SPC_2060     FALSE 0.164 129.000 0.000 NA   NA
 5678831 5678832 SPC_2061 SPC_2062     FALSE 0.005 393.000 0.000 NA   NA
 5678833 5678834 SPC_2063 SPC_2064     TRUE 0.718 75.000 0.400 NA   NA
 5678834 5678835 SPC_2064 SPC_2065     TRUE 0.500 27.000 0.000 NA   NA
 5678835 5678836 SPC_2065 SPC_2066     FALSE 0.197 99.000 0.000 NA   NA
 5678837 5678838 SPC_2067 SPC_2068     TRUE 0.491 28.000 0.000 NA   NA
 5678842 5678843 SPC_2072 SPC_2073 ydaA fnr TRUE 0.868 157.000 0.619 1.000 Y NA
 5678843 5678844 SPC_2073 SPC_2074 fnr ogt FALSE 0.097 154.000 0.000 1.000 N NA
 5678845 5678846 SPC_2075 SPC_2076 ydaL   FALSE 0.031 221.000 0.000 NA   NA
 5678846 5678847 SPC_2076 SPC_2077     TRUE 0.747 11.000 0.000 NA   NA
 5678847 5678848 SPC_2077 SPC_2078     FALSE 0.117 152.000 0.000 NA   NA
 5678848 5678849 SPC_2078 SPC_2079   dbpA FALSE 0.003 488.000 0.000 1.000 N NA
 5678850 5678851 SPC_2080 SPC_2081 ydaO intR FALSE 0.177 52.000 0.012 NA   NA
 5678853 5678854 SPC_2083 SPC_2084 ynaF nifJ FALSE 0.003 482.000 0.000 1.000 N NA
 5678854 5678855 SPC_2084 SPC_2085 nifJ   FALSE 0.325 61.000 0.065 NA   NA
 5678857 5678858 SPC_2087 SPC_2088 hslJ ldhA FALSE 0.010 111.000 0.012 NA N NA
 5678859 5678860 SPC_2089 SPC_2090 ydbH ynbE TRUE 0.925 0.000 0.068 NA   NA
 5678860 5678861 SPC_2090 SPC_2091 ynbE ydbL TRUE 0.986 8.000 0.726 NA   NA
 5678861 5678862 SPC_2091 SPC_2092 ydbL   FALSE 0.039 210.000 0.000 NA   NA
 5678864 5678865 SPC_2094 SPC_2095 hrpA   FALSE 0.284 64.000 0.000 NA   NA
 5678865 5678866 SPC_2095 SPC_2096   cybB FALSE 0.172 117.000 0.000 NA   NA
 5678867 5678868 SPC_2097 SPC_2098 ybcY   FALSE 0.003 464.000 0.000 NA   NA
 5678868 5678869 SPC_2098 SPC_2099     FALSE 0.153 137.000 0.000 NA   NA
 5678869 5678870 SPC_2099 SPC_2100     TRUE 0.991 -3.000 0.048 1.000 Y NA
 5678870 5678871 SPC_2100 SPC_2101     TRUE 0.898 25.000 0.044 1.000 Y NA
 5678871 5678872 SPC_2101 SPC_2102     TRUE 0.987 7.000 0.044 0.055 Y NA
 5678877 5678878 SPC_2107 SPC_2108     TRUE 0.905 32.000 0.531 NA   NA
 5678878 5678879 SPC_2108 SPC_2109   trg FALSE 0.110 187.000 0.122 1.000 N NA
 5678881 5678882 SPC_2111 SPC_2112     TRUE 0.589 49.000 0.143 NA   NA
 5678882 5678883 SPC_2112 SPC_2113   ydcG FALSE 0.018 250.000 0.000 1.000 N NA
 5678883 5678884 SPC_2113 SPC_2114 ydcG   FALSE 0.050 196.000 0.000 NA   NA
 5678884 5678885 SPC_2114 SPC_2115     TRUE 0.806 9.000 0.000 NA   NA
 5678886 5678887 SPC_2116 SPC_2117     TRUE 0.713 15.000 0.000 1.000   NA
 5678887 5678888 SPC_2117 SPC_2118     TRUE 0.971 10.000 0.000 1.000 Y NA
 5678888 5678889 SPC_2118 SPC_2119     TRUE 0.989 0.000 0.000 1.000 Y NA
 5678889 5678890 SPC_2119 SPC_2120     TRUE 0.695 132.000 0.500 1.000   NA
 5678890 5678891 SPC_2120 SPC_2121     TRUE 0.959 14.000 0.500 1.000   NA
 5678891