MicrobesOnline Operon Predictions for Bacillus cereus G9842

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 7187478 7187479 BCG9842_B5319 BCG9842_B5318 dnaA dnaN1 TRUE 0.724 179.000 0.328 1.000 Y NA
 7187479 7187480 BCG9842_B5318 BCG9842_B5317 dnaN1   FALSE 0.353 128.000 0.103 1.000   NA
 7187480 7187481 BCG9842_B5317 BCG9842_B5316   recF TRUE 0.677 13.000 0.209 1.000   NA
 7187481 7187482 BCG9842_B5316 BCG9842_B5315 recF gyrB TRUE 0.947 40.000 0.249 0.004 Y NA
 7187482 7187483 BCG9842_B5315 BCG9842_B5314 gyrB gyrA TRUE 0.912 89.000 0.306 0.001 Y NA
 7187483 7187484 BCG9842_B5314 BCG9842_B5313 gyrA rrs_13 FALSE 0.025 270.000 0.000 NA   NA
 7187484 7187485 BCG9842_B5313 BCG9842_B5312 rrs_13   FALSE 0.144 148.000 0.000 NA   NA
 7187485 7187486 BCG9842_B5312 BCG9842_B5311     FALSE 0.487 7.000 0.000 NA   NA
 7187486 7187487 BCG9842_B5311 BCG9842_B5309   rrl_13 FALSE 0.169 94.000 0.000 NA   NA
 7187487 7187488 BCG9842_B5309 BCG9842_B5308 rrl_13 rrf_13 FALSE 0.251 49.000 0.000 NA   NA
 7187490 7187491 BCG9842_B5306 BCG9842_B5305 guaB dacA TRUE 0.608 105.000 0.304 1.000 N NA
 7187491 7187492 BCG9842_B5305 BCG9842_B5304 dacA   FALSE 0.406 162.000 0.017 1.000 N NA
 7187492 7187493 BCG9842_B5304 BCG9842_B5303     TRUE 0.952 19.000 0.488 NA Y NA
 7187493 7187494 BCG9842_B5303 BCG9842_B5302   serS FALSE 0.062 328.000 0.010 NA N NA
 7187494 7187495 BCG9842_B5302 BCG9842_B5301 serS   FALSE 0.127 155.000 0.000 NA   NA
 7187495 7187496 BCG9842_B5301 BCG9842_B5300     FALSE 0.096 167.000 0.000 NA   NA
 7187497 7187498 BCG9842_B5299 BCG9842_B5298     TRUE 0.984 3.000 0.255 0.001 Y NA
 7187498 7187499 BCG9842_B5298 BCG9842_B5297     TRUE 0.561 126.000 0.058 1.000 N NA
 7187500 7187501 BCG9842_B5296 BCG9842_B5295   srpB FALSE 0.065 193.000 0.000 NA   NA
 7187501 7187502 BCG9842_B5295 BCG9842_B5294 srpB dnaX FALSE 0.075 182.000 0.000 NA   NA
 7187502 7187503 BCG9842_B5294 BCG9842_B5293 dnaX   FALSE 0.478 23.000 0.071 NA   NA
 7187503 7187504 BCG9842_B5293 BCG9842_B5292   recR TRUE 0.768 15.000 0.604 NA   NA
 7187504 7187505 BCG9842_B5292 BCG9842_B5291 recR   FALSE 0.480 15.000 0.071 NA   NA
 7187505 7187506 BCG9842_B5291 BCG9842_B5290   bofA FALSE 0.268 163.000 0.417 NA   NA
 7187506 7187507 BCG9842_B5290 BCG9842_B5289 bofA rrs_12 FALSE 0.032 245.000 0.000 NA   NA
 7187507 7187508 BCG9842_B5289 BCG9842_B5288 rrs_12   FALSE 0.144 148.000 0.000 NA   NA
 7187508 7187509 BCG9842_B5288 BCG9842_B5287     FALSE 0.487 7.000 0.000 NA   NA
 7187509 7187510 BCG9842_B5287 BCG9842_B5285   rrl_12 FALSE 0.169 94.000 0.000 NA   NA
 7187510 7187511 BCG9842_B5285 BCG9842_B5284 rrl_12 rrf_12 FALSE 0.241 51.000 0.000 NA   NA
 7187511 7187512 BCG9842_B5284 BCG9842_B5283 rrf_12   FALSE 0.068 189.000 0.000 NA   NA
 7187512 7187513 BCG9842_B5283 BCG9842_B5282     FALSE 0.399 72.000 0.400 NA   NA
 7187513 7187514 BCG9842_B5282 BCG9842_B5281   tmk TRUE 0.889 2.000 0.009 1.000 N NA
 7187514 7187515 BCG9842_B5281 BCG9842_B5280 tmk holB TRUE 0.715 36.000 0.009 1.000 N NA
 7187515 7187516 BCG9842_B5280 BCG9842_B5279 holB   TRUE 0.734 6.000 0.372 NA   NA
 7187516 7187517 BCG9842_B5279 BCG9842_B5278     FALSE 0.490 15.000 0.183 NA   NA
 7187517 7187518 BCG9842_B5278 BCG9842_B5277     FALSE 0.233 83.000 0.193 NA   NA
 7187518 7187519 BCG9842_B5277 BCG9842_B5276     TRUE 0.659 14.000 0.209 1.000   NA
 7187519 7187520 BCG9842_B5276 BCG9842_B5275     TRUE 0.941 -31.000 0.041 1.000   NA
 7187522 7187523 BCG9842_B5273 BCG9842_B5272 metS   FALSE 0.332 167.000 0.221 NA N NA
 7187523 7187524 BCG9842_B5272 BCG9842_B5271     FALSE 0.492 216.000 0.058 NA Y NA
 7187524 7187525 BCG9842_B5271 BCG9842_B5270   ksgA TRUE 0.939 -3.000 0.093 1.000 N NA
 7187525 7187526 BCG9842_B5270 BCG9842_B5269 ksgA   FALSE 0.201 135.000 0.022 NA   NA
 7187526 7187527 BCG9842_B5269 BCG9842_B5268     FALSE 0.055 227.000 0.116 NA   NA
 7187527 7187528 BCG9842_B5268 BCG9842_B5267   sspF FALSE 0.226 92.000 0.163 NA   NA
 7187528 7187529 BCG9842_B5267 BCG9842_B5266 sspF ipk FALSE 0.137 197.000 0.024 1.000   NA
 7187529 7187530 BCG9842_B5266 BCG9842_B5265 ipk purR TRUE 0.638 55.000 0.062 1.000 N NA
 7187530 7187531 BCG9842_B5265 BCG9842_B5264 purR   FALSE 0.509 121.000 0.227 NA N NA
 7187531 7187532 BCG9842_B5264 BCG9842_B5263   spoVG FALSE 0.496 153.000 0.377 NA N NA
 7187532 7187533 BCG9842_B5263 BCG9842_B5262 spoVG gcaD FALSE 0.309 312.000 0.014 1.000 Y NA
 7187533 7187534 BCG9842_B5262 BCG9842_B5261 gcaD prsA TRUE 0.800 19.000 0.069 1.000 N NA
 7187534 7187535 BCG9842_B5261 BCG9842_B5260 prsA spoVC TRUE 0.833 10.000 0.010 1.000 N NA
 7187535 7187536 BCG9842_B5260 BCG9842_B5259 spoVC   FALSE 0.226 71.000 0.033 NA   NA
 7187536 7187537 BCG9842_B5259 BCG9842_B5258   mfd FALSE 0.213 106.000 0.035 NA   NA
 7187537 7187538 BCG9842_B5258 BCG9842_B5257 mfd spoVT TRUE 0.796 137.000 0.026 NA Y NA
 7187538 7187539 BCG9842_B5257 BCG9842_B5256 spoVT   FALSE 0.051 231.000 0.147 NA   NA
 7187539 7187540 BCG9842_B5256 BCG9842_B5255     TRUE 0.656 13.000 0.058 1.000   NA
 7187540 7187541 BCG9842_B5255 BCG9842_B5254     TRUE 0.620 15.000 0.054 1.000   NA
 7187541 7187542 BCG9842_B5254 BCG9842_B5253   yabP FALSE 0.277 59.000 0.108 NA   NA
 7187542 7187543 BCG9842_B5253 BCG9842_B5252 yabP yabQ TRUE 0.947 -3.000 0.774 NA   NA
 7187543 7187544 BCG9842_B5252 BCG9842_B5251 yabQ divIC1 TRUE 0.785 -3.000 0.074 NA   NA
 7187544 7187545 BCG9842_B5251 BCG9842_B5250 divIC1   TRUE 0.543 88.000 0.134 1.000 N NA
 7187545 7187546 BCG9842_B5250 BCG9842_B5249     FALSE 0.114 159.000 0.000 NA   NA
 7187546 7187547 BCG9842_B5249 BCG9842_B5248     FALSE 0.464 10.000 0.000 NA   NA
 7187547 7187548 BCG9842_B5248 BCG9842_B5247   spoIIE FALSE 0.028 256.000 0.000 NA   NA
 7187548 7187549 BCG9842_B5247 BCG9842_B5246 spoIIE tilS FALSE 0.187 231.000 0.041 1.000 N NA
 7187549 7187550 BCG9842_B5246 BCG9842_B5245 tilS hpt_2 TRUE 0.963 -3.000 0.067 0.046 N NA
 7187550 7187551 BCG9842_B5245 BCG9842_B5244 hpt_2 ftsH TRUE 0.553 86.000 0.192 1.000 N NA
 7187551 7187552 BCG9842_B5244 BCG9842_B5243 ftsH coaX FALSE 0.162 245.000 0.029 1.000 N NA
 7187552 7187553 BCG9842_B5243 BCG9842_B5242 coaX hslO TRUE 0.852 7.000 0.060 1.000 N NA
 7187553 7187554 BCG9842_B5242 BCG9842_B5241 hslO cysK1 TRUE 0.552 105.000 0.053 1.000 N NA
 7187554 7187555 BCG9842_B5241 BCG9842_B5240 cysK1 pabB TRUE 0.526 223.000 0.107 1.000 Y NA
 7187555 7187556 BCG9842_B5240 BCG9842_B5239 pabB pabA TRUE 0.982 6.000 0.452 0.016 Y NA
 7187556 7187557 BCG9842_B5239 BCG9842_B5238 pabA pabC TRUE 0.993 -6.000 0.532 1.000 Y NA
 7187557 7187558 BCG9842_B5238 BCG9842_B5237 pabC folP TRUE 0.982 2.000 0.519 1.000 Y NA
 7187558 7187559 BCG9842_B5237 BCG9842_B5236 folP folB TRUE 0.976 1.000 0.176 1.000 Y NA
 7187559 7187560 BCG9842_B5236 BCG9842_B5235 folB folK TRUE 0.984 -3.000 0.142 1.000 Y NA
 7187560 7187561 BCG9842_B5235 BCG9842_B5234 folK   TRUE 0.975 -48.000 0.027 1.000 N NA
 7187561 7187562 BCG9842_B5234 BCG9842_B5233     TRUE 0.779 24.000 0.016 1.000 N NA
 7187562 7187563 BCG9842_B5233 BCG9842_B5232   lysS TRUE 0.758 160.000 0.021 1.000 Y NA
 7187563 7187564 BCG9842_B5232 BCG9842_B5231 lysS rrs_11 FALSE 0.011 399.000 0.000 NA   NA
 7187564 7187565 BCG9842_B5231 BCG9842_B5229 rrs_11 rrl_11 FALSE 0.079 179.000 0.000 NA   NA
 7187565 7187566 BCG9842_B5229 BCG9842_B5228 rrl_11 rrf_11 FALSE 0.241 51.000 0.000 NA   NA
 7187566 7187567 BCG9842_B5228 BCG9842_B5227 rrf_11 ctsR FALSE 0.043 218.000 0.000 NA   NA
 7187567 7187568 BCG9842_B5227 BCG9842_B5226 ctsR   FALSE 0.375 171.000 0.681 NA   NA
 7187568 7187569 BCG9842_B5226 BCG9842_B5225     TRUE 0.920 5.000 0.848 1.000   NA
 7187569 7187570 BCG9842_B5225 BCG9842_B5224     TRUE 0.854 23.000 0.425 1.000 N NA
 7187570 7187571 BCG9842_B5224 BCG9842_B5223   radA TRUE 0.893 96.000 0.062 0.010 Y NA
 7187571 7187572 BCG9842_B5223 BCG9842_B5222 radA   TRUE 0.616 4.000 0.126 NA   NA
 7187572 7187573 BCG9842_B5222 BCG9842_B5221     FALSE 0.143 163.000 0.088 NA   NA
 7187573 7187574 BCG9842_B5221 BCG9842_B5220   ispD FALSE 0.468 17.000 0.108 NA   NA
 7187574 7187575 BCG9842_B5220 BCG9842_B5219 ispD ispF TRUE 0.884 117.000 0.419 1.000 Y NA
 7187575 7187576 BCG9842_B5219 BCG9842_B5218 ispF gltX TRUE 0.576 72.000 0.076 1.000 N NA
 7187576 7187577 BCG9842_B5218 BCG9842_B5217 gltX cysE FALSE 0.056 434.000 0.008 1.000 N NA
 7187577 7187578 BCG9842_B5217 BCG9842_B5216 cysE cysS TRUE 0.982 -19.000 0.039 0.045 N NA
 7187578 7187579 BCG9842_B5216 BCG9842_B5215 cysS   TRUE 0.765 3.000 0.129 1.000   NA
 7187579 7187580 BCG9842_B5215 BCG9842_B5214     TRUE 0.943 -3.000 0.150 0.003   NA
 7187580 7187581 BCG9842_B5214 BCG9842_B5213     TRUE 0.622 4.000 0.109 NA   NA
 7187581 7187582 BCG9842_B5213 BCG9842_B5212   sigH FALSE 0.384 68.000 0.361 NA   NA
 7187582 7187583 BCG9842_B5212 BCG9842_B5211 sigH secE FALSE 0.086 316.000 0.000 1.000 N NA
 7187583 7187584 BCG9842_B5211 BCG9842_B5210 secE nusG TRUE 0.784 132.000 0.843 1.000 N NA
 7187584 7187585 BCG9842_B5210 BCG9842_B5209 nusG rplK TRUE 0.602 168.000 0.681 1.000 N NA
 7187585 7187586 BCG9842_B5209 BCG9842_B5208 rplK rplA TRUE 0.885 178.000 0.838 0.018 Y NA
 7187586 7187587 BCG9842_B5208 BCG9842_B5206 rplA rplJ TRUE 0.630 234.000 0.302 0.018 Y NA
 7187587 7187588 BCG9842_B5206 BCG9842_B5205 rplJ rplL TRUE 0.956 68.000 0.884 0.013 Y NA
 7187588 7187589 BCG9842_B5205 BCG9842_B5204 rplL   TRUE 0.839 77.000 0.050 1.000 Y NA
 7187589 7187590 BCG9842_B5204 BCG9842_B5203   rpoB FALSE 0.109 292.000 0.008 1.000 N NA
 7187590 7187591 BCG9842_B5203 BCG9842_B5202 rpoB rpoC TRUE 0.976 38.000 0.851 0.002 Y NA
 7187591 7187592 BCG9842_B5202 BCG9842_B5201 rpoC   FALSE 0.485 114.000 0.065 NA N NA
 7187592 7187593 BCG9842_B5201 BCG9842_B5200   rpsL TRUE 0.828 115.000 0.239 NA Y NA
 7187593 7187594 BCG9842_B5200 BCG9842_B5199 rpsL rpsG TRUE 0.958 30.000 0.224 0.002 Y NA
 7187594 7187595 BCG9842_B5199 BCG9842_B5198 rpsG fusA TRUE 0.703 206.000 0.579 1.000 Y NA
 7187595 7187596 BCG9842_B5198 BCG9842_B5197 fusA tuf TRUE 0.929 118.000 0.400 0.001 Y NA
 7187596 7187597 BCG9842_B5197 BCG9842_B5196 tuf rpsJ FALSE 0.258 398.000 0.318 1.000 Y NA
 7187597 7187598 BCG9842_B5196 BCG9842_B5195 rpsJ rplC TRUE 0.961 35.000 0.467 0.018 Y NA
 7187598 7187599 BCG9842_B5195 BCG9842_B5194 rplC rplD TRUE 0.972 26.000 0.544 0.013 Y NA
 7187599 7187600 BCG9842_B5194 BCG9842_B5193 rplD rplW TRUE 0.988 0.000 0.307 0.013 Y NA
 7187600 7187601 BCG9842_B5193 BCG9842_B5192 rplW rplB TRUE 0.978 29.000 0.849 0.018 Y NA
 7187601 7187602 BCG9842_B5192 BCG9842_B5191 rplB rpsS TRUE 0.949 113.000 0.820 0.018 Y NA
 7187602 7187603 BCG9842_B5191 BCG9842_B5190 rpsS rplV TRUE 0.981 18.000 0.769 0.018 Y NA
 7187603 7187604 BCG9842_B5190 BCG9842_B5189 rplV rpsC TRUE 0.989 4.000 0.719 0.018 Y NA
 7187604 7187605 BCG9842_B5189 BCG9842_B5188 rpsC rplP TRUE 0.992 2.000 0.828 0.018 Y NA
 7187605 7187606 BCG9842_B5188 BCG9842_B5187 rplP rpmC TRUE 0.997 -10.000 0.802 0.013 Y NA
 7187606 7187607 BCG9842_B5187 BCG9842_B5186 rpmC rpsQ TRUE 0.983 21.000 0.828 0.013 Y NA
 7187607 7187608 BCG9842_B5186 BCG9842_B5185 rpsQ rplN TRUE 0.969 44.000 0.791 0.018 Y NA
 7187608 7187609 BCG9842_B5185 BCG9842_B5184 rplN rplX TRUE 0.943 39.000 0.071 0.018 Y NA
 7187609 7187610 BCG9842_B5184 BCG9842_B5183 rplX rplE TRUE 0.956 27.000 0.057 0.013 Y NA
 7187610 7187611 BCG9842_B5183 BCG9842_B5182 rplE rpsN TRUE 0.964 34.000 0.496 0.013 Y NA
 7187611 7187612 BCG9842_B5182 BCG9842_B5181 rpsN rpsH TRUE 0.966 30.000 0.473 0.013 Y NA
 7187612 7187613 BCG9842_B5181 BCG9842_B5180 rpsH rplF TRUE 0.976 33.000 0.808 0.013 Y NA
 7187613 7187614 BCG9842_B5180 BCG9842_B5179 rplF rplR TRUE 0.976 34.000 0.815 0.013 Y NA
 7187614 7187615 BCG9842_B5179 BCG9842_B5178 rplR rpsE TRUE 0.982 22.000 0.814 0.018 Y NA
 7187615 7187616 BCG9842_B5178 BCG9842_B5177 rpsE rpmD TRUE 0.983 14.000 0.789 0.018 Y NA
 7187616 7187617 BCG9842_B5177 BCG9842_B5176 rpmD rplO TRUE 0.972 34.000 0.653 0.002 Y NA
 7187617 7187618 BCG9842_B5176 BCG9842_B5175 rplO secY TRUE 0.964 0.000 0.730 1.000 N NA
 7187618 7187619 BCG9842_B5175 BCG9842_B5174 secY adk TRUE 0.661 55.000 0.241 1.000 N NA
 7187619 7187620 BCG9842_B5174 BCG9842_B5173 adk maP1 TRUE 0.763 36.000 0.290 1.000 N NA
 7187620 7187621 BCG9842_B5173 BCG9842_B5172 maP1 infA TRUE 0.856 69.000 0.160 1.000 Y NA
 7187621 7187622 BCG9842_B5172 BCG9842_B5171 infA rpmJ TRUE 0.580 36.000 0.257 1.000   NA
 7187622 7187623 BCG9842_B5171 BCG9842_B5170 rpmJ rpsM TRUE 0.805 22.000 0.194 0.013   NA
 7187623 7187624 BCG9842_B5170 BCG9842_B5169 rpsM rpsK TRUE 0.981 25.000 0.810 0.013 Y NA
 7187624 7187625 BCG9842_B5169 BCG9842_B5168 rpsK rpoA FALSE 0.388 181.000 0.308 1.000 N NA
 7187625 7187626 BCG9842_B5168 BCG9842_B5167 rpoA rplQ TRUE 0.889 36.000 0.873 1.000 N NA
 7187626 7187627 BCG9842_B5167 BCG9842_B5166 rplQ cbiO TRUE 0.558 104.000 0.074 1.000 N NA
 7187627 7187628 BCG9842_B5166 BCG9842_B5165 cbiO cbiO TRUE 0.998 -24.000 0.713 0.028 Y NA
 7187628 7187629 BCG9842_B5165 BCG9842_B5164 cbiO   TRUE 0.992 -12.000 0.139 1.000 Y NA
 7187629 7187630 BCG9842_B5164 BCG9842_B5163   truA TRUE 0.915 0.000 0.170 1.000 N NA
 7187630 7187631 BCG9842_B5163 BCG9842_B5161 truA rplM TRUE 0.796 153.000 0.052 1.000 Y NA
 7187631 7187632 BCG9842_B5161 BCG9842_B5160 rplM rpsI TRUE 0.978 22.000 0.601 0.013 Y NA
 7187632 7187633 BCG9842_B5160 BCG9842_B5159 rpsI   FALSE 0.130 162.000 0.021 NA   NA
 7187633 7187634 BCG9842_B5159 BCG9842_B5158   cwlD FALSE 0.280 67.000 0.211 NA   NA
 7187634 7187635 BCG9842_B5158 BCG9842_B5157 cwlD   TRUE 0.533 145.000 0.211 1.000 N NA
 7187639 7187640 BCG9842_B5153 BCG9842_B5152   rrs_10 FALSE 0.030 251.000 0.000 NA   NA
 7187640 7187641 BCG9842_B5152 BCG9842_B5150 rrs_10 rrl_10 FALSE 0.079 179.000 0.000 NA   NA
 7187641 7187642 BCG9842_B5150 BCG9842_B5149 rrl_10 rrf_10 FALSE 0.167 91.000 0.000 NA   NA
 7187642 7187643 BCG9842_B5149 BCG9842_B5148 rrf_10   FALSE 0.471 9.000 0.000 NA   NA
 7187643 7187644 BCG9842_B5148 BCG9842_B5147     TRUE 0.537 4.000 0.000 NA   NA
 7187644 7187645 BCG9842_B5147 BCG9842_B5146     FALSE 0.389 18.000 0.000 NA   NA
 7187645 7187646 BCG9842_B5146 BCG9842_B5145     TRUE 0.537 4.000 0.000 NA   NA
 7187646 7187647 BCG9842_B5145 BCG9842_B5144     FALSE 0.379 16.000 0.000 NA   NA
 7187647 7187648 BCG9842_B5144 BCG9842_B5143     FALSE 0.197 66.000 0.000 NA   NA
 7187648 7187649 BCG9842_B5143 BCG9842_B5142     FALSE 0.501 6.000 0.000 NA   NA
 7187649 7187650 BCG9842_B5142 BCG9842_B5141     FALSE 0.501 6.000 0.000 NA   NA
 7187650 7187651 BCG9842_B5141 BCG9842_B5140     FALSE 0.477 8.000 0.000 NA   NA
 7187651 7187652 BCG9842_B5140 BCG9842_B5139     FALSE 0.179 115.000 0.000 NA   NA
 7187652 7187653 BCG9842_B5139 BCG9842_B5138   rocF FALSE 0.217 211.000 0.000 1.000 N NA
 7187653 7187654 BCG9842_B5138 BCG9842_B5137 rocF   FALSE 0.031 249.000 0.000 NA   NA
 7187654 7187655 BCG9842_B5137 BCG9842_B5136     TRUE 0.941 -7.000 0.502 NA   NA
 7187655 7187656 BCG9842_B5136 BCG9842_B5135   glmM TRUE 0.842 -7.000 0.150 NA   NA
 7187656 7187657 BCG9842_B5135 BCG9842_B5134 glmM   FALSE 0.159 140.000 0.000 NA   NA
 7187657 7187658 BCG9842_B5134 BCG9842_B5133   glmS FALSE 0.066 192.000 0.000 NA   NA
 7187658 7187659 BCG9842_B5133 BCG9842_B5132 glmS   FALSE 0.129 261.000 0.000 1.000 N NA
 7187659 7187660 BCG9842_B5132 BCG9842_B5131     FALSE 0.230 108.000 0.100 NA   NA
 7187663 7187664 BCG9842_B5128 BCG9842_B5127     TRUE 0.997 -25.000 0.846 1.000 Y NA
 7187664 7187665 BCG9842_B5127 BCG9842_B5126     TRUE 0.974 13.000 0.880 NA Y NA
 7187665 7187666 BCG9842_B5126 BCG9842_B5124     FALSE 0.079 281.000 0.000 NA N NA
 7187667 7187668 BCG9842_B5123 BCG9842_B5122     FALSE 0.249 67.000 0.137 NA   NA
 7187668 7187669 BCG9842_B5122 BCG9842_B5121     TRUE 0.864 -3.000 0.052 1.000   NA
 7187669 7187670 BCG9842_B5121 BCG9842_B5120     FALSE 0.206 79.000 0.026 NA   NA
 7187670 7187671 BCG9842_B5120 BCG9842_B5119     FALSE 0.230 127.000 0.104 NA   NA
 7187675 7187676 BCG9842_B5114 BCG9842_B5113     TRUE 0.983 18.000 0.909 0.036 Y NA
 7187676 7187677 BCG9842_B5113 BCG9842_B5112     TRUE 0.995 -43.000 0.233 1.000 Y NA
 7187677 7187678 BCG9842_B5112 BCG9842_B5111     TRUE 0.991 -3.000 0.233 0.002 Y NA
 7187678 7187679 BCG9842_B5111 BCG9842_B5110     TRUE 0.952 14.000 0.292 1.000 Y NA
 7187682 7187683 BCG9842_B5107 BCG9842_B5106     FALSE 0.281 405.000 0.000 0.036 Y NA
 7187683 7187684 BCG9842_B5106 BCG9842_B5104     FALSE 0.024 390.000 0.000 1.000   NA
 7187684 7187685 BCG9842_B5104 BCG9842_B5103     TRUE 0.883 2.000 0.471 1.000   NA
 7187687 7187688 BCG9842_B5101 BCG9842_B5100   modB FALSE 0.153 300.000 0.000 0.073 N NA
 7187688 7187689 BCG9842_B5100 BCG9842_B5099 modB modA TRUE 0.984 6.000 0.430 0.001 Y NA
 7187692 7187693 BCG9842_B5096 BCG9842_B5095     TRUE 0.749 22.000 0.556 NA   NA
 7187693 7187694 BCG9842_B5095 BCG9842_B5094     FALSE 0.009 494.000 0.000 NA   NA
 7187694 7187695 BCG9842_B5094 BCG9842_B5093     FALSE 0.046 474.000 0.000 1.000 N NA
 7187695 7187696 BCG9842_B5093 BCG9842_B5092     FALSE 0.457 163.000 0.778 NA   NA
 7187696 7187697 BCG9842_B5092 BCG9842_B5091     TRUE 0.619 119.000 0.778 NA   NA
 7187697 7187698 BCG9842_B5091 BCG9842_B5090     TRUE 0.529 139.000 0.667 NA   NA
 7187698 7187699 BCG9842_B5090 BCG9842_B5089     FALSE 0.008 566.000 0.000 NA   NA
 7187699 7187700 BCG9842_B5089 BCG9842_B5088     FALSE 0.272 59.000 0.125 NA   NA
 7187703 7187704 BCG9842_B5085 BCG9842_B5084     TRUE 0.861 -27.000 0.000 NA   NA
 7187704 7187705 BCG9842_B5084 BCG9842_B5083     FALSE 0.319 33.000 0.000 NA   NA
 7187708 7187709 BCG9842_B5080 BCG9842_B5079     TRUE 0.915 104.000 0.444 0.036 Y NA
 7187709 7187710 BCG9842_B5079 BCG9842_B5078     TRUE 0.983 14.000 0.850 0.036 Y NA
 7187710 7187711 BCG9842_B5078 BCG9842_B5077     TRUE 0.978 11.000 0.750 1.000 Y NA
 7187711 7187712 BCG9842_B5077 BCG9842_B5076     TRUE 0.994 -3.000 0.500 0.002 Y NA
 7187714 7187715 BCG9842_B5074 BCG9842_B5073     FALSE 0.307 35.000 0.000 NA   NA
 7187715 7187716 BCG9842_B5073 BCG9842_B5072     FALSE 0.307 35.000 0.000 NA   NA
 7187716 7187717 BCG9842_B5072 BCG9842_B5071     FALSE 0.307 35.000 0.000 NA   NA
 7187717 7187718 BCG9842_B5071 BCG9842_B5070   hppD FALSE 0.012 394.000 0.000 NA   NA
 7187718 7187719 BCG9842_B5070 BCG9842_B5069 hppD   TRUE 0.592 67.000 0.118 1.000 N NA
 7187719 7187720 BCG9842_B5069 BCG9842_B5068     TRUE 0.994 -34.000 0.101 1.000 Y NA
 7187720 7187721 BCG9842_B5068 BCG9842_B5067     FALSE 0.167 234.000 0.000 1.000 N NA
 7187721 7187722 BCG9842_B5067 BCG9842_B5066     TRUE 0.891 110.000 0.500 1.000 Y NA
 7187722 7187723 BCG9842_B5066 BCG9842_B5065   ddl FALSE 0.150 244.000 0.000 1.000 N NA
 7187723 7187724 BCG9842_B5065 BCG9842_B5064 ddl murF TRUE 0.911 64.000 0.044 0.005 Y NA
 7187724 7187725 BCG9842_B5064 BCG9842_B5063 murF   FALSE 0.099 306.000 0.004 1.000 N NA
 7187725 7187726 BCG9842_B5063 BCG9842_B5061   uvsE TRUE 0.835 95.000 0.013 1.000 Y NA
 7187728 7187729 BCG9842_B5060 BCG9842_B5059 acpS   FALSE 0.460 94.000 0.038 NA N NA
 7187729 7187730 BCG9842_B5059 BCG9842_B5058   dal1 TRUE 0.824 118.000 0.194 NA Y NA
 7187730 7187731 BCG9842_B5058 BCG9842_B5057 dal1   FALSE 0.073 311.000 0.108 NA N NA
 7187731 7187732 BCG9842_B5057 BCG9842_B5056     TRUE 0.844 5.000 0.260 NA N NA
 7187732 7187733 BCG9842_B5056 BCG9842_B5055     TRUE 0.583 68.000 0.045 1.000 N NA
 7187733 7187734 BCG9842_B5055 BCG9842_B5054     FALSE 0.021 370.000 0.215 NA   NA
 7187734 7187735 BCG9842_B5054 BCG9842_B5053     FALSE 0.177 113.000 0.000 NA   NA
 7187735 7187736 BCG9842_B5053 BCG9842_B5052     TRUE 0.582 2.000 0.000 NA   NA
 7187736 7187737 BCG9842_B5052 BCG9842_B5051     FALSE 0.487 7.000 0.000 NA   NA
 7187737 7187738 BCG9842_B5051 BCG9842_B5050     TRUE 0.537 4.000 0.000 NA   NA
 7187738 7187739 BCG9842_B5050 BCG9842_B5049     FALSE 0.360 26.000 0.000 NA   NA
 7187739 7187740 BCG9842_B5049 BCG9842_B5048     TRUE 0.582 2.000 0.000 NA   NA
 7187740 7187741 BCG9842_B5048 BCG9842_B5047     FALSE 0.164 86.000 0.000 NA   NA
 7187741 7187742 BCG9842_B5047 BCG9842_B5046     FALSE 0.501 6.000 0.000 NA   NA
 7187742 7187743 BCG9842_B5046 BCG9842_B5045     FALSE 0.379 16.000 0.000 NA   NA
 7187743 7187744 BCG9842_B5045 BCG9842_B5044     FALSE 0.169 94.000 0.000 NA   NA
 7187744 7187745 BCG9842_B5044 BCG9842_B5043     FALSE 0.517 5.000 0.000 NA   NA
 7187745 7187746 BCG9842_B5043 BCG9842_B5042     TRUE 0.582 2.000 0.000 NA   NA
 7187746 7187747 BCG9842_B5042 BCG9842_B5041   rrs_9 FALSE 0.171 100.000 0.000 NA   NA
 7187747 7187748 BCG9842_B5041 BCG9842_B5039 rrs_9 rrl_9 FALSE 0.079 179.000 0.000 NA   NA
 7187748 7187749 BCG9842_B5039 BCG9842_B5038 rrl_9 rrf_9 FALSE 0.251 49.000 0.000 NA   NA
 7187749 7187750 BCG9842_B5038 BCG9842_B5037 rrf_9   FALSE 0.443 12.000 0.000 NA   NA
 7187750 7187751 BCG9842_B5037 BCG9842_B5036     TRUE 0.582 2.000 0.000 NA   NA
 7187751 7187752 BCG9842_B5036 BCG9842_B5035     FALSE 0.085 174.000 0.000 NA   NA
 7187752 7187753 BCG9842_B5035 BCG9842_B5034     TRUE 0.899 -19.000 0.217 NA   NA
 7187753 7187754 BCG9842_B5034 BCG9842_B5033   rimI TRUE 0.620 15.000 0.127 1.000   NA
 7187754 7187755 BCG9842_B5033 BCG9842_B5032 rimI   TRUE 0.822 0.000 0.090 1.000   NA
 7187758 7187759 BCG9842_B5029 BCG9842_B5028     TRUE 0.905 -3.000 0.480 NA   NA
 7187760 7187761 BCG9842_B5027 BCG9842_B5026 groES groEL TRUE 0.952 40.000 0.674 1.000 Y NA
 7187761 7187762 BCG9842_B5026 BCG9842_B5024 groEL guaA FALSE 0.056 407.000 0.000 1.000 N NA
 7187762 7187763 BCG9842_B5024 BCG9842_B5022 guaA   FALSE 0.025 387.000 0.000 1.000   NA
 7187763 7187764 BCG9842_B5022 BCG9842_B5021     FALSE 0.052 294.000 0.146 1.000   NA
 7187764 7187765 BCG9842_B5021 BCG9842_B5020     TRUE 0.998 -16.000 0.800 0.023 Y NA
 7187765 7187766 BCG9842_B5020 BCG9842_B5019   rrs_8 FALSE 0.017 320.000 0.000 NA   NA
 7187766 7187767 BCG9842_B5019 BCG9842_B5017 rrs_8 rrl_8 FALSE 0.079 179.000 0.000 NA   NA
 7187767 7187768 BCG9842_B5017 BCG9842_B5016 rrl_8 rrf_8 FALSE 0.246 50.000 0.000 NA   NA
 7187768 7187769 BCG9842_B5016 BCG9842_B5015 rrf_8   FALSE 0.021 290.000 0.000 NA   NA
 7187769 7187770 BCG9842_B5015 BCG9842_B5014     FALSE 0.277 200.000 0.171 1.000 N NA
 7187770 7187771 BCG9842_B5014 BCG9842_B5013   rrs_7 FALSE 0.012 375.000 0.000 NA   NA
 7187771 7187772 BCG9842_B5013 BCG9842_B5011 rrs_7 rrl_7 FALSE 0.079 179.000 0.000 NA   NA
 7187772 7187773 BCG9842_B5011 BCG9842_B5010 rrl_7 rrf_7 FALSE 0.246 50.000 0.000 NA   NA
 7187775 7187776 BCG9842_B5008 BCG9842_B5007   rrs_6 FALSE 0.006 1378.000 0.000 NA   NA
 7187776 7187777 BCG9842_B5007 BCG9842_B5005 rrs_6 rrl_6 FALSE 0.079 179.000 0.000 NA   NA
 7187777 7187778 BCG9842_B5005 BCG9842_B5004 rrl_6 rrf_6 FALSE 0.246 50.000 0.000 NA   NA
 7187779 7187780 BCG9842_B5003 BCG9842_B5002   bacA1 FALSE 0.013 357.000 0.000 NA   NA
 7187780 7187781 BCG9842_B5002 BCG9842_B5001 bacA1   TRUE 0.529 18.000 0.240 NA   NA
 7187781 7187782 BCG9842_B5001 BCG9842_B5000     TRUE 0.919 -7.000 0.400 NA   NA
 7187782 7187783 BCG9842_B5000 BCG9842_B4999     TRUE 0.730 69.000 0.556 1.000 N NA
 7187783 7187784 BCG9842_B4999 BCG9842_B4998     TRUE 0.994 -10.000 0.538 1.000 Y NA
 7187785 7187786 BCG9842_B4997 BCG9842_B4995 rrs_5 rrl_5 FALSE 0.079 179.000 0.000 NA   NA
 7187786 7187787 BCG9842_B4995 BCG9842_B4994 rrl_5 rrf_5 FALSE 0.246 50.000 0.000 NA   NA
 7187787 7187788 BCG9842_B4994 BCG9842_B4993 rrf_5   FALSE 0.047 213.000 0.000 NA   NA
 7187790 7187791 BCG9842_B4991 BCG9842_B4989 rrs_4 rrl_4 FALSE 0.079 179.000 0.000 NA   NA
 7187791 7187792 BCG9842_B4989 BCG9842_B4988 rrl_4 rrf_4 FALSE 0.246 50.000 0.000 NA   NA
 7187792 7187793 BCG9842_B4988 BCG9842_B4986 rrf_4 purE FALSE 0.007 740.000 0.000 NA   NA
 7187793 7187794 BCG9842_B4986 BCG9842_B4985 purE purK TRUE 0.991 -3.000 0.038 0.001 Y NA
 7187794 7187795 BCG9842_B4985 BCG9842_B4984 purK purB_2 TRUE 0.984 -3.000 0.033 1.000 Y NA
 7187795 7187796 BCG9842_B4984 BCG9842_B4983 purB_2 purC TRUE 0.836 89.000 0.072 1.000 Y NA
 7187796 7187797 BCG9842_B4983 BCG9842_B4982 purC   TRUE 0.993 -7.000 0.460 1.000 Y NA
 7187797 7187798 BCG9842_B4982 BCG9842_B4981   purQ TRUE 0.995 -3.000 0.656 0.001 Y NA
 7187798 7187799 BCG9842_B4981 BCG9842_B4980 purQ purL TRUE 0.996 -16.000 0.346 0.001 Y NA
 7187799 7187800 BCG9842_B4980 BCG9842_B4979 purL purF TRUE 0.993 -15.000 0.223 1.000 Y NA
 7187800 7187801 BCG9842_B4979 BCG9842_B4978 purF purM TRUE 0.850 106.000 0.248 1.000 Y NA
 7187801 7187802 BCG9842_B4978 BCG9842_B4977 purM purN TRUE 0.991 -3.000 0.238 0.002 Y NA
 7187802 7187803 BCG9842_B4977 BCG9842_B4976 purN purH TRUE 0.940 25.000 0.225 1.000 Y NA
 7187803 7187804 BCG9842_B4976 BCG9842_B4975 purH purD TRUE 0.541 223.000 0.238 1.000 Y NA
 7187805 7187806 BCG9842_B4974 BCG9842_B4973     TRUE 0.733 16.000 0.549 NA   NA
 7187806 7187807 BCG9842_B4973 BCG9842_B4972     FALSE 0.042 220.000 0.000 NA   NA
 7187808 7187809 BCG9842_B4971 BCG9842_B4970     FALSE 0.200 85.000 0.023 NA   NA
 7187809 7187810 BCG9842_B4970 BCG9842_B4969   pcrA TRUE 0.676 1.000 0.049 NA   NA
 7187810 7187811 BCG9842_B4969 BCG9842_B4968 pcrA ligA TRUE 0.962 15.000 0.103 0.013 Y NA
 7187811 7187812 BCG9842_B4968 BCG9842_B4967 ligA   FALSE 0.433 17.000 0.009 NA   NA
 7187812 7187813 BCG9842_B4967 BCG9842_B4966     TRUE 0.612 97.000 0.800 NA   NA
 7187813 7187814 BCG9842_B4966 BCG9842_B4965     FALSE 0.298 154.000 0.205 1.000   NA
 7187816 7187817 BCG9842_B4962 BCG9842_B4961     TRUE 0.992 -10.000 0.233 1.000 Y NA
 7187817 7187818 BCG9842_B4961 BCG9842_B4960     TRUE 0.934 22.000 0.233 NA Y NA
 7187819 7187820 BCG9842_B4959 BCG9842_B4958     TRUE 0.640 62.000 0.750 NA   NA
 7187820 7187821 BCG9842_B4958 BCG9842_B4957     TRUE 0.954 -7.000 0.636 NA   NA
 7187821 7187822 BCG9842_B4957 BCG9842_B4956     TRUE 0.737 79.000 0.667 1.000 N NA
 7187823 7187824 BCG9842_B4955 BCG9842_B4954   gatC FALSE 0.185 142.000 0.009 NA   NA
 7187824 7187825 BCG9842_B4954 BCG9842_B4953 gatC gatA TRUE 0.980 16.000 0.643 0.001 Y NA
 7187825 7187826 BCG9842_B4953 BCG9842_B4952 gatA gatB TRUE 0.976 15.000 0.492 0.001 Y NA
 7187826 7187827 BCG9842_B4952 BCG9842_B4951 gatB   FALSE 0.044 562.000 0.034 1.000 N NA
 7187827 7187828 BCG9842_B4951 BCG9842_B4950     FALSE 0.316 141.000 0.028 1.000   NA
 7187828 7187829 BCG9842_B4950 BCG9842_B4949   gabT FALSE 0.271 155.000 0.045 1.000   NA
 7187829 7187830 BCG9842_B4949 BCG9842_B4948 gabT   TRUE 0.667 116.000 0.409 1.000 N NA
 7187830 7187831 BCG9842_B4948 BCG9842_B4947   gabD TRUE 0.979 -7.000 0.583 1.000 N NA
 7187831 7187832 BCG9842_B4947 BCG9842_B4946 gabD   TRUE 0.676 48.000 0.157 1.000 N NA
 7187832 7187833 BCG9842_B4946 BCG9842_B4945     FALSE 0.350 133.000 0.078 1.000   NA
 7187834 7187835 BCG9842_B4944 BCG9842_B4943 ampS   TRUE 0.605 117.000 0.258 1.000 N NA
 7187835 7187836 BCG9842_B4943 BCG9842_B4942     FALSE 0.144 148.000 0.000 NA   NA
 7187839 7187840 BCG9842_B4938 BCG9842_B4937     TRUE 0.744 162.000 0.008 1.000 Y NA
 7187840 7187841 BCG9842_B4937 BCG9842_B4936     FALSE 0.015 340.000 0.000 NA   NA
 7187841 7187842 BCG9842_B4936 BCG9842_B4935     FALSE 0.216 95.000 0.043 NA   NA
 7187842 7187843 BCG9842_B4935 BCG9842_B4934     FALSE 0.251 49.000 0.000 NA   NA
 7187844 7187845 BCG9842_B4933 BCG9842_B4932     TRUE 0.772 15.000 0.189 0.087   NA
 7187848 7187849 BCG9842_B4929 BCG9842_B4928 amhX   FALSE 0.116 194.000 0.263 NA   NA
 7187850 7187851 BCG9842_B4927 BCG9842_B4926 ahpF ahpC TRUE 0.963 15.000 0.551 1.000 Y NA
 7187852 7187853 BCG9842_B4925 BCG9842_B4924   mtnA TRUE 0.687 10.000 0.042 1.000   NA
 7187853 7187854 BCG9842_B4924 BCG9842_B4923 mtnA   TRUE 0.634 54.000 0.017 1.000 N NA
 7187855 7187856 BCG9842_B4922 BCG9842_B4921     TRUE 0.993 -3.000 0.857 1.000 Y NA
 7187856 7187857 BCG9842_B4921 BCG9842_B4920     TRUE 0.927 49.000 0.487 1.000 Y NA
 7187860 7187861 BCG9842_B4917 BCG9842_B4916     FALSE 0.035 235.000 0.000 NA   NA
 7187861 7187862 BCG9842_B4916 BCG9842_B4915     TRUE 0.728 21.000 0.500 NA   NA
 7187862 7187863 BCG9842_B4915 BCG9842_B4914     FALSE 0.183 163.000 0.267 NA   NA
 7187863 7187864 BCG9842_B4914 BCG9842_B4913     FALSE 0.034 239.000 0.000 NA   NA
 7187864 7187865 BCG9842_B4913 BCG9842_B4912     FALSE 0.191 138.000 0.007 NA   NA
 7187865 7187866 BCG9842_B4912 BCG9842_B4911     FALSE 0.038 230.000 0.000 NA   NA
 7187868 7187869 BCG9842_B4908 BCG9842_B4907     FALSE 0.236 112.000 0.068 NA   NA
 7187870 7187871 BCG9842_B4906 BCG9842_B4905     FALSE 0.310 146.000 0.053 1.000   NA
 7187873 7187874 BCG9842_B4903 BCG9842_B4902     TRUE 0.887 111.000 0.130 0.047 Y NA
 7187874 7187875 BCG9842_B4902 BCG9842_B4901     TRUE 0.873 122.000 0.348 1.000 Y NA
 7187876 7187877 BCG9842_B4900 BCG9842_B4899   argR_2 FALSE 0.508 147.000 0.139 1.000 N NA
 7187877 7187878 BCG9842_B4899 BCG9842_B4898 argR_2 arcA FALSE 0.120 269.000 0.000 1.000 N NA
 7187878 7187879 BCG9842_B4898 BCG9842_B4897 arcA argF_2 TRUE 0.926 31.000 0.146 1.000 Y NA
 7187879 7187880 BCG9842_B4897 BCG9842_B4896 argF_2   TRUE 0.844 100.000 0.188 1.000 Y NA
 7187880 7187881 BCG9842_B4896 BCG9842_B4895   arcC TRUE 0.961 38.000 0.818 1.000 Y NA
 7187881 7187882 BCG9842_B4895 BCG9842_B4894 arcC   FALSE 0.269 202.000 0.088 1.000 N NA
 7187882 7187883 BCG9842_B4894 BCG9842_B4893     FALSE 0.170 157.000 0.176 NA   NA
 7187885 7187886 BCG9842_B4891 BCG9842_B4890     TRUE 0.589 206.000 0.167 1.000 Y NA
 7187886 7187887 BCG9842_B4890 BCG9842_B4889     TRUE 0.849 5.000 0.610 NA   NA
 7187887 7187888 BCG9842_B4889 BCG9842_B4888     FALSE 0.019 305.000 0.000 NA   NA
 7187890 7187891 BCG9842_B4885 BCG9842_B4884 thiM thiE TRUE 0.964 18.000 0.061 0.004 Y NA
 7187893 7187894 BCG9842_B4882 BCG9842_B4881     TRUE 0.636 136.000 0.400 1.000 N NA
 7187894 7187895 BCG9842_B4881 BCG9842_B4879     FALSE 0.028 256.000 0.000 NA   NA
 7187895 7187896 BCG9842_B4879 BCG9842_B4878     TRUE 0.939 -22.000 0.364 NA   NA
 7187896 7187897 BCG9842_B4878 BCG9842_B4877     TRUE 0.989 -3.000 0.584 NA Y NA
 7187897 7187898 BCG9842_B4877 BCG9842_B4876     TRUE 0.988 -3.000 0.554 NA Y NA
 7187898 7187899 BCG9842_B4876 BCG9842_B4875     FALSE 0.055 396.000 0.000 0.027   NA
 7187901 7187902 BCG9842_B4873 BCG9842_B4872     TRUE 0.546 11.000 0.065 NA   NA
 7187902 7187903 BCG9842_B4872 BCG9842_B4871     FALSE 0.472 14.000 0.037 NA   NA
 7187903 7187904 BCG9842_B4871 BCG9842_B4870     FALSE 0.501 126.000 0.571 NA   NA
 7187904 7187905 BCG9842_B4870 BCG9842_B4869     FALSE 0.444 81.000 0.500 NA   NA
 7187905 7187906 BCG9842_B4869 BCG9842_B4868     TRUE 0.610 67.000 0.714 NA   NA
 7187906 7187907 BCG9842_B4868 BCG9842_B4867     FALSE 0.349 114.000 0.333 NA   NA
 7187908 7187909 BCG9842_B4866 BCG9842_B4865     FALSE 0.232 109.000 0.068 NA   NA
 7187910 7187911 BCG9842_B4864 BCG9842_B4863   proS1 FALSE 0.014 351.000 0.000 NA   NA
 7187913 7187914 BCG9842_B4861 BCG9842_B4860     TRUE 0.555 129.000 0.145 1.000 N NA
 7187914 7187915 BCG9842_B4860 BCG9842_B4859     TRUE 0.969 24.000 0.364 0.003 Y NA
 7187915 7187916 BCG9842_B4859 BCG9842_B4858     TRUE 0.931 86.000 0.571 0.003 Y NA
 7187916 7187917 BCG9842_B4858 BCG9842_B4857     TRUE 0.623 73.000 0.308 1.000 N NA
 7187917 7187918 BCG9842_B4857 BCG9842_B4856     FALSE 0.283 110.000 0.256 NA   NA
 7187918 7187919 BCG9842_B4856 BCG9842_B4855     TRUE 0.812 19.000 0.727 NA   NA
 7187920 7187921 BCG9842_B4854 BCG9842_B4853     FALSE 0.087 193.000 0.125 NA   NA
 7187922 7187923 BCG9842_B4852 BCG9842_B4851     FALSE 0.274 54.000 0.019 NA   NA
 7187923 7187924 BCG9842_B4851 BCG9842_B4850   yihY TRUE 0.655 7.000 0.273 NA   NA
 7187924 7187925 BCG9842_B4850 BCG9842_B4849 yihY   FALSE 0.269 44.000 0.000 NA   NA
 7187927 7187928 BCG9842_B4847 BCG9842_B4846     FALSE 0.227 118.000 0.039 NA   NA
 7187928 7187929 BCG9842_B4846 BCG9842_B4845   lepB_3 FALSE 0.165 182.000 0.017 1.000   NA
 7187932 7187933 BCG9842_B4842 BCG9842_B4841     FALSE 0.068 210.000 0.129 NA   NA
 7187933 7187934 BCG9842_B4841 BCG9842_B4840     FALSE 0.171 155.000 0.111 NA   NA
 7187935 7187936 BCG9842_B4839 BCG9842_B4838 cax   FALSE 0.125 178.000 0.212 NA   NA
 7187938 7187939 BCG9842_B4836 BCG9842_B4835   fumA FALSE 0.074 207.000 0.093 NA   NA
 7187939 7187940 BCG9842_B4835 BCG9842_B4834 fumA pdaA TRUE 0.570 126.000 0.185 1.000 N NA
 7187940 7187941 BCG9842_B4834 BCG9842_B4833 pdaA   TRUE 0.619 60.000 0.160 1.000 N NA
 7187941 7187942 BCG9842_B4833 BCG9842_B4832     TRUE 0.838 11.000 0.164 1.000 N NA
 7187942 7187943 BCG9842_B4832 BCG9842_B4831     FALSE 0.062 250.000 0.000 1.000   NA
 7187943 7187944 BCG9842_B4831 BCG9842_B4830   truA2 TRUE 0.558 115.000 0.500 1.000   NA
 7187945 7187946 BCG9842_B4829 BCG9842_B4828   rocR1 FALSE 0.307 85.000 0.304 NA   NA
 7187947 7187948 BCG9842_B4827 BCG9842_B4826     TRUE 0.530 106.000 0.636 NA   NA
 7187948 7187949 BCG9842_B4826 BCG9842_B4825     TRUE 0.852 96.000 0.259 1.000 Y NA
 7187951 7187952 BCG9842_B4823 BCG9842_B4822     FALSE 0.444 115.000 0.462 NA   NA
 7187953 7187954 BCG9842_B4821 BCG9842_B4820   glsA1 FALSE 0.234 159.000 0.320 NA   NA
 7187955 7187956 BCG9842_B4819 BCG9842_B4818     FALSE 0.137 254.000 0.000 1.000 N NA
 7187956 7187957 BCG9842_B4818 BCG9842_B4817     FALSE 0.288 156.000 0.385 NA   NA
 7187957 7187958 BCG9842_B4817 BCG9842_B4816     TRUE 0.794 17.000 0.692 NA   NA
 7187958 7187959 BCG9842_B4816 BCG9842_B4815     TRUE 0.799 14.000 0.667 NA   NA
 7187959 7187960 BCG9842_B4815 BCG9842_B4814     TRUE 0.993 -10.000 0.533 NA Y NA
 7187960 7187961 BCG9842_B4814 BCG9842_B4813     TRUE 0.985 -3.000 0.064 1.000 Y NA
 7187961 7187962 BCG9842_B4813 BCG9842_B4812     TRUE 0.838 -7.000 0.050 NA   NA
 7187962 7187963 BCG9842_B4812 BCG9842_B4811   pfl FALSE 0.015 342.000 0.000 NA   NA
 7187963 7187964 BCG9842_B4811 BCG9842_B4810 pfl pflA TRUE 0.578 70.000 0.135 1.000 N NA
 7187964 7187965 BCG9842_B4810 BCG9842_B4809 pflA   FALSE 0.055 414.000 0.000 1.000 N NA
 7187966 7187967 BCG9842_B4808 BCG9842_B4807     FALSE 0.461 110.000 0.500 NA   NA
 7187967 7187968 BCG9842_B4807 BCG9842_B4806     FALSE 0.111 242.000 0.000 NA N NA
 7187968 7187969 BCG9842_B4806 BCG9842_B4805     FALSE 0.347 140.000 0.200 1.000   NA
 7187970 7187971 BCG9842_B4804 BCG9842_B4803 recX   FALSE 0.478 14.000 0.045 NA   NA
 7187977 7187978 BCG9842_B4797 BCG9842_B4796     TRUE 0.747 0.000 0.227 NA   NA
 7187978 7187979 BCG9842_B4796 BCG9842_B4795     FALSE 0.327 60.000 0.250 NA   NA
 7187979 7187980 BCG9842_B4795 BCG9842_B4794     FALSE 0.016 391.000 0.058 NA   NA
 7187980 7187981 BCG9842_B4794 BCG9842_B4793     TRUE 0.556 56.000 0.077 NA N NA
 7187982 7187983 BCG9842_B4792 BCG9842_B4791     FALSE 0.019 357.000 0.066 NA   NA
 7187983 7187984 BCG9842_B4791 BCG9842_B4790   hemL1 FALSE 0.271 199.000 0.036 1.000 N NA
 7187985 7187986 BCG9842_B4789 BCG9842_B4788     TRUE 0.936 -7.000 0.488 NA   NA
 7187986 7187987 BCG9842_B4788 BCG9842_B4787     TRUE 0.813 5.000 0.500 NA   NA
 7187987 7187988 BCG9842_B4787 BCG9842_B4786     FALSE 0.249 73.000 0.188 NA   NA
 7187988 7187989 BCG9842_B4786 BCG9842_B4785   bcP FALSE 0.312 45.000 0.015 NA   NA
 7187989 7187990 BCG9842_B4785 BCG9842_B4784 bcP   FALSE 0.104 300.000 0.005 1.000 N NA
 7187990 7187991 BCG9842_B4784 BCG9842_B4783     FALSE 0.194 171.000 0.024 1.000   NA
 7187993 7187994 BCG9842_B4781 BCG9842_B4779 rrs_3 rrl_3 FALSE 0.079 179.000 0.000 NA   NA
 7187994 7187995 BCG9842_B4779 BCG9842_B4778 rrl_3 rrf_3 FALSE 0.171 101.000 0.000 NA   NA
 7187995 7187996 BCG9842_B4778 BCG9842_B4777 rrf_3   FALSE 0.477 8.000 0.000 NA   NA
 7187996 7187997 BCG9842_B4777 BCG9842_B4776     TRUE 0.605 1.000 0.000 NA   NA
 7187997 7187998 BCG9842_B4776 BCG9842_B4775     FALSE 0.379 16.000 0.000 NA   NA
 7187998 7187999 BCG9842_B4775 BCG9842_B4774     TRUE 0.558 3.000 0.000 NA   NA
 7187999 7188000 BCG9842_B4774 BCG9842_B4773     FALSE 0.368 25.000 0.000 NA   NA
 7188000 7188001 BCG9842_B4773 BCG9842_B4772     TRUE 0.582 2.000 0.000 NA   NA
 7188001 7188002 BCG9842_B4772 BCG9842_B4771     FALSE 0.471 9.000 0.000 NA   NA
 7188002 7188003 BCG9842_B4771 BCG9842_B4770     FALSE 0.394 19.000 0.000 NA   NA
 7188003 7188004 BCG9842_B4770 BCG9842_B4769     FALSE 0.456 11.000 0.000 NA   NA
 7188004 7188005 BCG9842_B4769 BCG9842_B4768     FALSE 0.487 7.000 0.000 NA   NA
 7188005 7188006 BCG9842_B4768 BCG9842_B4767     FALSE 0.389 18.000 0.000 NA   NA
 7188006 7188007 BCG9842_B4767 BCG9842_B4766     FALSE 0.202 63.000 0.000 NA   NA
 7188007 7188008 BCG9842_B4766 BCG9842_B4765     FALSE 0.501 6.000 0.000 NA   NA
 7188008 7188009 BCG9842_B4765 BCG9842_B4764     FALSE 0.387 15.000 0.000 NA   NA
 7188009 7188010 BCG9842_B4764 BCG9842_B4763     FALSE 0.487 7.000 0.000 NA   NA
 7188012 7188013 BCG9842_B4761 BCG9842_B4760     FALSE 0.176 146.000 0.008 NA   NA
 7188013 7188014 BCG9842_B4760 BCG9842_B4759     FALSE 0.016 581.000 0.000 1.000   NA
 7188014 7188015 BCG9842_B4759 BCG9842_B4758     FALSE 0.162 188.000 0.123 1.000   NA
 7188015 7188016 BCG9842_B4758 BCG9842_B4757     FALSE 0.180 116.000 0.000 NA   NA
 7188016 7188017 BCG9842_B4757 BCG9842_B4756     FALSE 0.055 203.000 0.000 NA   NA
 7188017 7188018 BCG9842_B4756 BCG9842_B4755     FALSE 0.350 45.000 0.174 NA   NA
 7188018 7188019 BCG9842_B4755 BCG9842_B4754     FALSE 0.280 59.000 0.097 NA   NA
 7188019 7188020 BCG9842_B4754 BCG9842_B4753     TRUE 0.545 128.000 0.012 1.000 N NA
 7188020 7188021 BCG9842_B4753 BCG9842_B4752     FALSE 0.182 393.000 0.000 NA Y NA
 7188021 7188022 BCG9842_B4752 BCG9842_B4751   yhbH FALSE 0.056 452.000 0.683 NA   NA
 7188022 7188023 BCG9842_B4751 BCG9842_B4750 yhbH   FALSE 0.206 129.000 0.018 NA   NA
 7188025 7188026 BCG9842_B4748 BCG9842_B4747     FALSE 0.031 247.000 0.000 NA   NA
 7188026 7188027 BCG9842_B4747 BCG9842_B4746     TRUE 0.730 13.000 0.464 NA   NA
 7188027 7188028 BCG9842_B4746 BCG9842_B4745     FALSE 0.030 250.000 0.000 NA   NA
 7188028 7188029 BCG9842_B4745 BCG9842_B4744     TRUE 0.914 151.000 0.600 0.017 Y NA
 7188029 7188030 BCG9842_B4744 BCG9842_B4743     TRUE 0.990 3.000 0.818 0.087 Y NA
 7188032 7188033 BCG9842_B4741 BCG9842_B4740     FALSE 0.213 136.000 0.130 NA   NA
 7188033 7188034 BCG9842_B4740 BCG9842_B4739     FALSE 0.010 442.000 0.000 NA   NA
 7188034 7188035 BCG9842_B4739 BCG9842_B4738     FALSE 0.180 152.000 0.118 NA   NA
 7188035 7188036 BCG9842_B4738 BCG9842_B4737     FALSE 0.018 309.000 0.000 NA   NA
 7188036 7188037 BCG9842_B4737 BCG9842_B4736     TRUE 0.946 -3.000 0.262 1.000 N NA
 7188037 7188038 BCG9842_B4736 BCG9842_B4735     TRUE 0.988 0.000 0.391 0.035 Y NA
 7188038 7188039 BCG9842_B4735 BCG9842_B4734     TRUE 0.995 -3.000 0.848 0.035 Y NA
 7188039 7188040 BCG9842_B4734 BCG9842_B4733     TRUE 0.979 22.000 0.708 0.035 Y NA
 7188040 7188041 BCG9842_B4733 BCG9842_B4732     FALSE 0.016 558.000 0.000 1.000   NA
 7188041 7188042 BCG9842_B4732 BCG9842_B4731     FALSE 0.149 196.000 0.091 1.000   NA
 7188042 7188043 BCG9842_B4731 BCG9842_B4730     TRUE 0.991 -3.000 0.606 1.000 Y NA
 7188043 7188044 BCG9842_B4730 BCG9842_B4729     FALSE 0.234 70.000 0.043 NA   NA
 7188044 7188045 BCG9842_B4729 BCG9842_B4728     TRUE 0.606 17.000 0.333 NA   NA
 7188045 7188046 BCG9842_B4728 BCG9842_B4727     TRUE 0.776 14.000 0.600 NA   NA
 7188046 7188047 BCG9842_B4727 BCG9842_B4726     FALSE 0.023 281.000 0.000 NA   NA
 7188047 7188048 BCG9842_B4726 BCG9842_B4725     TRUE 0.894 79.000 0.229 0.017 Y NA
 7188048 7188049 BCG9842_B4725 BCG9842_B4724     TRUE 0.990 -3.000 0.229 0.087 Y NA
 7188049 7188050 BCG9842_B4724 BCG9842_B4723     TRUE 0.593 123.000 0.243 1.000 N NA
 7188050 7188051 BCG9842_B4723 BCG9842_B4722     TRUE 0.904 60.000 0.432 1.000 Y NA
 7188052 7188053 BCG9842_B4721 BCG9842_B4720     FALSE 0.179 196.000 0.429 NA   NA
 7188055 7188056 BCG9842_B4718 BCG9842_B4717     TRUE 0.567 146.000 0.636 1.000   NA
 7188056 7188057 BCG9842_B4717 BCG9842_B4716     TRUE 0.927 66.000 0.727 1.000 Y NA
 7188057 7188058 BCG9842_B4716 BCG9842_B4715     FALSE 0.052 342.000 0.000 NA N NA
 7188060 7188061 BCG9842_B4713 BCG9842_B4712     FALSE 0.043 264.000 0.222 NA   NA
 7188061 7188062 BCG9842_B4712 BCG9842_B4711   fdhD1 FALSE 0.178 228.000 0.000 1.000 N NA
 7188063 7188064 BCG9842_B4710 BCG9842_B4709     TRUE 0.621 13.000 0.300 NA   NA
 7188064 7188065 BCG9842_B4709 BCG9842_B4708     FALSE 0.164 156.000 0.143 NA   NA
 7188065 7188066 BCG9842_B4708 BCG9842_B4707   ald1 FALSE 0.064 370.000 0.000 1.000 N NA
 7188066 7188067 BCG9842_B4707 BCG9842_B4706 ald1   TRUE 0.927 104.000 0.889 1.000 Y NA
 7188067 7188068 BCG9842_B4706 BCG9842_B4705     FALSE 0.086 316.000 0.000 1.000 N NA
 7188068 7188069 BCG9842_B4705 BCG9842_B4704     TRUE 0.795 24.000 0.203 1.000 N NA
 7188071 7188072 BCG9842_B4702 BCG9842_B4701     FALSE 0.522 15.000 0.231 NA   NA
 7188072 7188073 BCG9842_B4701 BCG9842_B4700     FALSE 0.170 169.000 0.273 NA   NA
 7188075 7188076 BCG9842_B4698 BCG9842_B4697     TRUE 0.805 17.000 0.727 NA   NA
 7188077 7188078 BCG9842_B4696 BCG9842_B4695     FALSE 0.119 235.000 0.000 NA N NA
 7188078 7188079 BCG9842_B4695 BCG9842_B4694     FALSE 0.085 332.000 0.333 NA N NA
 7188080 7188081 BCG9842_B4693 BCG9842_B4692     FALSE 0.205 130.000 0.019 NA   NA
 7188081 7188082 BCG9842_B4692 BCG9842_B4691   aspA FALSE 0.248 174.000 0.444 NA   NA
 7188084 7188085 BCG9842_B4689 BCG9842_B4688     FALSE 0.013 361.000 0.000 NA   NA
 7188085 7188086 BCG9842_B4688 BCG9842_B4687   sspH FALSE 0.185 192.000 0.261 1.000   NA
 7188087 7188088 BCG9842_B4686 BCG9842_B4685     FALSE 0.062 381.000 0.000 1.000 N NA
 7188089 7188090 BCG9842_B4684 BCG9842_B4683     TRUE 0.991 -3.000 0.273 0.035 Y NA
 7188090 7188091 BCG9842_B4683 BCG9842_B4682     TRUE 0.954 13.000 0.273 1.000 Y NA
 7188093 7188094 BCG9842_B4680 BCG9842_B4679     TRUE 0.690 45.000 0.165 1.000 N NA
 7188094 7188095 BCG9842_B4679 BCG9842_B4678     TRUE 0.608 60.000 0.025 1.000 N NA
 7188096 7188097 BCG9842_B4677 BCG9842_B4676     TRUE 0.902 4.000 0.822 NA   NA
 7188097 7188098 BCG9842_B4676 BCG9842_B4675   cls1 FALSE 0.353 128.000 0.156 1.000   NA
 7188099 7188100 BCG9842_B4674 BCG9842_B4673     FALSE 0.009 483.000 0.000 NA   NA
 7188102 7188103 BCG9842_B4671 BCG9842_B4670 treR treB TRUE 0.525 143.000 0.115 1.000 N NA
 7188103 7188104 BCG9842_B4670 BCG9842_B4669 treB treC TRUE 0.969 14.000 0.650 1.000 Y NA
 7188105 7188106 BCG9842_B4668 BCG9842_B4667 gerKC gerKB TRUE 0.990 -19.000 0.833 0.010   NA
 7188106 7188107 BCG9842_B4667 BCG9842_B4666 gerKB gerKA TRUE 0.980 -19.000 0.412 0.010   NA
 7188108 7188109 BCG9842_B4665 BCG9842_B4664     FALSE 0.420 157.000 0.462 1.000   NA
 7188109 7188110 BCG9842_B4664 BCG9842_B4663     TRUE 0.836 135.000 0.093 1.000 Y NA
 7188110 7188111 BCG9842_B4663 BCG9842_B4662     TRUE 0.960 13.000 0.389 1.000 Y NA
 7188111 7188112 BCG9842_B4662 BCG9842_B4661     TRUE 0.892 88.000 0.280 0.046 Y NA
 7188112 7188113 BCG9842_B4661 BCG9842_B4660     TRUE 0.993 1.000 0.947 0.007 Y NA
 7188113 7188114 BCG9842_B4660 BCG9842_B4659     TRUE 0.656 205.000 0.000 0.070 Y NA
 7188114 7188115 BCG9842_B4659 BCG9842_B4658     TRUE 0.976 -25.000 0.242 1.000 N NA
 7188115 7188116 BCG9842_B4658 BCG9842_B4657     TRUE 0.604 64.000 0.111 1.000 N NA
 7188116 7188117 BCG9842_B4657 BCG9842_B4656     FALSE 0.341 180.000 0.079 1.000 N NA
 7188117 7188118 BCG9842_B4656 BCG9842_B4655     TRUE 0.904 -34.000 0.100 NA   NA
 7188121 7188122 BCG9842_B4652 BCG9842_B4651     TRUE 0.970 12.000 0.538 1.000 Y NA
 7188123 7188124 BCG9842_B4650 BCG9842_B4649     FALSE 0.501 157.000 0.778 NA   NA
 7188124 7188125 BCG9842_B4649 BCG9842_B4648     TRUE 0.760 66.000 0.615 1.000 N NA
 7188125 7188126 BCG9842_B4648 BCG9842_B4647     FALSE 0.055 203.000 0.000 NA   NA
 7188127 7188128 BCG9842_B4646 BCG9842_B4645 glpT   TRUE 0.879 -22.000 0.021 NA   NA
 7188129 7188130 BCG9842_B4644 BCG9842_B4643     TRUE 0.844 20.000 0.351 1.000 N NA
 7188130 7188131 BCG9842_B4643 BCG9842_B4642   rbsR TRUE 0.605 138.000 0.333 1.000 N NA
 7188131 7188132 BCG9842_B4642 BCG9842_B4641 rbsR rbsK TRUE 0.805 14.000 0.109 1.000 N NA
 7188132 7188133 BCG9842_B4641 BCG9842_B4640 rbsK rbsD TRUE 0.985 -3.000 0.183 1.000 Y NA
 7188133 7188134 BCG9842_B4640 BCG9842_B4639 rbsD rbsA TRUE 0.947 19.000 0.243 1.000 Y NA
 7188134 7188135 BCG9842_B4639 BCG9842_B4638 rbsA rbsC TRUE 0.986 3.000 0.358 0.001 Y NA
 7188135 7188136 BCG9842_B4638 BCG9842_B4637 rbsC rbsB TRUE 0.969 15.000 0.847 NA Y NA
 7188136 7188137 BCG9842_B4637 BCG9842_B4636 rbsB   TRUE 0.900 35.000 0.032 NA Y NA
 7188137 7188138 BCG9842_B4636 BCG9842_B4635   inhA FALSE 0.025 383.000 0.000 1.000   NA
 7188138 7188139 BCG9842_B4635 BCG9842_B4634 inhA   FALSE 0.017 319.000 0.000 NA   NA
 7188139 7188140 BCG9842_B4634 BCG9842_B4633     TRUE 0.724 22.000 0.500 NA   NA
 7188142 7188143 BCG9842_B4631 BCG9842_B4630     FALSE 0.245 119.000 0.078 NA   NA
 7188143 7188144 BCG9842_B4630 BCG9842_B4629   plC FALSE 0.029 254.000 0.000 NA   NA
 7188144 7188145 BCG9842_B4629 BCG9842_B4628 plC sph FALSE 0.355 77.000 0.075 1.000   NA
 7188145 7188146 BCG9842_B4628 BCG9842_B4627 sph   FALSE 0.216 108.000 0.038 NA   NA
 7188146 7188147 BCG9842_B4627 BCG9842_B4626     TRUE 0.977 -12.000 0.571 NA N NA
 7188150 7188151 BCG9842_B4623 BCG9842_B4622     FALSE 0.019 342.000 0.021 NA   NA
 7188151 7188152 BCG9842_B4622 BCG9842_B4621     TRUE 0.545 137.000 0.085 1.000 N NA
 7188153 7188154 BCG9842_B4620 BCG9842_B4619     TRUE 0.587 112.000 0.233 1.000 N NA
 7188154 7188155 BCG9842_B4619 BCG9842_B4618     TRUE 0.939 -7.000 0.500 NA   NA
 7188155 7188156 BCG9842_B4618 BCG9842_B4617     FALSE 0.433 117.000 0.438 NA   NA
 7188156 7188157 BCG9842_B4617 BCG9842_B4616     FALSE 0.217 140.000 0.167 NA   NA
 7188159 7188160 BCG9842_B4614 BCG9842_B4613   brnQ1 TRUE 0.903 -31.000 0.083 NA   NA
 7188160 7188161 BCG9842_B4613 BCG9842_B4612 brnQ1   FALSE 0.207 141.000 0.121 NA   NA
 7188162 7188163 BCG9842_B4611 BCG9842_B4610     FALSE 0.108 182.000 0.171 NA   NA
 7188164 7188165 BCG9842_B4609 BCG9842_B4608     FALSE 0.363 200.000 0.750 1.000   NA
 7188165 7188166 BCG9842_B4608 BCG9842_B4607     TRUE 0.662 5.000 0.250 NA   NA
 7188167 7188168 BCG9842_B4606 BCG9842_B4605     FALSE 0.467 15.000 0.125 NA   NA
 7188168 7188169 BCG9842_B4605 BCG9842_B4604     FALSE 0.220 90.000 0.062 NA   NA
 7188169 7188170 BCG9842_B4604 BCG9842_B4603   qoxD FALSE 0.284 221.000 0.000 0.069 N NA
 7188170 7188171 BCG9842_B4603 BCG9842_B4602 qoxD qoxC TRUE 0.990 1.000 0.959 1.000 Y NA
 7188171 7188172 BCG9842_B4602 BCG9842_B4601 qoxC qoxB TRUE 0.984 14.000 0.957 0.037 Y NA
 7188172 7188173 BCG9842_B4601 BCG9842_B4600 qoxB qoxA TRUE 0.952 34.000 0.234 0.007 Y NA
 7188173 7188174 BCG9842_B4600 BCG9842_B4599 qoxA   FALSE 0.170 283.000 0.000 0.069 N NA
 7188175 7188176 BCG9842_B4598 BCG9842_B4597     TRUE 0.572 133.000 0.727 NA   NA
 7188176 7188177 BCG9842_B4597 BCG9842_B4596     TRUE 0.746 2.000 0.286 NA   NA
 7188177 7188178 BCG9842_B4596 BCG9842_B4595     TRUE 0.910 -3.000 0.500 NA   NA
 7188178 7188179 BCG9842_B4595 BCG9842_B4594   gerLA FALSE 0.454 102.000 0.353 1.000   NA
 7188179 7188180 BCG9842_B4594 BCG9842_B4593 gerLA gerLB TRUE 0.959 1.000 0.706 0.010   NA
 7188180 7188181 BCG9842_B4593 BCG9842_B4592 gerLB gerLC TRUE 0.833 8.000 0.000 0.010   NA
 7188181 7188182 BCG9842_B4592 BCG9842_B4591 gerLC   FALSE 0.443 12.000 0.000 NA   NA
 7188183 7188184 BCG9842_B4590 BCG9842_B4589     TRUE 0.986 -22.000 0.556 0.003   NA
 7188184 7188185 BCG9842_B4589 BCG9842_B4588     TRUE 0.885 -3.000 0.250 1.000   NA
 7188186 7188187 BCG9842_B4587 BCG9842_B4586     TRUE 0.856 71.000 0.206 1.000 Y NA
 7188187 7188188 BCG9842_B4586 BCG9842_B4585     TRUE 0.992 3.000 0.907 0.002 Y NA
 7188188 7188189 BCG9842_B4585 BCG9842_B4584     FALSE 0.331 137.000 0.048 1.000   NA
 7188191 7188192 BCG9842_B4582 BCG9842_B4580 rrs_2 rrl_2 FALSE 0.079 179.000 0.000 NA   NA
 7188192 7188193 BCG9842_B4580 BCG9842_B4579 rrl_2 rrf_2 FALSE 0.171 101.000 0.000 NA   NA
 7188193 7188194 BCG9842_B4579 BCG9842_B4578 rrf_2   FALSE 0.517 5.000 0.000 NA   NA
 7188194 7188195 BCG9842_B4578 BCG9842_B4577     FALSE 0.477 8.000 0.000 NA   NA
 7188195 7188196 BCG9842_B4577 BCG9842_B4576     FALSE 0.456 11.000 0.000 NA   NA
 7188196 7188197 BCG9842_B4576 BCG9842_B4575     TRUE 0.537 4.000 0.000 NA   NA
 7188197 7188198 BCG9842_B4575 BCG9842_B4574     FALSE 0.387 15.000 0.000 NA   NA
 7188198 7188199 BCG9842_B4574 BCG9842_B4573     FALSE 0.360 26.000 0.000 NA   NA
 7188199 7188200 BCG9842_B4573 BCG9842_B4572     FALSE 0.379 16.000 0.000 NA   NA
 7188200 7188201 BCG9842_B4572 BCG9842_B4571     TRUE 0.582 2.000 0.000 NA   NA
 7188201 7188202 BCG9842_B4571 BCG9842_B4570     FALSE 0.487 7.000 0.000 NA   NA
 7188202 7188203 BCG9842_B4570 BCG9842_B4569     FALSE 0.443 12.000 0.000 NA   NA
 7188203 7188204 BCG9842_B4569 BCG9842_B4568     FALSE 0.383 17.000 0.000 NA   NA
 7188204 7188205 BCG9842_B4568 BCG9842_B4567     FALSE 0.225 55.000 0.000 NA   NA
 7188205 7188206 BCG9842_B4567 BCG9842_B4566     FALSE 0.397 20.000 0.000 NA   NA
 7188206 7188207 BCG9842_B4566 BCG9842_B4565     TRUE 0.582 2.000 0.000 NA   NA
 7188207 7188208 BCG9842_B4565 BCG9842_B4564     FALSE 0.487 7.000 0.000 NA   NA
 7188208 7188209 BCG9842_B4564 BCG9842_B4563     FALSE 0.471 9.000 0.000 NA   NA
 7188209 7188210 BCG9842_B4563 BCG9842_B4562     TRUE 0.582 2.000 0.000 NA   NA
 7188210 7188211 BCG9842_B4562 BCG9842_B4561     FALSE 0.517 5.000 0.000 NA   NA
 7188211 7188212 BCG9842_B4561 BCG9842_B4560     FALSE 0.487 7.000 0.000 NA   NA
 7188212 7188213 BCG9842_B4560 BCG9842_B4559     FALSE 0.174 126.000 0.000 NA   NA
 7188213 7188214 BCG9842_B4559 BCG9842_B4558     FALSE 0.017 322.000 0.000 NA   NA
 7188214 7188215 BCG9842_B4558 BCG9842_B4557     FALSE 0.009 469.000 0.000 NA   NA
 7188215 7188216 BCG9842_B4557 BCG9842_B4556     FALSE 0.501 6.000 0.000 NA   NA
 7188216 7188217 BCG9842_B4556 BCG9842_B4554     FALSE 0.393 22.000 0.000 NA   NA
 7188218 7188219 BCG9842_B4553 BCG9842_B4552     TRUE 0.875 6.000 0.750 NA   NA
 7188220 7188221 BCG9842_B4549 BCG9842_B4548     TRUE 0.975 -31.000 0.145 1.000 N NA
 7188221 7188222 BCG9842_B4548 BCG9842_B4547     TRUE 0.993 -3.000 0.826 1.000 Y NA
 7188222 7188223 BCG9842_B4547 BCG9842_B4546     TRUE 0.989 -3.000 0.135 0.034 Y NA
 7188223 7188224 BCG9842_B4546 BCG9842_B4545   tenI TRUE 0.835 11.000 0.054 1.000 N NA
 7188224 7188225 BCG9842_B4545 BCG9842_B4544 tenI thiO TRUE 0.960 -7.000 0.194 1.000 N NA
 7188225 7188226 BCG9842_B4544 BCG9842_B4543 thiO thiS TRUE 0.804 16.000 0.239 1.000 N NA
 7188226 7188227 BCG9842_B4543 BCG9842_B4542 thiS thiG TRUE 0.970 3.000 0.054 1.000 Y NA
 7188227 7188228 BCG9842_B4542 BCG9842_B4541 thiG   TRUE 0.989 -7.000 0.012 1.000 Y NA
 7188228 7188229 BCG9842_B4541 BCG9842_B4540   thiD1 TRUE 0.942 16.000 0.195 1.000 Y NA
 7188229 7188230 BCG9842_B4540 BCG9842_B4538 thiD1   FALSE 0.016 327.000 0.000 NA   NA
 7188230 7188231 BCG9842_B4538 BCG9842_B4537     TRUE 0.673 17.000 0.429 NA   NA
 7188231 7188232 BCG9842_B4537 BCG9842_B4535     FALSE 0.009 470.000 0.000 NA   NA
 7188232 7188233 BCG9842_B4535 BCG9842_B4534   kdpA FALSE 0.302 97.000 0.286 NA   NA
 7188233 7188234 BCG9842_B4534 BCG9842_B4533 kdpA kdpB TRUE 0.974 11.000 0.035 0.001 Y NA
 7188234 7188235 BCG9842_B4533 BCG9842_B4532 kdpB kdpC TRUE 0.985 17.000 0.877 0.001 Y NA
 7188235 7188236 BCG9842_B4532 BCG9842_B4531 kdpC kdpD FALSE 0.392 66.000 0.066 1.000   NA
 7188238 7188239 BCG9842_B4529 BCG9842_B4528     TRUE 0.543 129.000 0.500 1.000   NA
 7188239 7188240 BCG9842_B4528 BCG9842_B4527     FALSE 0.356 127.000 0.357 NA   NA
 7188242 7188243 BCG9842_B4525 BCG9842_B4524     FALSE 0.453 67.000 0.438 NA   NA
 7188243 7188244 BCG9842_B4524 BCG9842_B4523     TRUE 0.577 104.000 0.727 NA   NA
 7188245 7188246 BCG9842_B4522 BCG9842_B4521     FALSE 0.232 73.000 0.148 NA   NA
 7188246 7188247 BCG9842_B4521 BCG9842_B4520     TRUE 0.968 13.000 0.073 0.005 Y NA
 7188247 7188248 BCG9842_B4520 BCG9842_B4519     FALSE 0.130 166.000 0.127 NA   NA
 7188248 7188249 BCG9842_B4519 BCG9842_B4518     FALSE 0.370 121.000 0.364 NA   NA
 7188249 7188250 BCG9842_B4518 BCG9842_B4517     TRUE 0.556 46.000 0.444 NA   NA
 7188250 7188251 BCG9842_B4517 BCG9842_B4516     TRUE 0.888 17.000 0.600 0.010   NA
 7188251 7188252 BCG9842_B4516 BCG9842_B4515     TRUE 0.979 -3.000 0.867 0.010   NA
 7188252 7188253 BCG9842_B4515 BCG9842_B4514     TRUE 0.528 126.000 0.462 1.000   NA
 7188254 7188255 BCG9842_B4513 BCG9842_B4512   spoVR FALSE 0.216 115.000 0.019 NA   NA
 7188255 7188256 BCG9842_B4512 BCG9842_B4511 spoVR   FALSE 0.207 109.000 0.014 NA   NA
 7188256 7188257 BCG9842_B4511 BCG9842_B4510     FALSE 0.024 274.000 0.000 NA   NA
 7188257 7188258 BCG9842_B4510 BCG9842_B4509     FALSE 0.236 52.000 0.000 NA   NA
 7188258 7188259 BCG9842_B4509 BCG9842_B4508     FALSE 0.324 47.000 0.136 NA   NA
 7188259 7188260 BCG9842_B4508 BCG9842_B4507     FALSE 0.068 190.000 0.000 NA   NA
 7188260 7188261 BCG9842_B4507 BCG9842_B4506     FALSE 0.215 89.000 0.127 NA   NA
 7188261 7188262 BCG9842_B4506 BCG9842_B4505     TRUE 0.587 39.000 0.286 1.000   NA
 7188262 7188263 BCG9842_B4505 BCG9842_B4504     TRUE 0.641 23.000 0.207 1.000   NA
 7188263 7188264 BCG9842_B4504 BCG9842_B4503     TRUE 0.645 38.000 0.154 NA N NA
 7188264 7188265 BCG9842_B4503 BCG9842_B4502     TRUE 0.992 -10.000 0.410 NA Y NA
 7188265 7188266 BCG9842_B4502 BCG9842_B4501     FALSE 0.257 74.000 0.211 NA   NA
 7188266 7188267 BCG9842_B4501 BCG9842_B4500     FALSE 0.409 34.000 0.184 NA   NA
 7188268 7188269 BCG9842_B4499 BCG9842_B4498     FALSE 0.492 149.000 0.667 NA   NA
 7188271 7188272 BCG9842_B4496 BCG9842_B4495     FALSE 0.050 352.000 0.000 NA N NA
 7188273 7188274 BCG9842_B4494 BCG9842_B4493     FALSE 0.348 77.000 0.149 1.000   NA
 7188274 7188275 BCG9842_B4493 BCG9842_B4492   celC1 TRUE 0.711 111.000 0.149 0.005 N NA
 7188275 7188276 BCG9842_B4492 BCG9842_B4491 celC1 celA1 TRUE 0.969 44.000 0.778 0.005 Y NA
 7188276 7188277 BCG9842_B4491 BCG9842_B4490 celA1 celB1 TRUE 0.930 84.000 0.583 0.005 Y NA
 7188277 7188278 BCG9842_B4490 BCG9842_B4489 celB1   TRUE 0.967 -24.000 0.583 NA   NA
 7188278 7188279 BCG9842_B4489 BCG9842_B4488     TRUE 0.965 -10.000 0.700 NA   NA
 7188280 7188281 BCG9842_B4487 BCG9842_B4486     FALSE 0.034 458.000 0.000 NA N NA
 7188281 7188282 BCG9842_B4486 BCG9842_B4485     TRUE 0.985 3.000 0.889 NA Y NA
 7188282 7188283 BCG9842_B4485 BCG9842_B4484     TRUE 0.979 -3.000 0.889 1.000 N NA
 7188284 7188285 BCG9842_B4483 BCG9842_B4482     FALSE 0.331 91.000 0.333 NA   NA
 7188285 7188286 BCG9842_B4482 BCG9842_B4481     TRUE 0.992 2.000 0.875 0.034 Y NA
 7188287 7188288 BCG9842_B4480 BCG9842_B4479 brnQ2 cotJC FALSE 0.193 219.000 0.000 1.000 N NA
 7188288 7188289 BCG9842_B4479 BCG9842_B4478 cotJC cotJB TRUE 0.717 13.000 0.438 NA   NA
 7188289 7188290 BCG9842_B4478 BCG9842_B4477 cotJB cotJA TRUE 0.793 9.000 0.516 NA   NA
 7188291 7188292 BCG9842_B4476 BCG9842_B4475     TRUE 0.547 15.000 0.259 NA   NA
 7188294 7188295 BCG9842_B4472 BCG9842_B4471     TRUE 0.684 12.000 0.368 NA   NA
 7188295 7188296 BCG9842_B4471 BCG9842_B4470     FALSE 0.456 99.000 0.500 NA   NA
 7188296 7188297 BCG9842_B4470 BCG9842_B4469     TRUE 0.795 21.000 0.667 NA   NA
 7188299 7188300 BCG9842_B4467 BCG9842_B4466     FALSE 0.027 262.000 0.000 NA   NA
 7188300 7188301 BCG9842_B4466 BCG9842_B4465     FALSE 0.375 80.000 0.400 NA   NA
 7188301 7188302 BCG9842_B4465 BCG9842_B4464     TRUE 0.772 13.000 0.556 NA   NA
 7188304 7188305 BCG9842_B4462 BCG9842_B4461     TRUE 0.611 125.000 0.778 NA   NA
 7188305 7188306 BCG9842_B4461 BCG9842_B4460     FALSE 0.488 30.000 0.259 NA   NA
 7188306 7188307 BCG9842_B4460 BCG9842_B4459   murQ FALSE 0.509 156.000 0.156 0.001   NA
 7188307 7188308 BCG9842_B4459 BCG9842_B4458 murQ   TRUE 0.700 25.000 0.344 1.000   NA
 7188308 7188309 BCG9842_B4458 BCG9842_B4457     TRUE 0.578 49.000 0.357 1.000   NA
 7188309 7188310 BCG9842_B4457 BCG9842_B4456     FALSE 0.178 153.000 0.113 NA   NA
 7188310 7188311 BCG9842_B4456 BCG9842_B4455     FALSE 0.327 155.000 0.429 NA   NA
 7188311 7188312 BCG9842_B4455 BCG9842_B4454     TRUE 0.875 0.000 0.500 NA   NA
 7188314 7188315 BCG9842_B4452 BCG9842_B4451     TRUE 0.547 129.000 0.027 1.000 N NA
 7188317 7188318 BCG9842_B4449 BCG9842_B4448     FALSE 0.306 53.000 0.095 NA   NA
 7188318 7188319 BCG9842_B4448 BCG9842_B4447     FALSE 0.032 246.000 0.000 NA   NA
 7188319 7188320 BCG9842_B4447 BCG9842_B4446     TRUE 0.991 3.000 0.846 0.068 Y NA
 7188320 7188321 BCG9842_B4446 BCG9842_B4445     TRUE 0.695 133.000 0.538 1.000 N NA
 7188321 7188322 BCG9842_B4445 BCG9842_B4444   blT FALSE 0.209 213.000 0.000 1.000 N NA
 7188324 7188325 BCG9842_B4442 BCG9842_B4441     TRUE 0.543 24.000 0.267 NA   NA
 7188326 7188327 BCG9842_B4440 BCG9842_B4439     FALSE 0.016 326.000 0.000 NA   NA
 7188327 7188328 BCG9842_B4439 BCG9842_B4438     TRUE 0.622 24.000 0.176 1.000   NA
 7188328 7188329 BCG9842_B4438 BCG9842_B4437     FALSE 0.237 191.000 0.160 NA N NA
 7188329 7188330 BCG9842_B4437 BCG9842_B4436     TRUE 0.598 61.000 0.320 NA N NA
 7188330 7188331 BCG9842_B4436 BCG9842_B4434   gapN FALSE 0.043 507.000 0.000 1.000 N NA
 7188331 7188332 BCG9842_B4434 BCG9842_B4433 gapN   FALSE 0.017 322.000 0.000 NA   NA
 7188333 7188334 BCG9842_B4432 BCG9842_B4431     TRUE 0.996 -3.000 0.844 0.005 Y NA
 7188334 7188335 BCG9842_B4431 BCG9842_B4430     FALSE 0.162 295.000 0.000 0.045 N NA
 7188335 7188336 BCG9842_B4430 BCG9842_B4429     TRUE 0.947 56.000 0.594 0.034 Y NA
 7188336 7188337 BCG9842_B4429 BCG9842_B4428     TRUE 0.951 29.000 0.481 1.000 Y NA
 7188340 7188341 BCG9842_B4425 BCG9842_B4424     FALSE 0.514 21.000 0.208 NA   NA
 7188342 7188343 BCG9842_B4423 BCG9842_B4422     FALSE 0.303 143.000 0.321 NA   NA
 7188343 7188344 BCG9842_B4422 BCG9842_B4421     FALSE 0.014 354.000 0.000 NA   NA
 7188344 7188345 BCG9842_B4421 BCG9842_B4420     FALSE 0.018 405.000 0.222 NA   NA
 7188345 7188346 BCG9842_B4420 BCG9842_B4419     TRUE 0.940 64.000 0.556 0.021 Y NA
 7188346 7188347 BCG9842_B4419 BCG9842_B4418     FALSE 0.014 353.000 0.000 NA   NA
 7188347 7188348 BCG9842_B4418 BCG9842_B4417     TRUE 0.723 57.000 1.000 NA   NA
 7188348 7188349 BCG9842_B4417 BCG9842_B4416     TRUE 0.814 23.000 0.750 NA   NA
 7188349 7188350 BCG9842_B4416 BCG9842_B4415     TRUE 0.768 46.000 1.000 NA   NA
 7188350 7188351 BCG9842_B4415 BCG9842_B4414     FALSE 0.455 101.000 0.500 NA   NA
 7188351 7188352 BCG9842_B4414 BCG9842_B4413     FALSE 0.011 420.000 0.000 NA   NA
 7188353 7188354 BCG9842_B4412 BCG9842_B4411     TRUE 0.743 22.000 0.545 NA   NA
 7188355 7188356 BCG9842_B4410 BCG9842_B4409 alsS alsD TRUE 0.829 17.000 0.323 1.000 N NA
 7188358 7188359 BCG9842_B4407 BCG9842_B4406     FALSE 0.011 395.000 0.000 NA   NA
 7188361 7188362 BCG9842_B4404 BCG9842_B4403     FALSE 0.182 271.000 0.000 0.082 N NA
 7188364 7188365 BCG9842_B4401 BCG9842_B4400     FALSE 0.032 335.000 0.000 1.000   NA
 7188365 7188366 BCG9842_B4400 BCG9842_B4399   csaB FALSE 0.193 144.000 0.040 NA   NA
 7188366 7188367 BCG9842_B4399 BCG9842_B4398 csaB   FALSE 0.192 143.000 0.032 NA   NA
 7188369 7188370 BCG9842_B4396 BCG9842_B4395     FALSE 0.309 107.000 0.292 NA   NA
 7188370 7188371 BCG9842_B4395 BCG9842_B4394     TRUE 0.735 15.000 0.538 NA   NA
 7188373 7188374 BCG9842_B4392 BCG9842_B4391     FALSE 0.091 309.000 0.000 1.000 N NA
 7188374 7188375 BCG9842_B4391 BCG9842_B4390     FALSE 0.477 151.000 0.318 NA N NA
 7188377 7188378 BCG9842_B4388 BCG9842_B4387     TRUE 0.742 164.000 0.109 1.000 Y NA
 7188378 7188379 BCG9842_B4387 BCG9842_B4386     TRUE 0.580 203.000 0.000 1.000 Y NA
 7188379 7188380 BCG9842_B4386 BCG9842_B4385     TRUE 0.953 56.000 0.688 0.033 Y NA
 7188380 7188381 BCG9842_B4385 BCG9842_B4384     TRUE 0.987 7.000 0.786 0.033 Y NA
 7188381 7188382 BCG9842_B4384 BCG9842_B4383     TRUE 0.941 27.000 0.286 1.000 Y NA
 7188382 7188383 BCG9842_B4383 BCG9842_B4382     TRUE 0.996 -7.000 0.436 0.002 Y NA
 7188383 7188384 BCG9842_B4382 BCG9842_B4381     FALSE 0.037 610.000 0.000 1.000 N NA
 7188384 7188385 BCG9842_B4381 BCG9842_B4380     FALSE 0.034 326.000 0.000 1.000   NA
 7188385 7188386 BCG9842_B4380 BCG9842_B4379     TRUE 0.846 5.000 0.600 NA   NA
 7188386 7188387 BCG9842_B4379 BCG9842_B4378     FALSE 0.201 147.000 0.075 NA   NA
 7188389 7188390 BCG9842_B4376 BCG9842_B4375     FALSE 0.030 252.000 0.000 NA   NA
 7188390 7188391 BCG9842_B4375 BCG9842_B4374   purB_1 FALSE 0.009 463.000 0.000 NA   NA
 7188393 7188394 BCG9842_B4372 BCG9842_B4371     FALSE 0.169 293.000 0.000 0.029 N NA
 7188394 7188395 BCG9842_B4371 BCG9842_B4370     FALSE 0.487 7.000 0.000 NA   NA
 7188395 7188396 BCG9842_B4370 BCG9842_B4369     FALSE 0.346 28.000 0.000 NA   NA
 7188396 7188397 BCG9842_B4369 BCG9842_B4368     FALSE 0.171 101.000 0.000 NA   NA
 7188397 7188398 BCG9842_B4368 BCG9842_B4367     FALSE 0.206 61.000 0.000 NA   NA
 7188400 7188401 BCG9842_B4365 BCG9842_B4364     FALSE 0.169 78.000 0.000 NA   NA
 7188401 7188402 BCG9842_B4364 BCG9842_B4363     TRUE 0.686 193.000 0.500 NA Y NA
 7188402 7188403 BCG9842_B4363 BCG9842_B4362     FALSE 0.049 211.000 0.000 NA   NA
 7188403 7188404 BCG9842_B4362 BCG9842_B4361     FALSE 0.103 163.000 0.000 NA   NA
 7188404 7188405 BCG9842_B4361 BCG9842_B4360     TRUE 0.615 41.000 0.500 NA   NA
 7188405 7188406 BCG9842_B4360 BCG9842_B4359     TRUE 0.713 -3.000 0.000 NA   NA
 7188406 7188407 BCG9842_B4359 BCG9842_B4358     FALSE 0.447 25.000 0.143 NA   NA
 7188407 7188408 BCG9842_B4358 BCG9842_B4357     TRUE 0.662 19.000 0.400 NA   NA
 7188408 7188409 BCG9842_B4357 BCG9842_B4356     FALSE 0.042 222.000 0.000 NA   NA
 7188409 7188410 BCG9842_B4356 BCG9842_B4355     FALSE 0.346 28.000 0.000 NA   NA
 7188412 7188413 BCG9842_B4353 BCG9842_B4352     FALSE 0.011 413.000 0.000 NA   NA
 7188413 7188414 BCG9842_B4352 BCG9842_B4351     FALSE 0.310 74.000 0.286 NA   NA
 7188414 7188415 BCG9842_B4351 BCG9842_B4350     FALSE 0.170 105.000 0.000 NA   NA
 7188415 7188416 BCG9842_B4350 BCG9842_B4349     FALSE 0.393 22.000 0.000 NA   NA
 7188417 7188418 BCG9842_B4348 BCG9842_B4347     FALSE 0.129 192.000 0.000 1.000   NA
 7188419 7188420 BCG9842_B4346 BCG9842_B4345     TRUE 0.975 20.000 0.833 1.000 Y NA
 7188420 7188421 BCG9842_B4345 BCG9842_B4344     TRUE 0.947 -3.000 0.611 1.000   NA
 7188421 7188422 BCG9842_B4344 BCG9842_B4343     FALSE 0.228 126.000 0.118 NA   NA
 7188422 7188423 BCG9842_B4343 BCG9842_B4342     FALSE 0.347 38.000 0.018 NA   NA
 7188423 7188424 BCG9842_B4342 BCG9842_B4341     FALSE 0.024 394.000 0.000 1.000   NA
 7188424 7188425 BCG9842_B4341 BCG9842_B4340     FALSE 0.312 34.000 0.000 NA   NA
 7188425 7188426 BCG9842_B4340 BCG9842_B4338     FALSE 0.006 995.000 0.000 NA   NA
 7188426 7188427 BCG9842_B4338 BCG9842_B4337     TRUE 0.990 -3.000 0.000 0.002 Y NA
 7188427 7188428 BCG9842_B4337 BCG9842_B4336     FALSE 0.164 88.000 0.000 NA   NA
 7188428 7188429 BCG9842_B4336 BCG9842_B4335     FALSE 0.168 93.000 0.000 NA   NA
 7188429 7188430 BCG9842_B4335 BCG9842_B4334     FALSE 0.244 72.000 0.074 NA   NA
 7188430 7188431 BCG9842_B4334 BCG9842_B4333     FALSE 0.028 257.000 0.000 NA   NA
 7188433 7188434 BCG9842_B4331 BCG9842_B4330   dnaB_2 TRUE 0.929 -3.000 0.041 0.049   NA
 7188434 7188435 BCG9842_B4330 BCG9842_B4329 dnaB_2   FALSE 0.180 116.000 0.000 NA   NA
 7188443 7188444 BCG9842_B4321 BCG9842_B4320     FALSE 0.220 133.000 0.061 NA   NA
 7188446 7188447 BCG9842_B4318 BCG9842_B4317     FALSE 0.372 57.000 0.000 1.000   NA
 7188447 7188448 BCG9842_B4317 BCG9842_B4316     FALSE 0.016 328.000 0.000 NA   NA
 7188449 7188450 BCG9842_B4315 BCG9842_B4314     FALSE 0.007 678.000 0.000 NA   NA
 7188451 7188452 BCG9842_B4313 BCG9842_B4312     FALSE 0.035 237.000 0.000 NA   NA
 7188456 7188457 BCG9842_B4308 BCG9842_B4307     FALSE 0.238 117.000 0.109 NA   NA
 7188458 7188459 BCG9842_B4306 BCG9842_B4305     FALSE 0.179 121.000 0.000 NA   NA
 7188460 7188461 BCG9842_B4304 BCG9842_B4303     FALSE 0.317 120.000 0.286 NA   NA
 7188461 7188462 BCG9842_B4303 BCG9842_B4302   pssA TRUE 0.680 44.000 0.011 1.000 N NA
 7188462 7188463 BCG9842_B4302 BCG9842_B4301 pssA   FALSE 0.344 115.000 0.013 1.000   NA
 7188464 7188465 BCG9842_B4300 BCG9842_B4299     FALSE 0.117 158.000 0.000 NA   NA
 7188465 7188466 BCG9842_B4299 BCG9842_B4298     FALSE 0.097 281.000 0.214 NA N NA
 7188468 7188469 BCG9842_B4296 BCG9842_B4295     TRUE 0.896 20.000 0.625 1.000 N NA
 7188470 7188471 BCG9842_B4294 BCG9842_B4293     FALSE 0.007 606.000 0.000 NA   NA
 7188471 7188472 BCG9842_B4293 BCG9842_B4292     FALSE 0.036 234.000 0.000 NA   NA
 7188472 7188473 BCG9842_B4292 BCG9842_B4291     FALSE 0.008 508.000 0.000 NA   NA
 7188477 7188478 BCG9842_B4287 BCG9842_B4286     FALSE 0.007 730.000 0.000 NA   NA
 7188478 7188479 BCG9842_B4286 BCG9842_B4285     FALSE 0.032 243.000 0.000 NA   NA
 7188479 7188480 BCG9842_B4285 BCG9842_B4284     FALSE 0.279 126.000 0.250 NA   NA
 7188480 7188481 BCG9842_B4284 BCG9842_B4283     FALSE 0.176 155.000 0.086 NA   NA
 7188481 7188482 BCG9842_B4283 BCG9842_B4282     TRUE 0.722 14.000 0.486 NA   NA
 7188482 7188483 BCG9842_B4282 BCG9842_B4281     FALSE 0.166 134.000 0.000 NA   NA
 7188484 7188485 BCG9842_B4280 BCG9842_B4279     TRUE 0.693 4.000 0.265 NA   NA
 7188488 7188489 BCG9842_B4276 BCG9842_B4275     TRUE 0.729 51.000 0.875 NA   NA
 7188489 7188490 BCG9842_B4275 BCG9842_B4274     FALSE 0.458 76.000 0.500 NA   NA
 7188492 7188493 BCG9842_B4272 BCG9842_B4271 rsbV rsbW TRUE 0.980 7.000 0.714 1.000 Y NA
 7188493 7188494 BCG9842_B4271 BCG9842_B4270 rsbW sigB TRUE 0.991 -34.000 0.838 1.000 N NA
 7188494 7188495 BCG9842_B4270 BCG9842_B4269 sigB   TRUE 0.574 70.000 0.038 1.000 N NA
 7188495 7188496 BCG9842_B4269 BCG9842_B4268     FALSE 0.358 173.000 0.032 1.000 N NA
 7188497 7188498 BCG9842_B4267 BCG9842_B4266     TRUE 0.941 17.000 0.169 1.000 Y NA
 7188498 7188499 BCG9842_B4266 BCG9842_B4265     FALSE 0.106 205.000 0.000 1.000   NA
 7188500 7188501 BCG9842_B4264 BCG9842_B4263     TRUE 0.687 37.000 0.600 NA   NA
 7188501 7188502 BCG9842_B4263 BCG9842_B4262     FALSE 0.349 168.000 0.600 NA   NA
 7188502 7188503 BCG9842_B4262 BCG9842_B4261     FALSE 0.465 143.000 0.571 NA   NA
 7188503 7188504 BCG9842_B4261 BCG9842_B4260     FALSE 0.010 437.000 0.000 NA   NA
 7188505 7188506 BCG9842_B4259 BCG9842_B4258     FALSE 0.334 58.000 0.250 NA   NA
 7188506 7188507 BCG9842_B4258 BCG9842_B4257     FALSE 0.460 77.000 0.029 NA N NA
 7188507 7188508 BCG9842_B4257 BCG9842_B4256     FALSE 0.506 146.000 0.029 1.000 N NA
 7188513 7188514 BCG9842_B4251 BCG9842_B4250     TRUE 0.857 -3.000 0.330 NA   NA
 7188514 7188515 BCG9842_B4250 BCG9842_B4249     FALSE 0.454 42.000 0.291 NA   NA
 7188515 7188516 BCG9842_B4249 BCG9842_B4248     FALSE 0.019 302.000 0.000 NA   NA
 7188518 7188519 BCG9842_B4246 BCG9842_B4245     FALSE 0.255 95.000 0.222 NA   NA
 7188519 7188520 BCG9842_B4245 BCG9842_B4244     FALSE 0.500 44.000 0.368 NA   NA
 7188520 7188521 BCG9842_B4244 BCG9842_B4243     FALSE 0.031 249.000 0.000 NA   NA
 7188521 7188522 BCG9842_B4243 BCG9842_B4242     TRUE 0.633 0.000 0.000 NA   NA
 7188522 7188523 BCG9842_B4242 BCG9842_B4241     FALSE 0.033 241.000 0.000 NA   NA
 7188523 7188524 BCG9842_B4241 BCG9842_B4240     FALSE 0.293 139.000 0.292 NA   NA
 7188524 7188525 BCG9842_B4240 BCG9842_B4239     FALSE 0.089 195.000 0.167 NA   NA
 7188527 7188528 BCG9842_B4237 BCG9842_B4236     FALSE 0.080 329.000 0.000 1.000 N NA
 7188528 7188529 BCG9842_B4236 BCG9842_B4235   glpP TRUE 0.842 98.000 0.083 1.000 Y NA
 7188529 7188530 BCG9842_B4235 BCG9842_B4234 glpP glpF FALSE 0.198 229.000 0.083 1.000 N NA
 7188530 7188531 BCG9842_B4234 BCG9842_B4233 glpF glpK TRUE 0.804 14.000 0.057 1.000 N NA
 7188531 7188532 BCG9842_B4233 BCG9842_B4232 glpK glpD TRUE 0.897 134.000 0.013 0.001 Y NA
 7188534 7188535 BCG9842_B4230 BCG9842_B4229   lstR TRUE 0.953 5.000 0.000 NA Y NA
 7188535 7188536 BCG9842_B4229 BCG9842_B4228 lstR   TRUE 0.772 8.000 0.000 NA N NA
 7188537 7188538 BCG9842_B4227 BCG9842_B4226   prsA FALSE 0.029 354.000 0.000 1.000   NA
 7188539 7188540 BCG9842_B4225 BCG9842_B4224     FALSE 0.015 342.000 0.000 NA   NA
 7188541 7188542 BCG9842_B4223 BCG9842_B4222 hpr   FALSE 0.028 300.000 0.063 NA   NA
 7188542 7188543 BCG9842_B4222 BCG9842_B4221     FALSE 0.103 181.000 0.137 NA   NA
 7188544 7188545 BCG9842_B4220 BCG9842_B4219 ecsA ecsB TRUE 0.951 -7.000 0.271 NA N NA
 7188545 7188546 BCG9842_B4219 BCG9842_B4218 ecsB ecsC TRUE 0.594 14.000 0.292 NA   NA
 7188546 7188547 BCG9842_B4218 BCG9842_B4217 ecsC   FALSE 0.022 289.000 0.000 NA   NA
 7188547 7188548 BCG9842_B4217 BCG9842_B4216     TRUE 0.903 3.000 0.778 NA   NA
 7188548 7188549 BCG9842_B4216 BCG9842_B4215     TRUE 0.594 80.000 0.778 NA   NA
 7188549 7188550 BCG9842_B4215 BCG9842_B4214     TRUE 0.780 20.000 0.625 NA   NA
 7188550 7188551 BCG9842_B4214 BCG9842_B4213     FALSE 0.056 202.000 0.000 NA   NA
 7188551 7188552 BCG9842_B4213 BCG9842_B4212     FALSE 0.040 225.000 0.000 NA   NA
 7188552 7188553 BCG9842_B4212 BCG9842_B4211     FALSE 0.010 452.000 0.000 NA   NA
 7188553 7188554 BCG9842_B4211 BCG9842_B4210     FALSE 0.082 325.000 0.000 1.000 N NA
 7188554 7188555 BCG9842_B4210 BCG9842_B4209     FALSE 0.009 479.000 0.000 NA   NA
 7188555 7188556 BCG9842_B4209 BCG9842_B4208     TRUE 0.778 -3.000 0.061 NA   NA
 7188556 7188557 BCG9842_B4208 BCG9842_B4207     FALSE 0.224 90.000 0.095 NA   NA
 7188557 7188558 BCG9842_B4207 BCG9842_B4206     FALSE 0.052 207.000 0.000 NA   NA
 7188558 7188559 BCG9842_B4206 BCG9842_B4205     TRUE 0.718 47.000 0.778 NA   NA
 7188561 7188562 BCG9842_B4203 BCG9842_B4202 pbpF hemE FALSE 0.339 178.000 0.020 1.000 N NA
 7188562 7188563 BCG9842_B4202 BCG9842_B4201 hemE hemH TRUE 0.942 15.000 0.131 1.000 Y NA
 7188563 7188564 BCG9842_B4201 BCG9842_B4200 hemH hemY1 TRUE 0.944 20.000 0.069 1.000 Y NA
 7188566 7188567 BCG9842_B4198 BCG9842_B4197     FALSE 0.277 127.000 0.250 NA   NA
 7188569 7188570 BCG9842_B4195 BCG9842_B4194     FALSE 0.054 204.000 0.000 NA   NA
 7188570 7188571 BCG9842_B4194 BCG9842_B4193     FALSE 0.092 215.000 0.000 1.000   NA
 7188571 7188572 BCG9842_B4193 BCG9842_B4192     FALSE 0.290 143.000 0.300 NA   NA
 7188572 7188573 BCG9842_B4192 BCG9842_B4191     TRUE 0.765 35.000 0.778 NA   NA
 7188575 7188576 BCG9842_B4189 BCG9842_B4188     FALSE 0.289 195.000 0.150 1.000 N NA
 7188578 7188579 BCG9842_B4186 BCG9842_B4185     TRUE 0.709 10.000 0.200 1.000   NA
 7188579 7188580 BCG9842_B4185 BCG9842_B4184     FALSE 0.122 172.000 0.098 NA   NA
 7188580 7188581 BCG9842_B4184 BCG9842_B4183     FALSE 0.464 162.000 0.778 NA   NA
 7188585 7188586 BCG9842_B4179 BCG9842_B4178     FALSE 0.471 9.000 0.000 NA   NA
 7188588 7188589 BCG9842_B4176 BCG9842_B4175     FALSE 0.497 147.000 0.121 0.023   NA
 7188589 7188590 BCG9842_B4175 BCG9842_B4174     FALSE 0.361 121.000 0.055 1.000   NA
 7188591 7188592 BCG9842_B4173 BCG9842_B4172     TRUE 0.822 6.000 0.556 NA   NA
 7188593 7188594 BCG9842_B4171 BCG9842_B4170     FALSE 0.363 61.000 0.294 NA   NA
 7188595 7188596 BCG9842_B4169 BCG9842_B4168     TRUE 0.972 10.000 0.533 1.000 Y NA
 7188597 7188598 BCG9842_B4167 BCG9842_B4166     TRUE 0.736 2.000 0.273 NA   NA
 7188598 7188599 BCG9842_B4166 BCG9842_B4165     TRUE 0.816 -10.000 0.000 NA   NA
 7188599 7188600 BCG9842_B4165 BCG9842_B4164     FALSE 0.159 140.000 0.000 NA   NA
 7188600 7188601 BCG9842_B4164 BCG9842_B4163     FALSE 0.013 363.000 0.000 NA   NA
 7188601 7188602 BCG9842_B4163 BCG9842_B4162     TRUE 0.650 135.000 0.022 0.100 N NA
 7188602 7188603 BCG9842_B4162 BCG9842_B4161     FALSE 0.252 187.000 0.000 0.100   NA
 7188603 7188604 BCG9842_B4161 BCG9842_B4160     FALSE 0.022 282.000 0.000 NA   NA
 7188604 7188605 BCG9842_B4160 BCG9842_B4159     FALSE 0.033 242.000 0.000 NA   NA
 7188605 7188606 BCG9842_B4159 BCG9842_B4158   aceB FALSE 0.042 221.000 0.000 NA   NA
 7188606 7188607 BCG9842_B4158 BCG9842_B4157 aceB aceA TRUE 0.940 24.000 0.084 1.000 Y NA
 7188608 7188609 BCG9842_B4156 BCG9842_B4155     FALSE 0.397 20.000 0.000 NA   NA
 7188612 7188613 BCG9842_B4152 BCG9842_B4151     FALSE 0.013 430.000 0.033 NA   NA
 7188613 7188614 BCG9842_B4151 BCG9842_B4150   sipT FALSE 0.333 57.000 0.246 NA   NA
 7188614 7188615 BCG9842_B4150 BCG9842_B4149 sipT addB TRUE 0.576 116.000 0.086 1.000 N NA
 7188615 7188616 BCG9842_B4149 BCG9842_B4148 addB addA TRUE 0.993 -3.000 0.408 0.003 Y NA
 7188616 7188617 BCG9842_B4148 BCG9842_B4147 addA   TRUE 0.794 13.000 0.035 0.048   NA
 7188618 7188619 BCG9842_B4146 BCG9842_B4145 gerPF1 gerPE FALSE 0.387 43.000 0.222 NA   NA
 7188619 7188620 BCG9842_B4145 BCG9842_B4144 gerPE gerPD TRUE 0.575 16.000 0.296 NA   NA
 7188620 7188621 BCG9842_B4144 BCG9842_B4143 gerPD gerPC TRUE 0.621 7.000 0.231 NA   NA
 7188621 7188622 BCG9842_B4143 BCG9842_B4142 gerPC gerPB TRUE 0.628 68.000 0.769 NA   NA
 7188622 7188623 BCG9842_B4142 BCG9842_B4141 gerPB gerPA TRUE 0.847 15.000 0.889 NA   NA
 7188623 7188624 BCG9842_B4141 BCG9842_B4140 gerPA   FALSE 0.313 97.000 0.296 NA   NA
 7188625 7188626 BCG9842_B4139 BCG9842_B4138     FALSE 0.164 88.000 0.000 NA   NA
 7188630 7188631 BCG9842_B4134 BCG9842_B4133 asnO1 hemH2 FALSE 0.308 186.000 0.011 1.000 N NA
 7188631 7188632 BCG9842_B4133 BCG9842_B4132 hemH2 katB TRUE 0.605 60.000 0.013 1.000 N NA
 7188634 7188635 BCG9842_B4130 BCG9842_B4129     FALSE 0.042 298.000 0.000 1.000   NA
 7188638 7188639 BCG9842_B4126 BCG9842_B4125 prsA   FALSE 0.431 130.000 0.467 NA   NA
 7188641 7188642 BCG9842_B4123 BCG9842_B4122     TRUE 0.924 1.000 0.826 NA   NA
 7188642 7188643 BCG9842_B4122 BCG9842_B4121     FALSE 0.405 106.000 0.429 NA   NA
 7188644 7188645 BCG9842_B4120 BCG9842_B4119   clpB FALSE 0.059 212.000 0.009 NA   NA
 7188647 7188648 BCG9842_B4117 BCG9842_B4116     FALSE 0.417 30.000 0.065 NA   NA
 7188648 7188649 BCG9842_B4116 BCG9842_B4115     FALSE 0.293 55.000 0.065 NA   NA
 7188649 7188650 BCG9842_B4115 BCG9842_B4114   fabH FALSE 0.037 232.000 0.000 NA   NA
 7188650 7188651 BCG9842_B4114 BCG9842_B4113 fabH fabF TRUE 0.956 32.000 0.076 0.001 Y NA
 7188651 7188652 BCG9842_B4113 BCG9842_B4112 fabF   FALSE 0.465 108.000 0.039 NA N NA
 7188652 7188653 BCG9842_B4112 BCG9842_B4111     FALSE 0.300 144.000 0.321 NA   NA
 7188654 7188655 BCG9842_B4110 BCG9842_B4109 trpS   FALSE 0.011 398.000 0.000 NA   NA
 7188656 7188657 BCG9842_B4108 BCG9842_B4107     TRUE 0.886 129.000 0.041 0.032 Y NA
 7188657 7188658 BCG9842_B4107 BCG9842_B4106     TRUE 0.990 -3.000 0.165 0.032 Y NA
 7188658 7188659 BCG9842_B4106 BCG9842_B4105     TRUE 0.971 21.000 0.706 1.000 Y NA
 7188659 7188660 BCG9842_B4105 BCG9842_B4104     TRUE 0.995 -7.000 0.375 0.002 Y NA
 7188665 7188666 BCG9842_B4099 BCG9842_B4098     FALSE 0.171 100.000 0.000 NA   NA
 7188667 7188668 BCG9842_B4097 BCG9842_B4096 mecA cls TRUE 0.550 73.000 0.314 NA N NA
 7188668 7188669 BCG9842_B4096 BCG9842_B4095 cls   FALSE 0.233 81.000 0.189 NA   NA
 7188669 7188670 BCG9842_B4095 BCG9842_B4094   pepF1 FALSE 0.477 52.000 0.398 NA   NA
 7188671 7188672 BCG9842_B4093 BCG9842_B4092     FALSE 0.038 230.000 0.000 NA   NA
 7188672 7188673 BCG9842_B4092 BCG9842_B4091     TRUE 0.705 0.000 0.138 NA   NA
 7188673 7188674 BCG9842_B4091 BCG9842_B4090     FALSE 0.211 169.000 0.063 1.000   NA
 7188675 7188676 BCG9842_B4089 BCG9842_B4088     FALSE 0.503 31.000 0.283 NA   NA
 7188676 7188677 BCG9842_B4088 BCG9842_B4087   ppnK TRUE 0.852 19.000 0.725 1.000   NA
 7188677 7188678 BCG9842_B4087 BCG9842_B4086 ppnK   TRUE 0.671 81.000 0.480 1.000 N NA
 7188679 7188680 BCG9842_B4085 BCG9842_B4084     FALSE 0.320 137.000 0.017 1.000   NA
 7188680 7188681 BCG9842_B4084 BCG9842_B4083     FALSE 0.336 77.000 0.028 1.000   NA
 7188681 7188682 BCG9842_B4083 BCG9842_B4082     FALSE 0.279 119.000 0.238 NA   NA
 7188682 7188683 BCG9842_B4082 BCG9842_B4081     TRUE 0.546 14.000 0.242 NA   NA
 7188683 7188684 BCG9842_B4081 BCG9842_B4080     FALSE 0.183 185.000 0.212 1.000   NA
 7188684 7188685 BCG9842_B4080 BCG9842_B4079     FALSE 0.314 123.000 0.000 1.000   NA
 7188686 7188687 BCG9842_B4078 BCG9842_B4077     FALSE 0.097 212.000 0.000 1.000   NA
 7188687 7188688 BCG9842_B4077 BCG9842_B4076     TRUE 0.898 -3.000 0.444 NA   NA
 7188688 7188689 BCG9842_B4076 BCG9842_B4075     TRUE 0.703 15.000 0.471 NA   NA
 7188689 7188690 BCG9842_B4075 BCG9842_B4074     TRUE 0.703 15.000 0.471 NA   NA
 7188690 7188691 BCG9842_B4074 BCG9842_B4073   rfbC TRUE 0.958 9.000 0.096 1.000 Y NA
 7188691 7188692 BCG9842_B4073 BCG9842_B4072 rfbC rfbB TRUE 0.941 16.000 0.183 1.000 Y NA
 7188692 7188693 BCG9842_B4072 BCG9842_B5712 rfbB   FALSE 0.397 21.000 0.000 NA   NA
 7188693 7188694 BCG9842_B5712 BCG9842_B4071   rfbD FALSE 0.278 42.000 0.000 NA   NA
 7188694 7188695 BCG9842_B4071 BCG9842_B4070 rfbD fabI TRUE 0.564 109.000 0.082 1.000 N NA
 7188695 7188696 BCG9842_B4070 BCG9842_B4069 fabI   FALSE 0.137 163.000 0.129 NA   NA
 7188698 7188699 BCG9842_B4067 BCG9842_B4066     FALSE 0.423 111.000 0.438 NA   NA
 7188700 7188701 BCG9842_B4065 BCG9842_B4064   cotZ2 FALSE 0.161 168.000 0.250 NA   NA
 7188701 7188702 BCG9842_B4064 BCG9842_B4063 cotZ2   TRUE 0.535 143.000 0.700 NA   NA
 7188702 7188703 BCG9842_B4063 BCG9842_B4062     FALSE 0.376 101.000 0.222 1.000   NA
 7188703 7188704 BCG9842_B4062 BCG9842_B4061     TRUE 0.800 2.000 0.213 1.000   NA
 7188704 7188705 BCG9842_B4061 BCG9842_B4060     FALSE 0.522 94.000 0.287 NA N NA
 7188706 7188707 BCG9842_B4059 BCG9842_B4058     FALSE 0.287 77.000 0.267 NA   NA
 7188707 7188708 BCG9842_B4058 BCG9842_B4057     FALSE 0.170 97.000 0.000 NA   NA
 7188709 7188710 BCG9842_B4056 BCG9842_B4055     FALSE 0.134 164.000 0.130 NA   NA
 7188711 7188712 BCG9842_B4054 BCG9842_B4053   trpE FALSE 0.013 370.000 0.000 NA   NA
 7188712 7188713 BCG9842_B4053 BCG9842_B4052 trpE   TRUE 0.992 -3.000 0.293 0.001 Y NA
 7188713 7188714 BCG9842_B4052 BCG9842_B4051   trpD TRUE 0.984 -3.000 0.053 1.000 Y NA
 7188714 7188715 BCG9842_B4051 BCG9842_B4050 trpD trpC TRUE 0.974 2.000 0.216 1.000 Y NA
 7188715 7188716 BCG9842_B4050 BCG9842_B4049 trpC trpF TRUE 0.992 -3.000 0.264 0.001 Y NA
 7188716 7188717 BCG9842_B4049 BCG9842_B4048 trpF trpB TRUE 0.993 -3.000 0.375 0.001 Y NA
 7188717 7188718 BCG9842_B4048 BCG9842_B4047 trpB trpA TRUE 0.982 4.000 0.248 0.001 Y NA
 7188718 7188719 BCG9842_B4047 BCG9842_B4046 trpA   FALSE 0.210 74.000 0.015 NA   NA
 7188719 7188720 BCG9842_B4046 BCG9842_B4045     TRUE 0.933 -9.000 0.429 NA   NA
 7188720 7188721 BCG9842_B4045 BCG9842_B4044     TRUE 0.610 5.000 0.071 NA   NA
 7188725 7188726 BCG9842_B4040 BCG9842_B4039     TRUE 0.620 20.000 0.333 NA   NA
 7188728 7188729 BCG9842_B4037 BCG9842_B4036     FALSE 0.353 100.000 0.098 1.000   NA
 7188729 7188730 BCG9842_B4036 BCG9842_B4035     FALSE 0.216 147.000 0.208 NA   NA
 7188731 7188732 BCG9842_B4034 BCG9842_B4033     TRUE 0.821 16.000 0.786 NA   NA
 7188732 7188733 BCG9842_B4033 BCG9842_B4032     TRUE 0.944 -3.000 0.733 NA   NA
 7188733 7188734 BCG9842_B4032 BCG9842_B4031   odhB FALSE 0.208 126.000 0.014 NA   NA
 7188734 7188735 BCG9842_B4031 BCG9842_B4030 odhB sucA TRUE 0.905 134.000 0.667 1.000 Y NA
 7188736 7188737 BCG9842_B4029 BCG9842_B4028     TRUE 0.915 3.000 0.875 NA   NA
 7188737 7188738 BCG9842_B4028 BCG9842_B4027     FALSE 0.438 158.000 0.667 NA   NA
 7188738 7188739 BCG9842_B4027 BCG9842_B4026     TRUE 0.541 133.000 0.667 NA   NA
 7188739 7188740 BCG9842_B4026 BCG9842_B4025     FALSE 0.010 427.000 0.000 NA   NA
 7188740 7188741 BCG9842_B4025 BCG9842_B4024     FALSE 0.007 684.000 0.000 NA   NA
 7188741 7188742 BCG9842_B4024 BCG9842_B4023     FALSE 0.319 33.000 0.000 NA   NA
 7188742 7188743 BCG9842_B4023 BCG9842_B4022     TRUE 0.915 -7.000 0.382 NA   NA
 7188744 7188745 BCG9842_B4021 BCG9842_B4020     FALSE 0.024 271.000 0.000 NA   NA
 7188745 7188746 BCG9842_B4020 BCG9842_B4019     FALSE 0.007 607.000 0.000 NA   NA
 7188746 7188747 BCG9842_B4019 BCG9842_B4018     FALSE 0.282 58.000 0.103 NA   NA
 7188748 7188749 BCG9842_B4017 BCG9842_B4016     FALSE 0.492 153.000 0.700 NA   NA
 7188749 7188750 BCG9842_B4016 BCG9842_B4015   sipW FALSE 0.325 195.000 0.320 0.034   NA
 7188750 7188751 BCG9842_B4015 BCG9842_B4014 sipW   FALSE 0.381 61.000 0.320 NA   NA
 7188751 7188752 BCG9842_B4014 BCG9842_B4013     TRUE 0.593 135.000 0.778 NA   NA
 7188752 7188753 BCG9842_B4013 BCG9842_B4012   calY FALSE 0.012 388.000 0.000 NA   NA
 7188754 7188755 BCG9842_B4011 BCG9842_B4010 sinR   TRUE 0.643 80.000 0.389 0.005   NA
 7188756 7188757 BCG9842_B4009 BCG9842_B4008     FALSE 0.203 172.000 0.069 1.000   NA
 7188757 7188758 BCG9842_B4008 BCG9842_B4007   potA FALSE 0.156 240.000 0.000 1.000 N NA
 7188758 7188759 BCG9842_B4007 BCG9842_B4006 potA potB TRUE 0.995 -3.000 0.789 0.032 Y NA
 7188759 7188760 BCG9842_B4006 BCG9842_B4005 potB potC TRUE 0.976 7.000 0.286 0.032 Y NA
 7188760 7188761 BCG9842_B4005 BCG9842_B4004 potC potD TRUE 0.941 39.000 0.067 0.032 Y NA
 7188761 7188762 BCG9842_B4004 BCG9842_B4003 potD   TRUE 0.651 60.000 0.267 1.000 N NA
 7188762 7188763 BCG9842_B4003 BCG9842_B4002     FALSE 0.454 112.000 0.333 1.000   NA
 7188763 7188764 BCG9842_B4002 BCG9842_B4001     FALSE 0.336 103.000 0.333 NA   NA
 7188764 7188765 BCG9842_B4001 BCG9842_B4000     FALSE 0.231 101.000 0.089 NA   NA
 7188765 7188766 BCG9842_B4000 BCG9842_B3999     FALSE 0.227 92.000 0.089 NA   NA
 7188767 7188768 BCG9842_B3998 BCG9842_B3997     FALSE 0.010 455.000 0.000 NA   NA
 7188768 7188769 BCG9842_B3997 BCG9842_B3996   glcD TRUE 0.987 -3.000 0.342 1.000 Y NA
 7188769 7188770 BCG9842_B3996 BCG9842_B3995 glcD   TRUE 0.599 118.000 0.247 1.000 N NA
 7188771 7188772 BCG9842_B3994 BCG9842_B3993     TRUE 0.943 -7.000 0.543 NA   NA
 7188772 7188773 BCG9842_B3993 BCG9842_B3992     TRUE 0.981 4.000 0.621 1.000 Y NA
 7188773 7188774 BCG9842_B3992 BCG9842_B3991     FALSE 0.055 416.000 0.000 1.000 N NA
 7188774 7188775 BCG9842_B3991 BCG9842_B3990     FALSE 0.402 169.000 0.395 NA N NA
 7188775 7188776 BCG9842_B3990 BCG9842_B3989     TRUE 0.970 17.000 0.947 NA Y NA
 7188776 7188777 BCG9842_B3989 BCG9842_B3988     TRUE 0.956 0.000 0.500 0.001   NA
 7188777 7188778 BCG9842_B3988 BCG9842_B3987   comC FALSE 0.346 114.000 0.022 1.000   NA
 7188778 7188779 BCG9842_B3987 BCG9842_B3986 comC   FALSE 0.439 15.000 0.011 NA   NA
 7188780 7188781 BCG9842_B3985 BCG9842_B3984     TRUE 0.580 203.000 0.000 1.000 Y NA
 7188781 7188782 BCG9842_B3984 BCG9842_B3982     FALSE 0.416 295.000 0.000 0.064 Y NA
 7188782 7188783 BCG9842_B3982 BCG9842_B3981     FALSE 0.420 115.000 0.273 1.000   NA
 7188783 7188784 BCG9842_B3981 BCG9842_B3980     TRUE 0.549 148.000 0.615 1.000   NA
 7188784 7188785 BCG9842_B3980 BCG9842_B3979     FALSE 0.521 102.000 0.615 NA   NA
 7188785 7188786 BCG9842_B3979 BCG9842_B3978     FALSE 0.429 43.000 0.273 NA   NA
 7188787 7188788 BCG9842_B3977 BCG9842_B3976   phbB FALSE 0.458 150.000 0.450 1.000   NA
 7188788 7188789 BCG9842_B3976 BCG9842_B3975 phbB phaC TRUE 0.899 83.000 0.161 0.001 Y NA
 7188789 7188790 BCG9842_B3975 BCG9842_B3974 phaC   TRUE 0.555 96.000 0.113 1.000 N NA
 7188790 7188791 BCG9842_B3974 BCG9842_B3973     TRUE 0.788 24.000 0.096 1.000 N NA
 7188793 7188794 BCG9842_B3971 BCG9842_B3970     FALSE 0.039 228.000 0.000 NA   NA
 7188794 7188795 BCG9842_B3970 BCG9842_B3969     TRUE 0.874 20.000 0.111 0.032 N NA
 7188795 7188796 BCG9842_B3969 BCG9842_B3968     TRUE 0.941 1.000 0.125 0.032 N NA
 7188796 7188797 BCG9842_B3968 BCG9842_B3967   phnX TRUE 0.634 22.000 0.079 1.000   NA
 7188797 7188798 BCG9842_B3967 BCG9842_B3966 phnX   TRUE 0.803 16.000 0.315 0.077   NA
 7188798 7188799 BCG9842_B3966 BCG9842_B3965     TRUE 0.980 -3.000 0.029 NA Y NA
 7188799 7188800 BCG9842_B3965 BCG9842_B3964     TRUE 0.620 41.000 0.029 NA N NA
 7188800 7188801 BCG9842_B3964 BCG9842_B3963     FALSE 0.288 170.000 0.500 NA   NA
 7188801 7188802 BCG9842_B3963 BCG9842_B3962     FALSE 0.427 150.000 0.556 NA   NA
 7188802 7188803 BCG9842_B3962 BCG9842_B3961     FALSE 0.023 405.000 0.000 1.000   NA
 7188803 7188804 BCG9842_B3961 BCG9842_B3960     FALSE 0.341 127.000 0.333 NA   NA
 7188808 7188809 BCG9842_B3956 BCG9842_B3955     FALSE 0.349 160.000 0.129 NA N NA
 7188809 7188810 BCG9842_B3955 BCG9842_B3954     FALSE 0.213 138.000 0.114 NA   NA
 7188810 7188811 BCG9842_B3954 BCG9842_B3953     TRUE 0.895 -19.000 0.200 NA   NA
 7188811 7188812 BCG9842_B3953 BCG9842_B3952     TRUE 0.847 -7.000 0.167 NA   NA
 7188814 7188815 BCG9842_B3949 BCG9842_B3948     TRUE 0.819 0.000 0.062 1.000   NA
 7188815 7188816 BCG9842_B3948 BCG9842_B3947     TRUE 0.965 -7.000 0.280 1.000 N NA
 7188816 7188817 BCG9842_B3947 BCG9842_B3946   queF TRUE 0.631 19.000 0.101 1.000   NA
 7188819 7188820 BCG9842_B3944 BCG9842_B3943     FALSE 0.215 89.000 0.140 NA   NA
 7188822 7188823 BCG9842_B3941 BCG9842_B3940     FALSE 0.261 100.000 0.229 NA   NA
 7188823 7188824 BCG9842_B3940 BCG9842_B3939   nrdI FALSE 0.009 478.000 0.000 NA   NA
 7188824 7188825 BCG9842_B3939 BCG9842_B3938 nrdI   TRUE 0.940 23.000 0.333 NA Y NA
 7188825 7188826 BCG9842_B3938 BCG9842_B3937   nrdF TRUE 0.891 82.000 0.000 0.001 Y NA
 7188826 7188827 BCG9842_B3937 BCG9842_B3936 nrdF   FALSE 0.201 216.000 0.000 1.000 N NA
 7188827 7188828 BCG9842_B3936 BCG9842_B3935     TRUE 0.947 -3.000 0.280 1.000 N NA
 7188828 7188829 BCG9842_B3935 BCG9842_B3934     TRUE 0.948 -3.000 0.778 NA   NA
 7188829 7188830 BCG9842_B3934 BCG9842_B3933     TRUE 0.808 15.000 0.727 NA   NA
 7188830 7188831 BCG9842_B3933 BCG9842_B3932     TRUE 0.866 0.000 0.471 NA   NA
 7188831 7188832 BCG9842_B3932 BCG9842_B3931     FALSE 0.022 320.000 0.040 NA   NA
 7188833 7188834 BCG9842_B3930 BCG9842_B3929     FALSE 0.280 101.000 0.258 NA   NA
 7188835 7188836 BCG9842_B3928 BCG9842_B3927     TRUE 0.566 11.000 0.194 NA   NA
 7188836 7188837 BCG9842_B3927 BCG9842_B3926     FALSE 0.214 86.000 0.127 NA   NA
 7188840 7188841 BCG9842_B3923 BCG9842_B3922 dltD dltC TRUE 0.867 -3.000 0.064 1.000   NA
 7188841 7188842 BCG9842_B3922 BCG9842_B3921 dltC dltB FALSE 0.399 69.000 0.387 NA   NA
 7188842 7188843 BCG9842_B3921 BCG9842_B3920 dltB dltA TRUE 0.947 -3.000 0.435 NA N NA
 7188843 7188844 BCG9842_B3920 BCG9842_B3919 dltA   TRUE 0.768 13.000 0.549 NA   NA
 7188845 7188846 BCG9842_B3918 BCG9842_B3917 amaA   FALSE 0.040 225.000 0.000 NA   NA
 7188846 7188847 BCG9842_B3917 BCG9842_B3916     TRUE 0.898 -7.000 0.316 NA   NA
 7188847 7188848 BCG9842_B3916 BCG9842_B3915     TRUE 0.653 25.000 0.421 NA   NA
 7188848 7188849 BCG9842_B3915 BCG9842_B3914     FALSE 0.075 252.000 0.357 NA   NA
 7188852 7188853 BCG9842_B3911 BCG9842_B3910     TRUE 0.789 18.000 0.667 NA   NA
 7188853 7188854 BCG9842_B3910 BCG9842_B3909     FALSE 0.206 77.000 0.018 NA   NA
 7188856 7188857 BCG9842_B3907 BCG9842_B3906     FALSE 0.239 67.000 0.033 NA   NA
 7188857 7188858 BCG9842_B3906 BCG9842_B3905     FALSE 0.174 75.000 0.000 NA   NA
 7188859 7188860 BCG9842_B3904 BCG9842_B3903     FALSE 0.510 156.000 0.778 NA   NA
 7188864 7188865 BCG9842_B3899 BCG9842_B3898     TRUE 0.576 85.000 0.750 NA   NA
 7188866 7188867 BCG9842_B3897 BCG9842_B3896     FALSE 0.235 87.000 0.195 NA   NA
 7188868 7188869 BCG9842_B3895 BCG9842_B3894 ilvE1 ilvB FALSE 0.290 318.000 0.000 1.000 Y NA
 7188869 7188870 BCG9842_B3894 BCG9842_B3893 ilvB ilvH TRUE 0.992 -3.000 0.249 0.001 Y NA
 7188870 7188871 BCG9842_B3893 BCG9842_B3892 ilvH ilvC1 TRUE 0.959 27.000 0.130 0.002 Y NA
 7188871 7188872 BCG9842_B3892 BCG9842_B3891 ilvC1 leuA TRUE 0.944 20.000 0.103 1.000 Y NA
 7188872 7188873 BCG9842_B3891 BCG9842_B3890 leuA leuB TRUE 0.900 78.000 0.041 0.001 Y NA
 7188873 7188874 BCG9842_B3890 BCG9842_B3889 leuB leuC TRUE 0.987 0.000 0.080 0.001 Y NA
 7188874 7188875 BCG9842_B3889 BCG9842_B3888 leuC leuD TRUE 0.997 -22.000 0.477 0.001 Y NA
 7188875 7188876 BCG9842_B3888 BCG9842_B3887 leuD hisZ FALSE 0.302 310.000 0.000 1.000 Y NA
 7188876 7188877 BCG9842_B3887 BCG9842_B3886 hisZ hisG TRUE 0.996 -24.000 0.239 0.004 Y NA
 7188877 7188878 BCG9842_B3886 BCG9842_B3885 hisG hisD TRUE 0.973 12.000 0.254 0.004 Y NA
 7188878 7188879 BCG9842_B3885 BCG9842_B3884 hisD hisB TRUE 0.986 0.000 0.096 0.004 Y NA
 7188879 7188880 BCG9842_B3884 BCG9842_B3883 hisB hisH TRUE 0.985 1.000 0.125 0.004 Y NA
 7188880 7188881 BCG9842_B3883 BCG9842_B3882 hisH hisA TRUE 0.996 -27.000 0.124 0.004 Y NA
 7188881 7188882 BCG9842_B3882 BCG9842_B3881 hisA hisF TRUE 0.995 -6.000 0.433 0.004 Y NA
 7188882 7188883 BCG9842_B3881 BCG9842_B3880 hisF hisI TRUE 0.993 -3.000 0.430 0.004 Y NA
 7188883 7188884 BCG9842_B3880 BCG9842_B3879 hisI hisE TRUE 0.971 12.000 0.152 0.004 Y NA
 7188884 7188885 BCG9842_B3879 BCG9842_B3878 hisE   TRUE 0.967 13.000 0.016 0.004 Y NA
 7188885 7188886 BCG9842_B3878 BCG9842_B3877     TRUE 0.615 69.000 0.750 NA   NA
 7188886 7188887 BCG9842_B3877 BCG9842_B3876     FALSE 0.204 145.000 0.096 NA   NA
 7188888 7188889 BCG9842_B3875 BCG9842_B3874     FALSE 0.298 189.000 0.011 1.000 N NA
 7188890 7188891 BCG9842_B3873 BCG9842_B3871   lysA FALSE 0.010 452.000 0.000 NA   NA
 7188891 7188892 BCG9842_B3871 BCG9842_B3869 lysA   FALSE 0.020 296.000 0.000 NA   NA
 7188892 7188893 BCG9842_B3869 BCG9842_B3868   cysH FALSE 0.196 88.000 0.011 NA   NA
 7188893 7188894 BCG9842_B3868 BCG9842_B3867 cysH sat TRUE 0.716 39.000 0.065 1.000 N NA
 7188894 7188895 BCG9842_B3867 BCG9842_B3866 sat cysC TRUE 0.971 13.000 0.101 0.001 Y NA
 7188895 7188896 BCG9842_B3866 BCG9842_B3865 cysC   TRUE 0.839 93.000 0.067 1.000 Y NA
 7188896 7188897 BCG9842_B3865 BCG9842_B3864     TRUE 0.825 11.000 0.647 NA   NA
 7188897 7188898 BCG9842_B3864 BCG9842_B3863   cysG FALSE 0.288 85.000 0.281 NA   NA
 7188898 7188899 BCG9842_B3863 BCG9842_B3862 cysG   TRUE 0.826 2.000 0.281 1.000   NA
 7188899 7188900 BCG9842_B3862 BCG9842_B3861     TRUE 0.963 -25.000 0.375 1.000   NA
 7188900 7188901 BCG9842_B3861 BCG9842_B3860     FALSE 0.022 422.000 0.000 1.000   NA
 7188902 7188903 BCG9842_B3859 BCG9842_B3858     FALSE 0.486 102.000 0.556 NA   NA
 7188904 7188905 BCG9842_B3857 BCG9842_B3856     FALSE 0.515 69.000 0.556 NA   NA
 7188905 7188906 BCG9842_B3856 BCG9842_B3854     FALSE 0.017 321.000 0.000 NA   NA
 7188906 7188907 BCG9842_B3854 BCG9842_B3853     FALSE 0.099 182.000 0.046 NA   NA
 7188907 7188908 BCG9842_B3853 BCG9842_B3852     TRUE 0.593 48.000 0.514 NA   NA
 7188908 7188909 BCG9842_B3852 BCG9842_B3851     FALSE 0.223 108.000 0.135 NA   NA
 7188909 7188910 BCG9842_B3851 BCG9842_B3850     TRUE 0.718 0.000 0.080 NA   NA
 7188910 7188911 BCG9842_B3850 BCG9842_B3849     TRUE 0.995 -3.000 0.853 0.020 Y NA
 7188911 7188912 BCG9842_B3849 BCG9842_B3848     FALSE 0.227 133.000 0.075 NA   NA
 7188913 7188914 BCG9842_B3847 BCG9842_B3846 brnQ3   FALSE 0.033 838.000 0.000 1.000 N NA
 7188917 7188918 BCG9842_B3843 BCG9842_B3842     FALSE 0.241 115.000 0.092 NA   NA
 7188918 7188919 BCG9842_B3842 BCG9842_B3841   hmp FALSE 0.146 160.000 0.049 NA   NA
 7188922 7188923 BCG9842_B3838 BCG9842_B3837     FALSE 0.363 118.000 0.136 1.000   NA
 7188923 7188924 BCG9842_B3837 BCG9842_B3836     TRUE 0.943 12.000 0.100 NA Y NA
 7188930 7188931 BCG9842_B3830 BCG9842_B3829     FALSE 0.469 122.000 0.500 NA   NA
 7188931 7188932 BCG9842_B3829 BCG9842_B3828     FALSE 0.477 108.000 0.389 1.000   NA
 7188932 7188933 BCG9842_B3828 BCG9842_B3827   deoD FALSE 0.101 307.000 0.040 1.000 N NA
 7188936 7188937 BCG9842_B3824 BCG9842_B3823     TRUE 0.682 23.000 0.435 NA   NA
 7188937 7188938 BCG9842_B3823 BCG9842_B3822     FALSE 0.228 106.000 0.101 NA   NA
 7188938 7188939 BCG9842_B3822 BCG9842_B3821     TRUE 0.568 113.000 0.101 1.000 N NA
 7188939 7188940 BCG9842_B3821 BCG9842_B3820   spmA TRUE 0.923 -7.000 0.252 1.000   NA
 7188940 7188941 BCG9842_B3820 BCG9842_B3819 spmA   TRUE 0.974 -3.000 0.655 0.002   NA
 7188941 7188942 BCG9842_B3819 BCG9842_B3818   rluB FALSE 0.054 290.000 0.063 1.000   NA
 7188942 7188943 BCG9842_B3818 BCG9842_B3817 rluB resA TRUE 0.559 107.000 0.069 1.000 N NA
 7188943 7188944 BCG9842_B3817 BCG9842_B3816 resA resB TRUE 0.840 122.000 0.306 NA Y NA
 7188944 7188945 BCG9842_B3816 BCG9842_B3815 resB resC TRUE 0.936 15.000 0.278 NA Y NA
 7188945 7188946 BCG9842_B3815 BCG9842_B3814 resC resD FALSE 0.109 303.000 0.178 1.000 N NA
 7188946 7188947 BCG9842_B3814 BCG9842_B3813 resD resE TRUE 0.978 0.000 0.111 1.000 Y NA
 7188947 7188948 BCG9842_B3813 BCG9842_B3812 resE   FALSE 0.498 137.000 0.108 0.096   NA
 7188948 7188949 BCG9842_B3812 BCG9842_B3811     FALSE 0.339 85.000 0.108 1.000   NA
 7188953 7188954 BCG9842_B3806 BCG9842_B3805   recQ1 TRUE 0.864 -10.000 0.103 NA   NA
 7188954 7188955 BCG9842_B3805 BCG9842_B3804 recQ1   TRUE 0.728 0.000 0.192 NA   NA
 7188955 7188956 BCG9842_B3804 BCG9842_B3803     TRUE 0.598 23.000 0.320 NA   NA
 7188956 7188957 BCG9842_B3803 BCG9842_B3802     FALSE 0.413 68.000 0.233 1.000   NA
 7188957 7188958 BCG9842_B3802 BCG9842_B3801     TRUE 0.896 0.000 0.433 1.000   NA
 7188958 7188959 BCG9842_B3801 BCG9842_B3800     TRUE 0.585 78.000 0.417 NA N NA
 7188959 7188960 BCG9842_B3800 BCG9842_B3799   gudB FALSE 0.078 312.000 0.222 NA N NA
 7188960 7188961 BCG9842_B3799 BCG9842_B3798 gudB   FALSE 0.255 81.000 0.233 NA   NA
 7188961 7188962 BCG9842_B3798 BCG9842_B3797     TRUE 0.562 94.000 0.700 NA   NA
 7188962 7188963 BCG9842_B3797 BCG9842_B3796     TRUE 0.570 80.000 0.727 NA   NA
 7188963 7188964 BCG9842_B3796 BCG9842_B3795     FALSE 0.346 109.000 0.044 1.000   NA
 7188966 7188967 BCG9842_B3793 BCG9842_B3792   cmk FALSE 0.043 218.000 0.000 NA   NA
 7188967 7188968 BCG9842_B3792 BCG9842_B3791 cmk rpsA FALSE 0.086 333.000 0.047 1.000 N NA
 7188968 7188969 BCG9842_B3791 BCG9842_B3790 rpsA   TRUE 0.817 13.000 0.061 1.000 N NA
 7188971 7188972 BCG9842_B3788 BCG9842_B3787     TRUE 0.946 -7.000 0.567 NA   NA
 7188972 7188973 BCG9842_B3787 BCG9842_B3786     TRUE 0.931 -3.000 0.633 NA   NA
 7188973 7188974 BCG9842_B3786 BCG9842_B3785   engA FALSE 0.210 125.000 0.014 NA   NA
 7188974 7188975 BCG9842_B3785 BCG9842_B3784 engA gpsA TRUE 0.632 19.000 0.068 1.000   NA
 7188975 7188976 BCG9842_B3784 BCG9842_B3783 gpsA   FALSE 0.226 116.000 0.039 NA   NA
 7188976 7188977 BCG9842_B3783 BCG9842_B3782     FALSE 0.025 268.000 0.000 NA   NA
 7188977 7188978 BCG9842_B3782 BCG9842_B3781     TRUE 0.644 64.000 0.771 NA   NA
 7188978 7188979 BCG9842_B3781 BCG9842_B3780   spoIVA FALSE 0.047 243.000 0.081 NA   NA
 7188979 7188980 BCG9842_B3780 BCG9842_B3779 spoIVA hup1 FALSE 0.020 300.000 0.000 NA   NA
 7188980 7188981 BCG9842_B3779 BCG9842_B3778 hup1 folE TRUE 0.572 121.000 0.154 1.000 N NA
 7188981 7188982 BCG9842_B3778 BCG9842_B3777 folE   FALSE 0.094 229.000 0.114 1.000   NA
 7188982 7188983 BCG9842_B3777 BCG9842_B3776   ubiE TRUE 0.781 39.000 0.708 1.000   NA
 7188983 7188984 BCG9842_B3776 BCG9842_B3775 ubiE hepT TRUE 0.947 32.000 0.476 1.000 Y NA
 7188984 7188985 BCG9842_B3775 BCG9842_B3774 hepT ndk TRUE 0.562 125.000 0.054 1.000 N NA
 7188985 7188986 BCG9842_B3774 BCG9842_B3773 ndk aroC1 FALSE 0.131 265.000 0.002 1.000 N NA
 7188986 7188987 BCG9842_B3773 BCG9842_B3772 aroC1 aroB TRUE 0.987 0.000 0.110 0.002 Y NA
 7188987 7188988 BCG9842_B3772 BCG9842_B3771 aroB hisC1 TRUE 0.832 133.000 0.009 1.000 Y NA
 7188988 7188989 BCG9842_B3771 BCG9842_B3770 hisC1   FALSE 0.019 481.000 0.000 1.000   NA
 7188989 7188990 BCG9842_B3770 BCG9842_B3769     TRUE 0.634 17.000 0.375 NA   NA
 7188990 7188991 BCG9842_B3769 BCG9842_B3768     FALSE 0.430 153.000 0.583 NA   NA
 7188991 7188992 BCG9842_B3768 BCG9842_B3767   qcrA FALSE 0.190 210.000 0.540 NA   NA
 7188992 7188993 BCG9842_B3767 BCG9842_B3766 qcrA qcrB TRUE 0.934 1.000 0.447 0.033   NA
 7188993 7188994 BCG9842_B3766 BCG9842_B3765 qcrB qcrC TRUE 0.676 44.000 0.095 0.033   NA
 7188994 7188995 BCG9842_B3765 BCG9842_B3764 qcrC   FALSE 0.220 137.000 0.069 NA   NA
 7188995 7188996 BCG9842_B3764 BCG9842_B3763     FALSE 0.446 26.000 0.104 NA   NA
 7188996 7188997 BCG9842_B3763 BCG9842_B3762     FALSE 0.227 107.000 0.104 NA   NA
 7188997 7188998 BCG9842_B3762 BCG9842_B3761     FALSE 0.219 105.000 0.050 NA   NA
 7188998 7188999 BCG9842_B3761 BCG9842_B3760     FALSE 0.206 103.000 0.020 NA   NA
 7189001 7189002 BCG9842_B3758 BCG9842_B3757   dapB TRUE 0.700 0.000 0.044 NA   NA
 7189002 7189003 BCG9842_B3757 BCG9842_B3756 dapB mgsA TRUE 0.866 15.000 0.044 0.038 N NA
 7189003 7189004 BCG9842_B3756 BCG9842_B3755 mgsA   TRUE 0.539 12.000 0.081 NA   NA
 7189004 7189005 BCG9842_B3755 BCG9842_B3754     TRUE 0.801 -3.000 0.210 NA   NA
 7189005 7189006 BCG9842_B3754 BCG9842_B3753     TRUE 0.967 -13.000 0.126 1.000 N NA
 7189006 7189007 BCG9842_B3753 BCG9842_B3752   birA TRUE 0.968 -15.000 0.134 1.000 N NA
 7189009 7189010 BCG9842_B3750 BCG9842_B3749 panB panC TRUE 0.990 0.000 0.395 0.001 Y NA
 7189010 7189011 BCG9842_B3749 BCG9842_B3748 panC panD TRUE 0.958 13.000 0.342 1.000 Y NA
 7189011 7189012 BCG9842_B3748 BCG9842_B3747 panD   TRUE 0.549 132.000 0.053 1.000 N NA
 7189012 7189013 BCG9842_B3747 BCG9842_B3746     FALSE 0.041 251.000 0.056 NA   NA
 7189013 7189014 BCG9842_B3746 BCG9842_B3745     TRUE 0.662 8.000 0.289 NA   NA
 7189014 7189015 BCG9842_B3745 BCG9842_B3744   aspB TRUE 0.730 19.000 0.367 1.000   NA
 7189015 7189016 BCG9842_B3744 BCG9842_B3743 aspB dnaD FALSE 0.490 121.000 0.072 NA N NA
 7189016 7189017 BCG9842_B3743 BCG9842_B3742 dnaD nth TRUE 0.927 16.000 0.075 NA Y NA
 7189017 7189018 BCG9842_B3742 BCG9842_B3741 nth   TRUE 0.604 4.000 0.034 NA   NA
 7189018 7189019 BCG9842_B3741 BCG9842_B3740     FALSE 0.171 99.000 0.000 NA   NA
 7189020 7189021 BCG9842_B3739 BCG9842_B3738   recU FALSE 0.387 66.000 0.056 1.000   NA
 7189024 7189025 BCG9842_B3735 BCG9842_B3734     FALSE 0.461 16.000 0.148 NA   NA
 7189027 7189028 BCG9842_B3732 BCG9842_B3731     FALSE 0.124 156.000 0.000 NA   NA
 7189028 7189029 BCG9842_B3731 BCG9842_B3730     FALSE 0.290 57.000 0.074 NA   NA
 7189029 7189030 BCG9842_B3730 BCG9842_B3729     FALSE 0.499 98.000 0.579 NA   NA
 7189030 7189031 BCG9842_B3729 BCG9842_B3728     FALSE 0.164 85.000 0.000 NA   NA
 7189031 7189032 BCG9842_B3728 BCG9842_B3727     FALSE 0.081 178.000 0.000 NA   NA
 7189032 7189033 BCG9842_B3727 BCG9842_B3726     FALSE 0.242 62.000 0.014 NA   NA
 7189033 7189034 BCG9842_B3726 BCG9842_B3725     FALSE 0.257 140.000 0.250 NA   NA
 7189034 7189035 BCG9842_B3725 BCG9842_B3724     TRUE 0.555 101.000 0.118 1.000 N NA
 7189035 7189036 BCG9842_B3724 BCG9842_B3723     TRUE 0.667 47.000 0.014 1.000 N NA
 7189038 7189039 BCG9842_B3721 BCG9842_B3719 maP2 xpt FALSE 0.082 324.000 0.000 1.000 N NA
 7189039 7189040 BCG9842_B3719 BCG9842_B3718 xpt pbuX TRUE 0.967 4.000 0.056 1.000 Y NA
 7189042 7189043 BCG9842_B3716 BCG9842_B3715     FALSE 0.089 195.000 0.089 NA   NA
 7189045 7189046 BCG9842_B3713 BCG9842_B3712     FALSE 0.415 31.000 0.069 NA   NA
 7189046 7189047 BCG9842_B3712 BCG9842_B3711     TRUE 0.631 3.000 0.046 NA   NA
 7189047 7189048 BCG9842_B3711 BCG9842_B3710     FALSE 0.181 117.000 0.000 NA   NA
 7189048 7189049 BCG9842_B3710 BCG9842_B3709     FALSE 0.393 22.000 0.000 NA   NA
 7189051 7189052 BCG9842_B3707 BCG9842_B3706     TRUE 0.893 4.000 0.765 NA   NA
 7189052 7189053 BCG9842_B3706 BCG9842_B3705     TRUE 0.949 -7.000 0.588 NA   NA
 7189053 7189054 BCG9842_B3705 BCG9842_B3703     FALSE 0.007 714.000 0.000 NA   NA
 7189054 7189055 BCG9842_B3703 BCG9842_B3702     FALSE 0.346 133.000 0.157 1.000   NA
 7189055 7189056 BCG9842_B3702 BCG9842_B3701     FALSE 0.018 357.000 0.039 NA   NA
 7189056 7189057 BCG9842_B3701 BCG9842_B3700     FALSE 0.016 329.000 0.000 NA   NA
 7189057 7189058 BCG9842_B3700 BCG9842_B3699     TRUE 0.960 1.000 0.750 1.000 N NA
 7189058 7189059 BCG9842_B3699 BCG9842_B3698     TRUE 0.975 -7.000 0.625 NA N NA
 7189059 7189060 BCG9842_B3698 BCG9842_B3697     TRUE 0.885 19.000 0.714 NA N NA
 7189060 7189061 BCG9842_B3697 BCG9842_B3696     TRUE 0.601 57.000 0.625 NA   NA
 7189061 7189062 BCG9842_B3696 BCG9842_B3695     TRUE 0.825 4.000 0.500 NA   NA
 7189062 7189063 BCG9842_B3695 BCG9842_B3694     TRUE 0.891 -25.000 0.046 NA   NA
 7189063 7189064 BCG9842_B3694 BCG9842_B3693     TRUE 0.981 -3.000 0.050 NA Y NA
 7189064 7189065 BCG9842_B3693 BCG9842_B3692     FALSE 0.213 93.000 0.041 NA   NA
 7189070 7189071 BCG9842_B3687 BCG9842_B3686   rnhA TRUE 0.635 14.000 0.133 1.000   NA
 7189071 7189072 BCG9842_B3686 BCG9842_B3685 rnhA   TRUE 0.584 70.000 0.076 1.000 N NA
 7189073 7189074 BCG9842_B3683 BCG9842_B3682     FALSE 0.199 152.000 0.200 NA   NA
 7189074 7189075 BCG9842_B3682 BCG9842_B3681     TRUE 0.818 13.000 0.680 NA   NA
 7189076 7189077 BCG9842_B3680 BCG9842_B3679   cspB1 TRUE 0.540 120.000 0.619 NA   NA
 7189077 7189078 BCG9842_B3679 BCG9842_B3678 cspB1   FALSE 0.235 111.000 0.095 NA   NA
 7189079 7189080 BCG9842_B3677 BCG9842_B3676     TRUE 0.591 15.000 0.308 NA   NA
 7189080 7189081 BCG9842_B3676 BCG9842_B3675     TRUE 0.728 20.000 0.500 NA   NA
 7189081 7189082 BCG9842_B3675 BCG9842_B3674     FALSE 0.277 79.000 0.259 NA   NA
 7189082 7189083 BCG9842_B3674 BCG9842_B3673     FALSE 0.041 224.000 0.000 NA   NA
 7189083 7189084 BCG9842_B3673 BCG9842_B3672     TRUE 0.821 3.000 0.455 NA   NA
 7189084 7189085 BCG9842_B3672 BCG9842_B3671     FALSE 0.233 189.000 0.364 1.000   NA
 7189085 7189086 BCG9842_B3671 BCG9842_B3670     FALSE 0.199 65.000 0.000 NA   NA
 7189088 7189089 BCG9842_B3668 BCG9842_B3667     FALSE 0.360 95.000 0.188 1.000   NA
 7189089 7189090 BCG9842_B3667 BCG9842_B3666     TRUE 0.534 148.000 0.250 1.000 N NA
 7189092 7189093 BCG9842_B3664 BCG9842_B3663     FALSE 0.141 149.000 0.000 NA   NA
 7189094 7189095 BCG9842_B3662 BCG9842_B3661     TRUE 0.952 39.000 0.400 0.046 Y NA
 7189096 7189097 BCG9842_B3660 BCG9842_B3659     FALSE 0.084 222.000 0.000 1.000   NA
 7189098 7189099 BCG9842_B3658 BCG9842_B3657     FALSE 0.006 965.000 0.000 NA   NA
 7189100 7189101 BCG9842_B3656 BCG9842_B3655   hfq1 TRUE 0.687 54.000 0.778 NA   NA
 7189103 7189104 BCG9842_B3653 BCG9842_B3652     TRUE 0.945 20.000 0.192 1.000 Y NA
 7189104 7189105 BCG9842_B3652 BCG9842_B3651     FALSE 0.491 151.000 0.143 1.000 N NA
 7189105 7189106 BCG9842_B3651 BCG9842_B3650     TRUE 0.889 130.000 0.154 0.019 Y NA
 7189106 7189107 BCG9842_B3650 BCG9842_B3649     TRUE 0.790 174.000 0.036 0.006 Y NA
 7189107 7189108 BCG9842_B3649 BCG9842_B3648     FALSE 0.401 30.000 0.042 NA   NA
 7189108 7189109 BCG9842_B3648 BCG9842_B3647     TRUE 0.822 28.000 0.889 NA   NA
 7189110 7189111 BCG9842_B3646 BCG9842_B3645 cheR   FALSE 0.357 40.000 0.053 NA   NA
 7189112 7189113 BCG9842_B3644 BCG9842_B3643     FALSE 0.459 16.000 0.056 NA   NA
 7189113 7189114 BCG9842_B3643 BCG9842_B3642   flgK FALSE 0.463 18.000 0.045 NA   NA
 7189114 7189115 BCG9842_B3642 BCG9842_B3641 flgK flgL TRUE 0.945 42.000 0.028 0.001 Y NA
 7189115 7189116 BCG9842_B3641 BCG9842_B3640 flgL fliD TRUE 0.949 18.000 0.292 1.000 Y NA
 7189116 7189117 BCG9842_B3640 BCG9842_B3639 fliD   TRUE 0.980 23.000 0.608 0.001 Y NA
 7189117 7189118 BCG9842_B3639 BCG9842_B3638     TRUE 0.864 -10.000 0.101 NA   NA
 7189118 7189119 BCG9842_B3638 BCG9842_B3637     FALSE 0.171 129.000 0.000 NA   NA
 7189119 7189120 BCG9842_B3637 BCG9842_B3636   flgB FALSE 0.179 115.000 0.000 NA   NA
 7189120 7189121 BCG9842_B3636 BCG9842_B3635 flgB flgC TRUE 0.984 20.000 0.804 0.002 Y NA
 7189121 7189122 BCG9842_B3635 BCG9842_B3634 flgC fliE TRUE 0.964 17.000 0.068 0.002 Y NA
 7189122 7189123 BCG9842_B3634 BCG9842_B3633 fliE fliF TRUE 0.964 23.000 0.076 0.004 Y NA
 7189123 7189124 BCG9842_B3633 BCG9842_B3632 fliF fliG TRUE 0.976 14.000 0.477 0.004 Y NA
 7189124 7189125 BCG9842_B3632 BCG9842_B3631 fliG fliH TRUE 0.859 -13.000 0.019 NA   NA
 7189125 7189126 BCG9842_B3631 BCG9842_B3630 fliH fliI TRUE 0.775 -3.000 0.129 NA   NA
 7189126 7189127 BCG9842_B3630 BCG9842_B3629 fliI   FALSE 0.238 118.000 0.061 NA   NA
 7189127 7189128 BCG9842_B3629 BCG9842_B3628     TRUE 0.880 11.000 0.889 NA   NA
 7189128 7189129 BCG9842_B3628 BCG9842_B3627   flgD TRUE 0.611 4.000 0.047 NA   NA
 7189129 7189130 BCG9842_B3627 BCG9842_B3626 flgD flgE FALSE 0.465 17.000 0.117 NA   NA
 7189130 7189131 BCG9842_B3626 BCG9842_B3625 flgE   FALSE 0.338 50.000 0.195 NA   NA
 7189131 7189132 BCG9842_B3625 BCG9842_B3624     FALSE 0.018 311.000 0.000 NA   NA
 7189132 7189133 BCG9842_B3624 BCG9842_B3623     FALSE 0.228 123.000 0.050 NA   NA
 7189133 7189134 BCG9842_B3623 BCG9842_B3622     FALSE 0.007 738.000 0.000 NA   NA
 7189134 7189135 BCG9842_B3622 BCG9842_B3621     FALSE 0.007 738.000 0.000 NA   NA
 7189136 7189137 BCG9842_B3620 BCG9842_B3619     TRUE 0.935 39.000 0.000 0.045 Y NA
 7189137 7189138 BCG9842_B3619 BCG9842_B3618     FALSE 0.042 296.000 0.000 1.000   NA
 7189139 7189140 BCG9842_B3617 BCG9842_B3616     FALSE 0.271 63.000 0.083 NA   NA
 7189140 7189141 BCG9842_B3616 BCG9842_B3615   fliM TRUE 0.824 15.000 0.079 0.001   NA
 7189141 7189142 BCG9842_B3615 BCG9842_B3614 fliM   TRUE 0.974 11.000 0.032 0.001 Y NA
 7189142 7189143 BCG9842_B3614 BCG9842_B3613     TRUE 0.689 13.000 0.400 NA   NA
 7189143 7189144 BCG9842_B3613 BCG9842_B3612   fliP TRUE 0.784 -3.000 0.073 NA   NA
 7189144 7189145 BCG9842_B3612 BCG9842_B3611 fliP fliQ TRUE 0.951 34.000 0.162 0.003 Y NA
 7189145 7189146 BCG9842_B3611 BCG9842_B3610 fliQ fliR TRUE 0.957 16.000 0.181 0.094 Y NA
 7189146 7189147 BCG9842_B3610 BCG9842_B3609 fliR flhB TRUE 0.971 11.000 0.259 0.094 Y NA
 7189147 7189148 BCG9842_B3609 BCG9842_B3608 flhB flhA TRUE 0.964 24.000 0.207 0.003 Y NA
 7189148 7189149 BCG9842_B3608 BCG9842_B3607 flhA flhF TRUE 0.969 15.000 0.440 0.094 Y NA
 7189149 7189150 BCG9842_B3607 BCG9842_B3606 flhF flgG TRUE 0.905 43.000 0.045 1.000 Y NA
 7189150 7189151 BCG9842_B3606 BCG9842_B3605 flgG   FALSE 0.304 170.000 0.080 NA N NA
 7189151 7189152 BCG9842_B3605 BCG9842_B3604     FALSE 0.160 139.000 0.000 NA   NA
 7189152 7189153 BCG9842_B3604 BCG9842_B3603     TRUE 0.765 18.000 0.600 NA   NA
 7189153 7189154 BCG9842_B3603 BCG9842_B3602     TRUE 0.942 -7.000 0.133 NA N NA
 7189154 7189155 BCG9842_B3602 BCG9842_B3601     TRUE 0.915 -9.000 0.338 NA   NA
 7189155 7189156 BCG9842_B3601 BCG9842_B3600     FALSE 0.255 63.000 0.044 NA   NA
 7189157 7189158 BCG9842_B3599 BCG9842_B3598     TRUE 0.764 3.000 0.051 1.000   NA
 7189158 7189159 BCG9842_B3598 BCG9842_B3597     FALSE 0.318 72.000 0.000 1.000   NA
 7189159 7189160 BCG9842_B3597 BCG9842_B3596     FALSE 0.088 218.000 0.000 1.000   NA
 7189160 7189161 BCG9842_B3596 BCG9842_B3595     FALSE 0.417 67.000 0.231 1.000   NA
 7189162 7189163 BCG9842_B3594 BCG9842_B3593     FALSE 0.507 114.000 0.571 NA   NA
 7189165 7189166 BCG9842_B3591 BCG9842_B3590     TRUE 0.989 -22.000 0.419 0.030 N NA
 7189166 7189167 BCG9842_B3590 BCG9842_B3589     TRUE 0.983 13.000 0.750 0.030 Y NA
 7189167 7189168 BCG9842_B3589 BCG9842_B3588     TRUE 0.925 0.000 0.278 1.000 N NA
 7189168 7189169 BCG9842_B3588 BCG9842_B3587     TRUE 0.539 21.000 0.241 NA   NA
 7189171 7189172 BCG9842_B3585 BCG9842_B3584     FALSE 0.310 66.000 0.250 NA   NA
 7189172 7189173 BCG9842_B3584 BCG9842_B3583     FALSE 0.035 238.000 0.000 NA   NA
 7189173 7189174 BCG9842_B3583 BCG9842_B3582     FALSE 0.451 51.000 0.143 1.000   NA
 7189174 7189175 BCG9842_B3582 BCG9842_B3581     FALSE 0.284 153.000 0.143 1.000   NA
 7189175 7189176 BCG9842_B3581 BCG9842_B3580     FALSE 0.351 90.000 0.368 NA   NA
 7189177 7189178 BCG9842_B3579 BCG9842_B3578     TRUE 0.905 -39.000 0.096 NA   NA
 7189178 7189179 BCG9842_B3578 BCG9842_B3577     TRUE 0.902 -16.000 0.247 NA   NA
 7189182 7189183 BCG9842_B3574 BCG9842_B3573     TRUE 0.933 -3.000 0.643 NA   NA
 7189185 7189186 BCG9842_B3571 BCG9842_B3570     FALSE 0.085 194.000 0.049 NA   NA
 7189186 7189187 BCG9842_B3570 BCG9842_B3569     FALSE 0.071 187.000 0.000 NA   NA
 7189189 7189190 BCG9842_B3567 BCG9842_B3566     TRUE 0.824 14.000 0.750 NA   NA
 7189190 7189191 BCG9842_B3566 BCG9842_B3565     FALSE 0.332 113.000 0.312 NA   NA
 7189191 7189192 BCG9842_B3565 BCG9842_B3564   nhaC2 FALSE 0.009 464.000 0.000 NA   NA
 7189193 7189194 BCG9842_B3563 BCG9842_B3562     TRUE 0.767 17.000 0.462 1.000   NA
 7189197 7189198 BCG9842_B3559 BCG9842_B3558     FALSE 0.009 491.000 0.000 NA   NA
 7189198 7189199 BCG9842_B3558 BCG9842_B3557     FALSE 0.239 98.000 0.185 NA   NA
 7189201 7189202 BCG9842_B3555 BCG9842_B3554     FALSE 0.227 111.000 0.125 NA   NA
 7189202 7189203 BCG9842_B3554 BCG9842_B3553     TRUE 0.841 5.000 0.250 NA N NA
 7189203 7189204 BCG9842_B3553 BCG9842_B3552   ccdA1 TRUE 0.859 55.000 0.171 NA Y NA
 7189204 7189205 BCG9842_B3552 BCG9842_B3551 ccdA1   TRUE 0.947 19.000 0.241 1.000 Y NA
 7189205 7189206 BCG9842_B3551 BCG9842_B3550     TRUE 0.604 18.000 0.011 1.000   NA
 7189207 7189208 BCG9842_B3549 BCG9842_B3548     TRUE 0.633 0.000 0.000 NA   NA
 7189211 7189212 BCG9842_B3545 BCG9842_B3544 dsdA   FALSE 0.173 155.000 0.065 NA   NA
 7189213 7189214 BCG9842_B3543 BCG9842_B3542     TRUE 0.779 -3.000 0.107 NA   NA
 7189214 7189215 BCG9842_B3542 BCG9842_B3541     TRUE 0.917 -7.000 0.393 NA   NA
 7189215 7189216 BCG9842_B3541 BCG9842_B3540     TRUE 0.900 -3.000 0.455 NA   NA
 7189216 7189217 BCG9842_B3540 BCG9842_B3539     FALSE 0.093 169.000 0.000 NA   NA
 7189218 7189219 BCG9842_B3538 BCG9842_B3537     TRUE 0.948 107.000 0.857 0.019 Y NA
 7189219 7189220 BCG9842_B3537 BCG9842_B3536     TRUE 0.798 137.000 0.667 0.094 N NA
 7189220 7189221 BCG9842_B3536 BCG9842_B3535     TRUE 0.675 38.000 0.250 NA N NA
 7189221 7189222 BCG9842_B3535 BCG9842_B3534     TRUE 0.838 2.000 0.000 NA N NA
 7189222 7189223 BCG9842_B3534 BCG9842_B3533     TRUE 0.586 60.000 0.000 1.000 N NA
 7189225 7189226 BCG9842_B3531 BCG9842_B3530   aspA2 TRUE 0.896 25.000 0.700 1.000 N NA
 7189226 7189227 BCG9842_B3530 BCG9842_B3529 aspA2 malS TRUE 0.719 76.000 0.583 1.000 N NA
 7189227 7189228 BCG9842_B3529 BCG9842_B3528 malS   TRUE 0.699 73.000 0.500 1.000 N NA
 7189228 7189229 BCG9842_B3528 BCG9842_B3527     TRUE 0.982 3.000 0.600 1.000 Y NA
 7189229 7189230 BCG9842_B3527 BCG9842_B3526     TRUE 0.850 118.000 0.113 1.000 Y NA
 7189232 7189233 BCG9842_B3524 BCG9842_B3523   asnA FALSE 0.009 461.000 0.000 NA   NA
 7189234 7189235 BCG9842_B3522 BCG9842_B3521   dapG1 FALSE 0.040 227.000 0.000 NA   NA
 7189236 7189237 BCG9842_B3519 BCG9842_B3518     TRUE 0.774 5.000 0.417 NA   NA
 7189237 7189238 BCG9842_B3518 BCG9842_B3517     TRUE 0.752 6.000 0.400 NA   NA
 7189242 7189243 BCG9842_B3513 BCG9842_B3512     FALSE 0.172 153.000 0.044 NA   NA
 7189243 7189244 BCG9842_B3512 BCG9842_B3511     TRUE 0.660 37.000 0.194 NA N NA
 7189244 7189245 BCG9842_B3511 BCG9842_B3510     TRUE 0.648 209.000 0.000 0.061 Y NA
 7189247 7189248 BCG9842_B3508 BCG9842_B3507   fsR FALSE 0.048 212.000 0.000 NA   NA
 7189248 7189249 BCG9842_B3507 BCG9842_B3506 fsR cysK2 TRUE 0.783 11.000 0.059 NA N NA
 7189249 7189250 BCG9842_B3506 BCG9842_B3505 cysK2   FALSE 0.339 80.000 0.143 1.000   NA
 7189250 7189251 BCG9842_B3505 BCG9842_B3504     TRUE 0.664 94.000 0.778 1.000   NA
 7189251 7189252 BCG9842_B3504 BCG9842_B3503     TRUE 0.629 24.000 0.375 NA   NA
 7189252 7189253 BCG9842_B3503 BCG9842_B3502     FALSE 0.007 763.000 0.000 NA   NA
 7189255 7189256 BCG9842_B3500 BCG9842_B3499     FALSE 0.315 155.000 0.412 NA   NA
 7189256 7189257 BCG9842_B3499 BCG9842_B3498     FALSE 0.372 111.000 0.375 NA   NA
 7189257 7189258 BCG9842_B3498 BCG9842_B3497     FALSE 0.219 143.000 0.188 NA   NA
 7189258 7189259 BCG9842_B3497 BCG9842_B3496     FALSE 0.041 224.000 0.000 NA   NA
 7189259 7189260 BCG9842_B3496 BCG9842_B3495     TRUE 0.845 11.000 0.714 NA   NA
 7189261 7189262 BCG9842_B3494 BCG9842_B3493 msrA1   TRUE 0.559 91.000 0.194 1.000 N NA
 7189263 7189264 BCG9842_B3492 BCG9842_B3491 ilvE2 ilvB2 TRUE 0.940 23.000 0.017 1.000 Y NA
 7189264 7189265 BCG9842_B3491 BCG9842_B3490 ilvB2   TRUE 0.952 -3.000 0.249 0.001   NA
 7189265 7189266 BCG9842_B3490 BCG9842_B3489   ilvC2 TRUE 0.812 15.000 0.130 0.002   NA
 7189266 7189267 BCG9842_B3489 BCG9842_B3488 ilvC2 ilvD TRUE 0.936 47.000 0.022 0.002 Y NA
 7189267 7189268 BCG9842_B3488 BCG9842_B3487 ilvD ilvA TRUE 0.922 32.000 0.012 1.000 Y NA
 7189270 7189271 BCG9842_B3485 BCG9842_B3484     FALSE 0.394 19.000 0.000 NA   NA
 7189271 7189272 BCG9842_B3484 BCG9842_B3483     FALSE 0.181 168.000 0.000 1.000   NA
 7189274 7189275 BCG9842_B3481 BCG9842_B3480     FALSE 0.065 193.000 0.000 NA   NA
 7189275 7189276 BCG9842_B3480 BCG9842_B3479     FALSE 0.508 128.000 0.588 NA   NA
 7189276 7189277 BCG9842_B3479 BCG9842_B3478     FALSE 0.070 238.000 0.000 1.000   NA
 7189277 7189278 BCG9842_B3478 BCG9842_B3477     FALSE 0.011 418.000 0.000 NA   NA
 7189278 7189279 BCG9842_B3477 BCG9842_B3476     FALSE 0.178 73.000 0.000 NA   NA
 7189279 7189280 BCG9842_B3476 BCG9842_B3475     FALSE 0.458 156.000 0.049 1.000 N NA
 7189282 7189283 BCG9842_B3473 BCG9842_B3472     TRUE 0.883 53.000 0.007 1.000 Y NA
 7189283 7189284 BCG9842_B3472 BCG9842_B3471     FALSE 0.079 228.000 0.000 1.000   NA
 7189290 7189291 BCG9842_B3464 BCG9842_B3463     FALSE 0.032 599.000 0.000 0.093   NA
 7189291 7189292 BCG9842_B3463 BCG9842_B3462     TRUE 0.770 38.000 0.286 0.003   NA
 7189292 7189293 BCG9842_B3462 BCG9842_B3461     TRUE 0.745 108.000 0.625 0.003   NA
 7189293 7189294 BCG9842_B3461 BCG9842_B3460     FALSE 0.016 582.000 0.000 1.000   NA
 7189294 7189295 BCG9842_B3460 BCG9842_B3459     FALSE 0.437 147.000 0.400 1.000   NA
 7189297 7189298 BCG9842_B3457 BCG9842_B3456     FALSE 0.399 63.000 0.062 1.000   NA
 7189299 7189300 BCG9842_B3455 BCG9842_B3454     FALSE 0.449 92.000 0.500 NA   NA
 7189301 7189302 BCG9842_B3453 BCG9842_B3452     FALSE 0.480 264.000 0.000 0.056 Y NA
 7189302 7189303 BCG9842_B3452 BCG9842_B3451   deoC FALSE 0.105 307.000 0.077 1.000 N NA
 7189303 7189304 BCG9842_B3451 BCG9842_B3450 deoC   TRUE 0.838 99.000 0.026 1.000 Y NA
 7189304 7189305 BCG9842_B3450 BCG9842_B3449   pyn1 TRUE 0.915 37.000 0.031 1.000 Y NA
 7189305 7189306 BCG9842_B3449 BCG9842_B3448 pyn1 cdd1 TRUE 0.919 34.000 0.031 1.000 Y NA
 7189306 7189307 BCG9842_B3448 BCG9842_B3447 cdd1   FALSE 0.013 365.000 0.000 NA   NA
 7189307 7189308 BCG9842_B3447 BCG9842_B3446     TRUE 0.713 -3.000 0.000 NA   NA
 7189308 7189309 BCG9842_B3446 BCG9842_B3445     FALSE 0.177 123.000 0.000 NA   NA
 7189309 7189310 BCG9842_B3445 BCG9842_B3444     FALSE 0.278 42.000 0.000 NA   NA
 7189310 7189311 BCG9842_B3444 BCG9842_B3443     FALSE 0.042 222.000 0.000 NA   NA
 7189311 7189312 BCG9842_B3443 BCG9842_B3442     TRUE 0.886 -16.000 0.182 NA   NA
 7189312 7189313 BCG9842_B3442 BCG9842_B3441     FALSE 0.027 261.000 0.000 NA   NA
 7189313 7189314 BCG9842_B3441 BCG9842_B3440     FALSE 0.165 81.000 0.000 NA   NA
 7189314 7189315 BCG9842_B3440 BCG9842_B3439     TRUE 0.744 16.000 0.571 NA   NA
 7189321 7189322 BCG9842_B3433 BCG9842_B3432 topB2   FALSE 0.081 200.000 0.065 NA   NA
 7189324 7189325 BCG9842_B3430 BCG9842_B3429     FALSE 0.159 239.000 0.000 1.000 N NA
 7189325 7189326 BCG9842_B3429 BCG9842_B3428     FALSE 0.320 84.000 0.012 1.000   NA
 7189326 7189327 BCG9842_B3428 BCG9842_B3427     FALSE 0.267 54.000 0.007 NA   NA
 7189327 7189328 BCG9842_B3427 BCG9842_B3426     FALSE 0.242 118.000 0.097 NA   NA
 7189328 7189329 BCG9842_B3426 BCG9842_B3425     TRUE 0.694 35.000 0.600 NA   NA
 7189331 7189332 BCG9842_B3423 BCG9842_B3422     TRUE 0.855 121.000 0.389 NA Y NA
 7189332 7189333 BCG9842_B3422 BCG9842_B3421     FALSE 0.489 72.000 0.158 NA N NA
 7189333 7189334 BCG9842_B3421 BCG9842_B3420     TRUE 0.606 58.000 0.123 0.032   NA
 7189334 7189335 BCG9842_B3420 BCG9842_B3419     FALSE 0.341 127.000 0.333 NA   NA
 7189335 7189336 BCG9842_B3419 BCG9842_B3418     FALSE 0.223 108.000 0.128 NA   NA
 7189336 7189337 BCG9842_B3418 BCG9842_B3417     FALSE 0.464 10.000 0.000 NA   NA
 7189337 7189338 BCG9842_B3417 BCG9842_B3416     FALSE 0.209 60.000 0.000 NA   NA
 7189340 7189341 BCG9842_B3414 BCG9842_B3413     TRUE 0.930 -10.000 0.400 NA   NA
 7189341 7189342 BCG9842_B3413 BCG9842_B3412     TRUE 0.699 1.000 0.182 NA   NA
 7189342 7189343 BCG9842_B3412 BCG9842_B3411     FALSE 0.026 263.000 0.000 NA   NA
 7189343 7189344 BCG9842_B3411 BCG9842_B3410     TRUE 0.897 91.000 0.750 NA Y NA
 7189344 7189345 BCG9842_B3410 BCG9842_B3409     TRUE 0.998 -22.000 0.708 0.023 Y NA
 7189345 7189346 BCG9842_B3409 BCG9842_B3408     TRUE 0.971 22.000 0.746 1.000 Y NA
 7189346 7189347 BCG9842_B3408 BCG9842_B3407     TRUE 0.937 107.000 0.687 0.030 Y NA
 7189351 7189352 BCG9842_B3403 BCG9842_B3402   rfbF FALSE 0.152 144.000 0.000 NA   NA
 7189352 7189353 BCG9842_B3402 BCG9842_B3401 rfbF rfbG_2 TRUE 0.996 -18.000 0.624 1.000 Y NA
 7189353 7189354 BCG9842_B3401 BCG9842_B3400 rfbG_2   TRUE 0.983 -3.000 0.000 1.000 Y NA
 7189354 7189355 BCG9842_B3400 BCG9842_B3399     TRUE 0.930 -3.000 0.000 1.000 N NA
 7189355 7189356 BCG9842_B3399 BCG9842_B3398     TRUE 0.785 0.000 0.000 1.000   NA
 7189356 7189357 BCG9842_B3398 BCG9842_B3397     TRUE 0.792 11.000 0.000 0.073   NA
 7189357 7189358 BCG9842_B3397 BCG9842_B3396     FALSE 0.443 43.000 0.000 1.000   NA
 7189358 7189359 BCG9842_B3396 BCG9842_B3395     TRUE 0.627 12.000 0.000 1.000   NA
 7189359 7189360 BCG9842_B3395 BCG9842_B3394     TRUE 0.584 5.000 0.033 NA   NA
 7189360 7189361 BCG9842_B3394 BCG9842_B3393     TRUE 0.929 2.000 1.000 NA   NA
 7189361 7189362 BCG9842_B3393 BCG9842_B3392     FALSE 0.397 21.000 0.000 NA   NA
 7189362 7189363 BCG9842_B3392 BCG9842_B3391     TRUE 0.644 31.000 0.000 NA N NA
 7189363 7189364 BCG9842_B3391 BCG9842_B3390     TRUE 0.715 14.000 0.000 NA N NA
 7189364 7189365 BCG9842_B3390 BCG9842_B3389     FALSE 0.464 10.000 0.000 NA   NA
 7189365 7189366 BCG9842_B3389 BCG9842_B3388     FALSE 0.006 869.000 0.000 NA   NA
 7189366 7189367 BCG9842_B3388 BCG9842_B3387     TRUE 0.525 121.000 0.259 NA N NA
 7189367 7189368 BCG9842_B3387 BCG9842_B3386     FALSE 0.043 219.000 0.000 NA   NA
 7189368 7189369 BCG9842_B3386 BCG9842_B3385   cydA1 FALSE 0.038 230.000 0.000 NA   NA
 7189369 7189370 BCG9842_B3385 BCG9842_B3384 cydA1 cydB1 TRUE 0.995 -13.000 0.051 0.032 Y NA
 7189370 7189371 BCG9842_B3384 BCG9842_B3383 cydB1   TRUE 0.978 0.000 0.151 1.000 Y NA
 7189371 7189372 BCG9842_B3383 BCG9842_B3382     TRUE 0.991 -3.000 0.168 0.004 Y NA
 7189372 7189373 BCG9842_B3382 BCG9842_B3381     FALSE 0.347 133.000 0.068 1.000   NA
 7189373 7189374 BCG9842_B3381 BCG9842_B3380     TRUE 0.677 108.000 0.800 1.000   NA
 7189374 7189375 BCG9842_B3380 BCG9842_B3379     TRUE 0.619 20.000 0.027 1.000   NA
 7189375 7189376 BCG9842_B3379 BCG9842_B3378     TRUE 0.907 -7.000 0.144 1.000   NA
 7189376 7189377 BCG9842_B3378 BCG9842_B3377     FALSE 0.103 185.000 0.074 NA   NA
 7189377 7189378 BCG9842_B3377 BCG9842_B3376     FALSE 0.344 91.000 0.353 NA   NA
 7189379 7189380 BCG9842_B3375 BCG9842_B3374     TRUE 0.949 -7.000 0.032 0.092   NA
 7189380 7189381 BCG9842_B3374 BCG9842_B3373     FALSE 0.186 144.000 0.021 NA   NA
 7189382 7189383 BCG9842_B3372 BCG9842_B3371     FALSE 0.064 247.000 0.000 1.000   NA
 7189387 7189388 BCG9842_B3367 BCG9842_B3366     TRUE 0.750 41.000 0.306 1.000 N NA
 7189388 7189389 BCG9842_B3366 BCG9842_B3365     TRUE 0.990 -3.000 0.538 1.000 Y NA
 7189389 7189390 BCG9842_B3365 BCG9842_B3364   fabG FALSE 0.093 228.000 0.047 1.000   NA
 7189390 7189391 BCG9842_B3364 BCG9842_B3363 fabG   FALSE 0.300 148.000 0.050 1.000   NA
 7189391 7189392 BCG9842_B3363 BCG9842_B3362     FALSE 0.011 527.000 0.040 NA   NA
 7189392 7189393 BCG9842_B3362 BCG9842_B3361     FALSE 0.234 119.000 0.136 NA   NA
 7189393 7189394 BCG9842_B3361 BCG9842_B3360     FALSE 0.465 68.000 0.467 NA   NA
 7189396 7189397 BCG9842_B3358 BCG9842_B3357   hom1 FALSE 0.013 968.000 0.000 1.000   NA
 7189397 7189398 BCG9842_B3357 BCG9842_B3356 hom1 thrC TRUE 0.989 -7.000 0.021 1.000 Y NA
 7189398 7189399 BCG9842_B3356 BCG9842_B3355 thrC thrB TRUE 0.985 -3.000 0.221 1.000 Y NA
 7189399 7189400 BCG9842_B3355 BCG9842_B3354 thrB   FALSE 0.198 134.000 0.011 NA   NA
 7189400 7189401 BCG9842_B3354 BCG9842_B3353     FALSE 0.052 208.000 0.000 NA   NA
 7189401 7189402 BCG9842_B3353 BCG9842_B3352     FALSE 0.017 315.000 0.000 NA   NA
 7189402 7189403 BCG9842_B3352 BCG9842_B3351     FALSE 0.090 170.000 0.000 NA   NA
 7189403 7189404 BCG9842_B3351 BCG9842_B3350     FALSE 0.019 302.000 0.000 NA   NA
 7189404 7189405 BCG9842_B3350 BCG9842_B3349     TRUE 0.611 15.000 0.333 NA   NA
 7189405 7189406 BCG9842_B3349 BCG9842_B3348     FALSE 0.151 160.000 0.154 NA   NA
 7189406 7189407 BCG9842_B3348 BCG9842_B3347     FALSE 0.340 93.000 0.049 1.000   NA
 7189407 7189408 BCG9842_B3347 BCG9842_B3346   asbA FALSE 0.085 318.000 0.000 1.000 N NA
 7189408 7189409 BCG9842_B3346 BCG9842_B3345 asbA asbB TRUE 0.924 61.000 0.163 0.000 Y NA
 7189409 7189410 BCG9842_B3345 BCG9842_B3344 asbB asbC TRUE 0.993 -13.000 0.310 1.000 Y NA
 7189410 7189411 BCG9842_B3344 BCG9842_B3343 asbC asbD TRUE 0.915 -3.000 0.526 NA   NA
 7189411 7189412 BCG9842_B3343 BCG9842_B3342 asbD asbE TRUE 0.749 24.000 0.583 NA   NA
 7189412 7189413 BCG9842_B3342 BCG9842_B3341 asbE asbF TRUE 0.570 38.000 0.412 NA   NA
 7189413 7189414 BCG9842_B3341 BCG9842_B3340 asbF   FALSE 0.227 125.000 0.137 NA   NA
 7189414 7189415 BCG9842_B3340 BCG9842_B3339     FALSE 0.088 236.000 0.167 1.000   NA
 7189417 7189418 BCG9842_B3337 BCG9842_B3336     TRUE 0.709 13.000 0.429 NA   NA
 7189419 7189420 BCG9842_B3335 BCG9842_B3334     TRUE 0.563 89.000 0.714 NA   NA
 7189421 7189422 BCG9842_B3333 BCG9842_B3332     FALSE 0.393 151.000 0.500 NA   NA
 7189422 7189423 BCG9842_B3332 BCG9842_B3331     FALSE 0.441 174.000 0.875 NA   NA
 7189423 7189424 BCG9842_B3331 BCG9842_B3330     TRUE 0.791 29.000 0.778 NA   NA
 7189425 7189426 BCG9842_B3329 BCG9842_B3328 nadE   FALSE 0.174 75.000 0.000 NA   NA
 7189427 7189428 BCG9842_B3327 BCG9842_B3326     TRUE 0.967 -7.000 0.800 NA   NA
 7189428 7189429 BCG9842_B3326 BCG9842_B3325     TRUE 0.898 -3.000 0.444 NA   NA
 7189429 7189430 BCG9842_B3325 BCG9842_B3324     FALSE 0.063 194.000 0.000 NA   NA
 7189430 7189431 BCG9842_B3324 BCG9842_B3323     FALSE 0.172 76.000 0.000 NA   NA
 7189431 7189432 BCG9842_B3323 BCG9842_B3322     FALSE 0.009 464.000 0.000 NA   NA
 7189432 7189433 BCG9842_B3322 BCG9842_B3321     FALSE 0.265 45.000 0.000 NA   NA
 7189433 7189434 BCG9842_B3321 BCG9842_B3320     FALSE 0.130 154.000 0.000 NA   NA
 7189434 7189435 BCG9842_B3320 BCG9842_B3319     TRUE 0.602 150.000 1.000 NA   NA
 7189435 7189436 BCG9842_B3319 BCG9842_B3318     TRUE 0.768 46.000 1.000 NA   NA
 7189436 7189437 BCG9842_B3318 BCG9842_B3317     FALSE 0.015 342.000 0.000 NA   NA
 7189437 7189438 BCG9842_B3317 BCG9842_B3316     FALSE 0.168 132.000 0.000 NA   NA
 7189438 7189439 BCG9842_B3316 BCG9842_B3315     TRUE 0.582 2.000 0.000 NA   NA
 7189439 7189440 BCG9842_B3315 BCG9842_B3314     FALSE 0.377 24.000 0.000 NA   NA
 7189440 7189441 BCG9842_B3314 BCG9842_B3313     TRUE 0.893 -22.000 0.167 NA   NA
 7189443 7189444 BCG9842_B3311 BCG9842_B3310     TRUE 0.543 93.000 0.667 NA   NA
 7189446 7189447 BCG9842_B3308 BCG9842_B3307     FALSE 0.422 116.000 0.429 NA   NA
 7189447 7189448 BCG9842_B3307 BCG9842_B3306     FALSE 0.023 276.000 0.000 NA   NA
 7189450 7189451 BCG9842_B3304 BCG9842_B3303     TRUE 0.763 48.000 0.429 1.000 N NA
 7189452 7189453 BCG9842_B3302 BCG9842_B3301     TRUE 0.645 76.000 0.889 NA   NA
 7189454 7189455 BCG9842_B3300 BCG9842_B3299   rsgA FALSE 0.052 234.000 0.091 NA   NA
 7189455 7189456 BCG9842_B3299 BCG9842_B3298 rsgA   FALSE 0.114 201.000 0.000 1.000   NA
 7189456 7189457 BCG9842_B3298 BCG9842_B3297     FALSE 0.274 197.000 0.667 NA   NA
 7189457 7189458 BCG9842_B3297 BCG9842_B3296     FALSE 0.017 322.000 0.000 NA   NA
 7189460 7189461 BCG9842_B3294 BCG9842_B3293 dps1   FALSE 0.224 103.000 0.111 NA   NA
 7189461 7189462 BCG9842_B3293 BCG9842_B3292     FALSE 0.045 215.000 0.000 NA   NA
 7189463 7189464 BCG9842_B3291 BCG9842_B3290     FALSE 0.431 105.000 0.467 NA   NA
 7189465 7189466 BCG9842_B3289 BCG9842_B3288     TRUE 0.723 85.000 0.636 1.000 N NA
 7189469 7189470 BCG9842_B3285 BCG9842_B3284     FALSE 0.288 139.000 0.000 1.000   NA
 7189471 7189472 BCG9842_B3283 BCG9842_B3282     FALSE 0.353 116.000 0.333 NA   NA
 7189474 7189475 BCG9842_B3280 BCG9842_B3279 ogt1   FALSE 0.438 26.000 0.054 NA   NA
 7189475 7189476 BCG9842_B3279 BCG9842_B3278     FALSE 0.303 85.000 0.296 NA   NA
 7189476 7189477 BCG9842_B3278 BCG9842_B3277   fosB1 TRUE 0.845 60.000 0.129 NA Y NA
 7189477 7189478 BCG9842_B3277 BCG9842_B3276 fosB1   FALSE 0.469 14.000 0.032 NA   NA
 7189478 7189479 BCG9842_B3276 BCG9842_B3275     TRUE 0.531 122.000 0.056 0.072   NA
 7189481 7189482 BCG9842_B3273 BCG9842_B3272 cotH   FALSE 0.469 105.000 0.062 NA N NA
 7189482 7189483 BCG9842_B3272 BCG9842_B3271     FALSE 0.225 105.000 0.062 NA   NA
 7189483 7189484 BCG9842_B3271 BCG9842_B3270     FALSE 0.454 103.000 0.500 NA   NA
 7189484 7189485 BCG9842_B3270 BCG9842_B3269     FALSE 0.165 184.000 0.033 1.000   NA
 7189485 7189486 BCG9842_B3269 BCG9842_B3268     FALSE 0.080 199.000 0.053 NA   NA
 7189486 7189487 BCG9842_B3268 BCG9842_B3267     TRUE 0.904 4.000 0.841 NA   NA
 7189487 7189488 BCG9842_B3267 BCG9842_B3266     FALSE 0.256 120.000 0.195 NA   NA
 7189490 7189491 BCG9842_B3264 BCG9842_B3263     TRUE 0.786 32.000 0.800 NA   NA
 7189491 7189492 BCG9842_B3263 BCG9842_B3262     FALSE 0.093 227.000 0.333 NA   NA
 7189492 7189493 BCG9842_B3262 BCG9842_B3261     FALSE 0.259 102.000 0.227 NA   NA
 7189494 7189495 BCG9842_B3260 BCG9842_B3259     TRUE 0.647 2.000 0.034 NA   NA
 7189495 7189496 BCG9842_B3259 BCG9842_B3258     FALSE 0.051 209.000 0.000 NA   NA
 7189497 7189498 BCG9842_B3257 BCG9842_B3256     FALSE 0.516 18.000 0.222 NA   NA
 7189498 7189499 BCG9842_B3256 BCG9842_B3255     FALSE 0.068 190.000 0.000 NA   NA
 7189499 7189500 BCG9842_B3255 BCG9842_B3254   brnQ4 FALSE 0.010 441.000 0.000 NA   NA
 7189500 7189501 BCG9842_B3254 BCG9842_B3253 brnQ4 csaA FALSE 0.373 67.000 0.032 1.000   NA
 7189501 7189502 BCG9842_B3253 BCG9842_B3252 csaA   FALSE 0.462 20.000 0.032 NA   NA
 7189502 7189503 BCG9842_B3252 BCG9842_B3251   spoIIP FALSE 0.007 668.000 0.000 NA   NA
 7189503 7189504 BCG9842_B3251 BCG9842_B3250 spoIIP   FALSE 0.076 257.000 0.214 1.000   NA
 7189504 7189505 BCG9842_B3250 BCG9842_B3249     TRUE 0.905 12.000 0.571 1.000 N NA
 7189505 7189506 BCG9842_B3249 BCG9842_B3248     TRUE 0.758 24.000 0.444 1.000   NA
 7189506 7189507 BCG9842_B3248 BCG9842_B3247     FALSE 0.219 182.000 0.286 1.000   NA
 7189508 7189509 BCG9842_B3246 BCG9842_B3245     TRUE 0.537 4.000 0.000 NA   NA
 7189510 7189511 BCG9842_B3244 BCG9842_B3243     TRUE 0.966 3.000 0.259 NA Y NA
 7189511 7189512 BCG9842_B3243 BCG9842_B3242     TRUE 0.621 3.000 0.028 NA   NA
 7189512 7189513 BCG9842_B3242 BCG9842_B3241     FALSE 0.244 90.000 0.211 NA   NA
 7189513 7189514 BCG9842_B3241 BCG9842_B3240     TRUE 0.799 7.000 0.368 1.000   NA
 7189514 7189515 BCG9842_B3240 BCG9842_B3239     FALSE 0.303 149.000 0.067 1.000   NA
 7189515 7189516 BCG9842_B3239 BCG9842_B3238     FALSE 0.294 194.000 0.100 1.000 N NA
 7189519 7189520 BCG9842_B3235 BCG9842_B3234     TRUE 0.912 -7.000 0.185 1.000   NA
 7189520 7189521 BCG9842_B3234 BCG9842_B3233     FALSE 0.504 24.000 0.222 NA   NA
 7189522 7189523 BCG9842_B3232 BCG9842_B3231     FALSE 0.343 181.000 0.700 NA   NA
 7189525 7189526 BCG9842_B3229 BCG9842_B3228     FALSE 0.188 177.000 0.148 1.000   NA
 7189528 7189529 BCG9842_B3226 BCG9842_B3225     TRUE 0.715 7.000 0.068 1.000   NA
 7189529 7189530 BCG9842_B3225 BCG9842_B3224     TRUE 0.864 -3.000 0.051 1.000   NA
 7189530 7189531 BCG9842_B3224 BCG9842_B3223     FALSE 0.517 13.000 0.090 NA   NA
 7189531 7189532 BCG9842_B3223 BCG9842_B3222     TRUE 0.760 4.000 0.368 NA   NA
 7189532 7189533 BCG9842_B3222 BCG9842_B3221     FALSE 0.018 310.000 0.000 NA   NA
 7189533 7189534 BCG9842_B3221 BCG9842_B3220     FALSE 0.235 127.000 0.082 NA   NA
 7189534 7189535 BCG9842_B3220 BCG9842_B3219     FALSE 0.223 98.000 0.122 NA   NA
 7189535 7189536 BCG9842_B3219 BCG9842_B3218     TRUE 0.606 5.000 0.158 NA   NA
 7189536 7189537 BCG9842_B3218 BCG9842_B3217     TRUE 0.631 74.000 0.833 NA   NA
 7189537 7189538 BCG9842_B3217 BCG9842_B3216     TRUE 0.683 40.000 0.623 NA   NA
 7189538 7189539 BCG9842_B3216 BCG9842_B3215     TRUE 0.713 -3.000 0.000 NA   NA
 7189539 7189540 BCG9842_B3215 BCG9842_B3214     FALSE 0.387 15.000 0.000 NA   NA
 7189540 7189541 BCG9842_B3214 BCG9842_B3213     FALSE 0.287 40.000 0.000 NA   NA
 7189541 7189542 BCG9842_B3213 BCG9842_B3212     TRUE 0.582 2.000 0.000 NA   NA
 7189542 7189543 BCG9842_B3212 BCG9842_B3211     FALSE 0.253 71.000 0.182 NA   NA
 7189543 7189544 BCG9842_B3211 BCG9842_B3210     TRUE 0.973 -28.000 0.667 NA   NA
 7189544 7189545 BCG9842_B3210 BCG9842_B3209     FALSE 0.034 239.000 0.000 NA   NA
 7189545 7189546 BCG9842_B3209 BCG9842_B3208     FALSE 0.307 35.000 0.000 NA   NA
 7189546 7189547 BCG9842_B3208 BCG9842_B3207     TRUE 0.741 39.000 0.750 NA   NA
 7189547 7189548 BCG9842_B3207 BCG9842_B3206     FALSE 0.009 462.000 0.000 NA   NA
 7189548 7189549 BCG9842_B3206 BCG9842_B3205     FALSE 0.383 177.000 0.750 NA   NA
 7189551 7189552 BCG9842_B3203 BCG9842_B3202     FALSE 0.167 161.000 0.216 NA   NA
 7189552 7189553 BCG9842_B3202 BCG9842_B3201     FALSE 0.337 52.000 0.216 NA   NA
 7189553 7189554 BCG9842_B3201 BCG9842_B3200     TRUE 0.665 70.000 0.889 NA   NA
 7189556 7189557 BCG9842_B3198 BCG9842_B3197   fhs TRUE 0.566 95.000 0.200 1.000 N NA
 7189557 7189558 BCG9842_B3197 BCG9842_B3196 fhs   FALSE 0.345 91.000 0.355 NA   NA
 7189558 7189559 BCG9842_B3196 BCG9842_B3195     FALSE 0.489 20.000 0.070 NA   NA
 7189559 7189560 BCG9842_B3195 BCG9842_B3194     FALSE 0.228 191.000 0.026 NA N NA
 7189560 7189561 BCG9842_B3194 BCG9842_B3193     FALSE 0.218 57.000 0.000 NA   NA
 7189562 7189563 BCG9842_B3192 BCG9842_B3191     FALSE 0.465 30.000 0.233 NA   NA
 7189564 7189565 BCG9842_B3190 BCG9842_B3189     TRUE 0.950 -3.000 0.800 NA   NA
 7189566 7189567 BCG9842_B3188 BCG9842_B3187     FALSE 0.230 111.000 0.061 NA   NA
 7189567 7189568 BCG9842_B3187 BCG9842_B3186     FALSE 0.218 86.000 0.064 NA   NA
 7189568 7189569 BCG9842_B3186 BCG9842_B3185     FALSE 0.226 96.000 0.064 NA   NA
 7189571 7189572 BCG9842_B3183 BCG9842_B3182     TRUE 0.933 -3.000 0.642 NA   NA
 7189572 7189573 BCG9842_B3182 BCG9842_B3181     TRUE 0.919 0.000 0.714 NA   NA
 7189574 7189575 BCG9842_B3180 BCG9842_B3179 narG narH TRUE 0.927 104.000 0.429 0.000 Y NA
 7189575 7189576 BCG9842_B3179 BCG9842_B3178 narH narJ TRUE 0.983 20.000 0.750 0.001 Y NA
 7189576 7189577 BCG9842_B3178 BCG9842_B3177 narJ narI TRUE 0.970 18.000 0.294 0.001 Y NA
 7189579 7189580 BCG9842_B3175 BCG9842_B3174 narA1   TRUE 0.972 18.000 0.778 1.000 Y NA
 7189580 7189581 BCG9842_B3174 BCG9842_B3173   moeA1 TRUE 0.936 43.000 0.500 1.000 Y NA
 7189581 7189582 BCG9842_B3173 BCG9842_B3172 moeA1 moaE1 TRUE 0.936 45.000 0.006 0.004