MicrobesOnline Operon Predictions for Shigella flexneri 5 str. 8401

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 2018878 2018879 SFV_0001 SFV_0002 thrA thrB TRUE 0.981 2.000 0.133 1.000 Y NA
 2018879 2018880 SFV_0002 SFV_0003 thrB thrC TRUE 0.989 1.000 0.233 1.000 Y NA
 2018880 2018881 SFV_0003 SFV_0004 thrC   FALSE 0.025 223.000 0.003 NA   NA
 2018882 1602980 SFV_0005 SFV_0006 yaaA yaaJ FALSE 0.216 70.000 0.000 NA   NA
 2018883 2018884 SFV_0007 SFV_0008 talB mog FALSE 0.242 112.000 0.042 1.000 N NA
 2018885 2018886 SFV_0009 SFV_0010 yaaH   FALSE 0.155 149.000 0.043 NA   NA
 2018886 2018887 SFV_0010 SFV_0011   yaaI TRUE 0.938 26.000 0.500 NA   NA
 2018888 2018889 SFV_0012 SFV_0013 dnaK dnaJ TRUE 0.928 89.000 0.236 0.004 Y NA
 2018889 2018890 SFV_0013 SFV_0014 dnaJ nhaA FALSE 0.003 843.000 0.022 1.000 N NA
 2018890 2018891 SFV_0014 SFV_0015 nhaA nhaR TRUE 0.732 66.000 0.292 1.000 N NA
 2018895 2018896 SFV_0019 SFV_0020 ribF ileS TRUE 0.677 91.000 0.254 1.000 N NA
 2018896 2018897 SFV_0020 SFV_0021 ileS lspA TRUE 0.836 0.000 0.045 1.000 N NA
 2018897 2018898 SFV_0021 SFV_0022 lspA slpA FALSE 0.507 87.000 0.154 1.000 N NA
 2018898 2018899 SFV_0022 SFV_0023 slpA lytB TRUE 0.988 2.000 0.626 1.000 N NA
 2018899 2018900 SFV_0023 SFV_0024 lytB yaaF FALSE 0.230 66.000 0.028 1.000 N NA
 2018900 2018901 SFV_0024 SFV_0025 yaaF dapB FALSE 0.059 167.000 0.003 1.000 N NA
 2018901 2018902 SFV_0025 SFV_0026 dapB carA FALSE 0.061 456.000 0.034 1.000 Y NA
 2018902 2018903 SFV_0026 SFV_0027 carA carB TRUE 0.989 18.000 0.345 0.001 Y NA
 2018903 2018904 SFV_0027 SFV_0028 carB caiF FALSE 0.106 157.000 0.000 NA   NA
 2018905 2018906 SFV_0029 SFV_0030 caiE caiD TRUE 0.665 -15.000 0.000 1.000   NA
 2018906 2018907 SFV_0030 SFV_0031 caiD caiC TRUE 0.939 21.000 0.000 0.023 Y NA
 2018907 2018908 SFV_0031 SFV_0032 caiC caiB TRUE 0.655 74.000 0.154 0.023 N NA
 2018908 2018909 SFV_0032 SFV_0033 caiB caiA TRUE 0.813 129.000 0.529 1.000 N NA
 2018909 2018910 SFV_0033 SFV_0034 caiA caiT TRUE 0.669 31.000 0.118 1.000 N NA
 2018911 1603010 SFV_0035 SFV_0036 fixA fixB TRUE 0.557 15.000 0.000 NA   NA
 1603010 2018912 SFV_0036 SFV_0037 fixB fixC FALSE 0.290 51.000 0.000 NA   NA
 2018912 2018913 SFV_0037 SFV_0038 fixC fixX TRUE 0.990 -3.000 0.167 0.058 Y NA
 2018913 2018914 SFV_0038 SFV_0039 fixX yaaU FALSE 0.255 59.000 0.000 1.000 N NA
 2018914 2018915 SFV_0039 SFV_0040 yaaU yabF FALSE 0.345 48.000 0.000 1.000   NA
 2018915 2018916 SFV_0040 SFV_0041 yabF kefC TRUE 0.982 -7.000 0.560 1.000   NA
 2018916 2018917 SFV_0041 SFV_0042 kefC folA FALSE 0.050 191.000 0.012 1.000 N NA
 2018918 2018919 SFV_0043 SFV_0044 apaH apaG TRUE 0.941 7.000 0.267 NA N NA
 2018919 2018920 SFV_0044 SFV_0045 apaG ksgA TRUE 0.841 3.000 0.078 NA N NA
 2018920 2018921 SFV_0045 SFV_0046 ksgA pdxA TRUE 0.952 -3.000 0.197 1.000 N NA
 2018921 2018922 SFV_0046 SFV_0047 pdxA surA TRUE 0.988 0.000 0.561 1.000 N NA
 2018922 2018923 SFV_0047 SFV_0048 surA imp TRUE 0.647 53.000 0.182 1.000 N NA
 2018925 2018926 SFV_0050 SFV_0051 yabO hepA TRUE 0.932 12.000 0.294 1.000 N NA
 2018926 2018927 SFV_0051 SFV_0052 hepA polB TRUE 0.606 165.000 0.098 1.000 Y NA
 2018927 2018928 SFV_0052 SFV_0053 polB araD FALSE 0.177 75.000 0.018 1.000 N NA
 2018928 2018929 SFV_0053 SFV_0054 araD araA FALSE 0.348 200.000 0.017 1.000 Y NA
 2018929 2018930 SFV_0054 SFV_0055 araA araB TRUE 0.841 11.000 0.138 1.000 N NA
 2018931 2018932 SFV_0056 SFV_0057 araC yabI FALSE 0.529 86.000 0.167 NA   NA
 2018933 2018934 SFV_0058 SFV_0059 yabJ yabK TRUE 0.981 -16.000 0.522 0.017 N NA
 2018934 2018935 SFV_0059 SFV_0060 yabK tbpA TRUE 0.984 -24.000 0.697 0.073 N NA
 2018935 2018936 SFV_0060 SFV_0061 tbpA yabN FALSE 0.201 164.000 0.010 0.073   NA
 2018937 2018938 SFV_0063 SFV_0064 leuD leuC TRUE 0.991 11.000 0.309 0.001 Y NA
 2018938 2018939 SFV_0064 SFV_0065 leuC leuB TRUE 0.994 3.000 0.275 0.001 Y NA
 2018939 2018940 SFV_0065 SFV_0066 leuB leuA TRUE 0.991 0.000 0.126 0.001 Y NA
 2018941 2018942 SFV_0067 SFV_0068 leuO ilvI FALSE 0.015 318.000 0.000 1.000 N NA
 2018942 2018943 SFV_0068 SFV_0069 ilvI ilvH TRUE 0.996 3.000 0.371 0.002 Y NA
 2018943 2018944 SFV_0069 SFV_0070 ilvH fruL TRUE 0.592 12.000 0.000 NA   NA
 2018944 2018945 SFV_0070 SFV_0071 fruL fruR FALSE 0.211 82.000 0.000 NA   NA
 2018947 2018948 SFV_0073 SFV_0074 insB yabB FALSE 0.005 559.000 0.000 NA   NA
 2018948 2018949 SFV_0074 SFV_0075 yabB yabC TRUE 0.988 2.000 0.635 NA   NA
 2018949 2018950 SFV_0075 SFV_0076 yabC ftsL TRUE 0.960 -3.000 0.227 1.000 N NA
 2018950 2018951 SFV_0076 SFV_0077 ftsL ftsI TRUE 0.790 16.000 0.124 1.000 N NA
 2018951 2018952 SFV_0077 SFV_0078 ftsI murE TRUE 0.954 -13.000 0.059 1.000 Y NA
 2018952 2018953 SFV_0078 SFV_0079 murE murF TRUE 0.998 -3.000 0.569 0.002 Y NA
 2018953 2018954 SFV_0079 SFV_0080 murF mraY TRUE 0.994 -6.000 0.309 0.004 Y NA
 2018954 2018955 SFV_0080 SFV_0081 mraY murD TRUE 0.998 3.000 0.647 0.004 Y NA
 2018955 2018956 SFV_0081 SFV_0082 murD ftsW TRUE 0.984 0.000 0.297 0.003 N NA
 2018956 2018957 SFV_0082 SFV_0083 ftsW murG TRUE 0.990 -3.000 0.647 1.000 N NA
 2018957 2018958 SFV_0083 SFV_0084 murG murC TRUE 0.929 54.000 0.283 1.000 Y NA
 2018958 2018959 SFV_0084 SFV_0085 murC ddlB TRUE 0.986 -7.000 0.153 0.004 Y NA
 2018959 2018960 SFV_0085 SFV_0086 ddlB ftsQ TRUE 0.993 2.000 0.372 NA Y NA
 2018960 2018961 SFV_0086 SFV_0087 ftsQ ftsA TRUE 0.778 90.000 0.389 NA N NA
 2018961 2018962 SFV_0087 SFV_0088 ftsA ftsZ TRUE 0.952 61.000 0.460 1.000 Y NA
 2018962 2018963 SFV_0088 SFV_0089 ftsZ lpxC FALSE 0.453 101.000 0.134 1.000 N NA
 2018963 2018964 SFV_0089 SFV_0090 lpxC yacA FALSE 0.243 78.000 0.000 1.000   NA
 2018964 2018965 SFV_0090 SFV_0091 yacA secA FALSE 0.405 62.000 0.065 1.000   NA
 2018965 2018966 SFV_0091 SFV_0092 secA mutT TRUE 0.587 60.000 0.168 1.000 N NA
 2018967 2018968 SFV_0093 SFV_0094 yacG yacF TRUE 0.956 10.000 0.356 NA   NA
 2018968 2018969 SFV_0094 SFV_0095 yacF yacE TRUE 0.910 0.000 0.110 NA   NA
 2018971 1603072 SFV_0097 SFV_0098 hofC hofB TRUE 0.659 -10.000 0.000 NA   NA
 1603072 2018972 SFV_0098 SFV_0099 hofB ppdD TRUE 0.633 10.000 0.000 NA   NA
 2018972 2018973 SFV_0099 SFV_0100 ppdD nadC FALSE 0.032 203.000 0.015 NA N NA
 2018974 2018975 SFV_0101 SFV_0102 ampD ampE TRUE 0.991 -3.000 0.249 1.000 Y NA
 2018977 2018978 SFV_0104 SFV_0105 pdhR aceE FALSE 0.489 161.000 0.276 1.000 N NA
 2018978 2018979 SFV_0105 SFV_0106 aceE aceF TRUE 0.971 15.000 0.220 1.000 Y NA
 2018979 2018980 SFV_0106 SFV_0107 aceF lpdA FALSE 0.475 322.000 0.463 1.000 Y NA
 2018982 2018983 SFV_0109 SFV_0110 acnB yacL FALSE 0.293 127.000 0.068 NA   NA
 2018984 2018985 SFV_0111 SFV_0112 speD speE TRUE 0.959 16.000 0.162 1.000 Y NA
 2018985 2018986 SFV_0112 SFV_0114 speE yacC TRUE 0.753 106.000 0.354 NA   NA
 2018991 2018992 SFV_0118 SFV_0119 yadG yadH TRUE 0.998 -3.000 0.688 0.093 Y NA
 2018992 2018993 SFV_0119 SFV_0120 yadH yadE FALSE 0.004 609.000 0.000 1.000 N NA
 2018996 2018997 SFV_0123 SFV_0124 panC panB TRUE 0.992 12.000 0.395 0.001 Y NA
 2018997 2018998 SFV_0124 SFV_0125 panB   FALSE 0.156 113.000 0.002 1.000   NA
 2019000 2019001 SFV_0127 SFV_0128 folK pcnB TRUE 0.962 -3.000 0.234 1.000 N NA
 2019001 2019002 SFV_0128 SFV_0129 pcnB yadB TRUE 0.815 93.000 0.131 1.000 Y NA
 2019002 2019003 SFV_0129 SFV_0130 yadB dksA TRUE 0.667 67.000 0.231 1.000 N NA
 2019003 2019004 SFV_0130 SFV_0131 dksA sfsA FALSE 0.247 178.000 0.151 NA   NA
 2019004 2019005 SFV_0131 SFV_0133 sfsA yadP TRUE 0.634 15.000 0.045 NA   NA
 2019006 2019007 SFV_0132 SFV_0134 hrpB mrcB FALSE 0.204 196.000 0.158 1.000 N NA
 2019007 2019008 SFV_0134 SFV_0135 mrcB fhuA FALSE 0.019 298.000 0.000 1.000 N NA
 2019008 2019009 SFV_0135 SFV_0136 fhuA fhuC TRUE 0.973 9.000 0.156 1.000 Y NA
 2019009 2019010 SFV_0136 SFV_0137 fhuC fhuD TRUE 0.972 0.000 0.031 1.000 Y NA
 2019010 2019011 SFV_0137 SFV_0138 fhuD fhuB TRUE 0.971 -3.000 0.000 1.000 Y NA
 2019013 2019014 SFV_0140 SFV_0141 yadQ yadR FALSE 0.220 82.000 0.031 NA   NA
 2019015 2019016 SFV_0142 SFV_0143 yadS yadT TRUE 0.772 38.000 0.213 NA   NA
 2019016 2019017 SFV_0143 SFV_0144 yadT pfs TRUE 0.706 -34.000 0.073 1.000 N NA
 2019018 2019019 SFV_0145 SFV_0146 dgt htrA FALSE 0.350 130.000 0.101 1.000 N NA
 2019019 1603121 SFV_0146 SFV_0147 htrA yaeG FALSE 0.108 155.000 0.000 NA   NA
 2019020 2019021 SFV_0148 SFV_0149 yaeH dapD FALSE 0.018 314.000 0.035 NA   NA
 2019021 2019022 SFV_0149 SFV_0150 dapD glnD TRUE 0.638 31.000 0.097 1.000 N NA
 2019022 2019023 SFV_0150 SFV_0151 glnD map TRUE 0.701 62.000 0.243 1.000 N NA
 2019024 2019025 SFV_0152 SFV_0153 rpsB tsf TRUE 0.757 258.000 0.748 1.000 Y NA
 2019025 2019026 SFV_0153 SFV_0154 tsf pyrH TRUE 0.685 147.000 0.416 1.000 N NA
 2019026 2019027 SFV_0154 SFV_0155 pyrH frr FALSE 0.352 292.000 0.626 1.000 N NA
 2019027 2019028 SFV_0155 SFV_0156 frr yaeM FALSE 0.221 92.000 0.032 1.000 N NA
 2019028 2019029 SFV_0156 SFV_0157 yaeM yaeS FALSE 0.407 189.000 0.025 1.000 Y NA
 2019029 2019030 SFV_0157 SFV_0158 yaeS cdsA TRUE 0.963 43.000 0.400 1.000 Y NA
 2019030 2019031 SFV_0158 SFV_0159 cdsA yaeL TRUE 0.761 12.000 0.080 1.000 N NA
 2019031 2019032 SFV_0159 SFV_0160 yaeL yaeT TRUE 0.946 30.000 0.204 1.000 Y NA
 2019032 2019033 SFV_0160 SFV_0161 yaeT hlpA TRUE 0.911 122.000 0.354 1.000 Y NA
 2019033 2019034 SFV_0161 SFV_0162 hlpA lpxD TRUE 0.985 40.000 0.814 1.000 Y NA
 2019034 2019035 SFV_0162 SFV_0163 lpxD fabZ TRUE 0.981 12.000 0.796 1.000 N NA
 2019035 2019036 SFV_0163 SFV_0164 fabZ lpxA TRUE 0.990 4.000 0.850 1.000 N NA
 2019036 2019037 SFV_0164 SFV_0165 lpxA lpxB TRUE 0.992 0.000 0.289 1.000 Y NA
 2019037 2019038 SFV_0165 SFV_0166 lpxB rnhB TRUE 0.950 -3.000 0.186 1.000 N NA
 2019038 2019039 SFV_0166 SFV_0167 rnhB dnaE TRUE 0.735 136.000 0.104 1.000 Y NA
 2019039 2019040 SFV_0167 SFV_0168 dnaE accA TRUE 0.809 13.000 0.122 1.000 N NA
 2019040 2019041 SFV_0168 SFV_0169 accA ldcC FALSE 0.148 99.000 0.010 1.000 N NA
 2019041 2019042 SFV_0169 SFV_0170 ldcC yaeR TRUE 0.773 57.000 0.039 NA Y NA
 2019042 1603145 SFV_0170 SFV_0171 yaeR mesJ FALSE 0.231 65.000 0.000 NA   NA
 2019043 2019044 SFV_0172 SFV_0173 yaeO yaeP TRUE 0.889 -13.000 0.179 NA   NA
 2019045 2019046 SFV_0174 SFV_0175 yaeQ yaeJ TRUE 0.797 -3.000 0.034 NA   NA
 2019046 2019047 SFV_0175 SFV_0176 yaeJ cutF TRUE 0.560 14.000 0.027 NA   NA
 2019048 2019049 SFV_0177 SFV_0178 yaeF proS FALSE 0.220 44.000 0.002 NA   NA
 2019049 2019050 SFV_0178 SFV_0179 proS yaeB FALSE 0.261 111.000 0.048 NA   NA
 2019050 2019051 SFV_0179 SFV_0180 yaeB rcsF TRUE 0.963 -3.000 0.247 NA   NA
 2019051 2019052 SFV_0180 SFV_0181 rcsF yaeC TRUE 0.816 118.000 0.500 NA   NA
 2019052 2019053 SFV_0181 SFV_0182 yaeC yaeE TRUE 0.976 40.000 0.411 0.060 Y NA
 2019053 2019054 SFV_0182 SFV_0183 yaeE abc TRUE 0.994 8.000 0.584 1.000 Y NA
 2019055 1603159 SFV_0184 SFV_0185 yaeD rrsH FALSE 0.010 364.000 0.000 NA   NA
 1603159 1603160 SFV_0185 SFV_0186 rrsH   FALSE 0.212 86.000 0.000 NA   NA
 1603160 1603161 SFV_0186 SFV_0187   rrlH FALSE 0.063 194.000 0.000 NA   NA
 1603161 1603162 SFV_0187 SFV_0188 rrlH rrfH FALSE 0.205 95.000 0.000 NA   NA
 1603162 1603163 SFV_0188 SFV_0189 rrfH   FALSE 0.279 53.000 0.000 NA   NA
 1603163 2019056 SFV_0189 SFV_0190   yafB FALSE 0.098 163.000 0.000 NA   NA
 2019057 2019058 SFV_0191 SFV_0192   yafC FALSE 0.298 50.000 0.000 1.000 N NA
 2019059 2019060 SFV_0193 SFV_0194 yafD yafE FALSE 0.335 78.000 0.066 NA   NA
 2019061 2019062 SFV_0195 SFV_0196 dniR gloB TRUE 0.671 72.000 0.233 1.000   NA
 2019065 1603174 SFV_0198 SFV_0200 dnaQ   FALSE 0.163 133.000 0.000 NA   NA
 2019066 2019067 SFV_0201 SFV_0202 safA   TRUE 0.986 11.000 1.000 NA   NA
 2019067 2019068 SFV_0202 SFV_0203   safB FALSE 0.108 155.000 0.000 NA   NA
 2019068 1603178 SFV_0203 SFV_0204 safB safC TRUE 0.780 -3.000 0.000 NA   NA
 1603178 2019069 SFV_0204 SFV_0205 safC   FALSE 0.184 120.000 0.000 NA   NA
 2019069 2019070 SFV_0205 SFV_0206   sat1 FALSE 0.200 195.000 0.154 NA   NA
 2019070 2019071 SFV_0206 SFV_0207 sat1 sat2 TRUE 0.868 -13.000 0.154 NA   NA
 2019072 2019073 SFV_0208 SFV_0209     TRUE 0.891 24.000 0.000 1.000 Y NA
 2019074 2019075 SFV_0210 SFV_0211     TRUE 0.644 -12.000 0.000 NA   NA
 2019075 2019076 SFV_0211 SFV_0212     TRUE 0.811 -3.000 0.000 1.000   NA
 2019076 2019077 SFV_0212 SFV_0213     FALSE 0.226 66.000 0.000 NA   NA
 2019077 2019078 SFV_0213 SFV_0214     FALSE 0.211 74.000 0.000 NA   NA
 2019078 2019079 SFV_0214 SFV_0215     FALSE 0.003 755.000 0.000 NA   NA
 2019079 2019080 SFV_0215 SFV_0216     TRUE 0.827 102.000 0.500 NA   NA
 2019081 2019082 SFV_0217 SFV_0218     FALSE 0.146 301.000 0.000 1.000 Y NA
 2019082 2019083 SFV_0218 SFV_0219     TRUE 0.716 -6.000 0.000 NA   NA
 2019083 2019084 SFV_0219 SFV_0220     TRUE 0.917 1.000 0.143 NA   NA
 2019084 2019085 SFV_0220 SFV_0221     TRUE 0.921 14.000 0.286 NA   NA
 2019085 2019086 SFV_0221 SFV_0222     TRUE 0.936 0.000 0.161 NA   NA
 2019086 2019087 SFV_0222 SFV_0223     TRUE 0.780 -3.000 0.000 NA   NA
 2019087 2019088 SFV_0223 SFV_0224     TRUE 0.590 -22.000 0.000 NA   NA
 2019088 2019089 SFV_0224 SFV_0225     TRUE 0.984 1.000 0.500 NA   NA
 2019089 2019090 SFV_0225 SFV_0226     TRUE 0.970 0.000 0.286 NA   NA
 2019090 2019091 SFV_0226 SFV_0227     TRUE 0.992 0.000 0.750 NA   NA
 2019091 2019092 SFV_0227 SFV_0228     TRUE 0.986 3.000 0.600 NA   NA
 2019092 2019093 SFV_0228 SFV_0229     TRUE 0.951 10.000 0.333 NA   NA
 2019093 2019094 SFV_0229 SFV_0230     TRUE 0.930 1.000 0.167 NA   NA
 2019094 2019095 SFV_0230 SFV_0231     FALSE 0.177 126.000 0.000 NA   NA
 2019095 2019096 SFV_0231 SFV_0232     TRUE 0.814 0.000 0.000 1.000   NA
 2019097 2019098 SFV_0233 SFV_0234     TRUE 0.759 36.000 0.182 1.000   NA
 2019099 2019100 SFV_0235 SFV_0236   ymfR TRUE 0.813 12.000 0.120 NA   NA
 2019100 2019101 SFV_0236 SFV_0237 ymfR   TRUE 0.989 0.000 0.600 NA   NA
 2019101 2019102 SFV_0237 SFV_0238     TRUE 0.904 -22.000 0.222 NA   NA
 2019102 2019103 SFV_0238 SFV_0239     TRUE 0.848 15.000 0.174 NA   NA
 2019103 2019104 SFV_0239 SFV_0240     FALSE 0.497 50.000 0.087 NA   NA
 2019104 2019105 SFV_0240 SFV_0241     TRUE 0.969 3.000 0.333 NA   NA
 2019105 2019106 SFV_0241 SFV_0242     TRUE 0.861 -3.000 0.058 NA   NA
 2019106 2019107 SFV_0242 SFV_0243     TRUE 0.657 -25.000 0.047 NA   NA
 2019107 2019108 SFV_0243 SFV_0244     TRUE 0.986 -3.000 0.500 NA   NA
 2019108 2019109 SFV_0244 SFV_0245     FALSE 0.312 163.000 0.167 NA   NA
 2019109 2019110 SFV_0245 SFV_0246     TRUE 0.994 0.000 1.000 NA   NA
 2019110 2019111 SFV_0246 SFV_0247     TRUE 0.994 0.000 0.900 NA   NA
 2019111 2019112 SFV_0247 SFV_0248     FALSE 0.464 142.000 0.200 NA   NA
 2019112 2019113 SFV_0248 SFV_0249     TRUE 0.681 61.000 0.222 NA   NA
 2019113 2019114 SFV_0249 SFV_0250     TRUE 0.964 -3.000 0.250 NA   NA
 2019114 2019115 SFV_0250 SFV_0251     TRUE 0.869 0.000 0.062 NA   NA
 2019115 2019116 SFV_0251 SFV_0252     TRUE 0.994 0.000 1.000 NA   NA
 2019116 2019117 SFV_0252 SFV_0253     TRUE 0.798 -13.000 0.083 NA   NA
 2019117 2019118 SFV_0253 SFV_0254     TRUE 0.825 -9.000 0.083 NA   NA
 2019118 2019119 SFV_0254 SFV_0255     FALSE 0.005 563.000 0.000 NA   NA
 2019120 2019121 SFV_0256 SFV_0257 gtrV gtrB TRUE 0.780 -3.000 0.000 NA   NA
 2019121 2019122 SFV_0257 SFV_0258 gtrB gtra TRUE 0.780 -3.000 0.000 NA   NA
 2019122 2019123 SFV_0258 SFV_0259 gtra   FALSE 0.031 262.000 0.000 1.000   NA
 2019123 2019124 SFV_0259 SFV_0260     FALSE 0.003 1041.000 0.000 1.000   NA
 2019124 2019125 SFV_0260 SFV_0261     TRUE 0.750 2.000 0.000 NA   NA
 2019125 2019126 SFV_0261 SFV_0262     TRUE 0.634 -13.000 0.000 NA   NA
 2019126 2019127 SFV_0262 SFV_0263     FALSE 0.198 103.000 0.000 NA   NA
 2019127 2019128 SFV_0263 SFV_0264     FALSE 0.006 504.000 0.000 NA   NA
 2019128 2019129 SFV_0264 SFV_0265     TRUE 0.611 -16.000 0.000 NA   NA
 2019129 2019130 SFV_0265 SFV_0266     TRUE 0.981 -3.000 0.400 NA   NA
 2019130 2019131 SFV_0266 SFV_0267     FALSE 0.113 152.000 0.000 NA   NA
 2019133 2019134 SFV_0269 SFV_0270     FALSE 0.004 706.000 0.000 NA   NA
 2019134 2019135 SFV_0270 SFV_0271     FALSE 0.008 400.000 0.000 1.000 N NA
 2019136 2019137 SFV_0272 SFV_0273     TRUE 0.961 -10.000 0.364 NA   NA
 2019137 2019138 SFV_0273 SFV_0274     FALSE 0.003 1033.000 0.000 NA   NA
 2019138 2019139 SFV_0274 SFV_0275     TRUE 0.695 -7.000 0.000 NA   NA
 2019139 2019140 SFV_0275 SFV_0276     FALSE 0.021 287.000 0.000 NA   NA
 2019140 2019141 SFV_0276 SFV_0277     FALSE 0.091 182.000 0.000 1.000   NA
 2019141 2019142 SFV_0277 SFV_0278     FALSE 0.004 669.000 0.000 NA   NA
 2019142 2019143 SFV_0278 SFV_0279     TRUE 0.899 -16.000 0.200 NA   NA
 2019143 2019144 SFV_0279 SFV_0280     FALSE 0.146 148.000 0.000 1.000   NA
 2019144 2019145 SFV_0280 SFV_0281     FALSE 0.056 202.000 0.000 NA   NA
 2019145 2019146 SFV_0281 SFV_0282     FALSE 0.006 517.000 0.000 NA   NA
 2019146 2019147 SFV_0282 SFV_0283     TRUE 0.782 141.000 0.182 1.000 Y NA
 1603258 2019148 SFV_0284 SFV_0285   proA FALSE 0.191 115.000 0.000 NA   NA
 2019148 2019149 SFV_0285 SFV_0286 proA proB TRUE 0.964 12.000 0.026 0.001 Y NA
 2019149 2019150 SFV_0286 SFV_0287 proB insB FALSE 0.068 191.000 0.000 1.000 N NA
 2019151 2019152 SFV_0288 SFV_0289   phoE FALSE 0.200 101.000 0.000 NA   NA
 2019153 2019154 SFV_0290 SFV_0291 crl yafA FALSE 0.333 58.000 0.048 NA   NA
 2019154 2019155 SFV_0291 SFV_0292 yafA gpt FALSE 0.249 92.000 0.040 NA   NA
 1603268 2019157 SFV_0294 SFV_0295 prfH   FALSE 0.189 116.000 0.000 NA   NA
 2019157 2019158 SFV_0295 SFV_0296   yafP FALSE 0.044 219.000 0.000 NA   NA
 2019158 2019159 SFV_0296 SFV_0297 yafP yafO TRUE 0.633 10.000 0.000 NA   NA
 2019159 2019160 SFV_0297 SFV_0298 yafO yafN TRUE 0.982 3.000 0.500 NA   NA
 2019160 2019161 SFV_0298 SFV_0299 yafN dinP FALSE 0.246 52.000 0.000 NA N NA
 2019161 2019162 SFV_0299 SFV_0301 dinP mbhA FALSE 0.185 122.000 0.000 1.000 N NA
 2019164 2019165 SFV_0302 SFV_0303 yafM yafL FALSE 0.069 176.000 0.000 NA N NA
 2019167 2019168 SFV_0305 SFV_0306 yafJ gmhA FALSE 0.292 206.000 0.229 1.000   NA
 2019172 2019173 SFV_0310 SFV_0311     FALSE 0.066 192.000 0.000 NA   NA
 2019173 2019174 SFV_0311 SFV_0312     FALSE 0.099 162.000 0.000 NA   NA
 2019174 2019175 SFV_0312 SFV_0313     TRUE 0.704 22.000 0.095 NA   NA
 2019175 2019176 SFV_0313 SFV_0314     TRUE 0.695 23.000 0.095 NA   NA
 2019176 2019177 SFV_0314 SFV_0315   insB FALSE 0.003 1078.000 0.000 NA   NA
 2019178 2019179 SFV_0316 SFV_0317   ykgE FALSE 0.014 323.000 0.000 NA   NA
 2019179 2019180 SFV_0317 SFV_0318 ykgE ykgF TRUE 0.981 11.000 0.286 NA Y NA
 2019180 2019181 SFV_0318 SFV_0319 ykgF ykgG TRUE 0.977 -7.000 0.286 0.001   NA
 2019182 2019183 SFV_0320 SFV_0321   ykgH FALSE 0.210 76.000 0.000 NA   NA
 2019183 2019184 SFV_0321 SFV_0322 ykgH betA FALSE 0.046 214.000 0.000 NA   NA
 2019184 2019185 SFV_0322 SFV_0323 betA betB TRUE 0.974 14.000 0.634 1.000 N NA
 2019185 2019186 SFV_0323 SFV_0324 betB betI TRUE 0.957 14.000 0.459 1.000 N NA
 2019191 2019192 SFV_0329 SFV_0330 tauA tauB TRUE 0.937 13.000 0.047 1.000 Y NA
 2019192 2019193 SFV_0330 SFV_0331 tauB tauC TRUE 0.997 -3.000 0.728 1.000 Y NA
 2019193 2019194 SFV_0331 SFV_0332 tauC tauD TRUE 0.956 -3.000 0.214 1.000 N NA
 1603308 2019196 SFV_0334 SFV_0335 yaiU   FALSE 0.410 -825.000 0.000 NA   NA
 2019196 2019197 SFV_0335 SFV_0336     TRUE 0.891 24.000 0.000 1.000 Y NA
 2019197 2019198 SFV_0336 SFV_0337     FALSE 0.461 206.000 0.000 0.042 Y NA
 2019198 2019199 SFV_0337 SFV_0338   yaiV FALSE 0.005 590.000 0.000 NA   NA
 2019201 2019202 SFV_0340 SFV_0341 sbmA yaiW TRUE 0.624 13.000 0.000 1.000   NA
 2019206 2019207 SFV_0345 SFV_0346 yaiB phoA FALSE 0.209 101.000 0.032 NA   NA
 2019207 2019208 SFV_0346 SFV_0347 phoA psiF FALSE 0.209 101.000 0.032 NA   NA
 2019209 2019210 SFV_0348 SFV_0349     TRUE 0.972 0.000 0.000 1.000 Y NA
 2019213 2019214 SFV_0352 SFV_0353 yaiI aroL FALSE 0.049 183.000 0.007 NA   NA
 2019214 2019215 SFV_0353 SFV_0354 aroL yaiA FALSE 0.366 50.000 0.044 NA   NA
 2019215 2019216 SFV_0354 SFV_0355 yaiA aroM FALSE 0.027 258.000 0.000 NA   NA
 2019216 2019217 SFV_0355 SFV_0356 aroM yaiE FALSE 0.285 72.000 0.049 NA   NA
 2019217 2019218 SFV_0356 SFV_0357 yaiE   FALSE 0.051 209.000 0.000 NA   NA
 2019218 2019219 SFV_0357 SFV_0358     TRUE 0.780 -3.000 0.000 NA   NA
 2019222 2019223 SFV_0361 SFV_0362 araJ sbcC FALSE 0.422 30.000 0.030 1.000 N NA
 2019223 2019224 SFV_0362 SFV_0363 sbcC sbcD TRUE 0.984 -3.000 0.021 0.001 Y NA
 2019225 2019226 SFV_0364 SFV_0365 phoB phoR TRUE 0.969 58.000 0.453 0.014 Y NA
 2019226 2019227 SFV_0365 SFV_0366 phoR brnQ FALSE 0.008 407.000 0.000 1.000 N NA
 2019227 2019228 SFV_0366 SFV_0367 brnQ proY TRUE 0.944 76.000 0.348 0.086 Y NA
 2019228 2019229 SFV_0367 SFV_0368 proY malZ FALSE 0.263 159.000 0.123 1.000 N NA
 2019230 2019231 SFV_0370 SFV_0371 queA tgt TRUE 0.969 55.000 0.360 0.001 Y NA
 2019231 2019232 SFV_0371 SFV_0372 tgt yajC TRUE 0.901 23.000 0.325 NA N NA
 2019232 2019233 SFV_0372 SFV_0373 yajC secD TRUE 0.882 28.000 0.045 NA Y NA
 2019233 2019234 SFV_0373 SFV_0374 secD secF TRUE 0.986 11.000 0.206 0.001 Y NA
 2019234 2019235 SFV_0374 SFV_0375 secF yajD FALSE 0.161 129.000 0.015 1.000   NA
 2019236 2019237 SFV_0376 SFV_0377 tsx yajI FALSE 0.018 298.000 0.000 NA   NA
 2019238 2019239 SFV_0378 SFV_0379 ybaD ribD TRUE 0.882 22.000 0.277 NA N NA
 2019239 2019240 SFV_0379 SFV_0380 ribD ribH TRUE 0.919 35.000 0.034 0.002 Y NA
 2019240 2019241 SFV_0380 SFV_0381 ribH nusB TRUE 0.925 20.000 0.347 1.000 N NA
 2019241 2019242 SFV_0381 SFV_0382 nusB thiL TRUE 0.640 78.000 0.225 1.000 N NA
 2019242 2019243 SFV_0382 SFV_0383 thiL pgpA TRUE 0.911 -13.000 0.206 1.000 N NA
 2019244 2019245 SFV_0384 SFV_0385 yajO dxs FALSE 0.202 55.000 0.009 1.000 N NA
 2019245 2019246 SFV_0385 SFV_0386 dxs ispA TRUE 0.907 25.000 0.060 1.000 Y NA
 2019246 2019247 SFV_0386 SFV_0387 ispA xseB TRUE 0.806 0.000 0.035 1.000 N NA
 2019249 2019250 SFV_0389 SFV_0390 thiJ apbA TRUE 0.812 -37.000 0.155 NA   NA
 2019252 2019253 SFV_0392 SFV_0393     TRUE 0.570 53.000 0.000 0.010   NA
 2019253 2019254 SFV_0393 SFV_0394   yajR FALSE 0.091 182.000 0.000 1.000   NA
 2019255 2019256 SFV_0395 SFV_0396     FALSE 0.107 237.000 0.000 0.010   NA
 2019257 2019258 SFV_0397 SFV_0398     FALSE 0.185 135.000 0.000 1.000   NA
 2019258 1603373 SFV_0398 SFV_0399   cyoE FALSE 0.155 137.000 0.000 NA   NA
 1603373 2019259 SFV_0399 SFV_0400 cyoE cyoD TRUE 0.592 12.000 0.000 NA   NA
 2019259 2019260 SFV_0400 SFV_0401 cyoD cyoC TRUE 0.997 0.000 0.485 0.055 Y NA
 2019260 1603376 SFV_0401 SFV_0402 cyoC cyoB FALSE 0.442 -76.000 0.000 NA   NA
 1603376 1603377 SFV_0402 SFV_0403 cyoB cyoA FALSE 0.484 22.000 0.000 NA   NA
 1603377 2019261 SFV_0403 SFV_0404 cyoA   FALSE 0.238 63.000 0.000 NA   NA
 2019261 2019262 SFV_0404 SFV_0405     TRUE 0.582 -24.000 0.000 NA   NA
 2019262 2019263 SFV_0405 SFV_0406     FALSE 0.506 20.000 0.000 NA   NA
 2019263 2019264 SFV_0406 SFV_0407     TRUE 0.969 -3.000 0.000 NA Y NA
 2019264 2019265 SFV_0407 SFV_0408   ampG FALSE 0.012 370.000 0.000 1.000   NA
 2019265 2019266 SFV_0408 SFV_0409 ampG yajG TRUE 0.790 44.000 0.256 NA   NA
 2019267 2019268 SFV_0410 SFV_0411 tig clpP TRUE 0.585 247.000 0.351 1.000 Y NA
 2019268 2019269 SFV_0411 SFV_0412 clpP clpX TRUE 0.908 126.000 0.352 1.000 Y NA
 2019269 2019270 SFV_0412 SFV_0413 clpX lon TRUE 0.721 188.000 0.201 0.089 Y NA
 2019270 2019271 SFV_0413 SFV_0414 lon hupB FALSE 0.042 209.000 0.000 NA N NA
 2019271 2019272 SFV_0414 SFV_0415 hupB ybaU FALSE 0.054 192.000 0.000 NA N NA
 2019272 2019273 SFV_0415 SFV_0416 ybaU ybaV FALSE 0.126 151.000 0.033 1.000 N NA
 2019273 2019274 SFV_0416 SFV_0417 ybaV ybaW FALSE 0.235 94.000 0.027 1.000   NA
 2019275 2019276 SFV_0418 SFV_0419 ybaX ybaE FALSE 0.234 65.000 0.019 1.000   NA
 2019277 2019278 SFV_0420 SFV_0421 cof ybaO FALSE 0.320 46.000 0.020 1.000   NA
 2019278 2019279 SFV_0421 SFV_0422 ybaO mdlA TRUE 0.764 30.000 0.179 1.000 N NA
 2019279 2019280 SFV_0422 SFV_0423 mdlA mdlB TRUE 0.998 -7.000 0.911 0.005 Y NA
 2019280 2019281 SFV_0423 SFV_0424 mdlB glnK FALSE 0.330 43.000 0.028 1.000 N NA
 2019281 2019282 SFV_0424 SFV_0425 glnK amtB TRUE 0.734 30.000 0.156 1.000 N NA
 2019284 2019285 SFV_0427 SFV_0428 ybaY   FALSE 0.208 93.000 0.000 NA   NA
 2019288 2019289 SFV_0431 SFV_0432 ylaB ylaC FALSE 0.104 158.000 0.000 NA   NA
 2019289 2019290 SFV_0432 SFV_0433 ylaC ylaD FALSE 0.439 77.000 0.101 1.000   NA
 2019290 2019291 SFV_0433 SFV_0434 ylaD ybaJ FALSE 0.007 416.000 0.000 NA   NA
 2019291 2019292 SFV_0434 SFV_0435 ybaJ acrB FALSE 0.005 546.000 0.000 NA   NA
 2019292 2019293 SFV_0435 SFV_0436 acrB acrA TRUE 0.939 23.000 0.458 1.000 N NA
 2019294 2019295 SFV_0437 SFV_0438 acrR aefA FALSE 0.174 128.000 0.000 1.000 N NA
 2019296 2019297 SFV_0439 SFV_0440 ybaM priC TRUE 0.959 14.000 0.474 NA   NA
 2019298 2019299 SFV_0441 SFV_0442 ybaN apt FALSE 0.143 153.000 0.043 NA   NA
 2019299 2019300 SFV_0442 SFV_0443 apt dnaX FALSE 0.330 129.000 0.088 1.000 N NA
 2019300 2019301 SFV_0443 SFV_0444 dnaX ybaB TRUE 0.852 53.000 0.411 NA   NA
 2019301 2019302 SFV_0444 SFV_0445 ybaB recR TRUE 0.989 0.000 0.604 NA   NA
 2019302 1603420 SFV_0445 SFV_0446 recR htpG FALSE 0.195 110.000 0.000 NA   NA
 1603420 2019303 SFV_0446 SFV_0447 htpG adk FALSE 0.078 181.000 0.000 NA   NA
 2019303 2019304 SFV_0447 SFV_0448 adk hemH FALSE 0.128 132.000 0.013 1.000 N NA
 2019307 2019308 SFV_0451 SFV_0452 ybaL fsr FALSE 0.079 238.000 0.000 0.085 N NA
 2019309 2019310 SFV_0454 SFV_0455 ybaK ybaP FALSE 0.046 204.000 0.022 NA   NA
 2019313 2019314 SFV_0458 SFV_0459 ybaS ybaT TRUE 0.964 3.000 0.028 1.000 Y NA
 2019314 2019315 SFV_0459 SFV_0460 ybaT ybbI FALSE 0.182 125.000 0.000 1.000 N NA
 2019316 2019317 SFV_0461 SFV_0462 ybbJ ybbK TRUE 0.986 9.000 0.313 NA Y NA
 2019318 2019319 SFV_0463 SFV_0464 ybbL ybbM TRUE 0.846 -13.000 0.127 NA   NA
 2019320 2019321 SFV_0465 SFV_0466 ybbN ybbO TRUE 0.728 25.000 0.118 1.000   NA
 2019321 1603441 SFV_0466 SFV_0468 ybbO tesA FALSE 0.417 29.000 0.000 NA   NA
 2019322 2019323 SFV_0467 SFV_0469 ybbA ybbP TRUE 0.996 -3.000 0.535 1.000 Y NA
 2019324 2019325 SFV_0470 SFV_0471 ybbB ybbS FALSE 0.165 69.000 0.012 NA   NA
 2019326 2019327 SFV_0472 SFV_0473 ybbT ybbU TRUE 0.878 78.000 0.625 1.000 N NA
 2019327 2019328 SFV_0473 SFV_0474 ybbU gcl FALSE 0.525 36.000 0.054 1.000   NA
 2019329 2019330 SFV_0475 SFV_0476 insB ylbA FALSE 0.042 223.000 0.000 NA   NA
 2019330 2019331 SFV_0476 SFV_0477 ylbA ylbB TRUE 0.734 11.000 0.059 NA   NA
 2019332 2019333 SFV_0478 SFV_0479 ylbF arcC TRUE 0.979 -3.000 0.375 NA   NA
 2019334 2019335 SFV_0480 SFV_0481 purK purE TRUE 0.991 -3.000 0.136 0.001 Y NA
 2019335 2019336 SFV_0481 SFV_0482 purE ybbF FALSE 0.181 118.000 0.016 1.000   NA
 2019336 2019337 SFV_0482 SFV_0483 ybbF ppiB TRUE 0.956 3.000 0.237 1.000   NA
 2019339 2019340 SFV_0485 SFV_0486 ybcI ybcJ FALSE 0.143 108.000 0.011 NA   NA
 2019340 2019341 SFV_0486 SFV_0487 ybcJ folD TRUE 0.704 -28.000 0.055 1.000   NA
 2019342 1603463 SFV_0488 SFV_0489 sfmA sfmC FALSE 0.008 405.000 0.000 NA   NA
 1603463 1603464 SFV_0489 SFV_0490 sfmC sfmD FALSE 0.404 31.000 0.000 NA   NA
 2019344 1603467 SFV_0492 SFV_0493   sfmH FALSE 0.003 1085.000 0.000 NA   NA
 1603467 2019345 SFV_0493 SFV_0494 sfmH sfmF TRUE 0.609 11.000 0.000 NA   NA
 2019346 2019347 SFV_0495 SFV_0496     TRUE 0.905 -42.000 0.000 1.000 Y NA
 2019347 2019348 SFV_0496 SFV_0497   fimZ FALSE 0.213 76.000 0.000 1.000 N NA
 2019349 2019350 SFV_0499 SFV_0500 envY ybcH FALSE 0.075 183.000 0.000 NA   NA
 2019350 1603475 SFV_0500 SFV_0501 ybcH nfrA TRUE 0.760 1.000 0.000 NA   NA
 1603475 2019351 SFV_0501 SFV_0502 nfrA nfrB TRUE 0.634 -13.000 0.000 NA   NA
 2019351 2019352 SFV_0502 SFV_0503 nfrB ybcZ FALSE 0.095 225.000 0.000 0.089 N NA
 2019352 2019353 SFV_0503 SFV_0504 ybcZ ylcA TRUE 0.997 -10.000 0.600 0.001 Y NA
 1603479 2019354 SFV_0505 SFV_0506 ylcB ylcC FALSE 0.462 24.000 0.000 NA   NA
 2019354 1603481 SFV_0506 SFV_0507 ylcC ylcD TRUE 0.544 16.000 0.000 NA   NA
 2019355 2019356 SFV_0508 SFV_0509     FALSE 0.254 236.000 0.000 1.000 Y NA
 2019358 2019359 SFV_0511 SFV_0512     TRUE 0.782 141.000 0.182 1.000 Y NA
 2019359 2019360 SFV_0512 SFV_0513     FALSE 0.023 1713.000 0.000 1.000 Y NA
 2019360 2019361 SFV_0513 SFV_0514     TRUE 0.905 -42.000 0.000 1.000 Y NA
 2019362 2019363 SFV_0515 SFV_0516 ybdE pheP FALSE 0.384 101.000 0.000 0.085 N NA
 2019364 2019365 SFV_0517 SFV_0518 ybdG nfnB FALSE 0.199 108.000 0.000 1.000 N NA
 2019365 2019366 SFV_0518 SFV_0519 nfnB ybdF FALSE 0.206 94.000 0.000 NA   NA
 2019366 2019367 SFV_0519 SFV_0520 ybdF ybdJ FALSE 0.231 65.000 0.000 NA   NA
 2019367 2019368 SFV_0520 SFV_0521 ybdJ ybdK FALSE 0.226 66.000 0.000 NA   NA
 2019370 2019371 SFV_0523 SFV_0524     FALSE 0.276 270.000 0.000 0.041 Y NA
 2019371 2019372 SFV_0524 SFV_0525     FALSE 0.254 236.000 0.000 1.000 Y NA
 2019372 2019373 SFV_0525 SFV_0526     FALSE 0.527 52.000 0.000 0.081   NA
 2019375 2019376 SFV_0528 SFV_0529 entD fepA TRUE 0.962 25.000 0.700 1.000 N NA
 2019377 2019378 SFV_0530 SFV_0531 fes ybdZ TRUE 0.967 3.000 0.320 NA   NA
 2019378 2019379 SFV_0531 SFV_0532 ybdZ entF TRUE 0.886 -3.000 0.080 NA   NA
 2019381 1603509 SFV_0534 SFV_0535 insB fepE FALSE 0.004 652.000 0.000 NA   NA
 2019382 2019383 SFV_0536 SFV_0537 fepC fepG TRUE 0.973 -3.000 0.038 1.000 Y NA
 2019383 2019384 SFV_0537 SFV_0538 fepG fepD TRUE 0.981 -3.000 0.000 0.057 Y NA
 1603515 2019387 SFV_0541 SFV_0542 entC entE TRUE 0.633 10.000 0.000 NA   NA
 2019387 2019388 SFV_0542 SFV_0543 entE entB TRUE 0.992 14.000 0.667 1.000 Y NA
 2019388 2019389 SFV_0543 SFV_0544 entB entA TRUE 0.971 0.000 0.024 1.000 Y NA
 2019389 2019390 SFV_0544 SFV_0545 entA ybdB TRUE 0.970 3.000 0.065 NA Y NA
 2019390 2019391 SFV_0545 SFV_0546 ybdB cstA FALSE 0.341 181.000 0.222 NA N NA
 2019391 2019392 SFV_0546 SFV_0547 cstA ybdD FALSE 0.483 182.000 0.333 NA   NA
 2019395 2019396 SFV_0550 SFV_0551 ybdM   FALSE 0.376 28.000 0.000 NA N NA
 2019396 2019397 SFV_0551 SFV_0552     TRUE 0.879 27.000 0.000 1.000 Y NA
 2019397 2019398 SFV_0552 SFV_0553     FALSE 0.093 167.000 0.000 NA   NA
 2019398 2019399 SFV_0553 SFV_0554     FALSE 0.212 73.000 0.000 NA   NA
 2019400 2019401 SFV_0555 SFV_0556     TRUE 0.772 57.000 0.000 1.000 Y NA
 2019402 2019403 SFV_0557 SFV_0558 ybdO dsbG FALSE 0.091 210.000 0.067 1.000 N NA
 2019404 2019405 SFV_0559 SFV_0560 ahpC ahpF TRUE 0.712 245.000 0.551 1.000 Y NA
 2019408 2019409 SFV_0563 SFV_0564 rnk rna FALSE 0.031 229.000 0.018 1.000 N NA
 2019409 2019410 SFV_0564 SFV_0565 rna ybdS FALSE 0.189 96.000 0.024 1.000 N NA
 2019410 2019411 SFV_0565 SFV_0566 ybdS citG TRUE 0.692 51.000 0.194 1.000 N NA
 2019411 2019412 SFV_0566 SFV_0567 citG ybdU TRUE 0.986 -25.000 0.400 1.000 Y NA
 2019412 2019413 SFV_0567 SFV_0568 ybdU citF TRUE 0.717 4.000 0.000 1.000 N NA
 2019413 2019414 SFV_0568 SFV_0569 citF citE TRUE 0.823 -31.000 0.000 0.001 N NA
 2019414 2019415 SFV_0569 SFV_0570 citE citD TRUE 0.993 -3.000 0.537 0.001 N NA
 2019415 1603545 SFV_0570 SFV_0571 citD citC TRUE 0.557 15.000 0.000 NA   NA
 1603545 2019416 SFV_0571 SFV_0572 citC insB FALSE 0.051 209.000 0.000 NA   NA
 2019417 2019418 SFV_0573 SFV_0574   ybhA FALSE 0.188 134.000 0.000 1.000   NA
 2019419 2019420 SFV_0575 SFV_0576 modC modB TRUE 0.997 3.000 0.537 0.001 Y NA
 2019420 2019421 SFV_0576 SFV_0577 modB modA TRUE 0.998 0.000 0.627 0.001 Y NA
 2019421 2019422 SFV_0577 SFV_0578 modA   FALSE 0.173 167.000 0.072 NA   NA
 2019423 2019424 SFV_0579 SFV_0580 modE modF FALSE 0.390 68.000 0.009 0.088   NA
 2019424 2019425 SFV_0580 SFV_0581 modF galE FALSE 0.028 261.000 0.023 1.000   NA
 2019425 2019426 SFV_0581 SFV_0582 galE galT TRUE 0.895 10.000 0.053 0.001 N NA
 2019426 2019427 SFV_0582 SFV_0583 galT galK TRUE 0.984 4.000 0.370 0.001 N NA
 2019427 2019428 SFV_0583 SFV_0584 galK galM TRUE 0.985 -6.000 0.083 0.001 Y NA
 2019428 2019429 SFV_0584 SFV_0585 galM gpmA FALSE 0.328 203.000 0.009 1.000 Y NA
 2019431 2019432 SFV_0587 SFV_0588   ybgR FALSE 0.320 114.000 0.057 1.000   NA
 2019433 2019434 SFV_0589 SFV_0590 pnuC nadA TRUE 0.836 38.000 0.023 1.000 Y NA
 2019434 1603565 SFV_0590 SFV_0591 nadA   FALSE 0.030 249.000 0.000 NA   NA
 1603565 1603566 SFV_0591 SFV_0592     TRUE 0.713 4.000 0.000 NA   NA
 1603566 1603567 SFV_0592 SFV_0593     FALSE 0.156 136.000 0.000 NA   NA
 1603567 2019435 SFV_0593 SFV_0594   ybgF FALSE 0.095 165.000 0.000 NA   NA
 2019435 2019436 SFV_0594 SFV_0595 ybgF pal TRUE 0.823 10.000 0.088 1.000   NA
 2019436 2019437 SFV_0595 SFV_0596 pal tolB TRUE 0.939 35.000 0.592 1.000 N NA
 2019437 2019438 SFV_0596 SFV_0597 tolB tolA FALSE 0.204 133.000 0.051 NA N NA
 2019438 2019439 SFV_0597 SFV_0598 tolA tolR FALSE 0.438 65.000 0.114 NA N NA
 2019439 2019440 SFV_0598 SFV_0599 tolR tolQ TRUE 0.996 4.000 0.556 0.069 Y NA
 2019440 2019441 SFV_0599 SFV_0600 tolQ ybgC TRUE 0.983 6.000 0.593 1.000   NA
 2019441 2019442 SFV_0600 SFV_0601 ybgC ybgE FALSE 0.251 150.000 0.095 NA   NA
 2019442 2019443 SFV_0601 SFV_0602 ybgE cydB FALSE 0.353 128.000 0.100 NA   NA
 2019443 2019444 SFV_0602 SFV_0603 cydB cydA TRUE 0.947 16.000 0.000 0.054 Y NA
 2019444 2019445 SFV_0603 SFV_0604 cydA ybgG FALSE 0.003 850.000 0.000 1.000 N NA
 2019445 1603579 SFV_0604 SFV_0605 ybgG hrsA FALSE 0.526 18.000 0.000 NA   NA
 2019447 2019448 SFV_0607 SFV_0608 sucD sucC TRUE 0.999 0.000 0.806 0.001 Y NA
 2019448 2019449 SFV_0608 SFV_0609 sucC sucB TRUE 0.816 94.000 0.136 1.000 Y NA
 2019449 2019450 SFV_0609 SFV_0610 sucB sucA TRUE 0.992 15.000 0.667 1.000 Y NA
 2019450 2019451 SFV_0610 SFV_0611 sucA sdhB FALSE 0.183 301.000 0.067 1.000 Y NA
 2019451 2019452 SFV_0611 SFV_0612 sdhB sdhA TRUE 0.994 16.000 0.604 0.003 Y NA
 2019452 2019453 SFV_0612 SFV_0613 sdhA sdhD TRUE 0.998 0.000 0.705 0.003 Y NA
 2019453 2019454 SFV_0613 SFV_0614 sdhD sdhC TRUE 0.996 -6.000 0.453 0.001 Y NA
 2019455 2019456 SFV_0615 SFV_0616 gltA ybgD FALSE 0.009 390.000 0.000 1.000 N NA
 2019456 2019457 SFV_0616 SFV_0617 ybgD ybgQ TRUE 0.947 9.000 0.000 1.000 Y NA
 2019457 2019458 SFV_0617 SFV_0618 ybgQ ybgP TRUE 0.923 15.000 0.000 1.000 Y NA
 2019458 2019459 SFV_0618 SFV_0619 ybgP ybgO FALSE 0.015 333.000 0.000 1.000   NA
 2019459 1603594 SFV_0619 SFV_0620 ybgO abrB FALSE 0.113 152.000 0.000 NA   NA
 2019460 2019461 SFV_0621 SFV_0622 nei ybgL FALSE 0.452 36.000 0.037 1.000   NA
 2019461 1603597 SFV_0622 SFV_0623 ybgL ybgK TRUE 0.659 -10.000 0.000 NA   NA
 1603597 2019462 SFV_0623 SFV_0624 ybgK ybgJ TRUE 0.716 -6.000 0.000 NA   NA
 2019462 2019463 SFV_0624 SFV_0625 ybgJ ybgI TRUE 0.575 23.000 0.050 NA   NA
 2019465 2019466 SFV_0627 SFV_0628 phrB ybgA TRUE 0.743 -3.000 0.019 NA   NA
 2019468 2019469 SFV_0630 SFV_0631     TRUE 0.965 19.000 0.600 NA   NA
 2019469 2019470 SFV_0631 SFV_0632   insB FALSE 0.008 397.000 0.000 NA   NA
 2019473 1603610 SFV_0635 SFV_0636 kdpA kdpB FALSE 0.474 23.000 0.000 NA   NA
 1603610 2019474 SFV_0636 SFV_0637 kdpB kdpC TRUE 0.653 9.000 0.000 NA   NA
 2019474 1603612 SFV_0637 SFV_0638 kdpC kdpD FALSE 0.520 -40.000 0.000 NA   NA
 1603612 2019475 SFV_0638 SFV_0639 kdpD kdpE FALSE 0.213 72.000 0.000 NA   NA
 1603615 2019477 SFV_0641 SFV_0642 speF potE TRUE 0.780 -3.000 0.000 NA   NA
 2019478 2019479 SFV_0643 SFV_0644 pgm seqA TRUE 0.746 26.000 0.151 1.000 N NA
 2019480 2019481 SFV_0645 SFV_0646 ybfF ybfE TRUE 0.698 71.000 0.276 NA   NA
 2019481 2019482 SFV_0646 SFV_0647 ybfE fldA TRUE 0.945 23.000 0.473 1.000   NA
 2019482 2019483 SFV_0647 SFV_0648 fldA fur FALSE 0.074 290.000 0.156 1.000 N NA
 2019484 2019485 SFV_0649 SFV_0650 ybfN ybfM FALSE 0.517 19.000 0.000 NA   NA
 2019485 2019486 SFV_0650 SFV_0651 ybfM glnS FALSE 0.006 579.000 0.000 1.000   NA
 2019486 2019487 SFV_0651 SFV_0652 glnS nagE FALSE 0.036 203.000 0.006 1.000 N NA
 2019488 2019489 SFV_0653 SFV_0654 nagB nagA TRUE 0.979 60.000 0.557 0.001 Y NA
 2019489 2019490 SFV_0654 SFV_0655 nagA nagC TRUE 0.994 9.000 0.571 1.000 Y NA
 2019490 2019491 SFV_0655 SFV_0656 nagC nagD TRUE 0.847 48.000 0.070 1.000 Y NA
 2019491 2019492 SFV_0656 SFV_0657 nagD asnB FALSE 0.008 397.000 0.000 1.000 N NA
 2019492 1603632 SFV_0657 SFV_0658 asnB   FALSE 0.009 381.000 0.000 NA   NA
 1603632 1603633 SFV_0658 SFV_0659     TRUE 0.633 10.000 0.000 NA   NA
 1603633 1603634 SFV_0659 SFV_0660     FALSE 0.462 24.000 0.000 NA   NA
 1603634 1603635 SFV_0660 SFV_0661     FALSE 0.381 35.000 0.000 NA   NA
 1603635 1603636 SFV_0661 SFV_0662     TRUE 0.544 16.000 0.000 NA   NA
 1603636 1603637 SFV_0662 SFV_0663     FALSE 0.299 49.000 0.000 NA   NA
 1603637 1603638 SFV_0663 SFV_0664     FALSE 0.356 38.000 0.000 NA   NA
 2019494 2019495 SFV_0666 SFV_0667 yleA ybeZ FALSE 0.448 153.000 0.220 1.000 N NA
 2019495 2019496 SFV_0667 SFV_0668 ybeZ ybeY TRUE 0.984 -3.000 0.457 NA   NA
 2019496 2019497 SFV_0668 SFV_0669 ybeY ybeX FALSE 0.496 90.000 0.150 NA   NA
 2019497 2019498 SFV_0669 SFV_0670 ybeX lnt TRUE 0.949 25.000 0.557 1.000 N NA
 2019498 2019499 SFV_0670 SFV_0671 lnt ybeJ FALSE 0.008 397.000 0.000 1.000 N NA
 2019499 2019500 SFV_0671 SFV_0672 ybeJ gltJ TRUE 0.590 170.000 0.000 0.057 Y NA
 2019500 2019501 SFV_0672 SFV_0673 gltJ gltK TRUE 0.999 0.000 0.933 0.016 Y NA
 2019501 2019502 SFV_0673 SFV_0674 gltK gltL TRUE 0.994 0.000 0.379 1.000 Y NA
 2019502 2019503 SFV_0674 SFV_0675 gltL ybeK TRUE 0.539 118.000 0.195 NA N NA
 2019503 2019504 SFV_0675 SFV_0676 ybeK ybeW FALSE 0.179 84.000 0.000 NA N NA
 2019505 2019506 SFV_0677 SFV_0678 ybeV ybeU TRUE 0.780 -3.000 0.000 NA   NA
 2019508 2019509 SFV_0680 SFV_0681 ybeS ybeR TRUE 0.780 -3.000 0.000 NA   NA
 2019512 2019513 SFV_0684 SFV_0685 leuS rlpB TRUE 0.856 15.000 0.182 NA N NA
 2019513 2019514 SFV_0685 SFV_0686 rlpB holA TRUE 0.949 0.000 0.199 NA N NA
 2019514 2019515 SFV_0686 SFV_0687 holA ybeN TRUE 0.809 2.000 0.045 1.000 N NA
 2019515 2019516 SFV_0687 SFV_0688 ybeN phpB TRUE 0.596 24.000 0.057 1.000 N NA
 2019516 2019517 SFV_0688 SFV_0689 phpB ybeB FALSE 0.026 260.000 0.000 NA   NA
 2019517 2019518 SFV_0689 SFV_0690 ybeB ybeA TRUE 0.961 4.000 0.307 NA   NA
 2019518 2019519 SFV_0690 SFV_0691 ybeA mrdA FALSE 0.415 31.000 0.031 NA   NA
 2019519 2019520 SFV_0691 SFV_0692 mrdA mrdB TRUE 0.799 3.000 0.046 1.000 N NA
 2019520 2019521 SFV_0692 SFV_0693 mrdB rlpA TRUE 0.597 11.000 0.035 NA N NA
 2019521 2019522 SFV_0693 SFV_0694 rlpA dacA TRUE 0.945 67.000 0.475 NA Y NA
 2019522 2019523 SFV_0694 SFV_0695 dacA ybeD FALSE 0.348 111.000 0.081 NA   NA
 2019523 2019524 SFV_0695 SFV_0696 ybeD lipB TRUE 0.615 101.000 0.219 NA   NA
 2019524 2019525 SFV_0696 SFV_0697 lipB ybeF FALSE 0.027 259.000 0.000 1.000 N NA
 2019525 2019526 SFV_0697 SFV_0698 ybeF lipA FALSE 0.026 224.000 0.005 1.000 N NA
 2019527 2019528 SFV_0699 SFV_0700 ybeC ybeM TRUE 0.549 129.000 0.196 1.000   NA
 2019530 2019531 SFV_0702 SFV_0703 cspE crcA TRUE 0.762 91.000 0.333 1.000   NA
 1603679 2019533 SFV_0705 SFV_0706 citB   FALSE 0.009 377.000 0.000 NA   NA
 2019534 2019535 SFV_0707 SFV_0708     FALSE 0.471 62.000 0.000 0.080   NA
 2019535 2019536 SFV_0708 SFV_0709     TRUE 0.782 141.000 0.182 1.000 Y NA
 2019537 2019538 SFV_0710 SFV_0711     TRUE 0.985 12.000 1.000 NA   NA
 2019538 2019539 SFV_0711 SFV_0712     TRUE 0.991 4.000 1.000 NA   NA
 2019539 2019540 SFV_0712 SFV_0713     FALSE 0.004 638.000 0.000 NA   NA
 2019540 2019541 SFV_0713 SFV_0714     TRUE 0.994 0.000 1.000 NA   NA
 2019541 2019542 SFV_0714 SFV_0715     TRUE 0.665 -15.000 0.000 1.000   NA
 2019542 2019543 SFV_0715 SFV_0716     TRUE 0.891 24.000 0.000 1.000 Y NA
 2019543 2019544 SFV_0716 SFV_0717     FALSE 0.243 76.000 0.000 1.000   NA
 2019544 2019545 SFV_0717 SFV_0718     TRUE 0.974 -67.000 1.000 NA   NA
 2019546 2019547 SFV_0719 SFV_0720     FALSE 0.146 301.000 0.000 1.000 Y NA
 2019548 2019549 SFV_0721 SFV_0722     TRUE 0.665 -15.000 0.000 1.000   NA
 2019549 2019550 SFV_0722 SFV_0723     FALSE 0.381 35.000 0.000 NA   NA
 2019550 2019551 SFV_0723 SFV_0724     TRUE 0.901 20.000 0.000 NA Y NA
 2019551 2019552 SFV_0724 SFV_0725     TRUE 0.969 -3.000 0.000 NA Y NA
 2019552 2019553 SFV_0725 SFV_0726   ybcS FALSE 0.314 54.000 0.000 1.000   NA
 2019554 2019555 SFV_0727 SFV_0728     TRUE 0.782 141.000 0.182 1.000 Y NA
 1603703 1603704 SFV_0729 SFV_0730     TRUE 0.713 4.000 0.000 NA   NA
 1603704 1603705 SFV_0730 SFV_0731     TRUE 0.735 3.000 0.000 NA   NA
 1603705 1603706 SFV_0731 SFV_0732     TRUE 0.750 2.000 0.000 NA   NA
 1603706 2019556 SFV_0732 SFV_0733     FALSE 0.003 741.000 0.000 NA   NA
 2019556 2019557 SFV_0733 SFV_0734     TRUE 0.783 0.000 0.000 NA   NA
 2019557 2019558 SFV_0734 SFV_0735     FALSE 0.350 39.000 0.000 NA   NA
 2019558 2019559 SFV_0735 SFV_0736     FALSE 0.004 633.000 0.000 NA   NA
 2019559 2019560 SFV_0736 SFV_0737     FALSE 0.124 148.000 0.000 NA   NA
 2019560 1603712 SFV_0737 SFV_0738     FALSE 0.006 495.000 0.000 NA   NA
 1603712 2019561 SFV_0738 SFV_0739     FALSE 0.127 146.000 0.000 NA   NA
 2019561 2019562 SFV_0739 SFV_0740   ydaT FALSE 0.210 78.000 0.000 NA   NA
 2019562 2019563 SFV_0740 SFV_0741 ydaT   FALSE 0.199 102.000 0.000 NA   NA
 2019565 2019566 SFV_0743 SFV_0744     TRUE 0.905 -42.000 0.000 1.000 Y NA
 2019568 2019569 SFV_0746 SFV_0747     TRUE 0.782 141.000 0.182 1.000 Y NA
 2019573 2019574 SFV_0752 SFV_0753 ybhH ybhI FALSE 0.210 76.000 0.000 NA   NA
 2019574 2019575 SFV_0753 SFV_0754 ybhI ybhJ FALSE 0.439 183.000 0.300 1.000 N NA
 2019576 2019577 SFV_0755 SFV_0756 ybhC ybhB FALSE 0.113 152.000 0.000 NA   NA
 2019577 2019578 SFV_0756 SFV_0758 ybhB bioA FALSE 0.166 59.000 0.003 NA   NA
 2019579 2019580 SFV_0757 SFV_0759 bioB bioF TRUE 0.992 -3.000 0.168 0.002 Y NA
 2019580 2019581 SFV_0759 SFV_0760 bioF bioC TRUE 0.981 -13.000 0.133 0.002 Y NA
 2019581 2019582 SFV_0760 SFV_0761 bioC bioD TRUE 0.980 -7.000 0.054 0.002 Y NA
 2019582 2019583 SFV_0761 SFV_0762 bioD uvrB FALSE 0.012 579.000 0.000 0.086 N NA
 2019585 2019586 SFV_0764 SFV_0765 moaA moaB TRUE 0.961 22.000 0.108 0.003 Y NA
 2019586 2019587 SFV_0765 SFV_0766 moaB moaC TRUE 0.987 3.000 0.109 0.003 Y NA
 2019587 2019588 SFV_0766 SFV_0767 moaC moaD TRUE 0.988 -7.000 0.175 0.003 Y NA
 2019588 2019589 SFV_0767 SFV_0768 moaD moaE TRUE 0.997 2.000 0.501 0.003 Y NA
 2019589 2019590 SFV_0768 SFV_0769 moaE ybhL FALSE 0.145 137.000 0.025 NA   NA
 2019590 2019591 SFV_0769 SFV_0770 ybhL ybhM FALSE 0.062 205.000 0.037 NA   NA
 2019592 2019593 SFV_0771 SFV_0772 ybhN ybhO TRUE 0.880 0.000 0.071 NA   NA
 2019593 2019594 SFV_0772 SFV_0773 ybhO ybhP TRUE 0.976 -3.000 0.333 NA   NA
 1603749 2019596 SFV_0775 SFV_0776 ybhR ybhS TRUE 0.609 11.000 0.000 NA   NA
 2019596 2019597 SFV_0776 SFV_0777 ybhS ybhF TRUE 0.987 -7.000 0.547 0.086   NA
 2019597 2019598 SFV_0777 SFV_0778 ybhF   TRUE 0.982 -7.000 0.545 1.000   NA
 2019598 2019599 SFV_0778 SFV_0779   ybiH TRUE 0.953 3.000 0.236 1.000 N NA
 2019602 2019603 SFV_0781 SFV_0783 dinG ybiB FALSE 0.490 28.000 0.041 1.000 N NA
 2019603 2019604 SFV_0783 SFV_0784 ybiB ybiC FALSE 0.310 141.000 0.000 0.050 N NA
 2019605 2019606 SFV_0785 SFV_0786 ybiJ ybiI FALSE 0.024 265.000 0.027 NA   NA
 2019606 2019607 SFV_0786 SFV_0787 ybiI ybiX FALSE 0.244 74.000 0.000 1.000   NA
 2019607 1603762 SFV_0787 SFV_0789 ybiX   FALSE 0.335 42.000 0.000 NA   NA
 2019611 2019612 SFV_0792 SFV_0793 ybiO glnQ FALSE 0.005 542.000 0.000 1.000 N NA
 2019612 2019613 SFV_0793 SFV_0794 glnQ glnP TRUE 0.973 -3.000 0.038 1.000 Y NA
 2019613 2019614 SFV_0794 SFV_0795 glnP glnH TRUE 0.751 139.000 0.051 0.068 Y NA
 2019614 2019615 SFV_0795 SFV_0796 glnH dps FALSE 0.008 404.000 0.000 1.000 N NA
 2019615 2019616 SFV_0796 SFV_0797 dps ybiF FALSE 0.126 176.000 0.044 1.000   NA
 2019619 2019620 SFV_0800 SFV_0801   ybiR TRUE 0.727 -3.000 0.014 1.000 N NA
 2019623 2019624 SFV_0804 SFV_0805 ybiU   FALSE 0.113 152.000 0.000 NA   NA
 2019624 2019625 SFV_0805 SFV_0806   ybiW FALSE 0.150 146.000 0.000 1.000   NA
 2019625 2019626 SFV_0806 SFV_0807 ybiW ybiY TRUE 0.975 6.000 0.316 0.003 N NA
 2019628 2019629 SFV_0809 SFV_0810 moeB moeA TRUE 0.983 24.000 0.323 0.003 Y NA
 2019630 2019631 SFV_0811 SFV_0812 ybiK   TRUE 0.755 20.000 0.104 1.000   NA
 2019631 2019632 SFV_0812 SFV_0813     TRUE 0.724 20.000 0.083 1.000   NA
 2019632 2019633 SFV_0813 SFV_0814     TRUE 0.995 18.000 0.803 0.056 Y NA
 2019633 1603789 SFV_0814 SFV_0815     FALSE 0.319 45.000 0.000 NA   NA
 1603789 2019634 SFV_0815 SFV_0816     FALSE 0.200 100.000 0.000 NA   NA
 2019634 2019635 SFV_0816 SFV_0817     TRUE 0.946 8.000 0.000 NA Y NA
 2019637 1603794 SFV_0819 SFV_0820   yliI FALSE 0.194 111.000 0.000 NA   NA
 1603796 2019639 SFV_0822 SFV_0823 dacC   FALSE 0.394 -1324.000 0.000 NA   NA
 2019639 2019640 SFV_0823 SFV_0824     TRUE 0.782 141.000 0.182 1.000 Y NA
 2019641 2019642 SFV_0825 SFV_0826 deoR ybjG TRUE 0.726 58.000 0.235 1.000   NA
 2019644 2019645 SFV_0828 SFV_0829 ybjH   FALSE 0.209 92.000 0.000 NA   NA
 2019645 2019646 SFV_0829 SFV_0830     TRUE 0.814 0.000 0.000 1.000   NA
 2019651 2019652 SFV_0835 SFV_0836 ybjC mdaA TRUE 0.863 -16.000 0.159 NA   NA
 2019652 2019653 SFV_0836 SFV_0837 mdaA rimK FALSE 0.249 61.000 0.000 1.000 N NA
 2019653 2019654 SFV_0837 SFV_0838 rimK ybjN FALSE 0.331 76.000 0.065 NA   NA
 2019654 2019655 SFV_0838 SFV_0839 ybjN potF FALSE 0.022 277.000 0.000 NA   NA
 2019655 1603814 SFV_0839 SFV_0840 potF potG TRUE 0.567 14.000 0.000 NA   NA
 1603814 2019656 SFV_0840 SFV_0841 potG potH TRUE 0.633 10.000 0.000 NA   NA
 2019656 2019657 SFV_0841 SFV_0842 potH potI TRUE 0.997 -3.000 0.528 0.056 Y NA
 2019657 2019658 SFV_0842 SFV_0843 potI ybjO TRUE 0.729 60.000 0.264 NA   NA
 2019658 2019659 SFV_0843 SFV_0844 ybjO ybjF TRUE 0.778 41.000 0.226 NA   NA
 2019660 2019661 SFV_0845 SFV_0846 artJ artM FALSE 0.337 292.000 0.143 0.068 Y NA
 2019661 2019662 SFV_0846 SFV_0847 artM artQ TRUE 0.998 0.000 0.714 0.015 Y NA
 2019662 2019663 SFV_0847 SFV_0848 artQ artI TRUE 0.990 7.000 0.260 0.056 Y NA
 2019663 2019664 SFV_0848 SFV_0849 artI artP TRUE 0.978 18.000 0.323 1.000 Y NA
 2019664 2019665 SFV_0849 SFV_0850 artP ybjP FALSE 0.093 218.000 0.081 NA   NA
 2019668 2019669 SFV_0853 SFV_0854     FALSE 0.048 211.000 0.000 NA   NA
 2019669 2019670 SFV_0854 SFV_0855     TRUE 0.780 -3.000 0.000 NA   NA
 2019671 2019672 SFV_0856 SFV_0857   ybjT TRUE 0.838 63.000 0.022 0.003 Y NA
 2019672 2019673 SFV_0857 SFV_0858 ybjT ybjU TRUE 0.766 11.000 0.074 1.000 N NA
 2019673 2019674 SFV_0858 SFV_0859 ybjU poxB TRUE 0.857 37.000 0.041 1.000 Y NA
 2019674 2019675 SFV_0859 SFV_0860 poxB   FALSE 0.156 133.000 0.025 1.000 N NA
 2019675 2019676 SFV_0860 SFV_0861   ybjW TRUE 0.958 12.000 0.000 0.017 Y NA
 2019676 2019677 SFV_0861 SFV_0862 ybjW ybjE FALSE 0.155 144.000 0.000 1.000   NA
 2019677 2019678 SFV_0862 SFV_0863 ybjE aqpZ FALSE 0.008 409.000 0.025 1.000   NA
 2019678 2019679 SFV_0863 SFV_0864 aqpZ insB FALSE 0.289 52.000 0.000 1.000 N NA
 2019680 2019681 SFV_0865 SFV_0866   ybjD FALSE 0.013 329.000 0.000 NA   NA
 2019683 2019684 SFV_0868 SFV_0869     FALSE 0.426 -115.000 0.000 NA   NA
 2019684 1603844 SFV_0869 SFV_0870   ybjZ TRUE 0.780 -3.000 0.000 NA   NA
 2019686 2019687 SFV_0872 SFV_0873 yljA clpA TRUE 0.945 31.000 0.596 NA   NA
 1603848 2019688 SFV_0874 SFV_0875   infA FALSE 0.028 254.000 0.000 NA   NA
 2019688 2019689 SFV_0875 SFV_0876 infA aat FALSE 0.018 285.000 0.020 1.000 N NA
 2019689 2019690 SFV_0876 SFV_0877 aat cydC TRUE 0.849 42.000 0.049 1.000 Y NA
 2019690 2019691 SFV_0877 SFV_0878 cydC cydD TRUE 0.998 1.000 0.631 0.005 Y NA
 2019691 2019692 SFV_0878 SFV_0879 cydD trxB TRUE 0.710 123.000 0.049 1.000 Y NA
 2019693 2019694 SFV_0880 SFV_0881 lrp ftsK TRUE 0.693 135.000 0.345 1.000 N NA
 2019694 2019695 SFV_0881 SFV_0882 ftsK lolA TRUE 0.545 155.000 0.305 1.000 N NA
 2019695 2019696 SFV_0882 SFV_0883 lolA ycaJ TRUE 0.870 11.000 0.167 1.000 N NA
 2019696 2019697 SFV_0883 SFV_0884 ycaJ serS FALSE 0.522 91.000 0.078 0.085 N NA
 2019697 1603859 SFV_0884 SFV_0885 serS dmsA FALSE 0.032 240.000 0.000 NA   NA
 1603859 2019698 SFV_0885 SFV_0886 dmsA dmsB TRUE 0.609 11.000 0.000 NA   NA
 2019698 2019699 SFV_0886 SFV_0887 dmsB dmsC TRUE 0.973 2.000 0.333 1.000   NA
 2019701 2019702 SFV_0889 SFV_0890 ycaD   FALSE 0.016 313.000 0.000 1.000 N NA
 2019702 2019703 SFV_0890 SFV_0891     TRUE 0.780 -3.000 0.000 NA   NA
 2019703 2019704 SFV_0891 SFV_0892     TRUE 0.780 -3.000 0.000 NA   NA
 2019704 2019705 SFV_0892 SFV_0893     TRUE 0.682 6.000 0.000 NA   NA
 2019705 2019706 SFV_0893 SFV_0894     FALSE 0.195 131.000 0.000 1.000   NA
 2019706 2019707 SFV_0894 SFV_0895     TRUE 0.544 16.000 0.000 NA   NA
 2019709 2019710 SFV_0897 SFV_0898 insB ycaN TRUE 0.753 2.000 0.000 1.000 N NA
 2019711 2019712 SFV_0900 SFV_0901     TRUE 0.782 141.000 0.182 1.000 Y NA
 2019713 2019714 SFV_0902 SFV_0903 pflA pflB FALSE 0.149 192.000 0.092 1.000 N NA
 2019714 2019715 SFV_0903 SFV_0904 pflB focA TRUE 0.815 55.000 0.345 1.000 N NA
 2019715 2019716 SFV_0904 SFV_0905 focA ycaO FALSE 0.036 232.000 0.000 NA   NA
 1603880 2019717 SFV_0906 SFV_0907 ycaP serC FALSE 0.058 199.000 0.000 NA   NA
 2019717 2019718 SFV_0907 SFV_0908 serC aroA TRUE 0.728 71.000 0.033 1.000 Y NA
 2019718 2019719 SFV_0908 SFV_0909 aroA   FALSE 0.180 126.000 0.000 1.000 N NA
 2019719 2019720 SFV_0909 SFV_0910   ycaL FALSE 0.196 112.000 0.000 1.000 N NA
 2019720 2019721 SFV_0910 SFV_0911 ycaL cmk FALSE 0.054 173.000 0.004 1.000 N NA
 2019721 2019722 SFV_0911 SFV_0912 cmk rpsA TRUE 0.678 111.000 0.281 1.000 N NA
 2019722 2019723 SFV_0912 SFV_0913 rpsA himD FALSE 0.511 160.000 0.292 1.000 N NA
 2019723 2019724 SFV_0913 SFV_0914 himD ycaI FALSE 0.004 598.000 0.003 1.000   NA
 2019724 2019725 SFV_0914 SFV_0915 ycaI msbA FALSE 0.015 710.000 0.075 0.082   NA
 2019725 2019726 SFV_0915 SFV_0916 msbA ycaH TRUE 0.954 -3.000 0.205 1.000 N NA
 2019726 2019727 SFV_0916 SFV_0917 ycaH ycaQ FALSE 0.306 37.000 0.017 NA   NA
 2019727 2019728 SFV_0917 SFV_0918 ycaQ ycaR FALSE 0.234 52.000 0.016 NA   NA
 2019728 2019729 SFV_0918 SFV_0919 ycaR kdsB TRUE 0.967 -3.000 0.265 NA   NA
 2019729 2019730 SFV_0919 SFV_0920 kdsB   FALSE 0.098 154.000 0.023 NA   NA
 2019732 2019733 SFV_0922 SFV_0923 smtA mukF TRUE 0.973 -3.000 0.325 NA N NA
 2019733 2019734 SFV_0923 SFV_0924 mukF mukE TRUE 0.895 -46.000 0.036 NA Y NA
 2019734 2019735 SFV_0924 SFV_0925 mukE mukB TRUE 0.985 0.000 0.000 0.001 Y NA
 2019735 2019736 SFV_0925 SFV_0926 mukB   FALSE 0.131 145.000 0.000 1.000 N NA
 2019736 2019737 SFV_0926 SFV_0927   ycbB FALSE 0.062 208.000 0.000 1.000   NA
 2019737 2019738 SFV_0927 SFV_0928 ycbB ycbK FALSE 0.524 182.000 0.372 NA   NA
 2019738 2019739 SFV_0928 SFV_0929 ycbK ycbL TRUE 0.648 27.000 0.089 NA   NA
 2019740 2019741 SFV_0930 SFV_0931 aspC ompF FALSE 0.083 185.000 0.036 1.000 N NA
 2019741 2019742 SFV_0931 SFV_0932 ompF asnS FALSE 0.004 601.000 0.000 1.000 N NA
 2019742 2019743 SFV_0932 SFV_0933 asnS pncB FALSE 0.101 169.000 0.034 1.000 N NA
 2019745 2019746 SFV_0935 SFV_0936 ycbE ycbM TRUE 0.996 -3.000 0.472 1.000 Y NA
 2019746 2019747 SFV_0936 SFV_0937 ycbM   TRUE 0.576 -25.000 0.000 1.000 N NA
 2019747 2019748 SFV_0937 SFV_0938     TRUE 0.891 24.000 0.000 1.000 Y NA
 2019748 2019749 SFV_0938 SFV_0939   ycbN FALSE 0.022 283.000 0.000 1.000 N NA
 2019749 2019750 SFV_0939 SFV_0940 ycbN ycbO TRUE 0.977 -3.000 0.341 1.000 N NA
 2019750 2019751 SFV_0940 SFV_0941 ycbO ycbP TRUE 0.806 -49.000 0.169 1.000   NA
 2019751 2019752 SFV_0941 SFV_0942 ycbP   FALSE 0.438 -81.000 0.000 NA   NA
 2019753 2019754 SFV_0943 SFV_0944 insB   FALSE 0.020 289.000 0.000 1.000 N NA
 2019755 2019756 SFV_0945 SFV_0946 insB insB TRUE 0.616 37.000 0.000 0.078   NA
 2019757 2019758 SFV_0947 SFV_0948   ycbR FALSE 0.090 169.000 0.000 NA   NA
 2019758 2019759 SFV_0948 SFV_0949 ycbR ycbS TRUE 0.988 25.000 0.667 1.000 Y NA
 2019759 2019760 SFV_0949 SFV_0950 ycbS   TRUE 0.783 54.000 0.000 1.000 Y NA
 2019760 2019761 SFV_0950 SFV_0951     TRUE 0.807 98.000 0.000 0.007 Y NA
 2019761 2019762 SFV_0951 SFV_0952     TRUE 0.997 8.000 0.667 0.007 Y NA
 2019762 2019763 SFV_0952 SFV_0953   ycbF TRUE 0.987 -34.000 0.500 1.000 Y NA
 2019763 2019764 SFV_0953 SFV_0954 ycbF pyrD FALSE 0.197 111.000 0.000 1.000 N NA
 2019764 2019765 SFV_0954 SFV_0955 pyrD ycbW FALSE 0.287 138.000 0.081 NA   NA
 2019767 2019768 SFV_0957 SFV_0958 ycbY uup TRUE 0.750 12.000 0.061 1.000   NA
 2019768 2019769 SFV_0958 SFV_0959 uup pqiA FALSE 0.248 130.000 0.054 NA   NA
 2019769 2019770 SFV_0959 SFV_0960 pqiA pqiB TRUE 0.988 5.000 0.819 NA   NA
 2019770 2019771 SFV_0960 SFV_0961 pqiB ymbA TRUE 0.987 -3.000 0.531 NA   NA
 2019772 2019773 SFV_0962 SFV_0963 fabA   TRUE 0.719 69.000 0.290 1.000 N NA
 2019775 2019776 SFV_0965 SFV_0966 ompA sulA FALSE 0.011 356.000 0.000 1.000 N NA
 1603941 2019777 SFV_0967 SFV_0968     FALSE 0.407 -866.000 0.000 NA   NA
 2019777 2019778 SFV_0968 SFV_0969     TRUE 0.891 24.000 0.000 1.000 Y NA
 2019779 2019780 SFV_0970 SFV_0971   yccF TRUE 0.807 10.000 0.090 NA   NA
 2019782 2019783 SFV_0973 SFV_0974 mgsA   FALSE 0.307 87.000 0.055 NA   NA
 2019785 2019786 SFV_0976 SFV_0977 yccV   TRUE 0.838 7.000 0.094 NA   NA
 2019786 2019787 SFV_0977 SFV_0978   yccK FALSE 0.011 385.000 0.000 1.000   NA
 2019787 2019788 SFV_0978 SFV_0979 yccK yccA TRUE 0.706 34.000 0.140 1.000   NA
 2019788 1603954 SFV_0979 SFV_0980 yccA   FALSE 0.052 207.000 0.000 NA   NA
 2019789 2019790 SFV_0981 SFV_0982 hyaA hyaB TRUE 0.985 -3.000 0.000 0.001 Y NA
 2019790 2019791 SFV_0982 SFV_0983 hyaB hyaC TRUE 0.986 19.000 0.355 0.053 Y NA
 2019791 2019792 SFV_0983 SFV_0984 hyaC hyaD TRUE 0.987 -3.000 0.177 1.000 Y NA
 2019792 2019793 SFV_0984 SFV_0985 hyaD hyaE TRUE 0.900 -3.000 0.096 NA   NA
 2019793 2019794 SFV_0985 SFV_0986 hyaE hyaF TRUE 0.992 -3.000 0.769 NA   NA
 2019794 2019795 SFV_0986 SFV_0987 hyaF appC FALSE 0.282 134.000 0.061 1.000   NA
 2019795 2019796 SFV_0987 SFV_0988 appC appB TRUE 0.977 12.000 0.158 0.053 Y NA
 2019796 2019797 SFV_0988 SFV_0989 appB appA FALSE 0.087 184.000 0.000 1.000   NA
 2019798 2019799 SFV_0990 SFV_0991 yccC yccY TRUE 0.979 20.000 1.000 1.000 N NA
 2019799 2019800 SFV_0991 SFV_0992 yccY yccZ TRUE 0.979 -24.000 0.750 1.000 N NA
 2019800 2019801 SFV_0992 SFV_0993 yccZ ymcA FALSE 0.448 25.000 0.000 NA   NA
 2019801 2019802 SFV_0993 SFV_0994 ymcA ymcB TRUE 0.866 0.000 0.060 NA   NA
 2019802 2019803 SFV_0994 SFV_0995 ymcB ymcC TRUE 0.989 -3.000 0.600 NA   NA
 2019803 2019804 SFV_0995 SFV_0996 ymcC ymcD FALSE 0.197 107.000 0.000 NA   NA
 2019804 2019805 SFV_0996 SFV_0997 ymcD cspH FALSE 0.007 424.000 0.000 NA   NA
 2019805 2019806 SFV_0997 SFV_0998 cspH   FALSE 0.032 241.000 0.000 NA   NA
 2019807 2019808 SFV_0999 SFV_1000 insB cspG FALSE 0.488 22.000 0.000 1.000 N NA
 2019808 2019809 SFV_1000 SFV_1001 cspG gnsA FALSE 0.008 394.000 0.000 NA   NA
 2019810 2019811 SFV_1002 SFV_1004 yccM torS FALSE 0.202 102.000 0.000 1.000 N NA
 2019814 2019815 SFV_1006 SFV_1007 torC torA TRUE 0.982 0.000 0.000 0.052 Y NA
 2019815 1603982 SFV_1007 SFV_1008 torA torD TRUE 0.780 -3.000 0.000 NA   NA
 2019818 2019819 SFV_1011 SFV_1012 yccD cbpA TRUE 0.987 0.000 0.512 NA   NA
 2019820 2019821 SFV_1013 SFV_1014 yccE agp FALSE 0.019 293.000 0.000 NA   NA
 2019822 2019823 SFV_1015 SFV_1016 yccJ wrbA TRUE 0.900 21.000 0.290 NA   NA
 2019825 2019826 SFV_1018 SFV_1019 ycdG   TRUE 0.957 21.000 0.533 1.000   NA
 2019826 2019827 SFV_1019 SFV_1020     TRUE 0.986 11.000 0.625 0.030   NA
 2019827 2019828 SFV_1020 SFV_1021     TRUE 0.936 10.000 0.256 1.000   NA
 2019828 2019829 SFV_1021 SFV_1022     TRUE 0.962 8.000 0.365 NA   NA
 2019829 2019830 SFV_1022 SFV_1023     TRUE 0.957 12.000 0.442 NA N NA
 2019830 2019831 SFV_1023 SFV_1024     TRUE 0.989 -3.000 0.621 NA N NA
 2019833 2019834 SFV_1026 SFV_1027     FALSE 0.223 114.000 0.000 1.000   NA
 2019835 2019836 SFV_1028 SFV_1029   ycdO TRUE 0.813 58.000 0.356 NA   NA
 2019836 2019837 SFV_1029 SFV_1030 ycdO ycdB TRUE 0.990 6.000 0.378 NA Y NA
 2019837 1604005 SFV_1030 SFV_1031 ycdB phoH FALSE 0.013 333.000 0.000 NA   NA
 2019838 2019839 SFV_1032 SFV_1033 ycdP ycdQ TRUE 0.981 2.000 0.462 NA   NA
 2019839 1604008 SFV_1033 SFV_1035 ycdQ ycdR TRUE 0.695 -7.000 0.000 NA   NA
 1604008 2019840 SFV_1035 SFV_1034 ycdR insB FALSE 0.392 -1487.000 0.000 NA   NA
 2019840 1604010 SFV_1034 SFV_1036 insB ycdS FALSE 0.003 1041.000 0.000 NA   NA
 2019841 2019842 SFV_1037 SFV_1038     FALSE 0.201 98.000 0.000 NA   NA
 2019843 2019844 SFV_1039 SFV_1040     TRUE 0.811 -3.000 0.000 1.000   NA
 2019845 2019846 SFV_1041 SFV_1042   ycdU FALSE 0.196 109.000 0.000 NA   NA
 1604018 2019847 SFV_1044 SFV_1045 ycdW ycdX FALSE 0.269 55.000 0.000 NA   NA
 2019847 2019848 SFV_1045 SFV_1046 ycdX ycdY TRUE 0.932 24.000 0.417 1.000   NA
 2019848 2019849 SFV_1046 SFV_1047 ycdY ycdZ TRUE 0.575 54.000 0.145 NA   NA
 1604022 2019850 SFV_1048 SFV_1049 csgG csgF FALSE 0.432 27.000 0.000 NA   NA
 2019850 2019851 SFV_1049 SFV_1050 csgF csgE TRUE 0.963 25.000 0.723 NA   NA
 2019851 2019852 SFV_1050 SFV_1051 csgE csgD TRUE 0.911 5.000 0.176 NA   NA
 2019853 1604027 SFV_1052 SFV_1053 csgB csgA FALSE 0.340 41.000 0.000 NA   NA
 1604027 2019854 SFV_1053 SFV_1054 csgA   FALSE 0.419 -475.000 0.000 NA   NA
 2019854 2019855 SFV_1054 SFV_1055     TRUE 0.610 141.000 0.000 1.000 Y NA
 2019855 2019856 SFV_1055 SFV_1056     FALSE 0.004 858.000 0.000 1.000   NA
 2019856 2019857 SFV_1056 SFV_1057     FALSE 0.202 95.000 0.028 NA   NA
 2019857 1604032 SFV_1057 SFV_1058   ymdC TRUE 0.695 -7.000 0.000 NA   NA
 2019859 2019860 SFV_1060 SFV_1061 mdoG mdoH TRUE 0.976 -7.000 0.469 1.000 N NA
 2019861 2019862 SFV_1062 SFV_1063     FALSE 0.223 114.000 0.000 1.000   NA
 2019864 2019865 SFV_1065 SFV_1066     FALSE 0.254 236.000 0.000 1.000 Y NA
 2019866 2019867 SFV_1067 SFV_1068     FALSE 0.146 301.000 0.000 1.000 Y NA
 2019867 2019868 SFV_1068 SFV_1069     FALSE 0.045 573.000 0.000 1.000 Y NA
 2019868 2019869 SFV_1069 SFV_1070     TRUE 0.905 -42.000 0.000 1.000 Y NA
 2019869 2019870 SFV_1070 SFV_1071     FALSE 0.010 396.000 0.000 1.000   NA
 2019870 2019871 SFV_1071 SFV_1072     FALSE 0.041 236.000 0.000 1.000   NA
 2019871 2019872 SFV_1072 SFV_1073     FALSE 0.470 -219.000 0.000 1.000   NA
 2019872 2019873 SFV_1073 SFV_1074     FALSE 0.025 288.000 0.000 1.000   NA
 2019873 2019874 SFV_1074 SFV_1075     TRUE 0.782 141.000 0.182 1.000 Y NA
 2019875 2019876 SFV_1076 SFV_1077   htrB FALSE 0.009 387.000 0.000 1.000 N NA
 2019878 2019879 SFV_1079 SFV_1080 yceI   TRUE 0.988 4.000 0.676 1.000   NA
 2019879 2019880 SFV_1080 SFV_1081   yceO FALSE 0.071 186.000 0.000 NA   NA
 2019880 2019881 SFV_1081 SFV_1082 yceO solA TRUE 0.891 21.000 0.269 NA   NA
 2019881 2019882 SFV_1082 SFV_1083 solA dinI FALSE 0.004 659.000 0.000 NA   NA
 2019882 2019883 SFV_1083 SFV_1084 dinI pyrC FALSE 0.217 74.000 0.031 NA   NA
 2019883 2019884 SFV_1084 SFV_1085 pyrC yceB FALSE 0.175 106.000 0.022 NA   NA
 2019884 2019885 SFV_1085 SFV_1086 yceB grxB FALSE 0.364 77.000 0.078 NA   NA
 2019885 2019886 SFV_1086 SFV_1087 grxB yceL FALSE 0.452 64.000 0.103 1.000 N NA
 2019887 2019888 SFV_1088 SFV_1089 rimJ yceH TRUE 0.820 11.000 0.116 NA   NA
 2019888 2019889 SFV_1089 SFV_1090 yceH mviM TRUE 0.889 2.000 0.103 NA   NA
 2019889 2019890 SFV_1090 SFV_1091 mviM mviN FALSE 0.099 167.000 0.022 1.000   NA
 2019891 2019892 SFV_1092 SFV_1093 flgN flgM TRUE 0.995 5.000 0.361 0.002 Y NA
 2019892 2019893 SFV_1093 SFV_1094 flgM flgA TRUE 0.912 76.000 0.330 NA Y NA
 2019894 1604070 SFV_1095 SFV_1096 flgB flgC TRUE 0.713 4.000 0.000 NA   NA
 1604070 2019895 SFV_1096 SFV_1097 flgC flgD TRUE 0.633 10.000 0.000 NA   NA
 2019895 2019896 SFV_1097 SFV_1098 flgD flgE TRUE 0.923 25.000 0.116 NA Y NA
 2019896 2019897 SFV_1098 SFV_1099 flgE flgF TRUE 0.991 20.000 0.476 0.003 Y NA
 2019897 2019898 SFV_1099 SFV_1100 flgF flgG TRUE 0.946 138.000 0.420 0.001 Y NA
 2019898 2019899 SFV_1100 SFV_1101 flgG flgH TRUE 0.963 44.000 0.268 0.004 Y NA
 2019899 2019900 SFV_1101 SFV_1102 flgH flgI TRUE 0.970 12.000 0.073 0.005 Y NA
 2019900 2019901 SFV_1102 SFV_1103 flgI flgJ TRUE 0.985 0.000 0.036 0.005 Y NA
 2019901 1604078 SFV_1103 SFV_1104 flgJ flgK FALSE 0.226 66.000 0.000 NA   NA
 1604078 2019902 SFV_1104 SFV_1105 flgK flgL TRUE 0.592 12.000 0.000 NA   NA
 2019906 2019907 SFV_1109 SFV_1110 yceD plsX FALSE 0.014 360.000 0.044 NA   NA
 2019907 2019908 SFV_1110 SFV_1111 plsX fabH TRUE 0.958 68.000 0.380 0.004 Y NA
 2019908 2019909 SFV_1111 SFV_1112 fabH fabD TRUE 0.978 16.000 0.182 0.004 Y NA
 2019909 2019910 SFV_1112 SFV_1113 fabD fabG TRUE 0.992 13.000 0.432 0.004 Y NA
 2019910 2019911 SFV_1113 SFV_1114 fabG acpP TRUE 0.769 211.000 0.321 0.004 Y NA
 2019911 2019912 SFV_1114 SFV_1115 acpP fabF TRUE 0.923 86.000 0.346 1.000 Y NA
 2019912 2019913 SFV_1115 SFV_1116 fabF pabC TRUE 0.546 120.000 0.187 1.000 N NA
 2019913 2019914 SFV_1116 SFV_1117 pabC yceG TRUE 0.941 3.000 0.204 NA   NA
 2019914 2019915 SFV_1117 SFV_1118 yceG tmk TRUE 0.920 -10.000 0.209 NA   NA
 2019915 2019916 SFV_1118 SFV_1119 tmk holB TRUE 0.956 -3.000 0.211 1.000 N NA
 2019916 2019917 SFV_1119 SFV_1120 holB ycfH TRUE 0.957 11.000 0.110 NA Y NA
 2019917 2019918 SFV_1120 SFV_1121 ycfH ptsG FALSE 0.008 295.000 0.004 NA N NA
 2019920 2019921 SFV_1123 SFV_1124 ycfF ycfL TRUE 0.811 3.000 0.051 NA   NA
 2019921 2019922 SFV_1124 SFV_1125 ycfL ycfM TRUE 0.962 15.000 0.516 NA   NA
 2019922 2019923 SFV_1125 SFV_1126 ycfM ycfN TRUE 0.842 40.000 0.310 NA   NA
 2019923 2019924 SFV_1126 SFV_1127 ycfN ycfO TRUE 0.642 23.000 0.069 1.000 N NA
 2019924 2019925 SFV_1127 SFV_1128 ycfO ycfP TRUE 0.687 23.000 0.091 NA   NA
 2019925 2019926 SFV_1128 SFV_1129 ycfP ndh FALSE 0.012 432.000 0.057 NA   NA
 2019926 2019927 SFV_1129 SFV_1130 ndh ycfJ FALSE 0.072 239.000 0.071 1.000   NA
 2019930 2019931 SFV_1133 SFV_1134 ycfS mfd FALSE 0.125 140.000 0.006 1.000   NA
 2019931 2019932 SFV_1134 SFV_1135 mfd ycfT FALSE 0.191 65.000 0.003 1.000   NA
 2019933 2019934 SFV_1136 SFV_1137 ycfU ycfV TRUE 0.937 8.000 0.175 0.066 N NA
 2019934 2019935 SFV_1137 SFV_1138 ycfV ycfW TRUE 0.953 0.000 0.125 0.066 N NA
 2019935 2019936 SFV_1138 SFV_1139 ycfW ycfX TRUE 0.828 29.000 0.225 1.000 N NA
 2019936 2019937 SFV_1139 SFV_1140 ycfX cobB TRUE 0.950 16.000 0.119 1.000 Y NA
 2019938 2019939 SFV_1141 SFV_1142 potD potC TRUE 0.981 -3.000 0.000 0.054 Y NA
 2019939 2019940 SFV_1142 SFV_1143 potC potB TRUE 0.995 -3.000 0.286 0.054 Y NA
 2019940 2019941 SFV_1143 SFV_1144 potB potA TRUE 0.995 -16.000 0.789 1.000 Y NA
 2019944 2019945 SFV_1147 SFV_1148     FALSE 0.004 621.000 0.000 NA   NA
 2019945 2019946 SFV_1148 SFV_1149     FALSE 0.003 874.000 0.000 NA   NA
 2019946 2019947 SFV_1149 SFV_1150     TRUE 0.780 -3.000 0.000 NA   NA
 2019947 2019948 SFV_1150 SFV_1151     FALSE 0.005 564.000 0.000 NA   NA
 2019948 2019949 SFV_1151 SFV_1152     TRUE 0.633 10.000 0.000 NA   NA
 2019949 2019950 SFV_1152 SFV_1153     FALSE 0.235 64.000 0.000 NA   NA
 2019952 1604130 SFV_1155 SFV_1156     TRUE 0.535 17.000 0.000 NA   NA
 1604130 2019953 SFV_1156 SFV_1157     FALSE 0.269 55.000 0.000 NA   NA
 2019953 2019954 SFV_1157 SFV_1158     TRUE 0.859 2.000 0.071 NA   NA
 2019954 2019955 SFV_1158 SFV_1159     FALSE 0.013 332.000 0.000 NA   NA
 2019955 2019956 SFV_1159 SFV_1160     FALSE 0.004 677.000 0.000 NA   NA
 2019956 2019957 SFV_1160 SFV_1161     TRUE 0.963 -16.000 0.444 NA   NA
 2019957 2019958 SFV_1161 SFV_1162     TRUE 0.567 14.000 0.000 NA   NA
 2019959 2019960 SFV_1163 SFV_1164   phoQ FALSE 0.016 314.000 0.000 NA   NA
 2019960 2019961 SFV_1164 SFV_1165 phoQ phoP TRUE 0.998 0.000 0.940 1.000 Y NA
 2019961 2019962 SFV_1165 SFV_1166 phoP purB FALSE 0.065 169.000 0.011 1.000 N NA
 2019962 2019963 SFV_1166 SFV_1167 purB ycfC TRUE 0.861 4.000 0.093 NA   NA
 2019963 2019964 SFV_1167 SFV_1168 ycfC ycfB TRUE 0.734 36.000 0.180 NA   NA
 2019964 2019965 SFV_1168 SFV_1169 ycfB   TRUE 0.604 54.000 0.158 1.000 N NA
 2019965 2019966 SFV_1169 SFV_1170   ymfC TRUE 0.898 10.000 0.182 1.000 N NA
 2019969 2019970 SFV_1173 SFV_1174     FALSE 0.007 424.000 0.000 NA   NA
 2019971 2019972 SFV_1175 SFV_1176     TRUE 0.633 10.000 0.000 NA   NA
 2019974 2019975 SFV_1178 SFV_1179 minE minD TRUE 0.995 4.000 0.618 NA Y NA
 2019975 2019976 SFV_1179 SFV_1180 minD minC TRUE 0.982 24.000 0.466 1.000 Y NA
 2019976 2019977 SFV_1180 SFV_1181 minC   FALSE 0.003 740.000 0.000 1.000 N NA
 2019977 2019978 SFV_1181 SFV_1182     TRUE 0.905 -42.000 0.000 1.000 Y NA
 2019978 2019979 SFV_1182 SFV_1183     FALSE 0.010 364.000 0.000 NA   NA
 2019980 2019981 SFV_1184 SFV_1185     TRUE 0.811 -3.000 0.000 1.000   NA
 2019981 2019982 SFV_1185 SFV_1186   ycgL FALSE 0.011 358.000 0.000 NA   NA
 2019982 2019983 SFV_1186 SFV_1187 ycgL   FALSE 0.314 72.000 0.056 NA   NA
 2019983 2019984 SFV_1187 SFV_1188   ycgN FALSE 0.388 92.000 0.088 NA   NA
 2019985 2019986 SFV_1190 SFV_1191 umuD umuC TRUE 0.786 0.000 0.000 1.000 N NA
 2019987 2019988 SFV_1192 SFV_1193 dsbB nhaB TRUE 0.825 146.000 0.723 1.000 N NA
 2019991 2019992 SFV_1196 SFV_1197 dadA dadX TRUE 0.882 10.000 0.168 1.000 N NA
 2019993 2019994 SFV_1198 SFV_1199 ipaH   FALSE 0.004 727.000 0.000 NA   NA
 2019994 2019995 SFV_1199 SFV_1201     FALSE 0.385 95.000 0.103 NA N NA
 1604178 2019999 SFV_1204 SFV_1205 prrA modD TRUE 0.693 5.000 0.000 NA   NA
 2019999 2020000 SFV_1205 SFV_1206 modD   TRUE 0.973 0.000 0.034 1.000 Y NA
 2020000 2020001 SFV_1206 SFV_1207     TRUE 0.793 115.000 0.123 1.000 Y NA
 2020001 2020002 SFV_1207 SFV_1208     TRUE 0.998 -3.000 0.862 1.000 Y NA
 2020002 2020003 SFV_1208 SFV_1209     TRUE 0.995 0.000 0.422 1.000 Y NA
 2020005 2020006 SFV_1211 SFV_1212 treA ycgC FALSE 0.018 320.000 0.000 1.000   NA
 2020006 2020007 SFV_1212 SFV_1213 ycgC   FALSE 0.466 80.000 0.118 1.000   NA
 2020007 2020008 SFV_1213 SFV_1214     TRUE 0.987 11.000 0.226 0.001 Y NA
 2020010 2020011 SFV_1216 SFV_1217   ychF FALSE 0.003 844.000 0.000 1.000 N NA
 2020011 2020012 SFV_1217 SFV_1218 ychF pth TRUE 0.841 117.000 0.184 1.000 Y NA
 2020014 2020015 SFV_1220 SFV_1221 ychM prsA FALSE 0.112 152.000 0.027 1.000 N NA
 2020015 2020016 SFV_1221 SFV_1222 prsA ychB FALSE 0.300 85.000 0.053 1.000 N NA
 2020016 2020017 SFV_1222 SFV_1223 ychB hemM TRUE 0.935 0.000 0.157 1.000 N NA
 2020018 2020019 SFV_1224 SFV_1225 hemA prfA TRUE 0.797 42.000 0.171 0.043 N NA
 2020019 2020020 SFV_1225 SFV_1226 prfA hemK TRUE 0.994 0.000 0.229 0.043 Y NA
 2020020 2020021 SFV_1226 SFV_1227 hemK   TRUE 0.909 -3.000 0.109 NA   NA
 2020021 2020022 SFV_1227 SFV_1228   ychA TRUE 0.932 4.000 0.195 NA   NA
 2020022 2020023 SFV_1228 SFV_1229 ychA kdsA TRUE 0.617 36.000 0.089 1.000   NA
 2020024 2020025 SFV_1230 SFV_1231     FALSE 0.008 402.000 0.000 NA   NA
 2020025 2020026 SFV_1231 SFV_1232   chaA FALSE 0.009 378.000 0.000 NA   NA
 2020027 2020028 SFV_1233 SFV_1234 chaB chaC FALSE 0.383 137.000 0.140 NA   NA
 2020031 2020032 SFV_1237 SFV_1238 narL narX TRUE 0.996 -7.000 0.521 0.013 Y NA
 2020033 2020034 SFV_1239 SFV_1240 narK narG FALSE 0.009 393.000 0.000 1.000 N NA
 2020034 2020035 SFV_1240 SFV_1241 narG narH TRUE 0.997 -3.000 0.471 0.001 Y NA
 2020035 2020036 SFV_1241 SFV_1242 narH narJ TRUE 0.998 -3.000 0.588 0.003 Y NA
 2020036 2020037 SFV_1242 SFV_1243 narJ narI TRUE 0.998 0.000 0.500 0.003 Y NA
 1604218 2020038 SFV_1244 SFV_1245   purU FALSE 0.101 160.000 0.000 NA   NA
 2020038 2020039 SFV_1245 SFV_1246 purU ychJ TRUE 0.702 50.000 0.200 NA   NA
 2020040 2020041 SFV_1247 SFV_1248 ychK hnr FALSE 0.308 92.000 0.048 1.000   NA
 2020041 2020042 SFV_1248 SFV_1249 hnr galU FALSE 0.297 202.000 0.235 1.000 N NA
 2020045 2020046 SFV_1252 SFV_1253   adhE FALSE 0.199 108.000 0.000 1.000 N NA
 2020047 2020048 SFV_1254 SFV_1255 ychE oppA FALSE 0.003 738.000 0.000 NA N NA
 2020048 2020049 SFV_1255 SFV_1256 oppA oppB TRUE 0.880 86.000 0.151 0.053 Y NA
 2020049 2020050 SFV_1256 SFV_1257 oppB oppC TRUE 0.996 15.000 0.870 0.053 Y NA
 2020050 2020051 SFV_1257 SFV_1258 oppC oppD TRUE 0.991 12.000 0.554 1.000 Y NA
 2020051 2020052 SFV_1258 SFV_1259 oppD oppF TRUE 0.997 -3.000 0.420 0.002 Y NA
 2020053 2020054 SFV_1260 SFV_1261   cls TRUE 0.866 -43.000 0.231 NA   NA
 2020054 2020055 SFV_1261 SFV_1262 cls kch FALSE 0.007 455.000 0.000 1.000 N NA
 2020056 2020057 SFV_1263 SFV_1264     TRUE 0.782 141.000 0.182 1.000 Y NA
 2020060 2020061 SFV_1267 SFV_1268 yciA yciB FALSE 0.487 105.000 0.167 NA N NA
 2020061 2020062 SFV_1268 SFV_1269 yciB yciC TRUE 0.558 30.000 0.061 NA   NA
 2020064 2020065 SFV_1271 SFV_1272 yciE yciF TRUE 0.778 46.000 0.115 0.001   NA
 2020065 2020066 SFV_1272 SFV_1273 yciF yciG FALSE 0.212 86.000 0.000 NA   NA
 2020066 2020067 SFV_1273 SFV_1274 yciG trpA FALSE 0.014 324.000 0.000 NA   NA
 2020067 2020068 SFV_1274 SFV_1275 trpA trpB TRUE 0.999 0.000 0.947 0.001 Y NA
 2020068 2020069 SFV_1275 SFV_1276 trpB trpC TRUE 0.986 12.000 0.221 0.001 Y NA
 2020069 2020070 SFV_1276 SFV_1277 trpC trpD TRUE 0.991 1.000 0.293 1.000 Y NA
 2020070 2020071 SFV_1277 SFV_1278 trpD trpE TRUE 0.984 0.000 0.010 0.001 Y NA
 2020072 2020073 SFV_1279 SFV_1280 yciV yciO TRUE 0.905 -39.000 0.281 NA   NA
 2020073 2020074 SFV_1280 SFV_1281 yciO yciL TRUE 0.753 101.000 0.075 NA Y NA
 2020075 2020076 SFV_1282 SFV_1283 btuR yciK TRUE 0.843 -3.000 0.050 1.000 N NA
 2020077 2020078 SFV_1284 SFV_1285 sohB topA FALSE 0.003 625.000 0.006 1.000 N NA
 2020078 2020079 SFV_1285 SFV_1286 topA cysB FALSE 0.033 210.000 0.008 1.000 N NA
 2020079 2020080 SFV_1286 SFV_1287 cysB   FALSE 0.019 295.000 0.000 NA   NA
 2020080 2020081 SFV_1287 SFV_1288     TRUE 0.983 4.000 0.556 NA   NA
 2020081 2020082 SFV_1288 SFV_1289   acnA FALSE 0.010 373.000 0.000 NA   NA
 2020084 2020085 SFV_1291 SFV_1292 pgpB yciS FALSE 0.324 149.000 0.143 NA   NA
 2020085 2020086 SFV_1292 SFV_1293 yciS yciM TRUE 0.888 61.000 0.576 NA   NA
 2020086 2020087 SFV_1293 SFV_1294 yciM pyrF FALSE 0.179 193.000 0.125 1.000 N NA
 2020087 2020088 SFV_1294 SFV_1295 pyrF yciH TRUE 0.837 0.000 0.045 1.000 N NA
 2020089 2020090 SFV_1296 SFV_1297 osmB   FALSE 0.024 269.000 0.000 NA   NA
 2020090 2020091 SFV_1297 SFV_1298     FALSE 0.490 90.000 0.146 NA   NA
 2020091 1604273 SFV_1298 SFV_1299   yciR FALSE 0.124 148.000 0.000 NA   NA
 1604273 2020092 SFV_1299 SFV_1300 yciR rnb FALSE 0.036 234.000 0.000 NA   NA
 2020092 2020093 SFV_1300 SFV_1301 rnb yciW FALSE 0.435 68.000 0.105 NA   NA
 2020093 2020094 SFV_1301 SFV_1302 yciW fabI FALSE 0.206 144.000 0.057 NA   NA
 2020094 2020095 SFV_1302 SFV_1303 fabI ycjD FALSE 0.012 368.000 0.000 1.000   NA
 2020095 2020096 SFV_1303 SFV_1304 ycjD sapF FALSE 0.248 71.000 0.000 1.000   NA
 2020096 2020097 SFV_1304 SFV_1305 sapF sapD TRUE 0.998 2.000 0.684 0.015 Y NA
 2020097 2020098 SFV_1305 SFV_1306 sapD sapC TRUE 0.997 0.000 0.667 1.000 Y NA
 2020098 2020099 SFV_1306 SFV_1307 sapC sapB TRUE 0.989 -13.000 0.284 0.053 Y NA
 2020099 2020100 SFV_1307 SFV_1308 sapB sapA TRUE 0.979 -3.000 0.264 0.053 N NA
 2020100 2020101 SFV_1308 SFV_1309 sapA ymjA FALSE 0.016 313.000 0.000 NA   NA
 2020101 2020102 SFV_1309 SFV_1310 ymjA ycjJ FALSE 0.160 134.000 0.000 NA   NA
 2020102 2020103 SFV_1310 SFV_1311 ycjJ   FALSE 0.141 303.000 0.000 1.000 Y NA
 2020104 2020105 SFV_1312 SFV_1313 ycjL ycjC FALSE 0.082 197.000 0.046 NA   NA
 2020105 2020106 SFV_1313 SFV_1314 ycjC aldH FALSE 0.123 150.000 0.040 NA N NA
 2020106 2020107 SFV_1314 SFV_1315 aldH ordL TRUE 0.989 2.000 0.500 0.029 N NA
 2020107 2020108 SFV_1315 SFV_1316 ordL goaG TRUE 0.891 38.000 0.100 1.000 Y NA
 2020110 2020111 SFV_1318 SFV_1319 pspA pspB TRUE 0.925 54.000 0.739 NA   NA
 2020111 2020112 SFV_1319 SFV_1320 pspB pspC TRUE 0.994 0.000 0.913 NA   NA
 2020112 2020113 SFV_1320 SFV_1321 pspC pspD TRUE 0.937 -3.000 0.167 NA   NA
 2020113 2020114 SFV_1321 SFV_1322 pspD pspE TRUE 0.617 43.000 0.133 NA   NA
 2020114 1604297 SFV_1322 SFV_1323 pspE ycjM FALSE 0.072 185.000 0.000 NA   NA
 1604297 2020115 SFV_1323 SFV_1324 ycjM insB FALSE 0.401 -1105.000 0.000 NA   NA
 2020115 1604299 SFV_1324 SFV_1326 insB   FALSE 0.004 614.000 0.000 NA   NA
 1604299 2020116 SFV_1326 SFV_1327   ycjO FALSE 0.495 21.000 0.000 NA   NA
 2020116 2020117 SFV_1327 SFV_1328 ycjO ycjP TRUE 0.997 -13.000 0.805 0.053 Y NA
 2020117 2020118 SFV_1328 SFV_1329 ycjP ycjQ TRUE 0.799 31.000 0.205 1.000 N NA
 2020118 1604303 SFV_1329 SFV_1330 ycjQ   FALSE 0.526 18.000 0.000 NA   NA
 1604303 1604304 SFV_1330 SFV_1331   ycjS FALSE 0.223 67.000 0.000 NA   NA
 1604304 2020119 SFV_1331 SFV_1332 ycjS ycjT TRUE 0.780 -3.000 0.000 NA   NA
 2020119 2020120 SFV_1332 SFV_1333 ycjT ycjU TRUE 0.811 -3.000 0.000 1.000   NA
 2020120 2020121 SFV_1333 SFV_1334 ycjU ycjV TRUE 0.795 14.000 0.103 1.000   NA
 2020121 1604308 SFV_1334 SFV_1335 ycjV ompG FALSE 0.059 198.000 0.000 NA   NA
 2020123 2020124 SFV_1337 SFV_1338 ycjX ycjF TRUE 0.992 -3.000 0.791 NA   NA
 2020124 2020125 SFV_1338 SFV_1339 ycjF tyrR FALSE 0.321 148.000 0.137 NA   NA
 2020128 2020129 SFV_1342 SFV_1343 ycjI   FALSE 0.037 231.000 0.000 1.000 N NA
 2020129 2020130 SFV_1343 SFV_1344     FALSE 0.526 18.000 0.000 NA   NA
 2020132 2020133 SFV_1346 SFV_1347     TRUE 0.939 0.000 0.000 0.001   NA
 2020133 2020134 SFV_1347 SFV_1348     FALSE 0.005 620.000 0.000 1.000   NA
 2020134 2020135 SFV_1348 SFV_1349     TRUE 0.782 141.000 0.182 1.000 Y NA
 2020136 2020137 SFV_1350 SFV_1351     FALSE 0.146 301.000 0.000 1.000 Y NA
 2020138 2020139 SFV_1352 SFV_1353     TRUE 0.905 -42.000 0.000 1.000 Y NA
 2020140 2020141 SFV_1354 SFV_1355     TRUE 0.673 7.000 0.000 NA   NA
 2020141 2020142 SFV_1355 SFV_1356     FALSE 0.006 495.000 0.000 NA   NA
 2020142 2020143 SFV_1356 SFV_1357     FALSE 0.208 93.000 0.000 NA   NA
 2020143 2020144 SFV_1357 SFV_1358     FALSE 0.010 364.000 0.000 NA   NA
 2020144 2020145 SFV_1358 SFV_1359     TRUE 0.783 0.000 0.000 NA   NA
 2020147 2020148 SFV_1361 SFV_1362     TRUE 0.991 0.000 0.667 NA   NA
 2020148 2020149 SFV_1362 SFV_1363     TRUE 0.780 -3.000 0.000 NA   NA
 2020149 1604337 SFV_1363 SFV_1364     FALSE 0.068 190.000 0.000 NA   NA
 1604337 1604338 SFV_1364 SFV_1365     TRUE 0.750 2.000 0.000 NA   NA
 1604338 1604339 SFV_1365 SFV_1366     TRUE 0.735 3.000 0.000 NA   NA
 1604339 1604340 SFV_1366 SFV_1367     TRUE 0.713 4.000 0.000 NA   NA
 1604340 2020150 SFV_1367 SFV_1368     FALSE 0.191 115.000 0.000 NA   NA
 2020152 2020153 SFV_1370 SFV_1371 insB   FALSE 0.341 208.000 0.000 1.000 Y NA
 2020153 2020154 SFV_1371 SFV_1372     FALSE 0.425 28.000 0.000 NA   NA
 2020154 2020155 SFV_1372 SFV_1373     FALSE 0.059 197.000 0.000 NA   NA
 2020155 2020156 SFV_1373 SFV_1374     FALSE 0.462 24.000 0.000 NA   NA
 2020156 2020157 SFV_1374 SFV_1375     FALSE 0.469 -49.000 0.000 NA   NA
 2020158 2020159 SFV_1376 SFV_1377 sitD sitC TRUE 0.998 -3.000 0.525 0.005 Y NA
 2020159 2020160 SFV_1377 SFV_1378 sitC sitB TRUE 0.948 171.000 0.857 0.081 Y NA
 2020160 2020161 SFV_1378 SFV_1379 sitB sitA TRUE 0.998 0.000 0.894 1.000 Y NA
 2020161 2020162 SFV_1379 SFV_1380 sitA   FALSE 0.008 451.000 0.000 1.000   NA
 2020162 2020163 SFV_1380 SFV_1381     TRUE 0.783 0.000 0.000 NA   NA
 2020164 2020165 SFV_1382 SFV_1383 insB   FALSE 0.112 391.000 0.000 0.075 Y NA
 2020165 2020166 SFV_1383 SFV_1384     TRUE 0.969 -3.000 0.000 NA Y NA
 2020166 2020167 SFV_1384 SFV_1385     TRUE 0.901 20.000 0.000 NA Y NA
 2020167 2020168 SFV_1385 SFV_1386     FALSE 0.026 259.000 0.000 NA   NA
 1604361 2020170 SFV_1388 SFV_1389 pphA   FALSE 0.413 -813.000 0.000 NA   NA
 2020170 2020171 SFV_1389 SFV_1390     TRUE 0.782 141.000 0.182 1.000 Y NA
 2020172 2020173 SFV_1391 SFV_1392     TRUE 0.924 21.000 0.353 NA   NA
 2020173 2020174 SFV_1392 SFV_1393   yebU FALSE 0.411 118.000 0.121 NA   NA
 2020174 2020175 SFV_1393 SFV_1394 yebU   TRUE 0.803 74.000 0.420 NA   NA
 2020175 2020176 SFV_1394 SFV_1395     FALSE 0.350 46.000 0.037 NA   NA
 2020176 2020177 SFV_1395 SFV_1396     TRUE 0.978 -37.000 0.840 NA   NA
 2020178 2020179 SFV_1397 SFV_1398   proQ TRUE 0.761 97.000 0.081 NA Y NA
 2020179 2020180 SFV_1398 SFV_1399 proQ prc TRUE 0.903 20.000 0.304 NA N NA
 2020180 2020181 SFV_1399 SFV_1400 prc htpX FALSE 0.192 192.000 0.042 0.021 N NA
 2020183 2020184 SFV_1402 SFV_1403     FALSE 0.005 541.000 0.000 NA   NA
 2020184 2020185 SFV_1403 SFV_1404     TRUE 0.837 75.000 0.500 NA   NA
 2020185 2020186 SFV_1404 SFV_1405   cspC FALSE 0.003 826.000 0.000 NA   NA
 2020186 2020187 SFV_1405 SFV_1406 cspC yebH FALSE 0.129 166.000 0.038 1.000   NA
 2020188 2020189 SFV_1407 SFV_1408   insB FALSE 0.043 220.000 0.000 NA   NA
 2020189 2020190 SFV_1408 SFV_1409 insB   FALSE 0.042 223.000 0.000 NA   NA
 2020190 2020191 SFV_1409 SFV_1410   manZ TRUE 0.925 55.000 0.755 NA   NA
 2020191 2020192 SFV_1410 SFV_1411 manZ manY TRUE 0.997 13.000 0.939 0.010 Y NA
 2020192 2020193 SFV_1411 SFV_1412 manY manX TRUE 0.836 63.000 0.000 0.010 Y NA
 2020195 2020196 SFV_1414 SFV_1415   sdaA TRUE 0.724 131.000 0.389 NA N NA
 2020196 2020197 SFV_1415 SFV_1416 sdaA yeaB FALSE 0.482 202.000 0.409 1.000   NA
 2020197 2020198 SFV_1416 SFV_1417 yeaB pabB TRUE 0.890 4.000 0.116 1.000   NA
 2020200 2020201 SFV_1419 SFV_1420     FALSE 0.011 356.000 0.000 NA   NA
 2020202 2020203 SFV_1421 SFV_1422   yeaZ FALSE 0.439 58.000 0.082 1.000 N NA
 2020203 2020204 SFV_1422 SFV_1423 yeaZ   FALSE 0.326 40.000 0.024 1.000 N NA
 2020204 2020205 SFV_1423 SFV_1424   fadD FALSE 0.293 172.000 0.169 1.000 N NA
 2020205 2020206 SFV_1424 SFV_1425 fadD rnd FALSE 0.446 70.000 0.115 1.000 N NA
 2020207 2020208 SFV_1426 SFV_1427 yeaX   TRUE 0.562 56.000 0.043 0.050   NA
 2020209 2020210 SFV_1428 SFV_1429     TRUE 0.782 141.000 0.182 1.000 Y NA
 2020211 2020212 SFV_1430 SFV_1431     FALSE 0.024 272.000 0.000 NA   NA
 2020213 2020214 SFV_1432 SFV_1433 insB yeaF FALSE 0.006 424.000 0.000 NA N NA
 2020214 2020215 SFV_1433 SFV_1434 yeaF   FALSE 0.340 90.000 0.067 NA   NA
 2020216 2020217 SFV_1435 SFV_1436 yeaD gapA TRUE 0.833 84.000 0.154 1.000 Y NA
 2020218 2020219 SFV_1437 SFV_1438 yeaA   TRUE 0.957 -3.000 0.216 NA   NA
 2020219 2020220 SFV_1438 SFV_1439     FALSE 0.010 370.000 0.000 NA   NA
 2020220 2020221 SFV_1439 SFV_1440     TRUE 0.854 27.000 0.250 1.000 N NA
 2020221 1604414 SFV_1440 SFV_1441   ydjJ FALSE 0.066 192.000 0.000 NA   NA
 1604414 2020222 SFV_1441 SFV_1442 ydjJ   FALSE 0.495 21.000 0.000 NA   NA
 2020222 2020223 SFV_1442 SFV_1443     TRUE 0.990 5.000 0.368 NA Y NA
 2020223 2020224 SFV_1443 SFV_1444     TRUE 0.931 10.000 0.269 NA N NA
 2020224 2020225 SFV_1444 SFV_1445     FALSE 0.440 173.000 0.269 1.000 N NA
 2020225 1604419 SFV_1445 SFV_1446   ydjE TRUE 0.578 13.000 0.000 NA   NA
 2020228 2020229 SFV_1449 SFV_1450 ydjB ansA TRUE 0.663 11.000 0.040 1.000 N NA
 2020229 2020230 SFV_1450 SFV_1451 ansA sppA FALSE 0.121 215.000 0.113 1.000 N NA
 2020231 2020232 SFV_1452 SFV_1453 ydjA selD FALSE 0.205 117.000 0.033 1.000 N NA
 2020232 2020233 SFV_1453 SFV_1454 selD topB FALSE 0.530 -52.000 0.041 1.000 N NA
 2020233 2020234 SFV_1454 SFV_1455 topB   FALSE 0.172 128.000 0.000 NA   NA
 2020234 2020235 SFV_1455 SFV_1456   insB FALSE 0.039 228.000 0.000 NA   NA
 1604434 2020240 SFV_1461 SFV_1462     FALSE 0.223 67.000 0.000 NA   NA
 2020240 1604436 SFV_1462 SFV_1463     TRUE 0.783 0.000 0.000 NA   NA
 1604436 2020241 SFV_1463 SFV_1464     TRUE 0.564 -27.000 0.000 NA   NA
 2020243 2020244 SFV_1466 SFV_1467   ynjA FALSE 0.280 55.000 0.032 NA   NA
 2020244 2020245 SFV_1467 SFV_1468 ynjA ydjZ TRUE 0.895 0.000 0.087 NA   NA
 2020245 2020246 SFV_1468 SFV_1469 ydjZ ydjY TRUE 0.832 18.000 0.174 NA   NA
 2020246 2020247 SFV_1469 SFV_1470 ydjY ydjX TRUE 0.838 5.000 0.083 NA   NA
 2020247 2020248 SFV_1470 SFV_1471 ydjX xthA FALSE 0.072 167.000 0.016 NA   NA
 1604445 2020249 SFV_1472 SFV_1473 cstC   TRUE 0.780 -3.000 0.000 NA   NA
 2020249 2020250 SFV_1473 SFV_1474     TRUE 0.943 -3.000 0.179 1.000 N NA
 2020250 1604448 SFV_1474 SFV_1475   astB TRUE 0.780 -3.000 0.000 NA   NA
 1604448 2020251 SFV_1475 SFV_1476 astB ydjS TRUE 0.695 -7.000 0.000 NA   NA
 2020251 2020252 SFV_1476 SFV_1477 ydjS spy FALSE 0.011 330.000 0.000 NA N NA
 2020252 2020253 SFV_1477 SFV_1478 spy   FALSE 0.147 140.000 0.028 NA   NA
 2020254 2020255 SFV_1479 SFV_1480   nadE FALSE 0.026 230.000 0.010 1.000 N NA
 2020256 2020257 SFV_1481 SFV_1482 osmE celA FALSE 0.022 299.000 0.000 1.000   NA
 2020257 2020258 SFV_1482 SFV_1483 celA celB TRUE 0.966 85.000 0.500 0.010 Y NA
 2020258 2020259 SFV_1483 SFV_1484 celB celC TRUE 0.995 -46.000 0.833 0.010 Y NA
 2020259 1604458 SFV_1484 SFV_1485 celC celD TRUE 0.609 11.000 0.000 NA   NA
 1604458 2020260 SFV_1485 SFV_1486 celD celF FALSE 0.198 105.000 0.000 NA   NA
 2020260 2020261 SFV_1486 SFV_1487 celF ydjC TRUE 0.973 13.000 0.429 0.016   NA
 2020263 1604463 SFV_1489 SFV_1490     FALSE 0.022 276.000 0.000 NA   NA
 1604464 2020264 SFV_1491 SFV_1493     FALSE 0.163 133.000 0.000 NA   NA
 2020264 2020265 SFV_1493 SFV_1494   yniC FALSE 0.175 163.000 0.068 NA   NA
 2020267 2020268 SFV_1496 SFV_1497     FALSE 0.197 106.000 0.000 NA   NA
 2020268 2020269 SFV_1497 SFV_1498   pfkB FALSE 0.200 101.000 0.000 NA   NA
 2020271 1604473 SFV_1500 SFV_1503     FALSE 0.245 61.000 0.000 NA   NA
 1604473 2020272 SFV_1503 SFV_1501   insB FALSE 0.397 -1132.000 0.000 NA   NA
 2020273 2020274 SFV_1502 SFV_1504   thrS FALSE 0.003 860.000 0.000 NA   NA
 2020274 2020275 SFV_1504 SFV_1505 thrS infC TRUE 0.847 112.000 0.186 1.000 Y NA
 2020275 2020276 SFV_1505 SFV_1506 infC rpmI TRUE 0.963 82.000 0.652 1.000 Y NA
 2020276 2020277 SFV_1506 SFV_1507 rpmI rplT TRUE 0.989 53.000 0.928 0.012 Y NA
 2020277 2020278 SFV_1507 SFV_1508 rplT pheM FALSE 0.174 127.000 0.000 NA   NA
 2020278 2020279 SFV_1508 SFV_1509 pheM pheS FALSE 0.069 189.000 0.000 NA   NA
 2020279 2020280 SFV_1509 SFV_1510 pheS pheT TRUE 0.995 15.000 0.574 0.001 Y NA
 2020280 2020281 SFV_1510 SFV_1511 pheT himA TRUE 0.931 5.000 0.208 1.000 N NA
 2020281 2020282 SFV_1511 SFV_1512 himA btuC FALSE 0.185 101.000 0.023 1.000 N NA
 2020282 2020283 SFV_1512 SFV_1513 btuC btuE FALSE 0.423 63.000 0.084 1.000 N NA
 2020283 2020284 SFV_1513 SFV_1514 btuE btuD TRUE 0.786 0.000 0.000 1.000 N NA
 2020284 2020285 SFV_1514 SFV_1515 btuD nlpC FALSE 0.178 78.000 0.000 NA N NA
 2020287 2020288 SFV_1517 SFV_1518     TRUE 0.642 10.000 0.031 NA   NA
 2020289 2020290 SFV_1519 SFV_1520 ydiE aroH FALSE 0.258 105.000 0.054 NA N NA
 2020290 2020291 SFV_1520 SFV_1521 aroH ydiA FALSE 0.346 157.000 0.165 1.000   NA
 2020293 2020294 SFV_1523 SFV_1524 ydiD ydiT FALSE 0.438 57.000 0.080 1.000 N NA
 2020294 2020295 SFV_1524 SFV_1525 ydiT ydiS TRUE 0.996 -3.000 0.400 0.050 Y NA
 2020295 2020296 SFV_1525 SFV_1526 ydiS ydiR TRUE 0.988 56.000 1.000 0.050 Y NA
 2020296 2020297 SFV_1526 SFV_1527 ydiR ydiQ TRUE 0.996 20.000 1.000 0.017 Y NA
 2020301 2020302 SFV_1531 SFV_1532     FALSE 0.006 519.000 0.000 1.000 N NA
 2020302 2020303 SFV_1532 SFV_1533     FALSE 0.015 334.000 0.000 1.000   NA
 2020303 2020304 SFV_1533 SFV_1534     TRUE 0.555 -28.000 0.000 NA   NA
 2020305 2020306 SFV_1535 SFV_1536 insB   FALSE 0.437 183.000 0.000 1.000 Y NA
 2020307 1604510 SFV_1537 SFV_1538     FALSE 0.003 1492.000 0.000 NA   NA
 1604510 1604511 SFV_1538 SFV_1539     FALSE 0.199 102.000 0.000 NA   NA
 1604511 1604512 SFV_1539 SFV_1540     FALSE 0.131 144.000 0.000 NA   NA
 1604512 2020308 SFV_1540 SFV_1541     TRUE 0.557 15.000 0.000 NA   NA
 2020308 2020309 SFV_1541 SFV_1542     FALSE 0.014 326.000 0.000 NA   NA
 2020309 2020310 SFV_1542 SFV_1543     FALSE 0.011 347.000 0.000 NA   NA
 2020310 2020311 SFV_1543 SFV_1544   relB FALSE 0.003 732.000 0.000 NA   NA
 2020311 2020312 SFV_1544 SFV_1545 relB   FALSE 0.108 327.000 0.000 NA Y NA
 2020312 2020313 SFV_1545 SFV_1546     TRUE 0.782 141.000 0.182 1.000 Y NA
 2020314 2020315 SFV_1547 SFV_1548   ydfI TRUE 0.687 89.000 0.250 1.000   NA
 2020316 2020317 SFV_1549 SFV_1550   ydfH FALSE 0.081 178.000 0.000 NA   NA
 2020317 2020318 SFV_1550 SFV_1551 ydfH ydfG FALSE 0.182 137.000 0.000 1.000   NA
 2020321 2020322 SFV_1554 SFV_1555 ydeI   FALSE 0.036 234.000 0.000 NA   NA
 2020322 2020323 SFV_1555 SFV_1556     FALSE 0.444 141.000 0.182 NA   NA
 2020324 2020325 SFV_1557 SFV_1558     FALSE 0.101 348.000 0.304 NA   NA
 1604532 2020327 SFV_1560 SFV_1561 speG   FALSE 0.381 35.000 0.000 NA   NA
 2020328 2020329 SFV_1562 SFV_1563   rspA FALSE 0.054 206.000 0.020 1.000   NA
 2020329 2020330 SFV_1563 SFV_1564 rspA   FALSE 0.213 77.000 0.000 1.000 N NA
 2020331 2020332 SFV_1565 SFV_1566     TRUE 0.548 -42.000 0.000 1.000   NA
 2020332 2020333 SFV_1566 SFV_1567   ydeW FALSE 0.024 289.000 0.000 1.000   NA
 2020334 2020335 SFV_1568 SFV_1569   ydeY TRUE 0.997 -6.000 0.818 1.000 Y NA
 2020335 2020336 SFV_1569 SFV_1570 ydeY ydeZ TRUE 0.998 0.000 0.788 0.052 Y NA
 2020336 1604543 SFV_1570 SFV_1571 ydeZ   TRUE 0.592 12.000 0.000 NA   NA
 1604543 2020337 SFV_1571 SFV_1572     FALSE 0.046 215.000 0.000 NA   NA
 2020337 2020338 SFV_1572 SFV_1573     TRUE 0.905 -42.000 0.000 1.000 Y NA
 2020338 2020339 SFV_1573 SFV_1574   yneB FALSE 0.452 25.000 0.000 1.000 N NA
 2020339 2020340 SFV_1574 SFV_1575 yneB   FALSE 0.510 24.000 0.000 1.000   NA
 2020340 2020341 SFV_1575 SFV_1576     FALSE 0.390 40.000 0.000 1.000   NA
 2020343 2020344 SFV_1578 SFV_1579     TRUE 0.578 13.000 0.000 NA   NA
 2020345 2020346 SFV_1580 SFV_1581 uxaB   FALSE 0.041 227.000 0.000 1.000 N NA
 2020346 2020347 SFV_1581 SFV_1582     FALSE 0.315 139.000 0.098 NA   NA
 2020347 2020348 SFV_1582 SFV_1583   yneH FALSE 0.459 29.000 0.037 NA   NA
 2020348 1604556 SFV_1583 SFV_1584 yneH   FALSE 0.210 76.000 0.000 NA   NA
 1604556 2020349 SFV_1584 SFV_1585     TRUE 0.780 -3.000 0.000 NA   NA
 2020350 2020351 SFV_1586 SFV_1587 insB   FALSE 0.216 70.000 0.000 NA   NA
 2020351 2020352 SFV_1587 SFV_1588   ydeA FALSE 0.117 150.000 0.000 NA   NA
 2020354 2020355 SFV_1590 SFV_1591 marR marA TRUE 0.994 20.000 0.667 0.040 Y NA
 2020355 2020356 SFV_1591 SFV_1592 marA marB FALSE 0.398 32.000 0.000 NA   NA
 2020359 2020360 SFV_1595 SFV_1596     FALSE 0.444 141.000 0.182 NA   NA
 2020360 2020361 SFV_1596 SFV_1597     FALSE 0.033 239.000 0.000 NA   NA
 2020362 2020363 SFV_1598 SFV_1599     FALSE 0.431 74.000 0.000 0.073   NA
 2020363 2020364 SFV_1599 SFV_1600     FALSE 0.041 236.000 0.000 1.000   NA
 2020366 1604575 SFV_1601 SFV_1603     FALSE 0.187 118.000 0.000 NA   NA
 1604575 2020367 SFV_1603 SFV_1604     TRUE 0.609 11.000 0.000 NA   NA
 2020367 2020368 SFV_1604 SFV_1605     TRUE 0.973 2.000 0.333 1.000   NA
 2020368 1604578 SFV_1605 SFV_1606     FALSE 0.330 43.000 0.000 NA   NA
 1604578 2020369 SFV_1606 SFV_1607     FALSE 0.158 135.000 0.000 NA   NA
 2020370 2020371 SFV_1608 SFV_1609   mlc TRUE 0.788 125.000 0.455 1.000 N NA
 2020371 2020372 SFV_1609 SFV_1610 mlc ynfL TRUE 0.909 135.000 0.408 1.000 Y NA
 1604583 2020373 SFV_1611 SFV_1612 ynfM asr FALSE 0.008 397.000 0.000 NA   NA
 2020373 2020374 SFV_1612 SFV_1613 asr   FALSE 0.022 276.000 0.000 NA   NA
 2020375 2020376 SFV_1614 SFV_1615     TRUE 0.997 -13.000 0.869 0.076 Y NA
 2020378 2020379 SFV_1617 SFV_1618 pntB pntA TRUE 0.997 11.000 0.745 0.001 Y NA
 2020380 2020381 SFV_1619 SFV_1620     FALSE 0.210 186.000 0.143 NA   NA
 2020381 2020382 SFV_1620 SFV_1621   ydgB TRUE 0.663 37.000 0.140 1.000 N NA
 2020384 2020385 SFV_1623 SFV_1624 rstA   FALSE 0.049 225.000 0.000 1.000   NA
 2020385 2020386 SFV_1624 SFV_1625   rstB FALSE 0.194 179.000 0.000 0.087   NA
 2020386 2020387 SFV_1625 SFV_1626 rstB tus TRUE 0.619 76.000 0.200 1.000   NA
 2020388 2020389 SFV_1627 SFV_1628 fumC fumA TRUE 0.740 143.000 0.000 0.001 Y NA
 2020390 2020391 SFV_1629 SFV_1630 manA ydgA TRUE 0.895 101.000 0.778 NA   NA
 2020392 1604604 SFV_1631 SFV_1632 uidC uidB FALSE 0.350 39.000 0.000 NA   NA
 1604604 2020393 SFV_1632 SFV_1633 uidB uidA TRUE 0.780 -3.000 0.000 NA   NA
 2020393 2020394 SFV_1633 SFV_1634 uidA uidR FALSE 0.009 388.000 0.000 1.000 N NA
 2020394 1604607 SFV_1634 SFV_1636 uidR hdhA FALSE 0.038 229.000 0.000 NA   NA
 1604607 2020395 SFV_1636 SFV_1635 hdhA insB FALSE 0.414 -679.000 0.000 NA   NA
 2020395 2020396 SFV_1635 SFV_1637 insB malI FALSE 0.003 977.000 0.000 1.000 N NA
 2020397 2020398 SFV_1638 SFV_1639 malX malY TRUE 0.936 31.000 0.531 1.000 N NA
 2020398 2020399 SFV_1639 SFV_1640 malY add FALSE 0.448 104.000 0.132 1.000 N NA
 2020401 2020402 SFV_1642 SFV_1643     FALSE 0.446 86.000 0.120 NA   NA
 2020402 2020403 SFV_1643 SFV_1644     FALSE 0.494 77.000 0.148 NA   NA
 2020403 2020404 SFV_1644 SFV_1645     TRUE 0.998 0.000 0.564 0.049 Y NA
 2020404 2020405 SFV_1645 SFV_1646     TRUE 0.996 -7.000 0.537 0.017 Y NA
 2020405 2020406 SFV_1646 SFV_1647   ydgO TRUE 0.998 1.000 0.814 0.049 Y NA
 2020406 2020407 SFV_1647 SFV_1648 ydgO   TRUE 0.998 4.000 0.924 0.049 Y NA
 2020407 2020408 SFV_1648 SFV_1649   ydgQ TRUE 0.998 4.000 0.908 0.049 Y NA
 2020408 2020409 SFV_1649 SFV_1650 ydgQ nth TRUE 0.911 0.000 0.109 1.000 N NA
 2020409 2020410 SFV_1650 SFV_1651 nth ydgR FALSE 0.004 611.000 0.000 1.000 N NA
 2020410 2020411 SFV_1651 SFV_1652 ydgR gst TRUE 0.746 105.000 0.344 1.000 N NA
 2020412 2020413 SFV_1653 SFV_1654 pdxY tyrS FALSE 0.296 62.000 0.041 1.000 N NA
 2020413 2020414 SFV_1654 SFV_1655 tyrS pdxH FALSE 0.251 129.000 0.054 1.000 N NA
 2020414 2020415 SFV_1655 SFV_1656 pdxH ydhA FALSE 0.307 59.000 0.034 1.000   NA
 2020415 2020416 SFV_1656 SFV_1657 ydhA   TRUE 0.532 22.000 0.000 1.000   NA
 2020416 2020417 SFV_1657 SFV_1658     TRUE 0.891 24.000 0.000 1.000 Y NA
 2020417 2020418 SFV_1658 SFV_1659     FALSE 0.036 220.000 0.000 NA N NA
 2020421 2020422 SFV_1662 SFV_1663     TRUE 0.974 -6.000 0.412 NA   NA
 2020422 2020423 SFV_1663 SFV_1664     TRUE 0.783 0.000 0.000 NA   NA
 2020423 2020424 SFV_1664 SFV_1665     FALSE 0.087 172.000 0.000 NA   NA
 2020425 2020426 SFV_1666 SFV_1667 sodC   FALSE 0.258 81.000 0.033 1.000   NA
 2020426 2020427 SFV_1667 SFV_1669     FALSE 0.373 49.000 0.045 NA   NA
 2020428 2020429 SFV_1668 SFV_1670   nemA TRUE 0.881 37.000 0.362 1.000 N NA
 2020429 2020430 SFV_1670 SFV_1671 nemA gloA FALSE 0.314 81.000 0.057 1.000 N NA
 2020430 2020431 SFV_1671 SFV_1672 gloA rnt FALSE 0.453 103.000 0.136 1.000 N NA
 2020431 2020432 SFV_1672 SFV_1673 rnt lhr FALSE 0.396 132.000 0.000 0.013   NA
 2020432 2020433 SFV_1673 SFV_1674 lhr   FALSE 0.465 -55.000 0.030 NA   NA
 2020434 2020435 SFV_1675 SFV_1676   ydhD FALSE 0.004 611.000 0.000 NA N NA
 2020436 2020437 SFV_1677 SFV_1678 ydhO sodB FALSE 0.137 128.000 0.015 1.000 N NA
 2020441 2020442 SFV_1682 SFV_1683 ydhC cfa FALSE 0.020 291.000 0.000 1.000 N NA
 1604659 1604660 SFV_1687 SFV_1688     TRUE 0.693 5.000 0.000 NA   NA
 1604660 2020446 SFV_1688 SFV_1689     FALSE 0.196 108.000 0.000 NA   NA
 2020446 2020447 SFV_1689 SFV_1690     FALSE 0.177 126.000 0.000 NA   NA
 2020448 2020449 SFV_1691 SFV_1692   ydhU TRUE 0.724 52.000 0.222 NA   NA
 2020449 2020450 SFV_1692 SFV_1693 ydhU   TRUE 0.997 -3.000 0.444 0.049 Y NA
 2020450 2020451 SFV_1693 SFV_1694     TRUE 0.686 64.000 0.235 NA   NA
 2020451 2020452 SFV_1694 SFV_1695     TRUE 0.977 4.000 0.458 NA   NA
 2020452 2020453 SFV_1695 SFV_1696     TRUE 0.648 326.000 0.600 0.016 Y NA
 2020453 2020454 SFV_1696 SFV_1697     FALSE 0.006 457.000 0.000 NA   NA
 2020455 2020456 SFV_1698 SFV_1699 insB pykF FALSE 0.013 333.000 0.000 1.000 N NA
 2020456 2020457 SFV_1699 SFV_1700 pykF lpp FALSE 0.016 312.000 0.000 1.000 N NA
 2020458 2020459 SFV_1701 SFV_1702 ynhG ynhA FALSE 0.213 149.000 0.069 NA   NA
 2020459 2020460 SFV_1702 SFV_1703 ynhA   TRUE 0.875 13.000 0.183 NA   NA
 2020460 2020461 SFV_1703 SFV_1704   ynhC TRUE 0.951 -3.000 0.193 1.000 N NA
 2020461 2020462 SFV_1704 SFV_1705 ynhC ynhD TRUE 0.945 79.000 0.482 1.000 Y NA
 2020462 2020463 SFV_1705 SFV_1706 ynhD ynhE TRUE 0.991 10.000 0.466 1.000 Y NA
 2020463 2020464 SFV_1706 SFV_1707 ynhE ydiC TRUE 0.709 9.000 0.041 NA   NA
 2020464 2020465 SFV_1707 SFV_1708 ydiC   FALSE 0.005 548.000 0.000 NA   NA
 2020465 2020466 SFV_1708 SFV_1709     TRUE 0.535 19.000 0.032 NA   NA
 2020466 2020467 SFV_1709 SFV_1710   ydiJ TRUE 0.912 -3.000 0.129 NA N NA
 2020468 2020469 SFV_1711 SFV_1712     FALSE 0.008 401.000 0.000 NA   NA
 2020469 1604685 SFV_1712 SFV_1713     FALSE 0.200 100.000 0.000 NA   NA
 1604685 2020470 SFV_1713 SFV_1714   insB FALSE 0.406 -921.000 0.000 NA   NA
 2020470 2020471 SFV_1714 SFV_1715 insB   FALSE 0.004 712.000 0.000 1.000 N NA
 2020473 2020474 SFV_1717 SFV_1718 insB ydiB FALSE 0.436 27.000 0.000 1.000 N NA
 2020474 2020475 SFV_1718 SFV_1719 ydiB aroD TRUE 0.913 31.000 0.113 1.000 Y NA
 2020477 2020478 SFV_1721 SFV_1722     TRUE 0.735 3.000 0.000 NA   NA
 2020478 2020479 SFV_1722 SFV_1723     TRUE 0.942 52.000 0.600 0.046   NA
 2020479 1604696 SFV_1723 SFV_1724   yddA FALSE 0.020 291.000 0.000 NA   NA
 2020481 2020482 SFV_1726 SFV_1727 insB yddB FALSE 0.006 487.000 0.000 1.000 N NA
 2020482 1604700 SFV_1727 SFV_1728 yddB pqqL FALSE 0.261 57.000 0.000 NA   NA
 1604700 2020483 SFV_1728 SFV_1729 pqqL insB FALSE 0.389 -1749.000 0.000 NA   NA
 2020483 2020484 SFV_1729 SFV_1730 insB gadB FALSE 0.002 2172.000 0.000 1.000 N NA
 2020484 2020485 SFV_1730 SFV_1731 gadB xasA TRUE 0.640 156.000 0.103 1.000 Y NA
 2020485 2020486 SFV_1731 SFV_1732 xasA   FALSE 0.195 131.000 0.000 1.000   NA
 2020486 2020487 SFV_1732 SFV_1733     FALSE 0.011 377.000 0.000 1.000   NA
 2020487 2020488 SFV_1733 SFV_1734     FALSE 0.335 42.000 0.000 NA   NA
 2020488 2020489 SFV_1734 SFV_1735     FALSE 0.027 258.000 0.000 NA   NA
 2020489 2020490 SFV_1735 SFV_1736     FALSE 0.505 -55.000 0.000 1.000   NA
 2020490 2020491 SFV_1736 SFV_1737     TRUE 0.993 -3.000 0.333 1.000 Y NA
 2020491 2020492 SFV_1737 SFV_1738     TRUE 0.990 -7.000 0.219 0.003 Y NA
 2020493 2020494 SFV_1739 SFV_1740 osmC insB FALSE 0.087 173.000 0.000 1.000 N NA
 2020495 2020496 SFV_1741 SFV_1742   sfcA FALSE 0.340 41.000 0.000 NA   NA
 2020496 1604715 SFV_1742 SFV_1743 sfcA adhP FALSE 0.198 104.000 0.000 NA   NA
 1604715 2020497 SFV_1743 SFV_1744 adhP yddM FALSE 0.220 68.000 0.000 NA   NA
 2020498 2020499 SFV_1745 SFV_1746 fdnI fdnH TRUE 0.994 -7.000 0.333 0.002 Y NA
 2020499 2020500 SFV_1746 SFV_1747 fdnH fdnG TRUE 0.992 13.000 0.429 0.002 Y NA
 2020503 2020504 SFV_1750 SFV_1751     FALSE 0.238 63.000 0.000 NA   NA
 2020504 2020505 SFV_1751 SFV_1752     FALSE 0.089 170.000 0.000 NA   NA
 2020505 2020506 SFV_1752 SFV_1753     FALSE 0.195 110.000 0.000 NA   NA
 2020508 2020509 SFV_1755 SFV_1756 insB narU FALSE 0.006 458.000 0.000 1.000 N NA
 2020509 2020510 SFV_1756 SFV_1757 narU narZ TRUE 0.859 82.000 0.556 1.000 N NA
 2020510 2020511 SFV_1757 SFV_1758 narZ narY TRUE 0.996 -3.000 0.833 0.001   NA
 2020511 2020512 SFV_1758 SFV_1759 narY   FALSE 0.427 35.000 0.000 1.000   NA
 2020512 2020513 SFV_1759 SFV_1760     FALSE 0.223 114.000 0.000 1.000   NA
 2020514 2020515 SFV_1761 SFV_1762   yncB FALSE 0.118 162.000 0.000 1.000   NA
 2020515 2020516 SFV_1762 SFV_1763 yncB   FALSE 0.196 130.000 0.000 1.000   NA
 2020516 2020517 SFV_1763 SFV_1764     TRUE 0.905 -42.000 0.000 1.000 Y NA
 1604737 2020518 SFV_1765 SFV_1766     FALSE 0.421 -364.000 0.000 NA   NA
 2020519 2020520 SFV_1767 SFV_1768     FALSE 0.212 86.000 0.000 NA   NA
 2020520 2020521 SFV_1768 SFV_1769     FALSE 0.004 617.000 0.000 NA   NA
 2020521 2020522 SFV_1769 SFV_1770     FALSE 0.059 210.000 0.000 1.000   NA
 2020522 2020523 SFV_1770 SFV_1771     TRUE 0.855 22.000 0.216 1.000 N NA
 2020523 1604744 SFV_1771 SFV_1772     TRUE 0.659 -10.000 0.000 NA   NA
 2020525 2020526 SFV_1774 SFV_1775     FALSE 0.005 592.000 0.000 NA   NA
 2020526 2020527 SFV_1775 SFV_1776   tehB FALSE 0.040 303.000 0.088 NA   NA
 2020527 2020528 SFV_1776 SFV_1777 tehB tehA TRUE 0.946 -3.000 0.175 1.000   NA
 2020530 2020531 SFV_1779 SFV_1780 rimL ydcH FALSE 0.226 63.000 0.026 NA   NA
 2020531 2020532 SFV_1780 SFV_1781 ydcH ydcG FALSE 0.140 140.000 0.026 NA   NA
 2020532 2020533 SFV_1781 SFV_1782 ydcG   FALSE 0.028 255.000 0.000 NA   NA
 2020537 2020538 SFV_1786 SFV_1787     TRUE 0.782 141.000 0.182 1.000 Y NA
 2020538 2020539 SFV_1787 SFV_1788   ydcA FALSE 0.005 596.000 0.000 NA   NA
 2020539 2020540 SFV_1788 SFV_1789 ydcA cybB FALSE 0.031 245.000 0.000 NA   NA
 2020542 2020543 SFV_1791 SFV_1792 aldA   FALSE 0.020 305.000 0.040 NA   NA
 2020547 2020548 SFV_1796 SFV_1797     TRUE 0.782 141.000 0.182 1.000 Y NA
 2020549 2020550 SFV_1799 SFV_1800     TRUE 0.544 16.000 0.000 NA   NA
 2020550 2020551 SFV_1800 SFV_1801     FALSE 0.490 173.000 0.179 0.002   NA
 2020551 2020552 SFV_1801 SFV_1802   ydbD FALSE 0.088 171.000 0.000 NA   NA
 2020554 2020555 SFV_1804 SFV_1805 hslJ ldhA FALSE 0.170 99.000 0.000 NA N NA
 2020556 2020557 SFV_1806 SFV_1807 ydbH ynbE TRUE 0.874 -3.000 0.068 NA   NA
 2020559 1604782 SFV_1809 SFV_1810 insB hslJ TRUE 0.750 2.000 0.000 NA   NA
 1604782 2020560 SFV_1810 SFV_1811 hslJ ydbK FALSE 0.006 537.000 0.000 NA   NA
 2020560 1604784 SFV_1811 SFV_1812 ydbK   FALSE 0.010 367.000 0.000 NA   NA
 1604784 2020561 SFV_1812 SFV_1813   ynaF FALSE 0.218 69.000 0.000 NA   NA
 2020561 2020562 SFV_1813 SFV_1814 ynaF ydaO FALSE 0.069 176.000 0.000 NA N NA
 2020563 2020564 SFV_1815 SFV_1816 dbpA   FALSE 0.006 478.000 0.000 1.000 N NA
 2020566 2020567 SFV_1818 SFV_1819 ydaL   FALSE 0.003 739.000 0.000 NA   NA
 2020567 2020568 SFV_1819 SFV_1820     TRUE 0.973 0.000 0.293 1.000   NA
 2020571 2020572 SFV_1823 SFV_1824   ogt FALSE 0.005 544.000 0.000 1.000 N NA
 2020572 2020573 SFV_1824 SFV_1825 ogt fnr FALSE 0.062 195.000 0.000 1.000 N NA
 2020573 2020574 SFV_1825 SFV_1826 fnr ydaA TRUE 0.921 152.000 0.619 1.000 Y NA
 2020575 2020576 SFV_1827 SFV_1828 ynaJ   FALSE 0.057 200.000 0.000 NA   NA
 2020576 2020577 SFV_1828 SFV_1829     FALSE 0.146 301.000 0.000 1.000 Y NA
 2020579 1604804 SFV_1831 SFV_1832   ycjZ FALSE 0.015 316.000 0.000 NA   NA
 2020580 2020581 SFV_1833 SFV_1834     TRUE 0.782 141.000 0.182 1.000 Y NA
 2020581 1604807 SFV_1834 SFV_1835   recE FALSE 0.324 44.000 0.000 NA   NA
 1604807 2020582 SFV_1835 SFV_1836 recE   TRUE 0.590 -22.000 0.000 NA   NA
 2020582 2020583 SFV_1836 SFV_1837     FALSE 0.379 84.000 0.083 NA   NA
 2020583 2020584 SFV_1837 SFV_1838     FALSE 0.012 340.000 0.000 NA   NA
 2020584 2020585 SFV_1838 SFV_1839     TRUE 0.782 141.000 0.182 1.000 Y NA
 2020585 2020586 SFV_1839 SFV_1840     FALSE 0.032 364.000 0.000 0.036   NA
 2020587 2020588 SFV_1841 SFV_1842     TRUE 0.977 13.000 0.704 NA   NA
 2020588 2020589 SFV_1842 SFV_1843     TRUE 0.986 4.000 0.613 1.000   NA
 2020590 2020591 SFV_1844 SFV_1845 holE   FALSE 0.083 333.000 0.222 1.000   NA
 2020591 2020592 SFV_1845 SFV_1846     TRUE 0.946 24.000 0.500 1.000   NA
 2020593 2020594 SFV_1847 SFV_1848 ptrB yebE FALSE 0.116 209.000 0.092 NA   NA
 2020594 2020595 SFV_1848 SFV_1849 yebE yebF FALSE 0.013 327.000 0.028 NA   NA
 2020595 1604822 SFV_1849 SFV_1850 yebF yebG FALSE 0.269 55.000 0.000 NA   NA
 2020597 2020598 SFV_1852 SFV_1853 eda edd TRUE 0.976 37.000 0.523 1.000 Y NA
 2020598 2020599 SFV_1853 SFV_1854 edd zwf FALSE 0.277 235.000 0.041 1.000 Y NA
 2020600 2020601 SFV_1855 SFV_1856 yebK pykA FALSE 0.297 128.000 0.071 1.000 N NA
 2020602 2020603 SFV_1857 SFV_1858 msbB yebA TRUE 0.915 66.000 0.299 1.000 Y NA
 2020603 2020604 SFV_1858 SFV_1860 yebA yebL TRUE 0.796 16.000 0.131 1.000 N NA
 2020605 2020606 SFV_1859 SFV_1861 yebM yebI TRUE 0.998 -3.000 0.755 0.078 Y NA
 2020607 2020608 SFV_1862 SFV_1863 ruvB ruvA TRUE 0.996 9.000 0.549 0.001 Y NA
 2020610 2020611 SFV_1865 SFV_1866 ruvC yebC TRUE 0.840 35.000 0.277 NA   NA
 2020611 2020612 SFV_1866 SFV_1867 yebC ntpA FALSE 0.447 29.000 0.035 NA   NA
 2020612 2020613 SFV_1867 SFV_1868 ntpA aspS FALSE 0.291 88.000 0.050 1.000 N NA
 1604841 2020614 SFV_1869 SFV_1870 yecD   FALSE 0.390 -1570.000 0.000 NA   NA
 2020614 2020615 SFV_1870 SFV_1871     FALSE 0.004 729.000 0.000 NA   NA
 2020615 2020616 SFV_1871 SFV_1872   ipaH_3 FALSE 0.004 599.000 0.000 NA   NA
 2020617 2020618 SFV_1873 SFV_1874     FALSE 0.271 64.000 0.000 1.000   NA
 2020618 2020619 SFV_1874 SFV_1875     FALSE 0.220 68.000 0.000 NA   NA
 2020619 2020620 SFV_1875 SFV_1876     TRUE 0.863 61.000 0.500 NA   NA
 2020620 2020621 SFV_1876 SFV_1877     FALSE 0.531 -36.000 0.000 NA   NA
 2020621 2020622 SFV_1877 SFV_1878     FALSE 0.451 -64.000 0.000 NA   NA
 2020622 1604851 SFV_1878 SFV_1879     TRUE 0.783 0.000 0.000 NA   NA
 1604851 2020623 SFV_1879 SFV_1880     TRUE 0.555 -28.000 0.000 NA   NA
 2020623 2020624 SFV_1880 SFV_1881     TRUE 0.653 9.000 0.000 NA   NA
 2020624 2020625 SFV_1881 SFV_1882     FALSE 0.251 59.000 0.000 NA   NA
 2020625 2020626 SFV_1882 SFV_1883     TRUE 0.986 11.000 1.000 NA   NA
 2020626 2020627 SFV_1883 SFV_1884     TRUE 0.994 -3.000 1.000 NA   NA
 2020627 2020628 SFV_1884 SFV_1885     FALSE 0.356 38.000 0.000 NA   NA
 2020628 2020629 SFV_1885 SFV_1886     TRUE 0.592 12.000 0.000 NA   NA
 1604860 1604861 SFV_1888 SFV_1889     TRUE 0.713 4.000 0.000 NA   NA
 1604861 1604862 SFV_1889 SFV_1890     TRUE 0.735 3.000 0.000 NA   NA
 1604862 1604863 SFV_1890 SFV_1891     TRUE 0.750 2.000 0.000 NA   NA
 1604863 2020631 SFV_1891 SFV_1892     FALSE 0.082 177.000 0.000 NA   NA
 2020631 2020632 SFV_1892 SFV_1893     FALSE 0.199 102.000 0.000 NA   NA
 2020632 2020633 SFV_1893 SFV_1894     TRUE 0.783 0.000 0.000 NA   NA
 2020634 2020635 SFV_1895 SFV_1896     TRUE 0.782 141.000 0.182 1.000 Y NA
 2020636 2020637 SFV_1897 SFV_1898     TRUE 0.972 0.000 0.000 1.000 Y NA
 2020637 2020638 SFV_1898 SFV_1899     FALSE 0.285 52.000 0.000 NA   NA
 2020638 2020639 SFV_1899 SFV_1900     FALSE 0.202 97.000 0.000 NA   NA
 2020639 2020640 SFV_1900 SFV_1901     FALSE 0.003 1156.000 0.000 NA   NA
 2020640 2020641 SFV_1901 SFV_1902     FALSE 0.002 1800.000 0.000 NA   NA
 2020641 2020642 SFV_1902 SFV_1903     FALSE 0.002 2343.000 0.000 NA   NA
 2020643 2020644 SFV_1904 SFV_1905   yecN TRUE 0.550 53.000 0.126 NA   NA
 2020644 2020645 SFV_1905 SFV_1906 yecN yecO TRUE 0.555 41.000 0.089 NA   NA
 2020645 2020646 SFV_1906 SFV_1907 yecO yecP TRUE 0.973 -3.000 0.315 NA   NA
 2020647 2020648 SFV_1908 SFV_1909     TRUE 0.891 24.000 0.000 1.000 Y NA
 2020649 2020650 SFV_1911 SFV_1912 yecK cutC FALSE 0.009 388.000 0.000 1.000 N NA
 2020650 2020651 SFV_1912 SFV_1913 cutC yecM TRUE 0.718 14.000 0.057 1.000   NA
 2020652 2020653 SFV_1914 SFV_1915 argS yecT FALSE 0.082 177.000 0.000 NA   NA
 2020654 2020655 SFV_1916 SFV_1917     FALSE 0.211 82.000 0.000 NA   NA
 2020655 2020656 SFV_1917 SFV_1918     TRUE 0.783 0.000 0.000 NA   NA
 2020656 2020657 SFV_1918 SFV_1919   flhE FALSE 0.326 52.000 0.000 1.000   NA
 2020657 1604892 SFV_1919 SFV_1920 flhE flhA TRUE 0.783 0.000 0.000 NA   NA
 1604892 2020658 SFV_1920 SFV_1921 flhA flhB FALSE 0.285 52.000 0.000 NA   NA
 2020658 2020659 SFV_1921 SFV_1922 flhB   FALSE 0.004 629.000 0.000 1.000 N NA
 2020659 2020660 SFV_1922 SFV_1923     FALSE 0.146 301.000 0.000 1.000 Y NA
 2020661 2020662 SFV_1924 SFV_1925     FALSE 0.038 229.000 0.000 NA   NA
 2020662 2020663 SFV_1925 SFV_1926     FALSE 0.444 141.000 0.182 NA   NA
 2020664 2020665 SFV_1927 SFV_1928 cheZ cheY TRUE 0.937 11.000 0.000 1.000 Y NA
 2020665 2020666 SFV_1928 SFV_1929 cheY cheB TRUE 0.953 15.000 0.000 0.010 Y NA
 2020666 2020667 SFV_1929 SFV_1930 cheB cheR TRUE 0.964 3.000 0.000 1.000 Y NA
 2020667 2020668 SFV_1930 SFV_1931 cheR tap TRUE 0.961 19.000 0.188 1.000 Y NA
 2020668 2020669 SFV_1931 SFV_1932 tap tar TRUE 0.960 46.000 0.235 0.001 Y NA
 2020669 2020670 SFV_1932 SFV_1933 tar cheW TRUE 0.738 145.000 0.043 0.003 Y NA
 2020670 2020671 SFV_1933 SFV_1934 cheW cheA TRUE 0.990 21.000 0.447 0.002 Y NA
 2020671 2020672 SFV_1934 SFV_1935 cheA motB TRUE 0.997 5.000 0.913 1.000 Y NA
 2020672 2020673 SFV_1935 SFV_1936 motB motA TRUE 0.995 -3.000 0.429 1.000 Y NA
 2020673 2020674 SFV_1936 SFV_1937 motA flhC TRUE 0.768 127.000 0.408 1.000   NA
 1604910 2020675 SFV_1938 SFV_1939 flhD yecG FALSE 0.003 771.000 0.000 NA   NA
 1604912 2020676 SFV_1940 SFV_1941 otsA otsB TRUE 0.544 -31.000 0.000 NA   NA
 2020676 2020677 SFV_1941 SFV_1942 otsB araH FALSE 0.508 167.000 0.037 1.000 Y NA
 2020677 2020678 SFV_1942 SFV_1943 araH araG FALSE 0.110 643.000 0.451 0.002   NA
 2020678 2020679 SFV_1943 SFV_1944 araG araF TRUE 0.956 70.000 0.917 0.002   NA
 2020683 2020684 SFV_1948 SFV_1949   ftn FALSE 0.088 171.000 0.000 NA   NA
 2020687 1604925 SFV_1952 SFV_1953 yecA   FALSE 0.060 196.000 0.000 NA   NA
 1604925 1604926 SFV_1953 SFV_1954     TRUE 0.578 13.000 0.000 NA   NA
 1604926 1604927 SFV_1954 SFV_1955     FALSE 0.269 55.000 0.000 NA   NA
 1604927 2020688 SFV_1955 SFV_1956   pgsA FALSE 0.113 152.000 0.000 NA   NA
 2020688 2020689 SFV_1956 SFV_1957 pgsA uvrC TRUE 0.707 57.000 0.227 1.000 N NA
 2020689 2020690 SFV_1957 SFV_1958 uvrC uvrY TRUE 0.608 63.000 0.086 0.021 N NA
 2020692 2020693 SFV_1960 SFV_1961 sdiA yecC FALSE 0.082 230.000 0.071 1.000   NA
 2020693 2020694 SFV_1961 SFV_1962 yecC yecS TRUE 0.985 -3.000 0.150 1.000 Y NA
 2020694 2020695 SFV_1962 SFV_1963 yecS yedO TRUE 0.933 15.000 0.050 1.000 Y NA
 2020695 2020696 SFV_1963 SFV_1964 yedO fliY TRUE 0.939 105.000 0.469 1.000 Y NA
 2020696 2020697 SFV_1964 SFV_1965 fliY fliZ TRUE 0.713 88.000 0.280 1.000   NA
 2020697 2020698 SFV_1965 SFV_1966 fliZ fliA TRUE 0.585 46.000 0.108 1.000   NA
 2020698 2020699 SFV_1966 SFV_1967 fliA fliC FALSE 0.045 195.000 0.012 1.000 N NA
 2020700 2020701 SFV_1968 SFV_1969 fliD fliS TRUE 0.980 25.000 0.284 0.002 Y NA
 2020701 2020702 SFV_1969 SFV_1970 fliS fliT TRUE 0.976 0.000 0.324 1.000   NA
 2020702 2020703 SFV_1970 SFV_1971 fliT amyA FALSE 0.460 78.000 0.115 1.000   NA
 2020705 2020706 SFV_1973 SFV_1974 yedE yedF TRUE 0.993 -3.000 0.844 NA   NA
 2020706 1604947 SFV_1974 SFV_1975 yedF yedK FALSE 0.197 107.000 0.000 NA   NA
 2020709 2020710 SFV_1978 SFV_1979 ybcM emrE FALSE 0.004 730.000 0.000 1.000 N NA
 2020710 2020711 SFV_1979 SFV_1980 emrE fliE FALSE 0.080 180.000 0.000 1.000 N NA
 1604953 2020712 SFV_1981 SFV_1982 fliF fliG FALSE 0.231 65.000 0.000 NA   NA
 2020712 2020713 SFV_1982 SFV_1983 fliG fliH TRUE 0.975 -7.000 0.000 0.003 Y NA
 2020713 2020714 SFV_1983 SFV_1984 fliH fliI TRUE 0.984 0.000 0.000 0.003 Y NA
 2020714 1604957 SFV_1984 SFV_1985 fliI fliJ FALSE 0.517 19.000 0.000 NA   NA
 1604957 2020715 SFV_1985 SFV_1986 fliJ fliK TRUE 0.780 -3.000 0.000 NA   NA
 2020715 2020716 SFV_1986 SFV_1987 fliK fliL TRUE 0.797 105.000 0.119 1.000 Y NA
 2020716 2020717 SFV_1987 SFV_1988 fliL fliM TRUE 0.996 -40.000 0.957 0.001 Y NA
 2020717 2020718 SFV_1988 SFV_1989 fliM fliN TRUE 0.991 -3.000 0.137 0.001 Y NA
 2020718 2020719 SFV_1989 SFV_1990 fliN fliO TRUE 0.994 3.000 0.443 1.000 Y NA
 2020719 2020720 SFV_1990 SFV_1991 fliO fliP TRUE 0.989 0.000 0.203 1.000 Y NA
 2020720 2020721 SFV_1991 SFV_1992 fliP fliQ TRUE 0.997 10.000 0.827 0.006 Y NA
 2020721 2020722 SFV_1992 SFV_1993 fliQ fliR TRUE 0.971 9.000 0.000 0.002 Y NA
 2020722 2020723 SFV_1993 SFV_1994 fliR rcsA FALSE 0.021 285.000 0.000 1.000 N NA
 2020725 1604969 SFV_1996 SFV_1997     FALSE 0.018 298.000 0.000 NA   NA
 2020726 2020727 SFV_1998 SFV_1999   yedI FALSE 0.003 642.000 0.008 NA   NA
 2020729 2020730 SFV_2001 SFV_2002 vsr dcm TRUE 0.935 -19.000 0.000 1.000 Y NA
 2020730 2020731 SFV_2002 SFV_2003 dcm yedJ FALSE 0.224 113.000 0.000 1.000   NA
 2020731 2020732 SFV_2003 SFV_2004 yedJ   FALSE 0.015 337.000 0.000 1.000   NA
 2020732 2020733 SFV_2004 SFV_2005     TRUE 0.772 57.000 0.000 1.000 Y NA
 2020735 2020736 SFV_2007 SFV_2008     TRUE 0.905 -42.000 0.000 1.000 Y NA
 2020739 2020740 SFV_2011 SFV_2012 insB yedU FALSE 0.313 46.000 0.000 NA   NA
 2020741 2020742 SFV_2013 SFV_2014 yedV yedW TRUE 0.999 0.000 0.857 0.001 Y NA
 2020743 1604988 SFV_2015 SFV_2016     FALSE 0.196 109.000 0.000 NA   NA
 1604988 2020744 SFV_2016 SFV_2017     TRUE 0.760 1.000 0.000 NA   NA
 2020744 2020745 SFV_2017 SFV_2018     FALSE 0.032 258.000 0.000 1.000   NA
 2020747 2020748 SFV_2020 SFV_2021   ipaH_4 FALSE 0.018 316.000 0.000 1.000   NA
 2020749 2020750 SFV_2022 SFV_2023     FALSE 0.132 143.000 0.000 NA   NA
 2020750 2020751 SFV_2023 SFV_2024     TRUE 0.782 141.000 0.182 1.000 Y NA
 2020751 2020752 SFV_2024 SFV_2025     TRUE 0.759 57.000 0.000 NA Y NA
 2020752 2020753 SFV_2025 SFV_2026     FALSE 0.081 178.000 0.000 NA   NA
 2020753 2020754 SFV_2026 SFV_2027     TRUE 0.780 -3.000 0.000 NA   NA
 2020754 2020755 SFV_2027 SFV_2028     TRUE 0.780 -3.000 0.000 NA   NA
 2020755 2020756 SFV_2028 SFV_2029     FALSE 0.201 99.000 0.000 NA   NA
 2020756 1605002 SFV_2029 SFV_2030     FALSE 0.019 293.000 0.000 NA   NA
 1605002 1605003 SFV_2030 SFV_2031     TRUE 0.713 4.000 0.000 NA   NA
 1605003 1605004 SFV_2031 SFV_2032     TRUE 0.735 3.000 0.000 NA   NA
 1605004 1605005 SFV_2032 SFV_2033     TRUE 0.750 2.000 0.000 NA   NA
 1605005 1605006 SFV_2033 SFV_2034     FALSE 0.432 27.000 0.000 NA   NA
 1605006 2020757 SFV_2034 SFV_2035     TRUE 0.780 -3.000 0.000 NA   NA
 2020757 2020758 SFV_2035 SFV_2036     TRUE 0.760 1.000 0.000 NA   NA
 2020758 2020759 SFV_2036 SFV_2037     TRUE 0.544 16.000 0.000 NA   NA
 2020759 2020760 SFV_2037 SFV_2038     FALSE 0.003 1255.000 0.000 NA   NA
 2020762 2020763 SFV_2040 SFV_2041   insB FALSE 0.395 39.000 0.000 1.000   NA
 2020764 2020765 SFV_2042 SFV_2043     FALSE 0.182 122.000 0.000 NA   NA
 2020766 1605018 SFV_2045 SFV_2046     FALSE 0.200 101.000 0.000 NA   NA
 1605018 2020767 SFV_2046 SFV_2047     FALSE 0.004 675.000 0.000 NA   NA
 2020768 2020769 SFV_2048 SFV_2049     FALSE 0.146 301.000 0.000 1.000 Y NA
 1605022 2020770 SFV_2050 SFV_2051     FALSE 0.410 -825.000 0.000 NA   NA
 2020770 2020771 SFV_2051 SFV_2052     TRUE 0.782 141.000 0.182 1.000 Y NA
 2020771 2020772 SFV_2052 SFV_2053   amn FALSE 0.011 352.000 0.000 1.000 N NA
 2020772 2020773 SFV_2053 SFV_2054 amn   FALSE 0.012 343.000 0.000 NA   NA
 1605027 2020774 SFV_2055 SFV_2056     FALSE 0.007 410.000 0.000 NA   NA
 2020774 2020775 SFV_2056 SFV_2057     TRUE 0.942 -9.000 0.120 0.001   NA
 2020776 2020777 SFV_2059 SFV_2060 cbl nac TRUE 0.911 102.000 0.222 0.046 Y NA
 2020778 2020779 SFV_2062 SFV_2063 erfK cobT FALSE 0.192 62.000 0.015 NA   NA
 2020779 2020780 SFV_2063 SFV_2064 cobT cobS TRUE 0.968 12.000 0.056 0.003 Y NA
 2020780 2020781 SFV_2064 SFV_2065 cobS cobU TRUE 0.971 -3.000 0.000 1.000 Y NA
 2020781 2020782 SFV_2065 SFV_2066 cobU   FALSE 0.003 997.000 0.000 NA   NA
 2020783 2020784 SFV_2067 SFV_2068     FALSE 0.140 141.000 0.000 NA   NA
 2020787 2020788 SFV_2071 SFV_2072 yeeD yeeE TRUE 0.952 14.000 0.419 NA   NA
 2020788 2020789 SFV_2072 SFV_2073 yeeE yeeF FALSE 0.036 233.000 0.000 NA   NA
 2020789 2020790 SFV_2073 SFV_2074 yeeF yeeY FALSE 0.048 213.000 0.000 1.000 N NA
 2020790 2020791 SFV_2074 SFV_2075 yeeY   FALSE 0.259 46.000 0.015 1.000 N NA
 2020791 2020792 SFV_2075 SFV_2076     FALSE 0.211 83.000 0.000 NA   NA
 2020792 2020793 SFV_2076 SFV_2077   insB FALSE 0.484 22.000 0.000 NA   NA
 2020793 2020794 SFV_2077 SFV_2078 insB yefM FALSE 0.032 228.000 0.000 NA N NA
 2020795 2020796 SFV_2079 SFV_2080 hisG hisD TRUE 0.987 6.000 0.171 0.002 Y NA
 2020796 2020797 SFV_2080 SFV_2081 hisD hisC TRUE 0.995 -3.000 0.294 0.002 Y NA
 2020797 2020798 SFV_2081 SFV_2082 hisC hisB TRUE 0.996 0.000 0.341 0.002 Y NA
 2020798 2020799 SFV_2082 SFV_2083 hisB hisH TRUE 0.991 0.000 0.128 0.002 Y NA
 2020799 2020800 SFV_2083 SFV_2084 hisH hisA TRUE 0.983 0.000 0.010 0.002 Y NA
 2020800 2020801 SFV_2084 SFV_2085 hisA hisF TRUE 0.960 -18.000 0.003 0.002 Y NA
 2020801 2020802 SFV_2085 SFV_2086 hisF hisI TRUE 0.996 -6.000 0.430 0.002 Y NA
 2020803 1605060 SFV_2087 SFV_2088 wzzB ugd FALSE 0.195 110.000 0.000 NA   NA
 1605060 2020804 SFV_2088 SFV_2089 ugd gnd FALSE 0.029 250.000 0.000 NA   NA
 2020804 2020805 SFV_2089 SFV_2090 gnd   FALSE 0.003 1117.000 0.000 NA   NA
 2020805 2020806 SFV_2090 SFV_2091   rfc FALSE 0.003 1500.000 0.000 NA   NA
 2020806 2020807 SFV_2091 SFV_2092 rfc rfbG FALSE 0.506 20.000 0.000 NA   NA
 2020807 2020808 SFV_2092 SFV_2093 rfbG rfbF TRUE 0.830 -7.000 0.077 NA   NA
 2020808 2020809 SFV_2093 SFV_2094 rfbF rfbE FALSE 0.102 159.000 0.000 NA   NA
 2020809 2020810 SFV_2094 SFV_2095 rfbE rfbC TRUE 0.591 16.000 0.000 1.000   NA
 2020810 2020811 SFV_2095 SFV_2096 rfbC rfbA TRUE 0.983 5.000 0.211 1.000 Y NA
 2020811 2020812 SFV_2096 SFV_2097 rfbA rfbD TRUE 0.875 59.000 0.053 0.002 Y NA
 2020812 2020813 SFV_2097 SFV_2098 rfbD rfbB TRUE 0.989 0.000 0.084 0.002 Y NA
 2020813 2020814 SFV_2098 SFV_2099 rfbB galF FALSE 0.084 373.000 0.000 1.000 Y NA
 2020814 1605072 SFV_2099 SFV_2100 galF wcaM FALSE 0.084 175.000 0.000 NA   NA
 1605072 2020815 SFV_2100 SFV_2101 wcaM wcaL TRUE 0.609 11.000 0.000 NA   NA
 2020815 2020816 SFV_2101 SFV_2102 wcaL wcaK TRUE 0.955 -3.000 0.095 0.009   NA
 2020816 2020817 SFV_2102 SFV_2103 wcaK wzxC FALSE 0.195 180.000 0.095 1.000   NA
 2020817 2020818 SFV_2103 SFV_2104 wzxC wcaJ TRUE 0.967 2.000 0.304 NA   NA
 2020818 1605077 SFV_2104 SFV_2105 wcaJ cpsG FALSE 0.028 254.000 0.000 NA   NA
 1605077 2020819 SFV_2105 SFV_2106 cpsG cpsB FALSE 0.064 193.000 0.000 NA   NA
 2020819 2020820 SFV_2106 SFV_2107 cpsB wcaI TRUE 0.786 120.000 0.123 1.000 Y NA
 2020820 2020821 SFV_2107 SFV_2108 wcaI wcaH TRUE 0.909 -3.000 0.108 1.000 N NA
 2020821 2020822 SFV_2108 SFV_2109 wcaH wcaG TRUE 0.958 0.000 0.217 1.000 N NA
 2020822 2020823 SFV_2109 SFV_2110 wcaG gmd TRUE 0.979 3.000 0.000 0.007 Y NA
 2020823 2020824 SFV_2110 SFV_2111 gmd wcaF FALSE 0.455 26.000 0.022 1.000   NA
 2020824 2020825 SFV_2111 SFV_2112 wcaF   TRUE 0.544 16.000 0.000 NA   NA
 2020827 2020828 SFV_2114 SFV_2115 wcaE wcaD TRUE 0.936 14.000 0.333 NA   NA
 2020828 2020829 SFV_2115 SFV_2116 wcaD wcaC TRUE 0.950 -25.000 0.400 NA   NA
 2020829 2020830 SFV_2116 SFV_2117 wcaC wcaB TRUE 0.966 -3.000 0.259 1.000 N NA
 2020830 2020831 SFV_2117 SFV_2118 wcaB wcaA TRUE 0.954 3.000 0.259 NA N NA
 2020831 2020832 SFV_2118 SFV_2119 wcaA   TRUE 0.701 93.000 0.000 NA Y NA
 2020832 2020833 SFV_2119 SFV_2120   wzb TRUE 0.738 3.000 0.000 1.000 N NA
 2020833 2020834 SFV_2120 SFV_2121 wzb wza TRUE 0.951 6.000 0.286 1.000 N NA
 2020836 2020837 SFV_2123 SFV_2124 asmA dcd TRUE 0.586 22.000 0.057 NA N NA
 2020837 2020838 SFV_2124 SFV_2125 dcd udk TRUE 0.794 92.000 0.098 1.000 Y NA
 2020838 2020839 SFV_2125 SFV_2126 udk   FALSE 0.004 708.000 0.000 1.000   NA
 2020840 2020841 SFV_2127 SFV_2128     TRUE 0.780 -3.000 0.000 NA   NA
 2020841 2020842 SFV_2128 SFV_2129     TRUE 0.984 -3.000 0.455 NA   NA
 2020845 2020846 SFV_2133 SFV_2134     TRUE 0.784 2.000 0.000 1.000   NA
 2020846 2020847 SFV_2134 SFV_2135   yegN TRUE 0.747 0.000 0.000 NA N NA
 2020847 2020848 SFV_2135 SFV_2136 yegN   FALSE 0.216 70.000 0.000 NA   NA
 2020848 2020849 SFV_2136 SFV_2137   yegO TRUE 0.853 1.000 0.062 NA   NA
 2020849 2020850 SFV_2137 SFV_2138 yegO yegB TRUE 0.799 107.000 0.438 1.000 N NA
 2020850 2020851 SFV_2138 SFV_2139 yegB baeS TRUE 0.924 -3.000 0.139 1.000 N NA
 2020851 2020852 SFV_2139 SFV_2140 baeS baeR TRUE 0.997 -3.000 0.591 1.000 Y NA
 2020852 2020853 SFV_2140 SFV_2141 baeR   FALSE 0.190 152.000 0.062 NA   NA
 2020853 2020854 SFV_2141 SFV_2142   yegQ TRUE 0.578 6.000 0.008 NA   NA
 2020857 1605118 SFV_2145 SFV_2146 gatR gatD FALSE 0.198 105.000 0.000 NA   NA
 1605118 2020858 SFV_2146 SFV_2147 gatD gatC FALSE 0.303 48.000 0.000 NA   NA
 2020858 2020859 SFV_2147 SFV_2148 gatC gatB TRUE 0.976 4.000 0.000 0.009 Y NA
 2020859 1605121 SFV_2148 SFV_2149 gatB gatA FALSE 0.404 31.000 0.000 NA   NA
 1605121 2020860 SFV_2149 SFV_2150 gatA gatZ TRUE 0.633 10.000 0.000 NA   NA
 2020860 2020861 SFV_2150 SFV_2151 gatZ gatY TRUE 0.930 29.000 0.000 0.001 Y NA
 2020861 2020862 SFV_2151 SFV_2152 gatY   FALSE 0.237 308.000 0.000 0.001 Y NA
 2020863 1605126 SFV_2153 SFV_2154 yegT   TRUE 0.780 -3.000 0.000 NA   NA
 1605126 2020864 SFV_2154 SFV_2155     TRUE 0.780 -3.000 0.000 NA   NA
 2020865 2020866 SFV_2156 SFV_2157 yegW yegX FALSE 0.306 48.000 0.000 1.000 N NA
 2020866 2020867 SFV_2157 SFV_2158 yegX thiD FALSE 0.234 65.000 0.000 1.000 N NA
 2020867 2020868 SFV_2158 SFV_2159 thiD thiM TRUE 0.984 -3.000 0.037 0.004 Y NA
 2020868 2020869 SFV_2159 SFV_2160 thiM yohL FALSE 0.042 223.000 0.000 NA   NA
 2020870 2020871 SFV_2161 SFV_2162 yohM   FALSE 0.044 219.000 0.000 NA   NA
 2020872 2020873 SFV_2163 SFV_2164 yehA yehB TRUE 0.544 16.000 0.000 NA   NA
 2020873 2020874 SFV_2164 SFV_2165 yehB yehC TRUE 0.995 16.000 1.000 1.000 Y NA
 2020874 2020875 SFV_2165 SFV_2166 yehC insB FALSE 0.255 59.000 0.000 1.000 N NA
 2020877 2020878 SFV_2168 SFV_2169 yehD mrp FALSE 0.003 836.000 0.000 1.000 N NA
 2020879 1605143 SFV_2170 SFV_2171 metG molR_1 FALSE 0.140 141.000 0.000 NA   NA
 1605143 2020880 SFV_2171 SFV_2172 molR_1   FALSE 0.418 -557.000 0.000 NA   NA
 2020880 2020881 SFV_2172 SFV_2173     FALSE 0.444 141.000 0.182 NA   NA
 2020881 1605146 SFV_2173 SFV_2174   molR_2 FALSE 0.003 792.000 0.000 NA   NA
 1605146 2020882 SFV_2174 SFV_2175 molR_2   FALSE 0.404 -934.000 0.000 NA   NA
 2020882 2020883 SFV_2175 SFV_2176     TRUE 0.633 10.000 0.000 NA   NA
 2020885 2020886 SFV_2178 SFV_2179   yehR FALSE 0.484 22.000 0.000 NA   NA
 2020887 2020888 SFV_2180 SFV_2181 yehS yehT TRUE 0.746 -10.000 0.051 NA   NA
 2020888 2020889 SFV_2181 SFV_2182 yehT yehU TRUE 0.999 -3.000 0.877 0.012 Y NA
 2020890 2020891 SFV_2183 SFV_2184     FALSE 0.008 398.000 0.000 NA   NA
 2020893 2020894 SFV_2186 SFV_2187   ipaH_5 FALSE 0.018 316.000 0.000 1.000   NA
 2020895 2020896 SFV_2188 SFV_2189     FALSE 0.469 -49.000 0.000 NA   NA
 2020896 2020897 SFV_2189 SFV_2190     FALSE 0.096 164.000 0.000 NA   NA
 2020897 2020898 SFV_2190 SFV_2191     TRUE 0.735 3.000 0.000 NA   NA
 2020899 2020900 SFV_2192 SFV_2193 insB   FALSE 0.034 238.000 0.000 1.000 N NA
 2020901 2020902 SFV_2194 SFV_2196 insB   FALSE 0.039 228.000 0.000 NA   NA
 2020904 2020905 SFV_2197 SFV_2198     FALSE 0.444 141.000 0.182 NA   NA
 2020906 1605172 SFV_2199 SFV_2200   yehV FALSE 0.210 75.000 0.000 NA   NA
 1605172 2020907 SFV_2200 SFV_2201 yehV   FALSE 0.416 -579.000 0.000 NA   NA
 2020907 2020908 SFV_2201 SFV_2202     TRUE 0.814 0.000 0.000 1.000   NA
 2020908 2020909 SFV_2202 SFV_2203     FALSE 0.005 558.000 0.000 NA   NA
 2020910 2020911 SFV_2204 SFV_2205 yehW yehX TRUE 0.994 5.000 0.542 1.000 Y NA
 2020911 2020912 SFV_2205 SFV_2206 yehX yehY TRUE 0.993 -7.000 0.489 1.000 Y NA
 2020912 2020913 SFV_2206 SFV_2207 yehY yehZ TRUE 0.985 7.000 0.521 0.049 N NA
 2020913 2020914 SFV_2207 SFV_2208 yehZ bglX FALSE 0.073 252.000 0.099 1.000 N NA
 2020916 2020917 SFV_2210 SFV_2211 pbpG yohC FALSE 0.248 174.000 0.145 NA   NA
 1605185 2020919 SFV_2213 SFV_2214 yohF yohG FALSE 0.279 53.000 0.000 NA   NA
 2020919 2020920 SFV_2214 SFV_2215 yohG yohI FALSE 0.005 588.000 0.000 1.000 N NA
 2020921 2020922 SFV_2216 SFV_2217 yohJ yohK TRUE 0.978 -3.000 0.340 1.000   NA
 2020922 2020923 SFV_2217 SFV_2218 yohK cdd FALSE 0.531 130.000 0.198 1.000 N NA
 2020923 2020924 SFV_2218 SFV_2219 cdd sanA FALSE 0.156 150.000 0.045 NA   NA
 2020924 2020925 SFV_2219 SFV_2220 sanA   TRUE 0.691 3.000 0.019 NA   NA
 2020925 2020926 SFV_2220 SFV_2221     FALSE 0.071 195.000 0.036 NA   NA
 2020926 1605194 SFV_2221 SFV_2222   yeiA TRUE 0.716 -6.000 0.000 NA   NA
 2020927 2020928 SFV_2223 SFV_2224 mglC mglA TRUE 0.994 16.000 0.905 1.000 Y NA
 2020928 2020929 SFV_2224 SFV_2225 mglA mglB TRUE 0.880 97.000 0.250 NA Y NA
 2020929 2020930 SFV_2225 SFV_2226 mglB galS FALSE 0.018 280.000 0.000 NA N NA
 2020930 2020931 SFV_2226 SFV_2227 galS yeiB TRUE 0.748 142.000 0.500 NA   NA
 2020931 2020932 SFV_2227 SFV_2228 yeiB folE TRUE 0.973 17.000 0.719 NA   NA
 2020934 2020935 SFV_2230 SFV_2231 cirA lysP FALSE 0.020 292.000 0.000 1.000 N NA
 2020935 2020936 SFV_2231 SFV_2232 lysP yeiE FALSE 0.023 275.000 0.000 1.000 N NA
 2020937 2020938 SFV_2233 SFV_2234 yeiH nfo FALSE 0.253 74.000 0.040 NA   NA
 2020938 2020939 SFV_2234 SFV_2235 nfo yeiI TRUE 0.551 3.000 0.004 NA N NA
 2020940 2020941 SFV_2236 SFV_2237 yeiJ yeiK TRUE 0.746 100.000 0.056 1.000 Y NA
 2020943 2020944 SFV_2239 SFV_2240 yeiM yeiN FALSE 0.175 94.000 0.000 NA N NA
 2020944 2020945 SFV_2240 SFV_2241 yeiN yeiC FALSE 0.461 -12.000 0.008 NA N NA
 2020945 2020946 SFV_2241 SFV_2242 yeiC fruA FALSE 0.060 424.000 0.000 NA Y NA
 2020946 2020947 SFV_2242 SFV_2243 fruA fruK TRUE 0.989 17.000 0.562 1.000 Y NA
 2020947 2020948 SFV_2243 SFV_2244 fruK fruB TRUE 0.982 0.000 0.112 1.000 Y NA
 2020950 2020951 SFV_2246 SFV_2248 insB insA TRUE 0.917 27.000 0.000 0.069 Y NA
 2020952 2020953 SFV_2247 SFV_2249   yeiP FALSE 0.100 161.000 0.000 NA   NA
 2020953 2020954 SFV_2249 SFV_2250 yeiP yeiQ FALSE 0.047 214.000 0.000 1.000 N NA
 2020954 2020955 SFV_2250 SFV_2251 yeiQ yeiR FALSE 0.490 118.000 0.167 NA   NA
 2020955 2020956 SFV_2251 SFV_2252 yeiR   TRUE 0.959 3.000 0.275 NA   NA
 2020956 2020957 SFV_2252 SFV_2253   spr FALSE 0.006 412.000 0.000 NA N NA
 2020957 2020958 SFV_2253 SFV_2254 spr rtn FALSE 0.160 244.000 0.219 NA N NA
 2020958 2020959 SFV_2254 SFV_2255 rtn yejA TRUE 0.779 82.000 0.394 NA N NA
 2020959 2020960 SFV_2255 SFV_2256 yejA yejB TRUE 0.995 1.000 0.848 0.048   NA
 2020960 2020