MicrobesOnline Operon Predictions for Vibrio cholerae V52

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 2506192 2506193 VCV52_A0525 VCV52_A0526     FALSE 0.048 -46.000 0.041 NA   NA
 2506193 2506194 VCV52_A0526 VCV52_A0527   ddlA FALSE 0.003 172.000 0.015 NA   NA
 2506194 2506195 VCV52_A0527 VCV52_A0528 ddlA   FALSE 0.006 151.000 0.007 NA   NA
 2506199 2506200 VCV52_A0532 VCV52_A0533     FALSE 0.002 370.000 0.000 1.000   NA
 2506200 2506201 VCV52_A0533 VCV52_A0534     FALSE 0.619 81.000 0.414 NA   NA
 2506207 2506208 VCV52_A0540 VCV52_A0541     TRUE 0.990 12.000 0.314 0.002 Y NA
 2506209 2506210 VCV52_A0542 VCV52_A0543     TRUE 0.736 -3.000 0.147 NA   NA
 2506211 2506212 VCV52_A0544 VCV52_A0545     TRUE 0.951 -3.000 0.758 1.000   NA
 2506212 2506213 VCV52_A0545 VCV52_A0546     TRUE 0.981 -3.000 0.833 0.058   NA
 2506213 2506214 VCV52_A0546 VCV52_A0547     TRUE 0.986 9.000 0.848 0.058   NA
 2506214 2506215 VCV52_A0547 VCV52_A0548     FALSE 0.017 196.000 0.121 1.000 N NA
 2506215 2506216 VCV52_A0548 VCV52_A0549     FALSE 0.213 54.000 0.109 NA   NA
 2506220 2506221 VCV52_A0553 VCV52_A0554     TRUE 0.684 66.000 0.478 NA   NA
 2506221 2506222 VCV52_A0554 VCV52_A0555     TRUE 0.854 25.000 0.609 1.000 N NA
 2506222 2506223 VCV52_A0555 VCV52_A0556     TRUE 0.957 -67.000 0.762 0.058 N NA
 2506223 2506224 VCV52_A0556 VCV52_A0557     FALSE 0.535 156.000 0.333 0.058 N NA
 2506225 2506226 VCV52_A0558 VCV52_A0559 phnW   TRUE 0.935 18.000 0.037 0.017 Y NA
 2506226 2506227 VCV52_A0559 VCV52_A0560   phnX FALSE 0.105 7.000 0.018 1.000   NA
 2506227 2506228 VCV52_A0560 VCV52_A0561 phnX   FALSE 0.004 165.000 0.030 1.000   NA
 2506230 2506231 VCV52_A0563 VCV52_A0564   elbB FALSE 0.103 5.000 0.028 NA   NA
 2506233 2506234 VCV52_A0566 VCV52_A0567   mscL FALSE 0.079 -3.000 0.007 NA   NA
 2506234 2506235 VCV52_A0567 VCV52_A0568 mscL   FALSE 0.028 33.000 0.007 NA   NA
 2506235 2506236 VCV52_A0568 VCV52_A0569   fhs TRUE 0.848 34.000 0.667 NA   NA
 2506236 2506237 VCV52_A0569 VCV52_A0570 fhs   FALSE 0.009 128.000 0.095 1.000 N NA
 2506239 2506240 VCV52_A0572 VCV52_A0573 moeA-2 moeB TRUE 0.990 3.000 0.323 0.004 Y NA
 2506240 2506241 VCV52_A0573 VCV52_A0574 moeB   FALSE 0.002 184.000 0.025 NA   NA
 2506241 2506242 VCV52_A0574 VCV52_A0575     FALSE 0.409 22.000 0.106 NA   NA
 2506244 2506245 VCV52_A0577 VCV52_A0578 talB tktA-2 FALSE 0.609 49.000 0.000 1.000 Y NA
 2506248 2506249 VCV52_A0581 VCV52_A0582     FALSE 0.016 200.000 0.000 NA   NA
 2506249 2506250 VCV52_A0582 VCV52_A0583     FALSE 0.181 41.000 0.000 NA   NA
 2506252 2506253 VCV52_A0585 VCV52_A0586     FALSE 0.388 13.000 0.087 NA   NA
 2506253 2506254 VCV52_A0586 VCV52_A0587     TRUE 0.843 16.000 0.087 0.066   NA
 2506254 2506255 VCV52_A0587 VCV52_A0588     TRUE 0.662 33.000 0.240 1.000   NA
 2506255 2506256 VCV52_A0588 VCV52_A0589   glpM FALSE 0.367 40.000 0.128 NA   NA
 2506256 2506257 VCV52_A0589 VCV52_A0590 glpM   FALSE 0.016 56.000 0.043 NA   NA
 2506258 2506259 VCV52_A0591 VCV52_A0593     FALSE 0.102 10.000 0.024 NA   NA
 2506260 2506261 VCV52_A0592 VCV52_A0594     TRUE 0.913 4.000 0.312 1.000   NA
 2506261 2506262 VCV52_A0594 VCV52_A0595     FALSE 0.001 216.000 0.000 NA N NA
 2506262 2506263 VCV52_A0595 VCV52_A0596     TRUE 0.862 2.000 0.259 NA N NA
 2506263 2506264 VCV52_A0596 VCV52_A0597     FALSE 0.283 110.000 0.159 NA   NA
 2506264 2506265 VCV52_A0597 VCV52_A0598     TRUE 0.848 5.000 0.188 NA   NA
 2506265 2506266 VCV52_A0598 VCV52_A0599     FALSE 0.550 17.000 0.115 NA   NA
 2506267 2506268 VCV52_A0600 VCV52_A0601     FALSE 0.015 66.000 0.031 NA   NA
 2506269 2506270 VCV52_A0602 VCV52_A0603     FALSE 0.041 116.000 0.077 NA   NA
 2506270 2506271 VCV52_A0603 VCV52_A0604     TRUE 0.700 -75.000 0.190 1.000   NA
 2506271 2506272 VCV52_A0604 VCV52_A0605     TRUE 0.908 11.000 0.312 NA   NA
 2506272 2506273 VCV52_A0605 VCV52_A0606     TRUE 0.937 0.000 0.488 NA   NA
 2506273 2506274 VCV52_A0606 VCV52_A0607     FALSE 0.561 89.000 0.341 NA   NA
 2506274 2506275 VCV52_A0607 VCV52_A0608     TRUE 0.917 -3.000 0.421 NA   NA
 2506278 2506279 VCV52_A0611 VCV52_A0612   cscA FALSE 0.013 76.000 0.070 1.000 N NA
 2506282 2506283 VCV52_A0615 VCV52_A0616     FALSE 0.031 186.000 0.130 1.000 N NA
 2506286 2506287 VCV52_A0619 VCV52_A0620   dcuC FALSE 0.000 394.000 0.000 1.000 N NA
 2506288 2506289 VCV52_A0621 VCV52_A0622 sdaA-2   TRUE 0.926 -49.000 0.300 1.000 Y NA
 2506292 2506293 VCV52_A0625 VCV52_A0626     FALSE 0.008 240.000 0.000 NA   NA
 2506294 2506295 VCV52_A0627 VCV52_A0628 narP narQ TRUE 0.939 -10.000 0.051 0.030 Y NA
 2506296 2506297 VCV52_A0629 VCV52_A0630 napF napD TRUE 0.870 6.000 0.209 NA   NA
 2506297 2506298 VCV52_A0630 VCV52_A0631 napD napA TRUE 0.881 -3.000 0.348 NA N NA
 2506298 2506299 VCV52_A0631 VCV52_A0632 napA napB TRUE 0.982 7.000 0.643 NA Y NA
 2506299 2506300 VCV52_A0632 VCV52_A0633 napB napC TRUE 0.930 18.000 0.245 NA Y NA
 2506300 2506301 VCV52_A0633 VCV52_A0634 napC   TRUE 0.950 12.000 0.667 NA   NA
 2506303 2506304 VCV52_A0636 VCV52_A0637 uhpA uhpB TRUE 0.994 3.000 0.900 0.030 Y NA
 2506304 2506305 VCV52_A0637 VCV52_A0638 uhpB uhpC TRUE 0.791 68.000 0.389 0.079 N NA
 2506305 2506306 VCV52_A0638 VCV52_A0639 uhpC   TRUE 0.657 113.000 0.259 0.058 N NA
 2506306 2506307 VCV52_A0639 VCV52_A0640     TRUE 0.924 104.000 0.667 0.058 Y NA
 2506307 2506308 VCV52_A0640 VCV52_A0641     TRUE 0.862 12.000 0.000 0.058 N NA
 2506309 2506310 VCV52_A0642 VCV52_A0643 phaC   FALSE 0.438 58.000 0.187 NA   NA
 2506310 2506311 VCV52_A0643 VCV52_A0644     TRUE 0.861 30.000 0.652 NA   NA
 2506311 2506312 VCV52_A0644 VCV52_A0645     TRUE 0.980 13.000 0.812 1.000 Y NA
 2506312 2506313 VCV52_A0645 VCV52_A0646   secF-2 FALSE 0.000 671.000 0.000 1.000 N NA
 2506313 2506314 VCV52_A0646 VCV52_A0647 secF-2 secD-2 TRUE 0.993 4.000 0.366 0.002 Y NA
 2506314 2506315 VCV52_A0647 VCV52_A0648 secD-2   FALSE 0.330 72.000 0.155 NA   NA
 2506315 2506316 VCV52_A0648 VCV52_A0649     FALSE 0.492 77.000 0.250 NA   NA
 2506317 2506318 VCV52_A0650 VCV52_A0651   glgC-2 FALSE 0.000 303.000 0.000 1.000 N NA
 2506320 2506321 VCV52_A0653 VCV52_A0654     FALSE 0.002 386.000 0.000 NA   NA
 2506321 2506322 VCV52_A0654 VCV52_A0656     FALSE 0.108 79.000 0.000 1.000   NA
 2506323 2506324 VCV52_A0655 VCV52_A0657     TRUE 0.898 -82.000 0.211 1.000 Y NA
 2506324 2506325 VCV52_A0657 VCV52_A0658     FALSE 0.232 -3.000 0.105 1.000 N NA
 2506325 2506326 VCV52_A0658 VCV52_A0659     FALSE 0.517 1.000 0.000 NA   NA
 2506327 2506328 VCV52_A0660 VCV52_A0661   pykA-2 TRUE 0.681 122.000 0.267 1.000 Y NA
 2506330 2506331 VCV52_A0663 VCV52_A0664 torT mgsA FALSE 0.514 55.000 0.049 NA Y NA
 2506332 2506333 VCV52_A0665 VCV52_A0666 pncA   FALSE 0.009 122.000 0.007 NA   NA
 2506334 2506335 VCV52_A0667 VCV52_A0668 dgkA   FALSE 0.055 140.000 0.089 NA   NA
 2506335 2506336 VCV52_A0668 VCV52_A0669     TRUE 0.923 -7.000 0.562 NA   NA
 2506339 2506340 VCV52_A0672 VCV52_A0673     FALSE 0.246 -3.000 0.077 1.000   NA
 2506341 2506342 VCV52_A0674 VCV52_A0675     FALSE 0.547 57.000 0.250 NA   NA
 2506342 2506343 VCV52_A0675 VCV52_A0676     FALSE 0.324 87.000 0.167 NA   NA
 2506344 2506345 VCV52_A0677 VCV52_A0678 modC modB TRUE 0.992 14.000 0.537 0.001 Y NA
 2506345 2506346 VCV52_A0678 VCV52_A0679 modB modA TRUE 0.976 1.000 0.035 0.001 Y NA
 2506346 2506347 VCV52_A0679 VCV52_A0680 modA cobQ FALSE 0.104 6.000 0.010 1.000 N NA
 2506347 2506348 VCV52_A0680 VCV52_A0681 cobQ   FALSE 0.001 774.000 0.000 NA   NA
 2506348 2506349 VCV52_A0681 VCV52_A0682     FALSE 0.004 300.000 0.000 NA   NA
 2506350 2506351 VCV52_A0683 VCV52_A0684     FALSE 0.011 217.000 0.000 NA   NA
 2506351 2506352 VCV52_A0684 VCV52_A0686     FALSE 0.016 199.000 0.000 NA   NA
 2506353 2506354 VCV52_A0685 VCV52_A0687 luxQ luxP FALSE 0.285 18.000 0.111 NA N NA
 2506354 2506355 VCV52_A0687 VCV52_A0688 luxP   FALSE 0.012 212.000 0.000 NA   NA
 2506355 2506356 VCV52_A0688 VCV52_A0689     FALSE 0.048 21.000 0.036 NA   NA
 2506356 2506357 VCV52_A0689 VCV52_A0690     FALSE 0.377 0.000 0.082 NA   NA
 2506357 2506358 VCV52_A0690 VCV52_A0691     FALSE 0.148 42.000 0.089 NA   NA
 2506358 2506359 VCV52_A0691 VCV52_A0692     TRUE 0.869 -7.000 0.308 NA   NA
 2506360 2506361 VCV52_A0693 VCV52_A0694     FALSE 0.155 0.000 0.066 NA   NA
 2506361 2506362 VCV52_A0694 VCV52_A0695     FALSE 0.006 264.000 0.000 NA   NA
 2506363 2506364 VCV52_A0696 VCV52_A0697 gplK glpF FALSE 0.008 130.000 0.032 1.000 N NA
 2506364 2506365 VCV52_A0697 VCV52_A0698 glpF   FALSE 0.003 338.000 0.000 NA   NA
 2506366 2506367 VCV52_A0699 VCV52_A0700 glpA glpB TRUE 0.983 -3.000 0.650 0.002 N NA
 2506367 2506368 VCV52_A0700 VCV52_A0701 glpB glpC TRUE 0.980 -3.000 0.547 0.002 N NA
 2506370 2506371 VCV52_A0703 VCV52_A0704 trxC   TRUE 0.892 -10.000 0.011 0.002   NA
 2506371 2506372 VCV52_A0704 VCV52_A0705     FALSE 0.002 189.000 0.047 1.000   NA
 2506375 2506376 VCV52_0814 VCV52_0813   recN FALSE 0.181 130.000 0.170 1.000 N NA
 2506376 2506377 VCV52_0813 VCV52_0812 recN smpA FALSE 0.011 108.000 0.049 1.000 N NA
 2506378 2506379 VCV52_0811 VCV52_0810     TRUE 0.668 -3.000 0.124 NA   NA
 2506380 2506381 VCV52_0809 VCV52_0808 smpB ssrA FALSE 0.126 69.000 0.000 NA   NA
 2506381 2506382 VCV52_0808 VCV52_0807 ssrA   FALSE 0.036 167.000 0.000 NA   NA
 2506382 2506383 VCV52_0807 VCV52_0806     FALSE 0.001 720.000 0.000 NA   NA
 2506386 2506387 VCV52_0803 VCV52_0802 tagE-1 acfC FALSE 0.001 498.000 0.000 NA   NA
 2506387 2506388 VCV52_0802 VCV52_0801 acfC acfB TRUE 0.970 6.000 1.000 NA   NA
 2506388 2506389 VCV52_0801 VCV52_0800 acfB tcpJ TRUE 0.971 7.000 0.333 1.000 Y NA
 2506389 2506390 VCV52_0800 VCV52_0799 tcpJ tcpN/toxT TRUE 0.890 0.000 0.333 1.000 N NA
 2506390 2506391 VCV52_0799 VCV52_0798 tcpN/toxT tcpF FALSE 0.014 207.000 0.000 NA   NA
 2506391 2506392 VCV52_0798 VCV52_0797 tcpF tcpE TRUE 0.931 10.000 0.375 NA   NA
 2506392 2506393 VCV52_0797 VCV52_0796 tcpE tcpT TRUE 0.963 -25.000 0.636 1.000 Y NA
 2506393 2506394 VCV52_0796 VCV52_0795 tcpT tcpS TRUE 0.884 -10.000 0.364 NA   NA
 2506394 2506395 VCV52_0795 VCV52_0794 tcpS tcpD TRUE 0.942 16.000 0.800 NA   NA
 2506395 2506396 VCV52_0794 VCV52_0793 tcpD tcpR TRUE 0.921 -12.000 0.600 NA   NA
 2506396 2506397 VCV52_0793 VCV52_0792 tcpR tcpC TRUE 0.881 -7.000 0.333 NA   NA
 2506397 2506398 VCV52_0792 VCV52_0791 tcpC tcpQ FALSE 0.017 720.000 0.583 NA   NA
 2506398 2506399 VCV52_0791 VCV52_0790 tcpQ tcpB TRUE 0.939 0.000 0.500 NA   NA
 2506399 2506400 VCV52_0790 VCV52_0789 tcpB tcpA TRUE 0.697 81.000 0.600 NA   NA
 2506400 2506401 VCV52_0789 VCV52_0788 tcpA tcpH FALSE 0.001 547.000 0.000 NA   NA
 2506401 2506402 VCV52_0788 VCV52_0787 tcpH tcpP TRUE 0.917 -15.000 0.600 NA   NA
 2506404 2506405 VCV52_0785 VCV52_0784 tagD   FALSE 0.011 110.000 0.007 1.000   NA
 2506405 2506406 VCV52_0784 VCV52_0783     FALSE 0.079 -3.000 0.015 NA   NA
 2506406 2506407 VCV52_0783 VCV52_0782   tagA FALSE 0.482 113.000 0.300 NA   NA
 2506408 2506409 VCV52_0781 VCV52_0780 aldA-1   FALSE 0.003 342.000 0.000 NA   NA
 2506409 2506410 VCV52_0780 VCV52_0779     FALSE 0.003 322.000 0.000 NA   NA
 2506412 2506413 VCV52_0777 VCV52_0776     FALSE 0.068 213.000 0.219 NA   NA
 2506413 2506414 VCV52_0776 VCV52_0775     FALSE 0.001 428.000 0.000 1.000   NA
 2506414 2506415 VCV52_0775 VCV52_0774     FALSE 0.482 1.000 0.093 1.000   NA
 2506415 2506416 VCV52_0774 VCV52_0773     FALSE 0.131 70.000 0.097 NA   NA
 2506417 2506418 VCV52_0772 VCV52_0771     FALSE 0.250 192.000 0.571 NA   NA
 2506422 2506423 VCV52_0767 VCV52_0766     FALSE 0.013 75.000 0.013 NA   NA
 2506423 2506424 VCV52_0766 VCV52_0765   citG FALSE 0.003 347.000 0.000 NA   NA
 2506424 2506425 VCV52_0765 VCV52_0764 citG citX TRUE 0.949 -22.000 0.400 1.000 Y NA
 2506425 2506426 VCV52_0764 VCV52_0763 citX citF FALSE 0.271 -3.000 0.108 1.000 N NA
 2506426 2506427 VCV52_0763 VCV52_0762 citF citE TRUE 0.896 -64.000 0.104 0.001 N NA
 2506427 2506428 VCV52_0762 VCV52_0761 citE citD TRUE 0.974 -18.000 0.537 0.001 N NA
 2506428 2506429 VCV52_0761 VCV52_0760 citD citC TRUE 0.673 52.000 0.128 1.000 Y NA
 2506430 2506431 VCV52_0759 VCV52_0758 citS   TRUE 0.902 -7.000 0.140 1.000 Y NA
 2506431 2506432 VCV52_0758 VCV52_0757   oadA-2 TRUE 0.995 1.000 0.720 0.002 Y NA
 2506432 2506433 VCV52_0757 VCV52_0756 oadA-2 oadB-2 TRUE 0.993 16.000 0.886 0.002 Y NA
 2506433 2506434 VCV52_0756 VCV52_0755 oadB-2 citA FALSE 0.242 71.000 0.159 1.000 N NA
 2506434 2506435 VCV52_0755 VCV52_0754 citA citB TRUE 0.981 14.000 1.000 1.000 Y NA
 2506436 2506437 VCV52_0753 VCV52_0752     FALSE 0.004 166.000 0.063 NA   NA
 2506437 2506438 VCV52_0752 VCV52_0751     FALSE 0.006 149.000 0.079 NA N NA
 2506439 2506440 VCV52_0750 VCV52_0749 dadA   FALSE 0.019 367.000 0.000 1.000 Y NA
 2506441 2506442 VCV52_0748 VCV52_0747     FALSE 0.001 218.000 0.000 1.000 N NA
 2506442 2506443 VCV52_0747 VCV52_0746   vibD TRUE 0.869 10.000 0.269 1.000 N NA
 2506443 2506444 VCV52_0746 VCV52_0745 vibD viuC FALSE 0.263 -69.000 0.115 1.000 N NA
 2506444 2506445 VCV52_0745 VCV52_0744 viuC viuG FALSE 0.600 117.000 0.173 1.000 Y NA
 2506445 2506446 VCV52_0744 VCV52_0743 viuG viuD TRUE 0.979 -21.000 0.447 0.057 Y NA
 2506446 2506447 VCV52_0743 VCV52_0742 viuD viuP TRUE 0.978 -3.000 0.739 1.000 Y NA
 2506450 2506451 VCV52_0739 VCV52_0738 vibC vibE TRUE 0.959 11.000 0.255 1.000 Y NA
 2506452 2506453 VCV52_0737 VCV52_0736 vibB   FALSE 0.003 312.000 0.000 NA   NA
 2506453 2506454 VCV52_0736 VCV52_0735     FALSE 0.058 191.000 0.143 NA   NA
 2506454 2506455 VCV52_0735 VCV52_0734   guaA FALSE 0.008 236.000 0.000 1.000   NA
 2506455 2506456 VCV52_0734 VCV52_0733 guaA guaB TRUE 0.898 107.000 0.190 0.001 Y NA
 2506458 2506459 VCV52_0732 VCV52_0730     FALSE 0.004 305.000 0.000 NA   NA
 2506459 2506460 VCV52_0730 VCV52_0729     FALSE 0.048 21.000 0.016 NA   NA
 2506460 2506461 VCV52_0729 VCV52_0728     FALSE 0.095 193.000 0.203 1.000   NA
 2506461 2506462 VCV52_0728 VCV52_0727     TRUE 0.924 13.000 0.492 1.000   NA
 2506462 2506463 VCV52_0727 VCV52_0726   hisS FALSE 0.651 37.000 0.259 1.000   NA
 2506463 2506464 VCV52_0726 VCV52_0725 hisS gcpE FALSE 0.591 26.000 0.207 1.000 N NA
 2506464 2506465 VCV52_0725 VCV52_0724 gcpE   TRUE 0.881 5.000 0.233 1.000   NA
 2506465 2506466 VCV52_0724 VCV52_0723     FALSE 0.001 215.000 0.020 1.000   NA
 2506466 2506467 VCV52_0723 VCV52_0722   ndk FALSE 0.095 174.000 0.156 1.000   NA
 2506467 2506468 VCV52_0722 VCV52_0721 ndk pepB FALSE 0.001 204.000 0.017 1.000 N NA
 2506468 2506469 VCV52_0721 VCV52_0720 pepB   FALSE 0.104 175.000 0.171 1.000   NA
 2506469 2506470 VCV52_0720 VCV52_0719     TRUE 0.771 49.000 0.625 1.000   NA
 2506470 2506471 VCV52_0719 VCV52_0718   hscA TRUE 0.919 -67.000 0.794 NA   NA
 2506472 2506473 VCV52_A0327 VCV52_A0328     FALSE 0.140 57.000 0.000 NA   NA
 2506473 2506474 VCV52_A0328 VCV52_A0329     TRUE 0.756 64.000 0.667 NA   NA
 2506474 2506475 VCV52_A0329 VCV52_A0330     FALSE 0.241 197.000 0.600 NA   NA
 2506475 2506476 VCV52_A0330 VCV52_A0331     FALSE 0.475 140.000 0.400 NA   NA
 2506476 2506477 VCV52_A0331 VCV52_A0332     FALSE 0.540 154.000 0.750 NA   NA
 2506477 2506478 VCV52_A0332 VCV52_A0333     FALSE 0.061 147.000 0.000 NA   NA
 2506478 2506479 VCV52_A0333 VCV52_A0334     FALSE 0.026 179.000 0.000 NA   NA
 2506479 2506480 VCV52_A0334 VCV52_A0335     FALSE 0.013 209.000 0.000 NA   NA
 2506480 2506481 VCV52_A0335 VCV52_A0336     FALSE 0.011 214.000 0.000 NA   NA
 2506481 2506482 VCV52_A0336 VCV52_A0337     FALSE 0.117 76.000 0.000 NA   NA
 2506482 2506483 VCV52_A0337 VCV52_A0338     FALSE 0.340 -40.000 0.000 NA   NA
 2506483 2506484 VCV52_A0338 VCV52_A0339     FALSE 0.002 357.000 0.000 NA   NA
 2506484 2506485 VCV52_A0339 VCV52_A0340     FALSE 0.023 184.000 0.000 NA   NA
 2506486 2506487 VCV52_A0341 VCV52_A0342     FALSE 0.059 -13.000 0.058 NA   NA
 2506488 2506489 VCV52_A0343 VCV52_A0344     FALSE 0.009 232.000 0.000 NA   NA
 2506489 2506490 VCV52_A0344 VCV52_A0345     FALSE 0.131 65.000 0.000 NA   NA
 2506490 2506491 VCV52_A0345 VCV52_A0346     TRUE 0.688 68.000 0.500 NA   NA
 2506491 2506492 VCV52_A0346 VCV52_A0347     FALSE 0.013 211.000 0.000 NA   NA
 2506492 2506493 VCV52_A0347 VCV52_A0348     TRUE 0.765 157.000 0.750 0.012   NA
 2506493 2506494 VCV52_A0348 VCV52_A0349     FALSE 0.586 148.000 0.750 NA   NA
 2506494 2506495 VCV52_A0349 VCV52_A0350     FALSE 0.003 316.000 0.000 NA   NA
 2506495 2506496 VCV52_A0350 VCV52_A0351     FALSE 0.001 593.000 0.000 NA   NA
 2506496 2506497 VCV52_A0351 VCV52_A0352     FALSE 0.511 131.000 0.400 NA   NA
 2506499 2506500 VCV52_A0354 VCV52_A0355     FALSE 0.184 196.000 0.400 NA   NA
 2506500 2506501 VCV52_A0355 VCV52_A0356     FALSE 0.619 125.000 0.600 NA   NA
 2506501 2506502 VCV52_A0356 VCV52_A0357     FALSE 0.482 163.000 0.750 NA   NA
 2506502 2506503 VCV52_A0357 VCV52_A0358     FALSE 0.353 183.000 0.750 NA   NA
 2506503 2506504 VCV52_A0358 VCV52_A0359     FALSE 0.005 281.000 0.000 NA   NA
 2506504 2506505 VCV52_A0359 VCV52_A0360     FALSE 0.001 761.000 0.000 NA   NA
 2506505 2506506 VCV52_A0360 VCV52_A0361     FALSE 0.632 119.000 0.600 NA   NA
 2506506 2506507 VCV52_A0361 VCV52_A0362     TRUE 0.764 69.000 0.750 NA   NA
 2506507 2506508 VCV52_A0362 VCV52_A0363     FALSE 0.074 135.000 0.000 NA   NA
 2506510 2506511 VCV52_A0365 VCV52_A0366     FALSE 0.013 208.000 0.000 NA   NA
 2506512 2506513 VCV52_A0367 VCV52_A0368     TRUE 0.956 -3.000 0.000 0.055 Y NA
 2506514 2506515 VCV52_A0369 VCV52_A0370     FALSE 0.140 57.000 0.000 NA   NA
 2506515 2506516 VCV52_A0370 VCV52_A0371     FALSE 0.119 74.000 0.000 NA   NA
 2506516 2506517 VCV52_A0371 VCV52_A0372     FALSE 0.102 92.000 0.000 NA   NA
 2506517 2506518 VCV52_A0372 VCV52_A0373     FALSE 0.331 -46.000 0.000 NA   NA
 2506518 2506519 VCV52_A0373 VCV52_A0374     FALSE 0.002 391.000 0.000 NA   NA
 2506519 2506520 VCV52_A0374 VCV52_A0375     FALSE 0.390 -12.000 0.000 NA   NA
 2506520 2506521 VCV52_A0375 VCV52_A0376     FALSE 0.041 162.000 0.000 NA   NA
 2506521 2506522 VCV52_A0376 VCV52_A0377     FALSE 0.005 285.000 0.000 NA   NA
 2506522 2506523 VCV52_A0377 VCV52_A0378     FALSE 0.003 316.000 0.000 NA   NA
 2506523 2506524 VCV52_A0378 VCV52_A0379     FALSE 0.057 149.000 0.000 NA   NA
 2506524 2506525 VCV52_A0379 VCV52_A0380     FALSE 0.067 140.000 0.000 NA   NA
 2506525 2506526 VCV52_A0380 VCV52_A0381     FALSE 0.136 61.000 0.000 NA   NA
 2506528 2506529 VCV52_A0383 VCV52_A0384     FALSE 0.001 775.000 0.000 NA   NA
 2506529 2506530 VCV52_A0384 VCV52_A0385     FALSE 0.257 27.000 0.000 NA   NA
 2506530 2506531 VCV52_A0385 VCV52_A0386     FALSE 0.092 114.000 0.000 NA   NA
 2506531 2506532 VCV52_A0386 VCV52_A0387     TRUE 0.697 132.000 1.000 NA   NA
 2506532 2506533 VCV52_A0387 VCV52_A0388     FALSE 0.317 189.000 0.750 NA   NA
 2506533 2506534 VCV52_A0388 VCV52_A0389     FALSE 0.404 174.000 0.750 NA   NA
 2506534 2506535 VCV52_A0389 VCV52_A0390     FALSE 0.485 154.000 0.600 NA   NA
 2506537 2506538 VCV52_A0392 VCV52_A0393     FALSE 0.299 194.000 0.750 NA   NA
 2506538 2506539 VCV52_A0393 VCV52_A0394     FALSE 0.002 385.000 0.000 NA   NA
 2506539 2506540 VCV52_A0394 VCV52_A0395   mccF-2 FALSE 0.021 188.000 0.000 NA   NA
 2506540 2506541 VCV52_A0395 VCV52_A0396 mccF-2   FALSE 0.001 719.000 0.000 NA   NA
 2506541 2506542 VCV52_A0396 VCV52_A0397     FALSE 0.591 135.000 0.600 NA   NA
 2506542 2506543 VCV52_A0397 VCV52_A0398     FALSE 0.136 61.000 0.000 NA   NA
 2506543 2506544 VCV52_A0398 VCV52_A0399   blc-4 FALSE 0.315 -88.000 0.000 NA   NA
 2506545 2506546 VCV52_A0400 VCV52_A0401     FALSE 0.345 0.000 0.080 NA   NA
 2506546 2506547 VCV52_A0401 VCV52_A0402     TRUE 0.907 -10.000 0.160 NA Y NA
 2506548 2506549 VCV52_A0403 VCV52_A0404     FALSE 0.620 73.000 0.375 NA   NA
 2506549 2506550 VCV52_A0404 VCV52_A0405     FALSE 0.131 65.000 0.000 NA   NA
 2506550 2506551 VCV52_A0405 VCV52_A0406     FALSE 0.013 208.000 0.000 NA   NA
 2506551 2506552 VCV52_A0406 VCV52_A0407     FALSE 0.001 819.000 0.000 NA   NA
 2506552 2506553 VCV52_A0407 VCV52_A0408     FALSE 0.575 156.000 1.000 NA   NA
 2506554 2506555 VCV52_A0409 VCV52_A0410   sbp FALSE 0.002 383.000 0.000 NA   NA
 2506556 2506557 VCV52_A0411 VCV52_A0412     FALSE 0.004 304.000 0.000 NA   NA
 2506559 2506560 VCV52_A0414 VCV52_A0415     FALSE 0.593 147.000 0.750 NA   NA
 2506560 2506561 VCV52_A0415 VCV52_A0416     FALSE 0.323 147.000 0.250 NA   NA
 2506561 2506562 VCV52_A0416 VCV52_A0417     TRUE 0.896 9.000 0.250 NA   NA
 2506562 2506563 VCV52_A0417 VCV52_A0418     TRUE 0.943 -18.000 1.000 NA   NA
 2506563 2506564 VCV52_A0418 VCV52_A0419     TRUE 0.654 131.000 0.750 NA   NA
 2506564 2506565 VCV52_A0419 VCV52_A0420     TRUE 0.897 25.000 0.750 NA   NA
 2506565 2506566 VCV52_A0420 VCV52_A0421     FALSE 0.001 1315.000 0.000 NA   NA
 2506566 2506567 VCV52_A0421 VCV52_A0422     FALSE 0.015 67.000 0.021 NA   NA
 2506567 2506568 VCV52_A0422 VCV52_A0423     TRUE 0.654 144.000 1.000 NA   NA
 2506568 2506569 VCV52_A0423 VCV52_A0424     FALSE 0.001 567.000 0.000 NA   NA
 2506569 2506570 VCV52_A0424 VCV52_A0425     FALSE 0.001 517.000 0.000 NA   NA
 2506570 2506571 VCV52_A0425 VCV52_A0426     TRUE 0.902 -13.000 0.600 NA N NA
 2506571 2506572 VCV52_A0426 VCV52_A0427     FALSE 0.008 137.000 0.020 1.000   NA
 2506572 2506573 VCV52_A0427 VCV52_A0428     FALSE 0.004 168.000 0.020 NA   NA
 2506575 2506576 VCV52_A0430 VCV52_A0431     FALSE 0.030 171.000 0.000 1.000   NA
 2506576 2506577 VCV52_A0431 VCV52_A0432   doc FALSE 0.487 0.000 0.000 1.000   NA
 2506577 2506578 VCV52_A0432 VCV52_A0433 doc   FALSE 0.002 188.000 0.013 1.000   NA
 2506578 2506579 VCV52_A0433 VCV52_A0434     FALSE 0.002 193.000 0.033 NA N NA
 2506579 2506580 VCV52_A0434 VCV52_A0435     TRUE 0.913 -13.000 0.185 NA Y NA
 2506580 2506581 VCV52_A0435 VCV52_A0436     FALSE 0.009 128.000 0.039 1.000   NA
 2506582 2506583 VCV52_A0437 VCV52_A0438     FALSE 0.035 169.000 0.000 NA   NA
 2506583 2506584 VCV52_A0438 VCV52_A0439     FALSE 0.445 -3.000 0.000 1.000   NA
 2506585 2506586 VCV52_A0440 VCV52_A0441     FALSE 0.052 152.000 0.000 NA   NA
 2506586 2506587 VCV52_A0441 VCV52_A0442     FALSE 0.066 141.000 0.000 NA   NA
 2506587 2506588 VCV52_A0442 VCV52_A0443     FALSE 0.129 67.000 0.000 NA   NA
 2506588 2506589 VCV52_A0443 VCV52_A0444     FALSE 0.445 -3.000 0.000 1.000   NA
 2506589 2506590 VCV52_A0444 VCV52_A0445     FALSE 0.015 202.000 0.000 NA   NA
 2506590 2506591 VCV52_A0445 VCV52_A0446     FALSE 0.390 -12.000 0.000 NA   NA
 2506591 2506592 VCV52_A0446 VCV52_A0447     TRUE 0.701 79.000 0.600 NA   NA
 2506592 2506593 VCV52_A0447 VCV52_A0448     TRUE 0.876 -75.000 0.500 NA   NA
 2506593 2506594 VCV52_A0448 VCV52_A0449     FALSE 0.120 73.000 0.000 NA   NA
 2506594 2506595 VCV52_A0449 VCV52_A0450     FALSE 0.104 91.000 0.000 NA   NA
 2506595 2506596 VCV52_A0450 VCV52_A0451     TRUE 0.703 61.000 0.500 NA   NA
 2506596 2506597 VCV52_A0451 VCV52_A0452   tnpA FALSE 0.166 44.000 0.000 NA   NA
 2506597 2506598 VCV52_A0452 VCV52_A0453 tnpA   FALSE 0.092 106.000 0.000 1.000   NA
 2506598 2506599 VCV52_A0453 VCV52_A0454     FALSE 0.231 175.000 0.333 NA   NA
 2506599 2506600 VCV52_A0454 VCV52_A0455     TRUE 0.685 69.000 0.500 NA   NA
 2506600 2506601 VCV52_A0455 VCV52_A0456     FALSE 0.022 186.000 0.000 NA   NA
 2506601 2506602 VCV52_A0456 VCV52_A0457     FALSE 0.426 -6.000 0.000 NA   NA
 2506602 2506603 VCV52_A0457 VCV52_A0458     FALSE 0.136 61.000 0.000 NA   NA
 2506603 2506604 VCV52_A0458 VCV52_A0459     FALSE 0.001 465.000 0.000 NA   NA
 2506604 2506605 VCV52_A0459 VCV52_A0460     TRUE 0.787 57.000 0.750 NA   NA
 2506607 2506608 VCV52_A0462 VCV52_A0463     FALSE 0.002 184.000 0.033 1.000 N NA
 2506608 2506609 VCV52_A0463 VCV52_A0464   orfA FALSE 0.000 519.000 0.000 1.000 N NA
 2506609 2506610 VCV52_A0464 VCV52_A0465 orfA orfB TRUE 0.956 -3.000 0.000 0.054 Y NA
 2506612 2506613 VCV52_A0467 VCV52_A0468   nrdD FALSE 0.001 463.000 0.000 1.000   NA
 2506613 2506614 VCV52_A0468 VCV52_A0469 nrdD nrdG TRUE 0.927 5.000 0.464 1.000 N NA
 2506614 2506615 VCV52_A0469 VCV52_A0470 nrdG   FALSE 0.009 122.000 0.054 1.000 N NA
 2506615 2506616 VCV52_A0470 VCV52_A0471     FALSE 0.511 58.000 0.288 1.000 N NA
 2506617 2506618 VCV52_A0472 VCV52_A0473   fruA-2 FALSE 0.024 38.000 0.025 NA   NA
 2506618 2506619 VCV52_A0473 VCV52_A0474 fruA-2 fruK TRUE 0.972 13.000 0.562 1.000 Y NA
 2506619 2506620 VCV52_A0474 VCV52_A0475 fruK fruB TRUE 0.926 11.000 0.130 1.000 Y NA
 2506621 2506622 VCV52_A0476 VCV52_A0477 fruR   FALSE 0.017 54.000 0.012 1.000 N NA
 2506622 2506623 VCV52_A0477 VCV52_A0478     TRUE 0.996 2.000 0.669 0.001 Y NA
 2506623 2506624 VCV52_A0478 VCV52_A0479   luxN FALSE 0.011 97.000 0.014 1.000 N NA
 2506625 2506626 VCV52_A0480 VCV52_A0481     FALSE 0.073 197.000 0.222 1.000 N NA
 2506626 2506627 VCV52_A0481 VCV52_A0482     FALSE 0.341 147.000 0.085 1.000 Y NA
 2506632 2506633 VCV52_A0487 VCV52_A0488     TRUE 0.918 -10.000 0.571 1.000   NA
 2506634 2506635 VCV52_1011 VCV52_1012   recR TRUE 0.931 15.000 0.604 NA   NA
 2506645 2506646 VCV52_1022 VCV52_1023     FALSE 0.014 831.000 0.529 NA   NA
 2506646 2506647 VCV52_1023 VCV52_1024     FALSE 0.000 542.000 0.000 1.000 N NA
 2506647 2506648 VCV52_1024 VCV52_1025   gap FALSE 0.011 97.000 0.096 1.000 N NA
 2506648 2506649 VCV52_1025 VCV52_1026 gap   TRUE 0.661 14.000 0.167 1.000 N NA
 2506649 2506650 VCV52_1026 VCV52_1027     FALSE 0.023 39.000 0.089 NA N NA
 2506650 2506651 VCV52_1027 VCV52_1028     FALSE 0.009 119.000 0.022 NA   NA
 2506651 2506652 VCV52_1028 VCV52_1029     FALSE 0.004 302.000 0.000 NA   NA
 2506654 2506655 VCV52_1031 VCV52_1032     TRUE 0.762 13.000 0.161 NA   NA
 2506656 2506657 VCV52_1033 VCV52_1034     FALSE 0.635 79.000 0.444 NA   NA
 2506657 2506658 VCV52_1034 VCV52_1035     FALSE 0.624 45.000 0.286 NA   NA
 2506659 2506660 VCV52_1036 VCV52_1037     TRUE 0.975 -3.000 0.600 NA Y NA
 2506660 2506661 VCV52_1037 VCV52_1038     TRUE 0.969 35.000 0.600 0.024 Y NA
 2506661 2506662 VCV52_1038 VCV52_1039     TRUE 0.980 -3.000 0.800 NA Y NA
 2506662 2506663 VCV52_1039 VCV52_1040     TRUE 0.822 29.000 0.467 NA   NA
 2506663 2506664 VCV52_1040 VCV52_1041     TRUE 0.975 12.000 0.400 0.015   NA
 2506664 2506665 VCV52_1041 VCV52_1042     TRUE 0.982 0.000 0.750 1.000 Y NA
 2506665 2506666 VCV52_1042 VCV52_1043     TRUE 0.990 17.000 0.857 0.023 Y NA
 2506667 2506668 VCV52_1044 VCV52_1045     TRUE 0.767 4.000 0.176 NA N NA
 2506669 2506670 VCV52_1046 VCV52_1047 oppA oppB FALSE 0.611 149.000 0.096 0.054 Y NA
 2506670 2506671 VCV52_1047 VCV52_1048 oppB oppC TRUE 0.991 14.000 0.870 0.054 Y NA
 2506671 2506672 VCV52_1048 VCV52_1049 oppC oppD TRUE 0.941 25.000 0.554 1.000 Y NA
 2506672 2506673 VCV52_1049 VCV52_1050 oppD oppF TRUE 0.962 -21.000 0.099 0.002 Y NA
 2506673 2506674 VCV52_1050 VCV52_1051 oppF   FALSE 0.008 150.000 0.100 1.000 N NA
 2506675 2506676 VCV52_1052 VCV52_1053 pta ackA-1 FALSE 0.598 136.000 0.634 1.000   NA
 2506679 2506680 VCV52_1056 VCV52_1057     TRUE 0.688 76.000 0.562 NA   NA
 2506680 2506681 VCV52_1057 VCV52_1058     TRUE 0.952 -3.000 0.771 1.000   NA
 2506681 2506682 VCV52_1058 VCV52_1059     FALSE 0.004 167.000 0.048 1.000   NA
 2506684 2506685 VCV52_1061 VCV52_1062   lolA FALSE 0.011 96.000 0.014 NA   NA
 2506685 2506686 VCV52_1062 VCV52_1063 lolA   FALSE 0.494 25.000 0.167 1.000 N NA
 2506686 2506687 VCV52_1063 VCV52_1064   serS FALSE 0.011 104.000 0.078 1.000 N NA
 2506689 2506690 VCV52_1066 VCV52_1067 bioB bioF TRUE 0.975 -16.000 0.168 0.002 Y NA
 2506690 2506691 VCV52_1067 VCV52_1068 bioF bioC TRUE 0.962 -138.000 0.133 0.002 Y NA
 2506691 2506692 VCV52_1068 VCV52_1069 bioC bioD TRUE 0.948 -24.000 0.028 0.002 Y NA
 2506694 2506695 VCV52_1071 VCV52_1072 htpX   TRUE 0.890 -3.000 0.019 0.006   NA
 2506695 2506696 VCV52_1072 VCV52_1073     FALSE 0.013 210.000 0.000 NA   NA
 2506696 2506697 VCV52_1073 VCV52_1074     TRUE 0.932 -3.000 0.533 NA   NA
 2506697 2506698 VCV52_1074 VCV52_1075     TRUE 0.960 11.000 0.217 0.025   NA
 2506698 2506699 VCV52_1075 VCV52_1076     TRUE 0.956 0.000 0.722 NA   NA
 2506699 2506700 VCV52_1076 VCV52_1077   cfa TRUE 0.819 -67.000 0.311 NA   NA
 2506700 2506701 VCV52_1077 VCV52_1078 cfa   TRUE 0.951 3.000 0.588 NA   NA
 2506701 2506702 VCV52_1078 VCV52_1079     TRUE 0.854 -67.000 0.387 NA   NA
 2506702 2506703 VCV52_1079 VCV52_1080     TRUE 0.914 -3.000 0.395 NA   NA
 2506704 2506705 VCV52_1081 VCV52_1082 purB   FALSE 0.133 58.000 0.093 NA   NA
 2506705 2506706 VCV52_1082 VCV52_1083   trmU TRUE 0.664 23.000 0.180 NA   NA
 2506709 2506710 VCV52_1086 VCV52_1087   hisG FALSE 0.000 391.000 0.000 1.000 N NA
 2506710 2506711 VCV52_1087 VCV52_1088 hisG hisD TRUE 0.985 5.000 0.171 0.004 Y NA
 2506711 2506712 VCV52_1088 VCV52_1089 hisD hisC TRUE 0.990 4.000 0.294 0.004 Y NA
 2506712 2506713 VCV52_1089 VCV52_1090 hisC hisB TRUE 0.945 52.000 0.341 0.004 Y NA
 2506713 2506714 VCV52_1090 VCV52_1091 hisB hisH TRUE 0.980 0.000 0.128 0.004 Y NA
 2506714 2506715 VCV52_1091 VCV52_1092 hisH hisA TRUE 0.933 43.000 0.210 0.004 Y NA
 2506715 2506716 VCV52_1092 VCV52_1093 hisA hisF TRUE 0.985 -18.000 0.433 0.004 Y NA
 2506716 2506717 VCV52_1093 VCV52_1094 hisF hisI TRUE 0.990 -3.000 0.430 0.004 Y NA
 2506721 2506722 VCV52_1098 VCV52_1099   clpA TRUE 0.807 39.000 0.596 NA   NA
 2506723 2506724 VCV52_1100 VCV52_1101   grxA FALSE 0.014 202.000 0.000 1.000   NA
 2506726 2506727 VCV52_1103 VCV52_1104     FALSE 0.000 308.000 0.000 1.000 N NA
 2506727 2506728 VCV52_1104 VCV52_1105     FALSE 0.387 110.000 0.212 NA   NA
 2506728 2506729 VCV52_1105 VCV52_1106     FALSE 0.036 93.000 0.071 NA   NA
 2506729 2506730 VCV52_1106 VCV52_1107     FALSE 0.474 21.000 0.113 NA   NA
 2506732 2506733 VCV52_1109 VCV52_1110     FALSE 0.203 191.000 0.412 NA   NA
 2506733 2506734 VCV52_1110 VCV52_1111     TRUE 0.981 -3.000 0.857 1.000 Y NA
 2506736 2506737 VCV52_A0948 VCV52_A0947     FALSE 0.220 131.000 0.150 NA   NA
 2506739 2506740 VCV52_A0945 VCV52_A0944 nemA grx2 TRUE 0.889 10.000 0.310 1.000 N NA
 2506744 2506745 VCV52_A0940 VCV52_A0939     FALSE 0.000 358.000 0.000 1.000 N NA
 2506745 2506746 VCV52_A0939 VCV52_A0938   ppsA FALSE 0.002 183.000 0.015 1.000 N NA
 2506748 2506749 VCV52_A0936 VCV52_A0935   lldD TRUE 0.807 98.000 0.145 0.045 Y NA
 2506749 2506750 VCV52_A0935 VCV52_A0934 lldD   FALSE 0.478 123.000 0.109 1.000 Y NA
 2506751 2506752 VCV52_A0933 VCV52_A0932     FALSE 0.153 154.000 0.192 1.000 N NA
 2506752 2506753 VCV52_A0932 VCV52_A0931     FALSE 0.016 794.000 0.192 1.000 Y NA
 2506753 2506754 VCV52_A0931 VCV52_A0930     TRUE 0.968 20.000 0.800 1.000 Y NA
 2506755 2506756 VCV52_A0929 VCV52_A0928     TRUE 0.922 14.000 0.500 NA   NA
 2506763 2506764 VCV52_A0921 VCV52_A0920     FALSE 0.093 0.000 0.011 NA   NA
 2506767 2506768 VCV52_A0917 VCV52_A0916     FALSE 0.099 152.000 0.150 1.000 N NA
 2506770 2506771 VCV52_A0914 VCV52_A0913     FALSE 0.030 287.000 0.235 NA   NA
 2506772 2506773 VCV52_A0912 VCV52_A0911     FALSE 0.035 26.000 0.051 NA   NA
 2506779 2506780 VCV52_A0905 VCV52_A0904 ppiC   FALSE 0.001 578.000 0.000 1.000   NA
 2506783 2506784 VCV52_A0901 VCV52_A0900   speG FALSE 0.103 5.000 0.041 NA N NA
 2506784 2506785 VCV52_A0900 VCV52_A0899 speG malK FALSE 0.001 222.000 0.000 1.000 N NA
 2506785 2506786 VCV52_A0899 VCV52_A0898 malK   FALSE 0.001 517.000 0.000 NA   NA
 2506787 2506788 VCV52_A0897 VCV52_A0896 malE malF FALSE 0.597 75.000 0.120 1.000 Y NA
 2506788 2506789 VCV52_A0896 VCV52_A0895 malF malG TRUE 0.992 12.000 0.814 0.053 Y NA
 2506790 2506791 VCV52_A0894 VCV52_A0893     FALSE 0.012 84.000 0.025 NA   NA
 2506791 2506792 VCV52_A0893 VCV52_A0892     FALSE 0.004 164.000 0.038 NA N NA
 2506792 2506793 VCV52_A0892 VCV52_A0891     FALSE 0.006 152.000 0.048 1.000 N NA
 2506793 2506794 VCV52_A0891 VCV52_A0890     FALSE 0.610 119.000 0.667 NA N NA
 2506796 2506797 VCV52_A0889 VCV52_A0887     FALSE 0.012 212.000 0.000 NA   NA
 2506797 2506798 VCV52_A0887 VCV52_A0886     FALSE 0.001 570.000 0.000 NA   NA
 2506799 2506800 VCV52_A0885 VCV52_A0884     FALSE 0.042 23.000 0.025 NA   NA
 2506800 2506801 VCV52_A0884 VCV52_A0883     FALSE 0.092 114.000 0.000 NA   NA
 2506802 2506803 VCV52_A0882 VCV52_A0881     TRUE 0.874 -3.000 0.273 NA   NA
 2506807 2506808 VCV52_A0877 VCV52_A0876     FALSE 0.533 63.000 0.250 NA   NA
 2506810 2506811 VCV52_A0874 VCV52_A0873     FALSE 0.015 203.000 0.000 NA   NA
 2506814 2506815 VCV52_A0863 VCV52_A0862   hutX TRUE 0.729 -54.000 0.203 NA   NA
 2506815 2506816 VCV52_A0862 VCV52_A0861 hutX hutZ TRUE 0.922 25.000 0.355 NA Y NA
 2506816 2506817 VCV52_A0861 VCV52_A0860 hutZ   FALSE 0.000 307.000 0.000 1.000 N NA
 2506817 2506818 VCV52_A0860 VCV52_A0859     FALSE 0.292 141.000 0.040 1.000 Y NA
 2506818 2506819 VCV52_A0859 VCV52_A0858     FALSE 0.040 159.000 0.120 1.000 N NA
 2506819 2506820 VCV52_A0858 VCV52_A0857     TRUE 0.852 19.000 0.109 1.000 Y NA
 2506820 2506821 VCV52_A0857 VCV52_A0856     FALSE 0.008 136.000 0.063 NA   NA
 2506822 2506823 VCV52_A0855 VCV52_A0854     TRUE 0.745 -6.000 0.169 1.000   NA
 2506823 2506824 VCV52_A0854 VCV52_A0853     FALSE 0.006 268.000 0.000 NA   NA
 2506824 2506825 VCV52_A0853 VCV52_A0852   gnd FALSE 0.005 156.000 0.009 NA   NA
 2506825 2506826 VCV52_A0852 VCV52_A0851 gnd pgl TRUE 0.963 14.000 0.039 0.002 Y NA
 2506826 2506827 VCV52_A0851 VCV52_A0850 pgl zwf TRUE 0.936 -3.000 0.188 1.000 Y NA
 2506827 2506828 VCV52_A0850 VCV52_A0849 zwf   FALSE 0.000 344.000 0.000 1.000 N NA
 2506829 2506830 VCV52_A0848 VCV52_A0847     TRUE 0.719 -49.000 0.245 1.000 N NA
 2506830 2506831 VCV52_A0847 VCV52_A0846     FALSE 0.229 106.000 0.132 NA   NA
 2506831 2506832 VCV52_A0846 VCV52_A0845     FALSE 0.470 112.000 0.286 NA   NA
 2506833 2506834 VCV52_A0844 VCV52_A0843     FALSE 0.070 -6.000 0.058 1.000 N NA
 2506834 2506835 VCV52_A0843 VCV52_A0842     TRUE 0.867 100.000 0.267 0.047 Y NA
 2506835 2506836 VCV52_A0842 VCV52_A0841     TRUE 0.764 -22.000 0.208 NA   NA
 2506837 2506838 VCV52_A0840 VCV52_A0839 kbl tdh TRUE 0.935 3.000 0.547 1.000 N NA
 2506839 2506840 VCV52_A0838 VCV52_A0837     TRUE 0.829 51.000 1.000 NA   NA
 2506840 2506841 VCV52_A0837 VCV52_A0836     TRUE 0.953 13.000 0.800 NA   NA
 2506841 2506842 VCV52_A0836 VCV52_A0835     TRUE 0.950 12.000 0.667 NA   NA
 2506842 2506843 VCV52_A0835 VCV52_A0834     TRUE 0.887 25.000 0.667 NA   NA
 2506843 2506844 VCV52_A0834 VCV52_A0833     FALSE 0.001 629.000 0.000 NA   NA
 2506844 2506845 VCV52_A0833 VCV52_A0832     FALSE 0.524 108.000 0.333 1.000   NA
 2506845 2506846 VCV52_A0832 VCV52_A0831   dsdC FALSE 0.000 300.000 0.000 1.000 N NA
 2506848 2506849 VCV52_A0829 VCV52_A0828   cydB-2 FALSE 0.001 822.000 0.000 NA   NA
 2506849 2506850 VCV52_A0828 VCV52_A0827 cydB-2 cydA-2 TRUE 0.988 13.000 0.500 0.044 Y NA
 2506852 2506853 VCV52_A0825 VCV52_A0824   pbpG FALSE 0.001 235.000 0.000 1.000 N NA
 2506853 2506854 VCV52_A0824 VCV52_A0823 pbpG   FALSE 0.001 531.000 0.000 NA   NA
 2506858 2506859 VCV52_A0819 VCV52_A0818     FALSE 0.002 361.000 0.000 NA   NA
 2506859 2506860 VCV52_A0818 VCV52_A0817   fadL-3 TRUE 0.687 16.000 0.146 NA   NA
 2506862 2506863 VCV52_A0815 VCV52_A0814   malS FALSE 0.047 -58.000 0.057 NA   NA
 2506866 2506867 VCV52_A0811 VCV52_A0810     TRUE 0.968 9.000 0.882 NA   NA
 2506867 2506868 VCV52_A0810 VCV52_A0809     TRUE 0.929 -12.000 0.824 NA N NA
 2506868 2506869 VCV52_A0809 VCV52_A0808     TRUE 0.958 11.000 0.737 NA   NA
 2506869 2506870 VCV52_A0808 VCV52_A0807     TRUE 0.952 5.000 0.579 NA   NA
 2506870 2506871 VCV52_A0807 VCV52_A0806     TRUE 0.904 1.000 0.293 NA   NA
 2506871 2506872 VCV52_A0806 VCV52_A0805     TRUE 0.765 160.000 0.317 0.027 Y NA
 2506872 2506873 VCV52_A0805 VCV52_A0804     FALSE 0.004 300.000 0.000 1.000   NA
 2506873 2506874 VCV52_A0804 VCV52_A0803     FALSE 0.461 131.000 0.333 1.000   NA
 2506877 2506878 VCV52_2141 VCV52_2142     FALSE 0.250 28.000 0.000 NA   NA
 2506878 2506879 VCV52_2142 VCV52_2143     FALSE 0.115 78.000 0.000 NA   NA
 2506879 2506880 VCV52_2143 VCV52_2144     FALSE 0.294 24.000 0.000 NA   NA
 2506880 2506881 VCV52_2144 VCV52_2145     FALSE 0.380 18.000 0.000 NA   NA
 2506881 2506882 VCV52_2145 VCV52_2146     FALSE 0.175 42.000 0.000 NA   NA
 2506882 2506883 VCV52_2146 VCV52_2147     FALSE 0.257 27.000 0.000 NA   NA
 2506883 2506884 VCV52_2147 VCV52_2148     FALSE 0.175 42.000 0.000 NA   NA
 2506884 2506885 VCV52_2148 VCV52_2149     FALSE 0.267 26.000 0.000 NA   NA
 2506885 2506886 VCV52_2149 VCV52_2150     FALSE 0.305 23.000 0.000 NA   NA
 2506886 2506887 VCV52_2150 VCV52_2151     FALSE 0.380 18.000 0.000 NA   NA
 2506887 2506888 VCV52_2151 VCV52_2152     FALSE 0.166 44.000 0.000 NA   NA
 2506888 2506889 VCV52_2152 VCV52_2153     FALSE 0.191 39.000 0.000 NA   NA
 2506889 2506890 VCV52_2153 VCV52_2154     FALSE 0.175 42.000 0.000 NA   NA
 2506891 2506892 VCV52_2155 VCV52_2156   flaC FALSE 0.004 164.000 0.000 1.000 N NA
 2506892 2506893 VCV52_2156 VCV52_2157 flaC flaA FALSE 0.047 555.000 0.000 0.002 Y NA
 2506893 2506894 VCV52_2157 VCV52_2158 flaA   FALSE 0.524 149.000 0.600 NA   NA
 2506894 2506895 VCV52_2158 VCV52_2159   flgL FALSE 0.110 80.000 0.094 NA   NA
 2506895 2506896 VCV52_2159 VCV52_2160 flgL flgK TRUE 0.985 13.000 0.182 0.001 Y NA
 2506896 2506897 VCV52_2160 VCV52_2161 flgK flgJ TRUE 0.828 180.000 0.705 0.002 Y NA
 2506897 2506898 VCV52_2161 VCV52_2162 flgJ flgI TRUE 0.991 11.000 0.405 0.009 Y NA
 2506898 2506899 VCV52_2162 VCV52_2163 flgI flgH TRUE 0.926 91.000 0.457 0.009 Y NA
 2506899 2506900 VCV52_2163 VCV52_2164 flgH flgG TRUE 0.993 15.000 0.909 0.006 Y NA
 2506900 2506901 VCV52_2164 VCV52_2165 flgG flgF TRUE 0.985 20.000 0.446 0.003 Y NA
 2506901 2506902 VCV52_2165 VCV52_2166 flgF flgE TRUE 0.770 183.000 0.594 0.005 Y NA
 2506902 2506903 VCV52_2166 VCV52_2167 flgE flgD TRUE 0.953 29.000 0.875 NA Y NA
 2506903 2506904 VCV52_2167 VCV52_2168 flgD flgC TRUE 0.958 18.000 0.478 NA Y NA
 2506904 2506905 VCV52_2168 VCV52_2169 flgC flgB TRUE 0.986 5.000 0.889 1.000 Y NA
 2506905 2506906 VCV52_2169 VCV52_2170 flgB cheR-2 FALSE 0.213 220.000 0.309 1.000 Y NA
 2506906 2506907 VCV52_2170 VCV52_2171 cheR-2 cheV-3 TRUE 0.984 11.000 0.838 1.000 Y NA
 2506908 2506909 VCV52_2172 VCV52_2173   flgM TRUE 0.726 131.000 0.371 NA Y NA
 2506909 2506910 VCV52_2173 VCV52_2174 flgM   TRUE 0.929 98.000 0.361 0.002 Y NA
 2506911 2506912 VCV52_2175 VCV52_2176     TRUE 0.899 8.000 0.260 NA   NA
 2506914 2506915 VCV52_2178 VCV52_2179 vibF viuB FALSE 0.001 246.000 0.000 NA N NA
 2506915 2506916 VCV52_2179 VCV52_2180 viuB viuA FALSE 0.032 304.000 0.000 NA Y NA
 2506918 2506919 VCV52_2182 VCV52_2183 ompA gltX FALSE 0.000 296.000 0.000 1.000 N NA
 2506920 2506921 VCV52_2184 VCV52_2185     TRUE 0.899 -3.000 0.333 NA   NA
 2506923 2506924 VCV52_2187 VCV52_2188     FALSE 0.005 271.000 0.000 NA   NA
 2506926 2506927 VCV52_2190 VCV52_2191     FALSE 0.102 182.000 0.182 NA   NA
 2506927 2506928 VCV52_2191 VCV52_2192     FALSE 0.402 30.000 0.120 NA   NA
 2506929 2506930 VCV52_2193 VCV52_2194     FALSE 0.111 83.000 0.000 NA   NA
 2506930 2506931 VCV52_2194 VCV52_2195   upp FALSE 0.348 20.000 0.000 NA   NA
 2506932 2506933 VCV52_2196 VCV52_2197 purM purN TRUE 0.989 3.000 0.230 0.002 Y NA
 2506934 2506935 VCV52_2198 VCV52_2199   lpcA FALSE 0.497 63.000 0.229 1.000   NA
 2506937 2506938 VCV52_2201 VCV52_2202   dnaQ FALSE 0.564 9.000 0.098 NA   NA
 2506941 2506942 VCV52_2205 VCV52_2206   mltD FALSE 0.014 72.000 0.020 1.000   NA
 2506943 2506944 VCV52_2207 VCV52_2208   glnB-2 FALSE 0.163 68.000 0.103 NA   NA
 2506944 2506945 VCV52_2208 VCV52_2209 glnB-2   FALSE 0.005 154.000 0.067 1.000 N NA
 2506945 2506946 VCV52_2209 VCV52_2210     FALSE 0.000 377.000 0.000 1.000 N NA
 2506946 2506947 VCV52_2210 VCV52_2211   tilS FALSE 0.025 36.000 0.015 1.000 N NA
 2506947 2506948 VCV52_2211 VCV52_2212 tilS accA FALSE 0.073 140.000 0.123 1.000 N NA
 2506948 2506949 VCV52_2212 VCV52_2213 accA dnaE FALSE 0.147 55.000 0.122 1.000 N NA
 2506949 2506950 VCV52_2213 VCV52_2214 dnaE rnhB TRUE 0.798 24.000 0.104 1.000 Y NA
 2506950 2506951 VCV52_2214 VCV52_2215 rnhB lpxB FALSE 0.556 25.000 0.186 1.000 N NA
 2506951 2506952 VCV52_2215 VCV52_2216 lpxB lpxA FALSE 0.518 161.000 0.289 1.000 Y NA
 2506952 2506953 VCV52_2216 VCV52_2217 lpxA fabZ TRUE 0.965 2.000 0.850 NA   NA
 2506954 2506955 VCV52_A1019 VCV52_A1018   putP FALSE 0.307 73.000 0.149 1.000   NA
 2506955 2506956 VCV52_A1018 VCV52_A1017 putP   FALSE 0.002 184.000 0.031 1.000   NA
 2506956 2506957 VCV52_A1017 VCV52_A1016     FALSE 0.003 343.000 0.000 1.000   NA
 2506957 2506958 VCV52_A1016 VCV52_A1015     FALSE 0.002 198.000 0.092 1.000 N NA
 2506958 2506959 VCV52_A1015 VCV52_A1014     FALSE 0.003 173.000 0.092 1.000 N NA
 2506959 2506960 VCV52_A1014 VCV52_A1013     FALSE 0.001 521.000 0.000 NA   NA
 2506962 2506963 VCV52_A1011 VCV52_A1010 speF potE TRUE 0.826 68.000 0.391 1.000 Y NA
 2506966 2506967 VCV52_A1007 VCV52_A1006     FALSE 0.405 94.000 0.214 NA   NA
 2506968 2506969 VCV52_A1005 VCV52_A1004     FALSE 0.002 394.000 0.000 1.000   NA
 2506971 2506972 VCV52_A1002 VCV52_A1001     FALSE 0.045 22.000 0.057 NA   NA
 2506972 2506973 VCV52_A1001 VCV52_A1000     FALSE 0.003 181.000 0.045 NA   NA
 2506973 2506974 VCV52_A1000 VCV52_A0998     FALSE 0.013 76.000 0.021 NA   NA
 2506977 2506978 VCV52_A0996 VCV52_A0995   mtlR FALSE 0.010 114.000 0.041 NA   NA
 2506978 2506979 VCV52_A0995 VCV52_A0994 mtlR mtlD FALSE 0.461 49.000 0.230 NA N NA
 2506979 2506980 VCV52_A0994 VCV52_A0993 mtlD mtlA TRUE 0.867 101.000 0.292 0.059 Y NA
 2506980 2506981 VCV52_A0993 VCV52_A0992 mtlA   FALSE 0.007 139.000 0.025 NA   NA
 2506982 2506983 VCV52_A0991 VCV52_A0990 tagE-2   FALSE 0.442 -90.000 0.111 NA   NA
 2506984 2506985 VCV52_A0989 VCV52_A0988     FALSE 0.010 113.000 0.018 1.000 N NA
 2506985 2506986 VCV52_A0988 VCV52_A0987     TRUE 0.993 1.000 0.771 0.052 Y NA
 2506986 2506987 VCV52_A0987 VCV52_A0986     TRUE 0.926 36.000 0.771 0.052 N NA
 2506987 2506988 VCV52_A0986 VCV52_A0985     TRUE 0.930 0.000 0.548 1.000 N NA
 2506991 2506992 VCV52_A0982 VCV52_A0981     TRUE 0.724 9.000 0.158 1.000 N NA
 2506992 2506993 VCV52_A0981 VCV52_A0980     FALSE 0.006 268.000 0.000 NA   NA
 2506994 2506995 VCV52_A0979 VCV52_A0978     FALSE 0.001 461.000 0.000 NA   NA
 2506995 2506996 VCV52_A0978 VCV52_A0977   glgX FALSE 0.008 135.000 0.059 NA   NA
 2506997 2506998 VCV52_A0976 VCV52_A0975 ompS   FALSE 0.055 205.000 0.171 1.000   NA
 2506998 2506999 VCV52_A0975 VCV52_A0974     FALSE 0.139 153.000 0.143 1.000   NA
 2507002 2507003 VCV52_A0971 VCV52_A0970     FALSE 0.013 79.000 0.052 NA   NA
 2507006 2507007 VCV52_A0967 VCV52_A0966   ogt TRUE 0.990 1.000 0.217 0.001 Y NA
 2507007 2507008 VCV52_A0966 VCV52_A0965 ogt   TRUE 0.788 11.000 0.156 NA   NA
 2507010 2507011 VCV52_A0963 VCV52_A0962     TRUE 0.957 -3.000 0.159 0.002   NA
 2507012 2507013 VCV52_A0961 VCV52_A0960     FALSE 0.034 27.000 0.035 NA N NA
 2507013 2507014 VCV52_A0960 VCV52_A0959     TRUE 0.729 16.000 0.167 NA   NA
 2507014 2507015 VCV52_A0959 VCV52_A0958     TRUE 0.712 26.000 0.235 NA   NA
 2507015 2507016 VCV52_A0958 VCV52_A0957     FALSE 0.001 256.000 0.000 1.000 N NA
 2507017 2507018 VCV52_A0956 VCV52_A0955     FALSE 0.010 116.000 0.036 1.000 N NA
 2507019 2507020 VCV52_A0954 VCV52_A0953     TRUE 0.944 -3.000 0.651 NA   NA
 2507020 2507021 VCV52_A0953 VCV52_A0952     FALSE 0.438 152.000 0.581 NA N NA
 2507026 2507027 VCV52_2703 VCV52_2702 rrfI   FALSE 0.294 24.000 0.000 NA   NA
 2507028 2507029 VCV52_2701 VCV52_2700 add   FALSE 0.277 92.000 0.189 1.000 N NA
 2507029 2507030 VCV52_2700 VCV52_2699   ntrC FALSE 0.573 41.000 0.046 1.000 Y NA
 2507030 2507031 VCV52_2699 VCV52_2698 ntrC ntrB TRUE 0.991 4.000 0.587 0.082 Y NA
 2507031 2507032 VCV52_2698 VCV52_2697 ntrB   FALSE 0.288 133.000 0.188 NA   NA
 2507032 2507033 VCV52_2697 VCV52_2696   glnA FALSE 0.003 178.000 0.044 NA   NA
 2507033 2507034 VCV52_2696 VCV52_2695 glnA   FALSE 0.007 143.000 0.007 NA   NA
 2507035 2507036 VCV52_2694 VCV52_2693 typA   FALSE 0.012 83.000 0.013 1.000   NA
 2507036 2507037 VCV52_2693 VCV52_2692   yihY FALSE 0.034 27.000 0.020 1.000   NA
 2507037 2507038 VCV52_2692 VCV52_2691 yihY   FALSE 0.121 18.000 0.069 1.000   NA
 2507038 2507039 VCV52_2691 VCV52_2690     FALSE 0.015 67.000 0.065 1.000   NA
 2507040 2507041 VCV52_2689 VCV52_2688   pckA FALSE 0.002 187.000 0.027 NA   NA
 2507041 2507042 VCV52_2688 VCV52_2687 pckA   FALSE 0.000 337.000 0.048 1.000 N NA
 2507042 2507043 VCV52_2687 VCV52_2686     FALSE 0.486 19.000 0.140 1.000 N NA
 2507044 2507045 VCV52_2685 VCV52_2684 epsC gspD TRUE 0.963 46.000 0.575 0.005 Y NA
 2507045 2507046 VCV52_2684 VCV52_2683 gspD epsE TRUE 0.993 -3.000 0.776 0.005 Y NA
 2507046 2507047 VCV52_2683 VCV52_2682 epsE epsF TRUE 0.993 0.000 0.653 0.005 Y NA
 2507047 2507048 VCV52_2682 VCV52_2681 epsF epsG TRUE 0.969 41.000 0.599 0.005 Y NA
 2507048 2507049 VCV52_2681 VCV52_2680 epsG epsH TRUE 0.906 34.000 0.087 0.005 Y NA
 2507049 2507050 VCV52_2680 VCV52_2679 epsH epsI TRUE 0.927 -10.000 0.132 0.005   NA
 2507050 2507051 VCV52_2679 VCV52_2678 epsI epsJ TRUE 0.974 -13.000 0.569 0.005   NA
 2507051 2507052 VCV52_2678 VCV52_2677 epsJ epsK TRUE 0.960 -10.000 0.461 1.000 Y NA
 2507052 2507053 VCV52_2677 VCV52_2676 epsK epsL TRUE 0.978 -43.000 0.537 0.071 Y NA
 2507053 2507054 VCV52_2676 VCV52_2675 epsL epsM TRUE 0.985 7.000 0.811 1.000 Y NA
 2507054 2507055 VCV52_2675 VCV52_2674 epsM epsN TRUE 0.954 2.000 0.649 1.000   NA
 2507056 2507057 VCV52_2673 VCV52_2672 cysQ   TRUE 0.817 -55.000 0.373 1.000 N NA
 2507057 2507058 VCV52_2672 VCV52_2671     FALSE 0.014 73.000 0.059 1.000   NA
 2507058 2507059 VCV52_2671 VCV52_2670     FALSE 0.018 88.000 0.066 1.000   NA
 2507059 2507060 VCV52_2670 VCV52_2669     FALSE 0.043 -372.000 0.004 1.000   NA
 2507061 2507062 VCV52_2668 VCV52_2667 bioH   FALSE 0.008 135.000 0.053 NA   NA
 2507064 2507065 VCV52_2665 VCV52_2664 greB ompR FALSE 0.630 138.000 0.067 0.052 Y NA
 2507065 2507066 VCV52_2664 VCV52_2663 ompR envZ TRUE 0.862 69.000 0.584 1.000 Y NA
 2507067 2507068 VCV52_2662 VCV52_2661   recG FALSE 0.000 345.000 0.009 1.000 N NA
 2507068 2507069 VCV52_2661 VCV52_2660 recG spoT FALSE 0.348 119.000 0.034 1.000 Y NA
 2507069 2507070 VCV52_2660 VCV52_2659 spoT rpoZ TRUE 0.880 32.000 0.291 1.000 Y NA
 2507070 2507071 VCV52_2659 VCV52_2658 rpoZ gmk FALSE 0.549 108.000 0.471 1.000 N NA
 2507073 2507074 VCV52_2656 VCV52_2655     TRUE 0.965 11.000 0.916 NA   NA
 2507076 2507077 VCV52_2653 VCV52_2652   dsbD FALSE 0.003 173.000 0.084 1.000 N NA
 2507077 2507078 VCV52_2652 VCV52_2651 dsbD pulA FALSE 0.004 160.000 0.048 1.000   NA
 2507078 2507079 VCV52_2651 VCV52_2650 pulA   TRUE 0.874 -3.000 0.042 0.017   NA
 2507079 2507080 VCV52_2650 VCV52_2649   dcuA FALSE 0.002 394.000 0.000 1.000   NA
 2507080 2507081 VCV52_2649 VCV52_2648 dcuA aspA FALSE 0.395 80.000 0.195 1.000   NA
 2507082 2507083 VCV52_2647 VCV52_2646   fsxA FALSE 0.011 92.000 0.017 NA   NA
 2507084 2507085 VCV52_2645 VCV52_2644   sodA FALSE 0.017 53.000 0.045 1.000 N NA
 2507085 2507086 VCV52_2644 VCV52_2643 sodA cpxA FALSE 0.231 82.000 0.162 1.000 N NA
 2507086 2507087 VCV52_2643 VCV52_2642 cpxA cpxR TRUE 0.983 0.000 0.791 1.000 Y NA
 2507088 2507089 VCV52_2241 VCV52_2242     FALSE 0.494 134.000 0.381 NA   NA
 2507089 2507090 VCV52_2242 VCV52_2243   gpt FALSE 0.251 97.000 0.140 NA   NA
 2507090 2507091 VCV52_2243 VCV52_2244 gpt   FALSE 0.042 38.000 0.067 1.000   NA
 2507092 2507093 VCV52_2245 VCV52_2246 pepD   FALSE 0.066 234.000 0.000 0.030 N NA
 2507093 2507094 VCV52_2246 VCV52_2247   rimK FALSE 0.313 -3.000 0.109 1.000 N NA
 2507094 2507095 VCV52_2247 VCV52_2248 rimK   FALSE 0.380 -40.000 0.102 1.000   NA
 2507096 2507097 VCV52_2249 VCV52_2250     FALSE 0.412 157.000 0.500 1.000   NA
 2507097 2507098 VCV52_2250 VCV52_2251     FALSE 0.361 64.000 0.158 NA   NA
 2507098 2507099 VCV52_2251 VCV52_2252   dinP FALSE 0.007 246.000 0.000 NA   NA
 2507099 2507100 VCV52_2252 VCV52_2253 dinP   FALSE 0.011 109.000 0.063 NA   NA
 2507100 2507101 VCV52_2253 VCV52_2254   apbE TRUE 0.904 17.000 0.481 NA   NA
 2507101 2507102 VCV52_2254 VCV52_2255 apbE nqrF TRUE 0.701 47.000 0.519 1.000 N NA
 2507102 2507103 VCV52_2255 VCV52_2256 nqrF nqrE TRUE 0.977 34.000 0.551 0.002 Y NA
 2507103 2507104 VCV52_2256 VCV52_2257 nqrE nqrD TRUE 0.988 8.000 0.188 0.002 Y NA
 2507104 2507105 VCV52_2257 VCV52_2258 nqrD nqrC TRUE 0.991 0.000 0.312 0.002 Y NA
 2507105 2507106 VCV52_2258 VCV52_2259 nqrC nqrB TRUE 0.990 -13.000 0.603 0.002 Y NA
 2507106 2507107 VCV52_2259 VCV52_2260 nqrB nqrA TRUE 0.996 6.000 0.854 0.002 Y NA
 2507107 2507108 VCV52_2260 VCV52_2261 nqrA bolA FALSE 0.000 437.000 0.000 NA N NA
 2507109 2507110 VCV52_2262 VCV52_2263     TRUE 0.818 -3.000 0.248 1.000 N NA
 2507110 2507111 VCV52_2263 VCV52_2264   ppiA FALSE 0.646 -43.000 0.198 1.000 N NA
 2507111 2507112 VCV52_2264 VCV52_2265 ppiA   TRUE 0.669 69.000 0.467 1.000   NA
 2507113 2507114 VCV52_2266 VCV52_2267     TRUE 0.949 -3.000 0.898 NA N NA
 2507114 2507115 VCV52_2267 VCV52_2268     FALSE 0.040 91.000 0.077 1.000   NA
 2507116 2507117 VCV52_2269 VCV52_2270 ompK panE FALSE 0.007 139.000 0.011 1.000 N NA
 2507117 2507118 VCV52_2270 VCV52_2271 panE thiJ TRUE 0.754 -3.000 0.155 NA   NA
 2507118 2507119 VCV52_2271 VCV52_2272 thiJ   FALSE 0.057 -16.000 0.048 NA   NA
 2507120 2507121 VCV52_2273 VCV52_2274     TRUE 0.713 5.000 0.122 1.000   NA
 2507121 2507122 VCV52_2274 VCV52_2275   mltA FALSE 0.011 92.000 0.018 1.000 N NA
 2507122 2507123 VCV52_2275 VCV52_2276 mltA   FALSE 0.122 71.000 0.000 NA   NA
 2507124 2507125 VCV52_2277 VCV52_2278 argA   FALSE 0.009 227.000 0.000 NA   NA
 2507126 2507127 VCV52_2279 VCV52_2280 recD recB TRUE 0.994 -3.000 0.688 0.001 Y NA
 2507127 2507128 VCV52_2280 VCV52_2281 recB recC FALSE 0.503 265.000 0.542 0.001 Y NA
 2507128 2507129 VCV52_2281 VCV52_2282 recC   FALSE 0.001 252.000 0.000 1.000 N NA
 2507130 2507131 VCV52_2283 VCV52_2284     FALSE 0.295 116.000 0.173 NA   NA
 2507131 2507132 VCV52_2284 VCV52_2285   dapD FALSE 0.004 308.000 0.000 NA   NA
 2507133 2507134 VCV52_2286 VCV52_2287     FALSE 0.011 103.000 0.044 1.000   NA
 2507135 2507136 VCV52_2288 VCV52_2289     FALSE 0.015 64.000 0.047 1.000 N NA
 2507136 2507137 VCV52_2289 VCV52_2291     FALSE 0.051 20.000 0.056 NA   NA
 2507141 2507142 VCV52_2294 VCV52_2295     FALSE 0.008 136.000 0.052 NA N NA
 2507142 2507143 VCV52_2295 VCV52_2296     FALSE 0.019 200.000 0.125 NA N NA
 2507145 2507146 VCV52_1314 VCV52_1312     FALSE 0.445 -3.000 0.000 1.000   NA
 2507146 2507147 VCV52_1312 VCV52_1311     FALSE 0.037 166.000 0.000 NA   NA
 2507147 2507148 VCV52_1311 VCV52_1310     FALSE 0.074 135.000 0.000 NA   NA
 2507148 2507149 VCV52_1310 VCV52_1309     FALSE 0.152 49.000 0.000 NA   NA
 2507149 2507150 VCV52_1309 VCV52_1308     FALSE 0.124 70.000 0.000 NA   NA
 2507150 2507151 VCV52_1308 VCV52_1307     FALSE 0.363 19.000 0.000 NA   NA
 2507151 2507152 VCV52_1307 VCV52_1306     FALSE 0.384 -13.000 0.000 NA   NA
 2507152 2507153 VCV52_1306 VCV52_B0059     FALSE 0.002 402.000 0.000 NA   NA
 2507153 2507154 VCV52_B0059 VCV52_1305     FALSE 0.315 -88.000 0.000 NA   NA
 2507154 2507155 VCV52_1305 VCV52_1304     FALSE 0.461 -3.000 0.000 NA   NA
 2507155 2507156 VCV52_1304 VCV52_1303     FALSE 0.524 3.000 0.000 NA   NA
 2507156 2507157 VCV52_1303 VCV52_1302     FALSE 0.117 239.000 0.571 1.000   NA
 2507157 2507158 VCV52_1302 VCV52_1301     FALSE 0.537 7.000 0.000 NA   NA
 2507158 2507159 VCV52_1301 VCV52_1300     FALSE 0.521 2.000 0.000 NA   NA
 2507159 2507160 VCV52_1300 VCV52_B0065     FALSE 0.010 218.000 0.000 NA   NA
 2507160 2507161 VCV52_B0065 VCV52_B0066     TRUE 0.930 -10.000 0.667 NA   NA
 2507165 2507166 VCV52_1297 VCV52_1295 maiA   TRUE 0.909 -3.000 0.495 1.000 N NA
 2507166 2507167 VCV52_1295 VCV52_1294     TRUE 0.953 7.000 0.195 1.000 Y NA
 2507167 2507168 VCV52_1294 VCV52_1293   hppD FALSE 0.389 -7.000 0.119 1.000 N NA
 2507170 2507171 VCV52_1291 VCV52_1290     TRUE 0.838 30.000 0.556 1.000   NA
 2507171 2507172 VCV52_1290 VCV52_1289   prpE FALSE 0.153 174.000 0.045 0.058   NA
 2507172 2507173 VCV52_1289 VCV52_1288 prpE prpF FALSE 0.057 -16.000 0.063 NA   NA
 2507173 2507174 VCV52_1288 VCV52_1287 prpF acnA TRUE 0.962 9.000 0.733 NA   NA
 2507174 2507175 VCV52_1287 VCV52_1286 acnA prpC TRUE 0.724 110.000 0.289 1.000 Y NA
 2507175 2507176 VCV52_1286 VCV52_1285 prpC prpB FALSE 0.254 177.000 0.502 1.000 N NA
 2507176 2507177 VCV52_1285 VCV52_1284 prpB   FALSE 0.055 -19.000 0.063 1.000 N NA
 2507178 2507179 VCV52_1283 VCV52_1282     FALSE 0.124 251.000 0.690 NA   NA
 2507179 2507180 VCV52_1282 VCV52_1281     TRUE 0.966 10.000 0.844 NA   NA
 2507181 2507182 VCV52_1280 VCV52_1279     FALSE 0.003 321.000 0.000 NA   NA
 2507182 2507183 VCV52_1279 VCV52_1278   mglC FALSE 0.002 410.000 0.000 1.000   NA
 2507183 2507184 VCV52_1278 VCV52_1277 mglC mglA TRUE 0.996 5.000 0.905 0.002 Y NA
 2507187 2507188 VCV52_1274 VCV52_1273     TRUE 0.845 -21.000 0.314 NA   NA
 2507190 2507191 VCV52_1271 VCV52_1270     FALSE 0.038 365.000 0.189 1.000 Y NA
 2507191 2507192 VCV52_1270 VCV52_1269   ompV FALSE 0.001 213.000 0.000 NA N NA
 2507192 2507193 VCV52_1269 VCV52_1268 ompV   FALSE 0.535 98.000 0.333 NA   NA
 2507194 2507195 VCV52_1267 VCV52_1266     TRUE 0.965 -31.000 0.688 1.000 Y NA
 2507195 2507196 VCV52_1266 VCV52_1265     TRUE 0.926 10.000 0.464 1.000 N NA
 2507197 2507198 VCV52_1264 VCV52_1263     TRUE 0.797 49.000 0.909 1.000 N NA
 2507198 2507199 VCV52_1263 VCV52_1262     FALSE 0.531 121.000 0.385 NA   NA
 2507200 2507201 VCV52_1261 VCV52_1260   rimJ FALSE 0.011 95.000 0.061 NA   NA
 2507201 2507202 VCV52_1260 VCV52_1259 rimJ tyrR FALSE 0.504 0.000 0.122 1.000 N NA
 2507202 2507203 VCV52_1259 VCV52_1258 tyrR   FALSE 0.382 42.000 0.137 NA   NA
 2507203 2507204 VCV52_1258 VCV52_1257     TRUE 0.953 -3.000 0.791 NA   NA
 2507204 2507205 VCV52_1257 VCV52_1256     FALSE 0.001 225.000 0.026 NA   NA
 2507205 2507206 VCV52_1256 VCV52_1255     FALSE 0.006 149.000 0.027 NA   NA
 2507207 2507208 VCV52_1254 VCV52_1253 pabB   FALSE 0.043 197.000 0.169 1.000 N NA
 2507208 2507209 VCV52_1253 VCV52_1252   sdaC-1 FALSE 0.000 299.000 0.049 1.000 N NA
 2507209 2507210 VCV52_1252 VCV52_1251 sdaC-1   TRUE 0.656 93.000 0.567 NA   NA
 2507214 2507215 VCV52_1534 VCV52_1533 bglA   TRUE 0.727 36.000 0.429 1.000 N NA
 2507217 2507218 VCV52_1531 VCV52_1530     TRUE 0.833 11.000 0.231 NA N NA
 2507219 2507220 VCV52_1529 VCV52_1528   glpR TRUE 0.681 28.000 0.286 1.000 N NA
 2507220 2507221 VCV52_1528 VCV52_1527 glpR ugpC TRUE 0.717 25.000 0.056 1.000 Y NA
 2507221 2507222 VCV52_1527 VCV52_1526 ugpC ugpE TRUE 0.963 -10.000 0.160 0.051 Y NA
 2507222 2507223 VCV52_1526 VCV52_1525 ugpE ugpA TRUE 0.994 10.000 0.840 0.051 Y NA
 2507223 2507224 VCV52_1525 VCV52_1524 ugpA ugpB TRUE 0.944 76.000 0.760 0.051 Y NA
 2507225 2507226 VCV52_1523 VCV52_1522     TRUE 0.962 0.000 0.846 NA   NA
 2507226 2507227 VCV52_1522 VCV52_1521   exbB2 TRUE 0.992 7.000 0.462 0.013 Y NA
 2507227 2507228 VCV52_1521 VCV52_1520 exbB2 exbD2 TRUE 0.988 -3.000 0.600 0.065 Y NA
 2507228 2507229 VCV52_1520 VCV52_1519 exbD2 tonB2 TRUE 0.880 0.000 0.312 1.000 N NA
 2507229 2507230 VCV52_1519 VCV52_1518 tonB2   TRUE 0.941 -3.000 0.625 1.000   NA
 2507230 2507231 VCV52_1518 VCV52_1517   ligA-2 FALSE 0.003 307.000 0.000 1.000   NA
 2507232 2507233 VCV52_1516 VCV52_1515     FALSE 0.001 204.000 0.054 NA   NA
 2507233 2507234 VCV52_1515 VCV52_1514     FALSE 0.007 243.000 0.000 NA   NA
 2507234 2507235 VCV52_1514 VCV52_1513     FALSE 0.005 158.000 0.033 NA   NA
 2507240 2507241 VCV52_1508 VCV52_1507     FALSE 0.140 163.000 0.167 NA   NA
 2507243 2507244 VCV52_1505 VCV52_1504     FALSE 0.002 410.000 0.000 NA   NA
 2507245 2507246 VCV52_1503 VCV52_1502 moeA-1 mobA TRUE 0.968 -3.000 0.073 0.003 Y NA
 2507246 2507247 VCV52_1502 VCV52_1501 mobA   FALSE 0.048 -46.000 0.035 1.000 N NA
 2507247 2507248 VCV52_1501 VCV52_1500     FALSE 0.465 9.000 0.115 1.000 N NA
 2507248 2507249 VCV52_1500 VCV52_1499     TRUE 0.979 7.000 0.524 NA Y NA
 2507250 2507251 VCV52_1498 VCV52_1497     TRUE 0.946 -10.000 0.312 1.000 Y NA
 2507251 2507252 VCV52_1497 VCV52_1496     FALSE 0.011 212.000 0.000 1.000   NA
 2507254 2507255 VCV52_1494 VCV52_1493     TRUE 0.946 -10.000 0.901 NA   NA
 2507255 2507256 VCV52_1493 VCV52_1492     FALSE 0.080 199.000 0.195 NA   NA
 2507256 2507257 VCV52_1492 VCV52_1491     TRUE 0.923 26.000 0.347 0.042   NA
 2507257 2507258 VCV52_1491 VCV52_1490     FALSE 0.414 77.000 0.200 NA   NA
 2507258 2507259 VCV52_1490 VCV52_1489     TRUE 0.952 12.000 0.708 NA   NA
 2507259 2507260 VCV52_1489 VCV52_1488   fdhB TRUE 0.995 12.000 0.750 0.002 Y NA
 2507260 2507261 VCV52_1488 VCV52_1487 fdhB fdnI TRUE 0.988 1.000 0.217 0.002 Y NA
 2507261 2507262 VCV52_1487 VCV52_1486 fdnI   TRUE 0.694 -13.000 0.157 NA   NA
 2507262 2507263 VCV52_1486 VCV52_1485   cobB FALSE 0.011 98.000 0.052 NA   NA
 2507264 2507265 VCV52_1484 VCV52_1483   aroH FALSE 0.086 12.000 0.038 NA   NA
 2507269 2507270 VCV52_1479 VCV52_1478     TRUE 0.798 31.000 0.420 NA   NA
 2507270 2507271 VCV52_1478 VCV52_1477     TRUE 0.966 10.000 0.840 NA   NA
 2507271 2507272 VCV52_1477 VCV52_1476     FALSE 0.027 34.000 0.038 NA   NA
 2507274 2507275 VCV52_A0153 VCV52_A0152   glpT FALSE 0.002 375.000 0.000 NA   NA
 2507275 2507276 VCV52_A0152 VCV52_A0151 glpT glpQ TRUE 0.852 106.000 0.396 0.001 N NA
 2507277 2507278 VCV52_A0150 VCV52_A0149   udp-2 FALSE 0.330 140.000 0.294 NA N NA
 2507278 2507279 VCV52_A0149 VCV52_A0148 udp-2 pnuC TRUE 0.799 -3.000 0.227 1.000 N NA
 2507279 2507280 VCV52_A0148 VCV52_A0147 pnuC rbsR FALSE 0.009 126.000 0.068 1.000 N NA
 2507280 2507281 VCV52_A0147 VCV52_A0146 rbsR rbsK TRUE 0.925 11.000 0.500 1.000 N NA
 2507281 2507282 VCV52_A0146 VCV52_A0145 rbsK rbsB TRUE 0.689 139.000 0.347 1.000 Y NA
 2507282 2507283 VCV52_A0145 VCV52_A0144 rbsB   TRUE 0.973 55.000 0.847 0.002 Y NA
 2507283 2507284 VCV52_A0144 VCV52_A0143   rbsA TRUE 0.991 15.000 0.504 0.002 Y NA
 2507284 2507285 VCV52_A0143 VCV52_A0142 rbsA rbsD TRUE 0.910 27.000 0.337 1.000 Y NA
 2507287 2507288 VCV52_A0140 VCV52_A0139   vgrG-3 TRUE 0.911 -3.000 0.375 NA   NA
 2507288 2507289 VCV52_A0139 VCV52_A0138 vgrG-3   FALSE 0.007 239.000 0.000 1.000   NA
 2507289 2507290 VCV52_A0138 VCV52_A0137     FALSE 0.605 48.000 0.281 NA   NA
 2507290 2507291 VCV52_A0137 VCV52_A0136     TRUE 0.939 16.000 0.750 NA   NA
 2507291 2507292 VCV52_A0136 VCV52_A0135     TRUE 0.960 10.000 0.711 NA   NA
 2507292 2507293 VCV52_A0135 VCV52_A0134     TRUE 0.666 -30.000 0.158 NA   NA
 2507293 2507294 VCV52_A0134 VCV52_A0133   clpB-2 TRUE 0.926 3.000 0.118 0.017 N NA
 2507294 2507295 VCV52_A0133 VCV52_A0132 clpB-2   TRUE 0.839 26.000 0.471 NA   NA
 2507295 2507296 VCV52_A0132 VCV52_A0131     TRUE 0.720 83.000 0.673 NA   NA
 2507296 2507297 VCV52_A0131 VCV52_A0130     TRUE 0.964 7.000 0.765 NA   NA
 2507297 2507298 VCV52_A0130 VCV52_A0129     TRUE 0.966 3.000 0.862 NA   NA
 2507298 2507299 VCV52_A0129 VCV52_A0128     TRUE 0.945 3.000 0.510 NA   NA
 2507299 2507300 VCV52_A0128 VCV52_A0127     TRUE 0.899 27.000 0.863 NA   NA
 2507300 2507301 VCV52_A0127 VCV52_A0126     TRUE 0.950 6.000 0.552 NA   NA
 2507301 2507302 VCV52_A0126 VCV52_A0125     TRUE 0.955 3.000 0.627 NA   NA
 2507302 2507303 VCV52_A0125 VCV52_A0124     TRUE 0.845 41.000 0.821 NA   NA
 2507303 2507304 VCV52_A0124 VCV52_A0123     FALSE 0.002 432.000 0.000 NA   NA
 2507307 2507308 VCV52_A0120 VCV52_A0119     FALSE 0.190 176.000 0.278 NA   NA
 2507308 2507309 VCV52_A0119 VCV52_A0118   pspE FALSE 0.598 0.000 0.130 NA N NA
 2507310 2507311 VCV52_A0117 VCV52_A0116   pncB FALSE 0.030 31.000 0.021 1.000   NA
 2507313 2507314 VCV52_A0114 VCV52_A0113     TRUE 0.814 43.000 0.700 NA   NA
 2507314 2507315 VCV52_A0113 VCV52_A0112     FALSE 0.005 269.000 0.000 NA   NA
 2507315 2507316 VCV52_A0112 VCV52_A0111     FALSE 0.009 228.000 0.000 NA   NA
 2507317 2507318 VCV52_A0110 VCV52_A0108     FALSE 0.031 30.000 0.057 NA   NA
 2507323 2507324 VCV52_A0104 VCV52_A0103     TRUE 0.659 74.000 0.471 NA   NA
 2507324 2507325 VCV52_A0103 VCV52_A0102     FALSE 0.117 101.000 0.100 NA   NA
 2507328 2507329 VCV52_A0099 VCV52_A0098     FALSE 0.008 268.000 0.130 1.000 N NA
 2507330 2507331 VCV52_A0097 VCV52_A0096     FALSE 0.020 192.000 0.098 1.000   NA
 2507332 2507333 VCV52_0289 VCV52_0288 accC prmA FALSE 0.026 209.000 0.152 1.000 N NA
 2507333 2507334 VCV52_0288 VCV52_0287 prmA   FALSE 0.376 113.000 0.042 1.000 Y NA
 2507334 2507335 VCV52_0287 VCV52_0286   fis FALSE 0.495 24.000 0.161 1.000 N NA
 2507335 2507336 VCV52_0286 VCV52_0285 fis gntR FALSE 0.592 138.000 0.027 0.052 Y NA
 2507337 2507338 VCV52_0284 VCV52_0283 edd gntV TRUE 0.858 -3.000 0.066 1.000 Y NA
 2507339 2507340 VCV52_0282 VCV52_0281   eda TRUE 0.936 13.000 0.192 1.000 Y NA
 2507340 2507341 VCV52_0281 VCV52_0280 eda   FALSE 0.001 222.000 0.000 1.000 N NA
 2507341 2507342 VCV52_0280 VCV52_0279     TRUE 0.837 21.000 0.333 NA   NA
 2507342 2507343 VCV52_0279 VCV52_0278     FALSE 0.599 50.000 0.286 NA   NA
 2507343 2507344 VCV52_0278 VCV52_0277     FALSE 0.574 60.000 0.286 NA   NA
 2507345 2507346 VCV52_0276 VCV52_0275 cadA   TRUE 0.815 44.000 0.250 1.000 Y NA
 2507346 2507347 VCV52_0275 VCV52_0274     FALSE 0.005 288.000 0.000 NA   NA
 2507347 2507348 VCV52_0274 VCV52_0273     FALSE 0.004 299.000 0.000 NA   NA
 2507348 2507349 VCV52_0273 VCV52_0272   zntR FALSE 0.106 266.000 0.065 0.079 Y NA
 2507350 2507351 VCV52_0271 VCV52_0270   purH FALSE 0.013 76.000 0.004 1.000   NA
 2507351 2507352 VCV52_0270 VCV52_0269 purH purD TRUE 0.772 59.000 0.238 1.000 Y NA
 2507353 2507354 VCV52_0268 VCV52_0267   hupA FALSE 0.452 1.000 0.087 NA   NA
 2507356 2507357 VCV52_0265 VCV52_0264   manA-1 TRUE 0.758 -34.000 0.214 1.000   NA
 2507357 2507358 VCV52_0264 VCV52_0263 manA-1   FALSE 0.002 363.000 0.000 1.000   NA
 2507359 2507360 VCV52_0262 VCV52_0261     FALSE 0.093 0.000 0.050 NA N NA
 2507360 2507361 VCV52_0261 VCV52_0260     FALSE 0.017 55.000 0.023 NA N NA
 2507362 2507363 VCV52_0259 VCV52_0258     FALSE 0.186 40.000 0.000 NA   NA
 2507363 2507364 VCV52_0258 VCV52_0257     FALSE 0.366 -19.000 0.000 NA   NA
 2507364 2507365 VCV52_0257 VCV52_0256   galE-1 TRUE 0.967 8.000 0.297 1.000 Y NA
 2507368 2507369 VCV52_0253 VCV52_0252     TRUE 0.917 -40.000 0.714 NA   NA
 2507369 2507370 VCV52_0252 VCV52_0250     FALSE 0.461 -3.000 0.000 NA   NA
 2507371 2507372 VCV52_0251 VCV52_0249     FALSE 0.078 130.000 0.000 NA   NA
 2507372 2507373 VCV52_0249 VCV52_0248     FALSE 0.416 -7.000 0.000 NA   NA
 2507373 2507374 VCV52_0248 VCV52_0247     FALSE 0.139 58.000 0.000 NA   NA
 2507374 2507375 VCV52_0247 VCV52_0246     FALSE 0.457 13.000 0.000 NA   NA
 2507375 2507376 VCV52_0246 VCV52_0245     FALSE 0.181 39.000 0.000 1.000   NA
 2507376 2507377 VCV52_0245 VCV52_0244     TRUE 0.666 -3.000 0.125 1.000   NA
 2507377 2507378 VCV52_0244 VCV52_0243     TRUE 0.917 -3.000 0.141 1.000 Y NA
 2507378 2507379 VCV52_0243 VCV52_0242     TRUE 0.943 0.000 0.086 0.002   NA
 2507379 2507380 VCV52_0242 VCV52_0241     TRUE 0.653 63.000 0.000 0.013   NA
 2507380 2507381 VCV52_0241 VCV52_0240     FALSE 0.142 56.000 0.000 NA   NA
 2507381 2507382 VCV52_0240 VCV52_0239     FALSE 0.332 21.000 0.000 NA   NA
 2507382 2507383 VCV52_0239 VCV52_0238     TRUE 0.786 -10.000 0.028 1.000 Y NA
 2507383 2507384 VCV52_0238 VCV52_0237     FALSE 0.616 48.000 0.000 1.000 Y NA
 2507384 2507385 VCV52_0237 VCV52_0236     TRUE 0.952 18.000 0.000 0.013 Y NA
 2507385 2507386 VCV52_0236 VCV52_0235     FALSE 0.001 863.000 0.000 NA   NA
 2507386 2507387 VCV52_0235 VCV52_0234     FALSE 0.524 3.000 0.000 NA   NA
 2507388 2507389 VCV52_0233 VCV52_0232 rfaD   TRUE 0.714 106.000 0.022 0.017 Y NA
 2507389 2507390 VCV52_0232 VCV52_0231     TRUE 0.872 8.000 0.041 1.000 Y NA
 2507392 2507393 VCV52_1831 VCV52_1832     TRUE 0.995 3.000 0.903 0.017 Y NA
 2507393 2507394 VCV52_1832 VCV52_1833     TRUE 0.912 106.000 0.571 0.064 Y NA
 2507394 2507395 VCV52_1833 VCV52_1834     FALSE 0.515 179.000 0.533 1.000 Y NA
 2507395 2507396 VCV52_1834 VCV52_1835     FALSE 0.010 221.000 0.000 NA   NA
 2507397 2507398 VCV52_1836 VCV52_1837   pflB FALSE 0.014 179.000 0.080 NA   NA
 2507398 2507399 VCV52_1837 VCV52_1838 pflB   FALSE 0.296 136.000 0.200 NA   NA
 2507401 2507402 VCV52_1840 VCV52_1841 pflA   FALSE 0.015 66.000 0.043 NA   NA
 2507402 2507403 VCV52_1841 VCV52_1842     FALSE 0.182 109.000 0.120 NA   NA
 2507403 2507404 VCV52_1842 VCV52_1843     FALSE 0.008 241.000 0.000 NA   NA
 2507404 2507405 VCV52_1843 VCV52_1844     FALSE 0.583 145.000 0.683 NA   NA
 2507405 2507406 VCV52_1844 VCV52_1845     TRUE 0.951 13.000 0.761 NA   NA
 2507407 2507408 VCV52_1846 VCV52_1847 kdsB   TRUE 0.887 0.000 0.265 NA   NA
 2507408 2507409 VCV52_1847 VCV52_1848   lpxK TRUE 0.818 -19.000 0.263 NA   NA
 2507409 2507410 VCV52_1848 VCV52_1849 lpxK msbA TRUE 0.798 0.000 0.205 1.000 N NA
 2507410 2507411 VCV52_1849 VCV52_1850 msbA   TRUE 0.685 31.000 0.075 0.069   NA
 2507413 2507414 VCV52_1852 VCV52_1853     TRUE 0.906 1.000 0.125 0.064 N NA
 2507414 2507415 VCV52_1853 VCV52_1854     TRUE 0.898 -7.000 0.175 0.064 N NA
 2507416 2507417 VCV52_1855 VCV52_1856   mfd FALSE 0.100 3.000 0.039 NA   NA
 2507417 2507418 VCV52_1856 VCV52_1857 mfd   FALSE 0.023 140.000 0.071 NA   NA
 2507418 2507419 VCV52_1857 VCV52_1858     FALSE 0.003 335.000 0.000 NA   NA
 2507419 2507420 VCV52_1858 VCV52_1859     FALSE 0.004 285.000 0.000 1.000   NA
 2507421 2507422 VCV52_1860 VCV52_1861 ndh   FALSE 0.000 343.000 0.057 NA   NA
 2507422 2507423 VCV52_1861 VCV52_1862     FALSE 0.081 180.000 0.151 NA   NA
 2507423 2507424 VCV52_1862 VCV52_1863     TRUE 0.759 28.000 0.310 NA   NA
 2507424 2507425 VCV52_1863 VCV52_1864     TRUE 0.728 53.000 0.516 NA   NA
 2507425 2507426 VCV52_1864 VCV52_1865     TRUE 0.923 0.000 0.372 NA   NA
 2507426 2507427 VCV52_1865 VCV52_1866     FALSE 0.078 13.000 0.022 1.000   NA
 2507428 2507429 VCV52_1867 VCV52_1868     FALSE 0.410 170.000 0.667 1.000   NA
 2507431 2507432 VCV52_1870 VCV52_1871 nhaB dsbB TRUE 0.693 80.000 0.723 1.000 N NA
 2507433 2507434 VCV52_1872 VCV52_1873   lrp FALSE 0.009 1198.000 0.345 1.000   NA
 2507436 2507437 VCV52_1875 VCV52_1876   cysB FALSE 0.048 155.000 0.094 NA   NA
 2507437 2507438 VCV52_1876 VCV52_1877 cysB   FALSE 0.012 86.000 0.038 NA   NA
 2507439 2507440 VCV52_1878 VCV52_1879   miaE FALSE 0.015 62.000 0.039 NA   NA
 2507441 2507442 VCV52_1880 VCV52_1881 pyrF   FALSE 0.141 73.000 0.125 1.000 N NA
 2507442 2507443 VCV52_1881 VCV52_1882     TRUE 0.942 12.000 0.576 NA   NA
 2507443 2507444 VCV52_1882 VCV52_1883   hipB FALSE 0.299 139.000 0.208 NA   NA
 2507444 2507445 VCV52_1883 VCV52_1884 hipB   FALSE 0.029 288.000 0.292 1.000 N NA
 2507446 2507447 VCV52_2133 VCV52_2132 prfA hemK TRUE 0.960 4.000 0.229 0.047   NA
 2507447 2507448 VCV52_2132 VCV52_2131 hemK   FALSE 0.625 0.000 0.109 NA   NA
 2507448 2507449 VCV52_2131 VCV52_2130     TRUE 0.779 16.000 0.195 NA   NA
 2507449 2507450 VCV52_2130 VCV52_2129   kdsA FALSE 0.288 20.000 0.089 1.000   NA
 2507450 2507451 VCV52_2129 VCV52_2128 kdsA ushA FALSE 0.000 412.000 0.000 1.000 N NA
 2507451 2507452 VCV52_2128 VCV52_2127 ushA   FALSE 0.008 133.000 0.049 1.000   NA
 2507455 2507456 VCV52_2124 VCV52_2123   wrbA TRUE 0.956 3.000 0.657 NA   NA
 2507456 2507457 VCV52_2123 VCV52_2122 wrbA arsC TRUE 0.956 -3.000 0.253 0.041   NA
 2507457 2507458 VCV52_2122 VCV52_2121 arsC   TRUE 0.767 23.000 0.259 1.000   NA
 2507459 2507460 VCV52_2120 VCV52_2119     TRUE 0.782 -7.000 0.190 NA   NA
 2507460 2507461 VCV52_2119 VCV52_2118     FALSE 0.002 191.000 0.029 NA   NA
 2507462 2507463 VCV52_2117 VCV52_2116 bcp   FALSE 0.141 15.000 0.102 1.000 N NA
 2507464 2507465 VCV52_2115 VCV52_2114 dapA nlpB TRUE 0.791 58.000 0.267 NA Y NA
 2507466 2507467 VCV52_2113 VCV52_2112     TRUE 0.842 -10.000 0.273 NA   NA
 2507467 2507468 VCV52_2112 VCV52_2111   dapE TRUE 0.940 3.000 0.163 0.028 N NA
 2507468 2507469 VCV52_2111 VCV52_2110 dapE   TRUE 0.668 31.000 0.292 1.000 N NA
 2507472 2507473 VCV52_2107 VCV52_2106     FALSE 0.513 66.000 0.241 NA   NA
 2507473 2507474 VCV52_2106 VCV52_2105   flaE FALSE 0.312 124.000 0.238 1.000 N NA
 2507474 2507475 VCV52_2105 VCV52_2104 flaE flaD FALSE 0.163 290.000 0.000 0.002 Y NA
 2507475 2507476 VCV52_2104 VCV52_2103 flaD flaB FALSE 0.263 236.000 0.000 0.002 Y NA
 2507476 2507477 VCV52_2103 VCV52_2102 flaB flaG FALSE 0.448 74.000 0.043 NA Y NA
 2507477 2507478 VCV52_2102 VCV52_2101 flaG fliD TRUE 0.751 22.000 0.053 NA Y NA
 2507478 2507479 VCV52_2101 VCV52_2100 fliD   TRUE 0.952 -7.000 1.000 NA   NA
 2507479 2507480 VCV52_2100 VCV52_2099   fliS TRUE 0.943 11.000 0.533 NA   NA
 2507480 2507481 VCV52_2099 VCV52_2098 fliS flrA FALSE 0.001 232.000 0.022 1.000 N NA
 2507481 2507482 VCV52_2098 VCV52_2097 flrA flrB TRUE 0.882 112.000 0.377 0.078 Y NA
 2507482 2507483 VCV52_2097 VCV52_2096 flrB flrC TRUE 0.989 -3.000 0.679 0.078 Y NA
 2507483 2507484 VCV52_2096 VCV52_2095 flrC fliE FALSE 0.632 58.000 0.446 1.000 N NA
 2507484 2507485 VCV52_2095 VCV52_2094 fliE fliF TRUE 0.992 16.000 0.910 0.006 Y NA
 2507485 2507486 VCV52_2094 VCV52_2093 fliF fliG TRUE 0.977 -7.000 0.189 0.006 Y NA
 2507486 2507487 VCV52_2093 VCV52_2092 fliG   TRUE 0.925 81.000 0.320 0.003 Y NA
 2507487 2507488 VCV52_2092 VCV52_2091   fliI TRUE 0.989 4.000 0.248 0.003 Y NA
 2507488 2507489 VCV52_2091 VCV52_2090 fliI   TRUE 0.969 15.000 0.127 0.009 Y NA
 2507491 2507492 VCV52_2088 VCV52_2087     TRUE 0.813 35.000 0.182 1.000 Y NA
 2507492 2507493 VCV52_2087 VCV52_2086   fliM TRUE 0.990 8.000 0.241 0.002 Y NA
 2507493 2507494 VCV52_2086 VCV52_2085 fliM fliN TRUE 0.967 65.000 0.741 0.002 Y NA
 2507494 2507495 VCV52_2085 VCV52_2084 fliN fliO TRUE 0.975 4.000 0.443 1.000 Y NA
 2507495 2507496 VCV52_2084 VCV52_2083 fliO fliP TRUE 0.863 -22.000 0.122 1.000 Y NA
 2507496 2507497 VCV52_2083 VCV52_2082 fliP fliQ TRUE 0.992 13.000 0.702 0.008 Y NA
 2507497 2507498 VCV52_2082 VCV52_2081 fliQ fliR TRUE 0.995 9.000 0.719 0.002 Y NA
 2507498 2507499 VCV52_2081 VCV52_2080 fliR flhB TRUE 0.960 10.000 0.240 1.000 Y NA
 2507501 2507502 VCV52_2078 VCV52_2077   aroC FALSE 0.001 230.000 0.081 1.000 N NA
 2507504 2507505 VCV52_2075 VCV52_2074     TRUE 0.755 39.000 0.425 NA   NA
 2507505 2507506 VCV52_2074 VCV52_2073     FALSE 0.019 208.000 0.106 NA   NA
 2507508 2507509 VCV52_2071 VCV52_2070 fabB   FALSE 0.003 204.000 0.069 1.000   NA
 2507509 2507510 VCV52_2070 VCV52_2069   pdxB TRUE 0.867 20.000 0.019 0.002   NA
 2507510 2507511 VCV52_2069 VCV52_2068 pdxB   FALSE 0.372 -19.000 0.097 1.000   NA
 2507517 2507518 VCV52_0383 VCV52_0384 rrfE   FALSE 0.294 24.000 0.000 NA   NA
 2507523 2507524 VCV52_0389 VCV52_0390   uvrA FALSE 0.016 56.000 0.013 1.000 N NA
 2507524 2507525 VCV52_0390 VCV52_0391 uvrA galU FALSE 0.005 156.000 0.013 1.000 N NA
 2507525 2507526 VCV52_0391 VCV52_0392 galU   TRUE 0.659 122.000 0.857 1.000 N NA
 2507527 2507528 VCV52_0393 VCV52_0394 ssb mshH FALSE 0.010 115.000 0.071 1.000 N NA
 2507528 2507529 VCV52_0394 VCV52_0395 mshH mshI FALSE 0.078 13.000 0.051 NA N NA
 2507529 2507530 VCV52_0395 VCV52_0396 mshI mshJ FALSE 0.328 -3.000 0.082 NA   NA
 2507530 2507531 VCV52_0396 VCV52_0397 mshJ mshK TRUE 0.886 -7.000 0.344 NA   NA
 2507531 2507532 VCV52_0397 VCV52_0398 mshK mshL TRUE 0.892 15.000 0.356 NA   NA
 2507532 2507533 VCV52_0398 VCV52_0399 mshL mshM TRUE 0.985 5.000 0.846 1.000 Y NA
 2507533 2507534 VCV52_0399 VCV52_0400 mshM mshN TRUE 0.857 -21.000 0.338 1.000   NA
 2507534 2507535 VCV52_0400 VCV52_0401 mshN mshE TRUE 0.868 -10.000 0.328 1.000   NA
 2507535 2507536 VCV52_0401 VCV52_0402 mshE mshG TRUE 0.984 9.000 0.740 1.000 Y NA
 2507536 2507537 VCV52_0402 VCV52_0403 mshG mshF FALSE 0.100 3.000 0.039 NA   NA
 2507537 2507538 VCV52_0403 VCV52_0404 mshF mshB FALSE 0.455 81.000 0.231 NA   NA
 2507538 2507539 VCV52_0404 VCV52_0405 mshB mshA TRUE 0.706 26.000 0.231 NA   NA
 2507539 2507540 VCV52_0405 VCV52_0406 mshA mshC FALSE 0.301 37.000 0.111 NA   NA
 2507540 2507541 VCV52_0406 VCV52_0407 mshC mshD TRUE 0.938 5.000 0.433 NA   NA
 2507541 2507542 VCV52_0407 VCV52_0408 mshD   TRUE 0.963 0.000 0.871 NA   NA
 2507542 2507543 VCV52_0408 VCV52_0409     FALSE 0.362 -34.000 0.097 NA   NA
 2507543 2507544 VCV52_0409 VCV52_0410     TRUE 0.689 -7.000 0.143 NA   NA
 2507544 2507545 VCV52_0410 VCV52_0411   mreB FALSE 0.004 168.000 0.009 NA   NA
 2507545 2507546 VCV52_0411 VCV52_0412 mreB mreC TRUE 0.736 57.000 0.689 1.000 N NA
 2507546 2507547 VCV52_0412 VCV52_0413 mreC mreD TRUE 0.990 -13.000 0.550 0.002 Y NA
 2507547 2507548 VCV52_0413 VCV52_0414 mreD maf TRUE 0.660 -57.000 0.206 NA N NA
 2507548 2507549 VCV52_0414 VCV52_0415 maf cafA TRUE 0.789 26.000 0.417 NA N NA
 2507549 2507550 VCV52_0415 VCV52_0416 cafA   TRUE 0.883 13.000 0.296 NA   NA
 2507550 2507551 VCV52_0416 VCV52_0417     TRUE 0.930 9.000 0.358 NA   NA
 2507551 2507552 VCV52_0417 VCV52_0418   tldD TRUE 0.885 0.000 0.259 NA   NA
 2507554 2507555 VCV52_0420 VCV52_0421     FALSE 0.181 147.000 0.151 NA   NA
 2507556 2507557 VCV52_0422 VCV52_0423     FALSE 0.115 151.000 0.122 NA   NA
 2507557 2507558 VCV52_0423 VCV52_0424     FALSE 0.245 122.000 0.154 NA   NA
 2507558 2507559 VCV52_0424 VCV52_0425     FALSE 0.012 171.000 0.073 NA   NA
 2507559 2507560 VCV52_0425 VCV52_0426   argR FALSE 0.004 306.000 0.000 NA   NA
 2507561 2507562 VCV52_0427 VCV52_0428 mdh   FALSE 0.000 474.000 0.000 1.000 N NA
 2507564 2507565 VCV52_1681 VCV52_1680   yciB FALSE 0.029 214.000 0.167 NA N NA
 2507565 2507566 VCV52_1680 VCV52_1679 yciB   FALSE 0.009 233.000 0.000 NA   NA
 2507566 2507567 VCV52_1679 VCV52_1678     FALSE 0.005 153.000 0.040 NA   NA
 2507567 2507568 VCV52_1678 VCV52_1677     FALSE 0.067 -7.000 0.026 NA   NA
 2507568 2507569 VCV52_1677 VCV52_1676     FALSE 0.011 104.000 0.015 1.000   NA
 2507569 2507570 VCV52_1676 VCV52_1675     FALSE 0.044 -133.000 0.044 NA   NA
 2507571 2507572 VCV52_1674 VCV52_1673   torE FALSE 0.000 644.000 0.000 NA N NA
 2507572 2507573 VCV52_1673 VCV52_1672 torE torC TRUE 0.779 47.000 0.207 NA Y NA
 2507573 2507574 VCV52_1672 VCV52_1671 torC torA TRUE 0.984 24.000 0.857 0.041 Y NA
 2507574 2507575 VCV52_1671 VCV52_1670 torA   TRUE 0.920 19.000 0.667 NA   NA
 2507575 2507576 VCV52_1670 VCV52_1669     FALSE 0.112 61.000 0.089 NA   NA
 2507577 2507578 VCV52_1668 VCV52_1667     FALSE 0.133 64.000 0.000 NA   NA
 2507579 2507580 VCV52_1666 VCV52_1665     FALSE 0.052 -30.000 0.028 NA   NA
 2507581 2507582 VCV52_1664 VCV52_1663   sapF FALSE 0.608 1.000 0.105 NA   NA
 2507582 2507583 VCV52_1663 VCV52_1662 sapF sapD TRUE 0.992 -3.000 0.684 0.016 Y NA
 2507583 2507584 VCV52_1662 VCV52_1661 sapD sapC TRUE 0.980 0.000 0.667 1.000 Y NA
 2507584 2507585 VCV52_1661 VCV52_1660 sapC sapB TRUE 0.968 -13.000 0.210 0.049 Y NA
 2507585 2507586 VCV52_1660 VCV52_1659 sapB sapA TRUE 0.939 0.000 0.195 0.049 N NA
 2507586 2507587 VCV52_1659 VCV52_1658 sapA pspF FALSE 0.500 114.000 0.402 1.000 N NA
 2507588 2507589 VCV52_1657 VCV52_1656 pspA pspB TRUE 0.945 14.000 0.739 NA   NA
 2507589 2507590 VCV52_1656 VCV52_1655 pspB pspC TRUE 0.950 -7.000 0.913 NA   NA
 2507590 2507591 VCV52_1655 VCV52_1654 pspC   FALSE 0.048 172.000 0.133 NA N NA
 2507591 2507592 VCV52_1654 VCV52_1653     TRUE 0.990 -28.000 0.950 0.008 Y NA
 2507592 2507593 VCV52_1653 VCV52_1652     FALSE 0.528 -22.000 0.150 1.000 N NA
 2507593 2507594 VCV52_1652 VCV52_1651   tag FALSE 0.012 87.000 0.006 1.000 N NA
 2507595 2507596 VCV52_1650 VCV52_1649 metC cls FALSE 0.065 81.000 0.110 1.000 N NA
 2507597 2507598 VCV52_1648 VCV52_1647     FALSE 0.059 108.000 0.083 1.000   NA
 2507599 2507600 VCV52_1646 VCV52_1645     TRUE 0.889 -7.000 0.359 1.000   NA
 2507600 2507601 VCV52_1645 VCV52_1644     TRUE 0.906 -34.000 0.602 1.000   NA
 2507601 2507602 VCV52_1644 VCV52_1643     TRUE 0.975 14.000 0.627 0.049   NA
 2507602 2507603 VCV52_1643 VCV52_1642   hslJ FALSE 0.013 208.000 0.000 NA   NA
 2507605 2507606 VCV52_1640 VCV52_1639     FALSE 0.005 159.000 0.024 NA   NA
 2507606 2507607 VCV52_1639 VCV52_1638     TRUE 0.935 -3.000 0.671 1.000 N NA
 2507607 2507608 VCV52_1638 VCV52_1637     TRUE 0.984 10.000 0.752 NA Y NA
 2507608 2507609 VCV52_1637 VCV52_1636   sdaC-2 FALSE 0.004 169.000 0.053 NA N NA
 2507611 2507612 VCV52_1634 VCV52_1633 mgtE-1   TRUE 0.903 -16.000 0.000 0.003   NA
 2507613 2507614 VCV52_1632 VCV52_1631 vieS vieA TRUE 0.991 5.000 0.462 0.021 Y NA
 2507614 2507615 VCV52_1631 VCV52_1630 vieA vieB TRUE 0.991 12.000 0.625 0.021 Y NA
 2507617 2507618 VCV52_2012 VCV52_2013 sodB   FALSE 0.013 82.000 0.024 NA   NA
 2507621 2507622 VCV52_2016 VCV52_2017 vacJ ccmI FALSE 0.469 53.000 0.239 NA N NA
 2507622 2507623 VCV52_2017 VCV52_2018 ccmI ccmH TRUE 0.983 3.000 0.727 NA Y NA
 2507623 2507624 VCV52_2018 VCV52_2019 ccmH dsbE TRUE 0.974 -3.000 0.578 NA Y NA
 2507624 2507625 VCV52_2019 VCV52_2020 dsbE ccmF TRUE 0.996 1.000 0.804 0.002 Y NA
 2507625 2507626 VCV52_2020 VCV52_2021 ccmF ccmE TRUE 0.985 -3.000 0.211 0.002 Y NA
 2507626 2507627 VCV52_2021 VCV52_2022 ccmE ccmD TRUE 0.878 -3.000 0.344 1.000 N NA
 2507627 2507628 VCV52_2022 VCV52_2023 ccmD ccmC TRUE 0.926 0.000 0.501 1.000 N NA
 2507628 2507629 VCV52_2023 VCV52_2024 ccmC ccmB TRUE 0.825 91.000 0.054 0.001 Y NA
 2507629 2507630 VCV52_2024 VCV52_2025 ccmB ccmA TRUE 0.971 -3.000 0.074 0.002 Y NA
 2507630 2507631 VCV52_2025 VCV52_2026 ccmA   FALSE 0.002 374.000 0.000 NA   NA
 2507631 2507632 VCV52_2026 VCV52_2027   cheW-1 FALSE 0.508 -24.000 0.114 NA   NA
 2507632 2507633 VCV52_2027 VCV52_2028 cheW-1   TRUE 0.988 9.000 0.886 0.021   NA
 2507633 2507634 VCV52_2028 VCV52_2029     TRUE 0.907 -7.000 0.454 1.000   NA
 2507634 2507635 VCV52_2029 VCV52_2030   cheB-2 TRUE 0.745 10.000 0.170 1.000 N NA
 2507635 2507636 VCV52_2030 VCV52_2031 cheB-2 cheA-2 TRUE 0.964 27.000 0.327 0.021 Y NA
 2507636 2507637 VCV52_2031 VCV52_2032 cheA-2 cheZ TRUE 0.970 10.000 0.341 1.000 Y NA
 2507637 2507638 VCV52_2032 VCV52_2033 cheZ cheY-3 TRUE 0.867 56.000 0.516 1.000 Y NA
 2507638 2507639 VCV52_2033 VCV52_2034 cheY-3 fliA TRUE 0.899 22.000 0.283 0.077 N NA
 2507639 2507640 VCV52_2034 VCV52_2035 fliA   TRUE 0.892 -7.000 0.482 1.000 N NA
 2507640 2507641 VCV52_2035 VCV52_2036     TRUE 0.920 -40.000 0.241 0.016 N NA
 2507641 2507642 VCV52_2036 VCV52_2037   flhA TRUE 0.810 35.000 0.178 1.000 Y NA
 2507642 2507643 VCV52_2037 VCV52_2038 flhA sixA FALSE 0.000 332.000 0.000 1.000 N NA
 2507644 2507645 VCV52_2039 VCV52_2041     TRUE 0.896 -13.000 0.000 0.006   NA
 2507647 2507648 VCV52_2042 VCV52_2043 argS   FALSE 0.012 91.000 0.012 1.000 N NA
 2507649 2507650 VCV52_2044 VCV52_2045   feoB TRUE 0.881 -3.000 0.288 NA   NA
 2507650 2507651 VCV52_2045 VCV52_2046 feoB feoA TRUE 0.980 -3.000 0.778 1.000 Y NA
 2507651 2507652 VCV52_2046 VCV52_2047 feoA   FALSE 9.644577125805e-05 772.000 0.000 1.000 N NA
 2507652 2507653 VCV52_2047 VCV52_2048   znuA FALSE 0.003 182.000 0.040 1.000 N NA
 2507654 2507655 VCV52_2049 VCV52_2050 znuC znuB TRUE 0.975 -7.000 0.755 1.000 Y NA
 2507656 2507657 VCV52_2051 VCV52_2052 sucD sucC TRUE 0.996 0.000 0.806 0.001 Y NA
 2507657 2507658 VCV52_2052 VCV52_2053 sucC sucB FALSE 0.018 452.000 0.136 1.000 Y NA
 2507658 2507659 VCV52_2053 VCV52_2054 sucB sucA TRUE 0.941 29.000 0.667 1.000 Y NA
 2507659 2507660 VCV52_2054 VCV52_2055 sucA sdhB FALSE 0.457 89.000 0.067 1.000 Y NA
 2507660 2507661 VCV52_2055 VCV52_2056 sdhB sdhA TRUE 0.991 15.000 0.604 0.003 Y NA
 2507661 2507662 VCV52_2056 VCV52_2057 sdhA sdhD TRUE 0.995 1.000 0.705 0.003 Y NA
 2507662 2507663 VCV52_2057 VCV52_2058 sdhD sdhC TRUE 0.991 -6.000 0.453 0.001 Y NA
 2507667 2507668 VCV52_2062 VCV52_2063 pgm seqA FALSE 0.185 109.000 0.151 NA N NA
 2507669 2507670 VCV52_2468 VCV52_2469   argF FALSE 0.006 150.000 0.041 1.000 N NA
 2507670 2507671 VCV52_2469 VCV52_2470 argF pyrB FALSE 0.165 187.000 0.004 0.003 N NA
 2507671 2507672 VCV52_2470 VCV52_2471 pyrB pyrI TRUE 0.987 12.000 0.197 0.001 Y NA
 2507675 2507676 VCV52_2474 VCV52_2475 plsC murA FALSE 0.045 22.000 0.033 1.000 N NA
 2507676 2507677 VCV52_2475 VCV52_2476 murA   TRUE 0.867 8.000 0.258 1.000 N NA
 2507677 2507678 VCV52_2476 VCV52_2477     TRUE 0.907 -7.000 0.453 NA   NA
 2507678 2507679 VCV52_2477 VCV52_2478     TRUE 0.889 -3.000 0.308 NA   NA
 2507679 2507680 VCV52_2478 VCV52_2479     TRUE 0.841 1.000 0.188 NA   NA
 2507680 2507681 VCV52_2479 VCV52_2480     TRUE 0.949 3.000 0.562 NA   NA
 2507681 2507682 VCV52_2480 VCV52_2481     TRUE 0.964 -10.000 0.530 NA Y NA
 2507683 2507684 VCV52_2482 VCV52_2483     FALSE 0.446 50.000 0.226 1.000 N NA
 2507684 2507685 VCV52_2483 VCV52_2484     TRUE 0.947 0.000 0.598 1.000   NA
 2507685 2507686 VCV52_2484 VCV52_2485     TRUE 0.942 -3.000 0.617 NA   NA
 2507686 2507687 VCV52_2485 VCV52_2486     TRUE 0.870 -64.000 0.459 NA   NA
 2507687 2507688 VCV52_2486 VCV52_2487     TRUE 0.947 3.000 0.543 NA   NA
 2507688 2507689 VCV52_2487 VCV52_2488   rpoN FALSE 0.386 56.000 0.163 1.000   NA
 2507689 2507690 VCV52_2488 VCV52_2489 rpoN   TRUE 0.888 25.000 0.820 NA N NA
 2507690 2507691 VCV52_2489 VCV52_2490   ptsN TRUE 0.952 3.000 0.728 NA N NA
 2507691 2507692 VCV52_2490 VCV52_2491 ptsN   TRUE 0.802 13.000 0.186 NA   NA
 2507692 2507693 VCV52_2491 VCV52_2492   ptsO TRUE 0.844 9.000 0.182 NA   NA
 2507693 2507694 VCV52_2492 VCV52_2493 ptsO mgtE-2 FALSE 0.068 161.000 0.140 1.000 N NA
 2507697 2507698 VCV52_2496 VCV52_2497     TRUE 0.974 12.000 0.522 0.017 N NA
 2507698 2507699 VCV52_2497 VCV52_2498   tbpA TRUE 0.979 10.000 0.697 0.062 N NA
 2507699 2507700 VCV52_2498 VCV52_2499 tbpA ubiX FALSE 0.051 262.000 0.000 1.000 Y NA
 2507700 2507701 VCV52_2499 VCV52_2500 ubiX mpl TRUE 0.849 7.000 0.235 1.000 N NA
 2507702 2507703 VCV52_2501 VCV52_2502 fbp ppa FALSE 0.003 170.000 0.043 1.000 N NA
 2507704 2507705 VCV52_2503 VCV52_2504     TRUE 0.803 11.000 0.167 NA   NA
 2507705 2507706 VCV52_2504 VCV52_2505     TRUE 0.817 36.000 0.575 NA   NA
 2507707 2507708 VCV52_2506 VCV52_2507 msrA   FALSE 0.013 82.000 0.019 NA   NA
 2507708 2507709 VCV52_2507 VCV52_2508     FALSE 0.010 218.000 0.000 NA   NA
 2507709 2507710 VCV52_2508 VCV52_2509     FALSE 0.467 49.000 0.188 NA   NA
 2507710 2507711 VCV52_2509 VCV52_2510     FALSE 0.573 82.000 0.336 NA   NA
 2507711 2507712 VCV52_2510 VCV52_2511     TRUE 0.969 -9.000 0.605 NA Y NA
 2507712 2507713 VCV52_2511 VCV52_2512     FALSE 0.542 53.000 0.238 NA   NA
 2507713 2507714 VCV52_2512 VCV52_2513     FALSE 0.004 311.000 0.000 NA   NA
 2507715 2507716 VCV52_2514 VCV52_2515 cysC cysN TRUE 0.968 11.000 0.340 1.000 Y NA
 2507716 2507717 VCV52_2515 VCV52_2516 cysN cysD TRUE 0.977 18.000 0.574 0.001 N NA
 2507717 2507718 VCV52_2516 VCV52_2517 cysD cysG TRUE 0.787 103.000 0.417 1.000 Y NA
 2507719 2507720 VCV52_2518 VCV52_2519 cpdB   FALSE 0.027 119.000 0.104 1.000 N NA
 2507722 2507723 VCV52_2521 VCV52_2522     TRUE 0.751 3.000 0.132 NA   NA
 2507726 2507727 VCV52_2347 VCV52_2346 secA mutT FALSE 0.055 150.000 0.000 NA   NA
 2507727 2507728 VCV52_2346 VCV52_2345 mutT dapB FALSE 0.091 115.000 0.000 NA   NA
 2507730 2507731 VCV52_2343 VCV52_2342 carA carB TRUE 0.988 17.000 0.345 0.001 Y NA
 2507732 2507733 VCV52_2341 VCV52_2340     FALSE 0.002 424.000 0.000 NA   NA
 2507733 2507734 VCV52_2340 VCV52_2339     FALSE 0.004 304.000 0.000 NA   NA
 2507736 2507737 VCV52_2337 VCV52_2336     TRUE 0.782 -16.000 0.213 NA   NA
 2507737 2507738 VCV52_2336 VCV52_2335     TRUE 0.672 1.000 0.148 1.000 N NA
 2507738 2507739 VCV52_2335 VCV52_2334   pfs FALSE 0.413 13.000 0.117 1.000 N NA
 2507739 2507740 VCV52_2334 VCV52_2333 pfs   FALSE 0.012 88.000 0.038 NA   NA
 2507740 2507741 VCV52_2333 VCV52_2332   gltD-2 FALSE 0.264 187.000 0.545 NA   NA
 2507741 2507742 VCV52_2332 VCV52_2331 gltD-2 gltB-2 TRUE 0.975 16.000 0.118 0.001 Y NA
 2507742 2507743 VCV52_2331 VCV52_2330 gltB-2 gltD-1 FALSE 0.057 528.000 0.000 0.001 Y NA
 2507743 2507744 VCV52_2330 VCV52_2329 gltD-1 gltB-1 TRUE 0.976 1.000 0.014 0.001 Y NA
 2507745 2507746 VCV52_2328 VCV52_2327     FALSE 0.045 22.000 0.022 NA   NA
 2507746 2507747 VCV52_2327 VCV52_2326     FALSE 0.015 68.000 0.027 1.000   NA
 2507747 2507748 VCV52_2326 VCV52_2325   fexB TRUE 0.751 107.000 0.065 0.013 Y NA
 2507750 2507751 VCV52_2323 VCV52_2321     FALSE 0.651 27.000 0.200 NA   NA
 2507752 2507753 VCV52_2322 VCV52_2320     FALSE 0.002 401.000 0.000 NA   NA
 2507754 2507755 VCV52_2319 VCV52_2318 thrA thrB TRUE 0.860 21.000 0.133 1.000 Y NA
 2507755 2507756 VCV52_2318 VCV52_2317 thrB thrC TRUE 0.946 -3.000 0.233 1.000 Y NA
 2507758 2507759 VCV52_2315 VCV52_2314 nfo ung FALSE 0.012 369.000 0.012 1.000 Y NA
 2507759 2507760 VCV52_2314 VCV52_2313 ung   TRUE 0.837 0.000 0.190 NA   NA
 2507762 2507763 VCV52_1361 VCV52_1362 hrpA   FALSE 0.007 140.000 0.036 1.000   NA
 2507763 2507764 VCV52_1362 VCV52_1363     FALSE 0.011 216.000 0.000 NA   NA
 2507764 2507765 VCV52_1363 VCV52_1364   lplA FALSE 0.009 125.000 0.028 NA N NA
 2507765 2507766 VCV52_1364 VCV52_1366 lplA   FALSE 0.008 236.000 0.000 NA   NA
 2507768 2507769 VCV52_1367 VCV52_1368   cry2 FALSE 0.005 156.000 0.045 1.000 N NA
 2507769 2507770 VCV52_1368 VCV52_1369 cry2 sugE FALSE 0.007 146.000 0.045 1.000 N NA
 2507771 2507772 VCV52_1370 VCV52_1371   cheY-1 TRUE 0.967 8.000 0.290 1.000 Y NA
 2507772 2507773 VCV52_1371 VCV52_1372 cheY-1   TRUE 0.915 -7.000 0.500 NA   NA
 2507773 2507774 VCV52_1372 VCV52_1373   cheA-1 TRUE 0.943 14.000 0.700 NA   NA
 2507774 2507775 VCV52_1373 VCV52_1374 cheA-1 cheY-2 TRUE 0.968 -3.000 0.450 1.000 Y NA
 2507775 2507776 VCV52_1374 VCV52_1375 cheY-2 cheR-1 TRUE 0.964 -3.000 0.370 1.000 Y NA
 2507776 2507777 VCV52_1375 VCV52_1376 cheR-1   TRUE 0.828 11.000 0.185 1.000   NA
 2507777 2507778 VCV52_1376 VCV52_1377   cheB-1 TRUE 0.700 -13.000 0.161 1.000   NA
 2507778 2507779 VCV52_1377 VCV52_1378 cheB-1   TRUE 0.974 21.000 0.316 0.021 Y NA
 2507779 2507780 VCV52_1378 VCV52_1379     TRUE 0.969 13.000 0.123 0.021 Y NA
 2507781 2507782 VCV52_1380 VCV52_1381     TRUE 0.910 79.000 0.333 0.021 Y NA
 2507782 2507783 VCV52_1381 VCV52_1382   rhlE-1 FALSE 0.003 182.000 0.068 1.000 N NA
 2507785 2507786 VCV52_1384 VCV52_1385   vceA FALSE 0.055 -19.000 0.049 1.000 N NA
 2507786 2507787 VCV52_1385 VCV52_1386 vceA vceB FALSE 0.102 10.000 0.049 1.000   NA
 2507788 2507789 VCV52_1387 VCV52_1388     FALSE 0.001 222.000 0.000 1.000 N NA
 2507790 2507791 VCV52_1389 VCV52_1390 hcp-1 vgrG-1 FALSE 0.080 128.000 0.000 NA   NA
 2507791 2507792 VCV52_1390 VCV52_1391 vgrG-1   TRUE 0.753 -21.000 0.200 NA   NA
 2507792 2507793 VCV52_1391 VCV52_1392     TRUE 0.897 3.000 0.267 NA   NA
 2507793 2507794 VCV52_1392 VCV52_1393     TRUE 0.888 -3.000 0.308 NA   NA
 2507794 2507795 VCV52_1393 VCV52_1394     FALSE 0.502 145.000 0.500 NA   NA
 2507795 2507796 VCV52_1394 VCV52_1395     FALSE 0.281 88.000 0.147 NA   NA
 2507798 2507799 VCV52_1397 VCV52_1398     TRUE 0.944 17.000 0.867 NA   NA
 2507800 2507801 VCV52_1399 VCV52_1400 potD-1 potD-2 TRUE 0.906 112.000 0.375 0.013 Y NA
 2507802 2507803 VCV52_2584 VCV52_2585   aroK FALSE 0.653 28.000 0.208 1.000   NA
 2507803 2507804 VCV52_2585 VCV52_2586 aroK pilQ FALSE 0.142 187.000 0.319 1.000 N NA
 2507804 2507805 VCV52_2586 VCV52_2587 pilQ   TRUE 0.983 5.000 0.668 NA Y NA
 2507805 2507806 VCV52_2587 VCV52_2588     TRUE 0.971 -10.000 0.680 NA Y NA
 2507806 2507807 VCV52_2588 VCV52_2589     TRUE 0.971 -16.000 0.770 NA Y NA
 2507807 2507808 VCV52_2589 VCV52_2590     TRUE 0.965 -16.000 0.616 NA Y NA
 2507811 2507812 VCV52_2593 VCV52_2594     TRUE 0.754 72.000 0.204 0.006 N NA
 2507812 2507813 VCV52_2594 VCV52_2595     FALSE 0.001 224.000 0.026 NA   NA
 2507814 2507815 VCV52_2596 VCV52_2597 argH argG FALSE 0.171 233.000 0.278 1.000 Y NA
 2507815 2507816 VCV52_2597 VCV52_2598 argG argB TRUE 0.798 76.000 0.029 0.003 Y NA
 2507816 2507817 VCV52_2598 VCV52_2599 argB argC TRUE 0.978 10.000 0.097 0.003 Y NA
 2507818 2507819 VCV52_2600 VCV52_2601 argE ppc FALSE 0.003 174.000 0.053 1.000 N NA
 2507819 2507820 VCV52_2601 VCV52_2602 ppc   FALSE 0.000 359.000 0.000 NA N NA
 2507820 2507821 VCV52_2602 VCV52_2603     TRUE 0.807 -51.000 0.286 NA   NA
 2507822 2507823 VCV52_2604 VCV52_2605 cysE gpsA FALSE 0.585 73.000 0.429 1.000 N NA
 2507823 2507824 VCV52_2605 VCV52_2606 gpsA secB FALSE 0.074 190.000 0.206 1.000 N NA
 2507824 2507825 VCV52_2606 VCV52_2607 secB   FALSE 0.078 167.000 0.158 1.000 N NA
 2507825 2507826 VCV52_2607 VCV52_2608   yjeA FALSE 0.008 130.000 0.019 1.000 N NA
 2507827 2507828 VCV52_2609 VCV52_2610 frdA frdB TRUE 0.992 0.000 0.470 0.003 Y NA
 2507828 2507829 VCV52_2610 VCV52_2611 frdB frdC TRUE 0.993 3.000 0.454 0.003 Y NA
 2507829 2507830 VCV52_2611 VCV52_2612 frdC frdD TRUE 0.991 -19.000 0.787 0.003 Y NA
 2507833 2507834 VCV52_2615 VCV52_2616   groEL-1 FALSE 0.002 196.000 0.046 NA   NA
 2507834 2507835 VCV52_2616 VCV52_2617 groEL-1 groES-1 TRUE 0.960 54.000 0.631 0.007 Y NA
 2507836 2507837 VCV52_2618 VCV52_2619     FALSE 0.009 139.000 0.064 NA   NA
 2507838 2507839 VCV52_2620 VCV52_2621     TRUE 0.808 20.000 0.271 1.000   NA
 2507840 2507841 VCV52_2622 VCV52_2623 tpiA   FALSE 0.010 118.000 0.016 1.000 N NA
 2507842 2507843 VCV52_2624 VCV52_2625   menA TRUE 0.658 75.000 0.158 NA Y NA
 2507843 2507844 VCV52_2625 VCV52_2626 menA hslU FALSE 0.011 104.000 0.051 1.000 N NA
 2507844 2507845 VCV52_2626 VCV52_2627 hslU hslV TRUE 0.892 66.000 0.752 1.000 Y NA
 2507845 2507846 VCV52_2627 VCV52_2628 hslV   FALSE 0.075 137.000 0.122 NA N NA
 2507846 2507847 VCV52_2628 VCV52_2629     FALSE 0.146 172.000 0.245 NA N NA
 2507847 2507848 VCV52_2629 VCV52_2630   priA FALSE 0.000 306.000 0.013 1.000 N NA
 2507849 2507850 VCV52_1762 VCV52_1763   orfA FALSE 0.445 -3.000 0.000 1.000   NA
 2507850 2507851 VCV52_1763 VCV52_1764 orfA   FALSE 0.537 7.000 0.000 NA   NA
 2507851 2507852 VCV52_1764 VCV52_1765     FALSE 0.001 537.000 0.000 NA   NA
 2507852 2507853 VCV52_1765 VCV52_1766     FALSE 0.152 49.000 0.000 NA   NA
 2507853 2507854 VCV52_1766 VCV52_1767     FALSE 0.144 55.000 0.000 NA   NA
 2507854 2507855 VCV52_1767 VCV52_1768     FALSE 0.363 19.000 0.000 NA   NA
 2507855 2507856 VCV52_1768 VCV52_1769     FALSE 0.384 -13.000 0.000 NA   NA
 2507856 2507857 VCV52_1769 VCV52_1770     FALSE 0.001 580.000 0.000 NA   NA
 2507857 2507858 VCV52_1770 VCV52_1771     FALSE 0.461 -3.000 0.000 NA   NA
 2507858 2507859 VCV52_1771 VCV52_1772     FALSE 0.524 3.000 0.000 NA   NA
 2507859 2507860 VCV52_1772 VCV52_1773     TRUE 0.889 -70.000 0.571 1.000   NA
 2507860 2507861 VCV52_1773 VCV52_1774     FALSE 0.537 7.000 0.000 NA   NA
 2507861 2507862 VCV52_1774 VCV52_1775     FALSE 0.521 2.000 0.000 NA   NA
 2507863 2507864 VCV52_1776 VCV52_1777     FALSE 0.009 227.000 0.000 NA   NA
 2507864 2507865 VCV52_1777 VCV52_1778     TRUE 0.724 51.000 0.500 NA   NA
 2507865 2507866 VCV52_1778 VCV52_1779     TRUE 0.709 107.000 0.750 NA   NA
 2507871 2507872 VCV52_1783 VCV52_1785     FALSE 0.009 124.000 0.052 NA   NA
 2507873 2507874 VCV52_1786 VCV52_1787 cry1   FALSE 0.079 -3.000 0.036 1.000 N NA
 2507875 2507876 VCV52_1788 VCV52_1789     FALSE 0.011 97.000 0.027 NA   NA
 2507877 2507878 VCV52_1790 VCV52_1791 aldA-2 frvA FALSE 0.000 336.000 0.000 1.000 N NA
 2507878 2507879 VCV52_1791 VCV52_1792 frvA frwBC TRUE 0.994 12.000 1.000 0.008 Y NA
 2507881 2507882 VCV52_1794 VCV52_1796 frwB   TRUE 0.994 9.000 0.679 0.008 Y NA
 2507884 2507885 VCV52_1797 VCV52_1798 fruA-1 manA-2 FALSE 0.501 116.000 0.333 1.000   NA
 2507886 2507887 VCV52_1799 VCV52_1800     FALSE 0.003 336.000 0.000 1.000   NA
 2507889 2507890 VCV52_1802 VCV52_1803 nadA   FALSE 0.003 174.000 0.013 1.000   NA
 2507890 2507891 VCV52_1803 VCV52_1804   pal TRUE 0.846 16.000 0.278 1.000   NA
 2507891 2507892 VCV52_1804 VCV52_1805 pal tolB TRUE 0.806 32.000 0.592 1.000 N NA
 2507892 2507893 VCV52_1805 VCV52_1806 tolB tolA FALSE 0.068 15.000 0.089 NA N NA
 2507893 2507894 VCV52_1806 VCV52_1807 tolA tolR TRUE 0.661 18.000 0.183 NA N NA
 2507894 2507895 VCV52_1807 VCV52_1808 tolR tolQ TRUE 0.990 3.000 0.556 0.061 Y NA
 2507895 2507896 VCV52_1808 VCV52_1809 tolQ   TRUE 0.920 -10.000 0.593 1.000   NA
 2507896 2507897 VCV52_1809 VCV52_1810   cydB-1 FALSE 0.001 539.000 0.000 1.000   NA
 2507897 2507898 VCV52_1810 VCV52_1811 cydB-1 cydA-1 TRUE 0.988 18.000 0.750 0.040 Y NA
 2507900 2507901 VCV52_1760 VCV52_1759     TRUE 0.951 -3.000 0.750 NA   NA
 2507903 2507904 VCV52_1757 VCV52_1756 nanH nagA-2 FALSE 0.022 345.000 0.000 1.000 Y NA
 2507904 2507905 VCV52_1756 VCV52_1755 nagA-2   TRUE 0.980 4.000 0.600 1.000 Y NA
 2507905 2507906 VCV52_1755 VCV52_1754     TRUE 0.894 -12.000 0.143 1.000 Y NA
 2507907 2507908 VCV52_1753 VCV52_1752 dctP-1   TRUE 0.917 51.000 0.909 NA Y NA
 2507908 2507909 VCV52_1752 VCV52_1751     TRUE 0.979 8.000 0.524 NA Y NA
 2507909 2507910 VCV52_1751 VCV52_1750     TRUE 0.675 38.000 0.348 1.000 N NA
 2507910 2507911 VCV52_1750 VCV52_1749     FALSE 0.107 129.000 0.130 1.000 N NA
 2507911 2507912 VCV52_1749 VCV52_1748     FALSE 0.184 182.000 0.300 NA   NA
 2507912 2507913 VCV52_1748 VCV52_1747     TRUE 0.939 15.000 0.700 NA   NA
 2507915 2507916 VCV52_1745 VCV52_1744     TRUE 0.879 -18.000 0.389 NA   NA
 2507916 2507917 VCV52_1744 VCV52_1743     FALSE 0.172 141.000 0.138 NA   NA
 2507917 2507918 VCV52_1743 VCV52_1742     TRUE 0.948 -43.000 0.138 0.047 Y NA
 2507918 2507919 VCV52_1742 VCV52_1741     TRUE 0.801 1.000 0.160 NA   NA
 2507919 2507920 VCV52_1741 VCV52_1740     TRUE 0.938 -7.000 0.700 NA   NA
 2507920 2507921 VCV52_1740 VCV52_1739     FALSE 0.033 28.000 0.048 NA   NA
 2507921 2507922 VCV52_1739 VCV52_1738     FALSE 0.019 45.000 0.027 NA   NA
 2507922 2507923 VCV52_1738 VCV52_1737     TRUE 0.891 -7.000 0.360 NA   NA
 2507923 2507924 VCV52_1737 VCV52_1736     TRUE 0.734 -3.000 0.147 NA   NA
 2507924 2507925 VCV52_1736 VCV52_1735     TRUE 0.858 -9.000 0.293 NA   NA
 2507926 2507927 VCV52_1734 VCV52_1733     TRUE 0.901 75.000 0.667 0.006   NA
 2507927 2507928 VCV52_1733 VCV52_1732     FALSE 0.003 313.000 0.000 NA   NA
 2507928 2507929 VCV52_1732 VCV52_1731     FALSE 0.012 212.000 0.000 NA   NA
 2507929 2507930 VCV52_1731 VCV52_1730     TRUE 0.861 0.000 0.273 NA N NA
 2507933 2507934 VCV52_A0202 VCV52_A0203     FALSE 0.149 87.000 0.105 NA   NA
 2507934 2507935 VCV52_A0203 VCV52_A0204     TRUE 0.984 0.000 0.902 0.075   NA
 2507935 2507936 VCV52_A0204 VCV52_A0206     FALSE 0.024 38.000 0.013 1.000   NA
 2507939 2507940 VCV52_A0208 VCV52_A0209     TRUE 0.728 66.000 0.600 1.000   NA
 2507941 2507942 VCV52_A0210 VCV52_A0211 guaC   FALSE 0.000 324.000 0.000 1.000 N NA
 2507942 2507943 VCV52_A0211 VCV52_A0212     FALSE 0.363 124.000 0.222 NA   NA
 2507943 2507944 VCV52_A0212 VCV52_A0213     TRUE 0.862 -7.000 0.292 NA   NA
 2507944 2507945 VCV52_A0213 VCV52_A0214     FALSE 0.545 -3.000 0.104 NA   NA
 2507946 2507947 VCV52_A0215 VCV52_A0216 tnpA rfbP FALSE 0.166 44.000 0.000 NA   NA
 2507947 2507948 VCV52_A0216 VCV52_A0217 rfbP rhlE-2 FALSE 0.003 348.000 0.000 NA   NA
 2507948 2507949 VCV52_A0217 VCV52_A0218 rhlE-2 dcuB FALSE 0.003 190.000 0.066 1.000   NA
 2507949 2507950 VCV52_A0218 VCV52_A0219 dcuB   FALSE 0.010 111.000 0.044 NA   NA
 2507950 2507951 VCV52_A0219 VCV52_A0220   nadE FALSE 0.105 9.000 0.013 NA   NA
 2507952 2507953 VCV52_A0221 VCV52_A0222     FALSE 0.001 240.000 0.005 1.000 N NA
 2507956 2507957 VCV52_A0225 VCV52_A0226   emrD-2 FALSE 0.012 395.000 0.000 0.065 N NA
 2507957 2507958 VCV52_A0226 VCV52_A0227 emrD-2   TRUE 0.666 1.000 0.114 NA   NA
 2507960 2507961 VCV52_A0228 VCV52_A0230     FALSE 0.283 121.000 0.214 1.000 N NA
 2507962 2507963 VCV52_A0231 VCV52_A0232 hlyA hylB FALSE 0.004 299.000 0.000 1.000   NA
 2507963 2507964 VCV52_A0232 VCV52_A0233 hylB hlyC FALSE 0.005 267.000 0.000 1.000   NA
 2507964 2507965 VCV52_A0233 VCV52_A0234 hlyC   TRUE 0.951 10.000 0.587 1.000   NA
 2507966 2507967 VCV52_A0235 VCV52_A0236 prtV   FALSE 0.398 85.000 0.200 NA   NA
 2507968 2507969 VCV52_A0237 VCV52_A0238     FALSE 0.111 83.000 0.000 NA   NA
 2507969 2507970 VCV52_A0238 VCV52_A0239   vctP FALSE 0.003 316.000 0.000 1.000   NA
 2507971 2507972 VCV52_0101 VCV52_0100   glpG TRUE 0.936 7.000 0.405 1.000   NA
 2507972 2507973 VCV52_0100 VCV52_0099 glpG   FALSE 0.002 375.000 0.000 1.000   NA
 2507975 2507976 VCV52_0097 VCV52_0096 ubiC ubiA TRUE 0.959 1.000 0.248 NA Y NA
 2507978 2507979 VCV52_0094 VCV52_0093 lexA   FALSE 0.033 28.000 0.083 NA N NA
 2507979 2507980 VCV52_0093 VCV52_0092   dinF FALSE 0.014 71.000 0.039 NA N NA
 2507981 2507982 VCV52_0091 VCV52_0090 yhjA   FALSE 0.000 312.000 0.000 1.000 N NA
 2507982 2507983 VCV52_0090 VCV52_0089     TRUE 0.771 89.000 0.333 1.000 Y NA
 2507983 2507984 VCV52_0089 VCV52_0088   tatA-1 TRUE 0.988 4.000 0.246 0.007 Y NA
 2507984 2507985 VCV52_0088 VCV52_0087 tatA-1   FALSE 0.016 60.000 0.044 1.000   NA
 2507985 2507986 VCV52_0087 VCV52_0086     TRUE 0.918 -3.000 0.432 1.000   NA
 2507986 2507987 VCV52_0086 VCV52_0085   ubiE TRUE 0.783 9.000 0.145 1.000   NA
 2507987 2507988 VCV52_0085 VCV52_0084 ubiE   FALSE 0.019 45.000 0.047 NA   NA
 2507990 2507991 VCV52_0083 VCV52_0081     FALSE 0.008 133.000 0.028 NA   NA
 2507991 2507992 VCV52_0081 VCV52_0080   ftn FALSE 0.473 76.000 0.235 NA   NA
 2507993 2507994 VCV52_0079 VCV52_0078 uspA madN FALSE 0.055 57.000 0.076 1.000   NA
 2507995 2507996 VCV52_0077 VCV52_0076     FALSE 0.010 118.000 0.051 NA   NA
 2507996 2507997 VCV52_0076 VCV52_0075     FALSE 0.051 -33.000 0.055 NA   NA
 2507999 2508000 VCV52_0073 VCV52_0072     TRUE 0.675 104.000 0.625 NA   NA
 2508001 2508002 VCV52_0071 VCV52_0070     FALSE 0.008 133.000 0.074 1.000 N NA
 2508003 2508004 VCV52_0069 VCV52_0068 thiH thiG TRUE 0.987 -3.000 0.277 0.003 Y NA
 2508004 2508005 VCV52_0068 VCV52_0067 thiG thiF FALSE 0.243 206.000 0.005 0.022 Y NA
 2508005 2508006 VCV52_0067 VCV52_0066 thiF thiE TRUE 0.931 -13.000 0.242 1.000 Y NA
 2508006 2508007 VCV52_0066 VCV52_0065 thiE thiC TRUE 0.974 4.000 0.063 0.003 Y NA
 2508007 2508008 VCV52_0065 VCV52_0064 thiC crcB FALSE 0.001 252.000 0.000 NA N NA
 2508008 2508009 VCV52_0064 VCV52_0063 crcB   FALSE 0.009 233.000 0.000 NA   NA
 2508009 2508010 VCV52_0063 VCV52_0062     FALSE 0.240 30.000 0.000 NA   NA
 2508010 2508011 VCV52_0062 VCV52_0061   rrfA FALSE 0.119 74.000 0.000 NA   NA
 2508011 2508012 VCV52_0061 VCV52_0060 rrfA rrlA FALSE 0.079 129.000 0.000 NA   NA
 2508014 2508015 VCV52_0058 VCV52_0057   rrsA FALSE 0.133 64.000 0.000 NA   NA
 2508016 2508017 VCV52_1885 VCV52_1886   ppiD FALSE 0.008 135.000 0.033 1.000 N NA
 2508017 2508018 VCV52_1886 VCV52_1887 ppiD hupB FALSE 0.005 153.000 0.051 1.000 N NA
 2508018 2508019 VCV52_1887 VCV52_1888 hupB lon FALSE 0.002 184.000 0.030 1.000 N NA
 2508019 2508020 VCV52_1888 VCV52_1889 lon clpX TRUE 0.792 123.000 0.201 0.099 Y NA
 2508020 2508021 VCV52_1889 VCV52_1890 clpX clpP TRUE 0.793 80.000 0.352 1.000 Y NA
 2508021 2508022 VCV52_1890 VCV52_1891 clpP tig TRUE 0.765 106.000 0.351 1.000 Y NA
 2508022 2508023 VCV52_1891 VCV52_1892 tig   FALSE 0.004 291.000 0.000 NA   NA
 2508024 2508025 VCV52_1893 VCV52_1894 dctB dctD-1 TRUE 0.986 3.000 0.344 0.099 Y NA
 2508026 2508027 VCV52_1895 VCV52_1896 dctM   TRUE 0.986 4.000 0.882 NA Y NA
 2508027 2508028 VCV52_1896 VCV52_1897   dctP-2 TRUE 0.892 32.000 0.328 NA Y NA
 2508028 2508029 VCV52_1897 VCV52_1898 dctP-2   FALSE 0.009 232.000 0.000 NA   NA
 2508029 2508030 VCV52_1898 VCV52_1899     FALSE 0.003 171.000 0.011 NA   NA
 2508031 2508032 VCV52_1900 VCV52_1901     FALSE 0.569 -36.000 0.128 1.000   NA
 2508032 2508033 VCV52_1901 VCV52_1902     FALSE 0.146 79.000 0.128 1.000 N NA
 2508033 2508034 VCV52_1902 VCV52_1903     TRUE 0.966 3.000 0.155 0.002   NA
 2508034 2508035 VCV52_1903 VCV52_1904     TRUE 0.888 8.000 0.238 1.000   NA
 2508035 2508036 VCV52_1904 VCV52_1905     FALSE 0.114 90.000 0.098 NA   NA
 2508036 2508037 VCV52_1905 VCV52_1906     FALSE 0.004 294.000 0.000 NA   NA
 2508038 2508039 VCV52_1907 VCV52_1908     FALSE 0.003 313.000 0.000 NA   NA
 2508039 2508040 VCV52_1908 VCV52_1909     FALSE 0.005 284.000 0.000 NA   NA
 2508040 2508041 VCV52_1909 VCV52_1910     FALSE 0.330 -48.000 0.000 NA   NA
 2508042 2508043 VCV52_1911 VCV52_1912 folD pvcB FALSE 0.000 283.000 0.000 1.000 N NA
 2508043 2508044 VCV52_1912 VCV52_1913 pvcB   TRUE 0.951 -15.000 0.414 0.039 N NA
 2508047 2508048 VCV52_1916 VCV52_1917 bisZ yecK TRUE 0.977 23.000 0.481 0.039 Y NA
 2508048 2508049 VCV52_1917 VCV52_1918 yecK chiA-1 FALSE 0.001 255.000 0.000 1.000 N NA
 2508049 2508050 VCV52_1918 VCV52_1919 chiA-1   FALSE 0.001 264.000 0.000 1.000 N NA
 2508050 2508051 VCV52_1919 VCV52_1920     FALSE 0.000 331.000 0.000 1.000 N NA
 2508051 2508052 VCV52_1920 VCV52_1921     FALSE 0.083 164.000 0.156 NA N NA
 2508052 2508053 VCV52_1921 VCV52_1922     TRUE 0.817 25.000 0.363 NA   NA
 2508055 2508056 VCV52_0012 VCV52_0013 dnaN recF TRUE 0.943 18.000 0.318 1.000 Y NA
 2508056 2508057 VCV52_0013 VCV52_0014 recF gyrB TRUE 0.974 21.000 0.249 0.004 Y NA
 2508057 2508058 VCV52_0014 VCV52_0015 gyrB   FALSE 0.002 356.000 0.000 1.000   NA
 2508058 2508059 VCV52_0015 VCV52_0016     TRUE 0.940 10.000 0.455 NA   NA
 2508059 2508060 VCV52_0016 VCV52_0017   ibpA FALSE 0.005 276.000 0.000 NA   NA
 2508061 2508062 VCV52_0018 VCV52_0019 avtA glyS FALSE 0.000 319.000 0.005 1.000 N NA
 2508062 2508063 VCV52_0019 VCV52_0020 glyS glyQ TRUE 0.993 15.000 0.651 0.001 Y NA
 2508064 2508065 VCV52_0021 VCV52_0022     FALSE 0.011 106.000 0.059 NA   NA
 2508068 2508069 VCV52_0025 VCV52_0026   ilvA FALSE 0.001 248.000 0.000 1.000 N NA
 2508069 2508070 VCV52_0026 VCV52_0027 ilvA ilvD TRUE 0.916 4.000 0.106 1.000 Y NA
 2508070 2508071 VCV52_0027 VCV52_0028 ilvD ilvE TRUE 0.893 10.000 0.075 1.000 Y NA
 2508071 2508072 VCV52_0028 VCV52_0029 ilvE ilvM TRUE 0.790 -9.000 0.205 1.000   NA
 2508072 2508073 VCV52_0029 VCV52_0030 ilvM ilvG TRUE 0.990 12.000 0.943 0.002   NA
 2508074 2508075 VCV52_0031 VCV52_0032     FALSE 0.012 90.000 0.014 1.000 N NA
 2508076 2508077 VCV52_0033 VCV52_0034 tpcG   FALSE 0.147 31.000 0.082 NA   NA
 2508077 2508078 VCV52_0034 VCV52_0035     TRUE 0.692 12.000 0.125 NA   NA
 2508078 2508079 VCV52_0035 VCV52_0036     FALSE 0.000 354.000 0.036 NA   NA
 2508079 2508080 VCV52_0036 VCV52_0037     FALSE 0.369 97.000 0.196 NA   NA
 2508081 2508082 VCV52_0038 VCV52_0039     FALSE 0.142 78.000 0.102 NA   NA
 2508083 2508084 VCV52_0040 VCV52_0041   trkH-1 TRUE 0.862 12.000 0.234 NA   NA
 2508084 2508085 VCV52_0041 VCV52_0042 trkH-1 trkA TRUE 0.978 12.000 0.126 0.004 Y NA
 2508085 2508086 VCV52_0042 VCV52_0043 trkA sun FALSE 0.133 62.000 0.122 1.000 N NA
 2508086 2508087 VCV52_0043 VCV52_0044 sun fmt TRUE 0.884 32.000 0.305 1.000 Y NA
 2508087 2508088 VCV52_0044 VCV52_0045 fmt def-1 TRUE 0.940 18.000 0.058 0.019 Y NA
 2508089 2508090 VCV52_0046 VCV52_0047     FALSE 0.093 0.000 0.043 1.000   NA
 2508090 2508091 VCV52_0047 VCV52_0048   smg TRUE 0.723 3.000 0.124 NA   NA
 2508091 2508092 VCV52_0048 VCV52_0049 smg   TRUE 0.919 10.000 0.331 NA   NA
 2508093 2508094 VCV52_0050 VCV52_0051 purK purE TRUE 0.986 4.000 0.136 0.001 Y NA
 2508095 2508096 VCV52_0052 VCV52_0053   hemF FALSE 0.054 19.000 0.066 NA N NA
 2508096 2508097 VCV52_0053 VCV52_0054 hemF   FALSE 0.015 62.000 0.093 1.000 N NA
 2508097 2508098 VCV52_0054 VCV52_0056     FALSE 0.289 -3.000 0.078 NA   NA
 2508103 2508104 VCV52_1685 VCV52_1686     FALSE 0.613 114.000 0.516 NA   NA
 2508110 2508111 VCV52_1692 VCV52_1693   mukB FALSE 0.137 60.000 0.000 NA   NA
 2508111 2508112 VCV52_1693 VCV52_1694 mukB mukE TRUE 0.990 -3.000 1.000 0.001   NA
 2508112 2508113 VCV52_1694 VCV52_1695 mukE mukF TRUE 0.921 8.000 0.107 NA Y NA
 2508113 2508114 VCV52_1695 VCV52_1696 mukF smtA TRUE 0.879 12.000 0.325 NA N NA
 2508117 2508118 VCV52_1699 VCV52_1700 torD   FALSE 0.002 407.000 0.000 1.000   NA
 2508118 2508119 VCV52_1700 VCV52_1701     FALSE 0.021 359.000 0.000 NA Y NA
 2508119 2508120 VCV52_1701 VCV52_1702     FALSE 0.013 355.000 0.190 NA   NA
 2508120 2508121 VCV52_1702 VCV52_1703     TRUE 0.688 34.000 0.270 NA   NA
 2508122 2508123 VCV52_1704 VCV52_1705   glgA FALSE 0.002 188.000 0.064 1.000   NA
 2508123 2508124 VCV52_1705 VCV52_1706 glgA glgC-1 TRUE 0.881 2.000 0.063 1.000 Y NA
 2508129 2508130 VCV52_1711 VCV52_1712   aat FALSE 0.016 60.000 0.006 NA   NA
 2508130 2508131 VCV52_1712 VCV52_1713 aat   TRUE 0.965 4.000 0.285 1.000 Y NA
 2508131 2508132 VCV52_1713 VCV52_1714   infA FALSE 0.012 84.000 0.078 1.000 N NA
 2508132 2508133 VCV52_1714 VCV52_1715 infA   FALSE 0.025 36.000 0.002 NA   NA
 2508134 2508135 VCV52_1716 VCV52_1717     FALSE 0.001 505.000 0.085 NA   NA
 2508135 2508136 VCV52_1717 VCV52_1718     FALSE 0.386 56.000 0.164 1.000   NA
 2508141 2508142 VCV52_A0054 VCV52_A0053     FALSE 0.322 98.000 0.174 NA   NA
 2508143 2508144 VCV52_A0052 VCV52_A0051     TRUE 0.913 1.000 0.324 1.000   NA
 2508144 2508145 VCV52_A0051 VCV52_A0050   chiA-2 FALSE 0.000 377.000 0.000 1.000 N NA
 2508148 2508149 VCV52_A0047 VCV52_A0046     FALSE 0.013 116.000 0.066 1.000   NA
 2508150 2508151 VCV52_A0045 VCV52_A0044     FALSE 0.011 103.000 0.024 NA   NA
 2508151 2508152 VCV52_A0044 VCV52_A0043     TRUE 0.924 1.000 0.357 NA   NA
 2508152 2508153 VCV52_A0043 VCV52_A0042     TRUE 0.924 -3.000 0.467 NA   NA
 2508153 2508154 VCV52_A0042 VCV52_A0041   vgrG-2 FALSE 0.503 0.000 0.000 NA   NA
 2508154 2508155 VCV52_A0041 VCV52_A0040 vgrG-2 hcp-2 FALSE 0.080 128.000 0.000 NA   NA
 2508155 2508156 VCV52_A0040 VCV52_A0039 hcp-2 glgB FALSE 0.002 395.000 0.000 NA   NA
 2508156 2508157 VCV52_A0039 VCV52_A0038 glgB malQ FALSE 0.504 206.000 0.235 0.005 Y NA
 2508157 2508158 VCV52_A0038 VCV52_A0037 malQ malP TRUE 0.904 86.000 0.314 0.016 Y NA
 2508162 2508163 VCV52_A0033 VCV52_A0032 garR   FALSE 0.020 43.000 0.037 1.000   NA
 2508163 2508164 VCV52_A0032 VCV52_A0031     FALSE 0.362 88.000 0.184 NA   NA
 2508164 2508165 VCV52_A0031 VCV52_A0030     FALSE 0.509 94.000 0.304 NA   NA
 2508168 2508169 VCV52_0170 VCV52_0171     FALSE 0.122 71.000 0.000 NA   NA
 2508169 2508170 VCV52_0171 VCV52_0172     FALSE 0.134 62.000 0.000 NA   NA
 2508172 2508173 VCV52_0174 VCV52_0175     TRUE 0.870 20.000 0.408 1.000   NA
 2508173 2508174 VCV52_0175 VCV52_0176     TRUE 0.939 104.000 0.848 0.046 Y NA
 2508174 2508175 VCV52_0176 VCV52_0177     TRUE 0.994 3.000 1.000 0.046 Y NA
 2508175 2508176 VCV52_0177 VCV52_0178     FALSE 0.168 175.000 0.239 NA   NA
 2508177 2508178 VCV52_0179 VCV52_0180 gor   FALSE 0.110 106.000 0.100 1.000   NA
 2508179 2508180 VCV52_0181 VCV52_0182 prlC uvrD FALSE 0.008 138.000 0.036 1.000 N NA
 2508181 2508182 VCV52_0183 VCV52_0184     FALSE 0.287 75.000 0.182 1.000 N NA
 2508182 2508183 VCV52_0184 VCV52_0185   ggt FALSE 0.006 148.000 0.065 1.000 N NA
 2508183 2508184 VCV52_0185 VCV52_0186 ggt rarD FALSE 0.004 162.000 0.020 NA   NA
 2508185 2508186 VCV52_0187 VCV52_0188   recQ FALSE 0.013 82.000 0.011 NA   NA
 2508186 2508187 VCV52_0188 VCV52_0189 recQ   FALSE 0.067 -7.000 0.054 NA   NA
 2508187 2508188 VCV52_0189 VCV52_0190     FALSE 0.105 156.000 0.125 NA   NA
 2508190 2508191 VCV52_0192 VCV52_0193     TRUE 0.830 59.000 0.360 1.000 Y NA
 2508191 2508192 VCV52_0193 VCV52_0194     TRUE 0.970 -9.000 0.650 1.000 Y NA
 2508192 2508193 VCV52_0194 VCV52_0195     TRUE 0.978 -3.000 0.706 1.000 Y NA
 2508195 2508196 VCV52_0197 VCV52_0198     TRUE 0.902 21.000 0.609 1.000   NA
 2508197 2508198 VCV52_0199 VCV52_0200     FALSE 0.014 73.000 0.008 NA   NA
 2508199 2508200 VCV52_0201 VCV52_0202 rph pyrE FALSE 0.001 365.000 0.108 1.000 N NA
 2508201 2508202 VCV52_0203 VCV52_0204 msbB htrB TRUE 0.978 11.000 0.000 0.002 Y NA
 2508202 2508203 VCV52_0204 VCV52_0205 htrB   FALSE 0.079 -3.000 0.000 1.000 N NA
 2508207 2508208 VCV52_0909 VCV52_0908   rodA FALSE 0.079 -3.000 0.014 1.000   NA
 2508208 2508209 VCV52_0908 VCV52_0907 rodA   FALSE 0.093 0.000 0.043 NA N NA
 2508209 2508210 VCV52_0907 VCV52_0906   dacA-1 FALSE 0.434 92.000 0.057 NA Y NA
 2508210 2508211 VCV52_0906 VCV52_0905 dacA-1   FALSE 0.006 148.000 0.014 NA   NA
 2508211 2508212 VCV52_0905 VCV52_0904   lipB FALSE 0.141 179.000 0.219 NA   NA
 2508212 2508213 VCV52_0904 VCV52_0903 lipB lipA TRUE 0.988 -7.000 0.319 0.001 Y NA
 2508213 2508214 VCV52_0903 VCV52_0902 lipA   FALSE 0.004 169.000 0.008 NA   NA
 2508217 2508218 VCV52_0899 VCV52_0898     TRUE 0.887 -21.000 0.455 NA   NA
 2508220 2508221 VCV52_0897 VCV52_0895     TRUE 0.944 25.000 0.581 1.000 Y NA
 2508221 2508222 VCV52_0895 VCV52_0894     TRUE 0.941 4.000 0.474 1.000   NA
 2508222 2508223 VCV52_0894 VCV52_0893     FALSE 0.629 71.000 0.395 1.000   NA
 2508224 2508225 VCV52_0892 VCV52_0891     FALSE 0.036 176.000 0.103 NA   NA
 2508228 2508229 VCV52_0888 VCV52_0887   cpsF FALSE 0.003 196.000 0.065 NA   NA
 2508229 2508230 VCV52_0887 VCV52_0886 cpsF   FALSE 0.063 -10.000 0.032 NA   NA
 2508230 2508231 VCV52_0886 VCV52_0885     FALSE 0.079 -3.000 0.022 NA   NA
 2508231 2508232 VCV52_0885 VCV52_0884     FALSE 0.092 -24.000 0.101 1.000 N NA
 2508232 2508233 VCV52_0884 VCV52_0883     TRUE 0.715 0.000 0.167 1.000 N NA
 2508233 2508234 VCV52_0883 VCV52_0882     TRUE 0.964 11.000 0.857 NA   NA
 2508234 2508235 VCV52_0882 VCV52_0881     TRUE 0.936 -3.000 0.571 NA   NA
 2508235 2508236 VCV52_0881 VCV52_0880     TRUE 0.939 -3.000 0.600 1.000   NA
 2508236 2508237 VCV52_0880 VCV52_0879     TRUE 0.911 -3.000 0.500 1.000 N NA
 2508237 2508238 VCV52_0879 VCV52_0878   epsD TRUE 0.872 -3.000 0.333 1.000 N NA
 2508238 2508239 VCV52_0878 VCV52_0877 epsD wecB TRUE 0.953 20.000 0.500 1.000 Y NA
 2508239 2508240 VCV52_0877 VCV52_0876 wecB   FALSE 0.000 313.000 0.000 1.000 N NA
 2508240 2508241 VCV52_0876 VCV52_0875     FALSE 0.000 427.000 0.000 NA N NA
 2508241 2508242 VCV52_0875 VCV52_0874     FALSE 0.093 0.000 0.078 NA N NA
 2508244 2508245 VCV52_A0262 VCV52_A0263     FALSE 0.400 127.000 0.262 1.000   NA
 2508246 2508247 VCV52_A0264 VCV52_A0265   amy1 FALSE 0.144 173.000 0.250 1.000 N NA
 2508248 2508249 VCV52_A0266 VCV52_A0267     FALSE 0.054 77.000 0.077 NA   NA
 2508250 2508251 VCV52_A0268 VCV52_A0269     FALSE 0.473 172.000 1.000 NA   NA
 2508251 2508252 VCV52_A0269 VCV52_A0270     FALSE 0.517 89.000 0.300 NA   NA
 2508252 2508253 VCV52_A0270 VCV52_A0271     TRUE 0.960 -3.000 1.000 NA   NA
 2508253 2508254 VCV52_A0271 VCV52_A0272     TRUE 0.980 -3.000 0.800 1.000 Y NA
 2508254 2508255 VCV52_A0272 VCV52_A0273     TRUE 0.812 24.000 0.333 NA   NA
 2508255 2508256 VCV52_A0273 VCV52_A0274     TRUE 0.869 -43.000 0.429 NA   NA
 2508256 2508257 VCV52_A0274 VCV52_A0275     FALSE 0.240 195.000 0.571 NA   NA
 2508257 2508258 VCV52_A0275 VCV52_A0276     FALSE 0.524 110.000 0.333 NA   NA
 2508258 2508259 VCV52_A0276 VCV52_A0277     FALSE 0.529 106.000 0.333 NA   NA
 2508259 2508260 VCV52_A0277 VCV52_A0278     TRUE 0.816 11.000 0.176 1.000   NA
 2508263 2508264 VCV52_A0281 VCV52_A0282 emrD-3   FALSE 0.000 283.000 0.000 1.000 N NA
 2508264 2508265 VCV52_A0282 VCV52_A0283     TRUE 0.913 16.000 0.625 1.000 N NA
 2508265 2508266 VCV52_A0283 VCV52_A0284   dacA-2 FALSE 0.364 165.000 0.600 1.000 N NA
 2508266 2508267 VCV52_A0284 VCV52_A0285 dacA-2   TRUE 0.951 -3.000 0.750 NA   NA
 2508267 2508268 VCV52_A0285 VCV52_A0286     FALSE 0.527 65.000 0.250 NA   NA
 2508270 2508271 VCV52_A0288 VCV52_A0289   cah FALSE 0.033 28.000 0.023 NA   NA
 2508272 2508273 VCV52_A0290 VCV52_A0291 tnpA gcvP FALSE 0.003 180.000 0.000 1.000 N NA
 2508275 2508276 VCV52_A0293 VCV52_A0294 gcvH glyA-2 FALSE 0.616 37.000 0.054 1.000 Y NA
 2508277 2508278 VCV52_A0295 VCV52_A0296   gcvT FALSE 0.001 244.000 0.006 1.000   NA
 2508278 2508279 VCV52_A0296 VCV52_A0297 gcvT   FALSE 0.001 467.000 0.000 1.000   NA
 2508279 2508280 VCV52_A0297 VCV52_A0298     FALSE 0.646 46.000 0.000 0.046   NA
 2508280 2508281 VCV52_A0298 VCV52_A0299     FALSE 0.005 276.000 0.000 NA   NA
 2508281 2508282 VCV52_A0299 VCV52_A0300     FALSE 0.001 521.000 0.000 NA   NA
 2508282 2508283 VCV52_A0300 VCV52_A0301     TRUE 0.948 0.000 0.600 NA   NA
 2508283 2508284 VCV52_A0301 VCV52_A0302     TRUE 0.952 2.000 0.600 NA   NA
 2508284 2508285 VCV52_A0302 VCV52_A0303     FALSE 0.005 269.000 0.000 NA   NA
 2508286 2508287 VCV52_0966 VCV52_0965 rnt   FALSE 0.062 101.000 0.084 1.000   NA
 2508288 2508289 VCV52_0964 VCV52_0963 purF   TRUE 0.684 33.000 0.262 1.000   NA
 2508289 2508290 VCV52_0963 VCV52_0962   dedD FALSE 0.232 63.000 0.116 NA   NA
 2508290 2508291 VCV52_0962 VCV52_0961 dedD folC TRUE 0.866 1.000 0.216 NA   NA
 2508291 2508292 VCV52_0961 VCV52_0960 folC accD FALSE 0.648 45.000 0.383 1.000 N NA
 2508292 2508293 VCV52_0960 VCV52_0959 accD truA FALSE 0.003 174.000 0.044 1.000 N NA
 2508293 2508294 VCV52_0959 VCV52_0958 truA   FALSE 0.009 122.000 0.011 1.000   NA
 2508296 2508297 VCV52_0956 VCV52_0955 glnS nagE FALSE 0.001 248.000 0.006 1.000 N NA
 2508298 2508299 VCV52_0954 VCV52_0953 nagA-1 nagC TRUE 0.979 3.000 0.571 1.000 Y NA
 2508299 2508300 VCV52_0953 VCV52_0952 nagC   FALSE 0.294 95.000 0.200 1.000 N NA
 2508300 2508301 VCV52_0952 VCV52_0951   asnB FALSE 0.002 196.000 0.027 1.000 N NA
 2508302 2508303 VCV52_0950 VCV52_0949     FALSE 0.004 162.000 0.036 NA   NA
 2508305 2508306 VCV52_0947 VCV52_0946 hemH adk FALSE 0.061 115.000 0.113 1.000 N NA
 2508306 2508307 VCV52_0946 VCV52_0945 adk htpG FALSE 0.010 335.000 0.035 0.096 N NA
 2508308 2508309 VCV52_0944 VCV52_0943 toxR toxS TRUE 0.909 10.000 0.294 NA   NA
 2508309 2508310 VCV52_0943 VCV52_0942 toxS   FALSE 0.022 41.000 0.027 NA   NA
 2508312 2508313 VCV52_0940 VCV52_0939 rcp   FALSE 0.103 43.000 0.083 1.000   NA
 2508313 2508314 VCV52_0939 VCV52_0938     FALSE 0.013 75.000 0.024 NA   NA
 2508314 2508315 VCV52_0938 VCV52_0937     FALSE 0.003 172.000 0.022 NA   NA
 2508315 2508316 VCV52_0937 VCV52_0936     FALSE 0.012 431.000 0.075 NA Y NA
 2508316 2508317 VCV52_0936 VCV52_0935     TRUE 0.925 -112.000 0.313 NA Y NA
 2508318 2508319 VCV52_0934 VCV52_0933     FALSE 0.159 61.000 0.100 NA   NA
 2508319 2508320 VCV52_0933 VCV52_0932     FALSE 0.265 170.000 0.333 NA   NA
 2508321 2508322 VCV52_0977 VCV52_0978 uvrB luxO FALSE 0.009 431.000 0.000 0.096 N NA
 2508322 2508323 VCV52_0978 VCV52_0980 luxO luxU TRUE 0.957 4.000 0.654 NA   NA
 2508325 2508326 VCV52_0981 VCV52_0982 moaA moaB TRUE 0.873 60.000 0.108 0.003 Y NA
 2508326 2508327 VCV52_0982 VCV52_0983 moaB moaC TRUE 0.981 8.000 0.109 0.003 Y NA
 2508327 2508328 VCV52_0983 VCV52_0984 moaC moaD TRUE 0.981 -3.000 0.175 0.003 Y NA
 2508328 2508329 VCV52_0984 VCV52_0985 moaD moaE TRUE 0.993 2.000 0.501 0.003 Y NA
 2508331 2508332 VCV52_0987 VCV52_0988     FALSE 0.496 113.000 0.125 0.052 N NA
 2508332 2508333 VCV52_0988 VCV52_0989   udp-1 FALSE 0.000 446.000 0.000 1.000 N NA
 2508334 2508335 VCV52_0990 VCV52_0991   metG FALSE 0.010 226.000 0.000 NA   NA
 2508336 2508337 VCV52_0992 VCV52_0993 mrp udk FALSE 0.222 150.000 0.073 0.096 N NA
 2508337 2508338 VCV52_0993 VCV52_0994 udk asmA FALSE 0.011 98.000 0.037 NA N NA
 2508341 2508342 VCV52_0997 VCV52_0998   fadL-1 TRUE 0.891 -3.000 0.000 0.046   NA
 2508342 2508343 VCV52_0998 VCV52_0999 fadL-1 fadL-2 FALSE 0.036 303.000 0.000 0.046   NA
 2508343 2508344 VCV52_0999 VCV52_1000 fadL-2   FALSE 0.006 260.000 0.000 NA   NA
 2508344 2508345 VCV52_1000 VCV52_1001     TRUE 0.934 -37.000 0.946 NA   NA
 2508346 2508347 VCV52_1002 VCV52_1003 hadHB yfcX TRUE 0.972 0.000 0.430 1.000 Y NA
 2508347 2508348 VCV52_1003 VCV52_1004 yfcX   FALSE 0.009 127.000 0.011 1.000 N NA
 2508350 2508351 VCV52_1006 VCV52_1007     FALSE 0.034 170.000 0.000 NA   NA
 2508351 2508352 VCV52_1007 VCV52_1008     FALSE 0.503 0.000 0.000 NA   NA
 2508352 2508353 VCV52_1008 VCV52_1009   apt FALSE 0.008 132.000 0.043 NA   NA
 2508353 2508354 VCV52_1009 VCV52_1010 apt   FALSE 0.054 19.000 0.088 1.000 N NA
 2508355 2508356 VCV52_A0162 VCV52_A0163     FALSE 0.158 44.000 0.000 1.000   NA
 2508356 2508357 VCV52_A0163 VCV52_A0164     FALSE 0.122 67.000 0.000 1.000   NA
 2508358 2508359 VCV52_A0165 VCV52_A0166     TRUE 0.979 0.000 0.614 1.000 Y NA
 2508359 2508360 VCV52_A0166 VCV52_A0167     TRUE 0.982 -40.000 0.644 0.063 Y NA
 2508360 2508361 VCV52_A0167 VCV52_A0168     TRUE 0.980 -3.000 0.810 1.000 Y NA
 2508361 2508362 VCV52_A0168 VCV52_A0169     TRUE 0.995 12.000 0.896 0.002 Y NA
 2508362 2508363 VCV52_A0169 VCV52_A0170     TRUE 0.982 0.000 0.123 0.002 Y NA
 2508363 2508364 VCV52_A0170 VCV52_A0171     FALSE 0.018 147.000 0.068 NA   NA
 2508364 2508365 VCV52_A0171 VCV52_A0172     FALSE 0.627 72.000 0.385 NA   NA
 2508365 2508366 VCV52_A0172 VCV52_A0173   mtr FALSE 0.116 196.000 0.312 1.000 N NA
 2508366 2508367 VCV52_A0173 VCV52_A0174 mtr tnaA TRUE 0.771 79.000 0.308 1.000 Y NA
 2508372 2508373 VCV52_A0179 VCV52_A0180   cspA FALSE 0.000 499.000 0.000 1.000 N NA
 2508373 2508374 VCV52_A0180 VCV52_A0181 cspA   FALSE 0.577 124.000 0.500 NA   NA
 2508375 2508376 VCV52_A0182 VCV52_A0183     FALSE 0.012 89.000 0.026 NA   NA
 2508376 2508377 VCV52_A0183 VCV52_A0184     TRUE 0.697 -6.000 0.143 NA   NA
 2508377 2508378 VCV52_A0184 VCV52_A0185     FALSE 0.387 2.000 0.082 NA   NA
 2508378 2508379 VCV52_A0185 VCV52_A0186     TRUE 0.879 -13.000 0.370 NA   NA
 2508379 2508380 VCV52_A0186 VCV52_A0187     TRUE 0.949 -3.000 0.738 NA   NA
 2508380 2508381 VCV52_A0187 VCV52_A0188     TRUE 0.944 4.000 0.500 NA   NA
 2508382 2508383 VCV52_A0189 VCV52_A0190     FALSE 0.578 57.000 0.286 1.000   NA
 2508384 2508385 VCV52_A0191 VCV52_A0192     FALSE 0.421 15.000 0.000 NA   NA
 2508388 2508389 VCV52_A0195 VCV52_A0197 pepT   FALSE 0.003 172.000 0.044 NA N NA
 2508393 2508394 VCV52_1123 VCV52_1124   trpA FALSE 0.000 316.000 0.018 1.000 N NA
 2508394 2508395 VCV52_1124 VCV52_1125 trpA trpB TRUE 0.996 0.000 0.947 0.001 Y NA
 2508395 2508396 VCV52_1125 VCV52_1126 trpB trpC/F TRUE 0.953 41.000 0.221 0.001 Y NA
 2508396 2508397 VCV52_1126 VCV52_1127 trpC/F trpD TRUE 0.967 6.000 0.293 1.000 Y NA
 2508397 2508398 VCV52_1127 VCV52_1128 trpD trpG TRUE 0.800 -42.000 0.083 1.000 Y NA
 2508398 2508399 VCV52_1128 VCV52_1129 trpG trpE TRUE 0.994 -3.000 0.703 0.001 Y NA
 2508399 2508400 VCV52_1129 VCV52_1130 trpE trpL FALSE 0.025 134.000 0.070 NA   NA
 2508401 2508402 VCV52_1131 VCV52_1132     TRUE 0.902 3.000 0.281 NA   NA
 2508402 2508403 VCV52_1132 VCV52_1133     FALSE 0.382 133.000 0.075 NA Y NA
 2508404 2508405 VCV52_1134 VCV52_1135 cydC cydD TRUE 0.991 -7.000 0.631 0.004 Y NA
 2508405 2508406 VCV52_1135 VCV52_1136 cydD trxB FALSE 0.366 120.000 0.049 1.000 Y NA
 2508407 2508408 VCV52_1137 VCV52_1138     TRUE 0.796 -25.000 0.242 NA   NA
 2508408 2508409 VCV52_1138 VCV52_1139     FALSE 0.001 258.000 0.000 1.000 N NA
 2508410 2508411 VCV52_1140 VCV52_1141 sanA   FALSE 0.053 -27.000 0.058 NA   NA
 2508411 2508412 VCV52_1141 VCV52_1142   sfcA TRUE 0.833 4.000 0.178 NA   NA
 2508414 2508415 VCV52_1144 VCV52_1145     FALSE 0.298 55.000 0.128 NA   NA
 2508415 2508416 VCV52_1145 VCV52_1146     FALSE 0.004 292.000 0.000 NA   NA
 2508416 2508417 VCV52_1146 VCV52_1147     FALSE 0.421 136.000 0.308 NA   NA
 2508417 2508418 VCV52_1147 VCV52_1148     FALSE 0.015 65.000 0.018 1.000   NA
 2508418 2508419 VCV52_1148 VCV52_1149     FALSE 0.011 100.000 0.044 NA   NA
 2508419 2508420 VCV52_1149 VCV52_1150     FALSE 0.384 125.000 0.239 NA   NA
 2508421 2508422 VCV52_1151 VCV52_1152     FALSE 0.230 50.000 0.139 NA N NA
 2508422 2508423 VCV52_1152 VCV52_1154   htpX FALSE 0.039 250.000 0.043 NA Y NA
 2508424 2508425 VCV52_0574 VCV52_0575     TRUE 0.785 97.000 0.130 0.058 Y NA
 2508425 2508426 VCV52_0575 VCV52_0576     TRUE 0.907 84.000 0.374 0.045 Y NA
 2508426 2508427 VCV52_0576 VCV52_0577     TRUE 0.959 0.000 0.303 0.045 N NA
 2508428 2508429 VCV52_0578 VCV52_0579     TRUE 0.862 123.000 0.266 0.015 Y NA
 2508429 2508430 VCV52_0579 VCV52_0580   chb-1 TRUE 0.926 119.000 0.654 0.015 Y NA
 2508430 2508431 VCV52_0580 VCV52_0581 chb-1   TRUE 0.959 -3.000 0.316 NA Y NA
 2508431 2508432 VCV52_0581 VCV52_0582     TRUE 0.893 -3.000 0.316 NA   NA
 2508432 2508433 VCV52_0582 VCV52_0583     TRUE 0.666 57.000 0.395 1.000   NA
 2508433 2508434 VCV52_0583 VCV52_0584     TRUE 0.978 43.000 0.739 0.001 Y NA
 2508434 2508435 VCV52_0584 VCV52_0585     TRUE 0.986 3.000 0.895 1.000 Y NA
 2508435 2508436 VCV52_0585 VCV52_0586     TRUE 0.994 3.000 0.818 0.045 Y NA
 2508436 2508437 VCV52_0586 VCV52_0587     TRUE 0.815 170.000 0.727 0.045 Y NA
 2508437 2508438 VCV52_0587 VCV52_0588     FALSE 8.90953473504126e-05 911.000 0.000 1.000 N NA
 2508438 2508439 VCV52_0588 VCV52_0589     FALSE 0.015 64.000 0.021 1.000 N NA
 2508439 2508440 VCV52_0589 VCV52_0590     FALSE 0.045 73.000 0.071 NA   NA
 2508443 2508444 VCV52_0593 VCV52_0594     FALSE 0.009 120.000 0.007 NA   NA
 2508444 2508445 VCV52_0594 VCV52_0595     FALSE 0.011 98.000 0.017 NA   NA
 2508445 2508446 VCV52_0595 VCV52_0596     TRUE 0.851 11.000 0.250 NA N NA
 2508448 2508449 VCV52_0145 VCV52_0144 ftsX ftsE TRUE 0.882 -10.000 0.121 NA Y NA
 2508449 2508450 VCV52_0144 VCV52_0143 ftsE ftsY TRUE 0.782 22.000 0.117 0.095 N NA
 2508451 2508452 VCV52_0142 VCV52_0141     FALSE 0.081 -3.000 0.063 NA   NA
 2508453 2508454 VCV52_0140 VCV52_0139     FALSE 0.432 117.000 0.267 NA   NA
 2508454 2508455 VCV52_0139 VCV52_0138     FALSE 0.346 -34.000 0.000 NA   NA
 2508455 2508456 VCV52_0138 VCV52_0137     FALSE 0.002 421.000 0.000 NA   NA
 2508457 2508458 VCV52_0136 VCV52_0135     FALSE 0.034 170.000 0.000 NA   NA
 2508459 2508460 VCV52_0134 VCV52_0133     FALSE 0.047 -52.000 0.062 NA N NA
 2508461 2508462 VCV52_0132 VCV52_0131 lypA   FALSE 0.114 115.000 0.103 1.000   NA
 2508462 2508463 VCV52_0131 VCV52_0130     FALSE 0.005 284.000 0.000 NA   NA
 2508463 2508464 VCV52_0130 VCV52_0129     TRUE 0.796 -3.000 0.182 NA   NA
 2508465 2508466 VCV52_0128 VCV52_0127     FALSE 0.090 110.000 0.000 1.000   NA
 2508466 2508467 VCV52_0127 VCV52_0126   xerC TRUE 0.927 3.000 0.367 1.000   NA
 2508467 2508468 VCV52_0126 VCV52_0125 xerC   TRUE 0.921 -31.000 0.714 NA   NA
 2508468 2508469 VCV52_0125 VCV52_0124   dapF TRUE 0.771 14.000 0.175 NA   NA
 2508469 2508470 VCV52_0124 VCV52_0123 dapF lysA TRUE 0.977 12.000 0.104 0.002 Y NA
 2508470 2508471 VCV52_0123 VCV52_0122 lysA lppL FALSE 0.087 33.000 0.071 NA   NA
 2508474 2508475 VCV52_0119 VCV52_0118   hemC FALSE 0.003 177.000 0.004 NA   NA
 2508475 2508476 VCV52_0118 VCV52_0117 hemC hemD TRUE 0.942 46.000 0.205 0.001 Y NA
 2508476 2508477 VCV52_0117 VCV52_0116 hemD   TRUE 0.964 -16.000 0.600 1.000 Y NA
 2508477 2508478 VCV52_0116 VCV52_0115   hemY TRUE 0.979 -3.000 0.765 1.000 Y NA
 2508479 2508480 VCV52_0114 VCV52_0113 hemN   FALSE 0.467 85.000 0.244 NA   NA
 2508480 2508481 VCV52_0113 VCV52_0112     TRUE 0.960 7.000 0.679 NA   NA
 2508481 2508482 VCV52_0112 VCV52_0111     TRUE 0.913 0.000 0.333 NA   NA
 2508482 2508483 VCV52_0111 VCV52_0110   cycA FALSE 0.000 415.000 0.069 NA   NA
 2508485 2508486 VCV52_0852 VCV52_0851 thiI pomB FALSE 0.001 208.000 0.029 1.000 N NA
 2508486 2508487 VCV52_0851 VCV52_0850 pomB pomA TRUE 0.975 12.000 0.566 1.000 Y NA
 2508488 2508489 VCV52_0849 VCV52_0848 xseB ispA FALSE 0.381 42.000 0.177 1.000 N NA
 2508489 2508490 VCV52_0848 VCV52_0847 ispA dxs TRUE 0.920 20.000 0.246 1.000 Y NA
 2508491 2508492 VCV52_0846 VCV52_0845     TRUE 0.943 1.000 0.518 1.000   NA
 2508493 2508494 VCV52_0844 VCV52_0842     FALSE 0.535 123.000 0.402 NA   NA
 2508496 2508497 VCV52_0841 VCV52_0840     FALSE 0.079 -3.000 0.027 NA   NA
 2508498 2508499 VCV52_0839 VCV52_0838     FALSE 0.002 183.000 0.014 NA   NA
 2508499 2508500 VCV52_0838 VCV52_0837     TRUE 0.907 -3.000 0.083 0.012   NA
 2508501 2508502 VCV52_0836 VCV52_0835   proS FALSE 0.001 226.000 0.048 NA   NA
 2508502 2508503 VCV52_0835 VCV52_0834 proS   FALSE 0.001 242.000 0.008 NA   NA
 2508503 2508504 VCV52_0834 VCV52_0833     FALSE 0.119 103.000 0.101 NA   NA
 2508504 2508505 VCV52_0833 VCV52_0832     TRUE 0.937 6.000 0.421 NA   NA
 2508506 2508507 VCV52_0831 VCV52_0830 tnpA purL FALSE 0.003 175.000 0.000 1.000 N NA
 2508507 2508508 VCV52_0830 VCV52_0829 purL   FALSE 0.079 -3.000 0.021 NA   NA
 2508509 2508510 VCV52_0828 VCV52_0827     FALSE 0.093 0.000 0.026 NA   NA
 2508510 2508511 VCV52_0827 VCV52_0826     FALSE 0.003 179.000 0.026 NA   NA
 2508512 2508513 VCV52_0825 VCV52_0824 yfhC   FALSE 0.014 69.000 0.025 NA N NA
 2508513 2508514 VCV52_0824 VCV52_0823     FALSE 0.000 398.000 0.000 NA N NA
 2508514 2508515 VCV52_0823 VCV52_0822     TRUE 0.894 -10.000 0.410 NA   NA
 2508515 2