MicrobesOnline Operon Predictions for Vibrio cholerae O395

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 6954851 6954852 VC0395_0001 VC0395_0002 glpT glpQ FALSE 0.344 154.000 0.396 1.000 N NA
 6954853 6954854 VC0395_0003 VC0395_0004   udp-2 FALSE 0.356 140.000 0.294 NA N NA
 6954854 6954855 VC0395_0004 VC0395_0005 udp-2 pnuC TRUE 0.926 -3.000 0.227 1.000 N NA
 6954855 6954856 VC0395_0005 VC0395_0006 pnuC rbsR FALSE 0.011 126.000 0.068 1.000 N NA
 6954856 6954857 VC0395_0006 VC0395_0007 rbsR rbsK TRUE 0.967 11.000 0.500 1.000 N NA
 6954857 6954858 VC0395_0007 VC0395_0008 rbsK rbsB TRUE 0.675 139.000 0.347 NA Y NA
 6954858 6954859 VC0395_0008 VC0395_0009 rbsB rbsC TRUE 0.912 55.000 0.847 NA Y NA
 6954859 6954860 VC0395_0009 VC0395_0010 rbsC rbsA TRUE 0.982 30.000 0.504 0.001 Y NA
 6954860 6954861 VC0395_0010 VC0395_0011 rbsA rbsD TRUE 0.911 27.000 0.337 1.000 Y NA
 6954863 6954864 VC0395_0013 VC0395_0014   vgrG-3 TRUE 0.972 -3.000 0.375 NA   NA
 6954864 6954865 VC0395_0014 VC0395_0015 vgrG-3   FALSE 0.017 253.000 0.000 1.000   NA
 6954865 6954866 VC0395_0015 VC0395_0016     TRUE 0.656 48.000 0.281 NA   NA
 6954866 6954867 VC0395_0016 VC0395_0017     TRUE 0.819 -10.000 0.000 NA   NA
 6954867 6954868 VC0395_0017 VC0395_0018     TRUE 0.725 16.000 0.000 NA   NA
 6954868 6954869 VC0395_0018 VC0395_0019     TRUE 0.985 10.000 0.711 NA   NA
 6954869 6954870 VC0395_0019 VC0395_0020     TRUE 0.865 -30.000 0.158 NA   NA
 6954870 6954871 VC0395_0020 VC0395_0021   clpB-2 TRUE 0.974 3.000 0.118 0.020 N NA
 6954871 6954872 VC0395_0021 VC0395_0022 clpB-2   TRUE 0.874 26.000 0.471 NA   NA
 6954872 6954873 VC0395_0022 VC0395_0023     TRUE 0.988 3.000 0.673 NA   NA
 6954873 6954874 VC0395_0023 VC0395_0024     TRUE 0.577 -48.000 0.059 NA   NA
 6954874 6954875 VC0395_0024 VC0395_0025     TRUE 0.989 7.000 0.765 NA   NA
 6954875 6954876 VC0395_0025 VC0395_0026     TRUE 0.991 3.000 0.862 NA   NA
 6954876 6954877 VC0395_0026 VC0395_0027     TRUE 0.985 3.000 0.510 NA   NA
 6954877 6954878 VC0395_0027 VC0395_0028     TRUE 0.921 27.000 0.863 NA   NA
 6954878 6954879 VC0395_0028 VC0395_0029     TRUE 0.985 6.000 0.552 NA   NA
 6954879 6954880 VC0395_0029 VC0395_0030     TRUE 0.988 3.000 0.627 NA   NA
 6954880 6954881 VC0395_0030 VC0395_0031     TRUE 0.865 41.000 0.821 NA   NA
 6954881 6954882 VC0395_0031 VC0395_0032     TRUE 0.646 20.000 0.000 NA   NA
 6954882 6954883 VC0395_0032 VC0395_0033     FALSE 0.005 432.000 0.000 NA   NA
 6954883 6954884 VC0395_0033 VC0395_0034     TRUE 0.737 68.000 0.545 NA   NA
 6954887 6954888 VC0395_0037 VC0395_0038     FALSE 0.213 176.000 0.278 NA   NA
 6954888 6954889 VC0395_0038 VC0395_0039   pspE TRUE 0.878 0.000 0.130 NA N NA
 6954890 6954891 VC0395_0040 VC0395_0041   pncB FALSE 0.139 31.000 0.021 1.000   NA
 6954893 6954894 VC0395_0043 VC0395_0044     TRUE 0.837 43.000 0.700 NA   NA
 6954894 6954895 VC0395_0044 VC0395_0045     FALSE 0.016 269.000 0.000 NA   NA
 6954895 6954896 VC0395_0045 VC0395_0046     FALSE 0.027 228.000 0.000 NA   NA
 6954897 6954898 VC0395_0047 VC0395_0049     FALSE 0.276 30.000 0.057 NA   NA
 6954903 6954904 VC0395_0053 VC0395_0054     TRUE 0.704 74.000 0.471 NA   NA
 6954904 6954905 VC0395_0054 VC0395_0055     FALSE 0.231 101.000 0.100 NA   NA
 6954908 6954909 VC0395_0058 VC0395_0059     FALSE 0.013 268.000 0.130 1.000 N NA
 6954910 6954911 VC0395_0060 VC0395_0061     FALSE 0.036 192.000 0.098 1.000   NA
 6954912 6954913 VC0395_0062 VC0395_0063     FALSE 0.004 436.000 0.000 1.000   NA
 6954913 6954914 VC0395_0063 VC0395_0064     FALSE 0.012 291.000 0.000 1.000   NA
 6954914 6954915 VC0395_0064 VC0395_0065     TRUE 0.985 -3.000 0.846 1.000   NA
 6954916 6954917 VC0395_0066 VC0395_0067 pstB-2 pstA-2 TRUE 0.975 29.000 0.428 0.003 Y NA
 6954917 6954918 VC0395_0067 VC0395_0068 pstA-2 pstC-2 TRUE 0.995 0.000 0.219 0.003 Y NA
 6954918 6954919 VC0395_0068 VC0395_0069 pstC-2 pstS TRUE 0.845 15.000 0.040 1.000 Y NA
 6954921 6954922 VC0395_0071 VC0395_0072     TRUE 0.985 -3.000 0.750 NA   NA
 6954922 6954923 VC0395_0072 VC0395_0073     TRUE 0.931 -3.000 0.173 NA   NA
 6954923 6954924 VC0395_0073 VC0395_0074   hutR TRUE 0.880 10.000 0.154 1.000 N NA
 6954924 6954925 VC0395_0074 VC0395_0075 hutR ptrB TRUE 0.980 0.000 0.600 1.000 N NA
 6954925 6954926 VC0395_0075 VC0395_0076 ptrB   FALSE 0.013 213.000 0.000 1.000 N NA
 6954926 6954927 VC0395_0076 VC0395_0077     FALSE 0.342 46.000 0.000 NA   NA
 6954929 6954930 VC0395_0079 VC0395_0080   phrB-2 TRUE 0.596 9.000 0.023 1.000   NA
 6954930 6954931 VC0395_0080 VC0395_0081 phrB-2   FALSE 0.201 10.000 0.025 1.000 N NA
 6954931 6954932 VC0395_0081 VC0395_0082     TRUE 0.847 -10.000 0.119 NA   NA
 6954933 6954934 VC0395_0083 VC0395_0084 deoD-2   TRUE 0.965 -28.000 0.636 1.000   NA
 6954934 6954935 VC0395_0084 VC0395_0085     FALSE 0.372 119.000 0.182 1.000   NA
 6954935 6954936 VC0395_0085 VC0395_0086     TRUE 0.985 -19.000 0.385 0.013   NA
 6954936 6954937 VC0395_0086 VC0395_0087     FALSE 0.394 135.000 0.231 NA   NA
 6954937 6954938 VC0395_0087 VC0395_0088     TRUE 0.963 0.000 0.238 NA   NA
 6954939 6954940 VC0395_0089 VC0395_0090     FALSE 0.025 233.000 0.000 NA   NA
 6954942 6954943 VC0395_0092 VC0395_0093     FALSE 0.256 198.000 0.571 NA   NA
 6954944 6954945 VC0395_0094 VC0395_0095     FALSE 0.038 199.000 0.101 NA   NA
 6954945 6954946 VC0395_0095 VC0395_0096     TRUE 0.981 -3.000 0.615 NA   NA
 6954946 6954947 VC0395_0096 VC0395_0097     TRUE 0.892 14.000 0.194 NA   NA
 6954947 6954948 VC0395_0097 VC0395_0098     FALSE 0.009 342.000 0.000 NA   NA
 6954952 6954953 VC0395_0102 VC0395_0103     FALSE 0.419 98.000 0.174 NA   NA
 6954954 6954955 VC0395_0104 VC0395_0105     TRUE 0.974 1.000 0.324 1.000   NA
 6954955 6954956 VC0395_0105 VC0395_0106   chiA-2 FALSE 0.003 377.000 0.000 1.000 N NA
 6954959 6954960 VC0395_0109 VC0395_0110     FALSE 0.110 116.000 0.066 1.000   NA
 6954961 6954962 VC0395_0111 VC0395_0112     FALSE 0.084 103.000 0.024 NA   NA
 6954962 6954963 VC0395_0112 VC0395_0113     TRUE 0.978 1.000 0.357 NA   NA
 6954963 6954964 VC0395_0113 VC0395_0114     TRUE 0.976 -3.000 0.467 NA   NA
 6954964 6954965 VC0395_0114 VC0395_0115   vgrG-2 TRUE 0.893 0.000 0.000 NA   NA
 6954965 6954966 VC0395_0115 VC0395_0116 vgrG-2 hcp-1 FALSE 0.202 128.000 0.000 NA   NA
 6954966 6954967 VC0395_0116 VC0395_0117 hcp-1 glgB FALSE 0.006 395.000 0.000 NA   NA
 6954967 6954968 VC0395_0117 VC0395_0118 glgB malQ FALSE 0.483 206.000 0.235 0.006 Y NA
 6954968 6954969 VC0395_0118 VC0395_0119 malQ malP TRUE 0.905 86.000 0.314 0.018 Y NA
 6954973 6954974 VC0395_0123 VC0395_0124 garR   FALSE 0.139 43.000 0.037 NA   NA
 6954974 6954975 VC0395_0124 VC0395_0125     FALSE 0.448 88.000 0.184 NA   NA
 6954975 6954976 VC0395_0125 VC0395_0126     TRUE 0.589 94.000 0.304 NA   NA
 6954979 6954980 VC0395_0129 VC0395_0130     FALSE 0.037 207.000 0.000 NA   NA
 6954980 6954981 VC0395_0130 VC0395_0131     TRUE 0.985 8.000 0.800 1.000 N NA
 6954983 6954984 VC0395_0133 VC0395_0134     FALSE 0.032 174.000 0.057 NA   NA
 6954984 6954985 VC0395_0134 VC0395_0135     TRUE 0.986 11.000 0.923 NA   NA
 6954985 6954986 VC0395_0135 VC0395_0136     TRUE 0.956 16.000 0.610 NA   NA
 6954986 6954987 VC0395_0136 VC0395_0137     TRUE 0.980 10.000 0.500 NA   NA
 6954987 6954988 VC0395_0137 VC0395_0138     FALSE 0.006 379.000 0.000 1.000   NA
 6954988 6954989 VC0395_0138 VC0395_0139     TRUE 0.976 5.000 0.333 1.000   NA
 6954989 6954990 VC0395_0139 VC0395_0140     TRUE 0.990 -10.000 0.917 1.000 Y NA
 6954991 6954992 VC0395_0141 VC0395_0142     FALSE 0.005 398.000 0.000 1.000   NA
 6954992 6954993 VC0395_0142 VC0395_0143     TRUE 0.945 -81.000 0.472 1.000   NA
 6954993 6954994 VC0395_0143 VC0395_0144     TRUE 0.992 -19.000 0.558 0.052 Y NA
 6954994 6954995 VC0395_0144 VC0395_0145     TRUE 0.993 -7.000 0.431 0.052 Y NA
 6954996 6954997 VC0395_0146 VC0395_0147   cheY-4 TRUE 0.976 11.000 0.216 NA Y NA
 6954997 6954998 VC0395_0147 VC0395_0148 cheY-4 cheA-3 TRUE 0.884 49.000 0.595 1.000 Y NA
 6954998 6954999 VC0395_0148 VC0395_0149 cheA-3 cheW-3 TRUE 0.995 9.000 0.280 0.026 Y NA
 6954999 6955000 VC0395_0149 VC0395_0150 cheW-3 cheW-2 TRUE 0.994 -3.000 0.304 0.026 Y NA
 6955000 6955001 VC0395_0150 VC0395_0151 cheW-2   TRUE 0.988 14.000 0.304 0.026 Y NA
 6955001 6955002 VC0395_0151 VC0395_0152   cheR-3 TRUE 0.975 15.000 0.500 1.000 Y NA
 6955002 6955003 VC0395_0152 VC0395_0153 cheR-3   TRUE 0.878 -61.000 0.078 1.000 Y NA
 6955003 6955004 VC0395_0153 VC0395_0154   cheB-3 TRUE 0.981 -3.000 0.267 1.000 Y NA
 6955004 6955005 VC0395_0154 VC0395_0155 cheB-3   TRUE 0.915 43.000 0.227 0.026 Y NA
 6955005 6955006 VC0395_0155 VC0395_0156     TRUE 0.976 10.000 0.184 NA Y NA
 6955006 6955007 VC0395_0156 VC0395_0157     TRUE 0.918 24.000 0.286 NA Y NA
 6955007 6955008 VC0395_0157 VC0395_0158     FALSE 0.008 259.000 0.000 1.000 N NA
 6955009 6955010 VC0395_0159 VC0395_0160     TRUE 0.855 15.000 0.234 1.000 N NA
 6955010 6955011 VC0395_0160 VC0395_0161     TRUE 0.984 6.000 0.514 NA   NA
 6955011 6955012 VC0395_0161 VC0395_0162     TRUE 0.953 9.000 0.200 NA   NA
 6955014 6955015 VC0395_0164 VC0395_0165     FALSE 0.007 320.000 0.091 1.000   NA
 6955015 6955016 VC0395_0165 VC0395_0166     TRUE 0.722 68.000 0.500 NA   NA
 6955016 6955017 VC0395_0166 VC0395_0167     TRUE 0.967 -33.000 0.667 NA   NA
 6955018 6955019 VC0395_0168 VC0395_0169   putA FALSE 0.004 340.000 0.000 1.000 N NA
 6955019 6955020 VC0395_0169 VC0395_0170 putA   FALSE 0.291 22.000 0.050 1.000   NA
 6955020 6955021 VC0395_0170 VC0395_0171   putP FALSE 0.373 73.000 0.149 1.000   NA
 6955021 6955022 VC0395_0171 VC0395_0172 putP   FALSE 0.011 184.000 0.031 1.000   NA
 6955022 6955023 VC0395_0172 VC0395_0173     FALSE 0.008 343.000 0.000 1.000   NA
 6955023 6955024 VC0395_0173 VC0395_0174     FALSE 0.010 198.000 0.092 1.000 N NA
 6955024 6955025 VC0395_0174 VC0395_0175     FALSE 0.017 173.000 0.092 1.000 N NA
 6955025 6955026 VC0395_0175 VC0395_0176     TRUE 0.591 80.000 0.286 NA   NA
 6955026 6955027 VC0395_0176 VC0395_0177     FALSE 0.013 292.000 0.000 NA   NA
 6955029 6955030 VC0395_0179 VC0395_0180 speF potE TRUE 0.813 68.000 0.391 1.000 Y NA
 6955030 6955031 VC0395_0180 VC0395_0181 potE ribB FALSE 0.002 448.000 0.000 1.000 N NA
 6955032 6955033 VC0395_0182 VC0395_0183     FALSE 0.492 94.000 0.214 NA   NA
 6955034 6955035 VC0395_0184 VC0395_0185     FALSE 0.005 396.000 0.000 1.000   NA
 6955037 6955038 VC0395_0187 VC0395_0188     FALSE 0.387 22.000 0.057 NA   NA
 6955038 6955039 VC0395_0188 VC0395_0189     FALSE 0.021 183.000 0.045 NA   NA
 6955039 6955040 VC0395_0189 VC0395_0191     FALSE 0.092 76.000 0.021 NA   NA
 6955043 6955044 VC0395_0193 VC0395_0194   mtlR FALSE 0.088 114.000 0.041 NA   NA
 6955044 6955045 VC0395_0194 VC0395_0195 mtlR mtlD FALSE 0.512 49.000 0.230 NA N NA
 6955045 6955046 VC0395_0195 VC0395_0196 mtlD mtlA TRUE 0.874 101.000 0.292 0.061 Y NA
 6955046 6955047 VC0395_0196 VC0395_0197 mtlA   FALSE 0.050 139.000 0.025 NA   NA
 6955048 6955049 VC0395_0198 VC0395_0199 tagE-2   TRUE 0.754 -90.000 0.111 NA   NA
 6955050 6955051 VC0395_0200 VC0395_0201     FALSE 0.011 113.000 0.018 1.000 N NA
 6955051 6955052 VC0395_0201 VC0395_0202     TRUE 0.997 1.000 0.771 0.068 Y NA
 6955052 6955053 VC0395_0202 VC0395_0203     TRUE 0.926 36.000 0.771 0.068 N NA
 6955053 6955054 VC0395_0203 VC0395_0204     TRUE 0.977 0.000 0.548 1.000 N NA
 6955057 6955058 VC0395_0207 VC0395_0208     TRUE 0.896 9.000 0.158 1.000 N NA
 6955058 6955059 VC0395_0208 VC0395_0209     FALSE 0.017 268.000 0.000 NA   NA
 6955060 6955061 VC0395_0210 VC0395_0211     FALSE 0.005 461.000 0.000 NA   NA
 6955061 6955062 VC0395_0211 VC0395_0212   glgX FALSE 0.087 135.000 0.059 NA   NA
 6955063 6955064 VC0395_0213 VC0395_0214 lamB   FALSE 0.069 205.000 0.171 1.000   NA
 6955064 6955065 VC0395_0214 VC0395_0215     FALSE 0.172 153.000 0.143 1.000   NA
 6955068 6955069 VC0395_0218 VC0395_0219     FALSE 0.126 79.000 0.052 NA   NA
 6955072 6955073 VC0395_0222 VC0395_0223   ogt TRUE 0.994 1.000 0.217 0.016 Y NA
 6955073 6955074 VC0395_0223 VC0395_0224 ogt   TRUE 0.917 11.000 0.156 NA   NA
 6955076 6955077 VC0395_0226 VC0395_0227     TRUE 0.984 -3.000 0.159 0.003   NA
 6955078 6955079 VC0395_0228 VC0395_0229     FALSE 0.035 27.000 0.035 NA N NA
 6955079 6955080 VC0395_0229 VC0395_0230     FALSE 0.172 161.000 0.208 NA N NA
 6955080 6955081 VC0395_0230 VC0395_0231     FALSE 0.008 256.000 0.000 1.000 N NA
 6955082 6955083 VC0395_0232 VC0395_0233     FALSE 0.010 116.000 0.036 1.000 N NA
 6955084 6955085 VC0395_0234 VC0395_0235     TRUE 0.982 -3.000 0.651 NA   NA
 6955085 6955086 VC0395_0235 VC0395_0236     FALSE 0.456 152.000 0.581 NA N NA
 6955090 6955091 VC0395_0239 VC0395_0241     TRUE 0.786 -22.000 0.000 NA   NA
 6955091 6955092 VC0395_0241 VC0395_0242     FALSE 0.291 131.000 0.150 NA   NA
 6955094 6955095 VC0395_0244 VC0395_0245 nemA grx2 TRUE 0.954 10.000 0.310 1.000 N NA
 6955099 6955100 VC0395_0249 VC0395_0250     FALSE 0.003 358.000 0.000 1.000 N NA
 6955100 6955101 VC0395_0250 VC0395_0251   ppsA FALSE 0.002 183.000 0.015 1.000 N NA
 6955103 6955104 VC0395_0253 VC0395_0254   lldD TRUE 0.599 98.000 0.145 1.000 Y NA
 6955104 6955105 VC0395_0254 VC0395_0255 lldD   FALSE 0.460 125.000 0.109 1.000 Y NA
 6955106 6955107 VC0395_0256 VC0395_0257     FALSE 0.256 100.000 0.000 NA   NA
 6955107 6955108 VC0395_0257 VC0395_0258     FALSE 0.171 154.000 0.192 1.000 N NA
 6955108 6955109 VC0395_0258 VC0395_0259     TRUE 0.574 131.000 0.192 1.000 Y NA
 6955109 6955110 VC0395_0259 VC0395_0260     TRUE 0.974 20.000 0.800 1.000 Y NA
 6955111 6955112 VC0395_0261 VC0395_0262     TRUE 0.957 14.000 0.500 NA   NA
 6955119 6955120 VC0395_0269 VC0395_0270     TRUE 0.716 0.000 0.011 NA   NA
 6955123 6955124 VC0395_0273 VC0395_0274     FALSE 0.123 152.000 0.150 1.000 N NA
 6955126 6955127 VC0395_0276 VC0395_0277     TRUE 0.866 -3.000 0.000 NA   NA
 6955127 6955128 VC0395_0277 VC0395_0278     FALSE 0.041 287.000 0.235 NA   NA
 6955129 6955130 VC0395_0279 VC0395_0280     FALSE 0.293 26.000 0.051 NA   NA
 6955136 6955137 VC0395_0286 VC0395_0287 ppiC   FALSE 0.004 578.000 0.000 1.000   NA
 6955140 6955141 VC0395_0290 VC0395_0291   speG FALSE 0.244 5.000 0.041 NA N NA
 6955141 6955142 VC0395_0291 VC0395_0292 speG malK FALSE 0.012 222.000 0.000 1.000 N NA
 6955142 6955143 VC0395_0292 VC0395_0293 malK   FALSE 0.004 517.000 0.000 NA   NA
 6955144 6955145 VC0395_0294 VC0395_0295 malE malF TRUE 0.574 75.000 0.120 1.000 Y NA
 6955145 6955146 VC0395_0295 VC0395_0296 malF malG TRUE 0.996 12.000 0.814 0.052 Y NA
 6955147 6955148 VC0395_0297 VC0395_0298     FALSE 0.090 84.000 0.025 NA   NA
 6955148 6955149 VC0395_0298 VC0395_0299     FALSE 0.004 164.000 0.038 NA N NA
 6955149 6955150 VC0395_0299 VC0395_0300     FALSE 0.178 152.000 0.048 0.090 N NA
 6955150 6955151 VC0395_0300 VC0395_0301     TRUE 0.662 119.000 0.667 NA N NA
 6955153 6955154 VC0395_0302 VC0395_0304     FALSE 0.034 212.000 0.000 NA   NA
 6955154 6955155 VC0395_0304 VC0395_0305     FALSE 0.008 352.000 0.000 NA   NA
 6955155 6955156 VC0395_0305 VC0395_0306     FALSE 0.256 100.000 0.000 NA   NA
 6955157 6955158 VC0395_0307 VC0395_0308     FALSE 0.270 23.000 0.025 NA   NA
 6955158 6955159 VC0395_0308 VC0395_0309   rumB FALSE 0.026 165.000 0.025 NA   NA
 6955160 6955161 VC0395_0310 VC0395_0311     TRUE 0.959 -3.000 0.273 NA   NA
 6955164 6955165 VC0395_0314 VC0395_0315     TRUE 0.710 26.000 0.182 NA   NA
 6955166 6955167 VC0395_0316 VC0395_0317     TRUE 0.736 63.000 0.500 NA   NA
 6955169 6955170 VC0395_0319 VC0395_0320     FALSE 0.039 203.000 0.000 NA   NA
 6955172 6955173 VC0395_0322 VC0395_0323 hmuV   TRUE 0.938 0.000 0.029 1.000 Y NA
 6955173 6955174 VC0395_0323 VC0395_0324   hutB TRUE 0.991 12.000 0.852 1.000 Y NA
 6955174 6955175 VC0395_0324 VC0395_0325 hutB exbD1 TRUE 0.768 11.000 0.117 1.000 N NA
 6955175 6955176 VC0395_0325 VC0395_0326 exbD1 exbB1 TRUE 0.995 -3.000 0.551 0.067 Y NA
 6955176 6955177 VC0395_0326 VC0395_0327 exbB1 tonB1 TRUE 0.992 0.000 0.473 0.015 N NA
 6955178 6955179 VC0395_0328 VC0395_0329 hutW hutX TRUE 0.698 24.000 0.203 NA N NA
 6955179 6955180 VC0395_0329 VC0395_0330 hutX hutZ TRUE 0.928 25.000 0.355 NA Y NA
 6955180 6955181 VC0395_0330 VC0395_0331 hutZ   FALSE 0.005 306.000 0.000 1.000 N NA
 6955181 6955182 VC0395_0331 VC0395_0332     FALSE 0.270 141.000 0.040 NA Y NA
 6955182 6955183 VC0395_0332 VC0395_0333     FALSE 0.075 159.000 0.120 NA N NA
 6955183 6955184 VC0395_0333 VC0395_0334     TRUE 0.865 19.000 0.109 1.000 Y NA
 6955184 6955185 VC0395_0334 VC0395_0335     FALSE 0.090 136.000 0.063 NA   NA
 6955186 6955187 VC0395_0336 VC0395_0337     TRUE 0.907 -6.000 0.169 1.000   NA
 6955187 6955188 VC0395_0337 VC0395_0338     FALSE 0.017 268.000 0.000 NA   NA
 6955188 6955189 VC0395_0338 VC0395_0339   gnd FALSE 0.038 156.000 0.009 NA   NA
 6955189 6955190 VC0395_0339 VC0395_0340 gnd pgl TRUE 0.973 14.000 0.039 0.002 Y NA
 6955190 6955191 VC0395_0340 VC0395_0341 pgl zwf TRUE 0.973 -3.000 0.188 1.000 Y NA
 6955191 6955192 VC0395_0341 VC0395_0342 zwf   FALSE 0.004 344.000 0.000 NA N NA
 6955192 6955193 VC0395_0342 VC0395_0343     TRUE 0.866 -3.000 0.000 NA   NA
 6955194 6955195 VC0395_0344 VC0395_0345     TRUE 0.869 -49.000 0.245 1.000 N NA
 6955195 6955196 VC0395_0345 VC0395_0346     FALSE 0.334 106.000 0.132 NA   NA
 6955196 6955197 VC0395_0346 VC0395_0347     TRUE 0.554 112.000 0.286 NA   NA
 6955198 6955199 VC0395_0348 VC0395_0349     FALSE 0.189 -6.000 0.058 NA N NA
 6955199 6955200 VC0395_0349 VC0395_0350     TRUE 0.868 100.000 0.267 0.051 Y NA
 6955200 6955201 VC0395_0350 VC0395_0351     TRUE 0.909 -22.000 0.208 NA   NA
 6955202 6955203 VC0395_0352 VC0395_0353 kbl tdh TRUE 0.980 3.000 0.547 1.000 N NA
 6955204 6955205 VC0395_0354 VC0395_0355     TRUE 0.855 51.000 1.000 NA   NA
 6955205 6955206 VC0395_0355 VC0395_0356     TRUE 0.976 13.000 0.800 NA   NA
 6955206 6955207 VC0395_0356 VC0395_0357     TRUE 0.977 12.000 0.667 NA   NA
 6955207 6955208 VC0395_0357 VC0395_0358     TRUE 0.912 25.000 0.667 NA   NA
 6955208 6955209 VC0395_0358 VC0395_0359     FALSE 0.004 629.000 0.000 NA   NA
 6955209 6955210 VC0395_0359 VC0395_0360     TRUE 0.593 108.000 0.333 1.000   NA
 6955210 6955211 VC0395_0360 VC0395_0361   dsdC FALSE 0.005 300.000 0.000 1.000 N NA
 6955213 6955214 VC0395_0363 VC0395_0364   cydB-2 FALSE 0.003 822.000 0.000 NA   NA
 6955214 6955215 VC0395_0364 VC0395_0365 cydB-2 cydA-2 TRUE 0.992 13.000 0.500 0.043 Y NA
 6955217 6955218 VC0395_0367 VC0395_0368   pbpG FALSE 0.010 235.000 0.000 1.000 N NA
 6955218 6955219 VC0395_0368 VC0395_0369 pbpG   FALSE 0.004 531.000 0.000 NA   NA
 6955220 6955221 VC0395_0370 VC0395_0371 ompW hap FALSE 0.002 421.000 0.000 1.000 N NA
 6955222 6955223 VC0395_0372 VC0395_0373     FALSE 0.008 361.000 0.000 NA   NA
 6955223 6955224 VC0395_0373 VC0395_0374   fadL-3 TRUE 0.816 16.000 0.146 NA   NA
 6955226 6955227 VC0395_0376 VC0395_0377   malS TRUE 0.563 -58.000 0.057 NA   NA
 6955229 6955230 VC0395_0379 VC0395_0380     TRUE 0.991 1.000 1.000 NA   NA
 6955231 6955232 VC0395_0381 VC0395_0382     TRUE 0.989 9.000 0.882 NA   NA
 6955232 6955233 VC0395_0382 VC0395_0383     TRUE 0.973 -12.000 0.824 NA N NA
 6955233 6955234 VC0395_0383 VC0395_0384     TRUE 0.983 11.000 0.737 NA   NA
 6955234 6955235 VC0395_0384 VC0395_0385     TRUE 0.986 5.000 0.579 NA   NA
 6955235 6955236 VC0395_0385 VC0395_0386     TRUE 0.973 1.000 0.293 NA   NA
 6955236 6955237 VC0395_0386 VC0395_0387     TRUE 0.742 160.000 0.317 0.030 Y NA
 6955237 6955238 VC0395_0387 VC0395_0388     FALSE 0.012 300.000 0.000 NA   NA
 6955238 6955239 VC0395_0388 VC0395_0389     FALSE 0.316 131.000 0.167 NA   NA
 6955242 6955243 VC0395_0392 VC0395_0393   gapA-2 FALSE 0.031 214.000 0.000 NA   NA
 6955245 6955246 VC0395_0395 VC0395_0396     FALSE 0.004 725.000 0.000 NA   NA
 6955247 6955248 VC0395_0397 VC0395_0398     FALSE 0.035 155.000 0.018 NA   NA
 6955248 6955249 VC0395_0398 VC0395_0399     FALSE 0.097 138.000 0.069 NA   NA
 6955249 6955250 VC0395_0399 VC0395_0400     FALSE 0.358 38.000 0.098 NA   NA
 6955251 6955252 VC0395_0401 VC0395_0402     FALSE 0.530 137.000 0.581 1.000 N NA
 6955254 6955255 VC0395_0404 VC0395_0405     TRUE 0.941 2.000 0.148 NA   NA
 6955255 6955256 VC0395_0405 VC0395_0406   acs-2 FALSE 0.013 74.000 0.060 1.000 N NA
 6955257 6955258 VC0395_0407 VC0395_0408 phhA phhB TRUE 0.882 -10.000 0.203 1.000 N NA
 6955258 6955259 VC0395_0408 VC0395_0409 phhB ectA FALSE 0.003 701.000 0.000 1.000   NA
 6955259 6955260 VC0395_0409 VC0395_0410 ectA ectB TRUE 0.982 24.000 0.793 0.001   NA
 6955260 6955261 VC0395_0410 VC0395_0411 ectB ectC TRUE 0.833 36.000 0.572 1.000   NA
 6955261 6955262 VC0395_0411 VC0395_0412 ectC   TRUE 0.911 -3.000 0.149 1.000   NA
 6955263 6955264 VC0395_0413 VC0395_0414   groEL FALSE 0.181 33.000 0.031 NA   NA
 6955264 6955265 VC0395_0414 VC0395_0415 groEL groES TRUE 0.684 29.000 0.069 1.000 Y NA
 6955265 6955266 VC0395_0415 VC0395_0416 groES   FALSE 0.017 202.000 0.000 1.000 N NA
 6955266 6955267 VC0395_0416 VC0395_0417     TRUE 0.822 3.000 0.065 NA   NA
 6955268 6955269 VC0395_0418 VC0395_0419   speA FALSE 0.101 70.000 0.012 NA   NA
 6955269 6955270 VC0395_0419 VC0395_0420 speA speB TRUE 0.949 1.000 0.055 1.000 Y NA
 6955271 6955272 VC0395_0421 VC0395_0422     TRUE 0.822 35.000 0.111 0.005   NA
 6955272 6955273 VC0395_0422 VC0395_0423     FALSE 0.009 328.000 0.000 1.000   NA
 6955274 6955275 VC0395_0424 VC0395_0425     FALSE 0.018 186.000 0.009 NA   NA
 6955275 6955276 VC0395_0425 VC0395_0426     FALSE 0.014 274.000 0.000 1.000   NA
 6955280 6955281 VC0395_0430 VC0395_0431 deaD   FALSE 0.006 144.000 0.007 1.000 N NA
 6955281 6955282 VC0395_0431 VC0395_0432     FALSE 0.229 91.000 0.140 1.000 N NA
 6955283 6955284 VC0395_0433 VC0395_0434 gsk-2 creA FALSE 0.114 119.000 0.060 NA   NA
 6955285 6955286 VC0395_0435 VC0395_0436     TRUE 0.550 139.000 0.471 NA   NA
 6955287 6955288 VC0395_0437 VC0395_0438     FALSE 0.082 238.000 0.000 0.058   NA
 6955288 6955289 VC0395_0438 VC0395_0439     FALSE 0.031 215.000 0.000 NA   NA
 6955289 6955290 VC0395_0439 VC0395_0440     TRUE 0.991 1.000 1.000 NA   NA
 6955291 6955292 VC0395_0441 VC0395_0442 orfA orfB TRUE 0.982 -3.000 0.000 0.058 Y NA
 6955294 6955295 VC0395_0444 VC0395_0445   nrdD FALSE 0.004 463.000 0.000 1.000   NA
 6955295 6955296 VC0395_0445 VC0395_0446 nrdD nrdG TRUE 0.976 5.000 0.464 1.000 N NA
 6955296 6955297 VC0395_0446 VC0395_0447 nrdG   FALSE 0.010 122.000 0.054 1.000 N NA
 6955297 6955298 VC0395_0447 VC0395_0448     TRUE 0.543 58.000 0.288 1.000 N NA
 6955299 6955300 VC0395_0449 VC0395_0450 fruA-2 fruK TRUE 0.983 13.000 0.562 1.000 Y NA
 6955300 6955301 VC0395_0450 VC0395_0451 fruK fruB TRUE 0.960 11.000 0.130 1.000 Y NA
 6955302 6955303 VC0395_0452 VC0395_0453 fruR   FALSE 0.016 54.000 0.012 1.000 N NA
 6955303 6955304 VC0395_0453 VC0395_0454     TRUE 0.994 2.000 0.669 NA Y NA
 6955304 6955305 VC0395_0454 VC0395_0455   luxN FALSE 0.012 97.000 0.014 NA N NA
 6955306 6955307 VC0395_0456 VC0395_0457     FALSE 0.019 197.000 0.000 1.000 N NA
 6955307 6955308 VC0395_0457 VC0395_0458     TRUE 0.945 -9.000 0.000 0.072   NA
 6955308 6955309 VC0395_0458 VC0395_0459     FALSE 0.088 147.000 0.085 1.000   NA
 6955314 6955315 VC0395_0464 VC0395_0465     TRUE 0.970 -10.000 0.571 1.000   NA
 6955315 6955316 VC0395_0465 VC0395_0466   tatA-2 FALSE 0.045 200.000 0.160 1.000 N NA
 6955319 6955320 VC0395_0469 VC0395_0470     TRUE 0.704 133.000 0.800 NA   NA
 6955320 6955321 VC0395_0470 VC0395_0471     FALSE 0.010 327.000 0.000 NA   NA
 6955322 6955323 VC0395_0472 VC0395_0473     TRUE 0.983 -3.000 0.676 NA   NA
 6955325 6955326 VC0395_0475 VC0395_0476     FALSE 0.101 162.000 0.109 NA   NA
 6955328 6955329 VC0395_0478 VC0395_0479     FALSE 0.002 559.000 0.000 1.000 N NA
 6955329 6955330 VC0395_0479 VC0395_0480     FALSE 0.012 304.000 0.000 NA   NA
 6955330 6955331 VC0395_0480 VC0395_0482     TRUE 0.689 29.000 0.188 NA   NA
 6955334 6955335 VC0395_0484 VC0395_0485     FALSE 0.168 168.000 0.176 NA   NA
 6955335 6955336 VC0395_0485 VC0395_0486     FALSE 0.002 411.000 0.039 NA   NA
 6955336 6955337 VC0395_0486 VC0395_0487     TRUE 0.650 58.000 0.308 NA   NA
 6955338 6955339 VC0395_0488 VC0395_0489     FALSE 0.016 270.000 0.000 NA   NA
 6955339 6955340 VC0395_0489 VC0395_0490     FALSE 0.213 124.000 0.000 NA   NA
 6955340 6955341 VC0395_0490 VC0395_0492     FALSE 0.256 97.000 0.000 NA   NA
 6955341 6955342 VC0395_0492 VC0395_0494     FALSE 0.260 75.000 0.103 NA   NA
 6955344 6955345 VC0395_0495 VC0395_0496     TRUE 0.947 10.000 0.196 NA   NA
 6955345 6955346 VC0395_0496 VC0395_0497   pntA FALSE 0.013 293.000 0.000 NA   NA
 6955346 6955347 VC0395_0497 VC0395_0498 pntA pntB TRUE 0.997 12.000 0.745 0.001 Y NA
 6955347 6955348 VC0395_0498 VC0395_0499 pntB   FALSE 0.012 101.000 0.066 1.000 N NA
 6955348 6955349 VC0395_0499 VC0395_0500     TRUE 0.985 -106.000 0.944 1.000 Y NA
 6955349 6955350 VC0395_0500 VC0395_0501     TRUE 0.963 -3.000 0.294 NA   NA
 6955350 6955351 VC0395_0501 VC0395_0502     TRUE 0.643 61.000 0.308 NA   NA
 6955351 6955352 VC0395_0502 VC0395_0503     TRUE 0.667 41.000 0.250 NA   NA
 6955353 6955354 VC0395_0504 VC0395_0505     FALSE 0.005 470.000 0.000 NA   NA
 6955355 6955356 VC0395_0506 VC0395_0507 rstA1 rstB2 TRUE 0.786 -22.000 0.000 NA   NA
 6955356 6955357 VC0395_0507 VC0395_0508 rstB2 cep FALSE 0.173 136.000 0.000 NA   NA
 6955357 6955358 VC0395_0508 VC0395_0509 cep   TRUE 0.858 11.000 0.000 NA   NA
 6955358 6955359 VC0395_0509 VC0395_0510   ace TRUE 0.866 -3.000 0.000 NA   NA
 6955359 6955360 VC0395_0510 VC0395_0511 ace zot TRUE 0.866 -3.000 0.000 NA   NA
 6955360 6955361 VC0395_0511 VC0395_0512 zot ctxA FALSE 0.221 120.000 0.000 NA   NA
 6955362 6955363 VC0395_0513 VC0395_0514     FALSE 0.479 -61.000 0.041 NA   NA
 6955363 6955364 VC0395_0514 VC0395_0515   ddl FALSE 0.016 186.000 0.015 NA   NA
 6955364 6955365 VC0395_0515 VC0395_0516 ddl   FALSE 0.048 151.000 0.007 NA   NA
 6955369 6955370 VC0395_0520 VC0395_0521     FALSE 0.007 364.000 0.000 1.000   NA
 6955370 6955371 VC0395_0521 VC0395_0522     TRUE 0.679 81.000 0.414 NA   NA
 6955377 6955378 VC0395_0528 VC0395_0529     TRUE 0.995 12.000 0.314 0.001 Y NA
 6955379 6955380 VC0395_0530 VC0395_0531     TRUE 0.917 -3.000 0.147 NA   NA
 6955381 6955382 VC0395_0532 VC0395_0533     TRUE 0.984 -3.000 0.758 1.000   NA
 6955382 6955383 VC0395_0533 VC0395_0534     TRUE 0.994 -3.000 0.833 0.050   NA
 6955383 6955384 VC0395_0534 VC0395_0535     TRUE 0.995 9.000 0.848 0.050   NA
 6955384 6955385 VC0395_0535 VC0395_0536     FALSE 0.028 196.000 0.121 1.000 N NA
 6955385 6955386 VC0395_0536 VC0395_0537     FALSE 0.325 54.000 0.109 NA   NA
 6955390 6955391 VC0395_0541 VC0395_0542     TRUE 0.719 66.000 0.478 NA   NA
 6955391 6955392 VC0395_0542 VC0395_0543     TRUE 0.875 25.000 0.609 1.000 N NA
 6955392 6955393 VC0395_0543 VC0395_0544     TRUE 0.982 -67.000 0.762 0.050 N NA
 6955393 6955394 VC0395_0544 VC0395_0545     TRUE 0.758 98.000 0.333 0.050 N NA
 6955395 6955396 VC0395_0546 VC0395_0547 phnW   TRUE 0.943 18.000 0.037 0.016 Y NA
 6955396 6955397 VC0395_0547 VC0395_0548   phnX TRUE 0.624 7.000 0.018 1.000   NA
 6955397 6955398 VC0395_0548 VC0395_0549 phnX   FALSE 0.019 165.000 0.030 1.000   NA
 6955400 6955401 VC0395_0551 VC0395_0552   elbB TRUE 0.714 5.000 0.028 NA   NA
 6955401 6955402 VC0395_0552 VC0395_0553 elbB   FALSE 0.053 137.000 0.028 NA   NA
 6955402 6955403 VC0395_0553 VC0395_0554   mscL TRUE 0.686 -3.000 0.007 NA   NA
 6955403 6955404 VC0395_0554 VC0395_0555 mscL   FALSE 0.214 33.000 0.007 NA   NA
 6955404 6955405 VC0395_0555 VC0395_0556   fhs TRUE 0.762 85.000 0.667 NA   NA
 6955405 6955406 VC0395_0556 VC0395_0557 fhs   FALSE 0.061 128.000 0.095 1.000 N NA
 6955408 6955409 VC0395_0559 VC0395_0560 moeA-2 moeB TRUE 0.997 3.000 0.323 0.004 Y NA
 6955409 6955410 VC0395_0560 VC0395_0561 moeB   FALSE 0.016 184.000 0.025 NA   NA
 6955410 6955411 VC0395_0561 VC0395_0562     TRUE 0.595 22.000 0.106 NA   NA
 6955413 6955414 VC0395_0564 VC0395_0565 talB tktA-2 TRUE 0.609 49.000 0.000 1.000 Y NA
 6955417 6955418 VC0395_0568 VC0395_0569     FALSE 0.041 200.000 0.000 NA   NA
 6955418 6955419 VC0395_0569 VC0395_0570     FALSE 0.374 41.000 0.000 NA   NA
 6955421 6955422 VC0395_0572 VC0395_0573     TRUE 0.734 13.000 0.087 NA   NA
 6955422 6955423 VC0395_0573 VC0395_0574     TRUE 0.893 16.000 0.087 0.058   NA
 6955423 6955424 VC0395_0574 VC0395_0575     TRUE 0.706 33.000 0.240 1.000   NA
 6955424 6955425 VC0395_0575 VC0395_0576   glpM FALSE 0.464 40.000 0.128 NA   NA
 6955425 6955426 VC0395_0576 VC0395_0577 glpM   FALSE 0.127 56.000 0.043 NA   NA
 6955427 6955428 VC0395_0578 VC0395_0580     TRUE 0.659 10.000 0.024 NA   NA
 6955429 6955430 VC0395_0579 VC0395_0581     TRUE 0.974 4.000 0.312 1.000   NA
 6955430 6955431 VC0395_0581 VC0395_0582     FALSE 0.015 216.000 0.000 NA N NA
 6955431 6955432 VC0395_0582 VC0395_0583     TRUE 0.888 -43.000 0.259 NA N NA
 6955432 6955433 VC0395_0583 VC0395_0584     FALSE 0.383 110.000 0.159 NA   NA
 6955433 6955434 VC0395_0584 VC0395_0585     TRUE 0.956 5.000 0.188 NA   NA
 6955434 6955435 VC0395_0585 VC0395_0586     TRUE 0.733 17.000 0.115 NA   NA
 6955436 6955437 VC0395_0587 VC0395_0588     FALSE 0.100 66.000 0.031 NA   NA
 6955438 6955439 VC0395_0589 VC0395_0590     FALSE 0.153 116.000 0.077 NA   NA
 6955439 6955440 VC0395_0590 VC0395_0591     TRUE 0.876 -75.000 0.190 NA   NA
 6955440 6955441 VC0395_0591 VC0395_0592     TRUE 0.963 11.000 0.312 NA   NA
 6955441 6955442 VC0395_0592 VC0395_0593     TRUE 0.982 0.000 0.488 NA   NA
 6955442 6955443 VC0395_0593 VC0395_0594     TRUE 0.628 89.000 0.341 NA   NA
 6955443 6955444 VC0395_0594 VC0395_0595     TRUE 0.974 -3.000 0.421 NA   NA
 6955447 6955448 VC0395_0598 VC0395_0599   cscA FALSE 0.020 76.000 0.070 1.000 N NA
 6955451 6955452 VC0395_0602 VC0395_0603     FALSE 0.042 186.000 0.130 1.000 N NA
 6955455 6955456 VC0395_0606 VC0395_0607   dcuC FALSE 0.002 394.000 0.000 1.000 N NA
 6955457 6955458 VC0395_0608 VC0395_0609 sdaA-2   TRUE 0.964 -49.000 0.300 1.000 Y NA
 6955459 6955460 VC0395_0610 VC0395_0611     TRUE 0.663 97.000 0.417 NA   NA
 6955460 6955461 VC0395_0611 VC0395_0612     FALSE 0.023 240.000 0.000 NA   NA
 6955462 6955463 VC0395_0613 VC0395_0614 narP narQ TRUE 0.971 -10.000 0.051 0.029 Y NA
 6955464 6955465 VC0395_0615 VC0395_0616 napF napD TRUE 0.961 6.000 0.209 NA   NA
 6955465 6955466 VC0395_0616 VC0395_0617 napD napA TRUE 0.959 -3.000 0.348 NA N NA
 6955466 6955467 VC0395_0617 VC0395_0618 napA napB TRUE 0.993 7.000 0.643 NA Y NA
 6955467 6955468 VC0395_0618 VC0395_0619 napB napC TRUE 0.944 18.000 0.245 NA Y NA
 6955468 6955469 VC0395_0619 VC0395_0620 napC   TRUE 0.977 12.000 0.667 NA   NA
 6955471 6955472 VC0395_0622 VC0395_0623 uhpA uhpB TRUE 0.998 3.000 0.900 0.029 Y NA
 6955472 6955473 VC0395_0623 VC0395_0624 uhpB uhpC TRUE 0.794 68.000 0.389 0.070 N NA
 6955473 6955474 VC0395_0624 VC0395_0625 uhpC   TRUE 0.696 113.000 0.259 0.049 N NA
 6955474 6955475 VC0395_0625 VC0395_0626     TRUE 0.933 104.000 0.667 0.049 Y NA
 6955475 6955476 VC0395_0626 VC0395_0627   fbpC TRUE 0.935 12.000 0.000 0.049 N NA
 6955477 6955478 VC0395_0628 VC0395_0629 phaC   FALSE 0.508 58.000 0.187 NA   NA
 6955478 6955479 VC0395_0629 VC0395_0630     TRUE 0.886 30.000 0.652 NA   NA
 6955479 6955480 VC0395_0630 VC0395_0631     TRUE 0.988 13.000 0.812 1.000 Y NA
 6955480 6955481 VC0395_0631 VC0395_0632   secF-2 FALSE 0.002 671.000 0.000 1.000 N NA
 6955481 6955482 VC0395_0632 VC0395_0633 secF-2 secD TRUE 0.997 4.000 0.366 0.002 Y NA
 6955482 6955483 VC0395_0633 VC0395_0634 secD   FALSE 0.409 72.000 0.155 NA   NA
 6955483 6955484 VC0395_0634 VC0395_0635     TRUE 0.558 77.000 0.250 NA   NA
 6955485 6955486 VC0395_0636 VC0395_0637   glgC FALSE 0.005 303.000 0.000 1.000 N NA
 6955488 6955489 VC0395_0639 VC0395_0640     FALSE 0.006 386.000 0.000 NA   NA
 6955489 6955490 VC0395_0640 VC0395_0642     FALSE 0.249 79.000 0.000 1.000   NA
 6955491 6955492 VC0395_0641 VC0395_0643     TRUE 0.948 -82.000 0.211 1.000 Y NA
 6955492 6955493 VC0395_0643 VC0395_0644     TRUE 0.712 -3.000 0.105 1.000 N NA
 6955493 6955494 VC0395_0644 VC0395_0645     TRUE 0.901 1.000 0.000 NA   NA
 6955495 6955496 VC0395_0646 VC0395_0647   pykA-2 TRUE 0.695 122.000 0.267 NA Y NA
 6955498 6955499 VC0395_0649 VC0395_0650 torT mgsA FALSE 0.498 55.000 0.049 NA Y NA
 6955500 6955501 VC0395_0651 VC0395_0652 pncA   FALSE 0.084 122.000 0.007 NA   NA
 6955502 6955503 VC0395_0653 VC0395_0654 dgkA   FALSE 0.119 140.000 0.089 NA   NA
 6955503 6955504 VC0395_0654 VC0395_0655     TRUE 0.974 -7.000 0.562 NA   NA
 6955507 6955508 VC0395_0658 VC0395_0659     TRUE 0.763 -3.000 0.077 1.000   NA
 6955509 6955510 VC0395_0660 VC0395_0661     TRUE 0.602 57.000 0.250 NA   NA
 6955510 6955511 VC0395_0661 VC0395_0662     FALSE 0.414 87.000 0.167 NA   NA
 6955512 6955513 VC0395_0663 VC0395_0664 modC modB TRUE 0.995 14.000 0.537 0.001 Y NA
 6955513 6955514 VC0395_0664 VC0395_0665 modB modA TRUE 0.991 1.000 0.035 0.001 Y NA
 6955514 6955515 VC0395_0665 VC0395_0666 modA cobQ FALSE 0.240 6.000 0.010 1.000 N NA
 6955515 6955516 VC0395_0666 VC0395_0667 cobQ   FALSE 0.004 774.000 0.000 NA   NA
 6955516 6955517 VC0395_0667 VC0395_0668     FALSE 0.012 300.000 0.000 NA   NA
 6955518 6955519 VC0395_0669 VC0395_0670     FALSE 0.030 217.000 0.000 NA   NA
 6955519 6955520 VC0395_0670 VC0395_0672     FALSE 0.043 199.000 0.000 NA   NA
 6955521 6955522 VC0395_0671 VC0395_0673 luxQ luxP TRUE 0.552 18.000 0.111 NA N NA
 6955522 6955523 VC0395_0673 VC0395_0674 luxP   FALSE 0.034 212.000 0.000 NA   NA
 6955523 6955524 VC0395_0674 VC0395_0675     FALSE 0.322 21.000 0.036 NA   NA
 6955524 6955525 VC0395_0675 VC0395_0676     TRUE 0.844 0.000 0.082 NA   NA
 6955525 6955526 VC0395_0676 VC0395_0677     FALSE 0.295 42.000 0.089 NA   NA
 6955526 6955527 VC0395_0677 VC0395_0678     TRUE 0.954 -7.000 0.308 NA   NA
 6955528 6955529 VC0395_0679 VC0395_0680     TRUE 0.805 0.000 0.066 NA   NA
 6955529 6955530 VC0395_0680 VC0395_0681     FALSE 0.018 264.000 0.000 NA   NA
 6955531 6955532 VC0395_0682 VC0395_0683 glpK glpF FALSE 0.008 130.000 0.032 1.000 N NA
 6955532 6955533 VC0395_0683 VC0395_0684 glpF   FALSE 0.009 338.000 0.000 NA   NA
 6955533 6955534 VC0395_0684 VC0395_0685     TRUE 0.866 -3.000 0.000 NA   NA
 6955535 6955536 VC0395_0686 VC0395_0687 glpA glpB TRUE 0.995 -3.000 0.650 0.001 N NA
 6955536 6955537 VC0395_0687 VC0395_0688 glpB glpC TRUE 0.994 -3.000 0.547 0.001 N NA
 6955539 6955540 VC0395_0690 VC0395_0691 trxC   FALSE 0.018 189.000 0.047 NA   NA
 6955540 6955541 VC0395_0691 VC0395_0692     FALSE 0.203 85.000 0.120 NA N NA
 6955542 6955543 VC0395_0693 VC0395_0694     FALSE 0.541 25.000 0.000 NA   NA
 6955543 6955544 VC0395_0694 VC0395_0695     FALSE 0.256 100.000 0.000 NA   NA
 6955544 6955545 VC0395_0695 VC0395_0696     FALSE 0.508 -22.000 0.033 NA   NA
 6955547 6955548 VC0395_0698 VC0395_0699 artM artQ TRUE 0.997 -3.000 0.714 0.019 Y NA
 6955548 6955549 VC0395_0699 VC0395_0700 artQ artI TRUE 0.995 2.000 0.273 0.049 Y NA
 6955549 6955550 VC0395_0700 VC0395_0701 artI artP TRUE 0.790 74.000 0.339 1.000 Y NA
 6955550 6955551 VC0395_0701 VC0395_0702 artP   FALSE 0.015 281.000 0.000 NA   NA
 6955551 6955552 VC0395_0702 VC0395_0703   yieM FALSE 0.028 224.000 0.000 NA   NA
 6955552 6955553 VC0395_0703 VC0395_0704 yieM   TRUE 0.837 9.000 0.082 NA   NA
 6955554 6955555 VC0395_0705 VC0395_0706   ybjU FALSE 0.125 -15.000 0.025 1.000 N NA
 6955555 6955556 VC0395_0706 VC0395_0707 ybjU   FALSE 0.185 -3.000 0.031 1.000 N NA
 6955556 6955557 VC0395_0707 VC0395_0708     FALSE 0.152 104.000 0.115 1.000 N NA
 6955558 6955559 VC0395_0709 VC0395_0710     FALSE 0.206 37.000 0.064 1.000   NA
 6955559 6955560 VC0395_0710 VC0395_0711     FALSE 0.166 37.000 0.038 NA   NA
 6955561 6955562 VC0395_0712 VC0395_0713 tyrP   FALSE 0.011 228.000 0.000 1.000 N NA
 6955564 6955565 VC0395_0715 VC0395_0716     TRUE 0.724 -3.000 0.055 NA   NA
 6955565 6955566 VC0395_0716 VC0395_0717     TRUE 0.990 4.000 0.909 1.000   NA
 6955566 6955567 VC0395_0717 VC0395_0718     TRUE 0.889 104.000 0.909 NA Y NA
 6955568 6955569 VC0395_0719 VC0395_0720   ugd FALSE 0.227 109.000 0.107 1.000   NA
 6955569 6955570 VC0395_0720 VC0395_0721 ugd   FALSE 0.362 164.000 0.400 NA   NA
 6955570 6955571 VC0395_0721 VC0395_0722     FALSE 0.101 79.000 0.011 NA   NA
 6955571 6955572 VC0395_0722 VC0395_0723     TRUE 0.990 -3.000 0.535 NA Y NA
 6955573 6955574 VC0395_0724 VC0395_0725     FALSE 0.092 90.000 0.037 NA   NA
 6955574 6955575 VC0395_0725 VC0395_0726     FALSE 0.331 169.000 0.385 NA   NA
 6955575 6955576 VC0395_0726 VC0395_0727     FALSE 0.166 126.000 0.092 NA   NA
 6955578 6955579 VC0395_0729 VC0395_0730     FALSE 0.027 174.000 0.050 NA   NA
 6955579 6955580 VC0395_0730 VC0395_0731   orfA TRUE 0.831 24.000 0.000 0.056   NA
 6955580 6955581 VC0395_0731 VC0395_0732 orfA orfB TRUE 0.983 -3.000 0.000 0.056 Y NA
 6955581 6955582 VC0395_0732 VC0395_0733 orfB   FALSE 0.109 157.000 0.000 NA   NA
 6955582 6955583 VC0395_0733 VC0395_0734     FALSE 0.003 861.000 0.000 NA   NA
 6955583 6955584 VC0395_0734 VC0395_0735     TRUE 0.903 2.000 0.000 NA   NA
 6955584 6955585 VC0395_0735 VC0395_0736     FALSE 0.229 117.000 0.000 NA   NA
 6955585 6955586 VC0395_0736 VC0395_0737     TRUE 0.771 14.000 0.000 NA   NA
 6955587 6955588 VC0395_0738 VC0395_0739 orfB orfA TRUE 0.983 -3.000 0.000 0.056 Y NA
 6955588 6955589 VC0395_0739 VC0395_0740 orfA   FALSE 0.002 519.000 0.000 NA N NA
 6955589 6955590 VC0395_0740 VC0395_0741     FALSE 0.002 184.000 0.033 NA N NA
 6955592 6955593 VC0395_0743 VC0395_0744     TRUE 0.816 57.000 0.750 NA   NA
 6955593 6955594 VC0395_0744 VC0395_0745     FALSE 0.005 465.000 0.000 NA   NA
 6955594 6955595 VC0395_0745 VC0395_0746     FALSE 0.301 61.000 0.000 NA   NA
 6955595 6955596 VC0395_0746 VC0395_0747     TRUE 0.841 -6.000 0.000 NA   NA
 6955596 6955597 VC0395_0747 VC0395_0748     FALSE 0.055 186.000 0.000 NA   NA
 6955597 6955598 VC0395_0748 VC0395_0749     TRUE 0.720 69.000 0.500 NA   NA
 6955598 6955599 VC0395_0749 VC0395_0750     FALSE 0.255 175.000 0.333 NA   NA
 6955599 6955600 VC0395_0750 VC0395_0751   tnpA FALSE 0.254 106.000 0.000 NA   NA
 6955600 6955601 VC0395_0751 VC0395_0752 tnpA   FALSE 0.352 44.000 0.000 NA   NA
 6955601 6955602 VC0395_0752 VC0395_0753     TRUE 0.741 61.000 0.500 NA   NA
 6955602 6955603 VC0395_0753 VC0395_0754     FALSE 0.259 91.000 0.000 NA   NA
 6955603 6955604 VC0395_0754 VC0395_0755     FALSE 0.256 97.000 0.000 NA   NA
 6955604 6955605 VC0395_0755 VC0395_0756     TRUE 0.951 -75.000 0.500 NA   NA
 6955605 6955606 VC0395_0756 VC0395_0757     TRUE 0.748 79.000 0.600 NA   NA
 6955606 6955607 VC0395_0757 VC0395_0758     TRUE 0.813 -12.000 0.000 NA   NA
 6955607 6955608 VC0395_0758 VC0395_0759     FALSE 0.040 202.000 0.000 NA   NA
 6955608 6955609 VC0395_0759 VC0395_0760     TRUE 0.851 -3.000 0.000 1.000   NA
 6955609 6955610 VC0395_0760 VC0395_0761     FALSE 0.284 67.000 0.000 NA   NA
 6955610 6955611 VC0395_0761 VC0395_0762     FALSE 0.155 141.000 0.000 NA   NA
 6955611 6955612 VC0395_0762 VC0395_0763     FALSE 0.125 152.000 0.000 NA   NA
 6955613 6955614 VC0395_0764 VC0395_0765     TRUE 0.851 -3.000 0.000 1.000   NA
 6955614 6955615 VC0395_0765 VC0395_0766     FALSE 0.013 297.000 0.000 NA   NA
 6955615 6955616 VC0395_0766 VC0395_0767     TRUE 0.767 80.000 0.667 NA   NA
 6955616 6955617 VC0395_0767 VC0395_0768     TRUE 0.806 101.000 1.000 NA   NA
 6955618 6955619 VC0395_0769 VC0395_0770     TRUE 0.623 21.000 0.000 NA   NA
 6955619 6955620 VC0395_0770 VC0395_0771     TRUE 0.707 17.000 0.000 NA   NA
 6955621 6955622 VC0395_0772 VC0395_0773     FALSE 0.006 386.000 0.000 NA   NA
 6955622 6955623 VC0395_0773 VC0395_0774     TRUE 0.991 7.000 1.000 NA   NA
 6955623 6955624 VC0395_0774 VC0395_0775     TRUE 0.978 -22.000 1.000 NA   NA
 6955624 6955625 VC0395_0775 VC0395_0776     TRUE 0.816 85.000 1.000 NA   NA
 6955625 6955626 VC0395_0776 VC0395_0777     TRUE 0.622 154.000 1.000 NA   NA
 6955626 6955627 VC0395_0777 VC0395_0778     TRUE 0.818 82.000 1.000 NA   NA
 6955627 6955628 VC0395_0778 VC0395_0779     FALSE 0.446 33.000 0.000 NA   NA
 6955628 6955629 VC0395_0779 VC0395_0780     TRUE 0.707 17.000 0.000 NA   NA
 6955629 6955630 VC0395_0780 VC0395_0781     TRUE 0.599 22.000 0.000 NA   NA
 6955630 6955631 VC0395_0781 VC0395_0782     FALSE 0.005 454.000 0.000 NA   NA
 6955631 6955632 VC0395_0782 VC0395_0783     TRUE 0.816 85.000 1.000 NA   NA
 6955632 6955633 VC0395_0783 VC0395_0784     TRUE 0.987 -3.000 1.000 NA   NA
 6955633 6955634 VC0395_0784 VC0395_0785     FALSE 0.011 305.000 0.000 NA   NA
 6955634 6955635 VC0395_0785 VC0395_0786     TRUE 0.841 60.000 1.000 NA   NA
 6955635 6955636 VC0395_0786 VC0395_0787     TRUE 0.983 12.000 1.000 NA   NA
 6955636 6955637 VC0395_0787 VC0395_0788     TRUE 0.990 0.000 1.000 NA   NA
 6955637 6955638 VC0395_0788 VC0395_0789     FALSE 0.012 304.000 0.000 NA   NA
 6955638 6955639 VC0395_0789 VC0395_0790     TRUE 0.987 -3.000 1.000 NA   NA
 6955639 6955640 VC0395_0790 VC0395_0791     TRUE 0.990 0.000 1.000 NA   NA
 6955641 6955642 VC0395_0792 VC0395_0793     FALSE 0.010 322.000 0.000 NA   NA
 6955642 6955643 VC0395_0793 VC0395_0794     FALSE 0.070 128.000 0.039 NA   NA
 6955643 6955644 VC0395_0794 VC0395_0795     TRUE 0.961 -13.000 0.185 NA Y NA
 6955644 6955645 VC0395_0795 VC0395_0796     FALSE 0.002 193.000 0.033 NA N NA
 6955645 6955646 VC0395_0796 VC0395_0797   doc FALSE 0.015 188.000 0.013 NA   NA
 6955646 6955647 VC0395_0797 VC0395_0798 doc   TRUE 0.629 0.000 0.013 1.000   NA
 6955647 6955648 VC0395_0798 VC0395_0799     FALSE 0.023 171.000 0.003 1.000   NA
 6955650 6955651 VC0395_0801 VC0395_0802     FALSE 0.025 168.000 0.020 NA   NA
 6955651 6955652 VC0395_0802 VC0395_0803     FALSE 0.037 137.000 0.020 1.000   NA
 6955652 6955653 VC0395_0803 VC0395_0804     TRUE 0.963 -13.000 0.600 NA N NA
 6955653 6955654 VC0395_0804 VC0395_0805     FALSE 0.003 1866.000 0.000 NA   NA
 6955654 6955655 VC0395_0805 VC0395_0806     TRUE 0.921 25.000 0.750 NA   NA
 6955655 6955656 VC0395_0806 VC0395_0807     TRUE 0.698 131.000 0.750 NA   NA
 6955656 6955657 VC0395_0807 VC0395_0808     TRUE 0.979 -18.000 1.000 NA   NA
 6955657 6955658 VC0395_0808 VC0395_0809     TRUE 0.964 9.000 0.250 NA   NA
 6955658 6955659 VC0395_0809 VC0395_0810     FALSE 0.362 147.000 0.250 NA   NA
 6955659 6955660 VC0395_0810 VC0395_0811     TRUE 0.624 147.000 0.750 NA   NA
 6955660 6955661 VC0395_0811 VC0395_0812     FALSE 0.010 323.000 0.000 NA   NA
 6955661 6955662 VC0395_0812 VC0395_0813     FALSE 0.012 304.000 0.000 NA   NA
 6955663 6955664 VC0395_0814 VC0395_0815 sbp   FALSE 0.007 383.000 0.000 NA   NA
 6955665 6955666 VC0395_0816 VC0395_0817     TRUE 0.605 156.000 1.000 NA   NA
 6955666 6955667 VC0395_0817 VC0395_0818     FALSE 0.436 138.000 0.286 NA   NA
 6955667 6955668 VC0395_0818 VC0395_0819     FALSE 0.363 151.000 0.286 NA   NA
 6955668 6955669 VC0395_0819 VC0395_0820     FALSE 0.036 208.000 0.000 NA   NA
 6955669 6955670 VC0395_0820 VC0395_0821     FALSE 0.016 271.000 0.000 NA   NA
 6955671 6955672 VC0395_0822 VC0395_0823     TRUE 0.958 -10.000 0.160 NA Y NA
 6955673 6955674 VC0395_0824 VC0395_0825 blc-4   TRUE 0.741 -88.000 0.000 NA   NA
 6955674 6955675 VC0395_0825 VC0395_0826     FALSE 0.301 61.000 0.000 NA   NA
 6955675 6955676 VC0395_0826 VC0395_0827     TRUE 0.631 135.000 0.600 NA   NA
 6955676 6955677 VC0395_0827 VC0395_0828     FALSE 0.523 120.000 0.286 NA   NA
 6955677 6955678 VC0395_0828 VC0395_0829   mccF-2 FALSE 0.125 152.000 0.000 NA   NA
 6955678 6955679 VC0395_0829 VC0395_0830 mccF-2   FALSE 0.051 188.000 0.000 NA   NA
 6955679 6955680 VC0395_0830 VC0395_0831     FALSE 0.006 385.000 0.000 NA   NA
 6955680 6955681 VC0395_0831 VC0395_0832     FALSE 0.323 194.000 0.750 NA   NA
 6955683 6955684 VC0395_0834 VC0395_0835     FALSE 0.518 154.000 0.600 NA   NA
 6955684 6955685 VC0395_0835 VC0395_0836     FALSE 0.430 174.000 0.750 NA   NA
 6955685 6955686 VC0395_0836 VC0395_0837     FALSE 0.005 443.000 0.000 NA   NA
 6955686 6955687 VC0395_0837 VC0395_0838     FALSE 0.238 114.000 0.000 NA   NA
 6955687 6955688 VC0395_0838 VC0395_0839     FALSE 0.509 27.000 0.000 NA   NA
 6955688 6955689 VC0395_0839 VC0395_0840     FALSE 0.003 775.000 0.000 NA   NA
 6955691 6955692 VC0395_0842 VC0395_0843     FALSE 0.301 61.000 0.000 NA   NA
 6955692 6955693 VC0395_0843 VC0395_0844     TRUE 0.666 19.000 0.000 NA   NA
 6955693 6955694 VC0395_0844 VC0395_0845     TRUE 0.777 -28.000 0.000 NA   NA
 6955694 6955695 VC0395_0845 VC0395_0846     FALSE 0.136 149.000 0.000 NA   NA
 6955695 6955696 VC0395_0846 VC0395_0847     FALSE 0.009 340.000 0.000 NA   NA
 6955696 6955697 VC0395_0847 VC0395_0848     FALSE 0.014 285.000 0.000 NA   NA
 6955697 6955698 VC0395_0848 VC0395_0849     FALSE 0.098 162.000 0.000 NA   NA
 6955698 6955699 VC0395_0849 VC0395_0850     TRUE 0.813 -12.000 0.000 NA   NA
 6955699 6955700 VC0395_0850 VC0395_0851     FALSE 0.020 250.000 0.000 NA   NA
 6955700 6955701 VC0395_0851 VC0395_0852     TRUE 0.758 -46.000 0.000 NA   NA
 6955701 6955702 VC0395_0852 VC0395_0853     FALSE 0.232 116.000 0.000 NA   NA
 6955702 6955703 VC0395_0853 VC0395_0854     FALSE 0.274 74.000 0.000 NA   NA
 6955703 6955704 VC0395_0854 VC0395_0855     FALSE 0.311 57.000 0.000 NA   NA
 6955704 6955705 VC0395_0855 VC0395_0856     FALSE 0.003 1180.000 0.000 NA   NA
 6955705 6955706 VC0395_0856 VC0395_0857     FALSE 0.036 208.000 0.000 NA   NA
 6955708 6955709 VC0395_0859 VC0395_0860     FALSE 0.177 135.000 0.000 NA   NA
 6955709 6955710 VC0395_0860 VC0395_0861     FALSE 0.104 159.000 0.000 NA   NA
 6955710 6955711 VC0395_0861 VC0395_0862     TRUE 0.977 -3.000 0.500 NA   NA
 6955711 6955712 VC0395_0862 VC0395_0863     FALSE 0.287 66.000 0.000 NA   NA
 6955712 6955713 VC0395_0863 VC0395_0864     TRUE 0.894 8.000 0.000 NA   NA
 6955713 6955714 VC0395_0864 VC0395_0865     FALSE 0.024 236.000 0.000 NA   NA
 6955714 6955715 VC0395_0865 VC0395_0866     TRUE 0.592 151.000 0.750 NA   NA
 6955715 6955716 VC0395_0866 VC0395_0867     FALSE 0.035 209.000 0.000 NA   NA
 6955716 6955717 VC0395_0867 VC0395_0868   blc-4 FALSE 0.012 303.000 0.000 NA   NA
 6955717 6955718 VC0395_0868 VC0395_0869 blc-4   FALSE 0.136 149.000 0.000 NA   NA
 6955718 6955719 VC0395_0869 VC0395_0870     TRUE 0.825 -9.000 0.000 NA   NA
 6955719 6955720 VC0395_0870 VC0395_0871     FALSE 0.277 70.000 0.000 NA   NA
 6955720 6955721 VC0395_0871 VC0395_0872     FALSE 0.033 158.000 0.014 NA   NA
 6955721 6955722 VC0395_0872 VC0395_0873     FALSE 0.182 134.000 0.000 NA   NA
 6955722 6955723 VC0395_0873 VC0395_0874     TRUE 0.565 131.000 0.400 NA   NA
 6955723 6955724 VC0395_0874 VC0395_0875     FALSE 0.003 1109.000 0.000 NA   NA
 6955724 6955725 VC0395_0875 VC0395_0876     FALSE 0.086 168.000 0.000 NA   NA
 6955725 6955726 VC0395_0876 VC0395_0877     TRUE 0.834 47.000 0.750 NA   NA
 6955726 6955727 VC0395_0877 VC0395_0878   blc-4 TRUE 0.617 148.000 0.750 NA   NA
 6955727 6955728 VC0395_0878 VC0395_0879 blc-4   FALSE 0.061 182.000 0.000 NA   NA
 6955728 6955729 VC0395_0879 VC0395_0880     FALSE 0.301 61.000 0.000 NA   NA
 6955729 6955730 VC0395_0880 VC0395_0881     TRUE 0.571 154.000 0.750 NA   NA
 6955730 6955731 VC0395_0881 VC0395_0882     TRUE 0.969 -40.000 0.750 NA   NA
 6955731 6955732 VC0395_0882 VC0395_0883     TRUE 0.758 67.000 0.600 NA   NA
 6955732 6955733 VC0395_0883 VC0395_0884     FALSE 0.005 446.000 0.000 NA   NA
 6955733 6955734 VC0395_0884 VC0395_0885     FALSE 0.301 61.000 0.000 NA   NA
 6955734 6955735 VC0395_0885 VC0395_0886   mccF-1 FALSE 0.111 57.000 0.031 NA   NA
 6955735 6955736 VC0395_0886 VC0395_0887 mccF-1   FALSE 0.120 154.000 0.000 NA   NA
 6955736 6955737 VC0395_0887 VC0395_0888     TRUE 0.840 41.000 0.667 NA   NA
 6955737 6955738 VC0395_0888 VC0395_0889     FALSE 0.244 112.000 0.000 NA   NA
 6955738 6955739 VC0395_0889 VC0395_0890     TRUE 0.769 -34.000 0.000 NA   NA
 6955739 6955740 VC0395_0890 VC0395_0891     FALSE 0.015 281.000 0.000 NA   NA
 6955740 6955741 VC0395_0891 VC0395_0892     FALSE 0.116 155.000 0.000 NA   NA
 6955741 6955742 VC0395_0892 VC0395_0893     FALSE 0.257 93.000 0.000 NA   NA
 6955742 6955743 VC0395_0893 VC0395_0894     FALSE 0.177 135.000 0.000 NA   NA
 6955743 6955744 VC0395_0894 VC0395_0895     FALSE 0.116 155.000 0.000 NA   NA
 6955744 6955745 VC0395_0895 VC0395_0896     FALSE 0.031 214.000 0.000 NA   NA
 6955745 6955746 VC0395_0896 VC0395_0897     FALSE 0.039 203.000 0.000 NA   NA
 6955746 6955747 VC0395_0897 VC0395_0898     FALSE 0.071 174.000 0.000 NA   NA
 6955748 6955749 VC0395_0899 VC0395_0900     TRUE 0.646 -13.000 0.058 NA   NA
 6955750 6955751 VC0395_0901 VC0395_0902     FALSE 0.057 184.000 0.000 NA   NA
 6955751 6955752 VC0395_0902 VC0395_0903     FALSE 0.008 356.000 0.000 NA   NA
 6955752 6955753 VC0395_0903 VC0395_0904     FALSE 0.063 180.000 0.000 NA   NA
 6955753 6955754 VC0395_0904 VC0395_0905     FALSE 0.152 114.000 0.074 NA   NA
 6955754 6955755 VC0395_0905 VC0395_0906     FALSE 0.083 149.000 0.074 NA   NA
 6955755 6955756 VC0395_0906 VC0395_0907     FALSE 0.253 107.000 0.000 NA   NA
 6955756 6955757 VC0395_0907 VC0395_0908     FALSE 0.301 61.000 0.000 NA   NA
 6955758 6955759 VC0395_0909 VC0395_0910     FALSE 0.006 420.000 0.000 NA   NA
 6955760 6955761 VC0395_0911 VC0395_0912     TRUE 0.953 -60.000 0.500 NA   NA
 6955761 6955762 VC0395_0912 VC0395_0913     FALSE 0.284 67.000 0.000 NA   NA
 6955762 6955763 VC0395_0913 VC0395_0914     FALSE 0.057 184.000 0.000 NA   NA
 6955764 6955765 VC0395_0915 VC0395_0916     TRUE 0.851 -3.000 0.000 1.000   NA
 6955766 6955767 VC0395_0917 VC0395_0918     FALSE 0.009 336.000 0.000 NA   NA
 6955767 6955768 VC0395_0918 VC0395_0919     FALSE 0.207 193.000 0.375 NA   NA
 6955768 6955769 VC0395_0919 VC0395_0920     FALSE 0.099 67.000 0.033 NA   NA
 6955769 6955770 VC0395_0920 VC0395_0921     FALSE 0.017 184.000 0.033 NA   NA
 6955770 6955771 VC0395_0921 VC0395_0922     FALSE 0.067 130.000 0.039 NA   NA
 6955771 6955772 VC0395_0922 VC0395_0923     FALSE 0.232 116.000 0.000 NA   NA
 6955772 6955773 VC0395_0923 VC0395_0924     TRUE 0.758 -46.000 0.000 NA   NA
 6955773 6955774 VC0395_0924 VC0395_0925     TRUE 0.790 61.000 0.667 NA   NA
 6955774 6955775 VC0395_0925 VC0395_0926     TRUE 0.602 57.000 0.250 NA   NA
 6955775 6955776 VC0395_0926 VC0395_0927     FALSE 0.038 205.000 0.000 NA   NA
 6955776 6955777 VC0395_0927 VC0395_0928     FALSE 0.256 100.000 0.000 NA   NA
 6955777 6955778 VC0395_0928 VC0395_0929     FALSE 0.007 372.000 0.000 NA   NA
 6955778 6955779 VC0395_0929 VC0395_0930     TRUE 0.858 11.000 0.000 NA   NA
 6955779 6955780 VC0395_0930 VC0395_0931     TRUE 0.780 -25.000 0.000 NA   NA
 6955780 6955781 VC0395_0931 VC0395_0932     FALSE 0.003 1354.000 0.000 NA   NA
 6955781 6955782 VC0395_0932 VC0395_0933     TRUE 0.985 -3.000 0.750 NA   NA
 6955782 6955783 VC0395_0933 VC0395_0934     TRUE 0.804 107.000 1.000 NA   NA
 6955783 6955784 VC0395_0934 VC0395_0935     FALSE 0.109 57.000 0.021 NA   NA
 6955785 6955786 VC0395_0936 VC0395_0937     TRUE 0.901 1.000 0.000 NA   NA
 6955786 6955787 VC0395_0937 VC0395_0938   intI4 FALSE 0.004 748.000 0.000 NA   NA
 6955788 6955789 VC0395_0939 VC0395_0940 rplT rpmI TRUE 0.974 42.000 0.928 0.014 Y NA
 6955789 6955790 VC0395_0940 VC0395_0941 rpmI infC TRUE 0.852 104.000 0.652 1.000 Y NA
 6955790 6955791 VC0395_0941 VC0395_0942 infC thrS FALSE 0.350 166.000 0.186 1.000 Y NA
 6955791 6955792 VC0395_0942 VC0395_0943 thrS   FALSE 0.016 269.000 0.000 NA   NA
 6955792 6955793 VC0395_0943 VC0395_0944     TRUE 0.987 2.000 0.600 NA   NA
 6955793 6955794 VC0395_0944 VC0395_0945     TRUE 0.985 0.000 0.600 NA   NA
 6955794 6955795 VC0395_0945 VC0395_0946     FALSE 0.004 521.000 0.000 NA   NA
 6955795 6955796 VC0395_0946 VC0395_0947     FALSE 0.015 276.000 0.000 NA   NA
 6955796 6955797 VC0395_0947 VC0395_0948     TRUE 0.874 46.000 0.400 0.053   NA
 6955797 6955798 VC0395_0948 VC0395_0949   gcvT FALSE 0.004 467.000 0.000 1.000   NA
 6955798 6955799 VC0395_0949 VC0395_0950 gcvT   FALSE 0.006 244.000 0.006 1.000   NA
 6955800 6955801 VC0395_0951 VC0395_0952   glyA-2 TRUE 0.766 -37.000 0.000 NA   NA
 6955801 6955802 VC0395_0952 VC0395_0953 glyA-2 gcvH TRUE 0.580 37.000 0.054 1.000 Y NA
 6955804 6955805 VC0395_0955 VC0395_0956 gcvP tnpA FALSE 0.027 180.000 0.000 1.000 N NA
 6955808 6955809 VC0395_0959 VC0395_0960   dacA-2 FALSE 0.078 178.000 0.125 1.000   NA
 6955809 6955810 VC0395_0960 VC0395_0961 dacA-2   FALSE 0.365 165.000 0.600 1.000 N NA
 6955810 6955811 VC0395_0961 VC0395_0962     TRUE 0.941 16.000 0.625 1.000 N NA
 6955811 6955812 VC0395_0962 VC0395_0963   emrD-3 FALSE 0.007 283.000 0.000 NA N NA
 6955815 6955816 VC0395_0966 VC0395_0967     TRUE 0.923 11.000 0.176 1.000   NA
 6955816 6955817 VC0395_0967 VC0395_0968     TRUE 0.611 106.000 0.333 NA   NA
 6955817 6955818 VC0395_0968 VC0395_0969     TRUE 0.604 110.000 0.333 NA   NA
 6955818 6955819 VC0395_0969 VC0395_0970     TRUE 0.882 24.000 0.429 NA   NA
 6955819 6955820 VC0395_0970 VC0395_0971     TRUE 0.833 -7.000 0.000 NA   NA
 6955820 6955821 VC0395_0971 VC0395_0972     TRUE 0.855 24.000 0.333 NA   NA
 6955821 6955822 VC0395_0972 VC0395_0973     TRUE 0.992 -3.000 0.800 1.000 Y NA
 6955822 6955823 VC0395_0973 VC0395_0974     TRUE 0.987 -3.000 1.000 NA   NA
 6955823 6955824 VC0395_0974 VC0395_0975     TRUE 0.590 89.000 0.300 NA   NA
 6955824 6955825 VC0395_0975 VC0395_0976     FALSE 0.501 172.000 1.000 NA   NA
 6955826 6955827 VC0395_0977 VC0395_0978     FALSE 0.183 77.000 0.077 NA   NA
 6955828 6955829 VC0395_0979 VC0395_0980 amy1   FALSE 0.151 173.000 0.250 1.000 N NA
 6955830 6955831 VC0395_0981 VC0395_0982     FALSE 0.456 127.000 0.262 1.000   NA
 6955832 6955833 VC0395_0983 VC0395_0984 sgaT   TRUE 0.647 98.000 0.098 0.007   NA
 6955833 6955834 VC0395_0984 VC0395_0985   araD TRUE 0.958 9.000 0.098 1.000 Y NA
 6955834 6955835 VC0395_0985 VC0395_0986 araD   TRUE 0.984 6.000 0.545 1.000   NA
 6955835 6955836 VC0395_0986 VC0395_0987   ulaD TRUE 0.968 6.000 0.273 1.000   NA
 6955836 6955837 VC0395_0987 VC0395_0988 ulaD   TRUE 0.987 12.000 0.600 1.000 Y NA
 6955837 6955838 VC0395_0988 VC0395_0989     TRUE 0.971 -40.000 0.800 NA   NA
 6955839 6955840 VC0395_0990 VC0395_0991     TRUE 0.980 -19.000 0.464 1.000 Y NA
 6955842 6955843 VC0395_0993 VC0395_0994   ackA-2 TRUE 0.571 81.000 0.267 NA   NA
 6955843 6955844 VC0395_0994 VC0395_0995 ackA-2   FALSE 0.016 270.000 0.000 NA   NA
 6955844 6955845 VC0395_0995 VC0395_0996     FALSE 0.145 58.000 0.052 NA   NA
 6955847 6955848 VC0395_0998 VC0395_0999 vctC vctG TRUE 0.995 3.000 0.870 1.000 Y NA
 6955848 6955849 VC0395_0999 VC0395_1000 vctG vctD TRUE 0.996 -10.000 0.870 0.046 Y NA
 6955849 6955850 VC0395_1000 VC0395_1001 vctD vctP TRUE 0.832 53.000 0.356 1.000 Y NA
 6955850 6955851 VC0395_1001 VC0395_1002 vctP   FALSE 0.009 316.000 0.000 1.000   NA
 6955852 6955853 VC0395_1003 VC0395_1004   prtV FALSE 0.483 85.000 0.200 NA   NA
 6955854 6955855 VC0395_1005 VC0395_1006   hlyC TRUE 0.981 10.000 0.587 1.000   NA
 6955855 6955856 VC0395_1006 VC0395_1007 hlyC hylB FALSE 0.015 267.000 0.000 1.000   NA
 6955856 6955857 VC0395_1007 VC0395_1008 hylB hlyA FALSE 0.011 299.000 0.000 1.000   NA
 6955857 6955858 VC0395_1008 VC0395_1009 hlyA   TRUE 0.925 -22.000 0.250 NA   NA
 6955859 6955860 VC0395_1010 VC0395_1011     FALSE 0.004 605.000 0.000 NA   NA
 6955860 6955861 VC0395_1011 VC0395_1013     FALSE 0.336 121.000 0.214 1.000 N NA
 6955863 6955864 VC0395_1014 VC0395_1015   emrD TRUE 0.911 1.000 0.114 NA   NA
 6955864 6955865 VC0395_1015 VC0395_1016 emrD   FALSE 0.003 395.000 0.000 NA N NA
 6955868 6955869 VC0395_1019 VC0395_1020     FALSE 0.001 240.000 0.005 1.000 N NA
 6955870 6955871 VC0395_1021 VC0395_1022 nadE   TRUE 0.696 9.000 0.013 NA   NA
 6955871 6955872 VC0395_1022 VC0395_1023   dcuB FALSE 0.096 111.000 0.044 NA   NA
 6955872 6955873 VC0395_1023 VC0395_1024 dcuB rhlE-2 FALSE 0.021 190.000 0.066 1.000   NA
 6955873 6955874 VC0395_1024 VC0395_1025 rhlE-2 tnpA FALSE 0.014 505.000 0.000 1.000 Y NA
 6955875 6955876 VC0395_1026 VC0395_1027     TRUE 0.860 -3.000 0.104 NA   NA
 6955876 6955877 VC0395_1027 VC0395_1028     TRUE 0.952 -7.000 0.292 NA   NA
 6955877 6955878 VC0395_1028 VC0395_1029     FALSE 0.442 124.000 0.222 NA   NA
 6955878 6955879 VC0395_1029 VC0395_1030     FALSE 0.009 324.000 0.000 1.000   NA
 6955880 6955881 VC0395_1031 VC0395_1033     FALSE 0.020 248.000 0.000 NA   NA
 6955882 6955883 VC0395_1032 VC0395_1034     TRUE 0.933 -3.000 0.176 NA   NA
 6955883 6955884 VC0395_1034 VC0395_1035     TRUE 0.968 -12.000 0.529 NA   NA
 6955884 6955885 VC0395_1035 VC0395_1036     TRUE 0.949 3.000 0.167 NA   NA
 6955885 6955886 VC0395_1036 VC0395_1037     TRUE 0.971 0.000 0.300 NA   NA
 6955886 6955887 VC0395_1037 VC0395_1038     TRUE 0.954 -3.000 0.242 NA   NA
 6955887 6955888 VC0395_1038 VC0395_1039     TRUE 0.984 -3.000 0.738 NA   NA
 6955888 6955889 VC0395_1039 VC0395_1040     TRUE 0.984 -3.000 0.738 NA   NA
 6955889 6955890 VC0395_1040 VC0395_1041     TRUE 0.974 -10.000 0.645 NA   NA
 6955890 6955891 VC0395_1041 VC0395_1042     TRUE 0.895 12.000 0.150 NA   NA
 6955891 6955892 VC0395_1042 VC0395_1043     FALSE 0.533 51.000 0.188 NA   NA
 6955892 6955893 VC0395_1043 VC0395_1044     TRUE 0.897 -3.000 0.125 NA   NA
 6955893 6955894 VC0395_1044 VC0395_1045     TRUE 0.822 71.000 1.000 NA   NA
 6955894 6955895 VC0395_1045 VC0395_1046     TRUE 0.941 20.000 0.667 NA   NA
 6955895 6955896 VC0395_1046 VC0395_1047     TRUE 0.979 -13.000 0.833 NA   NA
 6955896 6955897 VC0395_1047 VC0395_1048     TRUE 0.981 -3.000 0.600 NA   NA
 6955897 6955898 VC0395_1048 VC0395_1049     TRUE 0.698 15.000 0.094 NA   NA
 6955898 6955899 VC0395_1049 VC0395_1050     TRUE 0.990 0.000 0.939 NA   NA
 6955899 6955900 VC0395_1050 VC0395_1051     TRUE 0.990 2.000 0.848 NA   NA
 6955900 6955901 VC0395_1051 VC0395_1052     TRUE 0.986 -3.000 0.848 NA   NA
 6955901 6955902 VC0395_1052 VC0395_1053     TRUE 0.899 27.000 0.659 NA   NA
 6955902 6955903 VC0395_1053 VC0395_1054     TRUE 0.917 107.000 0.568 0.001   NA
 6955903 6955904 VC0395_1054 VC0395_1055     TRUE 0.981 4.000 0.414 1.000   NA
 6955904 6955905 VC0395_1055 VC0395_1056     TRUE 0.863 37.000 0.750 1.000   NA
 6955906 6955907 VC0395_1057 VC0395_1059     TRUE 0.971 -3.000 0.364 NA   NA
 6955909 6955910 VC0395_1060 VC0395_1061     TRUE 0.987 4.000 0.600 NA   NA
 6955910 6955911 VC0395_1061 VC0395_1062     FALSE 0.046 194.000 0.000 NA   NA
 6955914 6955915 VC0395_1065 VC0395_1066     TRUE 0.960 10.000 0.250 NA   NA
 6955915 6955916 VC0395_1066 VC0395_1067     TRUE 0.964 9.000 0.250 NA   NA
 6955918 6955919 VC0395_1069 VC0395_1070     TRUE 0.631 -3.000 0.005 1.000   NA
 6955919 6955920 VC0395_1070 VC0395_1071     FALSE 0.020 250.000 0.000 NA   NA
 6955920 6955921 VC0395_1071 VC0395_1072     TRUE 0.974 -3.000 0.429 NA   NA
 6955921 6955922 VC0395_1072 VC0395_1073     TRUE 0.795 82.000 0.800 NA   NA
 6955922 6955923 VC0395_1073 VC0395_1074     TRUE 0.960 13.000 0.455 NA   NA
 6955923 6955924 VC0395_1074 VC0395_1075     TRUE 0.544 111.000 0.273 NA   NA
 6955925 6955926 VC0395_1076 VC0395_1077     FALSE 0.269 26.000 0.057 1.000   NA
 6955926 6955927 VC0395_1077 VC0395_1078     TRUE 0.779 0.000 0.057 NA   NA
 6955927 6955928 VC0395_1078 VC0395_1079     TRUE 0.893 0.000 0.000 NA   NA
 6955930 6955931 VC0395_1081 VC0395_1082     TRUE 0.751 66.000 0.600 1.000   NA
 6955934 6955935 VC0395_1084 VC0395_1086     FALSE 0.118 38.000 0.013 1.000   NA
 6955935 6955936 VC0395_1086 VC0395_1087     TRUE 0.995 0.000 0.902 0.079   NA
 6955936 6955937 VC0395_1087 VC0395_1088     FALSE 0.258 87.000 0.105 NA   NA
 6955939 6955940 VC0395_1090 VC0395_1091     FALSE 0.006 388.000 0.000 NA   NA
 6955944 6955945 VC0395_1094 VC0395_1096   pepT FALSE 0.003 172.000 0.044 NA N NA
 6955948 6955949 VC0395_1099 VC0395_1100     FALSE 0.023 171.000 0.028 NA   NA
 6955950 6955951 VC0395_1101 VC0395_1102     TRUE 0.635 57.000 0.286 NA   NA
 6955952 6955953 VC0395_1103 VC0395_1104     TRUE 0.984 4.000 0.500 NA   NA
 6955953 6955954 VC0395_1104 VC0395_1105     TRUE 0.984 -3.000 0.738 NA   NA
 6955954 6955955 VC0395_1105 VC0395_1106     TRUE 0.956 -13.000 0.370 NA   NA
 6955955 6955956 VC0395_1106 VC0395_1107     TRUE 0.857 2.000 0.082 NA   NA
 6955956 6955957 VC0395_1107 VC0395_1108     TRUE 0.896 -6.000 0.143 NA   NA
 6955957 6955958 VC0395_1108 VC0395_1109     FALSE 0.087 89.000 0.026 NA   NA
 6955958 6955959 VC0395_1109 VC0395_1110     FALSE 0.320 54.000 0.000 NA   NA
 6955960 6955961 VC0395_1111 VC0395_1112 cspA   FALSE 0.009 246.000 0.000 1.000 N NA
 6955966 6955967 VC0395_1117 VC0395_1118 tnaA mtr TRUE 0.770 79.000 0.308 1.000 Y NA
 6955967 6955968 VC0395_1118 VC0395_1119 mtr   FALSE 0.122 196.000 0.312 1.000 N NA
 6955968 6955969 VC0395_1119 VC0395_1120     TRUE 0.672 72.000 0.385 NA   NA
 6955969 6955970 VC0395_1120 VC0395_1121     FALSE 0.083 147.000 0.068 NA   NA
 6955970 6955971 VC0395_1121 VC0395_1122     TRUE 0.994 0.000 0.123 0.001 Y NA
 6955971 6955972 VC0395_1122 VC0395_1123     TRUE 0.998 -3.000 0.896 0.001 Y NA
 6955972 6955973 VC0395_1123 VC0395_1124     TRUE 0.993 -3.000 0.810 1.000 Y NA
 6955973 6955974 VC0395_1124 VC0395_1125     TRUE 0.992 -40.000 0.644 0.063 Y NA
 6955974 6955975 VC0395_1125 VC0395_1126     TRUE 0.993 0.000 0.614 1.000 Y NA
 6955976 6955977 VC0395_1127 VC0395_1128   def-2 FALSE 0.322 150.000 0.071 0.012 N NA
 6955977 6955978 VC0395_1128 VC0395_1129 def-2   FALSE 0.263 148.000 0.179 NA   NA
 6955978 6955979 VC0395_1129 VC0395_1130     FALSE 0.018 372.000 0.200 NA   NA
 6955979 6955980 VC0395_1130 VC0395_1131     TRUE 0.879 -3.000 0.114 NA   NA
 6955980 6955981 VC0395_1131 VC0395_1132     TRUE 0.765 -39.000 0.000 NA   NA
 6955981 6955982 VC0395_1132 VC0395_1133     FALSE 0.071 174.000 0.000 NA   NA
 6955987 6954851 VC0395_1138 VC0395_0001   glpT FALSE 0.005 426.000 0.000 NA   NA
 6955989 6955990 VC0395_A0002 VC0395_A0003   mutY TRUE 0.790 14.000 0.150 NA N NA
 6955990 6955991 VC0395_A0003 VC0395_A0004 mutY   FALSE 0.376 21.000 0.003 NA   NA
 6955992 6955993 VC0395_A0005 VC0395_A0006 trmB   FALSE 0.007 207.000 0.026 1.000   NA
 6955994 6955995 VC0395_A0007 VC0395_A0008     TRUE 0.907 -6.000 0.218 1.000 N NA
 6955995 6955996 VC0395_A0008 VC0395_A0009     FALSE 0.124 70.000 0.050 NA   NA
 6955996 6955997 VC0395_A0009 VC0395_A0010     FALSE 0.235 46.000 0.076 NA   NA
 6955997 6955998 VC0395_A0010 VC0395_A0011     TRUE 0.841 0.000 0.081 NA   NA
 6955998 6955999 VC0395_A0011 VC0395_A0012   proC FALSE 0.359 54.000 0.117 NA   NA
 6955999 6956000 VC0395_A0012 VC0395_A0013 proC   FALSE 0.391 53.000 0.125 NA   NA
 6956001 6956002 VC0395_A0014 VC0395_A0015 pilT-1 pilU TRUE 0.990 15.000 0.436 0.016 Y NA
 6956002 6956003 VC0395_A0015 VC0395_A0016 pilU   FALSE 0.433 112.000 0.079 0.044 N NA
 6956003 6956004 VC0395_A0016 VC0395_A0017   tyrS-1 FALSE 0.013 85.000 0.025 1.000 N NA
 6956005 6956006 VC0395_A0018 VC0395_A0019     FALSE 0.487 81.000 0.263 NA N NA
 6956006 6956007 VC0395_A0019 VC0395_A0020   gshB TRUE 0.817 -3.000 0.120 NA N NA
 6956007 6956008 VC0395_A0020 VC0395_A0021 gshB   TRUE 0.875 14.000 0.173 NA   NA
 6956008 6956009 VC0395_A0021 VC0395_A0022   dns FALSE 0.336 139.000 0.201 NA   NA
 6956009 6956010 VC0395_A0022 VC0395_A0023 dns   FALSE 0.399 130.000 0.210 NA   NA
 6956010 6956011 VC0395_A0023 VC0395_A0024   metK FALSE 0.082 111.000 0.030 NA   NA
 6956011 6956012 VC0395_A0024 VC0395_A0025 metK   FALSE 0.027 173.000 0.006 NA   NA
 6956015 6956016 VC0395_A0028 VC0395_A0029 irgA epd FALSE 0.005 152.000 0.033 1.000 N NA
 6956016 6956017 VC0395_A0029 VC0395_A0030 epd pgk TRUE 0.692 134.000 0.070 0.006 Y NA
 6956017 6956018 VC0395_A0030 VC0395_A0031 pgk fbaA TRUE 0.545 156.000 0.056 0.006 Y NA
 6956018 6956019 VC0395_A0031 VC0395_A0032 fbaA   FALSE 0.006 296.000 0.000 NA N NA
 6956021 6956022 VC0395_A0034 VC0395_A0035 iciA   TRUE 0.622 80.000 0.319 NA   NA
 6956022 6956023 VC0395_A0035 VC0395_A0036     FALSE 0.009 333.000 0.000 NA   NA
 6956025 6956026 VC0395_A0038 VC0395_A0039   glmS TRUE 0.626 63.000 0.412 1.000 N NA
 6956027 6956028 VC0395_A0040 VC0395_A0041     FALSE 0.425 142.000 0.300 NA   NA
 6956028 6956029 VC0395_A0041 VC0395_A0042     TRUE 0.925 -31.000 0.273 NA   NA
 6956029 6956030 VC0395_A0042 VC0395_A0043     FALSE 0.005 469.000 0.000 NA   NA
 6956030 6956031 VC0395_A0043 VC0395_A0044   rpoD FALSE 0.149 145.000 0.000 NA   NA
 6956031 6956032 VC0395_A0044 VC0395_A0045 rpoD dnaG FALSE 0.488 99.000 0.299 1.000 N NA
 6956032 6956033 VC0395_A0045 VC0395_A0046 dnaG   TRUE 0.644 24.000 0.137 1.000   NA
 6956033 6956034 VC0395_A0046 VC0395_A0047   rpsU TRUE 0.869 30.000 0.173 0.022   NA
 6956034 6956035 VC0395_A0047 VC0395_A0048 rpsU   FALSE 0.242 28.000 0.008 NA   NA
 6956036 6956037 VC0395_A0049 VC0395_A0050 gcp   FALSE 0.028 154.000 0.012 1.000   NA
 6956039 6956040 VC0395_A0052 VC0395_A0053   folK-1 TRUE 0.989 -3.000 0.500 1.000 Y NA
 6956040 6956041 VC0395_A0053 VC0395_A0054 folK-1   TRUE 0.817 -3.000 0.125 1.000 N NA
 6956041 6956042 VC0395_A0054 VC0395_A0055   ftsB FALSE 0.012 109.000 0.013 1.000 N NA
 6956042 6956043 VC0395_A0055 VC0395_A0056 ftsB ispD TRUE 0.901 -3.000 0.185 1.000 N NA
 6956043 6956044 VC0395_A0056 VC0395_A0057 ispD ispF TRUE 0.987 -3.000 0.419 1.000 Y NA
 6956044 6956045 VC0395_A0057 VC0395_A0058 ispF truD TRUE 0.634 30.000 0.173 1.000   NA
 6956045 6956046 VC0395_A0058 VC0395_A0059 truD surE TRUE 0.904 -37.000 0.235 1.000   NA
 6956046 6956047 VC0395_A0059 VC0395_A0060 surE pcm TRUE 0.959 -7.000 0.353 1.000   NA
 6956047 6956048 VC0395_A0060 VC0395_A0061 pcm nlpD FALSE 0.225 0.000 0.037 1.000 N NA
 6956048 6956049 VC0395_A0061 VC0395_A0062 nlpD rpoS FALSE 0.164 74.000 0.115 1.000 N NA
 6956050 6956051 VC0395_A0063 VC0395_A0064 mutS cysM FALSE 0.007 268.000 0.000 1.000 N NA
 6956052 6956053 VC0395_A0065 VC0395_A0066 cysP cysT TRUE 0.896 77.000 0.479 0.001 N NA
 6956053 6956054 VC0395_A0066 VC0395_A0067 cysT cysW TRUE 0.992 12.000 0.583 0.001 N NA
 6956054 6956055 VC0395_A0067 VC0395_A0068 cysW cysA TRUE 0.972 -3.000 0.180 1.000 Y NA
 6956055 6956056 VC0395_A0068 VC0395_A0069 cysA   FALSE 0.025 167.000 0.024 NA   NA
 6956056 6956057 VC0395_A0069 VC0395_A0070   recA FALSE 0.125 134.000 0.082 NA   NA
 6956057 6956058 VC0395_A0070 VC0395_A0071 recA recX FALSE 0.463 133.000 0.296 1.000   NA
 6956058 6956059 VC0395_A0071 VC0395_A0072 recX alaS FALSE 0.044 173.000 0.085 1.000   NA
 6956059 6956060 VC0395_A0072 VC0395_A0073 alaS   FALSE 0.230 32.000 0.004 NA   NA
 6956060 6956061 VC0395_A0073 VC0395_A0074     FALSE 0.183 38.000 0.006 NA   NA
 6956061 6956062 VC0395_A0074 VC0395_A0075   csrA FALSE 0.035 92.000 0.079 1.000 N NA
 6956062 6956063 VC0395_A0075 VC0395_A0076 csrA   FALSE 0.061 182.000 0.000 NA   NA
 6956063 6956064 VC0395_A0076 VC0395_A0077     FALSE 0.437 34.000 0.000 NA   NA
 6956064 6956065 VC0395_A0077 VC0395_A0078     TRUE 0.579 23.000 0.000 NA   NA
 6956065 6956066 VC0395_A0078 VC0395_A0079     FALSE 0.284 67.000 0.000 NA   NA
 6956066 6956067 VC0395_A0079 VC0395_A0080     FALSE 0.315 56.000 0.000 NA   NA
 6956067 6956068 VC0395_A0080 VC0395_A0081     FALSE 0.275 73.000 0.000 NA   NA
 6956068 6956069 VC0395_A0081 VC0395_A0082     FALSE 0.315 56.000 0.000 NA   NA
 6956069 6956070 VC0395_A0082 VC0395_A0083     FALSE 0.275 72.000 0.000 NA   NA
 6956070 6956071 VC0395_A0083 VC0395_A0084     FALSE 0.007 367.000 0.000 NA   NA
 6956071 6956072 VC0395_A0084 VC0395_A0085   oadA-1 TRUE 0.986 29.000 0.810 0.002 Y NA
 6956072 6956073 VC0395_A0085 VC0395_A0086 oadA-1 oadB-1 TRUE 0.998 10.000 0.976 0.002 Y NA
 6956073 6956074 VC0395_A0086 VC0395_A0087 oadB-1   TRUE 0.784 60.000 0.286 1.000 Y NA
 6956074 6956075 VC0395_A0087 VC0395_A0088     TRUE 0.664 -6.000 0.051 NA   NA
 6956075 6956076 VC0395_A0088 VC0395_A0089     TRUE 0.858 7.000 0.086 NA   NA
 6956076 6956077 VC0395_A0089 VC0395_A0090   gshA FALSE 0.288 112.000 0.127 1.000   NA
 6956077 6956078 VC0395_A0090 VC0395_A0091 gshA luxS FALSE 0.079 49.000 0.087 1.000 N NA
 6956079 6956080 VC0395_A0092 VC0395_A0093     TRUE 0.644 83.000 0.349 NA   NA
 6956081 6956082 VC0395_A0094 VC0395_A0095 ffh rpsP FALSE 0.080 236.000 0.361 1.000 N NA
 6956082 6956083 VC0395_A0095 VC0395_A0096 rpsP rimM TRUE 0.968 28.000 0.342 0.014 Y NA
 6956083 6956084 VC0395_A0096 VC0395_A0097 rimM trmD TRUE 0.945 28.000 0.672 1.000 Y NA
 6956084 6956085 VC0395_A0097 VC0395_A0098 trmD rplS TRUE 0.895 42.000 0.567 1.000 Y NA
 6956086 6956087 VC0395_A0099 VC0395_A0100 degS htrA TRUE 0.702 177.000 0.310 0.003 Y NA
 6956087 6956088 VC0395_A0100 VC0395_A0101 htrA   FALSE 0.358 129.000 0.183 NA   NA
 6956089 6956090 VC0395_A0102 VC0395_A0103   rplM FALSE 0.011 224.000 0.002 NA   NA
 6956090 6956091 VC0395_A0103 VC0395_A0104 rplM rpsI TRUE 0.992 16.000 0.601 0.014 Y NA
 6956091 6956092 VC0395_A0104 VC0395_A0105 rpsI petA FALSE 0.000 328.000 0.006 1.000 N NA
 6956092 6956093 VC0395_A0105 VC0395_A0106 petA petB TRUE 0.996 0.000 0.233 0.001 Y NA
 6956093 6956094 VC0395_A0106 VC0395_A0107 petB petC TRUE 0.998 -3.000 0.630 0.001 Y NA
 6956094 6956095 VC0395_A0107 VC0395_A0108 petC sspA TRUE 0.571 100.000 0.370 NA N NA
 6956095 6956096 VC0395_A0108 VC0395_A0109 sspA sspB TRUE 0.989 0.000 0.831 NA   NA
 6956097 6956098 VC0395_A0110 VC0395_A0111     TRUE 0.987 3.000 0.613 NA   NA
 6956098 6956099 VC0395_A0111 VC0395_A0112     TRUE 0.931 4.000 0.187 1.000 N NA
 6956099 6956100 VC0395_A0112 VC0395_A0113     TRUE 0.897 -13.000 0.172 NA   NA
 6956102 6956103 VC0395_A0115 VC0395_A0116     TRUE 0.888 6.000 0.000 1.000   NA
 6956106 6956107 VC0395_A0119 VC0395_A0120     FALSE 0.000 384.000 0.026 1.000 N NA
 6956107 6956108 VC0395_A0120 VC0395_A0121     TRUE 0.994 6.000 0.688 1.000 Y NA
 6956109 6956110 VC0395_A0122 VC0395_A0123 panC panB TRUE 0.997 11.000 0.395 0.001 Y NA
 6956110 6956111 VC0395_A0123 VC0395_A0124 panB folK-2 TRUE 0.970 3.000 0.117 1.000 Y NA
 6956111 6956112 VC0395_A0124 VC0395_A0125 folK-2 pcnB TRUE 0.928 -3.000 0.234 1.000 N NA
 6956112 6956113 VC0395_A0125 VC0395_A0126 pcnB   TRUE 0.581 91.000 0.131 1.000 Y NA
 6956113 6956114 VC0395_A0126 VC0395_A0127   dksA FALSE 0.428 74.000 0.231 1.000 N NA
 6956114 6956115 VC0395_A0127 VC0395_A0128 dksA sfsA FALSE 0.321 125.000 0.151 NA   NA
 6956116 6956117 VC0395_A0129 VC0395_A0130   hrpB FALSE 0.088 99.000 0.015 NA   NA
 6956117 6956118 VC0395_A0130 VC0395_A0131 hrpB mrcB TRUE 0.874 -3.000 0.158 1.000 N NA
 6956118 6956119 VC0395_A0131 VC0395_A0132 mrcB   FALSE 0.070 237.000 0.000 1.000 Y NA
 6956119 6956120 VC0395_A0132 VC0395_A0133   acnB FALSE 0.007 265.000 0.000 1.000 N NA
 6956120 6956121 VC0395_A0133 VC0395_A0134 acnB   FALSE 0.065 155.000 0.068 NA   NA
 6956121 6956122 VC0395_A0134 VC0395_A0135   glnB-1 FALSE 0.197 151.000 0.145 NA   NA
 6956122 6956123 VC0395_A0135 VC0395_A0136 glnB-1   TRUE 0.897 16.000 0.339 1.000 N NA
 6956123 6956124 VC0395_A0136 VC0395_A0137     TRUE 0.783 96.000 0.130 0.057 Y NA
 6956124 6956125 VC0395_A0137 VC0395_A0138     TRUE 0.909 84.000 0.374 0.044 Y NA
 6956125 6956126 VC0395_A0138 VC0395_A0139     TRUE 0.986 0.000 0.303 0.044 N NA
 6956127 6956128 VC0395_A0140 VC0395_A0141     TRUE 0.866 123.000 0.266 0.015 Y NA
 6956128 6956129 VC0395_A0141 VC0395_A0142   chb-1 TRUE 0.933 119.000 0.654 0.015 Y NA
 6956129 6956130 VC0395_A0142 VC0395_A0143 chb-1   TRUE 0.984 -3.000 0.316 NA Y NA
 6956130 6956131 VC0395_A0143 VC0395_A0144     TRUE 0.966 -3.000 0.316 NA   NA
 6956131 6956132 VC0395_A0144 VC0395_A0145     TRUE 0.699 57.000 0.395 1.000   NA
 6956132 6956133 VC0395_A0145 VC0395_A0146     TRUE 0.975 43.000 0.739 0.002 Y NA
 6956133 6956134 VC0395_A0146 VC0395_A0147     TRUE 0.995 3.000 0.895 1.000 Y NA
 6956134 6956135 VC0395_A0147 VC0395_A0148     TRUE 0.998 3.000 0.818 0.044 Y NA
 6956135 6956136 VC0395_A0148 VC0395_A0149     TRUE 0.800 170.000 0.727 0.044 Y NA
 6956136 6956137 VC0395_A0149 VC0395_A0150     FALSE 0.001 911.000 0.000 1.000 N NA
 6956137 6956138 VC0395_A0150 VC0395_A0151     FALSE 0.014 64.000 0.021 1.000 N NA
 6956138 6956139 VC0395_A0151 VC0395_A0152     FALSE 0.174 73.000 0.071 NA   NA
 6956142 6956143 VC0395_A0155 VC0395_A0156     FALSE 0.087 120.000 0.007 NA   NA
 6956143 6956144 VC0395_A0156 VC0395_A0157     FALSE 0.087 98.000 0.017 NA   NA
 6956144 6956145 VC0395_A0157 VC0395_A0158     TRUE 0.936 11.000 0.250 NA N NA
 6956148 6956149 VC0395_A0161 VC0395_A0162 dacB ompU FALSE 0.403 80.000 0.025 1.000 Y NA
 6956152 6956153 VC0395_A0165 VC0395_A0166 rrmJ ftsH FALSE 0.280 101.000 0.152 NA N NA
 6956153 6956154 VC0395_A0166 VC0395_A0167 ftsH folP TRUE 0.550 67.000 0.325 1.000 N NA
 6956154 6956155 VC0395_A0167 VC0395_A0168 folP glmM TRUE 0.719 26.000 0.260 1.000 N NA
 6956155 6956156 VC0395_A0168 VC0395_A0169 glmM secG FALSE 0.001 257.000 0.016 1.000 N NA
 6956156 6956157 VC0395_A0169 VC0395_A0170 secG   TRUE 0.894 8.000 0.000 NA   NA
 6956157 6956158 VC0395_A0170 VC0395_A0171     FALSE 0.320 54.000 0.000 NA   NA
 6956158 6956159 VC0395_A0171 VC0395_A0172     FALSE 0.034 210.000 0.000 NA   NA
 6956159 6956160 VC0395_A0172 VC0395_A0173   nusA TRUE 0.953 19.000 0.759 NA   NA
 6956160 6956161 VC0395_A0173 VC0395_A0174 nusA infB TRUE 0.798 25.000 0.342 1.000 N NA
 6956161 6956162 VC0395_A0174 VC0395_A0175 infB rbfA TRUE 0.831 90.000 0.530 1.000 Y NA
 6956162 6956163 VC0395_A0175 VC0395_A0176 rbfA truB TRUE 0.987 0.000 0.318 1.000 Y NA
 6956163 6956164 VC0395_A0176 VC0395_A0177 truB rpsO FALSE 0.534 142.000 0.211 1.000 Y NA
 6956164 6956165 VC0395_A0177 VC0395_A0178 rpsO pnp FALSE 0.069 363.000 0.335 1.000 Y NA
 6956165 6956166 VC0395_A0178 VC0395_A0179 pnp   FALSE 0.121 116.000 0.071 1.000   NA
 6956166 6956167 VC0395_A0179 VC0395_A0180     FALSE 0.175 87.000 0.087 1.000   NA
 6956167 6956168 VC0395_A0180 VC0395_A0181   vmrA FALSE 0.486 43.000 0.206 1.000 N NA
 6956169 6956170 VC0395_A0182 VC0395_A0183     TRUE 0.997 12.000 0.948 0.004 Y NA
 6956170 6956171 VC0395_A0183 VC0395_A0184     FALSE 0.138 108.000 0.112 1.000 N NA
 6956172 6956173 VC0395_A0185 VC0395_A0186     TRUE 0.938 -16.000 0.295 1.000   NA
 6956173 6956174 VC0395_A0186 VC0395_A0187   holD FALSE 0.303 111.000 0.132 1.000   NA
 6956174 6956175 VC0395_A0187 VC0395_A0189 holD rimI TRUE 0.786 -39.000 0.121 1.000   NA
 6956178 6956179 VC0395_A0191 VC0395_A0192 srmB   TRUE 0.843 88.000 0.333 0.013   NA
 6956180 6956181 VC0395_A0193 VC0395_A0194 brnQ prfB FALSE 0.003 369.000 0.000 1.000 N NA
 6956181 6956182 VC0395_A0194 VC0395_A0195 prfB lysS TRUE 0.940 25.000 0.162 0.044 Y NA
 6956182 6956183 VC0395_A0195 VC0395_A0196 lysS   FALSE 0.006 274.000 0.000 1.000 N NA
 6956183 6956184 VC0395_A0196 VC0395_A0197     FALSE 0.407 137.000 0.250 NA   NA
 6956184 6956185 VC0395_A0197 VC0395_A0198     FALSE 0.020 250.000 0.000 NA   NA
 6956186 6956187 VC0395_A0199 VC0395_A0200   mutH FALSE 0.002 193.000 0.015 1.000 N NA
 6956187 6956188 VC0395_A0200 VC0395_A0201 mutH   FALSE 0.296 22.000 0.034 NA   NA
 6956189 6956190 VC0395_A0202 VC0395_A0203     FALSE 0.497 -40.000 0.010 NA   NA
 6956190 6956191 VC0395_A0203 VC0395_A0204   ptsP FALSE 0.249 3.000 0.007 1.000 N NA
 6956191 6956192 VC0395_A0204 VC0395_A0205 ptsP   TRUE 0.953 10.000 0.231 1.000   NA
 6956192 6956193 VC0395_A0205 VC0395_A0206   lgt FALSE 0.164 29.000 0.038 1.000   NA
 6956193 6956194 VC0395_A0206 VC0395_A0207 lgt thyA TRUE 0.891 10.000 0.164 1.000 N NA
 6956196 6956197 VC0395_A0209 VC0395_A0210 nhaR hlyU FALSE 0.218 267.000 0.210 0.050 Y NA
 6956199 6956200 VC0395_A0212 VC0395_A0213 mviN ribF FALSE 0.418 69.000 0.169 1.000   NA
 6956200 6956201 VC0395_A0213 VC0395_A0214 ribF ileS TRUE 0.664 31.000 0.254 1.000 N NA
 6956201 6956202 VC0395_A0214 VC0395_A0215 ileS lspA TRUE 0.714 16.000 0.147 1.000 N NA
 6956202 6956203 VC0395_A0215 VC0395_A0216 lspA fkpB FALSE 0.299 163.000 0.417 1.000 N NA
 6956203 6956204 VC0395_A0216 VC0395_A0217 fkpB ispH TRUE 0.817 35.000 0.626 1.000 N NA
 6956206 6956207 VC0395_A0219 VC0395_A0220     FALSE 0.360 19.000 0.034 NA   NA
 6956208 6956209 VC0395_A0221 VC0395_A0222   anmK FALSE 0.402 18.000 0.041 NA   NA
 6956211 6956212 VC0395_A0224 VC0395_A0225     TRUE 0.998 10.000 0.877 0.025 Y NA
 6956213 6956214 VC0395_A0226 VC0395_A0227 aroF tyrA TRUE 0.883 13.000 0.045 1.000 Y NA
 6956215 6956216 VC0395_A0228 VC0395_A0229     FALSE 0.024 171.000 0.033 NA   NA
 6956217 6956218 VC0395_A0230 VC0395_A0231 slt   TRUE 0.894 10.000 0.167 1.000 N NA
 6956219 6956220 VC0395_A0232 VC0395_A0233     FALSE 0.477 -52.000 0.039 NA   NA
 6956220 6956221 VC0395_A0233 VC0395_A0234     TRUE 0.956 -16.000 0.571 1.000 N NA
 6956221 6956222 VC0395_A0234 VC0395_A0235   pheA FALSE 0.254 143.000 0.044 1.000 Y NA
 6956222 6956223 VC0395_A0235 VC0395_A0236 pheA   FALSE 0.001 240.000 0.015 NA N NA
 6956223 6956224 VC0395_A0236 VC0395_A0237     FALSE 0.002 401.000 0.004 NA   NA
 6956225 6956226 VC0395_A0238 VC0395_A0239 rluD   TRUE 0.950 3.000 0.168 NA   NA
 6956226 6956227 VC0395_A0239 VC0395_A0240   clpB-1 FALSE 0.212 125.000 0.108 NA   NA
 6956227 6956228 VC0395_A0240 VC0395_A0241 clpB-1 rrsA FALSE 0.004 508.000 0.000 NA   NA
 6956228 6956229 VC0395_A0241 VC0395_A0242 rrsA   FALSE 0.279 69.000 0.000 NA   NA
 6956229 6956230 VC0395_A0242 VC0395_A0245   rrlA FALSE 0.014 286.000 0.000 NA   NA
 6956230 6956231 VC0395_A0245 VC0395_A0246 rrlA rrfA FALSE 0.199 129.000 0.000 NA   NA
 6956231 6956232 VC0395_A0246 VC0395_A0247 rrfA   TRUE 0.562 24.000 0.000 NA   NA
 6956232 6956233 VC0395_A0247 VC0395_A0248     FALSE 0.046 194.000 0.000 NA   NA
 6956233 6956234 VC0395_A0248 VC0395_A0249   frp TRUE 0.917 10.000 0.136 NA   NA
 6956235 6956236 VC0395_A0250 VC0395_A0251     TRUE 0.880 3.000 0.093 NA   NA
 6956236 6956237 VC0395_A0251 VC0395_A0252   rdgC FALSE 0.005 151.000 0.025 1.000 N NA
 6956238 6956239 VC0395_A0253 VC0395_A0254 phoB phoR TRUE 0.976 22.000 0.453 0.076 Y NA
 6956239 6956240 VC0395_A0254 VC0395_A0255 phoR   TRUE 0.884 -3.000 0.168 1.000 N NA
 6956241 6956242 VC0395_A0256 VC0395_A0257 ppx ppk TRUE 0.980 -19.000 0.486 1.000 Y NA
 6956243 6956244 VC0395_A0258 VC0395_A0259 pstC-1 pstA-1 TRUE 0.978 10.000 0.489 1.000   NA
 6956244 6956245 VC0395_A0259 VC0395_A0260 pstA-1 pstB-1 TRUE 0.998 3.000 0.511 0.002 Y NA
 6956245 6956246 VC0395_A0260 VC0395_A0261 pstB-1 phoU TRUE 0.886 34.000 0.330 NA Y NA
 6956247 6956248 VC0395_A0262 VC0395_A0263   cutC FALSE 0.007 203.000 0.024 1.000   NA
 6956248 6956249 VC0395_A0263 VC0395_A0264 cutC   FALSE 0.004 335.000 0.000 1.000 N NA
 6956250 6956251 VC0395_A0265 VC0395_A0266   aceB FALSE 0.002 551.000 0.000 1.000 N NA
 6956251 6956252 VC0395_A0266 VC0395_A0267 aceB aceA FALSE 0.485 130.000 0.129 1.000 Y NA
 6956254 6956255 VC0395_A0269 VC0395_A0270 queA tgt TRUE 0.558 229.000 0.360 0.001 Y NA
 6956255 6956256 VC0395_A0270 VC0395_A0271 tgt yajC FALSE 0.529 105.000 0.325 NA N NA
 6956256 6956257 VC0395_A0271 VC0395_A0272 yajC secD TRUE 0.746 22.000 0.018 NA Y NA
 6956257 6956258 VC0395_A0272 VC0395_A0273 secD secF TRUE 0.974 15.000 0.080 0.002 Y NA
 6956260 6956261 VC0395_A0275 VC0395_A0276     FALSE 0.210 70.000 0.126 1.000 N NA
 6956261 6956262 VC0395_A0276 VC0395_A0277     TRUE 0.809 27.000 0.424 1.000 N NA
 6956262 6956263 VC0395_A0277 VC0395_A0278     TRUE 0.744 37.000 0.448 1.000 N NA
 6956263 6956264 VC0395_A0278 VC0395_A0279     TRUE 0.899 61.000 0.359 0.002   NA
 6956264 6956265 VC0395_A0279 VC0395_A0280   hscB TRUE 0.758 49.000 0.500 1.000   NA
 6956265 6956266 VC0395_A0280 VC0395_A0281 hscB hscA TRUE 0.955 24.000 0.634 1.000 Y NA
 6956266 6956267 VC0395_A0281 VC0395_A0282 hscA   TRUE 0.962 14.000 0.794 1.000 N NA
 6956267 6956268 VC0395_A0282 VC0395_A0283     TRUE 0.796 49.000 0.625 1.000   NA
 6956268 6956269 VC0395_A0283 VC0395_A0284   pepB FALSE 0.122 175.000 0.171 1.000   NA
 6956269 6956270 VC0395_A0284 VC0395_A0285 pepB ndk FALSE 0.001 204.000 0.017 1.000 N NA
 6956270 6956271 VC0395_A0285 VC0395_A0286 ndk   FALSE 0.114 174.000 0.156 1.000   NA
 6956271 6956272 VC0395_A0286 VC0395_A0287     FALSE 0.006 215.000 0.020 1.000   NA
 6956272 6956273 VC0395_A0287 VC0395_A0288   ispG TRUE 0.963 5.000 0.233 1.000   NA
 6956273 6956274 VC0395_A0288 VC0395_A0289 ispG hisS TRUE 0.652 26.000 0.207 1.000 N NA
 6956274 6956275 VC0395_A0289 VC0395_A0290 hisS   TRUE 0.686 37.000 0.259 1.000   NA
 6956275 6956276 VC0395_A0290 VC0395_A0291     TRUE 0.960 13.000 0.492 1.000   NA
 6956276 6956277 VC0395_A0291 VC0395_A0292   engA FALSE 0.107 193.000 0.203 1.000   NA
 6956277 6956278 VC0395_A0292 VC0395_A0293 engA   FALSE 0.315 21.000 0.016 NA   NA
 6956278 6956279 VC0395_A0293 VC0395_A0295     FALSE 0.011 305.000 0.000 NA   NA
 6956281 6956282 VC0395_A0296 VC0395_A0297 guaB guaA TRUE 0.902 107.000 0.190 0.001 Y NA
 6956282 6956283 VC0395_A0297 VC0395_A0298 guaA   FALSE 0.021 236.000 0.000 1.000   NA
 6956283 6956284 VC0395_A0298 VC0395_A0299     FALSE 0.077 191.000 0.143 NA   NA
 6956284 6956285 VC0395_A0299 VC0395_A0300   vibB FALSE 0.011 312.000 0.000 NA   NA
 6956286 6956287 VC0395_A0301 VC0395_A0302 vibE vibC TRUE 0.979 11.000 0.255 1.000 Y NA
 6956290 6956291 VC0395_A0305 VC0395_A0306 viuP viuD TRUE 0.992 -3.000 0.739 1.000 Y NA
 6956291 6956292 VC0395_A0306 VC0395_A0307 viuD viuG TRUE 0.991 -21.000 0.447 0.043 Y NA
 6956292 6956293 VC0395_A0307 VC0395_A0308 viuG viuC TRUE 0.602 117.000 0.173 1.000 Y NA
 6956293 6956294 VC0395_A0308 VC0395_A0309 viuC vibD TRUE 0.607 -69.000 0.115 1.000 N NA
 6956294 6956295 VC0395_A0309 VC0395_A0310 vibD   TRUE 0.946 10.000 0.269 1.000 N NA
 6956295 6956296 VC0395_A0310 VC0395_A0311     FALSE 0.012 218.000 0.000 1.000 N NA
 6956297 6956298 VC0395_A0312 VC0395_A0313   dadA FALSE 0.021 378.000 0.000 1.000 Y NA
 6956299 6956300 VC0395_A0314 VC0395_A0315     FALSE 0.049 125.000 0.079 NA N NA
 6956300 6956301 VC0395_A0315 VC0395_A0316     FALSE 0.045 166.000 0.063 NA   NA
 6956302 6956303 VC0395_A0317 VC0395_A0318 citB citA TRUE 0.987 14.000 1.000 1.000 Y NA
 6956303 6956304 VC0395_A0318 VC0395_A0319 citA oadB-2 FALSE 0.293 71.000 0.159 1.000 N NA
 6956304 6956305 VC0395_A0319 VC0395_A0320 oadB-2 oadA-2 TRUE 0.995 16.000 0.886 0.002 Y NA
 6956305 6956306 VC0395_A0320 VC0395_A0321 oadA-2   TRUE 0.998 1.000 0.720 0.002 Y NA
 6956306 6956307 VC0395_A0321 VC0395_A0322   citS TRUE 0.798 29.000 0.140 1.000 Y NA
 6956308 6956309 VC0395_A0323 VC0395_A0324 citC citD TRUE 0.650 52.000 0.128 1.000 Y NA
 6956309 6956310 VC0395_A0324 VC0395_A0325 citD citE TRUE 0.994 -3.000 0.537 0.001 N NA
 6956310 6956311 VC0395_A0325 VC0395_A0326 citE citF TRUE 0.949 -64.000 0.104 0.001 N NA
 6956311 6956312 VC0395_A0326 VC0395_A0327 citF citX TRUE 0.725 -3.000 0.108 1.000 N NA
 6956312 6956313 VC0395_A0327 VC0395_A0328 citX citG TRUE 0.833 59.000 0.400 1.000 Y NA
 6956313 6956314 VC0395_A0328 VC0395_A0329 citG   FALSE 0.008 347.000 0.000 NA   NA
 6956314 6956315 VC0395_A0329 VC0395_A0330     FALSE 0.099 75.000 0.013 NA   NA
 6956319 6956320 VC0395_A0334 VC0395_A0335     FALSE 0.274 192.000 0.571 NA   NA
 6956321 6956322 VC0395_A0336 VC0395_A0337     FALSE 0.240 70.000 0.097 NA   NA
 6956322 6956323 VC0395_A0337 VC0395_A0338     TRUE 0.857 1.000 0.093 1.000   NA
 6956323 6956324 VC0395_A0338 VC0395_A0339     FALSE 0.005 428.000 0.000 1.000   NA
 6956324 6956325 VC0395_A0339 VC0395_A0340     TRUE 0.921 -15.000 0.219 NA   NA
 6956327 6956328 VC0395_A0342 VC0395_A0343     FALSE 0.010 322.000 0.000 NA   NA
 6956328 6956329 VC0395_A0343 VC0395_A0344   aldA-1 FALSE 0.009 342.000 0.000 NA   NA
 6956330 6956331 VC0395_A0345 VC0395_A0346 tagA   FALSE 0.241 113.000 0.000 NA   NA
 6956331 6956332 VC0395_A0346 VC0395_A0347     TRUE 0.905 3.000 0.000 NA   NA
 6956332 6956333 VC0395_A0347 VC0395_A0348     TRUE 0.645 -3.000 0.015 NA   NA
 6956333 6956334 VC0395_A0348 VC0395_A0349   tpx FALSE 0.101 110.000 0.007 NA   NA
 6956336 6956337 VC0395_A0351 VC0395_A0352 tcpP tcpH TRUE 0.970 -15.000 0.600 NA   NA
 6956337 6956338 VC0395_A0352 VC0395_A0353 tcpH tcpA FALSE 0.004 547.000 0.000 NA   NA
 6956338 6956339 VC0395_A0353 VC0395_A0354 tcpA tcpB TRUE 0.747 81.000 0.600 NA   NA
 6956339 6956340 VC0395_A0354 VC0395_A0355 tcpB tcpQ TRUE 0.982 0.000 0.500 NA   NA
 6956340 6956341 VC0395_A0355 VC0395_A0356 tcpQ tcpC TRUE 0.986 3.000 0.583 NA   NA
 6956341 6956342 VC0395_A0356 VC0395_A0357 tcpC tcpR TRUE 0.958 -7.000 0.333 NA   NA
 6956342 6956343 VC0395_A0357 VC0395_A0358 tcpR tcpD TRUE 0.972 -12.000 0.600 NA   NA
 6956343 6956344 VC0395_A0358 VC0395_A0359 tcpD tcpS TRUE 0.965 16.000 0.800 NA   NA
 6956344 6956345 VC0395_A0359 VC0395_A0360 tcpS tcpT TRUE 0.958 -10.000 0.364 NA   NA
 6956345 6956346 VC0395_A0360 VC0395_A0361 tcpT tcpE TRUE 0.983 -25.000 0.636 1.000 Y NA
 6956346 6956347 VC0395_A0361 VC0395_A0362 tcpE tcpF TRUE 0.974 10.000 0.375 NA   NA
 6956347 6956348 VC0395_A0362 VC0395_A0363 tcpF tcpN/toxT FALSE 0.037 207.000 0.000 NA   NA
 6956348 6956349 VC0395_A0363 VC0395_A0364 tcpN/toxT tcpJ TRUE 0.964 0.000 0.333 1.000 N NA
 6956349 6956350 VC0395_A0364 VC0395_A0365 tcpJ acfB TRUE 0.988 7.000 0.333 1.000 Y NA
 6956350 6956351 VC0395_A0365 VC0395_A0366 acfB acfC TRUE 0.991 6.000 1.000 NA   NA
 6956351 6956352 VC0395_A0366 VC0395_A0367 acfC tagE-1 FALSE 0.004 498.000 0.000 NA   NA
 6956354 6956355 VC0395_A0369 VC0395_A0370     TRUE 0.769 -34.000 0.000 NA   NA
 6956356 6956357 VC0395_A0371 VC0395_A0372     FALSE 0.004 720.000 0.000 NA   NA
 6956357 6956358 VC0395_A0372 VC0395_A0373   ssrA FALSE 0.088 167.000 0.000 NA   NA
 6956358 6956359 VC0395_A0373 VC0395_A0374 ssrA smpB FALSE 0.279 69.000 0.000 NA   NA
 6956360 6956361 VC0395_A0375 VC0395_A0376     TRUE 0.896 -3.000 0.124 NA   NA
 6956362 6956363 VC0395_A0377 VC0395_A0378 smpA recN FALSE 0.012 108.000 0.049 1.000 N NA
 6956363 6956364 VC0395_A0378 VC0395_A0379 recN ppnK FALSE 0.225 130.000 0.170 1.000 N NA
 6956367 6956368 VC0395_A0382 VC0395_A0383 dnaK dnaJ FALSE 0.527 201.000 0.236 0.003 Y NA
 6956370 6956371 VC0395_A0385 VC0395_A0386     TRUE 0.984 -31.000 0.652 NA Y NA
 6956371 6956372 VC0395_A0386 VC0395_A0387     TRUE 0.981 -9.000 0.824 NA   NA
 6956372 6956373 VC0395_A0387 VC0395_A0388     TRUE 0.962 -10.000 0.410 NA   NA
 6956373 6956374 VC0395_A0388 VC0395_A0389     FALSE 0.003 433.000 0.000 NA N NA
 6956374 6956375 VC0395_A0389 VC0395_A0390   yfhC FALSE 0.013 69.000 0.025 NA N NA
 6956376 6956377 VC0395_A0391 VC0395_A0392     FALSE 0.018 179.000 0.026 NA   NA
 6956377 6956378 VC0395_A0392 VC0395_A0393     TRUE 0.691 0.000 0.026 NA   NA
 6956379 6956380 VC0395_A0394 VC0395_A0395   purL TRUE 0.636 -3.000 0.021 NA   NA
 6956380 6956381 VC0395_A0395 VC0395_A0396 purL tnpA FALSE 0.029 175.000 0.000 1.000 N NA
 6956382 6956383 VC0395_A0397 VC0395_A0398     TRUE 0.981 6.000 0.421 NA   NA
 6956383 6956384 VC0395_A0398 VC0395_A0399     FALSE 0.234 103.000 0.101 NA   NA
 6956384 6956385 VC0395_A0399 VC0395_A0400   proS FALSE 0.007 242.000 0.008 NA   NA
 6956385 6956386 VC0395_A0400 VC0395_A0401 proS   FALSE 0.010 226.000 0.048 NA   NA
 6956387 6956388 VC0395_A0402 VC0395_A0403 rpmE2 rpmJ TRUE 0.967 -3.000 0.083 0.013   NA
 6956388 6956389 VC0395_A0403 VC0395_A0404 rpmJ   FALSE 0.018 183.000 0.014 NA   NA
 6956390 6956391 VC0395_A0405 VC0395_A0406     TRUE 0.636 -3.000 0.027 NA   NA
 6956393 6956394 VC0395_A0407 VC0395_A0409     TRUE 0.981 4.000 0.402 NA   NA
 6956395 6956396 VC0395_A0410 VC0395_A0411     TRUE 0.984 1.000 0.518 NA   NA
 6956397 6956398 VC0395_A0412 VC0395_A0413 dxs ispA TRUE 0.930 20.000 0.246 1.000 Y NA
 6956398 6956399 VC0395_A0413 VC0395_A0414 ispA xseB FALSE 0.429 42.000 0.177 1.000 N NA
 6956400 6956401 VC0395_A0415 VC0395_A0416 pomA motB TRUE 0.986 12.000 0.566 1.000 Y NA
 6956401 6956402 VC0395_A0416 VC0395_A0417 motB thiI FALSE 0.001 208.000 0.029 1.000 N NA
 6956402 6956403 VC0395_A0417 VC0395_A0418 thiI   FALSE 0.002 622.000 0.000 1.000 N NA
 6956403 6956404 VC0395_A0418 VC0395_A0419     FALSE 0.488 22.000 0.081 NA   NA
 6956405 6956406 VC0395_A0420 VC0395_A0421 xni   TRUE 0.579 39.000 0.178 NA   NA
 6956406 6956407 VC0395_A0421 VC0395_A0422     FALSE 0.025 205.000 0.082 NA   NA
 6956407 6956408 VC0395_A0422 VC0395_A0423     TRUE 0.866 102.000 0.450 0.013   NA
 6956408 6956409 VC0395_A0423 VC0395_A0424   queF TRUE 0.712 15.000 0.104 1.000   NA
 6956410 6956411 VC0395_A0425 VC0395_A0426 syd   TRUE 0.982 2.000 0.443 NA   NA
 6956412 6956413 VC0395_A0427 VC0395_A0428 metQ   TRUE 0.952 19.000 0.321 NA Y NA
 6956413 6956414 VC0395_A0428 VC0395_A0429   metN TRUE 0.986 -10.000 0.584 1.000 Y NA
 6956415 6956416 VC0395_A0430 VC0395_A0431   treR FALSE 0.014 65.000 0.045 1.000 N NA
 6956416 6956417 VC0395_A0431 VC0395_A0432 treR treB FALSE 0.028 237.000 0.168 1.000 N NA
 6956417 6956418 VC0395_A0432 VC0395_A0433 treB treC TRUE 0.862 80.000 0.650 1.000 Y NA
 6956419 6956420 VC0395_A0434 VC0395_A0435     FALSE 0.268 85.000 0.000 NA   NA
 6956420 6956421 VC0395_A0435 VC0395_A0436     FALSE 0.268 85.000 0.000 NA   NA
 6956421 6956422 VC0395_A0436 VC0395_A0437     FALSE 0.266 86.000 0.000 NA   NA
 6956423 6956424 VC0395_A0438 VC0395_A0439     TRUE 0.601 0.000 0.078 NA N NA
 6956424 6956425 VC0395_A0439 VC0395_A0440     FALSE 0.003 427.000 0.000 NA N NA
 6956425 6956426 VC0395_A0440 VC0395_A0441   wecB FALSE 0.004 313.000 0.000 1.000 N NA
 6956426 6956427 VC0395_A0441 VC0395_A0442 wecB wecC TRUE 0.961 20.000 0.500 1.000 Y NA
 6956427 6956428 VC0395_A0442 VC0395_A0443 wecC   TRUE 0.954 -3.000 0.333 1.000 N NA
 6956428 6956429 VC0395_A0443 VC0395_A0444     TRUE 0.969 -3.000 0.500 1.000 N NA
 6956429 6956430 VC0395_A0444 VC0395_A0445     TRUE 0.981 -3.000 0.600 NA   NA
 6956430 6956431 VC0395_A0445 VC0395_A0446     TRUE 0.746 15.000 0.000 NA   NA
 6956431 6956432 VC0395_A0446 VC0395_A0447     TRUE 0.980 -3.000 0.571 NA   NA
 6956432 6956433 VC0395_A0447 VC0395_A0448     TRUE 0.985 11.000 0.857 NA   NA
 6956433 6956434 VC0395_A0448 VC0395_A0449     TRUE 0.906 0.000 0.167 1.000 N NA
 6956434 6956435 VC0395_A0449 VC0395_A0450     FALSE 0.539 -24.000 0.101 1.000 N NA
 6956435 6956436 VC0395_A0450 VC0395_A0451     FALSE 0.227 36.000 0.056 NA   NA
 6956436 6956437 VC0395_A0451 VC0395_A0452   cpsF TRUE 0.834 -10.000 0.113 NA   NA
 6956437 6956438 VC0395_A0452 VC0395_A0453 cpsF   FALSE 0.023 196.000 0.065 NA   NA
 6956441 6956442 VC0395_A0456 VC0395_A0457     FALSE 0.063 176.000 0.103 NA   NA
 6956443 6956444 VC0395_A0458 VC0395_A0459     TRUE 0.675 71.000 0.395 NA   NA
 6956444 6956445 VC0395_A0459 VC0395_A0460     TRUE 0.984 4.000 0.474 NA   NA
 6956445 6956446 VC0395_A0460 VC0395_A0461     TRUE 0.947 25.000 0.581 1.000 Y NA
 6956446 6956447 VC0395_A0461 VC0395_A0462     TRUE 0.647 33.000 0.194 1.000   NA
 6956447 6956448 VC0395_A0462 VC0395_A0463     TRUE 0.970 -6.000 0.455 NA   NA
 6956451 6956452 VC0395_A0466 VC0395_A0467   lipA FALSE 0.029 169.000 0.008 NA   NA
 6956452 6956453 VC0395_A0467 VC0395_A0468 lipA lipB TRUE 0.995 -7.000 0.319 0.001 Y NA
 6956453 6956454 VC0395_A0468 VC0395_A0469 lipB   FALSE 0.165 179.000 0.219 NA   NA
 6956454 6956455 VC0395_A0469 VC0395_A0470   dacA-1 FALSE 0.045 148.000 0.014 NA   NA
 6956455 6956456 VC0395_A0470 VC0395_A0471 dacA-1   FALSE 0.440 92.000 0.057 NA Y NA
 6956456 6956457 VC0395_A0471 VC0395_A0472   rodA FALSE 0.225 0.000 0.043 NA N NA
 6956457 6956458 VC0395_A0472 VC0395_A0473 rodA mrdA FALSE 0.185 -3.000 0.014 1.000 N NA
 6956458 6956459 VC0395_A0473 VC0395_A0474 mrdA   TRUE 0.711 7.000 0.015 NA   NA
 6956459 6956460 VC0395_A0474 VC0395_A0475     TRUE 0.975 3.000 0.307 NA   NA
 6956460 6956461 VC0395_A0475 VC0395_A0476   holA FALSE 0.100 69.000 0.013 NA   NA
 6956461 6956462 VC0395_A0476 VC0395_A0477 holA rlpB TRUE 0.940 6.000 0.199 NA N NA
 6956462 6956463 VC0395_A0477 VC0395_A0478 rlpB leuS FALSE 0.187 150.000 0.182 NA N NA
 6956465 6956466 VC0395_A0480 VC0395_A0481 lnt   TRUE 0.760 41.000 0.557 1.000 N NA
 6956466 6956467 VC0395_A0481 VC0395_A0482     FALSE 0.399 70.000 0.150 NA   NA
 6956467 6956468 VC0395_A0482 VC0395_A0483     TRUE 0.975 -3.000 0.457 NA   NA
 6956468 6956469 VC0395_A0483 VC0395_A0484     FALSE 0.421 68.000 0.220 1.000 N NA
 6956471 6956472 VC0395_A0486 VC0395_A0487 crr ptsI TRUE 0.874 109.000 0.203 0.008 Y NA
 6956472 6956473 VC0395_A0487 VC0395_A0488 ptsI ptsH TRUE 0.811 134.000 0.187 0.008 Y NA
 6956473 6956474 VC0395_A0488 VC0395_A0489 ptsH cysK FALSE 0.000 298.000 0.019 1.000 N NA
 6956474 6956475 VC0395_A0489 VC0395_A0490 cysK cysZ FALSE 0.499 123.000 0.122 1.000 Y NA
 6956476 6956477 VC0395_A0491 VC0395_A0492 zipA ligA FALSE 0.082 133.000 0.106 1.000 N NA
 6956477 6956478 VC0395_A0492 VC0395_A0493 ligA   FALSE 0.002 632.000 0.000 1.000 N NA
 6956478 6956479 VC0395_A0493 VC0395_A0494     TRUE 0.635 77.000 0.333 NA   NA
 6956479 6956480 VC0395_A0494 VC0395_A0495     FALSE 0.274 61.000 0.100 NA   NA
 6956481 6956482 VC0395_A0496 VC0395_A0497     TRUE 0.988 8.000 0.313 NA Y NA
 6956482 6956483 VC0395_A0497 VC0395_A0498     FALSE 0.013 431.000 0.075 NA Y NA
 6956483 6956484 VC0395_A0498 VC0395_A0499     FALSE 0.022 172.000 0.022 NA   NA
 6956484 6956485 VC0395_A0499 VC0395_A0500     FALSE 0.092 75.000 0.024 NA   NA
 6956485 6956486 VC0395_A0500 VC0395_A0501   rcp FALSE 0.237 43.000 0.083 1.000   NA
 6956488 6956489 VC0395_A0503 VC0395_A0504   toxS FALSE 0.139 41.000 0.027 NA   NA
 6956489 6956490 VC0395_A0504 VC0395_A0505 toxS toxR TRUE 0.967 10.000 0.294 NA   NA
 6956491 6956492 VC0395_A0506 VC0395_A0507 htpG adk FALSE 0.012 335.000 0.035 0.098 N NA
 6956492 6956493 VC0395_A0507 VC0395_A0508 adk hemH FALSE 0.131 115.000 0.113 1.000 N NA
 6956495 6956496 VC0395_A0510 VC0395_A0511   rfaH FALSE 0.030 162.000 0.036 NA   NA
 6956497 6956498 VC0395_A0512 VC0395_A0513 asnB   FALSE 0.002 196.000 0.027 1.000 N NA
 6956498 6956499 VC0395_A0513 VC0395_A0514   nagC FALSE 0.357 95.000 0.200 1.000 N NA
 6956499 6956500 VC0395_A0514 VC0395_A0515 nagC nagA TRUE 0.993 3.000 0.571 1.000 Y NA
 6956501 6956502 VC0395_A0516 VC0395_A0517 nagE glnS FALSE 0.001 248.000 0.006 1.000 N NA
 6956502 6956503 VC0395_A0517 VC0395_A0519 glnS   FALSE 0.031 165.000 0.008 NA   NA
 6956505 6956506 VC0395_A0520 VC0395_A0521 truA accD FALSE 0.003 174.000 0.044 1.000 N NA
 6956506 6956507 VC0395_A0521 VC0395_A0522 accD folC TRUE 0.668 45.000 0.383 1.000 N NA
 6956507 6956508 VC0395_A0522 VC0395_A0523 folC dedD TRUE 0.962 1.000 0.216 NA   NA
 6956508 6956509 VC0395_A0523 VC0395_A0524 dedD   FALSE 0.328 63.000 0.116 NA   NA
 6956509 6956510 VC0395_A0524 VC0395_A0525   purF TRUE 0.725 33.000 0.262 1.000   NA
 6956511 6956512 VC0395_A0526 VC0395_A0527   rnt FALSE 0.164 101.000 0.084 1.000   NA
 6956512 6956513 VC0395_A0527 VC0395_A0528 rnt   FALSE 0.528 13.000 0.014 NA   NA
 6956515 6956516 VC0395_A0530 VC0395_A0531   gloA FALSE 0.038 160.000 0.047 NA   NA
 6956516 6956517 VC0395_A0531 VC0395_A0532 gloA nth FALSE 0.021 41.000 0.013 1.000 N NA
 6956517 6956518 VC0395_A0532 VC0395_A0533 nth   FALSE 0.310 27.000 0.109 1.000 N NA
 6956518 6956519 VC0395_A0533 VC0395_A0534     TRUE 0.998 2.000 0.908 0.036 Y NA
 6956519 6956520 VC0395_A0534 VC0395_A0535   rnfD TRUE 0.996 12.000 0.924 0.036 Y NA
 6956520 6956521 VC0395_A0535 VC0395_A0536 rnfD   TRUE 0.998 0.000 0.814 0.036 Y NA
 6956521 6956522 VC0395_A0536 VC0395_A0537     TRUE 0.997 9.000 0.537 0.036 Y NA
 6956522 6956523 VC0395_A0537 VC0395_A0538     TRUE 0.997 0.000 0.564 0.036 Y NA
 6956523 6956524 VC0395_A0538 VC0395_A0539     FALSE 0.102 160.000 0.000 NA   NA
 6956525 6956526 VC0395_A0540 VC0395_A0541 uvrB luxO FALSE 0.013 431.000 0.000 0.098 N NA
 6956526 6956527 VC0395_A0541 VC0395_A0543 luxO luxU TRUE 0.988 4.000 0.654 NA   NA
 6956529 6956530 VC0395_A0544 VC0395_A0545 moaA moaB TRUE 0.859 60.000 0.108 0.003 Y NA
 6956530 6956531 VC0395_A0545 VC0395_A0546 moaB moaC TRUE 0.992 8.000 0.109 0.003 Y NA
 6956531 6956532 VC0395_A0546 VC0395_A0547 moaC moaD TRUE 0.992 -3.000 0.175 0.003 Y NA
 6956532 6956533 VC0395_A0547 VC0395_A0548 moaD moaE TRUE 0.998 2.000 0.501 0.003 Y NA
 6956535 6956536 VC0395_A0550 VC0395_A0551   zntA FALSE 0.529 113.000 0.125 0.049 N NA
 6956536 6956537 VC0395_A0551 VC0395_A0552 zntA udp-1 FALSE 0.002 446.000 0.000 1.000 N NA
 6956538 6956539 VC0395_A0553 VC0395_A0554   metG FALSE 0.028 226.000 0.000 NA   NA
 6956540 6956541 VC0395_A0555 VC0395_A0556 mrp udk FALSE 0.215 150.000 0.073 0.098 N NA
 6956541 6956542 VC0395_A0556 VC0395_A0557 udk asmA FALSE 0.012 98.000 0.037 NA N NA
 6956545 6956546 VC0395_A0560 VC0395_A0561 fadL-1 fadL-2 FALSE 0.103 303.000 0.000 0.042 Y NA
 6956546 6956547 VC0395_A0561 VC0395_A0562 fadL-2   FALSE 0.018 260.000 0.000 NA   NA
 6956547 6956548 VC0395_A0562 VC0395_A0563     TRUE 0.983 -7.000 0.946 NA   NA
 6956549 6956550 VC0395_A0564 VC0395_A0565 fadI fadJ TRUE 0.990 0.000 0.430 1.000 Y NA
 6956550 6956551 VC0395_A0565 VC0395_A0566 fadJ   FALSE 0.009 127.000 0.011 1.000 N NA
 6956553 6956554 VC0395_A0568 VC0395_A0569     FALSE 0.082 170.000 0.000 NA   NA
 6956554 6956555 VC0395_A0569 VC0395_A0570     TRUE 0.893 0.000 0.000 NA   NA
 6956555 6956556 VC0395_A0570 VC0395_A0571   apt FALSE 0.069 132.000 0.043 NA   NA
 6956556 6956557 VC0395_A0571 VC0395_A0572 apt dnaZX FALSE 0.266 19.000 0.088 1.000 N NA
 6956557 6956558 VC0395_A0572 VC0395_A0573 dnaZX   TRUE 0.787 38.000 0.411 NA   NA
 6956558 6956559 VC0395_A0573 VC0395_A0574   recR TRUE 0.960 15.000 0.604 NA   NA
 6956569 6956570 VC0395_A0584 VC0395_A0585     TRUE 0.715 87.000 0.529 NA   NA
 6956570 6956571 VC0395_A0585 VC0395_A0586     FALSE 0.002 542.000 0.000 1.000 N NA
 6956571 6956572 VC0395_A0586 VC0395_A0587   gap FALSE 0.084 97.000 0.096 1.000 N NA
 6956572 6956573 VC0395_A0587 VC0395_A0588 gap   TRUE 0.795 14.000 0.167 1.000 N NA
 6956573 6956574 VC0395_A0588 VC0395_A0589     FALSE 0.148 39.000 0.089 NA N NA
 6956574 6956575 VC0395_A0589 VC0395_A0590     FALSE 0.072 119.000 0.022 NA   NA
 6956575 6956576 VC0395_A0590 VC0395_A0591     FALSE 0.008 353.000 0.000 NA   NA
 6956576 6956577 VC0395_A0591 VC0395_A0592     TRUE 0.797 13.000 0.000 NA   NA
 6956579 6956580 VC0395_A0594 VC0395_A0595     TRUE 0.882 13.000 0.161 NA   NA
 6956581 6956582 VC0395_A0596 VC0395_A0597     TRUE 0.691 79.000 0.444 NA   NA
 6956582 6956583 VC0395_A0597 VC0395_A0598     TRUE 0.672 45.000 0.286 NA   NA
 6956584 6956585 VC0395_A0599 VC0395_A0600     TRUE 0.991 -3.000 0.600 NA Y NA
 6956585 6956586 VC0395_A0600 VC0395_A0601     TRUE 0.969 35.000 0.600 0.021 Y NA
 6956586 6956587 VC0395_A0601 VC0395_A0602     TRUE 0.993 -3.000 0.800 NA Y NA
 6956587 6956588 VC0395_A0602 VC0395_A0603     TRUE 0.974 11.000 0.467 NA   NA
 6956588 6956589 VC0395_A0603 VC0395_A0604     TRUE 0.988 12.000 0.400 0.013   NA
 6956589 6956590 VC0395_A0604 VC0395_A0605     TRUE 0.994 0.000 0.750 1.000 Y NA
 6956590 6956591 VC0395_A0605 VC0395_A0606     TRUE 0.993 17.000 0.857 0.021 Y NA
 6956592 6956593 VC0395_A0607 VC0395_A0608     TRUE 0.931 4.000 0.176 NA N NA
 6956594 6956595 VC0395_A0609 VC0395_A0610 oppA oppB TRUE 0.578 149.000 0.096 0.042 Y NA
 6956595 6956596 VC0395_A0610 VC0395_A0611 oppB oppC TRUE 0.994 14.000 0.870 0.042 Y NA
 6956596 6956597 VC0395_A0611 VC0395_A0612 oppC oppD TRUE 0.945 25.000 0.554 1.000 Y NA
 6956597 6956598 VC0395_A0612 VC0395_A0613 oppD oppF TRUE 0.982 -21.000 0.099 0.002 Y NA
 6956598 6956599 VC0395_A0613 VC0395_A0614 oppF   FALSE 0.058 150.000 0.100 NA N NA
 6956600 6956601 VC0395_A0615 VC0395_A0616 pta ackA-1 TRUE 0.624 136.000 0.634 1.000   NA
 6956604 6956605 VC0395_A0619 VC0395_A0620     TRUE 0.735 76.000 0.562 NA   NA
 6956605 6956606 VC0395_A0620 VC0395_A0621     TRUE 0.984 -3.000 0.771 1.000   NA
 6956606 6956607 VC0395_A0621 VC0395_A0622     FALSE 0.009 213.000 0.048 1.000   NA
 6956608 6956609 VC0395_A0623 VC0395_A0624     TRUE 0.855 22.000 0.013 0.005   NA
 6956610 6956611 VC0395_A0625 VC0395_A0626   lolA FALSE 0.090 96.000 0.014 NA   NA
 6956611 6956612 VC0395_A0626 VC0395_A0627 lolA   TRUE 0.580 25.000 0.167 1.000 N NA
 6956612 6956613 VC0395_A0627 VC0395_A0628   serS FALSE 0.391 104.000 0.078 0.097 N NA
 6956615 6956616 VC0395_A0630 VC0395_A0631 bioB bioF TRUE 0.988 -16.000 0.168 0.002 Y NA
 6956616 6956617 VC0395_A0631 VC0395_A0632 bioF bioC TRUE 0.981 -138.000 0.133 0.002 Y NA
 6956617 6956618 VC0395_A0632 VC0395_A0633 bioC bioD TRUE 0.974 -24.000 0.028 0.002 Y NA
 6956620 6956621 VC0395_A0635 VC0395_A0636 htpX   FALSE 0.034 210.000 0.000 NA   NA
 6956621 6956622 VC0395_A0636 VC0395_A0637     TRUE 0.979 -3.000 0.533 NA   NA
 6956622 6956623 VC0395_A0637 VC0395_A0638     TRUE 0.983 11.000 0.217 0.019   NA
 6956623 6956624 VC0395_A0638 VC0395_A0639     TRUE 0.987 0.000 0.722 NA   NA
 6956624 6956625 VC0395_A0639 VC0395_A0640   cfa TRUE 0.926 -67.000 0.311 NA   NA
 6956625 6956626 VC0395_A0640 VC0395_A0641 cfa   TRUE 0.987 3.000 0.588 NA   NA
 6956626 6956627 VC0395_A0641 VC0395_A0642     TRUE 0.941 -67.000 0.387 NA   NA
 6956627 6956628 VC0395_A0642 VC0395_A0643     TRUE 0.972 -3.000 0.395 NA   NA
 6956629 6956630 VC0395_A0644 VC0395_A0645 purB   FALSE 0.256 58.000 0.093 NA   NA
 6956630 6956631 VC0395_A0645 VC0395_A0646   mnmA TRUE 0.751 23.000 0.180 NA   NA
 6956634 6956635 VC0395_A0649 VC0395_A0650     TRUE 0.952 12.000 0.000 0.048   NA
 6956635 6956636 VC0395_A0650 VC0395_A0651     TRUE 0.957 27.000 0.500 0.007   NA
 6956636 6956637 VC0395_A0651 VC0395_A0652     TRUE 0.988 8.000 0.750 NA   NA
 6956637 6956638 VC0395_A0652 VC0395_A0653     TRUE 0.980 10.000 0.500 NA   NA
 6956638 6956639 VC0395_A0653 VC0395_A0654     TRUE 0.984 10.000 0.667 NA   NA
 6956639 6956640 VC0395_A0654 VC0395_A0655     TRUE 0.969 -25.000 0.667 NA   NA
 6956640 6956641 VC0395_A0655 VC0395_A0656     TRUE 0.808 -13.000 0.000 NA   NA
 6956641 6956642 VC0395_A0656 VC0395_A0657     TRUE 0.878 10.000 0.000 NA   NA
 6956642 6956643 VC0395_A0657 VC0395_A0658     TRUE 0.980 -7.000 0.750 NA   NA
 6956643 6956644 VC0395_A0658 VC0395_A0659     TRUE 0.975 -16.000 0.750 NA   NA
 6956644 6956645 VC0395_A0659 VC0395_A0660     TRUE 0.866 -3.000 0.000 NA   NA
 6956645 6956646 VC0395_A0660 VC0395_A0661     TRUE 0.866 -3.000 0.000 NA   NA
 6956646 6956647 VC0395_A0661 VC0395_A0662     FALSE 0.273 80.000 0.000 NA   NA
 6956647 6956648 VC0395_A0662 VC0395_A0663     FALSE 0.031 214.000 0.000 NA   NA
 6956648 6956649 VC0395_A0663 VC0395_A0664     TRUE 0.808 -13.000 0.000 NA   NA
 6956649 6956650 VC0395_A0664 VC0395_A0665     FALSE 0.273 79.000 0.000 NA   NA
 6956650 6956651 VC0395_A0665 VC0395_A0666     TRUE 0.709 85.000 0.500 NA   NA
 6956651 6956652 VC0395_A0666 VC0395_A0667     TRUE 0.978 0.000 0.375 NA   NA
 6956652 6956653 VC0395_A0667 VC0395_A0668     TRUE 0.960 -24.000 0.500 NA   NA
 6956653 6956654 VC0395_A0668 VC0395_A0669     TRUE 0.971 -3.000 0.364 NA   NA
 6956654 6956655 VC0395_A0669 VC0395_A0670     TRUE 0.960 0.000 0.222 NA   NA
 6956655 6956656 VC0395_A0670 VC0395_A0671     TRUE 0.896 9.000 0.111 NA   NA
 6956656 6956657 VC0395_A0671 VC0395_A0672     TRUE 0.975 12.000 0.600 NA   NA
 6956657 6956658 VC0395_A0672 VC0395_A0673     TRUE 0.980 1.000 0.400 NA   NA
 6956658 6956659 VC0395_A0673 VC0395_A0674     TRUE 0.953 -3.000 0.238 NA   NA
 6956659 6956660 VC0395_A0674 VC0395_A0675     TRUE 0.964 -7.000 0.381 NA   NA
 6956660 6956661 VC0395_A0675 VC0395_A0676     TRUE 0.906 12.000 0.167 NA   NA
 6956661 6956662 VC0395_A0676 VC0395_A0677     TRUE 0.985 -3.000 0.750 NA   NA
 6956662 6956663 VC0395_A0677 VC0395_A0678     TRUE 0.977 -3.000 0.500 NA   NA
 6956663 6956664 VC0395_A0678 VC0395_A0679     TRUE 0.982 0.000 0.500 NA   NA
 6956664 6956665 VC0395_A0679 VC0395_A0680     FALSE 0.007 366.000 0.000 NA   NA
 6956665 6956666 VC0395_A0680 VC0395_A0681     FALSE 0.275 72.000 0.000 NA   NA
 6956666 6956667 VC0395_A0681 VC0395_A0682     TRUE 0.958 3.000 0.190 NA   NA
 6956667 6956668 VC0395_A0682 VC0395_A0683     TRUE 0.686 67.000 0.400 NA   NA
 6956668 6956669 VC0395_A0683 VC0395_A0684     TRUE 0.882 6.000 0.098 NA   NA
 6956669 6956670 VC0395_A0684 VC0395_A0685     TRUE 0.973 0.000 0.317 NA   NA
 6956670 6956671 VC0395_A0685 VC0395_A0686     TRUE 0.866 -3.000 0.000 NA   NA
 6956671 6956672 VC0395_A0686 VC0395_A0687     TRUE 0.771 14.000 0.000 NA   NA
 6956672 6956673 VC0395_A0687 VC0395_A0688     TRUE 0.968 3.000 0.240 NA   NA
 6956673 6956674 VC0395_A0688 VC0395_A0689     TRUE 0.965 15.000 0.720 NA   NA
 6956674 6956675 VC0395_A0689 VC0395_A0690     TRUE 0.899 0.000 0.111 NA   NA
 6956675 6956676 VC0395_A0690 VC0395_A0691     FALSE 0.502 126.000 0.286 NA   NA
 6956676 6956677 VC0395_A0691 VC0395_A0692     TRUE 0.949 12.000 0.286 NA   NA
 6956677 6956678 VC0395_A0692 VC0395_A0693     TRUE 0.797 -7.000 0.094 NA   NA
 6956678 6956679 VC0395_A0693 VC0395_A0694     TRUE 0.961 -3.000 0.281 NA   NA
 6956679 6956680 VC0395_A0694 VC0395_A0695     TRUE 0.989 3.000 0.692 NA   NA
 6956680 6956681 VC0395_A0695 VC0395_A0696     TRUE 0.960 -10.000 0.375 NA   NA
 6956681 6956682 VC0395_A0696 VC0395_A0697     TRUE 0.956 -15.000 0.375 NA   NA
 6956682 6956683 VC0395_A0697 VC0395_A0698     TRUE 0.949 0.000 0.182 NA   NA
 6956683 6956684 VC0395_A0698 VC0395_A0699     TRUE 0.975 0.000 0.333 NA   NA
 6956686 6956687 VC0395_A0701 VC0395_A0702   hisG FALSE 0.003 391.000 0.000 NA N NA
 6956687 6956688 VC0395_A0702 VC0395_A0703 hisG hisD TRUE 0.995 5.000 0.171 0.003 Y NA
 6956688 6956689 VC0395_A0703 VC0395_A0704 hisD hisC TRUE 0.997 4.000 0.294 0.003 Y NA
 6956689 6956690 VC0395_A0704 VC0395_A0705 hisC hisB TRUE 0.946 52.000 0.341 0.003 Y NA
 6956690 6956691 VC0395_A0705 VC0395_A0706 hisB hisH TRUE 0.993 0.000 0.128 0.003 Y NA
 6956691 6956692 VC0395_A0706 VC0395_A0707 hisH hisA TRUE 0.931 43.000 0.210 0.003 Y NA
 6956692 6956693 VC0395_A0707 VC0395_A0708 hisA hisF TRUE 0.994 -18.000 0.433 0.003 Y NA
 6956693 6956694 VC0395_A0708 VC0395_A0709 hisF hisI TRUE 0.996 -3.000 0.430 0.003 Y NA
 6956698 6956699 VC0395_A0713 VC0395_A0714 clpS clpA TRUE 0.831 39.000 0.596 NA   NA
 6956700 6956701 VC0395_A0715 VC0395_A0716   grxA FALSE 0.036 202.000 0.000 1.000   NA
 6956703 6956704 VC0395_A0718 VC0395_A0719     FALSE 0.005 308.000 0.000 1.000 N NA
 6956704 6956705 VC0395_A0719 VC0395_A0720     FALSE 0.479 110.000 0.212 NA   NA
 6956705 6956706 VC0395_A0720 VC0395_A0721     FALSE 0.160 93.000 0.071 NA   NA
 6956706 6956707 VC0395_A0721 VC0395_A0722     TRUE 0.648 21.000 0.113 NA   NA
 6956709 6956710 VC0395_A0724 VC0395_A0725     FALSE 0.225 191.000 0.412 NA   NA
 6956710 6956711 VC0395_A0725 VC0395_A0726     TRUE 0.993 -3.000 0.857 1.000 Y NA
 6956712 6956713 VC0395_A0727 VC0395_A0728   serC FALSE 0.100 77.000 0.012 NA   NA
 6956714 6956715 VC0395_A0729 VC0395_A0730     TRUE 0.990 0.000 0.923 NA   NA
 6956715 6956716 VC0395_A0730 VC0395_A0731     TRUE 0.951 9.000 0.192 NA   NA
 6956716 6956717 VC0395_A0731 VC0395_A0732     FALSE 0.010 120.000 0.030 NA N NA
 6956717 6956718 VC0395_A0732 VC0395_A0733     TRUE 0.582 112.000 0.315 NA   NA
 6956718 6956719 VC0395_A0733 VC0395_A0734     FALSE 0.096 126.000 0.055 NA   NA
 6956720 6956721 VC0395_A0735 VC0395_A0736 aspS tdk FALSE 0.344 97.000 0.003 0.095 N NA
 6956722 6956723 VC0395_A0737 VC0395_A0738     FALSE 0.396 38.000 0.000 NA   NA
 6956723 6956724 VC0395_A0738 VC0395_A0739     TRUE 0.975 0.000 0.333 NA   NA
 6956724 6956725 VC0395_A0739 VC0395_A0740     TRUE 0.949 0.000 0.182 NA   NA
 6956725 6956726 VC0395_A0740 VC0395_A0741     TRUE 0.956 -15.000 0.375 NA   NA
 6956726 6956727 VC0395_A0741 VC0395_A0742     TRUE 0.960 -10.000 0.375 NA   NA
 6956727 6956728 VC0395_A0742 VC0395_A0743     TRUE 0.989 3.000 0.692 NA   NA
 6956728 6956729 VC0395_A0743 VC0395_A0744     TRUE 0.961 -3.000 0.281 NA   NA
 6956729 6956730 VC0395_A0744 VC0395_A0745     TRUE 0.797 -7.000 0.094 NA   NA
 6956730 6956731 VC0395_A0745 VC0395_A0746     TRUE 0.949 12.000 0.286 NA   NA
 6956731 6956732 VC0395_A0746 VC0395_A0747     FALSE 0.502 126.000 0.286 NA   NA
 6956732 6956733 VC0395_A0747 VC0395_A0748     TRUE 0.899 0.000 0.111 NA   NA
 6956733 6956734 VC0395_A0748 VC0395_A0749     TRUE 0.965 15.000 0.720 NA   NA
 6956734 6956735 VC0395_A0749 VC0395_A0750     TRUE 0.968 3.000 0.240 NA   NA
 6956735 6956736 VC0395_A0750 VC0395_A0751     TRUE 0.771 14.000 0.000 NA   NA
 6956736 6956737 VC0395_A0751 VC0395_A0752     TRUE 0.866 -3.000 0.000 NA   NA
 6956737 6956738 VC0395_A0752 VC0395_A0753     TRUE 0.973 0.000 0.317 NA   NA
 6956738 6956739 VC0395_A0753 VC0395_A0754     TRUE 0.882 6.000 0.098 NA   NA
 6956739 6956740 VC0395_A0754 VC0395_A0755     TRUE 0.686 67.000 0.400 NA   NA
 6956740 6956741 VC0395_A0755 VC0395_A0756     TRUE 0.958 3.000 0.190 NA   NA
 6956741 6956742 VC0395_A0756 VC0395_A0757     FALSE 0.275 72.000 0.000 NA   NA
 6956742 6956743 VC0395_A0757 VC0395_A0758     FALSE 0.007 366.000 0.000 NA   NA
 6956743 6956744 VC0395_A0758 VC0395_A0759     TRUE 0.982 0.000 0.500 NA   NA
 6956744 6956745 VC0395_A0759 VC0395_A0760     TRUE 0.977 -3.000 0.500 NA   NA
 6956745 6956746 VC0395_A0760 VC0395_A0761     TRUE 0.985 -3.000 0.750 NA   NA
 6956746 6956747 VC0395_A0761 VC0395_A0762     TRUE 0.906 12.000 0.167 NA   NA
 6956747 6956748 VC0395_A0762 VC0395_A0763     TRUE 0.964 -7.000 0.381 NA   NA
 6956748 6956749 VC0395_A0763 VC0395_A0764     TRUE 0.953 -3.000 0.238 NA   NA
 6956749 6956750 VC0395_A0764 VC0395_A0765     TRUE 0.980 1.000 0.400 NA   NA
 6956750 6956751 VC0395_A0765 VC0395_A0766     TRUE 0.975 12.000 0.600 NA   NA
 6956751 6956752 VC0395_A0766 VC0395_A0767     TRUE 0.896 9.000 0.111 NA   NA
 6956752 6956753 VC0395_A0767 VC0395_A0768     TRUE 0.960 0.000 0.222 NA   NA
 6956753 6956754 VC0395_A0768 VC0395_A0769     TRUE 0.971 -3.000 0.364 NA   NA
 6956754 6956755 VC0395_A0769 VC0395_A0770     TRUE 0.960 -24.000 0.500 NA   NA
 6956755 6956756 VC0395_A0770 VC0395_A0771     TRUE 0.978 0.000 0.375 NA   NA
 6956756 6956757 VC0395_A0771 VC0395_A0772     TRUE 0.709 85.000 0.500 NA   NA
 6956757 6956758 VC0395_A0772 VC0395_A0773     FALSE 0.273 79.000 0.000 NA   NA
 6956758 6956759 VC0395_A0773 VC0395_A0774     TRUE 0.808 -13.000 0.000 NA   NA
 6956759 6956760 VC0395_A0774 VC0395_A0775     FALSE 0.031 214.000 0.000 NA   NA
 6956760 6956761 VC0395_A0775 VC0395_A0776     FALSE 0.273 80.000 0.000 NA   NA
 6956761 6956762 VC0395_A0776 VC0395_A0777     TRUE 0.866 -3.000 0.000 NA   NA
 6956762 6956763 VC0395_A0777 VC0395_A0778     TRUE 0.866 -3.000 0.000 NA   NA
 6956763 6956764 VC0395_A0778 VC0395_A0779     TRUE 0.975 -16.000 0.750 NA   NA
 6956764 6956765 VC0395_A0779 VC0395_A0780     TRUE 0.980 -7.000 0.750 NA   NA
 6956765 6956766 VC0395_A0780 VC0395_A0781     TRUE 0.878 10.000 0.000 NA   NA
 6956766 6956767 VC0395_A0781 VC0395_A0782     TRUE 0.808 -13.000 0.000 NA   NA
 6956767 6956768 VC0395_A0782 VC0395_A0783     TRUE 0.969 -25.000 0.667 NA   NA
 6956768 6956769 VC0395_A0783 VC0395_A0784     TRUE 0.984 10.000 0.667 NA   NA
 6956769 6956770 VC0395_A0784 VC0395_A0785     TRUE 0.980 10.000 0.500 NA   NA
 6956770 6956771 VC0395_A0785 VC0395_A0786     TRUE 0.988 8.000 0.750 NA   NA
 6956771 6956772 VC0395_A0786 VC0395_A0787     TRUE 0.958 27.000 0.500 0.006   NA
 6956772 6956773 VC0395_A0787 VC0395_A0788     TRUE 0.952 12.000 0.000 0.047   NA
 6956775 6956776 VC0395_A0790 VC0395_A0791   trpA FALSE 0.002 316.000 0.018 1.000   NA
 6956776 6956777 VC0395_A0791 VC0395_A0792 trpA trpB TRUE 0.999 0.000 0.947 0.001 Y NA
 6956777 6956778 VC0395_A0792 VC0395_A0793 trpB trpC/F TRUE 0.948 41.000 0.221 0.001 Y NA
 6956778 6956779 VC0395_A0793 VC0395_A0794 trpC/F trpD TRUE 0.987 6.000 0.293 1.000 Y NA
 6956779 6956780 VC0395_A0794 VC0395_A0795 trpD trpG TRUE 0.805 21.000 0.083 1.000 Y NA
 6956780 6956781 VC0395_A0795 VC0395_A0796 trpG trpE TRUE 0.998 -3.000 0.703 0.001 Y NA
 6956781 6956782 VC0395_A0796 VC0395_A0797 trpE   FALSE 0.108 134.000 0.070 NA   NA
 6956783 6956784 VC0395_A0798 VC0395_A0799     TRUE 0.973 3.000 0.281 NA   NA
 6956784 6956785 VC0395_A0799 VC0395_A0800     FALSE 0.367 133.000 0.075 NA Y NA
 6956786 6956787 VC0395_A0801 VC0395_A0802 cydC cydD TRUE 0.995 -7.000 0.631 0.058 Y NA
 6956787 6956788 VC0395_A0802 VC0395_A0803 cydD trxB FALSE 0.358 120.000 0.049 1.000 Y NA
 6956789 6956790 VC0395_A0804 VC0395_A0805     TRUE 0.920 -25.000 0.242 NA   NA
 6956790 6956791 VC0395_A0805 VC0395_A0806     FALSE 0.008 258.000 0.000 1.000 N NA
 6956792 6956793 VC0395_A0807 VC0395_A0808 sanA   FALSE 0.141 72.000 0.058 NA   NA
 6956793 6956794 VC0395_A0808 VC0395_A0809   sfcA TRUE 0.953 4.000 0.178 NA   NA
 6956796 6956797 VC0395_A0811 VC0395_A0812     FALSE 0.394 55.000 0.128 NA   NA
 6956797 6956798 VC0395_A0812 VC0395_A0813     FALSE 0.013 292.000 0.000 NA   NA
 6956798 6956799 VC0395_A0813 VC0395_A0814     FALSE 0.467 136.000 0.308 NA   NA
 6956799 6956800 VC0395_A0814 VC0395_A0815     FALSE 0.072 65.000 0.018 1.000   NA
 6956800 6956801 VC0395_A0815 VC0395_A0816     FALSE 0.101 100.000 0.044 NA   NA
 6956801 6956802 VC0395_A0816 VC0395_A0817     FALSE 0.459 125.000 0.239 NA   NA
 6956803 6956804 VC0395_A0818 VC0395_A0819     FALSE 0.320 50.000 0.139 NA N NA
 6956804 6956805 VC0395_A0819 VC0395_A0820     FALSE 0.040 250.000 0.043 NA Y NA
 6956806 6956807 VC0395_A0821 VC0395_A0822   hutH FALSE 0.041 149.000 0.019 NA   NA
 6956807 6956808 VC0395_A0822 VC0395_A0823 hutH hutU TRUE 0.995 12.000 0.315 0.001 Y NA
 6956808 6956809 VC0395_A0823 VC0395_A0824 hutU hutG TRUE 0.973 19.000 0.114 0.001 Y NA
 6956809 6956810 VC0395_A0824 VC0395_A0825 hutG hutI TRUE 0.846 -10.000 0.171 1.000 N NA
 6956810 6956811 VC0395_A0825 VC0395_A0826 hutI hutC FALSE 0.063 104.000 0.090 1.000 N NA
 6956811 6956812 VC0395_A0826 VC0395_A0827 hutC   FALSE 0.249 117.000 0.120 1.000   NA
 6956812 6956813 VC0395_A0827 VC0395_A0828     FALSE 0.099 139.000 0.073 NA   NA
 6956813 6956814 VC0395_A0828 VC0395_A0829     TRUE 0.960 5.000 0.203 NA   NA
 6956815 6956816 VC0395_A0830 VC0395_A0832     FALSE 0.500 94.000 0.235 1.000   NA
 6956818 6956819 VC0395_A0833 VC0395_A0834   uvrC TRUE 0.962 0.000 0.086 0.018 N NA
 6956819 6956820 VC0395_A0834 VC0395_A0835 uvrC pgsA FALSE 0.493 48.000 0.227 1.000 N NA
 6956820 6956821 VC0395_A0835 VC0395_A0836 pgsA   FALSE 0.019 258.000 0.000 NA   NA
 6956821 6956822 VC0395_A0836 VC0395_A0837     TRUE 0.905 3.000 0.000 NA   NA
 6956822 6956823 VC0395_A0837 VC0395_A0838     FALSE 0.289 65.000 0.000 NA   NA
 6956823 6956824 VC0395_A0838 VC0395_A0839     TRUE 0.858 11.000 0.000 NA   NA
 6956824 6956825 VC0395_A0839 VC0395_A0841     FALSE 0.021 247.000 0.000 NA   NA
 6956827 6956828 VC0395_A0842 VC0395_A0843   pheS FALSE 0.237 32.000 0.003 NA   NA
 6956828 6956829 VC0395_A0843 VC0395_A0844 pheS pheT TRUE 0.985 27.000 0.574 0.001 Y NA
 6956829 6956830 VC0395_A0844 VC0395_A0845 pheT   FALSE 0.015 283.000 0.000 NA   NA
 6956830 6956831 VC0395_A0845 VC0395_A0846   ihfA FALSE 0.326 22.000 0.008 NA   NA
 6956832 6956833 VC0395_A0847 VC0395_A0848     TRUE 0.551 67.000 0.235 NA   NA
 6956835 6956836 VC0395_A0850 VC0395_A0851 purT   FALSE 0.067 148.000 0.068 1.000   NA
 6956836 6956837 VC0395_A0851 VC0395_A0852   cdd FALSE 0.036 159.000 0.055 1.000   NA
 6956837 6956838 VC0395_A0852 VC0395_A0853 cdd   FALSE 0.003 170.000 0.066 1.000 N NA
 6956838 6956839 VC0395_A0853 VC0395_A0854     TRUE 0.849 -9.000 0.124 1.000   NA
 6956839 6956840 VC0395_A0854 VC0395_A0855   sbcB TRUE 0.583 17.000 0.086 1.000   NA
 6956840 6956841 VC0395_A0855 VC0395_A0856 sbcB   FALSE 0.036 146.000 0.040 1.000   NA
 6956842 6956843 VC0395_A0857 VC0395_A0858     FALSE 0.031 214.000 0.000 NA   NA
 6956843 6956844 VC0395_A0858 VC0395_A0859   cobT FALSE 0.055 200.000 0.125 NA   NA
 6956844 6956845 VC0395_A0859 VC0395_A0860 cobT cobS TRUE 0.988 0.000 0.049 0.004 Y NA
 6956845 6956846 VC0395_A0860 VC0395_A0861 cobS cobU TRUE 0.938 9.000 0.043 1.000 Y NA
 6956846 6956847 VC0395_A0861 VC0395_A0862 cobU   TRUE 0.900 7.000 0.155 1.000 N NA
 6956847 6956848 VC0395_A0862 VC0395_A0863   astE FALSE 0.004 316.000 0.000 1.000 N NA
 6956848 6956849 VC0395_A0863 VC0395_A0864 astE   TRUE 0.553 69.000 0.333 1.000 N NA
 6956849 6956850 VC0395_A0864 VC0395_A0865     TRUE 0.978 -13.000 0.356 1.000 Y NA
 6956851 6956852 VC0395_A0866 VC0395_A0867     FALSE 0.058 179.000 0.102 NA   NA
 6956852 6956853 VC0395_A0867 VC0395_A0868     FALSE 0.307 48.000 0.100 NA   NA
 6956853 6956854 VC0395_A0868 VC0395_A0869     FALSE 0.013 231.000 0.000 NA N NA
 6956854 6956855 VC0395_A0869 VC0395_A0870     FALSE 0.017 266.000 0.000 NA   NA
 6956856 6956857 VC0395_A0871 VC0395_A0872     FALSE 0.007 250.000 0.004 NA   NA
 6956858 6956859 VC0395_A0873 VC0395_A0874   nrdB FALSE 0.225 0.000 0.057 1.000 N NA
 6956859 6956860 VC0395_A0874 VC0395_A0875 nrdB nrdA TRUE 0.925 60.000 0.200 0.001 Y NA
 6956860 6956861 VC0395_A0875 VC0395_A0876 nrdA ubiG FALSE 0.002 449.000 0.000 1.000 N NA
 6956862 6956863 VC0395_A0877 VC0395_A0878 gyrA   FALSE 0.033 213.000 0.000 NA   NA
 6956865 6956866 VC0395_A0880 VC0395_A0881     FALSE 0.174 183.000 0.250 NA   NA
 6956866 6956867 VC0395_A0881 VC0395_A0882   ribA FALSE 0.065 171.000 0.095 NA   NA
 6956867 6956868 VC0395_A0882 VC0395_A0883 ribA   FALSE 0.050 135.000 0.086 NA N NA
 6956868 6956869 VC0395_A0883 VC0395_A0884     FALSE 0.146 207.000 0.436 NA N NA
 6956869 6956870 VC0395_A0884 VC0395_A0885     TRUE 0.985 10.000 0.713 NA   NA
 6956870 6956871 VC0395_A0885 VC0395_A0886     TRUE 0.969 -19.000 0.620 NA   NA
 6956871 6956872 VC0395_A0886 VC0395_A0887     FALSE 0.011 247.000 0.070 NA   NA
 6956872 6956873 VC0395_A0887 VC0395_A0888     FALSE 0.473 146.000 0.372 NA   NA
 6956873 6956874 VC0395_A0888 VC0395_A0890     FALSE 0.231 64.000 0.089 NA   NA
 6956876 6956877 VC0395_A0891 VC0395_A0892     FALSE 0.016 275.000 0.000 NA   NA
 6956877 6956878 VC0395_A0892 VC0395_A0893     TRUE 0.625 102.000 0.154 NA Y NA
 6956878 6956879 VC0395_A0893 VC0395_A0894     TRUE 0.994 10.000 0.827 NA Y NA
 6956879 6956880 VC0395_A0894 VC0395_A0895     TRUE 0.760 107.000 0.354 0.057 N NA
 6956880 6956881 VC0395_A0895 VC0395_A0896     TRUE 0.988 -19.000 0.263 0.023 Y NA
 6956885 6956886 VC0395_A0900 VC0395_A0901 celA celB TRUE 0.929 79.000 0.364 0.006 Y NA
 6956886 6956887 VC0395_A0901 VC0395_A0902 celB celC TRUE 0.947 47.000 0.364 0.006 Y NA
 6956887 6956888 VC0395_A0902 VC0395_A0903 celC celF TRUE 0.987 -18.000 0.800 1.000 Y NA
 6956888 6956889 VC0395_A0903 VC0395_A0904 celF   TRUE 0.979 23.000 1.000 0.014   NA
 6956889 6956890 VC0395_A0904 VC0395_A0905     TRUE 0.720 101.000 0.600 1.000   NA
 6956891 6956892 VC0395_A0906 VC0395_A0907 mdoH mdoG FALSE 0.457 19.000 0.102 NA N NA
 6956894 6956895 VC0395_A0909 VC0395_A0910     TRUE 0.938 -3.000 0.261 1.000 N NA
 6956895 6956896 VC0395_A0910 VC0395_A0911   aspC FALSE 0.006 281.000 0.000 1.000 N NA
 6956896 6956897 VC0395_A0911 VC0395_A0912 aspC   FALSE 0.037 161.000 0.048 NA   NA
 6956897 6956898 VC0395_A0912 VC0395_A0913     TRUE 0.925 -28.000 0.267 NA   NA
 6956900 6956901 VC0395_A0915 VC0395_A0916 asnC   FALSE 0.012 102.000 0.021 1.000 N NA
 6956903 6956904 VC0395_A0918 VC0395_A0919 sdaA-1 sdaC-1 TRUE 0.843 93.000 0.567 NA Y NA
 6956904 6956905 VC0395_A0919 VC0395_A0920 sdaC-1   FALSE 0.000 299.000 0.049 NA N NA
 6956905 6956906 VC0395_A0920 VC0395_A0921   pabB FALSE 0.053 197.000 0.169 1.000 N NA
 6956907 6956908 VC0395_A0922 VC0395_A0923     FALSE 0.041 149.000 0.027 NA   NA
 6956908 6956909 VC0395_A0923 VC0395_A0924     FALSE 0.008 225.000 0.026 NA   NA
 6956909 6956910 VC0395_A0924 VC0395_A0925     TRUE 0.985 -3.000 0.791 NA   NA
 6956910 6956911 VC0395_A0925 VC0395_A0926   tyrR FALSE 0.326 114.000 0.137 NA   NA
 6956911 6956912 VC0395_A0926 VC0395_A0927 tyrR rimJ TRUE 0.837 0.000 0.122 1.000 N NA
 6956912 6956913 VC0395_A0927 VC0395_A0928 rimJ   FALSE 0.136 95.000 0.061 NA   NA
 6956914 6956915 VC0395_A0929 VC0395_A0930     TRUE 0.588 121.000 0.385 1.000   NA
 6956915 6956916 VC0395_A0930 VC0395_A0931     TRUE 0.810 49.000 0.909 1.000 N NA
 6956917 6956918 VC0395_A0932 VC0395_A0933     TRUE 0.970 10.000 0.464 1.000 N NA
 6956918 6956919 VC0395_A0933 VC0395_A0934     TRUE 0.984 -31.000 0.688 1.000 Y NA
 6956920 6956921 VC0395_A0935 VC0395_A0936   ompV TRUE 0.614 98.000 0.333 NA   NA
 6956921 6956922 VC0395_A0936 VC0395_A0937 ompV   FALSE 0.017 213.000 0.000 NA N NA
 6956922 6956923 VC0395_A0937 VC0395_A0938     TRUE 0.862 26.000 0.189 1.000 Y NA
 6956925 6956926 VC0395_A0940 VC0395_A0941     TRUE 0.941 -21.000 0.314 NA   NA
 6956929 6956930 VC0395_A0944 VC0395_A0945 mglA mglC TRUE 0.995 5.000 0.905 1.000 Y NA
 6956930 6956931 VC0395_A0945 VC0395_A0946 mglC   FALSE 0.005 410.000 0.000 1.000   NA
 6956931 6956932 VC0395_A0946 VC0395_A0947     FALSE 0.010 321.000 0.000 NA   NA
 6956933 6956934 VC0395_A0948 VC0395_A0949     TRUE 0.987 10.000 0.844 NA   NA
 6956934 6956935 VC0395_A0949 VC0395_A0950     FALSE 0.153 251.000 0.690 NA   NA
 6956936 6956937 VC0395_A0951 VC0395_A0952   prpB FALSE 0.175 11.000 0.063 1.000 N NA
 6956937 6956938 VC0395_A0952 VC0395_A0953 prpB prpC FALSE 0.260 177.000 0.502 1.000 N NA
 6956938 6956939 VC0395_A0953 VC0395_A0954 prpC acnA TRUE 0.736 110.000 0.289 1.000 Y NA
 6956939 6956940 VC0395_A0954 VC0395_A0955 acnA   TRUE 0.987 9.000 0.733 NA   NA
 6956940 6956941 VC0395_A0955 VC0395_A0956   prpE TRUE 0.648 -16.000 0.063 NA   NA
 6956941 6956942 VC0395_A0956 VC0395_A0957 prpE   FALSE 0.168 174.000 0.045 0.047   NA
 6956942 6956943 VC0395_A0957 VC0395_A0958     TRUE 0.720 81.000 0.556 1.000   NA
 6956945 6956946 VC0395_A0960 VC0395_A0961 hppD   TRUE 0.743 -7.000 0.119 1.000 N NA
 6956946 6956947 VC0395_A0961 VC0395_A0962     TRUE 0.981 7.000 0.195 1.000 Y NA
 6956947 6956948 VC0395_A0962 VC0395_A0964   maiA TRUE 0.968 -3.000 0.495 1.000 N NA
 6956955 6956956 VC0395_A0970 VC0395_A0971     FALSE 0.332 114.000 0.140 NA   NA
 6956956 6956957 VC0395_A0971 VC0395_A0972     FALSE 0.021 245.000 0.000 NA   NA
 6956957 6956958 VC0395_A0972 VC0395_A0973     TRUE 0.718 23.000 0.039 1.000 Y NA
 6956958 6956959 VC0395_A0973 VC0395_A0974     TRUE 0.987 3.000 0.043 0.015 Y NA
 6956959 6956960 VC0395_A0974 VC0395_A0975     TRUE 0.905 126.000 0.548 0.040 Y NA
 6956963 6956964 VC0395_A0978 VC0395_A0980   exsB TRUE 0.930 13.000 0.270 1.000   NA
 6956966 6956967 VC0395_A0981 VC0395_A0982     FALSE 0.116 157.000 0.111 NA   NA
 6956967 6956968 VC0395_A0982 VC0395_A0983     TRUE 0.924 -3.000 0.222 1.000 N NA
 6956971 6956972 VC0395_A0986 VC0395_A0987     TRUE 0.794 42.000 0.079 0.092 Y NA
 6956972 6956973 VC0395_A0987 VC0395_A0988     FALSE 0.404 37.000 0.000 NA   NA
 6956973 6956974 VC0395_A0988 VC0395_A0989     TRUE 0.989 0.000 0.800 NA   NA
 6956974 6956975 VC0395_A0989 VC0395_A0990     TRUE 0.740 -96.000 0.000 NA   NA
 6956976 6956977 VC0395_A0991 VC0395_A0992     TRUE 0.865 18.000 0.237 1.000   NA
 6956977 6956978 VC0395_A0992 VC0395_A0993     TRUE 0.979 2.000 0.364 NA   NA
 6956979 6956980 VC0395_A0994 VC0395_A0995     FALSE 0.314 47.000 0.101 NA   NA
 6956980 6956981 VC0395_A0995 VC0395_A0996     TRUE 0.653 35.000 0.200 NA   NA
 6956982 6956983 VC0395_A0997 VC0395_A0998 hrpA   FALSE 0.037 140.000 0.036 1.000   NA
 6956983 6956984 VC0395_A0998 VC0395_A0999     FALSE 0.027 217.000 0.000 1.000   NA
 6956984 6956985 VC0395_A0999 VC0395_A1000   lplA FALSE 0.009 125.000 0.028 1.000 N NA
 6956985 6956986 VC0395_A1000 VC0395_A1002 lplA   FALSE 0.024 236.000 0.000 NA   NA
 6956988 6956989 VC0395_A1003 VC0395_A1004   cry2 FALSE 0.004 156.000 0.045 1.000 N NA
 6956989 6956990 VC0395_A1004 VC0395_A1005 cry2 sugE FALSE 0.006 146.000 0.045 1.000 N NA
 6956991 6956992 VC0395_A1006 VC0395_A1007   cheY-1 TRUE 0.986 8.000 0.290 1.000 Y NA
 6956992 6956993 VC0395_A1007 VC0395_A1008 cheY-1   TRUE 0.971 -7.000 0.500 NA   NA
 6956993 6956994 VC0395_A1008 VC0395_A1009   cheA-1 TRUE 0.969 14.000 0.700 NA   NA
 6956994 6956995 VC0395_A1009 VC0395_A1010 cheA-1 cheY-2 TRUE 0.988 -3.000 0.450 1.000 Y NA
 6956995 6956996 VC0395_A1010 VC0395_A1011 cheY-2 cheR-1 TRUE 0.986 -3.000 0.370 1.000 Y NA
 6956996 6956997 VC0395_A1011 VC0395_A1012 cheR-1   TRUE 0.928 11.000 0.185 1.000   NA
 6956997 6956998 VC0395_A1012 VC0395_A1013   cheB-1 TRUE 0.881 -13.000 0.161 1.000   NA
 6956998 6956999 VC0395_A1013 VC0395_A1014 cheB-1   TRUE 0.977 21.000 0.316 0.020 Y NA
 6956999 6957000 VC0395_A1014 VC0395_A1015     TRUE 0.979 13.000 0.123 0.020 Y NA
 6957001 6957002 VC0395_A1016 VC0395_A1017     TRUE 0.911 79.000 0.333 0.020 Y NA
 6957002 6957003 VC0395_A1017 VC0395_A1018   rhlE-1 FALSE 0.002 182.000 0.068 1.000 N NA
 6957005 6957006 VC0395_A1020 VC0395_A1021   vceA TRUE 0.984 14.000 0.833 0.098 N NA
 6957006 6957007 VC0395_A1021 VC0395_A1022 vceA vceB TRUE 0.985 10.000 0.750 1.000   NA
 6957008 6957009 VC0395_A1023 VC0395_A1024     FALSE 0.012 222.000 0.000 1.000 N NA
 6957010 6957011 VC0395_A1025 VC0395_A1026 hcp-2 vgrG-1 FALSE 0.202 128.000 0.000 NA   NA
 6957011 6957012 VC0395_A1026 VC0395_A1027 vgrG-1   FALSE 0.355 135.000 0.200 NA   NA
 6957012 6957013 VC0395_A1027 VC0395_A1028     TRUE 0.971 3.000 0.267 NA   NA
 6957013 6957014 VC0395_A1028 VC0395_A1029     TRUE 0.964 -3.000 0.308 NA   NA
 6957014 6957015 VC0395_A1029 VC0395_A1030     FALSE 0.537 145.000 0.500 NA   NA
 6957015 6957016 VC0395_A1030 VC0395_A1031     FALSE 0.376 88.000 0.147 NA   NA
 6957018 6957019 VC0395_A1033 VC0395_A1034     TRUE 0.964 17.000 0.867 NA   NA
 6957020 6957021 VC0395_A1035 VC0395_A1036 potD-1 potD-2 TRUE 0.917 111.000 0.375 0.011 Y NA
 6957021 6957022 VC0395_A1036 VC0395_A1037 potD-2 potC TRUE 0.840 34.000 0.047 0.040 Y NA
 6957022 6957023 VC0395_A1037 VC0395_A1038 potC potB TRUE 0.995 0.000 0.286 0.040 Y NA
 6957023 6957024 VC0395_A1038 VC0395_A1039 potB potA TRUE 0.987 -19.000 0.789 1.000 Y NA