MicrobesOnline Operon Predictions for Legionella pneumophila str. Paris

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 753330 753331 lpp0001 lpp0002 dnaA dnaN TRUE 0.995 14.000 0.328 1.000 Y NA
 753331 753332 lpp0002 lpp0003 dnaN recF TRUE 0.999 -3.000 0.318 1.000 Y NA
 753332 753333 lpp0003 lpp0004 recF gyrB FALSE 0.350 297.000 0.249 0.005 Y NA
 753334 753335 lpp0005 lpp0006   speA TRUE 0.995 3.000 0.012 1.000 Y NA
 753335 753336 lpp0006 lpp0007 speA   TRUE 0.905 20.000 0.006 1.000   NA
 753336 753337 lpp0007 lpp0008     FALSE 0.002 541.000 0.000 NA   NA
 753338 753339 lpp0009 lpp0010     TRUE 0.785 28.000 0.002 1.000   NA
 753340 753341 lpp0011 lpp0012     FALSE 0.056 167.000 0.000 NA   NA
 753342 753343 lpp0013 lpp0014     FALSE 0.002 533.000 0.000 NA   NA
 753343 753344 lpp0014 lpp0015     FALSE 0.142 102.000 0.000 1.000   NA
 753344 753345 lpp0015 lpp0016     TRUE 0.645 -25.000 0.000 NA   NA
 753345 753346 lpp0016 lpp0017     TRUE 0.745 -15.000 0.000 NA   NA
 753346 753347 lpp0017 lpp0018     TRUE 0.733 -16.000 0.000 NA   NA
 753347 753348 lpp0018 lpp0019     FALSE 0.035 235.000 0.000 1.000 N NA
 753348 753349 lpp0019 lpp0020     FALSE 0.020 221.000 0.000 NA   NA
 753349 753350 lpp0020 lpp0021     FALSE 0.176 191.000 0.010 NA   NA
 753350 753351 lpp0021 lpp0022     TRUE 0.920 -3.000 0.000 NA   NA
 753352 753353 lpp0023 lpp0024   hbp FALSE 0.074 147.000 0.000 NA   NA
 753353 753354 lpp0024 lpp0025 hbp rcp FALSE 0.078 140.000 0.000 NA   NA
 753356 753357 lpp0027 lpp0028     TRUE 0.949 17.000 0.008 1.000 N NA
 753359 753360 lpp0030 lpp0031     FALSE 0.225 59.000 0.000 NA   NA
 753360 753361 lpp0031 lpp0032     FALSE 0.210 62.000 0.000 NA   NA
 753362 753363 lpp0033 lpp0034     FALSE 0.012 257.000 0.000 NA   NA
 753364 753365 lpp0035 lpp0036     FALSE 0.023 214.000 0.000 NA   NA
 753365 753366 lpp0036 lpp0037     FALSE 0.063 161.000 0.000 NA   NA
 753367 753368 lpp0038 lpp0039     TRUE 0.584 26.000 0.000 1.000   NA
 753368 753369 lpp0039 lpp0040     FALSE 0.010 270.000 0.000 NA   NA
 753372 753373 lpp0043 lpp0044     FALSE 0.044 178.000 0.000 NA   NA
 753376 753377 lpp0047 lpp0048     FALSE 0.030 199.000 0.000 NA   NA
 753377 753378 lpp0048 lpp0049     TRUE 0.938 -3.000 0.000 1.000   NA
 753378 753379 lpp0049 lpp0050     FALSE 0.316 53.000 0.000 1.000   NA
 753379 753380 lpp0050 lpp0051     FALSE 0.148 82.000 0.000 NA   NA
 753381 753382 lpp0052 lpp0053     FALSE 0.075 145.000 0.000 NA   NA
 753382 753383 lpp0053 lpp0054     FALSE 0.024 213.000 0.000 NA   NA
 753383 753384 lpp0054 lpp0055     FALSE 0.007 309.000 0.000 NA   NA
 753384 753385 lpp0055 lpp0056     TRUE 0.868 -7.000 0.000 NA   NA
 753386 753387 lpp0057 lpp0058     FALSE 0.096 145.000 0.000 1.000   NA
 753387 753388 lpp0058 lpp0059     FALSE 0.377 36.000 0.000 NA   NA
 753390 753391 lpp0061 lpp0062     FALSE 0.030 199.000 0.000 NA   NA
 753391 753392 lpp0062 lpp0063     FALSE 0.098 120.000 0.000 NA   NA
 753393 753394 lpp0064 lpp0065 hipA hipB TRUE 0.996 -6.000 0.675 NA   NA
 753395 753396 lpp0066 lpp0067     FALSE 0.003 434.000 0.000 NA   NA
 753397 753398 lpp0068 lpp0069     FALSE 0.006 329.000 0.000 NA   NA
 753399 753400 lpp0070 lpp0071     FALSE 0.336 39.000 0.000 NA   NA
 753400 753401 lpp0071 lpp0072     FALSE 0.019 226.000 0.000 NA   NA
 753401 753402 lpp0072 lpp0073     FALSE 0.144 84.000 0.000 NA   NA
 753402 753403 lpp0073 lpp0074     TRUE 0.920 -3.000 0.000 NA   NA
 753403 753404 lpp0074 lpp0075     FALSE 0.040 182.000 0.000 NA   NA
 753404 753405 lpp0075 lpp0076     FALSE 0.007 306.000 0.000 NA   NA
 753405 753406 lpp0076 lpp0077     FALSE 0.092 126.000 0.000 NA   NA
 753406 753407 lpp0077 lpp0078     TRUE 0.997 -7.000 1.000 NA N NA
 753407 753408 lpp0078 lpp0079     TRUE 0.999 -3.000 1.000 0.097 Y NA
 753409 753410 lpp0080 lpp0081     FALSE 0.283 49.000 0.000 NA   NA
 753410 753411 lpp0081 lpp0082     TRUE 0.866 8.000 0.000 NA   NA
 753412 753413 lpp0083 lpp0084     TRUE 0.797 -12.000 0.000 NA   NA
 753414 753415 lppt01 lpp0085 tRNA-Asn   FALSE 0.220 60.000 0.000 NA   NA
 753416 753417 lpp0086 lpp0087 uvrB   FALSE 0.010 355.000 0.000 1.000 N NA
 753418 753419 lpp0088 lpp0089     FALSE 0.436 78.000 0.003 NA   NA
 753420 753421 lpp0090 lpp0091   pepP TRUE 0.749 104.000 0.329 NA   NA
 753421 753422 lpp0091 lpp0092 pepP ubiH TRUE 0.994 -10.000 0.396 1.000 N NA
 753422 753423 lpp0092 lpp0093 ubiH   TRUE 0.999 -3.000 0.474 0.001 Y NA
 753423 753424 lpp0093 lpp0094     FALSE 0.047 176.000 0.000 NA   NA
 753427 753428 lpp0097 lpp0098     TRUE 0.998 -3.000 0.923 NA   NA
 753428 753429 lpp0098 lpp0099     TRUE 0.974 -10.000 0.026 NA   NA
 753431 753432 lpp0101 lpp0102     FALSE 0.018 227.000 0.000 NA   NA
 753432 753433 lpp0102 lpp0103     FALSE 0.128 91.000 0.000 NA   NA
 753434 753435 lpp0104 lpp0105     FALSE 0.020 221.000 0.000 NA   NA
 753435 753436 lpp0105 lpp0106   rnr/lidP FALSE 0.004 396.000 0.000 NA   NA
 753436 753437 lpp0106 lpp0107 rnr/lidP   TRUE 0.994 -7.000 0.147 0.024 N NA
 753437 753438 lpp0107 lpp0108     TRUE 0.977 -7.000 0.004 1.000 N NA
 753438 753439 lpp0108 lpp0109     FALSE 0.503 64.000 0.003 NA   NA
 753439 753440 lpp0109 lpp0110     FALSE 0.004 384.000 0.000 NA   NA
 753440 753441 lpp0110 lpp0111     FALSE 0.057 166.000 0.000 NA   NA
 753441 753442 lpp0111 lpp0112     FALSE 0.102 115.000 0.000 NA   NA
 753443 753444 lpp0113 lpp0114 polA lpxD TRUE 0.981 3.000 0.002 1.000 N NA
 753446 753447 lpp0116 lpp0117 fabF   FALSE 0.118 125.000 0.000 1.000   NA
 753447 753448 lpp0117 lpp0118     FALSE 0.126 119.000 0.000 1.000   NA
 753448 753449 lpp0118 lpp0119     FALSE 0.208 108.000 0.000 1.000 N NA
 753449 753450 lpp0119 lpp0120     FALSE 0.013 323.000 0.000 0.096   NA
 753450 753451 lpp0120 lpp0121     TRUE 0.663 18.000 0.000 NA   NA
 753451 753452 lpp0121 lpp0122     FALSE 0.116 99.000 0.000 NA   NA
 753453 753454 lpp0123 lpp0124     TRUE 0.939 0.000 0.000 1.000   NA
 753455 753456 lpp0125 lpp0126     FALSE 0.006 318.000 0.000 NA   NA
 753456 753457 lpp0126 lpp0127     FALSE 0.016 237.000 0.000 NA   NA
 753457 753458 lpp0127 lpp0128   gcsB FALSE 0.026 241.000 0.000 NA N NA
 753458 753459 lpp0128 lpp0129 gcsB   TRUE 0.968 -6.000 0.002 NA   NA
 753459 753460 lpp0129 lpp0130   gcsA TRUE 0.978 0.000 0.002 NA   NA
 753460 753461 lpp0130 lpp0131 gcsA gcvH TRUE 0.998 3.000 0.249 1.000 Y NA
 753461 753462 lpp0131 lpp0132 gcvH gcvT TRUE 0.982 34.000 0.317 0.002 Y NA
 753465 753466 lpp0135 lpp0136     TRUE 0.998 8.000 1.000 1.000 Y NA
 753467 753468 lpp0137 lpp0138 dsbA   TRUE 0.976 11.000 0.020 1.000   NA
 753469 753470 lpp0139 lpp0140     FALSE 0.131 114.000 0.000 1.000   NA
 753471 753472 lpp0141 lpp0142 acsB   TRUE 0.988 -73.000 0.500 1.000 Y NA
 753472 753473 lpp0142 lpp0143     TRUE 0.962 24.000 0.043 0.001 N NA
 753473 753474 lpp0143 lpp0144     FALSE 0.106 111.000 0.000 NA   NA
 753476 753477 lpp0146 lpp0147 dapB   FALSE 0.132 180.000 0.002 NA   NA
 753478 753479 lpp0148 lpp0149     TRUE 0.917 1.000 0.000 NA   NA
 753480 753481 lpp0150 lpp0151 sdhB   FALSE 0.126 92.000 0.000 NA   NA
 753481 753482 lpp0151 lpp0152   pgk TRUE 0.978 -16.000 0.002 0.005 Y NA
 753482 753483 lpp0152 lpp0153 pgk gap TRUE 0.993 11.000 0.017 0.005 Y NA
 753483 753484 lpp0153 lpp0154 gap tkt TRUE 0.798 81.000 0.022 1.000 Y NA
 753485 753486 lpp0155 lpp0156   prlC TRUE 0.621 64.000 0.012 NA   NA
 753486 753487 lpp0156 lpptmRNA1 prlC   FALSE 0.072 150.000 0.000 NA   NA
 753487 753488 lpptmRNA1 lpp0158     FALSE 0.019 226.000 0.000 NA   NA
 753488 753489 lpp0158 lpp0159     TRUE 0.505 -186.000 0.000 NA   NA
 753489 753490 lpp0159 lpp0160     FALSE 0.065 159.000 0.000 NA   NA
 753490 753491 lpp0160 lpp0161     TRUE 0.995 -3.000 0.158 NA   NA
 753491 753492 lpp0161 lpp0162     TRUE 0.989 7.000 0.115 NA   NA
 753492 753493 lpp0162 lpp0163     TRUE 0.985 -19.000 0.351 1.000   NA
 753493 753494 lpp0163 lpp0164     FALSE 0.002 2967.000 0.000 NA   NA
 753496 753497 lpp0166 lpp0167 lvrA lvrB TRUE 0.979 -58.000 1.000 NA   NA
 753497 753498 lpp0167 lpp0168 lvrB lvrC TRUE 0.987 13.000 0.250 NA   NA
 753498 753499 lpp0168 lpp0169 lvrC lvhB2 TRUE 0.920 -3.000 0.000 NA   NA
 753499 753500 lpp0169 lpp0170 lvhB2 lvhB3 TRUE 0.847 10.000 0.000 NA   NA
 753500 753501 lpp0170 lpp0171 lvhB3 lvhB4 TRUE 0.948 -13.000 0.000 NA Y NA
 753501 753502 lpp0171 lpp0172 lvhB4 lvhB5 TRUE 0.920 -3.000 0.000 NA   NA
 753502 753503 lpp0172 lpp0173 lvhB5 lvhB7 TRUE 0.736 15.000 0.000 NA   NA
 753503 753504 lpp0173 lpp0174 lvhB7 lvrD TRUE 0.920 -3.000 0.000 NA   NA
 753504 753505 lpp0174 lpp0175 lvrD lvhB6 TRUE 0.896 4.000 0.000 NA   NA
 753505 753506 lpp0175 lpp0176 lvhB6 lvhB8 TRUE 0.984 -3.000 0.000 NA Y NA
 753506 753507 lpp0176 lpp0177 lvhB8 lvhB9 TRUE 0.984 -3.000 0.000 NA Y NA
 753507 753508 lpp0177 lpp0178 lvhB9 lvhB10 TRUE 0.984 -3.000 0.000 NA Y NA
 753508 753509 lpp0178 lpp0179 lvhB10 lvhB11 TRUE 0.985 2.000 0.000 1.000 Y NA
 753509 753510 lpp0179 lpp0180 lvhB11 lvhD4 TRUE 0.998 -7.000 0.405 1.000 Y NA
 753510 753511 lpp0180 lpp0181 lvhD4 lvrE FALSE 0.118 98.000 0.000 NA   NA
 753511 753512 lpp0181 lpp0182 lvrE   FALSE 0.014 246.000 0.000 NA   NA
 753514 753515 lpp0184 lpp0185     TRUE 0.772 -13.000 0.000 NA   NA
 753515 753516 lpp0185 lpp0186     FALSE 0.123 94.000 0.000 NA   NA
 753516 753517 lpp0186 lpp0187     TRUE 0.993 4.000 0.182 NA   NA
 753518 753519 lpp0188 lpp0189     TRUE 0.868 -7.000 0.000 NA   NA
 753519 753520 lpp0189 lpp0190     TRUE 0.868 -7.000 0.000 NA   NA
 753520 753521 lpp0190 lpp0191     TRUE 0.691 17.000 0.000 NA   NA
 753522 753523 lpp0192 lpp0193     FALSE 0.427 31.000 0.000 NA   NA
 753523 753524 lpp0193 lpp0194     TRUE 0.555 -51.000 0.000 NA   NA
 753524 753525 lpp0194 lpp0195     FALSE 0.032 227.000 0.000 NA N NA
 753525 753526 lpp0195 lpp0196     TRUE 0.985 -13.000 0.216 NA   NA
 753526 753527 lpp0196 lpp0197     FALSE 0.006 331.000 0.000 NA   NA
 753527 753528 lpp0197 lpp0198     TRUE 0.962 -3.000 0.000 0.055   NA
 753528 753529 lpp0198 lpp0199     FALSE 0.099 175.000 0.000 0.055   NA
 753529 753530 lpp0199 lpp0200     TRUE 0.597 -39.000 0.000 NA   NA
 753530 753531 lpp0200 lpp0201     TRUE 0.889 -6.000 0.000 NA   NA
 753531 753532 lpp0201 lpp0202     FALSE 0.034 191.000 0.000 NA   NA
 753532 753533 lpp0202 lpp0203     FALSE 0.018 228.000 0.000 NA   NA
 753534 753535 lpp0204 lpp0205     FALSE 0.006 324.000 0.000 NA   NA
 753535 753536 lpp0205 lpp0206     FALSE 0.157 79.000 0.000 NA   NA
 753537 753538 lpp0207 lpp0208     FALSE 0.014 292.000 0.000 NA N NA
 753538 753539 lpp0208 lpp0209     FALSE 0.007 300.000 0.000 NA   NA
 753539 753540 lpp0209 lpp0210     FALSE 0.008 297.000 0.000 NA   NA
 753540 753541 lpp0210 lpp0211     TRUE 0.840 -9.000 0.000 NA   NA
 753541 753542 lpp0211 lpp0212     FALSE 0.120 97.000 0.000 NA   NA
 753542 753543 lpp0212 lpp0213     FALSE 0.106 111.000 0.000 NA   NA
 753543 753544 lpp0213 lpp0214     FALSE 0.318 41.000 0.000 NA   NA
 753545 753546 lpp0215 lpp0216     FALSE 0.022 217.000 0.000 NA   NA
 753547 753548 lpp0217 lpp0218     FALSE 0.011 261.000 0.000 NA   NA
 753549 753550 lpp0219 lpp0220     TRUE 0.809 30.000 0.000 NA Y NA
 753550 753551 lpp0220 lpp0221     FALSE 0.168 115.000 0.000 NA N NA
 753551 753552 lpp0221 lpp0222     TRUE 0.707 -19.000 0.000 NA   NA
 753552 753553 lpp0222 lpp0223     FALSE 0.045 177.000 0.000 NA   NA
 753557 753558 lpp0227 lpp0228     FALSE 0.055 168.000 0.000 NA   NA
 753558 753559 lpp0228 lpp0229     FALSE 0.010 267.000 0.000 NA   NA
 753559 753560 lpp0229 lpp0230     FALSE 0.113 101.000 0.000 NA   NA
 753560 753561 lpp0230 lpp0231     TRUE 0.993 -3.000 0.091 NA   NA
 753561 753562 lpp0231 lpp0232     TRUE 0.885 68.000 0.667 NA   NA
 753562 753563 lpp0232 lpp0233     FALSE 0.010 266.000 0.000 NA   NA
 753566 753567 lpp0236 lpp0237     TRUE 0.997 -10.000 0.630 NA Y NA
 753567 753568 lpp0237 lpp0238     TRUE 0.998 -3.000 0.414 0.046 N NA
 753568 753569 lpp0238 lpp0239     TRUE 0.961 -3.000 0.000 1.000 N NA
 753569 753570 lpp0239 lpp0240     TRUE 0.938 -3.000 0.000 1.000   NA
 753572 753573 lpp0242 lpp0243     FALSE 0.110 105.000 0.000 NA   NA
 753577 753578 lpp0247 lpp0248     FALSE 0.015 260.000 0.000 1.000   NA
 753578 753579 lpp0248 lpp0249     FALSE 0.177 127.000 0.000 1.000 N NA
 753582 753583 lpp0252 lpp0253 katG   FALSE 0.098 120.000 0.000 NA   NA
 753583 753584 lpp0253 lpp0254     FALSE 0.008 287.000 0.000 NA   NA
 753585 753586 lpp0255 lpp0256     FALSE 0.013 252.000 0.000 NA   NA
 753586 753587 lpp0256 lpp0257     FALSE 0.003 415.000 0.000 NA   NA
 753587 753588 lpp0257 lpp0258     FALSE 0.005 378.000 0.000 1.000   NA
 753588 753589 lpp0258 lpp0259   qxtA FALSE 0.133 113.000 0.000 1.000   NA
 753589 753590 lpp0259 lpp0260 qxtA qxtB TRUE 0.997 0.000 0.027 0.046 Y NA
 753591 753592 lpp0261 lpp0262     TRUE 0.994 -3.000 0.113 NA   NA
 753592 753593 lpp0262 lpp0263     TRUE 0.820 -10.000 0.000 NA   NA
 753594 753595 lpp0264 lpp0265a     TRUE 0.691 17.000 0.000 NA   NA
 753595 753596 lpp0265a lpp0265b     TRUE 0.707 -19.000 0.000 NA   NA
 753598 753599 lpp0267 lpp0268     TRUE 0.640 19.000 0.000 NA   NA
 753599 753600 lpp0268 lpp0269     FALSE 0.154 80.000 0.000 NA   NA
 753601 753602 lpp0270 lpp0271     TRUE 0.692 61.000 0.008 1.000 N NA
 753602 753603 lpp0271 lpp0272     FALSE 0.231 95.000 0.000 1.000 N NA
 753603 753604 lpp0272 lpp0273     TRUE 0.988 -22.000 0.840 1.000   NA
 753605 753606 lpp0274 lpp0275     FALSE 0.198 123.000 0.000 0.027   NA
 753607 753608 lpp0276 lpp0277 purK purE TRUE 0.998 -3.000 0.136 0.001 Y NA
 753608 753609 lpp0277 lpp0278 purE   FALSE 0.220 60.000 0.000 NA   NA
 753609 753610 lpp0278 lpp0279     TRUE 0.925 25.000 0.050 NA   NA
 753610 753611 lpp0279 lpp0280     TRUE 0.991 14.000 0.667 NA   NA
 753611 753612 lpp0280 lpp0281     TRUE 0.970 15.000 0.071 NA   NA
 753613 753614 lpp0282 lpp0283     TRUE 0.832 42.000 0.021 1.000 N NA
 753614 753615 lpp0283 lpp0284     TRUE 0.999 -3.000 0.351 1.000 Y NA
 753615 753616 lpp0284 lpp0285     TRUE 0.998 -3.000 0.714 1.000 N NA
 753616 753617 lpp0285 lpp0286     FALSE 0.039 183.000 0.000 NA   NA
 753618 753619 lpp0287 lpp0288     FALSE 0.094 148.000 0.000 1.000   NA
 753620 753621 lpp0289 lpp0290     TRUE 0.537 -70.000 0.000 NA   NA
 753621 753622 lpp0290 lpp0291     FALSE 0.002 620.000 0.000 NA   NA
 753622 753623 lpp0291 lpp0292     FALSE 0.234 93.000 0.000 1.000 N NA
 753625 753626 lpp0294 lpp0295 cyoA cyoB TRUE 0.998 3.000 0.200 0.009 Y NA
 753626 753627 lpp0295 lpp0296 cyoB cyoC TRUE 0.999 0.000 0.267 0.046 Y NA
 753627 753628 lpp0296 lpp0297 cyoC cyoD TRUE 0.999 2.000 0.400 0.046 Y NA
 753629 753630 lpp0298 lpp0299     FALSE 0.014 243.000 0.000 NA   NA
 753630 753631 lpp0299 lpp0300     TRUE 0.886 5.000 0.000 NA   NA
 753631 753632 lpp0300 lpp0301     FALSE 0.074 146.000 0.000 NA   NA
 753633 753634 lpp0302 lpp0303     FALSE 0.009 309.000 0.000 1.000   NA
 753635 753636 lpp0304 lpp0305 sidE   FALSE 0.003 418.000 0.000 NA   NA
 753636 753637 lpp0305 lpp0306     FALSE 0.122 95.000 0.000 NA   NA
 753638 753639 lpp0307 lpp0308     TRUE 0.746 17.000 0.000 1.000   NA
 753639 753640 lpp0308 lpp0309   gabT TRUE 0.990 -25.000 1.000 1.000 N NA
 753640 753641 lpp0309 lpp0310 gabT   FALSE 0.134 89.000 0.000 NA   NA
 753641 753642 lpp0310 lpp0311     FALSE 0.010 264.000 0.000 NA   NA
 753642 753643 lpp0311 lpp0312     FALSE 0.183 124.000 0.000 1.000 N NA
 753644 753645 lpp0313 lpp0314     FALSE 0.018 330.000 0.000 0.038 N NA
 753645 753646 lpp0314 lpp0315     FALSE 0.394 52.000 0.000 NA N NA
 753647 753648 lpp0316 lpp0317     FALSE 0.015 241.000 0.000 NA   NA
 753648 753649 lpp0317 lpp0318     FALSE 0.064 160.000 0.000 NA   NA
 753650 753651 lpp0319 lpp0320   rhlE FALSE 0.192 119.000 0.000 1.000 N NA
 753652 753653 lpp0321 lpp0322     FALSE 0.047 176.000 0.000 NA   NA
 753653 753654 lpp0322 lpp0323     FALSE 0.351 38.000 0.000 NA   NA
 753654 753655 lpp0323 lpp0324     FALSE 0.083 134.000 0.000 NA   NA
 753655 753656 lpp0324 lpp0325     FALSE 0.068 155.000 0.000 NA   NA
 753656 753657 lpp0325 lpp0326     TRUE 0.820 -10.000 0.000 NA   NA
 753657 753658 lpp0326 lpp0327     TRUE 0.738 57.000 0.036 NA   NA
 753658 753659 lpp0327 lpp0328     FALSE 0.058 177.000 0.000 1.000   NA
 753659 753660 lpp0328 lpp0329     TRUE 0.640 19.000 0.000 NA   NA
 753660 753661 lpp0329 lpp0330     FALSE 0.004 363.000 0.000 NA   NA
 753661 753662 lpp0330 lpp0331     TRUE 0.584 26.000 0.000 1.000   NA
 753662 753663 lpp0331 lpp0332     FALSE 0.030 200.000 0.000 NA   NA
 753665 753666 lpp0334 lpp0335     FALSE 0.098 121.000 0.000 NA   NA
 753667 753668 lpp0336 lpp0337     FALSE 0.295 47.000 0.000 NA   NA
 753673 753674 lpp0342 lpp0343     FALSE 0.104 135.000 0.000 1.000   NA
 753674 753675 lpp0343 lpp0344   pncB FALSE 0.188 81.000 0.000 1.000   NA
 753675 753676 lpp0344 lpp0345 pncB pncA TRUE 0.988 5.000 0.020 1.000 N NA
 753677 753678 lpp0346 lpp0347     TRUE 0.921 0.000 0.000 NA   NA
 753679 753680 lpp0348 lpp0349   sdbA FALSE 0.004 412.000 0.000 NA   NA
 753680 753681 lpp0349 lpp0350 sdbA   FALSE 0.154 80.000 0.000 NA   NA
 753682 753683 lpp0351 lpp0352     TRUE 0.753 37.000 0.000 NA Y NA
 753683 753684 lpp0352 lpp0353     TRUE 0.927 3.000 0.000 1.000   NA
 753684 753685 lpp0353 lpp0354     TRUE 0.933 23.000 0.048 NA   NA
 753685 753686 lpp0354 lpp0355     FALSE 0.049 173.000 0.000 NA   NA
 753688 753689 lpp0357 lpp0358     FALSE 0.230 68.000 0.000 1.000   NA
 753692 753693 lpp0361 lpp0362     FALSE 0.110 105.000 0.000 NA   NA
 753693 753694 lpp0362 lpp0363     FALSE 0.014 244.000 0.000 NA   NA
 753694 753695 lpp0363 lpp0364     FALSE 0.002 623.000 0.000 NA   NA
 753698 753699 lpp0367 lpp0368 ppk   FALSE 0.379 41.000 0.000 1.000   NA
 753699 753700 lpp0368 lpp0369     FALSE 0.205 76.000 0.000 1.000   NA
 753700 753701 lpp0369 lpp0370     TRUE 0.995 -3.000 0.182 NA   NA
 753702 753703 lpp0371 lpp0372     TRUE 0.735 114.000 0.333 NA   NA
 753704 753705 lpp0373 lpp0374     TRUE 0.997 -3.000 0.642 NA   NA
 753706 753707 lpp0375 lpp0376   surA FALSE 0.326 176.000 0.014 1.000 N NA
 753707 753708 lpp0376 lpp0377 surA pdxA TRUE 0.998 -3.000 0.561 1.000 N NA
 753708 753709 lpp0377 lpp0378 pdxA folA TRUE 0.994 2.000 0.005 1.000 Y NA
 753711 753712 lppr01 lppt02   tRNA-Ala FALSE 0.111 104.000 0.000 NA   NA
 753712 753713 lppt02 lppr02 tRNA-Ala   FALSE 0.056 167.000 0.000 NA   NA
 753713 753714 lppr02 lppr03     FALSE 0.020 221.000 0.000 NA   NA
 753714 753715 lppr03 lppt03   tRNA-Thr FALSE 0.118 98.000 0.000 NA   NA
 753715 753716 lppt03 lppt04 tRNA-Thr tRNA-Tyr FALSE 0.173 73.000 0.000 NA   NA
 753716 753717 lppt04 lppt05 tRNA-Tyr tRNA-Gly TRUE 0.607 21.000 0.000 NA   NA
 753717 753718 lppt05 lppt06 tRNA-Gly tRNA-Thr FALSE 0.261 53.000 0.000 NA   NA
 753718 753719 lppt06 lpp0380 tRNA-Thr tufA FALSE 0.390 35.000 0.000 NA   NA
 753719 753720 lpp0380 lppt07 tufA tRNA-Trp FALSE 0.210 62.000 0.000 NA   NA
 753720 753721 lppt07 lpp0381 tRNA-Trp secE TRUE 0.756 14.000 0.000 NA   NA
 753721 753722 lpp0381 lpp0382 secE nusG TRUE 0.954 3.000 0.000 1.000 N NA
 753722 753723 lpp0382 lpp0383 nusG rplK TRUE 0.848 110.000 0.681 1.000 N NA
 753723 753724 lpp0383 lpp0384 rplK rplA TRUE 0.998 10.000 0.838 0.024 Y NA
 753724 753725 lpp0384 lpp0385 rplA rplJ TRUE 0.791 173.000 0.302 0.024 Y NA
 753725 753726 lpp0385 lpp0386 rplJ rplL TRUE 0.989 31.000 0.884 0.018 Y NA
 753726 753727 lpp0386 lpp0387 rplL rpoB TRUE 0.755 92.000 0.223 1.000   NA
 753727 753728 lpp0387 lpp0388 rpoB rpoC TRUE 0.900 89.000 0.851 0.001   NA
 753728 753729 lpp0388 lpp0389 rpoC rpsL TRUE 0.693 114.000 0.122 1.000 N NA
 753729 753730 lpp0389 lpp0390 rpsL rpsG TRUE 0.994 21.000 0.620 0.003 Y NA
 753730 753731 lpp0390 lpp0391 rpsG fusA TRUE 0.995 15.000 0.579 1.000 Y NA
 753731 753732 lpp0391 lpp0392 fusA tufA TRUE 0.993 21.000 0.400 0.001 Y NA
 753732 753733 lpp0392 lpp0393 tufA rpsJ TRUE 0.998 6.000 0.318 1.000 Y NA
 753733 753734 lpp0393 lpp0394 rpsJ rplC TRUE 0.979 35.000 0.307 0.024 Y NA
 753734 753735 lpp0394 lpp0395 rplC rplD TRUE 0.999 0.000 0.486 0.018 Y NA
 753735 753736 lpp0395 lpp0396 rplD rplW TRUE 0.999 -3.000 0.513 0.018 Y NA
 753736 753737 lpp0396 lpp0397 rplW rplB TRUE 0.998 12.000 0.849 0.021 Y NA
 753737 753738 lpp0397 lpp0398 rplB rpsS TRUE 0.995 19.000 0.820 0.024 Y NA
 753738 753739 lpp0398 lpp0399 rpsS rplV TRUE 0.998 10.000 0.769 0.024 Y NA
 753739 753740 lpp0399 lpp0400 rplV rpsC TRUE 0.999 3.000 0.719 0.024 Y NA
 753740 753741 lpp0400 lpp0401 rpsC rplP TRUE 0.996 17.000 0.828 0.024 Y NA
 753741 753742 lpp0401 lpp0402 rplP rpmC TRUE 0.999 0.000 0.802 0.018 Y NA
 753742 753743 lpp0402 lpp0403 rpmC rpsQ TRUE 0.999 2.000 0.828 0.018 Y NA
 753743 753744 lpp0403 lpp0404 rpsQ rplN TRUE 0.946 89.000 0.791 0.024 Y NA
 753744 753745 lpp0404 lpp0405 rplN rplX TRUE 0.998 13.000 0.810 0.024 Y NA
 753745 753746 lpp0405 lpp0406 rplX rplE TRUE 0.997 16.000 0.758 0.018 Y NA
 753746 753747 lpp0406 lpp0407 rplE rpsN TRUE 0.997 13.000 0.496 0.018 Y NA
 753747 753748 lpp0407 lpp0408 rpsN rpsH TRUE 0.992 23.000 0.473 0.018 Y NA
 753748 753749 lpp0408 lpp0409 rpsH rplF TRUE 0.996 18.000 0.808 0.018 Y NA
 753749 753750 lpp0409 lpp0410 rplF rplR TRUE 0.998 11.000 0.815 0.018 Y NA
 753750 753751 lpp0410 lpp0411 rplR rpsE TRUE 0.998 10.000 0.814 0.024 Y NA
 753751 753752 lpp0411 lpp0412 rpsE rpmD TRUE 0.999 3.000 0.789 0.024 Y NA
 753752 753753 lpp0412 lpp0413 rpmD rplO TRUE 0.999 0.000 0.653 0.003 Y NA
 753753 753754 lpp0413 lpp0414 rplO secY TRUE 0.998 -3.000 0.730 1.000 N NA
 753754 753755 lpp0414 lpp0415 secY   TRUE 0.969 17.000 0.089 1.000   NA
 753755 753756 lpp0415 lpp0416   rpsM TRUE 0.829 78.000 0.194 0.018   NA
 753756 753757 lpp0416 lpp0417 rpsM rpsK TRUE 0.993 24.000 0.810 0.018 Y NA
 753757 753758 lpp0417 lpp0418 rpsK rpsD TRUE 0.995 17.000 0.509 0.024 Y NA
 753758 753759 lpp0418 lpp0419 rpsD rpoA TRUE 0.986 19.000 0.549 1.000 N NA
 753759 753760 lpp0419 lpp0420 rpoA rplQ TRUE 0.989 19.000 0.873 1.000 N NA
 753761 753762 lpp0421 lpp0422 ssb   TRUE 0.737 84.000 0.075 1.000 N NA
 753763 753764 lpp0423 lpp0424     TRUE 0.811 71.000 0.013 1.000 Y NA
 753764 753765 lpp0424 lpp0425     TRUE 0.995 0.000 0.013 NA Y NA
 753765 753766 lpp0425 lpp0426     TRUE 0.997 5.000 0.182 NA Y NA
 753766 753767 lpp0426 lpp0427     TRUE 0.999 1.000 0.333 0.016 Y NA
 753767 753768 lpp0427 lpp0428     TRUE 0.993 -7.000 0.167 1.000 N NA
 753769 753770 lpp0429 lpp0430     FALSE 0.047 176.000 0.000 NA   NA
 753770 753771 lpp0430 lpp0431   dapF FALSE 0.007 311.000 0.000 NA   NA
 753771 753772 lpp0431 lpp0432 dapF   TRUE 0.973 10.000 0.012 NA   NA
 753772 753773 lpp0432 lpp0433     FALSE 0.065 159.000 0.000 NA   NA
 753774 753775 lpp0434 lpp0435     TRUE 0.981 -3.000 0.004 NA   NA
 753775 753776 lpp0435 lpp0436     TRUE 0.974 -13.000 0.063 NA   NA
 753778 753779 lpp0438 lpp0439 fur   FALSE 0.079 138.000 0.000 NA   NA
 753779 753780 lpp0439 lpp0440     FALSE 0.076 143.000 0.000 NA   NA
 753783 753784 lpp0443 lpp0444 sdhA   FALSE 0.076 163.000 0.000 1.000   NA
 753784 753785 lpp0444 lpp0445     TRUE 0.759 -19.000 0.000 1.000   NA
 753785 753786 lpp0445 lpp0446     TRUE 0.976 -13.000 0.059 1.000   NA
 753786 753787 lpp0446 lpp0447     TRUE 0.991 4.000 0.108 NA   NA
 753787 753788 lpp0447 lpp0448     FALSE 0.032 195.000 0.000 NA   NA
 753788 753789 lpp0448 lpp0449     TRUE 0.920 -3.000 0.000 NA   NA
 753789 753790 lpp0449 lpp0450     FALSE 0.011 259.000 0.000 NA   NA
 753791 753792 lpp0451 lpp0452 uvrA   FALSE 0.039 183.000 0.000 NA   NA
 753792 753793 lpp0452 lpp0453     TRUE 0.991 11.000 0.307 NA   NA
 753794 753795 lpp0454 lpp0455     TRUE 0.996 -10.000 0.688 0.097 N NA
 753795 753796 lpp0455 lpp0456     FALSE 0.148 82.000 0.000 NA   NA
 753796 753797 lpp0456 lpp0457     FALSE 0.288 48.000 0.000 NA   NA
 753797 753798 lpp0457 lpp0458     FALSE 0.105 112.000 0.000 NA   NA
 753798 753799 lpp0458 lpp0459     TRUE 0.575 86.000 0.019 1.000   NA
 753799 753800 lpp0459 lpp0460     FALSE 0.218 187.000 0.019 NA   NA
 753802 753803 lpp0462 lpp0463   rplS TRUE 0.987 4.000 0.011 1.000 N NA
 753803 753804 lpp0463 lpp0464 rplS trmD TRUE 0.987 27.000 0.567 1.000 Y NA
 753804 753805 lpp0464 lpp0465 trmD rimM TRUE 0.999 0.000 0.672 1.000 Y NA
 753805 753806 lpp0465 lpp0466 rimM rpsP TRUE 0.998 6.000 0.342 0.018 Y NA
 753806 753807 lpp0466 lpp0467 rpsP ffh TRUE 0.845 87.000 0.361 1.000 N NA
 753807 753808 lpp0467 lpp0468 ffh   FALSE 0.012 257.000 0.000 NA   NA
 753809 753810 lpp0469 lpp0470     FALSE 0.005 337.000 0.000 NA   NA
 753810 753811 lpp0470 lpp0471     TRUE 0.993 -10.000 0.500 NA   NA
 753811 753812 lpp0471 lpp0472     FALSE 0.266 204.000 0.087 NA   NA
 753813 753814 lpp0473 lpp0474   lidJ TRUE 0.640 19.000 0.000 NA   NA
 753814 753815 lpp0474 lpp0475 lidJ   FALSE 0.003 417.000 0.000 NA   NA
 753816 753817 lpp0476 lpp0477     TRUE 0.990 -16.000 0.722 NA   NA
 753817 753818 lpp0477 lpp0478     TRUE 0.994 5.000 0.255 NA   NA
 753818 753819 lpp0478 lpp0479     TRUE 0.996 -10.000 0.321 1.000 Y NA
 753819 753820 lpp0479 lpp0480     TRUE 0.988 10.000 0.099 1.000   NA
 753820 753821 lpp0480 lpp0481     FALSE 0.006 366.000 0.000 1.000   NA
 753823 753824 lpp0483 lpp0484 zwf pgl TRUE 0.986 -31.000 0.163 1.000 Y NA
 753824 753825 lpp0484 lpp0485 pgl edd TRUE 0.995 -12.000 0.202 1.000 Y NA
 753825 753826 lpp0485 lpp0486 edd glk TRUE 0.972 -25.000 0.012 1.000 Y NA
 753826 753827 lpp0486 lpp0487 glk eda TRUE 0.985 -13.000 0.013 1.000 Y NA
 753827 753828 lpp0487 lpp0488 eda   TRUE 0.669 114.000 0.008 1.000 Y NA
 753829 753830 lpp0489 lpp0490     FALSE 0.070 168.000 0.000 1.000   NA
 753830 753831 lpp0490 lpp0491     TRUE 0.750 87.000 0.209 NA   NA
 753831 753832 lpp0491 lpp0492   hemZ FALSE 0.089 128.000 0.000 NA   NA
 753832 753833 lpp0492 lpp0493 hemZ cspD FALSE 0.432 111.000 0.004 1.000 N NA
 753836 753837 lpp0496 lpp0497     TRUE 0.717 140.000 0.286 1.000 N NA
 753837 753838 lpp0497 lpp0498     TRUE 0.988 -22.000 1.000 NA   NA
 753838 753839 lpp0498 lpp0499     TRUE 0.982 -33.000 0.667 NA   NA
 753839 753840 lpp0499 lpp0500     TRUE 0.594 22.000 0.000 NA   NA
 753846 753847 lpp0506 lpp0507   icmT FALSE 0.051 171.000 0.000 NA   NA
 753847 753848 lpp0507 lpp0508 icmT icmS TRUE 0.997 1.000 0.400 NA   NA
 753848 753849 lpp0508 lpp0509 icmS icmR FALSE 0.114 100.000 0.000 NA   NA
 753849 753850 lpp0509 lpp0510 icmR icmQ FALSE 0.128 91.000 0.000 NA   NA
 753850 753851 lpp0510 lpp0511 icmQ icmP/dotM TRUE 0.525 187.000 0.500 NA   NA
 753851 753852 lpp0511 lpp0512 icmP/dotM icmO/dotL TRUE 0.996 -3.000 0.308 NA   NA
 753852 753853 lpp0512 lpp0513 icmO/dotL lphA FALSE 0.005 404.000 0.000 1.000   NA
 753853 753854 lpp0513 lpp0514 lphA icmM/dotJ TRUE 0.993 12.000 0.667 NA   NA
 753854 753855 lpp0514 lpp0515 icmM/dotJ icmL/dotI TRUE 0.987 16.000 0.500 NA   NA
 753855 753856 lpp0515 lpp0516 icmL/dotI icmK/dotH TRUE 0.997 3.000 1.000 NA   NA
 753856 753857 lpp0516 lpp0517 icmK/dotH icmE/dotG TRUE 0.996 5.000 0.500 NA   NA
 753857 753858 lpp0517 lpp0518 icmE/dotG icmG/dotF TRUE 0.986 15.000 0.400 NA   NA
 753858 753859 lpp0518 lpp0519 icmG/dotF icmC/dotE TRUE 0.995 8.000 0.600 NA   NA
 753859 753860 lpp0519 lpp0520 icmC/dotE icmD TRUE 0.977 26.000 1.000 NA   NA
 753860 753861 lpp0520 lpp0521 icmD icmJ/dotN FALSE 0.459 198.000 0.429 NA   NA
 753861 753862 lpp0521 lpp0522 icmJ/dotN icmB/dotO TRUE 0.928 36.000 0.267 NA   NA
 753863 753864 lpp0523 lpp0524 citA/tphA icmF TRUE 0.906 3.000 0.000 NA   NA
 753864 753865 lpp0524 lpp0525 icmF dotU TRUE 0.997 0.000 0.667 NA   NA
 753865 753866 lpp0525 lpp0526 dotU purH FALSE 0.009 285.000 0.000 NA   NA
 753866 753867 lpp0526 lpp0527 purH prmA TRUE 0.840 27.000 0.002 1.000 N NA
 753867 753868 lpp0527 lpp0528 prmA accC TRUE 0.995 2.000 0.152 1.000 N NA
 753868 753869 lpp0528 lpp0529 accC accB TRUE 0.996 13.000 0.275 0.002 Y NA
 753869 753870 lpp0529 lpp0530 accB aroQ TRUE 0.989 14.000 0.254 1.000 N NA
 753871 753872 lpp0531 lpp0532 dcoA proA FALSE 0.005 566.000 0.000 1.000 N NA
 753875 753876 lpp0535 lpp0536     FALSE 0.411 150.000 0.010 1.000 N NA
 753880 753881 lpp0540 lpp0541     FALSE 0.279 191.000 0.033 NA N NA
 753881 753882 lpp0541 lpp0542   rpoN TRUE 0.978 27.000 0.820 NA N NA
 753882 753883 lpp0542 lpp0543 rpoN rpmG FALSE 0.055 208.000 0.000 1.000 N NA
 753883 753884 lpp0543 lpp0544 rpmG rpmB TRUE 0.995 15.000 0.332 0.018 Y NA
 753885 753886 lpp0545 lpp0546     TRUE 0.704 -25.000 0.000 1.000   NA
 753886 753887 lpp0546 lpp0547     FALSE 0.159 78.000 0.000 NA   NA
 753887 753888 lpp0547 lpp0548   hflK FALSE 0.026 209.000 0.000 NA   NA
 753888 753889 lpp0548 lpp0549 hflK hflC TRUE 0.999 3.000 0.947 0.013 Y NA
 753889 753890 lpp0549 lpp0550 hflC purA FALSE 0.486 135.000 0.019 1.000 N NA
 753890 753891 lpp0550 lpp0551 purA   FALSE 0.027 221.000 0.000 1.000   NA
 753893 753894 lpp0553 lpp0554     TRUE 0.989 -3.000 0.000 0.047 Y NA
 753894 753895 lpp0554 lpp0555     TRUE 0.984 -16.000 0.022 1.000 Y NA
 753895 753896 lpp0555 lpp0556   argG TRUE 0.994 -3.000 0.002 0.095 Y NA
 753896 753897 lpp0556 lpp0557 argG argH TRUE 0.997 -7.000 0.278 1.000 Y NA
 753897 753898 lpp0557 lpp0558 argH argF TRUE 0.992 3.000 0.003 1.000 Y NA
 753901 753902 lpp0561 lpp0562     TRUE 0.889 81.000 0.408 0.033 N NA
 753902 753903 lpp0562 lpp0563   gpmI TRUE 0.987 -13.000 0.170 1.000 N NA
 753903 753904 lpp0563 lpp0564 gpmI   FALSE 0.112 103.000 0.000 NA   NA
 753904 753905 lpp0564 lpp0565     FALSE 0.161 77.000 0.000 NA   NA
 753906 753907 lpp0566 lpp0567 uppS cdsA TRUE 0.988 11.000 0.007 1.000 Y NA
 753907 753908 lpp0567 lpp0568 cdsA ecfE TRUE 0.821 33.000 0.004 1.000 N NA
 753908 753909 lpp0568 lpp0569 ecfE   TRUE 0.718 171.000 0.204 1.000 Y NA
 753909 753910 lpp0569 lpp0570     TRUE 0.879 114.000 0.354 1.000 Y NA
 753910 753911 lpp0570 lpp0571   lpxD TRUE 0.996 14.000 0.814 1.000 Y NA
 753911 753912 lpp0571 lpp0572 lpxD fabZ TRUE 0.826 128.000 0.796 1.000 N NA
 753912 753913 lpp0572 lpp0573 fabZ lpxA TRUE 0.998 -3.000 0.850 1.000 N NA
 753913 753914 lpp0573 lpp0574 lpxA   TRUE 0.949 4.000 0.000 1.000 N NA
 753914 753915 lpp0574 lpp0575   serS TRUE 0.947 22.000 0.033 1.000 N NA
 753915 753916 lpp0575 lpp0576 serS   FALSE 0.055 168.000 0.000 NA   NA
 753916 753917 lpp0576 lpp0577     FALSE 0.051 171.000 0.000 NA   NA
 753917 753918 lpp0577 lpp0578     FALSE 0.005 340.000 0.000 NA   NA
 753918 753919 lpp0578 lpp0579     TRUE 0.911 36.000 0.182 NA   NA
 753920 753921 lpp0580 lpp0581     FALSE 0.003 439.000 0.000 NA   NA
 753921 753922 lpp0581 lpp0582     TRUE 0.772 -13.000 0.000 NA   NA
 753922 753923 lpp0582 lpp0583     FALSE 0.214 61.000 0.000 NA   NA
 753923 753924 lpp0583 lpp0584     TRUE 0.588 -40.000 0.000 NA   NA
 753924 753925 lpp0584 lpp0585     TRUE 0.610 -34.000 0.000 NA   NA
 753925 753926 lpp0585 lpp0586     TRUE 0.938 -3.000 0.000 1.000   NA
 753926 753927 lpp0586 lpp0587     TRUE 0.920 -3.000 0.000 NA   NA
 753927 753928 lpp0587 lpp0588     TRUE 0.920 -3.000 0.000 NA   NA
 753928 753929 lpp0588 lpp0589     TRUE 0.938 -3.000 0.000 1.000   NA
 753929 753930 lpp0589 lppt08   tRNA-Pro FALSE 0.420 32.000 0.000 NA   NA
 753932 753933 lpp0591 lpp0592     FALSE 0.072 150.000 0.000 NA   NA
 753934 753935 lpp0593 lpp0594 sdhC sdhD TRUE 0.999 -6.000 0.453 0.001 Y NA
 753935 753936 lpp0594 lpp0595 sdhD sdhA TRUE 0.999 2.000 0.705 0.002 Y NA
 753936 753937 lpp0595 lpp0596 sdhA sdhB TRUE 0.997 13.000 0.604 0.002 Y NA
 753937 753938 lpp0596 lpp0597 sdhB sucA TRUE 0.902 58.000 0.067 1.000 Y NA
 753938 753939 lpp0597 lpp0598 sucA sucB TRUE 0.981 36.000 0.667 1.000 Y NA
 753939 753940 lpp0598 lpp0599 sucB sucC TRUE 0.924 63.000 0.136 0.095 Y NA
 753940 753941 lpp0599 lpp0600 sucC sucD TRUE 0.963 75.000 0.806 0.001 Y NA
 753941 753942 lpp0600 lpp0601 sucD pdxH FALSE 0.007 423.000 0.000 1.000 N NA
 753942 753943 lpp0601 lpp0602 pdxH letE FALSE 0.002 613.000 0.000 NA   NA
 753945 753946 lpp0604 lpp0605     FALSE 0.018 228.000 0.000 NA   NA
 753946 753947 lpp0605 lpp0606     FALSE 0.184 190.000 0.011 NA   NA
 753948 753949 lpp0607 lppt09 prs tRNA-Gln FALSE 0.041 180.000 0.000 NA   NA
 753949 753950 lppt09 lpp0608 tRNA-Gln   FALSE 0.089 128.000 0.000 NA   NA
 753951 753952 lpp0609 lpp0610     TRUE 0.967 -10.000 0.004 1.000 N NA
 753953 753954 lpp0611 lpp0612     FALSE 0.053 209.000 0.000 1.000 N NA
 753954 753955 lpp0612 lpp0613   sugE FALSE 0.326 69.000 0.000 1.000 N NA
 753955 753956 lpp0613 lpp0614 sugE dinP FALSE 0.011 339.000 0.000 1.000 N NA
 753958 753959 lpp0615 lpp0616   mutM FALSE 0.169 75.000 0.000 NA   NA
 753959 753960 lpp0616 lpp0617 mutM   TRUE 0.979 0.000 0.003 NA   NA
 753963 753964 lpp0620 lpp0621     FALSE 0.293 179.000 0.000 0.001 Y NA
 753964 753965 lpp0621 lpp0622     FALSE 0.371 130.000 0.010 NA   NA
 753965 753966 lpp0622 lpp0623     FALSE 0.147 207.000 0.010 NA   NA
 753968 753969 lpp0625 lpp0626     TRUE 0.998 -3.000 0.655 0.001   NA
 753971 753972 lpp0628 lppr04 tyrS   FALSE 0.035 189.000 0.000 NA   NA
 753972 753973 lppr04 lppt11   tRNA-Ala FALSE 0.111 104.000 0.000 NA   NA
 753973 753974 lppt11 lppr05 tRNA-Ala   FALSE 0.056 167.000 0.000 NA   NA
 753974 753975 lppr05 lppr06     FALSE 0.020 221.000 0.000 NA   NA
 753976 753977 lpp0629 lpp0630   gor TRUE 0.979 7.000 0.011 1.000   NA
 753977 753978 lpp0630 lpp0631 gor add FALSE 0.037 231.000 0.000 1.000 N NA
 753980 753981 lpp0633 lpp0634     TRUE 0.995 10.000 0.937 NA   NA
 753982 753983 lpp0635 lpp0636     FALSE 0.007 302.000 0.000 NA   NA
 753983 753984 lpp0636 lpp0637     TRUE 0.994 -7.000 0.263 NA N NA
 753984 753985 lpp0637 lpp0638   pyrB TRUE 0.811 50.000 0.022 1.000 N NA
 753986 753987 lpp0639 lpp0640     FALSE 0.105 112.000 0.000 NA   NA
 753987 753988 lpp0640 lpp0641     TRUE 0.748 65.000 0.074 NA   NA
 753991 753992 lpp0644 lpp0645     TRUE 0.945 14.000 0.008 NA   NA
 753994 753995 lpp0647 lpp0648     TRUE 0.917 1.000 0.000 NA   NA
 753996 753997 lpp0649 lpp0650     FALSE 0.283 49.000 0.000 NA   NA
 753998 753999 lpp0651 lpp0652     TRUE 0.991 -7.000 0.078 1.000 N NA
 753999 754000 lpp0652 lpp0653     TRUE 0.999 2.000 0.466 1.000 Y NA
 754000 754001 lpp0653 lpp0654     TRUE 0.999 -3.000 0.482 1.000 Y NA
 754001 754002 lpp0654 lpp0655     TRUE 0.985 -10.000 0.049 1.000 N NA
 754002 754003 lpp0655 lpp0656     TRUE 0.994 -3.000 0.055 1.000 N NA
 754003 754004 lpp0656 lpp0657     TRUE 0.674 72.000 0.042 NA   NA
 754004 754005 lpp0657 lpp0658     TRUE 0.983 3.000 0.009 NA   NA
 754006 754007 lpp0659 lpp0660     FALSE 0.013 247.000 0.000 NA   NA
 754007 754008 lpp0660 lpp0661     TRUE 0.906 3.000 0.000 NA   NA
 754010 754011 lpp0663 lpp0664     FALSE 0.029 201.000 0.000 NA   NA
 754014 754015 lpp0667 lpp0668     TRUE 0.998 2.000 0.907 1.000   NA
 754017 754018 lpp0670 lpp0671     FALSE 0.004 393.000 0.000 NA   NA
 754021 754022 lpp0674 lpp0675   sidA FALSE 0.106 111.000 0.000 NA   NA
 754022 754023 lpp0675 lpp0676 sidA   FALSE 0.063 161.000 0.000 NA   NA
 754023 754024 lpp0676 lpp0677     FALSE 0.092 126.000 0.000 NA   NA
 754025 754026 lpp0678 lpp0679     FALSE 0.029 201.000 0.000 NA   NA
 754027 754028 lpp0680 lpp0681   pilE FALSE 0.159 78.000 0.000 NA   NA
 754028 754029 lpp0681 lpp0682 pilE   TRUE 0.991 12.000 0.058 NA Y NA
 754029 754030 lpp0682 lpp0683     TRUE 0.988 13.000 0.038 NA Y NA
 754030 754031 lpp0683 lpp0684     TRUE 0.998 -3.000 0.333 NA Y NA
 754031 754032 lpp0684 lpp0685     TRUE 0.997 -3.000 0.083 NA Y NA
 754032 754033 lpp0685 lpp0686     TRUE 0.990 13.000 0.056 NA Y NA
 754033 754034 lpp0686 lpp0687     FALSE 0.008 351.000 0.000 NA N NA
 754034 754035 lpp0687 lpp0688     TRUE 0.651 177.000 1.000 NA   NA
 754036 754037 lpp0689 lpp0690   tdk FALSE 0.070 191.000 0.000 1.000 N NA
 754037 754038 lpp0690 lpp0691 tdk   TRUE 0.728 48.000 0.004 1.000 N NA
 754038 754039 lpp0691 lpp0692     TRUE 0.998 13.000 1.000 0.036 Y NA
 754039 754040 lpp0692 lpp0693   deoB TRUE 0.996 -3.000 0.016 1.000 Y NA
 754040 754041 lpp0693 lpp0694 deoB hslV FALSE 0.058 204.000 0.000 1.000 N NA
 754041 754042 lpp0694 lpp0695 hslV hslU TRUE 0.999 2.000 0.752 1.000 Y NA
 754042 754043 lpp0695 lpp0696 hslU   FALSE 0.030 200.000 0.000 NA   NA
 754043 754044 lpp0696 lpp0697     FALSE 0.120 97.000 0.000 NA   NA
 754046 754047 lpp0699 lpp0700 rtxA-1 wrbA FALSE 0.055 179.000 0.000 1.000   NA
 754047 754048 lpp0700 lpp0701 wrbA   FALSE 0.003 494.000 0.000 1.000   NA
 754048 754049 lpp0701 lpp0702   exoA FALSE 0.413 56.000 0.000 0.051   NA
 754049 754050 lpp0702 lpp0703 exoA xthA TRUE 0.992 -7.000 0.003 0.001 Y NA
 754050 754051 lpp0703 lpp0704 xthA rpmE FALSE 0.157 137.000 0.000 1.000 N NA
 754051 754052 lpp0704 lpp0705 rpmE   FALSE 0.463 127.000 0.009 1.000 N NA
 754052 754053 lpp0705 lpp0706     FALSE 0.051 212.000 0.000 1.000 N NA
 754053 754054 lpp0706 lpp0707     TRUE 0.996 -19.000 0.500 0.036 Y NA
 754055 754056 lpp0708 lpp0709 dam   FALSE 0.104 171.000 0.000 1.000 N NA
 754056 754057 lpp0709 lpp0710     TRUE 0.792 201.000 1.000 0.006 Y NA
 754057 754058 lpp0710 lpp0711     TRUE 0.996 11.000 0.667 1.000 N NA
 754059 754060 lpp0712 lpp0713     FALSE 0.003 453.000 0.000 NA   NA
 754060 754061 lpp0713 lpp0714     TRUE 0.997 3.000 0.545 1.000   NA
 754061 754062 lpp0714 lpp0715     TRUE 0.988 18.000 0.547 0.093   NA
 754062 754063 lpp0715 lpp0716     FALSE 0.048 186.000 0.000 1.000   NA
 754063 754064 lpp0716 lpp0717     TRUE 0.584 26.000 0.000 1.000   NA
 754064 754065 lpp0717 lpp0718     FALSE 0.216 101.000 0.000 1.000 N NA
 754065 754066 lpp0718 lpp0719     TRUE 0.991 9.000 0.043 0.045 N NA
 754067 754068 lpp0720 lpp0721   rpe TRUE 0.737 42.000 0.003 1.000 N NA
 754068 754069 lpp0721 lpp0722 rpe   FALSE 0.023 214.000 0.000 NA   NA
 754069 754070 lpp0722 lpp0723     TRUE 0.993 -3.000 0.102 NA   NA
 754070 754071 lpp0723 lpp0724     TRUE 0.994 -7.000 0.450 NA   NA
 754071 754072 lpp0724 lpp0725     TRUE 0.987 6.000 0.050 NA   NA
 754073 754074 lpp0726 lpp0727     FALSE 0.128 116.000 0.000 1.000   NA
 754074 754075 lpp0727 lpp0728     FALSE 0.491 42.000 0.000 1.000 N NA
 754075 754076 lpp0728 lpp0729     FALSE 0.363 37.000 0.000 NA   NA
 754076 754077 lpp0729 lpp0730     TRUE 0.995 -7.000 0.500 NA   NA
 754078 754079 lpp0731 lpp0732     TRUE 0.981 -7.000 0.020 NA   NA
 754082 754083 lpp0735 lpp0736 glnE   FALSE 0.015 286.000 0.000 NA N NA
 754083 754084 lpp0736 lpp0737     FALSE 0.186 68.000 0.000 NA   NA
 754084 754085 lpp0737 lpp0738     TRUE 0.996 -7.000 0.752 NA   NA
 754085 754086 lpp0738 lpp0739     TRUE 0.998 -3.000 0.671 0.092 N NA
 754087 754088 lpp0740 lpp0741   dsbD/lidC FALSE 0.244 90.000 0.000 1.000 N NA
 754089 754090 lpp0742 lpp0743 groES htpB TRUE 0.979 28.000 0.154 0.006 Y NA
 754090 754091 lpp0743 lpp0744 htpB   TRUE 0.512 123.000 0.014 1.000 N NA
 754091 754092 lpp0744 lpp0745     FALSE 0.021 257.000 0.000 NA N NA
 754094 754095 lpp0747 lpp0748     FALSE 0.134 89.000 0.000 NA   NA
 754098 754099 lpp0751 lpp0752     FALSE 0.099 141.000 0.000 1.000   NA
 754099 754100 lpp0752 lpp0753     FALSE 0.060 190.000 0.000 NA N NA
 754100 754101 lpp0753 lpp0754   tolC TRUE 0.926 18.000 0.005 NA N NA
 754101 754102 lpp0754 lpp0755 tolC   TRUE 0.974 12.000 0.009 1.000 N NA
 754103 754104 lpp0756 lpp0757 kbl tdh TRUE 0.867 87.000 0.547 1.000 N NA
 754104 754105 lpp0757 lpp0758 tdh   TRUE 0.712 43.000 0.005 1.000   NA
 754105 754106 lpp0758 lpp0759     TRUE 0.655 42.000 0.004 NA   NA
 754106 754107 lpp0759 lpp0760     FALSE 0.107 110.000 0.000 NA   NA
 754107 754108 lpp0760 lpp0761     TRUE 0.991 0.000 0.042 NA   NA
 754109 754110 lpp0762 lpp0763     FALSE 0.235 57.000 0.000 NA   NA
 754110 754111 lpp0763 lpp0764   hutG TRUE 0.962 13.000 0.016 NA   NA
 754112 754113 lpp0765 lpp0766   hutI TRUE 0.939 0.000 0.000 1.000   NA
 754113 754114 lpp0766 lpp0767 hutI   FALSE 0.489 27.000 0.000 NA   NA
 754114 754115 lpp0767 lpp0768     TRUE 0.992 0.000 0.051 NA   NA
 754116 754117 lpp0769 lpp0770     FALSE 0.077 142.000 0.000 NA   NA
 754118 754119 lpp0771 lpp0772     TRUE 0.515 -87.000 0.000 NA   NA
 754120 754121 lpp0773 lpp0774     TRUE 0.917 1.000 0.000 NA   NA
 754121 754122 lpp0774 lpp0775     FALSE 0.009 276.000 0.000 NA   NA
 754122 754123 lpp0775 lpp0776     TRUE 0.620 -33.000 0.000 NA   NA
 754123 754124 lpp0776 lpp0777     TRUE 0.582 -42.000 0.000 NA   NA
 754124 754125 lpp0777 lpp0778     TRUE 0.917 1.000 0.000 NA   NA
 754127 754128 lpp0780 lpp0781     TRUE 0.936 -19.000 0.000 1.000 Y NA
 754130 754131 lpp0783 lpp0784     FALSE 0.134 89.000 0.000 NA   NA
 754131 754132 lpp0784 lpp0785   valS FALSE 0.188 122.000 0.000 1.000 N NA
 754132 754133 lpp0785 lpp0786 valS   FALSE 0.024 259.000 0.000 1.000 N NA
 754133 754134 lpp0786 lpp0787     TRUE 0.853 117.000 0.600 0.077 N NA
 754135 754136 lpp0788 lpp0789     FALSE 0.195 66.000 0.000 NA   NA
 754136 754137 lpp0789 lpp0790     FALSE 0.093 125.000 0.000 NA   NA
 754137 754138 lpp0790 lpp0791   glyA TRUE 0.896 28.000 0.044 NA   NA
 754138 754139 lpp0791 lpp0792 glyA   TRUE 0.990 3.000 0.024 NA N NA
 754139 754140 lpp0792 lpp0793   nusB TRUE 0.837 58.000 0.012 NA Y NA
 754140 754141 lpp0793 lpp0794 nusB thiL TRUE 0.994 -7.000 0.225 1.000 N NA
 754141 754142 lpp0794 lpp0795 thiL pgpA TRUE 0.791 90.000 0.206 1.000 N NA
 754142 754143 lpp0795 lpp0796 pgpA   TRUE 0.983 0.000 0.005 NA   NA
 754144 754145 lpp0797 lpp0798     TRUE 0.932 10.000 0.000 0.009   NA
 754148 754149 lpp0801 lpp0802     FALSE 0.011 259.000 0.000 NA   NA
 754149 754150 lpp0802 lpp0803   dnaB FALSE 0.044 178.000 0.000 NA   NA
 754150 754151 lpp0803 lpp0804 dnaB   TRUE 0.992 2.000 0.025 1.000 N NA
 754151 754152 lpp0804 lpp0805     TRUE 0.895 73.000 0.154 1.000 Y NA
 754152 754153 lpp0805 lpp0806     FALSE 0.009 308.000 0.000 1.000   NA
 754153 754154 lpp0806 lpp0807     TRUE 0.827 109.000 1.000 NA   NA
 754154 754155 lpp0807 lpp0808     FALSE 0.105 112.000 0.000 NA   NA
 754155 754156 lpp0808 lpp0809     TRUE 0.920 -3.000 0.000 NA   NA
 754156 754157 lpp0809 lpp0810   lipA FALSE 0.139 152.000 0.000 1.000 N NA
 754158 754159 lpp0811 lpp0812   iraB FALSE 0.005 883.000 0.000 1.000 N NA
 754159 754160 lpp0812 lpp0813 iraB iraA TRUE 0.942 39.000 0.500 1.000   NA
 754161 754162 lpp0814 lpp0815   hisF TRUE 0.921 0.000 0.000 NA   NA
 754162 754163 lpp0815 lpp0816 hisF hisH TRUE 0.990 -3.000 0.000 0.005 Y NA
 754163 754164 lpp0816 lpp0817 hisH neuA TRUE 0.887 13.000 0.000 1.000 N NA
 754164 754165 lpp0817 lpp0818 neuA neuB TRUE 0.998 -3.000 0.105 1.000 Y NA
 754165 754166 lpp0818 lpp0819 neuB neuC TRUE 0.999 0.000 0.549 1.000 Y NA
 754166 754167 lpp0819 lpp0820 neuC   TRUE 0.857 -10.000 0.000 1.000   NA
 754167 754168 lpp0820 lpp0821     TRUE 0.975 11.000 0.016 1.000   NA
 754168 754169 lpp0821 lpp0822   rmlC FALSE 0.474 90.000 0.000 1.000 Y NA
 754169 754170 lpp0822 lpp0823 rmlC rmlD TRUE 0.985 1.000 0.000 1.000 Y NA
 754170 754171 lpp0823 lpp0824 rmlD rmlB TRUE 0.929 -40.000 0.000 0.002 Y NA
 754171 754172 lpp0824 lpp0825 rmlB gpi TRUE 0.522 39.000 0.000 1.000 N NA
 754172 754173 lpp0825 lpp0826 gpi rmlA FALSE 0.136 155.000 0.000 1.000 N NA
 754173 754174 lpp0826 lpp0827 rmlA   TRUE 0.934 21.000 0.000 0.002 Y NA
 754174 754175 lpp0827 lpp0828   wecA TRUE 0.993 -16.000 0.250 1.000 Y NA
 754175 754176 lpp0828 lpp0829a wecA   FALSE 0.110 105.000 0.000 NA   NA
 754176 754177 lpp0829a lpp0829b     TRUE 0.772 -13.000 0.000 NA   NA
 754177 754178 lpp0829b lpp0829c     TRUE 0.656 -24.000 0.000 NA   NA
 754179 754180 lpp0830 lpp0831     TRUE 0.906 3.000 0.000 NA   NA
 754180 754181 lpp0831 lpp0832     TRUE 0.831 11.000 0.000 NA   NA
 754181 754182 lpp0832 lpp0833     TRUE 0.820 -10.000 0.000 NA   NA
 754182 754183 lpp0833 lpp0834     TRUE 0.826 13.000 0.000 1.000   NA
 754184 754185 lpp0835 lpp0836     FALSE 0.017 233.000 0.000 NA   NA
 754185 754186 lpp0836 lpp0837   wzm TRUE 0.610 -34.000 0.000 NA   NA
 754186 754187 lpp0837 lpp0838 wzm wzt TRUE 0.961 -3.000 0.000 0.091   NA
 754187 754188 lpp0838 lpp0839 wzt   TRUE 0.877 6.000 0.000 NA   NA
 754191 754192 lpp0842 lpp0843     TRUE 0.989 -6.000 0.065 NA   NA
 754193 754194 lpp0844 lpp0845   csrA FALSE 0.003 559.000 0.000 1.000   NA
 754195 754196 lpp0846 lpp0847   birA FALSE 0.120 163.000 0.000 1.000 N NA
 754196 754197 lpp0847 lpp0848 birA   TRUE 0.993 4.000 0.005 1.000 Y NA
 754198 754199 lpp0849 lpp0850 accA   TRUE 0.992 -7.000 0.123 1.000 N NA
 754199 754200 lpp0850 lpp0851     FALSE 0.006 350.000 0.000 1.000   NA
 754200 754201 lpp0851 lpp0852     FALSE 0.007 339.000 0.000 1.000   NA
 754201 754202 lpp0852 lpp0853     TRUE 0.920 -3.000 0.000 NA   NA
 754204 754205 lpp0855 lpp0856 mip   FALSE 0.384 166.000 0.039 1.000   NA
 754205 754206 lpp0856 lpp0857     FALSE 0.134 112.000 0.000 1.000   NA
 754206 754207 lpp0857 lpp0858a     TRUE 0.597 -39.000 0.000 NA   NA
 754207 754208 lpp0858a lpp0858b     TRUE 0.525 -79.000 0.000 NA   NA
 754208 754209 lpp0858b lpp0859     FALSE 0.003 511.000 0.000 NA   NA
 754212 754213 lpp0861 lpp0862 nadA nadB TRUE 0.931 75.000 0.210 0.003 Y NA
 754213 754214 lpp0862 lpp0863 nadB purB TRUE 0.984 -3.000 0.002 1.000 N NA
 754216 754217 lpp0865 lpp0866     FALSE 0.037 230.000 0.000 1.000 N NA
 754218 754219 lpp0867 lpp0868 ppsA   FALSE 0.031 242.000 0.000 1.000 N NA
 754219 754220 lpp0868 lpp0869   nadC TRUE 0.985 -3.000 0.002 1.000 N NA
 754220 754221 lpp0869 lpp0870 nadC murG TRUE 0.985 -3.000 0.002 1.000 N NA
 754221 754222 lpp0870 lpp0871 murG   TRUE 0.924 -25.000 0.004 1.000 N NA
 754222 754223 lpp0871 lpp0872     FALSE 0.476 92.000 0.008 1.000   NA
 754223 754224 lpp0872 lpp0873   mreB FALSE 0.130 196.000 0.003 1.000   NA
 754224 754225 lpp0873 lpp0874 mreB mreC TRUE 0.990 -22.000 0.689 1.000 N NA
 754225 754226 lpp0874 lpp0875 mreC mreD TRUE 0.999 -3.000 0.550 0.003 Y NA
 754228 754229 lpp0877 lpp0878   icd FALSE 0.107 110.000 0.000 NA   NA
 754229 754230 lpp0878 lpp0879 icd   FALSE 0.024 402.000 0.013 NA   NA
 754230 754231 lpp0879 lpp0880   clpA TRUE 0.958 32.000 0.596 NA   NA
 754231 754232 lpp0880 lpp0881 clpA   FALSE 0.010 301.000 0.000 1.000   NA
 754232 754233 lpp0881 lpp0882     TRUE 0.584 26.000 0.000 1.000   NA
 754233 754234 lpp0882 lpp0883     FALSE 0.134 156.000 0.000 1.000 N NA
 754234 754235 lpp0883 lpp0884     TRUE 0.981 3.000 0.007 NA   NA
 754236 754237 lpp0885 lpp0886     FALSE 0.265 170.000 0.013 NA   NA
 754237 754238 lpp0886 lpp0887     TRUE 0.938 -3.000 0.000 1.000   NA
 754238 754239 lpp0887 lpp0888   xseA TRUE 0.987 9.000 0.032 1.000 N NA
 754240 754241 lpp0889 lpp0890     TRUE 0.559 -49.000 0.000 NA   NA
 754241 754242 lpp0890 lpp0891     TRUE 0.717 16.000 0.000 NA   NA
 754242 754243 lpp0891 lpp0892     FALSE 0.103 136.000 0.000 1.000   NA
 754243 754244 lpp0892 lpp0893     TRUE 0.728 -22.000 0.000 1.000   NA
 754245 754246 lpp0894 lpp0895   trpC FALSE 0.004 476.000 0.000 1.000   NA
 754246 754247 lpp0895 lpp0896 trpC trpD TRUE 0.997 -7.000 0.293 1.000 Y NA
 754247 754248 lpp0896 lpp0897 trpD trpG TRUE 0.986 -22.000 0.105 1.000 Y NA
 754248 754249 lpp0897 lpp0898 trpG   FALSE 0.470 34.000 0.000 1.000   NA
 754249 754250 lpp0898 lpp0899     TRUE 0.997 -3.000 0.543 NA   NA
 754250 754251 lpp0899 lpp0900     TRUE 0.985 -19.000 0.459 NA   NA
 754251 754252 lpp0900 lpp0901     TRUE 0.997 -3.000 0.617 NA   NA
 754252 754253 lpp0901 lpp0902   kdsD TRUE 0.991 14.000 0.598 1.000   NA
 754254 754255 lpp0903 lpp0904     TRUE 0.998 -7.000 0.530 NA Y NA
 754255 754256 lpp0904 lpp0905     TRUE 0.997 1.000 0.562 NA   NA
 754256 754257 lpp0905 lpp0906     TRUE 0.988 8.000 0.091 NA   NA
 754257 754258 lpp0906 lpp0907     TRUE 0.997 3.000 0.353 NA N NA
 754258 754259 lpp0907 lpp0908     FALSE 0.098 390.000 0.067 NA Y NA
 754259 754260 lpp0908 lpp0909   murA TRUE 0.994 -7.000 0.258 NA N NA
 754260 754261 lpp0909 lpp0910 murA   TRUE 0.984 -3.000 0.007 NA   NA
 754262 754263 lpp0911 lpp0912     TRUE 0.998 -3.000 0.400 1.000 N NA
 754263 754264 lpp0912 lpp0913     TRUE 0.999 0.000 0.400 0.076 Y NA
 754265 754266 lpp0914 lpp0915   fleQ FALSE 0.205 196.000 0.022 NA   NA
 754267 754268 lpp0916 lpp0917     FALSE 0.020 223.000 0.000 NA   NA
 754269 754270 lpp0918 lpp0919 ccmA ccmB TRUE 0.999 -3.000 0.503 0.003 Y NA
 754270 754271 lpp0919 lpp0920 ccmB ccmC TRUE 0.710 214.000 0.501 0.001 Y NA
 754271 754272 lpp0920 lpp0921 ccmC ccmD TRUE 0.973 -79.000 0.501 1.000   NA
 754272 754273 lpp0921 lpp0922 ccmD ccmE TRUE 0.995 6.000 0.344 1.000   NA
 754273 754274 lpp0922 lpp0923 ccmE ccmF TRUE 0.996 -3.000 0.005 0.003 Y NA
 754274 754275 lpp0923 lpp0924 ccmF ccmG TRUE 0.999 -3.000 1.000 0.003 Y NA
 754275 754276 lpp0924 lpp0925 ccmG ccmH TRUE 0.999 0.000 0.375 NA Y NA
 754276 754277 lpp0925 lpp0926 ccmH   TRUE 0.993 -7.000 0.030 NA Y NA
 754277 754278 lpp0926 lpp0927     TRUE 0.820 -10.000 0.000 NA   NA
 754278 754279 lpp0927 lpp0928     FALSE 0.242 56.000 0.000 NA   NA
 754280 754281 lpp0929 lpp0930     TRUE 0.988 10.000 0.005 1.000 Y NA
 754282 754283 lpp0931 lpp0932     TRUE 0.977 17.000 0.013 1.000 Y NA
 754283 754284 lpp0932 lpp0933     TRUE 0.996 3.000 0.020 0.068 Y NA
 754287 754288 lpp0936 lpp0937   pntB FALSE 0.082 135.000 0.000 NA   NA
 754288 754289 lpp0937 lpp0938 pntB pnaB TRUE 0.957 24.000 0.058 0.001   NA
 754289 754290 lpp0938 lpp0939 pnaB pntA TRUE 0.997 -7.000 0.829 0.001   NA
 754290 754291 lpp0939 lpp0940 pntA   FALSE 0.005 394.000 0.000 1.000   NA
 754291 754292 lpp0940 lpp0941     FALSE 0.012 254.000 0.000 NA   NA
 754294 754295 lpp0943 lppt13   tRNA-Ser FALSE 0.049 173.000 0.000 NA   NA
 754296 754297 lpp0944 lpp0945     FALSE 0.094 124.000 0.000 NA   NA
 754297 754298 lpp0945 lpp0946     TRUE 0.797 127.000 1.000 NA   NA
 754298 754299 lpp0946 lpp0947     FALSE 0.005 515.000 0.000 1.000 N NA
 754300 754301 lpp0948 lpp0949 dapE dapD TRUE 0.997 -7.000 0.109 0.002 Y NA
 754301 754302 lpp0949 lpp0950 dapD   TRUE 0.949 4.000 0.000 1.000 N NA
 754302 754303 lpp0950 lpp0951   metB FALSE 0.335 67.000 0.000 1.000 N NA
 754304 754305 lpp0952 lpp0953     FALSE 0.015 302.000 0.000 1.000 N NA
 754305 754306 lpp0953 lpp0954     FALSE 0.021 218.000 0.000 NA   NA
 754306 754307 lpp0954 lpp0955     TRUE 0.926 -43.000 0.039 NA   NA
 754307 754308 lpp0955 lpp0956     FALSE 0.005 350.000 0.000 NA   NA
 754308 754309 lpp0956 lpp0957     TRUE 0.877 6.000 0.000 NA   NA
 754310 754311 lpp0958 lpp0959     FALSE 0.009 273.000 0.000 NA   NA
 754311 754312 lpp0959 lpp0960   mutY FALSE 0.015 239.000 0.000 NA   NA
 754312 754313 lpp0960 lpp0961 mutY   TRUE 0.990 -3.000 0.033 NA   NA
 754314 754315 lpp0962 lpp0963     TRUE 0.831 11.000 0.000 NA   NA
 754315 754316 lpp0963 lpp0964     FALSE 0.022 216.000 0.000 NA   NA
 754316 754317 lpp0964 lpp0965     TRUE 0.645 -25.000 0.000 NA   NA
 754317 754318 lpp0965 lpp0966     FALSE 0.190 120.000 0.000 1.000 N NA
 754318 754319 lpp0966 lpp0967     FALSE 0.167 210.000 0.000 0.068 Y NA
 754320 754321 lpp0968 lpp0969   flgM TRUE 0.964 17.000 0.019 0.003   NA
 754321 754322 lpp0969 lpp0970 flgM flgA FALSE 0.128 91.000 0.000 NA   NA
 754323 754324 lpp0971 lpp0972     TRUE 0.635 77.000 0.035 NA   NA
 754324 754325 lpp0972 lpp0973     FALSE 0.008 287.000 0.000 NA   NA
 754325 754326 lpp0973 lpp0974     FALSE 0.002 618.000 0.000 NA   NA
 754326 754327 lpp0974 lpp0975     TRUE 0.993 12.000 0.635 NA   NA
 754327 754328 lpp0975 lpp0976     TRUE 0.997 -3.000 0.227 1.000 N NA
 754328 754329 lpp0976 lpp0977   ftsI FALSE 0.078 381.000 0.153 1.000 N NA
 754329 754330 lpp0977 lpp0978 ftsI murE TRUE 0.980 21.000 0.073 1.000 Y NA
 754331 754332 lpp0979 lpp0980 pdxB   TRUE 0.984 -3.000 0.004 1.000   NA
 754333 754334 lpp0981 lpp0982     TRUE 0.831 40.000 0.038 1.000   NA
 754334 754335 lpp0982 lpp0983     FALSE 0.142 85.000 0.000 NA   NA
 754335 754336 lpp0983 lpp0984   etfB FALSE 0.012 253.000 0.000 NA   NA
 754336 754337 lpp0984 lpp0985 etfB etfA TRUE 0.994 14.000 0.167 0.010 Y NA
 754337 754338 lpp0985 lpp0986 etfA ald TRUE 0.977 12.000 0.006 0.041 N NA
 754339 754340 lpp0987 lpp0988 mrcA   FALSE 0.072 150.000 0.000 NA   NA
 754341 754342 lpp0989 lpp0990 pilM pilN TRUE 0.998 4.000 0.616 NA Y NA
 754342 754343 lpp0990 lpp0991 pilN pilO TRUE 0.996 14.000 0.770 NA Y NA
 754343 754344 lpp0991 lpp0992 pilO pilP TRUE 0.999 -3.000 0.680 NA Y NA
 754344 754345 lpp0992 lpp0993 pilP pilQ TRUE 0.999 4.000 0.668 NA Y NA
 754345 754346 lpp0993 lpp0994 pilQ aroK FALSE 0.086 446.000 0.319 1.000 N NA
 754346 754347 lpp0994 lpp0995 aroK aroB TRUE 0.994 -13.000 0.208 1.000 Y NA
 754347 754348 lpp0995 lpp0996 aroB   TRUE 0.989 -3.000 0.023 NA   NA
 754348 754349 lpp0996 lpp0997     FALSE 0.108 109.000 0.000 NA   NA
 754349 754350 lpp0997 lpp0998   ribF FALSE 0.478 124.000 0.009 1.000 N NA
 754350 754351 lpp0998 lpp0999 ribF ileS TRUE 0.768 113.000 0.254 1.000 N NA
 754351 754352 lpp0999 lpp1000 ileS lspA TRUE 0.996 -3.000 0.147 1.000 N NA
 754353 754354 lpp1001 lpp1002   lidA FALSE 0.045 177.000 0.000 NA   NA
 754354 754355 lpp1002 lpp1003 lidA   FALSE 0.014 242.000 0.000 NA   NA
 754356 754357 lpp1004 lpp1005   recO TRUE 0.985 -10.000 0.109 1.000   NA
 754358 754359 lpp1006 lpp1007     FALSE 0.061 162.000 0.000 NA   NA
 754360 754361 lpp1008 lpp1009 pdxJ   TRUE 0.956 -13.000 0.004 1.000 N NA
 754361 754362 lpp1009 lpp1010     TRUE 0.997 -16.000 0.832 0.001 Y NA
 754364 754365 lpp1012 lpp1013   tldD TRUE 0.989 12.000 0.259 NA   NA
 754365 754366 lpp1013 lpp1014 tldD   TRUE 0.695 46.000 0.007 NA   NA
 754366 754367 lpp1014 lpp1015     TRUE 0.556 27.000 0.000 1.000   NA
 754368 754369 lpp1016 lpp1017 mfd   FALSE 0.161 77.000 0.000 NA   NA
 754369 754370 lpp1017 lpp1018     TRUE 0.975 4.000 0.004 NA   NA
 754370 754371 lpp1018 lpp1019     TRUE 0.998 -3.000 0.846 NA   NA
 754372 754373 lpp1020 lpp1021 lig   FALSE 0.345 129.000 0.002 1.000 N NA
 754373 754374 lpp1021 lpp1022     TRUE 0.999 -3.000 0.619 0.034 Y NA
 754374 754375 lpp1022 lpp1023     TRUE 0.993 24.000 0.738 0.034 Y NA
 754375 754376 lpp1023 lpp1024   dnaE FALSE 0.305 75.000 0.000 1.000 N NA
 754378 754379 lpp1026 lpp1027     TRUE 0.597 -39.000 0.000 NA   NA
 754379 754380 lpp1027 lpp1028     FALSE 0.190 67.000 0.000 NA   NA
 754381 754382 lpp1029 lpp1030     FALSE 0.006 326.000 0.000 NA   NA
 754385 754386 lpp1033 lppt14   tRNA-Thr TRUE 0.691 17.000 0.000 NA   NA
 754386 754387 lppt14 lpp1034 tRNA-Thr   FALSE 0.003 460.000 0.000 NA   NA
 754389 754390 lpp1036 lpp1037     FALSE 0.177 72.000 0.000 NA   NA
 754390 754391 lpp1037 lpp1038     FALSE 0.003 483.000 0.000 NA   NA
 754391 754392 lpp1038 lpp1039     TRUE 0.513 136.000 0.080 NA   NA
 754392 754393 lpp1039 lpp1040     TRUE 0.994 -13.000 1.000 1.000 N NA
 754393 754394 lpp1040 lpp1041     FALSE 0.002 905.000 0.000 NA   NA
 754397 754398 lpp1044 lpp1045     FALSE 0.195 66.000 0.000 NA   NA
 754398 754399 lpp1045 lpp1046     FALSE 0.114 100.000 0.000 NA   NA
 754401 754402 lpp1048 lpp1049     TRUE 0.868 -7.000 0.000 NA   NA
 754404 754405 lpp1051 lpp1052     FALSE 0.267 52.000 0.000 NA   NA
 754407 754408 lpp1054 lpp1055     FALSE 0.028 203.000 0.000 NA   NA
 754408 754409 lpp1055 lpp1056     TRUE 0.920 -3.000 0.000 NA   NA
 754409 754410 lpp1056 lpp1057     FALSE 0.033 194.000 0.000 NA   NA
 754410 754411 lpp1057 lpp1058     TRUE 0.906 3.000 0.000 NA   NA
 754411 754412 lpp1058 lpp1059     TRUE 0.847 10.000 0.000 NA   NA
 754412 754413 lpp1059 lpp1060     TRUE 0.868 -7.000 0.000 NA   NA
 754413 754414 lpp1060 lpp1061     TRUE 0.847 10.000 0.000 NA   NA
 754414 754415 lpp1061 lpp1062     TRUE 0.573 -43.000 0.000 NA   NA
 754415 754416 lpp1062 lpp1063     TRUE 0.920 -3.000 0.000 NA   NA
 754416 754417 lpp1063 lpp1064     TRUE 0.772 -13.000 0.000 NA   NA
 754417 754418 lpp1064 lpp1065     TRUE 0.868 -7.000 0.000 NA   NA
 754418 754419 lpp1065 lpp1066     TRUE 0.812 12.000 0.000 NA   NA
 754419 754420 lpp1066 lpp1067     TRUE 0.920 -3.000 0.000 NA   NA
 754420 754421 lpp1067 lpp1068     TRUE 0.921 0.000 0.000 NA   NA
 754421 754422 lpp1068 lpp1069     TRUE 0.847 10.000 0.000 NA   NA
 754422 754423 lpp1069 lpp1070     TRUE 0.840 -9.000 0.000 NA   NA
 754423 754424 lpp1070 lpp1071     TRUE 0.921 0.000 0.000 NA   NA
 754424 754425 lpp1071 lpp1072     TRUE 0.868 -7.000 0.000 NA   NA
 754425 754426 lpp1072 lpp1073     TRUE 0.920 -3.000 0.000 NA   NA
 754426 754427 lpp1073 lpp1074     TRUE 0.868 -7.000 0.000 NA   NA
 754427 754428 lpp1074 lpp1075     TRUE 0.889 -6.000 0.000 NA   NA
 754428 754429 lpp1075 lpp1076     TRUE 0.507 -148.000 0.000 NA   NA
 754430 754431 lpp1077 lpp1078     FALSE 0.205 76.000 0.000 1.000   NA
 754432 754433 lpp1079 lpp1080     FALSE 0.113 102.000 0.000 NA   NA
 754433 754434 lpp1080 lpp1081     FALSE 0.118 98.000 0.000 NA   NA
 754434 754435 lpp1081 lpp1082     TRUE 0.812 12.000 0.000 NA   NA
 754435 754436 lpp1082 lpp1083     TRUE 0.911 5.000 0.000 1.000   NA
 754436 754437 lpp1083 lpp1084     TRUE 0.707 -19.000 0.000 NA   NA
 754437 754438 lpp1084 lpp1085     FALSE 0.455 29.000 0.000 NA   NA
 754439 754440 lpp1086 lpp1087     TRUE 0.579 23.000 0.000 NA   NA
 754442 754443 lpp1089 lpp1090     FALSE 0.133 113.000 0.000 1.000   NA
 754443 754444 lpp1090 lpp1091     FALSE 0.007 332.000 0.000 1.000   NA
 754444 754445 lpp1091 lpp1092     FALSE 0.181 84.000 0.000 1.000   NA
 754445 754446 lpp1092 lpp1093     FALSE 0.005 556.000 0.000 0.066   NA
 754446 754447 lpp1093 lpp1094     FALSE 0.069 154.000 0.000 NA   NA
 754447 754448 lpp1094 lpp1095     FALSE 0.073 148.000 0.000 NA   NA
 754448 754449 lpp1095 lpp1096     FALSE 0.096 123.000 0.000 NA   NA
 754450 754451 lpp1097 lpp1098     FALSE 0.130 90.000 0.000 NA   NA
 754451 754452 lpp1098 lpp1099     FALSE 0.010 269.000 0.000 NA   NA
 754453 754454 lpp1100 lpp1101     FALSE 0.002 1088.000 0.000 NA   NA
 754454 754455 lpp1101 lpp1102     FALSE 0.080 136.000 0.000 NA   NA
 754458 754459 lpp1105 lpp1106     FALSE 0.005 336.000 0.000 NA   NA
 754459 754460 lpp1106 lpp1107     FALSE 0.032 195.000 0.000 NA   NA
 754460 754461 lpp1107 lpp1108     FALSE 0.047 187.000 0.000 1.000   NA
 754461 754462 lpp1108 lpp1109     FALSE 0.015 241.000 0.000 NA   NA
 754462 754463 lpp1109 lpp1110     FALSE 0.008 293.000 0.000 NA   NA
 754465 754466 lpp1112 lpp1113     FALSE 0.022 216.000 0.000 NA   NA
 754466 754467 lpp1113 lpp1114     FALSE 0.003 477.000 0.000 NA   NA
 754467 754468 lpp1114 lpp1115     FALSE 0.241 66.000 0.000 1.000   NA
 754468 754469 lpp1115 lpp1116     TRUE 0.911 5.000 0.000 1.000   NA
 754471 754472 lpp1118 lpp1119     FALSE 0.159 92.000 0.000 1.000   NA
 754473 754474 lpp1120 lpp1121 map   FALSE 0.031 198.000 0.000 NA   NA
 754477 754478 lpp1124 lpp1125     FALSE 0.016 236.000 0.000 NA   NA
 754479 754480 lpp1126 lpp1127     FALSE 0.081 184.000 0.000 0.042   NA
 754482 754483 lpp1129 lpp1130     FALSE 0.003 428.000 0.000 NA   NA
 754484 754485 lpp1131 lpp1132 ladC   FALSE 0.061 162.000 0.000 NA   NA
 754485 754486 lpp1132 lpp1133   cfa FALSE 0.058 165.000 0.000 NA   NA
 754486 754487 lpp1133 lpp1134 cfa   FALSE 0.255 54.000 0.000 NA   NA
 754487 754488 lpp1134 lpp1135     FALSE 0.022 217.000 0.000 NA   NA
 754488 754489 lpp1135 lpp1136     TRUE 0.728 -22.000 0.000 1.000   NA
 754491 754492 lpp1138 lpp1139     FALSE 0.019 226.000 0.000 NA   NA
 754492 754493 lpp1139 lpp1140   potD FALSE 0.009 281.000 0.000 NA   NA
 754493 754494 lpp1140 lpp1141 potD potC TRUE 0.996 -3.000 0.010 0.033 Y NA
 754494 754495 lpp1141 lpp1142 potC potB TRUE 0.999 -3.000 0.286 0.033 Y NA
 754495 754496 lpp1142 lpp1143 potB potA TRUE 0.993 -34.000 0.789 1.000 Y NA
 754496 754497 lpp1143 lpp1144 potA   FALSE 0.165 169.000 0.000 0.017 N NA
 754497 754498 lpp1144 lpp1145     FALSE 0.038 200.000 0.000 1.000   NA
 754498 754499 lpp1145 lpp1146     FALSE 0.005 343.000 0.000 NA   NA
 754500 754501 lpp1147 lpp1148     FALSE 0.086 130.000 0.000 NA   NA
 754501 754502 lpp1148 lpp1149     FALSE 0.120 124.000 0.000 1.000   NA
 754502 754503 lpp1149 lpp1150     FALSE 0.006 321.000 0.000 NA   NA
 754503 754504 lpp1150 lpp1151     FALSE 0.044 178.000 0.000 NA   NA
 754504 754505 lpp1151 lpp1152     FALSE 0.120 97.000 0.000 NA   NA
 754506 754507 lpp1153 lpp1154     FALSE 0.025 211.000 0.000 NA   NA
 754507 754508 lpp1154 lpp1155     TRUE 0.518 26.000 0.000 NA   NA
 754509 754510 lpp1156 lpp1157     FALSE 0.015 240.000 0.000 NA   NA
 754512 754513 lpp1159 lpp1160     FALSE 0.073 149.000 0.000 NA   NA
 754513 754514 lpp1160 lpp1161     FALSE 0.004 369.000 0.000 NA   NA
 754518 754519 lpp1165 lpp1166     TRUE 0.903 12.000 0.000 1.000 N NA
 754519 754520 lpp1166 lpp1167     FALSE 0.012 326.000 0.000 1.000 N NA
 754523 754524 lpp1170 lpp1171     FALSE 0.070 152.000 0.000 NA   NA
 754525 754526 lpp1172 lpp1173     FALSE 0.225 59.000 0.000 NA   NA
 754526 754527 lpp1173 lpp1174   lidL FALSE 0.061 162.000 0.000 NA   NA
 754527 754528 lpp1174 lpp1175 lidL pilS FALSE 0.147 99.000 0.000 1.000   NA
 754528 754529 lpp1175 lpp1176 pilS pilR TRUE 0.999 -3.000 0.556 0.035 Y NA
 754529 754530 lpp1176 lpp1177 pilR   FALSE 0.003 430.000 0.000 NA   NA
 754531 754532 lpp1178 lpp1179     FALSE 0.009 279.000 0.000 NA   NA
 754533 754534 lpp1180 lpp1181 ribD ribE TRUE 0.995 -15.000 0.456 1.000 Y NA
 754534 754535 lpp1181 lpp1182 ribE ribA TRUE 0.995 -3.000 0.009 1.000 Y NA
 754535 754536 lpp1182 lpp1183 ribA ribH TRUE 0.994 8.000 0.008 0.003 Y NA
 754536 754537 lpp1183 lpp1184 ribH pyrG FALSE 0.179 126.000 0.000 1.000 N NA
 754537 754538 lpp1184 lpp1185 pyrG kdsA TRUE 0.996 -3.000 0.138 1.000 N NA
 754538 754539 lpp1185 lpp1186 kdsA   FALSE 0.027 205.000 0.000 NA   NA
 754539 754540 lpp1186 lpp1187     FALSE 0.126 92.000 0.000 NA   NA
 754543 754544 lpp1189 lpp1190     TRUE 0.745 118.000 0.222 1.000 N NA
 754544 754545 lpp1190 lpp1191     FALSE 0.467 28.000 0.000 NA   NA
 754546 754547 lpp1192 lpp1193     FALSE 0.118 125.000 0.000 1.000   NA
 754547 754548 lpp1193 lpp1194     FALSE 0.078 140.000 0.000 NA   NA
 754549 754550 lpp1195 lpp1196 hisI hisF TRUE 0.999 -3.000 0.430 0.005 Y NA
 754550 754551 lpp1196 lpp1197 hisF hisA TRUE 0.999 -6.000 0.433 0.005 Y NA
 754551 754552 lpp1197 lpp1198 hisA hisH TRUE 0.998 -6.000 0.210 0.005 Y NA
 754552 754553 lpp1198 lpp1199 hisH hisB TRUE 0.998 -3.000 0.128 0.005 Y NA
 754553 754554 lpp1199 lpp1200 hisB hisC TRUE 0.994 -22.000 0.341 0.005 Y NA
 754554 754555 lpp1200 lpp1201 hisC hisD TRUE 0.999 1.000 0.294 0.005 Y NA
 754555 754556 lpp1201 lpp1202 hisD hisG TRUE 0.998 6.000 0.171 0.005 Y NA
 754556 754557 lpp1202 lpp1203 hisG   TRUE 0.989 -3.000 0.013 1.000   NA
 754558 754559 lpp1204 lpp1205 cydA cydB TRUE 0.997 16.000 0.953 0.039 Y NA
 754561 754562 lpp1207 lpp1208     FALSE 0.003 511.000 0.000 NA   NA
 754562 754563 lpp1208 lpp1209     FALSE 0.064 160.000 0.000 NA   NA
 754565 754566 lpp1211 lpp1212     TRUE 0.938 -3.000 0.000 1.000   NA
 754568 754569 lpp1214 lpp1215     FALSE 0.229 58.000 0.000 NA   NA
 754569 754570 lpp1215 lpp1216     FALSE 0.004 389.000 0.000 NA   NA
 754570 754571 lpp1216 lpp1217     TRUE 0.736 15.000 0.000 NA   NA
 754572 754573 lpp1218 lpp1219     TRUE 0.756 14.000 0.000 NA   NA
 754573 754574 lpp1219 lpp1220     TRUE 0.999 0.000 0.900 0.001   NA
 754574 754575 lpp1220 lpp1221     TRUE 0.998 1.000 0.400 0.001   NA
 754578 754579 lpp1224 lpp1225 flgB flgC TRUE 0.983 3.000 0.000 1.000 Y NA
 754579 754580 lpp1225 lpp1226 flgC flgD TRUE 0.992 11.000 0.043 NA Y NA
 754580 754581 lpp1226 lpp1227 flgD flgE TRUE 0.909 114.000 0.875 NA Y NA
 754581 754582 lpp1227 lpp1228 flgE flgF TRUE 0.978 11.000 0.000 0.003 Y NA
 754582 754583 lpp1228 lpp1229 flgF flgG FALSE 0.417 151.000 0.000 0.001 Y NA
 754583 754584 lpp1229 lpp1230 flgG flgH TRUE 0.997 13.000 0.455 0.007 Y NA
 754584 754585 lpp1230 lpp1231 flgH flgI TRUE 0.960 39.000 0.106 0.007 Y NA
 754585 754586 lpp1231 lpp1232 flgI flgJ TRUE 0.994 12.000 0.064 0.007 Y NA
 754586 754587 lpp1232 lpp1233 flgJ flgK TRUE 0.929 50.000 0.034 0.003 Y NA
 754587 754588 lpp1233 lpp1234 flgK flgL TRUE 0.988 4.000 0.000 0.001 Y NA
 754588 754589 lpp1234 lpp1235 flgL   FALSE 0.041 195.000 0.000 1.000   NA
 754591 754592 lpp1236 lpp1237     FALSE 0.288 48.000 0.000 NA   NA
 754593 754594 lpp1238 lpp1239     FALSE 0.249 89.000 0.000 1.000 N NA
 754595 754596 lpp1240 lpp1241     FALSE 0.146 83.000 0.000 NA   NA
 754596 754597 lpp1241 lpp1242     FALSE 0.377 36.000 0.000 NA   NA
 754599 754600 lpp1244 lpp1245   surE TRUE 0.980 3.000 0.006 NA   NA
 754600 754601 lpp1245 lpp1246 surE nlpD TRUE 0.699 19.000 0.000 1.000   NA
 754601 754602 lpp1246 lpp1247 nlpD rpoS TRUE 0.643 86.000 0.020 1.000 N NA
 754604 754605 lpp1249 lpp1250   ruvC TRUE 0.996 0.000 0.277 NA   NA
 754605 754606 lpp1250 lpp1251 ruvC ruvA TRUE 0.999 -3.000 0.451 0.010 Y NA
 754606 754607 lpp1251 lpp1252 ruvA   FALSE 0.278 50.000 0.000 NA   NA
 754608 754609 lpp1253 lpp1254     FALSE 0.009 282.000 0.000 NA   NA
 754609 754610 lpp1254 lpp1255     TRUE 0.998 -3.000 0.143 1.000 Y NA
 754610 754611 lpp1255 lpp1256     TRUE 0.680 61.000 0.007 1.000 N NA
 754611 754612 lpp1256 lpp1257     FALSE 0.018 243.000 0.000 1.000   NA
 754612 754613 lpp1257 lpp1258   gloB TRUE 0.715 114.000 0.233 1.000   NA
 754613 754614 lpp1258 lpp1259 gloB   TRUE 0.975 4.000 0.004 NA   NA
 754616 754617 lpp1261 lpp1262 FolD   FALSE 0.138 87.000 0.000 NA   NA
 754619 754620 lpp1264 lpp1265     TRUE 0.921 0.000 0.000 NA   NA
 754621 754622 lpp1266 lpp1267 truA trpF TRUE 0.996 1.000 0.139 1.000 N NA
 754622 754623 lpp1267 lpp1268 trpF trpB TRUE 0.999 2.000 0.375 0.001 Y NA
 754623 754624 lpp1268 lpp1269 trpB trpA TRUE 0.989 26.000 0.344 0.001 Y NA
 754624 754625 lpp1269 lpp1270 trpA glnS TRUE 0.987 -3.000 0.004 1.000 N NA
 754625 754626 lpp1270 lpp1271 glnS cysS TRUE 0.994 10.000 0.032 0.039 Y NA
 754626 754627 lpp1271 lpp1272 cysS   FALSE 0.055 179.000 0.000 1.000   NA
 754627 754628 lpp1272 lpp1273     FALSE 0.086 130.000 0.000 NA   NA
 754629 754630 lpp1274 lpp1275 lspE lspD TRUE 0.996 4.000 0.019 0.004 Y NA
 754632 754633 lpp1277 lpp1278     FALSE 0.150 144.000 0.000 1.000 N NA
 754633 754634 lpp1278 lpp1279     TRUE 0.964 -3.000 0.000 0.033   NA
 754634 754635 lpp1279 lpp1280     TRUE 0.895 -7.000 0.000 1.000   NA
 754635 754636 lpp1280 lpp1281     FALSE 0.084 133.000 0.000 NA   NA
 754638 754639 lpp1283 lpp1284     FALSE 0.089 128.000 0.000 NA   NA
 754639 754640 lpp1284 lppt17   tRNA-Met FALSE 0.023 214.000 0.000 NA   NA
 754640 754641 lppt17 lpp1285 tRNA-Met htrA FALSE 0.007 308.000 0.000 NA   NA
 754641 754642 lpp1285 lpp1286 htrA   TRUE 0.966 -7.000 0.004 NA   NA
 754642 754643 lpp1286 lpp1287   rluD TRUE 0.987 -10.000 0.168 NA   NA
 754643 754644 lpp1287 lpp1288 rluD   TRUE 0.993 0.000 0.002 1.000 Y NA
 754644 754645 lpp1288 lpp1289     TRUE 0.755 37.000 0.002 1.000 N NA
 754645 754646 lpp1289 lpp1290     FALSE 0.015 241.000 0.000 NA   NA
 754646 754647 lpp1290 lpp1291   fliS FALSE 0.006 323.000 0.000 NA   NA
 754647 754648 lpp1291 lpp1292 fliS fliD TRUE 0.936 10.000 0.000 0.003   NA
 754648 754649 lpp1292 lpp1293 fliD   FALSE 0.207 63.000 0.000 NA   NA
 754649 754650 lpp1293 lpp1294   flaA FALSE 0.146 83.000 0.000 NA   NA
 754651 754652 lpp1295 lpp1296 accD folC TRUE 0.988 -19.000 0.383 1.000 N NA
 754652 754653 lpp1296 lpp1297 folC   TRUE 0.995 -3.000 0.216 NA   NA
 754653 754654 lpp1297 lpp1298     TRUE 0.971 -19.000 0.116 NA   NA
 754655 754656 lpp1299 lpp1300 nadD   TRUE 0.960 -12.000 0.003 1.000 N NA
 754656 754657 lpp1300 lpp1301     TRUE 0.996 2.000 0.199 NA N NA
 754657 754658 lpp1301 lpp1302   leuS TRUE 0.733 101.000 0.182 NA N NA
 754658 754659 lpp1302 lpp1303 leuS   TRUE 0.630 66.000 0.005 1.000 N NA
 754660 754661 lpp1304 lpp1305     TRUE 0.988 10.000 0.067 NA N NA
 754661 754662 lpp1305 lpp1306     FALSE 0.472 120.000 0.008 1.000 N NA
 754662 754663 lpp1306 lpp1307   fadA TRUE 0.995 16.000 0.588 1.000 Y NA
 754664 754665 lpp1308 lpp1309   sidG FALSE 0.061 162.000 0.000 NA   NA
 754667 754668 lpp1311 lpp1312   lspK FALSE 0.014 315.000 0.000 1.000 N NA
 754668 754669 lpp1312 lpp1313 lspK lspJ TRUE 0.992 -13.000 0.114 1.000 Y NA
 754669 754670 lpp1313 lpp1314 lspJ lspI TRUE 0.994 -3.000 0.042 0.004   NA
 754670 754671 lpp1314 lpp1315 lspI lspH TRUE 0.994 -3.000 0.029 0.004   NA
 754671 754672 lpp1315 lpp1316 lspH lspG TRUE 0.988 -13.000 0.010 0.004 Y NA
 754672 754673 lpp1316 lpp1317 lspG lspF TRUE 0.930 104.000 0.599 0.004 Y NA
 754674 754675 lpp1318 lpp1319 glnA   TRUE 0.946 13.000 0.005 NA   NA
 754675 754676 lpp1319 lpp1320     TRUE 0.944 13.000 0.004 NA   NA
 754676 754677 lpp1320 lpp1321     TRUE 0.786 30.000 0.004 NA   NA
 754677 754678 lpp1321 lpp1322     FALSE 0.024 212.000 0.000 NA   NA
 754678 754679 lpp1322 lpp1323   htpG FALSE 0.029 202.000 0.000 NA   NA
 754680 754681 lpp1324 lpp1325   lpxB FALSE 0.413 116.000 0.003 1.000 N NA
 754681 754682 lpp1325 lpp1326 lpxB   TRUE 0.973 -13.000 0.044 1.000   NA
 754684 754685 lpp1328 lpp1329 rodA mrdA TRUE 0.995 -3.000 0.073 1.000 N NA
 754687 754688 lpp1331 lpp1332     TRUE 0.993 9.000 0.307 NA   NA
 754688 754689 lpp1332 lpp1333     FALSE 0.307 105.000 0.002 NA   NA
 754690 754691 lpp1334 lpp1335 hutU hutH TRUE 0.996 14.000 0.315 0.001 Y NA
 754691 754692 lpp1335 lpp1336 hutH   TRUE 0.934 -7.000 0.000 1.000 N NA
 754692 754693 lpp1336 lpp1337     TRUE 0.850 12.000 0.000 1.000   NA
 754693 754694 lpp1337 lpp1338   rnhA TRUE 0.938 -3.000 0.000 1.000   NA
 754694 754695 lpp1338 lpp1339 rnhA dnaQ TRUE 0.998 5.000 0.248 1.000 Y NA
 754697 754698 lpp1341 lpp1342     FALSE 0.099 119.000 0.000 NA   NA
 754699 754700 lpp1343 lpp1344   trmU FALSE 0.262 135.000 0.003 NA   NA
 754701 754702 lpp1345 lpp1346   rpmF TRUE 0.838 86.000 0.599 NA   NA
 754702 754703 lpp1346 lpp1347 rpmF plsX TRUE 0.996 6.000 0.418 1.000 N NA
 754703 754704 lpp1347 lpp1348 plsX fabH TRUE 0.999 -3.000 0.380 0.004 Y NA
 754704 754705 lpp1348 lpp1349 fabH fabD TRUE 0.983 27.000 0.182 0.004 Y NA
 754705 754706 lpp1349 lpp1350 fabD fabG TRUE 0.997 12.000 0.432 0.004 Y NA
 754706 754707 lpp1350 lpp1351 fabG acp TRUE 0.930 85.000 0.321 0.004 Y NA
 754707 754708 lpp1351 lpp1352 acp fabF TRUE 0.990 20.000 0.346 1.000 Y NA
 754708 754709 lpp1352 lpp1353 fabF   TRUE 0.988 1.000 0.019 NA   NA
 754709 754710 lpp1353 lpp1354   tmk TRUE 0.995 0.000 0.209 NA   NA
 754710 754711 lpp1354 lpp1355 tmk   TRUE 0.997 -3.000 0.211 1.000 N NA
 754711 754712 lpp1355 lpp1356   pilZ TRUE 0.790 111.000 0.382 NA N NA
 754712 754713 lpp1356 lpp1357 pilZ lidH TRUE 0.818 60.000 0.089 NA N NA
 754713 754714 lpp1357 lpp1358 lidH   FALSE 0.381 112.000 0.003 NA N NA
 754714 754715 lpp1358 lpp1359     FALSE 0.363 56.000 0.000 NA N NA
 754721 754722 lpp1365 lpp1366   adk FALSE 0.004 405.000 0.000 NA   NA
 754722 754723 lpp1366 lpp1367 adk   TRUE 0.983 9.000 0.013 1.000 N NA
 754727 754728 lpp1371 lpp1372   gyrA FALSE 0.266 84.000 0.000 1.000 N NA
 754728 754729 lpp1372 lpp1373 gyrA serC TRUE 0.990 -7.000 0.067 1.000 N NA
 754729 754730 lpp1373 lpp1374 serC aroA TRUE 0.994 6.000 0.033 1.000 Y NA
 754730 754731 lpp1374 lpp1375 aroA kcy TRUE 0.997 0.000 0.209 1.000 N NA
 754731 754732 lpp1375 lpp1376 kcy rpsA TRUE 0.878 66.000 0.281 1.000 N NA
 754732 754733 lpp1376 lpp1377 rpsA   FALSE 0.358 114.000 0.005 NA   NA
 754733 754734 lpp1377 lpp1378     TRUE 0.929 47.000 0.576 NA   NA
 754734 754735 lpp1378 lpp1379     FALSE 0.022 264.000 0.000 1.000 N NA
 754735 754736 lpp1379 lpp1380   pyrF TRUE 0.985 1.000 0.003 1.000 N NA
 754736 754737 lpp1380 lpp1381 pyrF   FALSE 0.045 190.000 0.000 1.000   NA
 754737 754738 lpp1381 lpp1382     TRUE 0.613 -55.000 0.000 1.000   NA
 754738 754739 lpp1382 lpp1383     TRUE 0.877 6.000 0.000 NA   NA
 754739 754740 lpp1383 lpp1384     FALSE 0.165 117.000 0.000 NA N NA
 754740 754741 lpp1384 lpp1385   ubiA TRUE 0.998 -3.000 0.248 NA Y NA
 754742 754743 lpp1386 lpp1387     FALSE 0.154 80.000 0.000 NA   NA
 754743 754744 lpp1387 lpp1388   deoC FALSE 0.425 54.000 0.000 1.000 N NA
 754744 754745 lpp1388 lpp1389 deoC xapA TRUE 0.997 -3.000 0.083 1.000 Y NA
 754745 754746 lpp1389 lpp1390 xapA   TRUE 0.995 13.000 0.242 1.000 Y NA
 754746 754747 lpp1390 lpp1391     TRUE 0.798 39.000 0.021 NA   NA
 754747 754748 lpp1391 lpp1392   cpxA TRUE 0.651 177.000 1.000 NA   NA
 754748 754749 lpp1392 lpp1393 cpxA cpxR TRUE 0.998 -7.000 0.667 1.000 Y NA
 754749 754750 lpp1393 lpp1394 cpxR   TRUE 0.983 8.000 0.010 1.000 N NA
 754750 754751 lpp1394 lpp1395     TRUE 0.963 -28.000 0.150 NA   NA
 754751 754752 lpp1395 lpp1396     TRUE 0.997 -3.000 0.457 NA   NA
 754753 754754 lpp1397 lpp1398     TRUE 0.996 -3.000 0.281 NA   NA
 754754 754755 lpp1398 lpp1399   trpS FALSE 0.074 246.000 0.008 NA   NA
 754755 754756 lpp1399 lpp1400 trpS scpA TRUE 0.992 0.000 0.065 NA   NA
 754756 754757 lpp1400 lpp1401 scpA scpB TRUE 0.992 2.000 0.083 NA   NA
 754757 754758 lpp1401 lpp1402 scpB rluB TRUE 0.991 -10.000 0.210 NA N NA
 754758 754759 lpp1402 lpp1403 rluB   FALSE 0.023 263.000 0.000 1.000 N NA
 754759 754760 lpp1403 lpp1404     FALSE 0.009 386.000 0.000 1.000 N NA
 754760 754761 lpp1404 lpp1405     FALSE 0.121 96.000 0.000 NA   NA
 754763 754764 lpp1407 lpp1408     FALSE 0.336 39.000 0.000 NA   NA
 754764 754765 lpp1408 lpp1409     FALSE 0.091 127.000 0.000 NA   NA
 754766 754767 lpp1410 lpp1411     FALSE 0.455 29.000 0.000 NA   NA
 754768 754769 lpp1412 lpp1413 rumA relA TRUE 0.992 6.000 0.082 1.000 N NA
 754771 754772 lpp1415 lpp1416     TRUE 0.886 5.000 0.000 NA   NA
 754772 754773 lpp1416 lpp1417   recJ TRUE 0.820 -10.000 0.000 NA   NA
 754773 754774 lpp1417 lpp1418 recJ   FALSE 0.286 79.000 0.000 1.000 N NA
 754774 754775 lpp1418 lpp1419   secA FALSE 0.489 101.000 0.006 1.000 N NA
 754775 754776 lpp1419 lpp1420 secA mutT TRUE 0.996 -3.000 0.168 1.000 N NA
 754776 754777 lpp1420 lpp1421 mutT   FALSE 0.018 229.000 0.000 NA   NA
 754778 754779 lpp1422 lpp1423     FALSE 0.192 238.000 0.110 1.000   NA
 754779 754780 lpp1423 lpp1424     TRUE 0.850 -28.000 0.002 NA   NA
 754780 754781 lpp1424 lpp1425     TRUE 0.994 -3.000 0.118 NA   NA
 754784 754785 lpp1428 lpp1429 bioB bioF TRUE 0.998 1.000 0.168 1.000 Y NA
 754785 754786 lpp1429 lpp1430 bioF bioH TRUE 0.975 -16.000 0.092 1.000   NA
 754786 754787 lpp1430 lpp1431 bioH bioD TRUE 0.991 -3.000 0.007 0.002   NA
 754787 754788 lpp1431 lpp1432 bioD   FALSE 0.082 135.000 0.000 NA   NA
 754788 754789 lpp1432 lpp1433     TRUE 0.995 -3.000 0.190 NA   NA
 754789 754790 lpp1433 lpp1434   aspS TRUE 0.950 19.000 0.057 NA   NA
 754790 754791 lpp1434 lpp1435 aspS   TRUE 0.905 -25.000 0.002 1.000 N NA
 754791 754792 lpp1435 lpp1436   mutH TRUE 0.940 -37.000 0.017 1.000 N NA
 754793 754794 lpp1437 lpp1438     FALSE 0.030 199.000 0.000 NA   NA
 754796 754797 lpp1440 lpp1441     FALSE 0.011 259.000 0.000 NA   NA
 754797 754798 lpp1441 lpp1442     FALSE 0.141 86.000 0.000 NA   NA
 754799 754800 lpp1443 lpp1444     FALSE 0.013 252.000 0.000 NA   NA
 754800 754801 lpp1444 lpp1445     FALSE 0.025 210.000 0.000 NA   NA
 754801 754802 lpp1445 lpp1446     FALSE 0.057 166.000 0.000 NA   NA
 754802 754803 lpp1446 lpp1447     FALSE 0.047 176.000 0.000 NA   NA
 754806 754807 lpp1450 lpp1451     FALSE 0.017 233.000 0.000 NA   NA
 754808 754809 lpp1452 lpp1453     FALSE 0.004 375.000 0.000 NA   NA
 754809 754810 lpp1453 lpp1454     FALSE 0.021 220.000 0.000 NA   NA
 754811 754812 lpp1455 lpp1456     FALSE 0.138 87.000 0.000 NA   NA
 754812 754813 lpp1456 lpp1457     FALSE 0.283 49.000 0.000 NA   NA
 754813 754814 lpp1457 lpp1458     FALSE 0.003 562.000 0.000 1.000   NA
 754814 754815 lpp1458 lpp1459   lpd FALSE 0.007 334.000 0.000 1.000   NA
 754815 754816 lpp1459 lpp1460 lpd aceF TRUE 0.916 89.000 0.463 1.000 Y NA
 754816 754817 lpp1460 lpp1461 aceF aceE TRUE 0.926 58.000 0.167 1.000 Y NA
 754817 754818 lpp1461 lpp1462 aceE   TRUE 0.896 28.000 0.044 NA   NA
 754818 754819 lpp1462 lpp1463     FALSE 0.336 39.000 0.000 NA   NA
 754819 754820 lpp1463 lpp1464     TRUE 0.992 5.000 0.042 0.062 N NA
 754820 754821 lpp1464 lpp1465     FALSE 0.006 319.000 0.000 NA   NA
 754822 754823 lpp1466 lpp1467   ala TRUE 0.887 13.000 0.000 1.000 N NA
 754823 754824 lpp1467 lpp1468 ala   TRUE 0.993 4.000 0.155 NA   NA
 754824 754825 lpp1468 lpp1469   lssX TRUE 0.996 0.000 0.219 NA   NA
 754825 754826 lpp1469 lpp1470 lssX lssY TRUE 0.961 10.000 0.003 1.000   NA
 754826 754827 lpp1470 lpp1471 lssY lssZ TRUE 0.504 127.000 0.048 NA   NA
 754827 754828 lpp1471 lpp1472 lssZ lssA TRUE 0.800 55.000 0.080 NA   NA
 754828 754829 lpp1472 lpp1473 lssA lssB FALSE 0.130 90.000 0.000 NA   NA
 754829 754830 lpp1473 lpp1474 lssB lssD TRUE 0.997 4.000 0.447 0.062 N NA
 754830 754831 lpp1474 lpp1475 lssD lssE FALSE 0.158 136.000 0.000 1.000 N NA
 754832 754833 lpp1476 lpp1477 ppt   TRUE 0.760 43.000 0.018 NA   NA
 754833 754834 lpp1477 lpp1478     FALSE 0.039 183.000 0.000 NA   NA
 754835 754836 lpp1479 lpp1480 pilB pilC TRUE 0.998 6.000 0.362 0.013 Y NA
 754836 754837 lpp1480 lpp1481 pilC pilD TRUE 0.967 46.000 0.454 1.000 Y NA
 754838 754839 lpp1482 lpp1483     FALSE 0.109 108.000 0.000 NA   NA
 754839 754840 lpp1483 lpp1484     TRUE 0.717 16.000 0.000 NA   NA
 754842 754843 lpp1486 lpp1487 prpD prpC TRUE 0.996 2.000 0.216 1.000   NA
 754843 754844 lpp1487 lpp1488 prpC   FALSE 0.029 216.000 0.000 1.000   NA
 754844 754845 lpp1488 lpp1489     FALSE 0.176 86.000 0.000 1.000   NA
 754845 754846 lpp1489 lpp1490     TRUE 0.990 -7.000 0.004 1.000 Y NA
 754846 754847 lpp1490 lpp1491   hemL FALSE 0.007 438.000 0.000 1.000 N NA
 754849 754850 lpp1493 lpp1494     TRUE 0.982 3.000 0.008 NA   NA
 754851 754852 lpp1495 lpp1496 pcnB folK TRUE 0.997 -3.000 0.234 1.000 N NA
 754852 754853 lpp1496 lpp1497 folK   TRUE 0.659 55.000 0.003 1.000 N NA
 754854 754855 lpp1498 lpp1499     TRUE 0.994 5.000 0.203 1.000   NA
 754855 754856 lpp1499 lpp1500     TRUE 0.974 25.000 0.492 1.000   NA
 754856 754857 lpp1500 lpp1501   hisS TRUE 0.979 18.000 0.259 1.000   NA
 754857 754858 lpp1501 lpp1502 hisS   TRUE 0.975 -10.000 0.021 1.000   NA
 754858 754859 lpp1502 lpp1503     TRUE 0.968 -25.000 0.153 1.000   NA
 754859 754860 lpp1503 lpp1504     FALSE 0.349 181.000 0.067 1.000   NA
 754860 754861 lpp1504 lpp1505   ndk TRUE 0.964 21.000 0.156 1.000   NA
 754861 754862 lpp1505 lpp1506 ndk   FALSE 0.234 135.000 0.002 NA   NA
 754864 754865 lpp1508 lpp1509     TRUE 0.954 12.000 0.005 NA   NA
 754865 754866 lpp1509 lpp1510     TRUE 0.984 -3.000 0.004 1.000   NA
 754868 754869 lpp1512 lpp1513     FALSE 0.080 161.000 0.000 1.000   NA
 754869 754870 lpp1513 lpp1514   pabB TRUE 0.953 -73.000 0.169 1.000   NA
 754871 754872 lpp1515 lpp1516     TRUE 0.998 -7.000 0.458 0.001 Y NA
 754872 754873 lpp1516 lpp1517     TRUE 0.999 3.000 0.556 0.063 Y NA
 754873 754874 lpp1517 lpp1518     FALSE 0.043 193.000 0.000 1.000   NA
 754874 754875 lpp1518 lpp1519     FALSE 0.063 173.000 0.000 1.000   NA
 754876 754877 lpp1520 lpp1521     FALSE 0.159 78.000 0.000 NA   NA
 754878 754879 lpp1522 lpp1523     TRUE 0.988 3.000 0.014 NA N NA
 754879 754880 lpp1523 lpp1524   thiS TRUE 0.995 -7.000 0.342 1.000 N NA
 754880 754881 lpp1524 lpp1525 thiS thiG TRUE 0.997 3.000 0.064 1.000 Y NA
 754881 754882 lpp1525 lpp1526 thiG thiDE TRUE 0.997 -3.000 0.012 0.002 Y NA
 754882 754883 lpp1526 lpp1527 thiDE   TRUE 0.936 -19.000 0.000 1.000 Y NA
 754884 754885 lpp1528 lpp1529   tolB TRUE 0.981 3.000 0.005 1.000   NA
 754885 754886 lpp1529 lpp1530 tolB   TRUE 0.993 6.000 0.089 0.007   NA
 754886 754887 lpp1530 lpp1531   tolR TRUE 0.996 -3.000 0.183 0.070   NA
 754887 754888 lpp1531 lpp1532 tolR tolQ TRUE 0.998 9.000 0.556 0.040 Y NA
 754888 754889 lpp1532 lpp1533 tolQ   TRUE 0.851 28.000 0.008 1.000   NA
 754889 754890 lpp1533 lpp1534   ruvB TRUE 0.972 4.000 0.002 1.000   NA
 754890 754891 lpp1534 lpp1535 ruvB rpoE FALSE 0.147 147.000 0.000 1.000 N NA
 754891 754892 lpp1535 lpp1536 rpoE   FALSE 0.020 486.000 0.019 NA   NA
 754894 754895 lpp1538 lpp1539     TRUE 0.769 21.000 0.000 1.000 N NA
 754895 754896 lpp1539 lpp1540     FALSE 0.267 52.000 0.000 NA   NA
 754896 754897 lpp1540 lpp1541     TRUE 0.772 -13.000 0.000 NA   NA
 754898 754899 lpp1542 lpp1543 lidK   FALSE 0.006 323.000 0.000 NA   NA
 754899 754900 lpp1543 lpp1544     TRUE 0.997 4.000 0.667 NA   NA
 754900 754901 lpp1544 lpp1545     TRUE 0.543 25.000 0.000 NA   NA
 754902 754903 lpp1546 lpp1547   rplI FALSE 0.026 208.000 0.000 NA   NA
 754903 754904 lpp1547 lpp1548 rplI   TRUE 0.970 13.000 0.034 NA   NA
 754904 754905 lpp1548 lpp1549   rpsR TRUE 0.920 -46.000 0.034 NA   NA
 754905 754906 lpp1549 lpp1550 rpsR rpsF TRUE 0.996 14.000 0.319 0.016 Y NA
 754907 754908 lpp1551 lpp1552     TRUE 0.865 11.000 0.000 1.000   NA
 754909 754910 lpp1553 lpp1554     TRUE 0.683 60.000 0.014 1.000   NA
 754910 754911 lpp1554 lpp1555     TRUE 0.997 -7.000 0.200 1.000 Y NA
 754911 754912 lpp1555 lpp1556     FALSE 0.058 165.000 0.000 NA   NA
 754913 754914 lppt18 lppt19 tRNA-Ser tRNA-Arg TRUE 0.870 7.000 0.000 NA   NA
 754915 754916 lpp1557 lpp1558     FALSE 0.009 276.000 0.000 NA   NA
 754917 754918 lpp1559 lpp1560     FALSE 0.441 30.000 0.000 NA   NA
 754918 754919 lpp1560 lpp1561     FALSE 0.138 87.000 0.000 NA   NA
 754921 754922 lpp1563 lpp1564     TRUE 0.998 -3.000 0.286 1.000 Y NA
 754923 754924 lpp1565 lpp1566     TRUE 0.601 34.000 0.000 0.045   NA
 754924 754925 lpp1566 lpp1567     FALSE 0.247 65.000 0.000 1.000   NA
 754927 754928 lpp1569 lpp1570     TRUE 0.913 2.000 0.000 NA   NA
 754929 754930 lpp1571 lpp1572     FALSE 0.021 238.000 0.000 1.000   NA
 754930 754931 lpp1572 lpp1573     FALSE 0.138 153.000 0.000 1.000 N NA
 754932 754933 lpp1574 lpp1575 proA proB TRUE 0.998 9.000 0.281 0.001 Y NA
 754933 754934 lpp1575 lpp1576 proB   FALSE 0.010 290.000 0.000 1.000   NA
 754935 754936 lpp1577 lpp1578     FALSE 0.056 167.000 0.000 NA   NA
 754937 754938 lpp1579 lpp1580     TRUE 0.610 -34.000 0.000 NA   NA
 754938 754939 lpp1580 lpp1581     FALSE 0.099 119.000 0.000 NA   NA
 754939 754940 lpp1581 lpp1582     FALSE 0.192 208.000 0.000 0.005 Y NA
 754940 754941 lpp1582 lpp1583     FALSE 0.241 66.000 0.000 1.000   NA
 754941 754942 lpp1583 lpp1584     TRUE 0.966 -3.000 0.000 0.014   NA
 754942 754943 lpp1584 lpp1585     TRUE 0.992 4.000 0.100 1.000   NA
 754943 754944 lpp1585 lpp1586     TRUE 0.933 -7.000 0.000 0.082   NA
 754946 754947 lpp1588 lpp1589     TRUE 0.873 50.000 0.034 0.002 N NA
 754947 754948 lpp1589 lpp1590     TRUE 0.986 0.000 0.000 1.000 Y NA
 754948 754949 lpp1590 lpp1591     FALSE 0.051 171.000 0.000 NA   NA
 754949 754950 lpp1591 lpp1592     FALSE 0.052 170.000 0.000 NA   NA
 754950 754951 lpp1592 lpp1593     FALSE 0.083 134.000 0.000 NA   NA
 754953 754954 lpp1595 lpp1596     FALSE 0.017 235.000 0.000 NA   NA
 754956 754957 lpp1598 lpp1599     TRUE 0.996 -6.000 0.550 NA   NA
 754957 754958 lpp1599 lpp1600     TRUE 0.985 -15.000 0.233 1.000   NA
 754958 754959 lpp1600 lpp1601     TRUE 0.994 2.000 0.067 1.000 N NA
 754960 754961 lpp1602 lpp1603     TRUE 0.938 -3.000 0.000 1.000   NA
 754963 754964 lpp1605 lpp1606     FALSE 0.310 54.000 0.000 1.000   NA
 754964 754965 lpp1606 lpp1607     TRUE 0.988 4.000 0.029 1.000   NA
 754965 754966 lpp1607 lpp1608     FALSE 0.119 216.000 0.000 1.000 Y NA
 754969 754970 lpp1611 lpp1612b     FALSE 0.025 210.000 0.000 NA   NA
 754970 754971 lpp1612b lpp1612a     TRUE 0.917 1.000 0.000 NA   NA
 754971 754972 lpp1612a lpp1613   thrC FALSE 0.004 380.000 0.000 NA   NA
 754972 754973 lpp1613 lpp1614 thrC   FALSE 0.072 167.000 0.000 1.000   NA
 754973 754974 lpp1614 lpp1615     FALSE 0.007 301.000 0.000 NA   NA
 754974 754975 lpp1615 lpp1616     FALSE 0.074 147.000 0.000 NA   NA
 754975 754976 lpp1616 lpp1617     TRUE 0.921 0.000 0.000 NA   NA
 754976 754977 lpp1617 lpp1618     TRUE 0.996 4.000 0.500 NA   NA
 754977 754978 lpp1618 lpp1619     TRUE 0.927 28.000 0.133 NA   NA
 754978 754979 lpp1619 lpp1620   iolE FALSE 0.097 122.000 0.000 NA   NA
 754979 754980 lpp1620 lpp1621 iolE iolD TRUE 0.992 3.000 0.035 1.000 N NA
 754980 754981 lpp1621 lpp1622 iolD iolCB TRUE 0.888 39.000 0.064 1.000 N NA
 754981 754982 lpp1622 lpp1623 iolCB iolG TRUE 0.980 8.000 0.014 1.000   NA
 754982 754983 lpp1623 lpp1624 iolG   TRUE 0.765 57.000 0.042 1.000   NA
 754983 754984 lpp1624 lpp1625     FALSE 0.004 452.000 0.000 1.000   NA
 754984 754985 lpp1625 lpp1626     FALSE 0.040 198.000 0.000 1.000   NA
 754985 754986 lpp1626 lpp1627     FALSE 0.370 42.000 0.000 1.000   NA
 754987 754988 lpp1628 lpp1629     TRUE 0.930 -21.000 0.000 1.000 Y NA
 754988 754989 lpp1629 lpp1630     FALSE 0.080 136.000 0.000 NA   NA
 754989 754990 lpp1630 lpp1631     FALSE 0.078 139.000 0.000 NA   NA
 754992 754993 lpp1633 lpp1634     FALSE 0.059 164.000 0.000 NA   NA
 754996 754997 lpp1637 lpp1638     FALSE 0.080 161.000 0.000 1.000   NA
 754997 754998 lpp1638 lpp1639     FALSE 0.050 172.000 0.000 NA   NA
 755001 755002 lpp1642 lpp1643     FALSE 0.111 104.000 0.000 NA   NA
 755003 755004 lpp1644 lpp1645 purN purD TRUE 0.997 -3.000 0.039 1.000 Y NA
 755004 755005 lpp1645 lpp1646 purD purF TRUE 0.997 -3.000 0.016 0.001 Y NA
 755005 755006 lpp1646 lpp1647 purF purC TRUE 0.951 23.000 0.004 1.000 Y NA
 755006 755007 lpp1647 lpp1648 purC purQ TRUE 0.960 23.000 0.008 1.000 Y NA
 755007 755008 lpp1648 lpp1649 purQ purM TRUE 0.996 0.000 0.004 0.002 Y NA
 755008 755009 lpp1649 lpp1650 purM purL TRUE 0.996 0.000 0.004 0.002 Y NA
 755009 755010 lpp1650 lpp1651 purL   FALSE 0.069 153.000 0.000 NA   NA
 755010 755011 lpp1651 lpp1652     FALSE 0.180 71.000 0.000 NA   NA
 755011 755012 lpp1652 lpp1653     FALSE 0.007 302.000 0.000 NA   NA
 755012 755013 lpp1653 lpp1654     TRUE 0.794 128.000 1.000 NA   NA
 755013 755014 lpp1654 lpp1655     FALSE 0.120 97.000 0.000 NA   NA
 755014 755015 lpp1655 lpp1656     FALSE 0.002 544.000 0.000 NA   NA
 755015 755016 lpp1656 lpp1657     FALSE 0.363 37.000 0.000 NA   NA
 755017 755018 lpp1658 lpp1659   acnA FALSE 0.428 85.000 0.004 NA   NA
 755018 755019 lpp1659 lpp1660 acnA   FALSE 0.022 265.000 0.000 1.000 N NA
 755021 755022 lpp1662 lpp1663     FALSE 0.003 432.000 0.000 NA   NA
 755023 755024 lpp1664 lpp1665 ubiG   TRUE 0.954 -13.000 0.004 NA N NA
 755025 755026 lpp1666 lpp1667     FALSE 0.080 136.000 0.000 NA   NA
 755027 755028 lpp1668 lpp1669 umuC umuD TRUE 0.962 0.000 0.000 1.000 N NA
 755029 755030 lpp1670 lpp1671   astA TRUE 0.996 0.000 0.032 1.000 Y NA
 755030 755031 lpp1671 lpp1672 astA astD TRUE 0.989 14.000 0.286 1.000 N NA
 755031 755032 lpp1672 lpp1673 astD astB TRUE 0.990 6.000 0.045 1.000 N NA
 755032 755033 lpp1673 lpp1674 astB   TRUE 0.850 12.000 0.000 1.000   NA
 755034 755035 lpp1675 lpp1676   rrf FALSE 0.004 422.000 0.000 1.000   NA
 755035 755036 lpp1676 lpp1677 rrf pyrH TRUE 0.960 -10.000 0.002 1.000 N NA
 755036 755037 lpp1677 lpp1678 pyrH tsf TRUE 0.984 -3.000 0.002 1.000 N NA
 755037 755038 lpp1678 lpp1679 tsf rpsB TRUE 0.955 66.000 0.748 1.000 Y NA
 755039 755040 lpp1680 lpp1681     FALSE 0.003 522.000 0.000 NA   NA
 755041 755042 lpp1682 lpp1683     FALSE 0.004 391.000 0.000 NA   NA
 755043 755044 lpp1684 lpp1685   glnD TRUE 0.987 -13.000 0.167 1.000 N NA
 755045 755046 lpp1686 lpp1687   guaA TRUE 0.991 -9.000 0.019 1.000 Y NA
 755046 755047 lpp1687 lpp1688 guaA guaB TRUE 0.996 3.000 0.190 0.001   NA
 755048 755049 lpp1689 lpp1690 minD minE TRUE 0.999 -3.000 0.618 NA Y NA
 755050 755051 lpp1691 lpp1692     TRUE 0.570 93.000 0.029 1.000   NA
 755051 755052 lpp1692 lpp1693     TRUE 0.990 -3.000 0.029 NA   NA
 755052 755053 lpp1693 lpp1694     TRUE 0.960 -40.000 0.182 NA   NA
 755053 755054 lpp1694 lpp1695     TRUE 0.998 0.000 0.182 0.031 Y NA
 755054 755055 lpp1695 lpp1696     TRUE 0.997 -3.000 0.018 0.031 Y NA
 755057 755058 lpp1698 lpp1699 clcA trpE TRUE 0.987 -7.000 0.028 1.000 N NA
 755059 755060 lpp1700 lpp1701 gatC gatA TRUE 0.999 3.000 0.643 0.001 Y NA
 755060 755061 lpp1701 lpp1702 gatA gatB TRUE 0.999 4.000 0.492 0.001 Y NA
 755061 755062 lpp1702 lpp1703 gatB   FALSE 0.030 214.000 0.000 1.000   NA
 755062 755063 lpp1703 lpp1704     FALSE 0.407 169.000 0.062 1.000   NA
 755063 755064 lpp1704 lpp1705     FALSE 0.326 40.000 0.000 NA   NA
 755064 755065 lpp1705 lpp1706     TRUE 0.622 20.000 0.000 NA   NA
 755066 755067 lpps01 lpp1707     FALSE 0.071 151.000 0.000 NA   NA
 755067 755068 lpp1707 lpp1708     FALSE 0.004 395.000 0.000 NA   NA
 755068 755069 lpp1708 lpp1709     TRUE 0.984 5.000 0.024 NA   NA
 755069 755070 lpp1709 lpp1710   IscS TRUE 0.988 -3.000 0.011 1.000   NA
 755070 755071 lpp1710 lpp1711 IscS   TRUE 0.936 -25.000 0.007 1.000 N NA
 755075 755076 lpp1715 lpp1716     TRUE 0.993 13.000 1.000 NA   NA
 755076 755077 lpp1716 lpp1717   mpl FALSE 0.005 332.000 0.000 NA   NA
 755077 755078 lpp1717 lpp1718 mpl   TRUE 0.982 2.000 0.007 NA   NA
 755078 755079 lpp1718 lpp1719     TRUE 0.679 53.000 0.009 NA   NA
 755079 755080 lpp1719 lpp1720   fliJ TRUE 0.820 -10.000 0.000 NA   NA
 755080 755081 lpp1720 lpp1721 fliJ fliI TRUE 0.998 -3.000 0.044 0.007 Y NA
 755081 755082 lpp1721 lpp1722 fliI fliH TRUE 0.989 3.000 0.000 0.003 Y NA
 755082 755083 lpp1722 lpp1723 fliH fliG FALSE 0.428 142.000 0.000 0.003 Y NA
 755083 755084 lpp1723 lpp1724 fliG fliF TRUE 0.998 3.000 0.189 0.006 Y NA
 755084 755085 lpp1724 lpp1725 fliF fliE TRUE 0.864 173.000 0.910 0.006 Y NA
 755085 755086 lpp1725 lpp1726 fliE fleR TRUE 0.990 15.000 0.446 1.000 N NA
 755086 755087 lpp1726 lpp1727 fleR fleS TRUE 0.993 24.000 0.679 0.033 Y NA
 755087 755088 lpp1727 lpp1728 fleS   FALSE 0.023 299.000 0.000 0.081 N NA
 755088 755089 lpp1728 lpp1729     TRUE 0.983 16.000 0.167 1.000 N NA
 755089 755090 lpp1729 lpp1730   ftsK TRUE 0.997 3.000 0.305 1.000 N NA
 755091 755092 lpp1731 lpp1732 trxB aat TRUE 0.996 3.000 0.046 1.000 Y NA
 755092 755093 lpp1732 lpp1733 aat   FALSE 0.312 64.000 0.000 NA N NA
 755093 755094 lpp1733 lpp1734   infA FALSE 0.141 132.000 0.000 NA N NA
 755096 755097 lpp1736 lpp1737     FALSE 0.013 250.000 0.000 NA   NA
 755097 755098 lpp1737 lpp1738   rir1 FALSE 0.010 272.000 0.000 NA   NA
 755098 755099 lpp1738 lpp1739 rir1 rir2 TRUE 0.997 14.000 0.564 0.001 Y NA
 755099 755100 lpp1739 lpp1740 rir2   FALSE 0.006 314.000 0.000 NA   NA
 755101 755102 lpp1741 lpp1742 lysS prfB TRUE 0.998 -3.000 0.162 0.037 Y NA
 755102 755103 lpp1742 lpp1743 prfB   FALSE 0.064 160.000 0.000 NA   NA
 755103 755104 lpp1743 lpp1744   motB TRUE 0.990 -3.000 0.030 NA   NA
 755104 755105 lpp1744 lpp1745 motB motA TRUE 0.986 -43.000 0.248 1.000 Y NA
 755105 755106 lpp1745 lpp1746 motA fliA TRUE 0.992 10.000 0.089 0.022 N NA
 755106 755107 lpp1746 lpp1747 fliA fleN TRUE 0.839 97.000 0.482 1.000 N NA
 755107 755108 lpp1747 lpp1748 fleN flhF TRUE 0.989 -13.000 0.241 1.000 N NA
 755108 755109 lpp1748 lpp1749 flhF flhA TRUE 0.953 41.000 0.178 1.000 Y NA
 755109 755110 lpp1749 lpp1750 flhA flhB TRUE 0.999 -3.000 0.205 0.010 Y NA
 755110 755111 lpp1750 lpp1751 flhB fliR TRUE 0.996 0.000 0.018 1.000 Y NA
 755111 755112 lpp1751 lpp1752 fliR fliQ TRUE 0.987 4.000 0.000 0.002 Y NA
 755112 755113 lpp1752 lpp1753 fliQ fliP TRUE 0.981 9.000 0.000 0.010 Y NA
 755113 755114 lpp1753 lpp1754 fliP fliO TRUE 0.985 1.000 0.000 1.000 Y NA
 755114 755115 lpp1754 lpp1755 fliO fliN TRUE 0.997 -3.000 0.443 1.000   NA
 755115 755116 lpp1755 lpp1756 fliN fliM TRUE 0.986 10.000 0.020 0.001   NA
 755116 755117 lpp1756 lpp1757 fliM   FALSE 0.003 445.000 0.000 NA   NA
 755118 755119 lpp1758 lpp1759     TRUE 0.997 -3.000 0.250 0.031   NA
 755119 755120 lpp1759 lpp1760     FALSE 0.126 119.000 0.000 1.000   NA
 755121 755122 lpp1761 lpp1762     FALSE 0.016 237.000 0.000 NA   NA
 755122 755123 lpp1762 lpp1763   alaS FALSE 0.157 79.000 0.000 NA   NA
 755123 755124 lpp1763 lpp1764 alaS recX TRUE 0.965 18.000 0.085 1.000   NA
 755124 755125 lpp1764 lpp1765 recX recA TRUE 0.994 -7.000 0.296 1.000   NA
 755125 755126 lpp1765 lpp1766 recA   FALSE 0.007 303.000 0.000 NA   NA
 755126 755127 lpp1766 lpp1767     FALSE 0.008 294.000 0.000 NA   NA
 755128 755129 lpp1768 lpp1769 mutS   TRUE 0.966 13.000 0.003 0.037 N NA
 755129 755130 lpp1769 lpp1770     TRUE 0.997 -3.000 0.575 NA   NA
 755130 755131 lpp1770 lpp1771   hemB TRUE 0.802 34.000 0.009 NA   NA
 755131 755132 lpp1771 lpp1772 hemB   FALSE 0.079 137.000 0.000 NA   NA
 755134 755135 lpp1774 lpp1775 lysAC   TRUE 0.984 5.000 0.008 1.000 N NA
 755135 755136 lpp1775 lpp1776     FALSE 0.055 208.000 0.000 1.000 N NA
 755136 755137 lpp1776 lpp1777     FALSE 0.379 116.000 0.007 NA   NA
 755140 755141 lpp1780 lpp1781   lpxK TRUE 0.971 5.000 0.004 NA   NA
 755141 755142 lpp1781 lpp1782 lpxK msbA TRUE 0.997 0.000 0.205 1.000 N NA
 755142 755143 lpp1782 lpp1783 msbA   FALSE 0.173 87.000 0.000 1.000   NA
 755143 755144 lpp1783 lpp1784   pyrD TRUE 0.876 21.000 0.003 1.000   NA
 755144 755145 lpp1784 lpp1785 pyrD   FALSE 0.008 286.000 0.000 NA   NA
 755145 755146 lpp1785 lpp1786     FALSE 0.283 49.000 0.000 NA   NA
 755147 755148 lpp1787 lpp1788     TRUE 0.986 12.000 0.007 1.000 Y NA
 755148 755149 lpp1788 lpp1789     FALSE 0.085 132.000 0.000 NA   NA
 755149 755150 lpp1789 lpp1790     TRUE 0.966 10.000 0.006 NA   NA
 755150 755151 lpp1790 lpp1791     TRUE 0.992 -16.000 0.189 1.000 Y NA
 755151 755152 lpp1791 lpp1792     TRUE 0.995 -7.000 0.027 0.061 Y NA
 755152 755153 lpp1792 lpp1793     TRUE 0.991 11.000 0.105 0.061 N NA
 755153 755154 lpp1793 lpp1794     TRUE 0.509 157.000 0.024 0.061 N NA
 755156 755157 lpp1796 lpp1797     TRUE 0.994 -22.000 0.584 1.000 Y NA
 755157 755158 lpp1797 lpp1798     TRUE 0.988 13.000 0.036 NA Y NA
 755158 755159 lpp1798 lpp1799     FALSE 0.154 80.000 0.000 NA   NA
 755159 755160 lpp1799 lpp1800     FALSE 0.006 326.000 0.000 NA   NA
 755161 755162 lpp1801 lpp1802     TRUE 0.906 3.000 0.000 NA   NA
 755162 755163 lpp1802 lpp1803   glyS TRUE 0.993 6.000 0.123 1.000 N NA
 755163 755164 lpp1803 lpp1804 glyS glyQ TRUE 0.998 -10.000 0.651 0.001 Y NA
 755164 755165 lpp1804 lpp1805 glyQ   FALSE 0.035 235.000 0.000 1.000 N NA
 755165 755166 lpp1805 lpp1806   uvrD FALSE 0.055 208.000 0.000 1.000 N NA
 755167 755168 lpp1807 lpp1808     TRUE 0.987 -6.000 0.010 0.037   NA
 755168 755169 lpp1808 lpp1809     FALSE 0.044 218.000 0.000 1.000 N NA
 755170 755171 lpp1810 lpp1811 gshB   TRUE 0.995 0.000 0.120 1.000   NA
 755171 755172 lpp1811 lpp1812     FALSE 0.084 159.000 0.000 1.000   NA
 755172 755173 lpp1812 lpp1813     TRUE 0.584 26.000 0.000 1.000   NA
 755174 755175 lpp1814 lpp1815     FALSE 0.134 89.000 0.000 NA   NA
 755175 755176 lpp1815 lpp1816     TRUE 0.896 4.000 0.000 NA   NA
 755176 755177 lpp1816 lpp1817     TRUE 0.830 38.000 0.035 NA   NA
 755179 755180 lpp1819 lpp1820   udk TRUE 0.895 -7.000 0.000 1.000   NA
 755180 755181 lpp1820 lpp1821 udk fabI TRUE 0.527 96.000 0.007 1.000 N NA
 755184 755185 lpp1824 lpp1825     FALSE 0.002 573.000 0.000 NA   NA
 755185 755186 lpp1825 lppt20   tRNA-Asp FALSE 0.126 92.000 0.000 NA   NA
 755186 755188 lppt20 lpp1826 tRNA-Asp hubB TRUE 0.913 2.000 0.000 NA   NA
 755188 755187 lpp1826 lppt21 hubB tRNA-Val TRUE 0.521 -80.000 0.000 NA   NA
 755187 755189 lppt21 lpp1827 tRNA-Val lon FALSE 0.003 415.000 0.000 NA   NA
 755189 755190 lpp1827 lpp1828 lon clpX FALSE 0.495 234.000 0.201 0.080 Y NA
 755190 755191 lpp1828 lpp1829 clpX clpP TRUE 0.841 141.000 0.352 1.000 Y NA
 755191 755192 lpp1829 lpp1830 clpP tig TRUE 0.993 3.000 0.005 1.000 Y NA
 755192 755193 lpp1830 lppt22 tig tRNA-Leu FALSE 0.441 30.000 0.000 NA   NA
 755193 755194 lppt22 lppt23 tRNA-Leu tRNA-His FALSE 0.128 91.000 0.000 NA   NA
 755194 755195 lppt23 lppt24 tRNA-His tRNA-Arg FALSE 0.063 161.000 0.000 NA   NA
 755198 755199 lpp1832 lpp1833     TRUE 0.543 123.000 0.047 1.000   NA
 755200 755201 lpp1834 lpp1835 rnc   TRUE 0.968 -10.000 0.013 NA   NA
 755201 755202 lpp1835 lpp1836   lepB TRUE 0.979 12.000 0.053 NA   NA
 755202 755203 lpp1836 lpp1837 lepB   TRUE 0.744 108.000 0.187 1.000 N NA
 755204 755205 lpp1838 lpp1839     TRUE 0.633 75.000 0.012 NA N NA
 755205 755206 lpp1839 lpp1840     TRUE 0.999 -3.000 0.811 1.000 Y NA
 755208 755209 lpp1842 lpp1843     FALSE 0.138 87.000 0.000 NA   NA
 755210 755211 lppt26 lppt27 tRNA-Glu tRNA-Glu FALSE 0.235 57.000 0.000 NA   NA
 755211 755212 lppt27 lppt28 tRNA-Glu tRNA-Ala FALSE 0.336 39.000 0.000 NA   NA
 755214 755215 lpp1845 lpp1846     FALSE 0.180 71.000 0.000 NA   NA
 755216 755217 lpp1847 lpp1848     FALSE 0.016 237.000 0.000 NA   NA
 755217 755218 lpp1848 lpp1849     FALSE 0.006 322.000 0.000 NA   NA
 755220 755221 lpp1851 lpp1852     TRUE 0.584 26.000 0.000 1.000   NA
 755227 755228 lpp1858 lpp1859     FALSE 0.255 54.000 0.000 NA   NA
 755231 755232 lpp1862 lpp1863     FALSE 0.016 238.000 0.000 NA   NA
 755233 755234 lpp1864 lpp1865     FALSE 0.010 264.000 0.000 NA   NA
 755234 755235 lpp1865 lpp1866     TRUE 0.982 20.000 0.667 NA   NA
 755236 755237 lpp1867 lpp1868     TRUE 0.597 -39.000 0.000 NA   NA
 755240 755241 lpp1871 lpp1872     TRUE 0.998 -3.000 0.739 NA   NA
 755241 755242 lpp1872 lpp1873     TRUE 0.998 0.000 0.727 NA   NA
 755242 755243 lpp1873 lpp1874     FALSE 0.148 82.000 0.000 NA   NA
 755243 755244 lpp1874 lpp1875     FALSE 0.109 108.000 0.000 NA   NA
 755244 755245 lpp1875 lpp1876     FALSE 0.003 436.000 0.000 NA   NA
 755246 755247 lpp1877 lpp1878     FALSE 0.018 227.000 0.000 NA   NA
 755247 755248 lpp1878 lpp1879     FALSE 0.009 275.000 0.000 NA   NA
 755250 755251 lpp1881 lpp1882     TRUE 0.831 11.000 0.000 NA   NA
 755251 755252 lpp1882 lpp1883   gst FALSE 0.007 327.000 0.000 1.000   NA
 755252 755253 lpp1883 lpp1884 gst   FALSE 0.262 197.000 0.062 NA   NA
 755253 755254 lpp1884 lpp1885     TRUE 0.940 41.000 0.667 NA   NA
 755254 755255 lpp1885 lpp1886   gltX FALSE 0.028 247.000 0.000 1.000 N NA
 755256 755257 lpp1887 lpp1888 gacS/letS pfp FALSE 0.223 98.000 0.000 1.000 N NA
 755258 755259 lpp1889 lpp1890     FALSE 0.241 194.000 0.000 0.001 Y NA
 755260 755261 lpp1891 lpp1892     FALSE 0.266 75.000 0.000 NA N NA
 755262 755263 lpp1893 lpp1894   kdsB FALSE 0.017 248.000 0.000 1.000   NA
 755263 755264 lpp1894 lpp1895 kdsB   TRUE 0.996 -3.000 0.265 NA   NA
 755264 755265 lpp1895 lpp1896     TRUE 0.963 -7.000 0.003 NA   NA
 755265 755266 lpp1896 lpp1897     TRUE 0.972 -22.000 0.082 1.000 N NA
 755266 755267 lpp1897 lpp1898     TRUE 0.968 -12.000 0.006 1.000 N NA
 755268 755269 lpp1899 lpp1900     FALSE 0.007 304.000 0.000 NA   NA
 755269 755270 lpp1900 lpp1901     TRUE 0.838 76.000 0.400 NA   NA
 755270 755271 lpp1901 lpp1902     TRUE 0.536 76.000 0.009 NA   NA
 755271 755272 lpp1902 lpp1903     TRUE 0.885 12.000 0.000 NA N NA
 755272 755273 lpp1903 lppt29   tRNA-Phe FALSE 0.273 51.000 0.000 NA   NA
 755273 755274 lppt29 lpp1904 tRNA-Phe   FALSE 0.134 89.000 0.000 NA   NA
 755274 755275 lpp1904 lpp1905     FALSE 0.003 433.000 0.000 NA   NA
 755277 755278 lpp1907 lpp1908     TRUE 0.563 -48.000 0.000 NA   NA
 755280 755281 lpp1910 lpp1911     FALSE 0.004 403.000 0.000 NA   NA
 755284 755285 lpp1914 lpp1915     FALSE 0.072 150.000 0.000 NA   NA
 755285 755286 lpp1915 lpp1916     TRUE 0.991 -13.000 0.652 NA   NA
 755286 755287 lpp1916 lpp1917     FALSE 0.020 240.000 0.000 1.000   NA
 755287 755288 lpp1917 lpp1918     TRUE 0.992 15.000 1.000 1.000   NA
 755290 755291 lpp1920 lpp1921     FALSE 0.067 170.000 0.000 1.000   NA
 755291 755292 lpp1921 lpp1922     TRUE 0.828 17.000 0.000 1.000 N NA
 755292 755293 lpp1922 lpp1923     TRUE 0.572 70.000 0.000 1.000 Y NA
 755293 755294 lpp1923 lpp1924     TRUE 0.824 109.000 0.750 1.000   NA
 755296 755297 lpp1926 lpp1927     FALSE 0.211 105.000 0.000 1.000 N NA
 755297 755298 lpp1927 lpp1928     FALSE 0.010 266.000 0.000 NA   NA
 755298 755299 lpp1928 lpp1929     TRUE 0.797 -12.000 0.000 NA   NA
 755302 755303 lpp1932 lpp1933 ralF   FALSE 0.003 496.000 0.000 1.000   NA
 755303 755304 lpp1933 lpp1934     TRUE 0.568 179.000 0.446 1.000   NA
 755305 755306 lpp1935 lpp1936     FALSE 0.003 440.000 0.000 NA   NA
 755306 755307 lpp1936 lpp1937     FALSE 0.014 246.000 0.000 NA   NA
 755307 755308 lpp1937 lpp1938     TRUE 0.921 0.000 0.000 NA   NA
 755309 755310 lpp1939 lpp1940     FALSE 0.005 341.000 0.000 NA   NA
 755310 755311 lpp1940 lpp1941     FALSE 0.010 264.000 0.000 NA   NA
 755311 755312 lpp1941 lpp1942     FALSE 0.038 184.000 0.000 NA   NA
 755313 755314 lpp1943 lpp1944     FALSE 0.063 161.000 0.000 NA   NA
 755314 755315 lpp1944 lpp1945     TRUE 0.584 26.000 0.000 1.000   NA
 755317 755318 lpp1947 lpp1948     FALSE 0.005 336.000 0.000 NA   NA
 755319 755320 lpp1949 lpp1950     FALSE 0.449 149.000 0.050 NA   NA
 755321 755322 lpp1951 lpp1952     FALSE 0.003 417.000 0.000 NA   NA
 755322 755323 lpp1952 lpp1953     FALSE 0.003 435.000 0.000 NA   NA
 755323 755324 lpp1953 lpp1954     TRUE 0.794 35.000 0.000 1.000 Y NA
 755324 755325 lpp1954 lpp1955     FALSE 0.018 227.000 0.000 NA   NA
 755326 755327 lpp1956 lpp1957     FALSE 0.003 453.000 0.000 NA   NA
 755327 755328 lpp1957 lpp1958     FALSE 0.003 469.000 0.000 NA   NA
 755328 755329 lpp1958 lpp1959     FALSE 0.004 365.000 0.000 NA   NA
 755329 755330 lpp1959 lpp1960     FALSE 0.045 177.000 0.000 NA   NA
 755332 755333 lpp1962 lpp1963     FALSE 0.130 90.000 0.000 NA   NA
 755333 755334 lpp1963 lpp1964     FALSE 0.038 184.000 0.000 NA   NA
 755334 755335 lpp1964 lpp1965     TRUE 0.622 20.000 0.000 NA   NA
 755336 755337 lpp1966 lpp1967     FALSE 0.040 182.000 0.000 NA   NA
 755337 755338 lpp1967 lpp1968     FALSE 0.022 216.000 0.000 NA   NA
 755339 755340 lpp1969 lpp1970     FALSE 0.116 99.000 0.000 NA   NA
 755341 755342 lpp1971 lpp1972     FALSE 0.028 204.000 0.000 NA   NA
 755342 755343 lpp1972 lpp1973     FALSE 0.154 80.000 0.000 NA   NA
 755345 755346 lpp1975 lpp1976 mltA   FALSE 0.108 109.000 0.000 NA   NA
 755346 755347 lpp1976 lpp1977     TRUE 0.998 -3.000 1.000 NA   NA
 755347 755348 lpp1977 lpp1978     TRUE 0.979 -61.000 1.000 NA   NA
 755349 755350 lpp1979 lpp1980 hisC   TRUE 0.827 37.000 0.008 1.000 N NA
 755351 755352 lpp1981 lpp1982 secF secD TRUE 0.992 13.000 0.030 0.002 Y NA
 755352 755353 lpp1982 lpp1983 secD   TRUE 0.956 22.000 0.007 NA Y NA
 755353 755354 lpp1983 lpp1984     TRUE 0.701 146.000 0.325 NA N NA
 755354 755355 lpp1984 lpp1985   queA TRUE 0.974 47.000 0.360 0.001 Y NA
 755355 755356 lpp1985 lpp1986 queA   FALSE 0.102 115.000 0.000 NA   NA
 755356 755357 lpp1986 lpp1987     FALSE 0.450 82.000 0.005 NA   NA
 755357 755358 lpp1987 lpp1988     FALSE 0.263 61.000 0.000 1.000   NA
 755358 755359 lpp1988 lpp1989     TRUE 0.906 3.000 0.000 NA   NA
 755359 755360 lpp1989 lpp1990   spoT TRUE 0.996 0.000 0.215 NA N NA
 755360 755361 lpp1990 lpp1991 spoT rpoZ TRUE 0.767 168.000 0.291 1.000 Y NA
 755361 755362 lpp1991 lpp1992 rpoZ gmk TRUE 0.935 51.000 0.471 1.000 N NA
 755362 755363 lpp1992 lpp1993 gmk   TRUE 0.994 6.000 0.276 NA   NA
 755366 755367 lpp1996 lpp1997   proC TRUE 0.995 0.000 0.158 NA   NA
 755367 755368 lpp1997 lpp1998 proC   FALSE 0.075 344.000 0.152 1.000   NA
 755368 755369 lpp1998 lpp1999     TRUE 0.663 48.000 0.005 NA   NA
 755369 755370 lpp1999 lpp2000     TRUE 0.756 14.000 0.000 NA   NA
 755371 755372 lpp2001 lpp2002     FALSE 0.166 132.000 0.000 1.000 N NA
 755372 755373 lpp2002 lpp2003   sahH FALSE 0.183 124.000 0.000 1.000 N NA
 755373 755374 lpp2003 lpp2004 sahH metK TRUE 0.989 19.000 0.114 0.001 Y NA
 755374 755375 lpp2004 lpp2005 metK carA FALSE 0.076 209.000 0.000 0.078 N NA
 755375 755376 lpp2005 lpp2006 carA dnaJ TRUE 0.505 96.000 0.002 0.078 N NA
 755376 755377 lpp2006 lpp2007 dnaJ dnaK TRUE 0.719 189.000 0.236 0.003 Y NA
 755377 755378 lpp2007 lpp2008 dnaK grpE TRUE 0.755 145.000 0.049 0.005 Y NA
 755382 755383 lpp2012 lpp2013   argS TRUE 0.989 0.000 0.008 NA N NA
 755383 755384 lpp2013 lpp2014 argS   FALSE 0.111 104.000 0.000 NA   NA
 755387 755388 lpp2017 lpp2018     TRUE 0.650 116.000 0.074 0.065   NA
 755388 755389 lpp2018 lpp2019     TRUE 0.968 -7.000 0.004 NA   NA
 755389 755390 lpp2019 lpp2020   eno TRUE 0.801 32.000 0.003 NA N NA
 755390 755391 lpp2020 lpp2021 eno   FALSE 0.357 222.000 0.241 1.000 N NA
 755392 755393 lpp2022 lpp2023     TRUE 0.994 -13.000 0.087 0.002 Y NA
 755393 755394 lpp2023 lpp2024     TRUE 0.809 18.000 0.000 1.000 N NA
 755394 755395 lpp2024 lpp2025     TRUE 0.993 -3.000 0.059 1.000   NA
 755395 755396 lpp2025 lpp2026   pal TRUE 0.996 -3.000 0.278 1.000   NA
 755396 755397 lpp2026 lpp2027 pal   FALSE 0.409 98.000 0.006 NA   NA
 755397 755398 lpp2027 lpp2028     TRUE 0.994 4.000 0.239 NA   NA
 755398 755399 lpp2028 lpp2029     TRUE 0.954 30.000 0.054 NA Y NA
 755399 755400 lpp2029 lpp2030     TRUE 0.999 1.000 0.556 NA Y NA
 755401 755402 lpp2031 lpp2032     FALSE 0.091 127.000 0.000 NA   NA
 755404 755405 lpp2034 lpp2035     TRUE 0.987 -9.000 0.053 1.000 N NA
 755405 755406 lpp2035 lpp2036     TRUE 0.920 -3.000 0.000 NA   NA
 755406 755407 lpp2036 lppt30   tRNA-Lys FALSE 0.138 87.000 0.000 NA   NA
 755407 755408 lppt30 lppt31 tRNA-Lys tRNA-Lys FALSE 0.242 56.000 0.000 NA   NA
 755408 755409 lppt31 lppt32 tRNA-Lys tRNA-Arg FALSE 0.214 61.000 0.000 NA   NA
 755410 755411 lpp2037 lpp2038     FALSE 0.343 66.000 0.000 1.000 N NA
 755414 755415 lpp2041 lpp2042   dbpA FALSE 0.085 240.000 0.000 1.000 Y NA
 755415 755416 lpp2042 lpp2043 dbpA   FALSE 0.387 157.000 0.010 1.000 N NA
 755417 755418 lpp2044 lpp2045     TRUE 0.981 16.000 0.250 NA   NA
 755418 755419 lpp2045 lpp2046     TRUE 0.593 34.000 0.000 1.000 N NA
 755423 755424 lpp2050 lpp2051     FALSE 0.029 201.000 0.000 NA   NA
 755424 755425 lpp2051 lpp2052     TRUE 0.584 26.000 0.000 1.000   NA
 755425 755426 lpp2052 lpp2053     FALSE 0.040 182.000 0.000 NA   NA
 755428 755429 lpp2055 lpp2056     FALSE 0.033 209.000 0.000 1.000   NA
 755430 755431 lpp2057 lpp2058     FALSE 0.075 145.000 0.000 NA   NA
 755431 755432 lpp2058 lpp2059     FALSE 0.003 498.000 0.000 NA   NA
 755432 755433 lpp2059 lpp2060     FALSE 0.008 299.000 0.000 NA   NA
 755434 755435 lpp2061 lpp2062     FALSE 0.021 219.000 0.000 NA   NA
 755435 755436 lpp2062 lpp2063     FALSE 0.006 324.000 0.000 NA   NA
 755436 755437 lpp2063 lpp2064     TRUE 0.794 50.000 0.021 NA N NA
 755442 755443 lpp2069 lpp2070     TRUE 0.543 25.000 0.000 NA   NA
 755446 755447 lpp2073 lpp2074 ceaA ceaB TRUE 0.935 1.000 0.000 1.000   NA
 755447 755448 lpp2074 lpp2075 ceaB ceaC TRUE 0.938 -3.000 0.000 1.000   NA
 755448 755449 lpp2075 lpp2076 ceaC   FALSE 0.006 359.000 0.000 1.000   NA
 755451 755452 lpp2078 lpp2079     FALSE 0.139 134.000 0.000 NA N NA
 755456 755457 lpp2083 lpp2084   stuC TRUE 0.975 -10.000 0.000 0.006 Y NA
 755458 755459 lpp2085 lpp2086     FALSE 0.003 465.000 0.000 NA   NA
 755459 755460 lpp2086 lpp2087     FALSE 0.120 97.000 0.000 NA   NA
 755460 755461 lpp2087 lpp2088     FALSE 0.136 88.000 0.000 NA   NA
 755461 755462 lpp2088 lpp2089     FALSE 0.017 234.000 0.000 NA   NA
 755462 755463 lpp2089 lpp2090     FALSE 0.070 152.000 0.000 NA   NA
 755463 755464 lpp2090 lpp2091     FALSE 0.084 133.000 0.000 NA   NA
 755464 755465 lpp2091 lpp2092   sdeC FALSE 0.014 288.000 0.000 NA N NA
 755465 755466 lpp2092 lpp2093 sdeC   FALSE 0.023 214.000 0.000 NA   NA
 755466 755467 lpp2093 lpp2094     TRUE 0.933 53.000 1.000 NA   NA
 755467 755468 lpp2094 lpp2095   sdeB FALSE 0.009 280.000 0.000 NA   NA
 755468 755469 lpp2095 lpp2096 sdeB sdeA FALSE 0.004 371.000 0.000 NA   NA
 755469 755470 lpp2096 lpp2097 sdeA   FALSE 0.004 483.000 0.000 1.000   NA
 755471 755472 lpp2098 lpp2099     FALSE 0.008 286.000 0.000 NA   NA
 755473 755474 lpp2100 lpp2101     FALSE 0.047 176.000 0.000 NA   NA
 755476 755477 lpp2103 lpp2104     FALSE 0.082 135.000 0.000 NA   NA
 755478 755479 lpp2105 lpp2106     TRUE 0.913 2.000 0.000 NA   NA
 755480 755481 lpp2107 lpp2108     FALSE 0.066 157.000 0.000 NA   NA
 755481 755482 lpp2108 lpp2109     FALSE 0.042 223.000 0.000 0.058   NA
 755484 755485 lpp2111 lpp2112     TRUE 0.812 12.000 0.000 NA   NA
 755486 755487 lpp2113 lpp2114     FALSE 0.157 79.000 0.000 NA   NA
 755487 755488 lpp2114 lpp2115     TRUE 0.860 9.000 0.000 NA   NA
 755490 755491 lpp2117 lpp2118     TRUE 0.913 2.000 0.000 NA   NA
 755491 755492 lpp2118 lpp2119     TRUE 0.772 -13.000 0.000 NA   NA
 755492 755493 lpp2119 lpp2120     TRUE 0.772 -13.000 0.000 NA   NA
 755493 755494 lpp2120 lpp2121     TRUE 0.906 3.000 0.000 NA   NA
 755494 755495 lpp2121 lpp2122     FALSE 0.102 115.000 0.000 NA   NA
 755495 755496 lpp2122 lpp2123     TRUE 0.896 4.000 0.000 NA   NA
 755496 755497 lpp2123 lpp2124     FALSE 0.003 469.000 0.000 NA   NA
 755497 755498 lpp2124 lpp2125     FALSE 0.109 108.000 0.000 NA   NA
 755498 755499 lpp2125 lpp2126     TRUE 0.663 18.000 0.000 NA   NA
 755499 755500 lpp2126 lppt33   tRNA-Lys FALSE 0.036 187.000 0.000 NA   NA
 755503 755504 lpp2129 lpp2130     TRUE 0.684 100.000 0.080 1.000 N NA
 755504 755505 lpp2130 lpp2131     FALSE 0.122 162.000 0.000 1.000 N NA
 755505 755506 lpp2131 lpp2132     FALSE 0.189 121.000 0.000 1.000 N NA
 755506 755507 lpp2132 lpp2133     FALSE 0.313 172.000 0.000 0.006 Y NA
 755507 755508 lpp2133 lpp2134     FALSE 0.011 282.000 0.000 1.000   NA
 755508 755509 lpp2134 lpp2135     TRUE 0.608 25.000 0.000 1.000   NA
 755509 755510 lpp2135 lpp2136     FALSE 0.015 258.000 0.000 1.000   NA
 755511 755512 lpp2137 lpp2138     FALSE 0.018 227.000 0.000 NA   NA
 755515 755516 lpp2141 lpp2142 gspA   FALSE 0.069 182.000 0.000 NA N NA
 755516 755517 lpp2142 lpp2143     TRUE 0.997 4.000 0.185 1.000 Y NA
 755518 755519 lpp2144 lpp2145     FALSE 0.427 31.000 0.000 NA   NA
 755519 755520 lpp2145 lpp2146     FALSE 0.249 55.000 0.000 NA   NA
 755521 755522 lpp2147 lpp2148     FALSE 0.042 194.000 0.000 1.000   NA
 755523 755524 lpp2149 lpp2150     FALSE 0.022 217.000 0.000 NA   NA
 755524 755525 lpp2150 lpp2151     FALSE 0.084 133.000 0.000 NA   NA
 755525 755526 lpp2151 lpp2152     TRUE 0.937 34.000 0.279 NA   NA
 755526 755527 lpp2152 lpp2153     TRUE 0.627 -30.000 0.000 NA   NA
 755527 755528 lpp2153 lpp2154     FALSE 0.144 84.000 0.000 NA   NA
 755528 755529 lpp2154 lpp2155     TRUE 0.906 3.000 0.000 NA   NA
 755530 755531 lpp2156 lpp2157     FALSE 0.016 236.000 0.000 NA   NA
 755532 755533 lpp2158 lpp2159     FALSE 0.006 343.000 0.000 1.000   NA
 755535 755536 lpp2161 lpp2162     FALSE 0.080 136.000 0.000 NA   NA
 755537 755538 lpp2163 lpp2164     FALSE 0.009 277.000 0.000 NA   NA
 755539 755540 lpp2165 lpp2166     FALSE 0.154 80.000 0.000 NA   NA
 755540 755541 lpp2166 lpp2167     TRUE 0.607 21.000 0.000 NA   NA
 755544 755545 lpp2170 lpp2171     FALSE 0.063 161.000 0.000 NA   NA
 755546 755547 lpp2172 lpp2173     FALSE 0.076 143.000 0.000 NA   NA
 755547 755548 lpp2173 lpp2174     FALSE 0.005 378.000 0.000 1.000   NA
 755548 755549 lpp2174 lpp2175     FALSE 0.011 262.000 0.000 NA   NA
 755549 755550 lpp2175 lpp2176     FALSE 0.026 209.000 0.000 NA   NA
 755550 755551 lpp2176 lpp2177     TRUE 0.985 7.000 0.045 NA   NA
 755551 755552 lpp2177 lpp2178     TRUE 0.974 9.000 0.000 1.000 Y NA
 755552 755553 lpp2178 lpp2179     FALSE 0.026 222.000 0.000 1.000   NA
 755554 755555 lpp2180 lpp2181     TRUE 0.997 12.000 0.250 0.026 Y NA
 755555 755556 lpp2181 lpp2182     TRUE 0.998 5.000 0.250 0.026 Y NA
 755556 755557 lpp2182 lpp2183     TRUE 0.974 -10.000 0.018 1.000   NA
 755557 755558 lpp2183 lpp2184     TRUE 0.989 -3.000 0.018 1.000   NA
 755558 755559 lpp2184 lpp2185     TRUE 0.998 -3.000 0.250 1.000 Y NA
 755560 755561 lpp2186 lpp2187     TRUE 0.988 10.000 0.111 1.000   NA
 755562 755563 lpp2188 lpp2189     FALSE 0.069 153.000 0.000 NA   NA
 755564 755565 lpp2190 lpp2191     FALSE 0.061 162.000 0.000 NA   NA
 755566 755567 lpp2192 lpp2193     FALSE 0.016 236.000 0.000 NA   NA
 755567 755568 lpp2193 lpp2194     FALSE 0.173 87.000 0.000 1.000   NA
 755568 755569 lpp2194 lpp2195     TRUE 0.920 -49.000 0.035 NA   NA
 755569 755570 lpp2195 lpp2196   upp TRUE 0.939 13.000 0.004 NA   NA
 755570 755571 lpp2196 lpp2197 upp   FALSE 0.041 181.000 0.000 NA   NA
 755571 755572 lpp2197 lpp2198     TRUE 0.889 -6.000 0.000 NA   NA
 755573 755574 lpp2199 lpp2200     FALSE 0.006 321.000 0.000 NA   NA
 755576 755577 lpp2202 lpp2203     FALSE 0.128 91.000 0.000 NA   NA
 755577 755578 lpp2203 lpp2204     TRUE 0.651 130.000 0.127 1.000 N NA
 755578 755579 lpp2204 lpp2205     TRUE 0.912 130.000 0.706 0.029 Y NA
 755579 755580 lpp2205 lpp2206     TRUE 0.929 38.000 0.190 1.000 N NA
 755580 755581 lpp2206 lpp2207     FALSE 0.267 52.000 0.000 NA   NA