MicrobesOnline Operon Predictions for Streptococcus pyogenes MGAS5005

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column	Description
Gene1	VIMSS id of 1st gene in pair
SysName1	Systematic name of 1st gene in pair
Name1	Ordinary name of 1st gene in pair
Gene2	VIMSS id of 2nd gene in pair
SysName2	Systematic name of 2nd gene in pair
Name2	Ordinary name of 2nd gene in pair
bOp	Whether the pair is predicted to lie in the same operon or not
pOp	Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep	Distance between the two genes, in base pairs
MOGScore	Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore	Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim	Whether the genes share a COG category or not
ExprSim	Correlation of expression patterns (not available for most genomes)

Gene1	Gene2	SysName1	SysName2	Name1	Name2	bOp	pOp	Sep	MOGScore	GOScore	COGSim	ExprSim
922226	922227	M5005_Spy_0001	M5005_Spy_0002	dnaA	dnaN	TRUE	0.746	155.000	0.328	1.000	Y	NA
922227	922228	M5005_Spy_0002	M5005_Spy_0003	dnaN		FALSE	0.385	75.000	0.009	NA		NA
922228	922229	M5005_Spy_0003	M5005_Spy_0004			FALSE	0.070	330.000	0.064	NA		NA
922229	922230	M5005_Spy_0004	M5005_Spy_0005		pth	TRUE	0.833	70.000	0.184	1.000	Y	NA
922230	922231	M5005_Spy_0005	M5005_Spy_0006	pth	trcF	TRUE	0.926	3.000	0.137	1.000	N	NA
922231	922232	M5005_Spy_0006	M5005_Spy_0007	trcF		FALSE	0.225	162.000	0.024	1.000	N	NA
922232	922233	M5005_Spy_0007	M5005_Spy_0008		divIC	TRUE	0.930	-13.000	0.053	1.000	N	NA
922233	922234	M5005_Spy_0008	M5005_Spy_0009	divIC		TRUE	0.906	-3.000	0.011	NA		NA
922234	922235	M5005_Spy_0009	M5005_Spy_0010			TRUE	0.904	13.000	0.132	NA		NA
922235	922236	M5005_Spy_0010	M5005_Spy_0011		tilS	TRUE	0.913	-3.000	0.014	1.000	N	NA
922236	922237	M5005_Spy_0011	M5005_Spy_0012	tilS		TRUE	0.971	5.000	0.067	0.065	N	NA
922237	922238	M5005_Spy_0012	M5005_Spy_0013		ftsH	TRUE	0.898	22.000	0.192	1.000	N	NA
922238	922239	M5005_Spy_0013	M5005_Spy_0014	ftsH		FALSE	0.050	325.000	0.009	1.000	N	NA
922241	922242	M5005_Spy_R0001	M5005_Spy_T0001			FALSE	0.317	50.000	0.000	NA		NA
922242	922243	M5005_Spy_T0001	M5005_Spy_R0002			FALSE	0.025	296.000	0.000	NA		NA
922243	922244	M5005_Spy_R0002	M5005_Spy_R0003			FALSE	0.177	85.000	0.000	NA		NA
922244	922245	M5005_Spy_R0003	M5005_Spy_T0002			TRUE	0.632	18.000	0.000	NA		NA
922245	922246	M5005_Spy_T0002	M5005_Spy_T0003			TRUE	0.632	18.000	0.000	NA		NA
922246	922247	M5005_Spy_T0003	M5005_Spy_T0004			TRUE	0.476	32.000	0.000	NA		NA
922247	922248	M5005_Spy_T0004	M5005_Spy_T0005			TRUE	0.705	6.000	0.000	NA		NA
922248	922249	M5005_Spy_T0005	M5005_Spy_T0006			TRUE	0.685	11.000	0.000	NA		NA
922249	922250	M5005_Spy_T0006	M5005_Spy_T0007			TRUE	0.679	13.000	0.000	NA		NA
922250	922251	M5005_Spy_T0007	M5005_Spy_T0008			TRUE	0.694	9.000	0.000	NA		NA
922251	922252	M5005_Spy_T0008	M5005_Spy_T0009			TRUE	0.641	17.000	0.000	NA		NA
922252	922253	M5005_Spy_T0009	M5005_Spy_T0010			TRUE	0.720	4.000	0.000	NA		NA
922253	922254	M5005_Spy_T0010	M5005_Spy_R0004			FALSE	0.129	127.000	0.000	NA		NA
922254	922255	M5005_Spy_R0004	M5005_Spy_T0011			FALSE	0.317	50.000	0.000	NA		NA
922255	922256	M5005_Spy_T0011	M5005_Spy_R0005			FALSE	0.025	296.000	0.000	NA		NA
922256	922257	M5005_Spy_R0005	M5005_Spy_R0006			FALSE	0.177	85.000	0.000	NA		NA
922257	922258	M5005_Spy_R0006	M5005_Spy_T0012			TRUE	0.632	18.000	0.000	NA		NA
922258	922259	M5005_Spy_T0012	M5005_Spy_T0013			TRUE	0.632	18.000	0.000	NA		NA
922259	922260	M5005_Spy_T0013	M5005_Spy_T0014			TRUE	0.476	32.000	0.000	NA		NA
922260	922261	M5005_Spy_T0014	M5005_Spy_T0015			TRUE	0.705	6.000	0.000	NA		NA
922261	922262	M5005_Spy_T0015	M5005_Spy_T0016			TRUE	0.685	11.000	0.000	NA		NA
922262	922263	M5005_Spy_T0016	M5005_Spy_T0017			TRUE	0.679	13.000	0.000	NA		NA
922263	922264	M5005_Spy_T0017	M5005_Spy_T0018			TRUE	0.694	9.000	0.000	NA		NA
922264	922265	M5005_Spy_T0018	M5005_Spy_T0019			TRUE	0.641	17.000	0.000	NA		NA
922265	922266	M5005_Spy_T0019	M5005_Spy_T0020			TRUE	0.720	4.000	0.000	NA		NA
922266	922267	M5005_Spy_T0020	M5005_Spy_T0021			TRUE	0.705	6.000	0.000	NA		NA
922267	922268	M5005_Spy_T0021	M5005_Spy_T0022			TRUE	0.600	21.000	0.000	NA		NA
922268	922269	M5005_Spy_T0022	M5005_Spy_T0023			TRUE	0.534	26.000	0.000	NA		NA
922269	922270	M5005_Spy_T0023	M5005_Spy_T0024			TRUE	0.669	14.000	0.000	NA		NA
922270	922271	M5005_Spy_T0024	M5005_Spy_T0025			TRUE	0.600	21.000	0.000	NA		NA
922271	922272	M5005_Spy_T0025	M5005_Spy_T0026			TRUE	0.679	13.000	0.000	NA		NA
922272	922273	M5005_Spy_T0026	M5005_Spy_T0027			FALSE	0.445	35.000	0.000	NA		NA
922273	922274	M5005_Spy_T0027	M5005_Spy_T0028			TRUE	0.687	10.000	0.000	NA		NA
922276	922277	M5005_Spy_0017	M5005_Spy_0018	sibA	prsA.2	FALSE	0.125	253.000	0.107	NA		NA
922277	922278	M5005_Spy_0018	M5005_Spy_0019	prsA.2	recO	FALSE	0.066	186.000	0.000	1.000	N	NA
922278	922279	M5005_Spy_0019	M5005_Spy_0020	recO	plsX	FALSE	0.317	103.000	0.011	1.000	N	NA
922279	922280	M5005_Spy_0020	M5005_Spy_0021	plsX	acpP.2	TRUE	0.995	-7.000	0.017	0.009	Y	NA
922280	922281	M5005_Spy_0021	M5005_Spy_0022	acpP.2		FALSE	0.305	121.000	0.017	1.000	N	NA
922281	922282	M5005_Spy_0022	M5005_Spy_0023			TRUE	0.731	76.000	0.043	1.000	Y	NA
922282	922283	M5005_Spy_0023	M5005_Spy_0024		purF	TRUE	0.504	161.000	0.024	1.000	Y	NA
922283	922284	M5005_Spy_0024	M5005_Spy_0025	purF	purM	TRUE	0.959	28.000	0.248	1.000	Y	NA
922284	922285	M5005_Spy_0025	M5005_Spy_0026	purM	purN	TRUE	0.915	168.000	0.238	0.003	Y	NA
922285	922286	M5005_Spy_0026	M5005_Spy_0027	purN		TRUE	0.599	184.000	0.225	1.000	Y	NA
922288	922289	M5005_Spy_0029	M5005_Spy_0030	purD	purE	TRUE	0.523	158.000	0.044	1.000	Y	NA
922289	922290	M5005_Spy_0030	M5005_Spy_0031	purE	purK	TRUE	0.995	-16.000	0.002	0.002	Y	NA
922290	922291	M5005_Spy_0031	M5005_Spy_0032	purK		TRUE	0.523	27.000	0.000	NA		NA
922291	922292	M5005_Spy_0032	M5005_Spy_0033		purB	TRUE	0.632	18.000	0.000	NA		NA
922292	922293	M5005_Spy_0033	M5005_Spy_0034	purB		FALSE	0.262	132.000	0.005	1.000		NA
922293	922294	M5005_Spy_0034	M5005_Spy_0035		ruvB	FALSE	0.094	226.000	0.002	1.000		NA
922294	922295	M5005_Spy_0035	M5005_Spy_0036	ruvB		FALSE	0.233	138.000	0.005	1.000	N	NA
922295	922296	M5005_Spy_0036	M5005_Spy_0037			TRUE	0.797	23.000	0.019	NA		NA
922296	922297	M5005_Spy_0037	M5005_Spy_0038			TRUE	0.977	-3.000	0.351	NA		NA
922297	922298	M5005_Spy_0038	M5005_Spy_0039		adh2	FALSE	0.023	309.000	0.000	1.000	N	NA
922298	922299	M5005_Spy_0039	M5005_Spy_0040	adh2	adhA	TRUE	0.482	252.000	0.012	0.002		NA
922299	922300	M5005_Spy_0040	M5005_Spy_0041	adhA		FALSE	0.019	388.000	0.000	1.000		NA
922300	922301	M5005_Spy_0041	M5005_Spy_0042			TRUE	0.976	5.000	0.000	0.002		NA
922301	922302	M5005_Spy_0042	M5005_Spy_0043		rpsJ	FALSE	0.068	201.000	0.000	1.000		NA
922302	922303	M5005_Spy_0043	M5005_Spy_0044	rpsJ	rplC	TRUE	0.856	216.000	0.467	0.043	Y	NA
922303	922304	M5005_Spy_0044	M5005_Spy_0045	rplC	rplD	TRUE	0.995	24.000	0.544	0.033	Y	NA
922304	922305	M5005_Spy_0045	M5005_Spy_0046	rplD	rplW	TRUE	0.997	0.000	0.307	0.033	Y	NA
922305	922306	M5005_Spy_0046	M5005_Spy_0047	rplW	rplB	TRUE	0.998	18.000	0.849	0.038	Y	NA
922306	922307	M5005_Spy_0047	M5005_Spy_0048	rplB	rpsS	TRUE	0.973	139.000	0.820	0.043	Y	NA
922307	922308	M5005_Spy_0048	M5005_Spy_0049	rpsS	rplV	TRUE	0.998	16.000	0.769	0.043	Y	NA
922308	922309	M5005_Spy_0049	M5005_Spy_0050	rplV	rpsC	TRUE	0.998	13.000	0.719	0.043	Y	NA
922309	922310	M5005_Spy_0050	M5005_Spy_0051	rpsC	rplP	TRUE	0.999	4.000	0.828	0.043	Y	NA
922310	922311	M5005_Spy_0051	M5005_Spy_0052	rplP	rpmC	TRUE	0.998	10.000	0.802	0.033	Y	NA
922311	922312	M5005_Spy_0052	M5005_Spy_0053	rpmC	rpsQ	TRUE	0.997	26.000	0.828	0.033	Y	NA
922312	922313	M5005_Spy_0053	M5005_Spy_0054	rpsQ	rplN	TRUE	0.997	25.000	0.791	0.043	Y	NA
922313	922314	M5005_Spy_0054	M5005_Spy_0055	rplN	rplX	TRUE	0.984	79.000	0.810	0.043	Y	NA
922314	922315	M5005_Spy_0055	M5005_Spy_0056	rplX	rplE	TRUE	0.997	24.000	0.758	0.033	Y	NA
922315	922316	M5005_Spy_0056	M5005_Spy_0057	rplE	rpsN	TRUE	0.996	16.000	0.496	0.033	Y	NA
922316	922317	M5005_Spy_0057	M5005_Spy_0058	rpsN	rpsH	TRUE	0.941	151.000	0.473	0.033	Y	NA
922317	922318	M5005_Spy_0058	M5005_Spy_0059	rpsH	rplF	TRUE	0.942	203.000	0.808	0.033	Y	NA
922318	922319	M5005_Spy_0059	M5005_Spy_0060	rplF	rplR	TRUE	0.981	105.000	0.815	0.033	Y	NA
922319	922320	M5005_Spy_0060	M5005_Spy_0061	rplR	rpsE	TRUE	0.998	19.000	0.814	0.043	Y	NA
922320	922321	M5005_Spy_0061	M5005_Spy_0062	rpsE	rpmD	TRUE	0.998	15.000	0.789	0.043	Y	NA
922321	922322	M5005_Spy_0062	M5005_Spy_0063	rpmD	rplO	TRUE	0.938	214.000	0.653	0.005	Y	NA
922322	922323	M5005_Spy_0063	M5005_Spy_0064	rplO	secY	TRUE	0.980	17.000	0.730	1.000	N	NA
922323	922324	M5005_Spy_0064	M5005_Spy_0065	secY	adk	TRUE	0.482	150.000	0.241	1.000	N	NA
922324	922325	M5005_Spy_0065	M5005_Spy_0066	adk	infA	FALSE	0.353	118.000	0.059	1.000	N	NA
922325	922326	M5005_Spy_0066	M5005_Spy_0067	infA	rpmJ	TRUE	0.931	26.000	0.067	1.000	Y	NA
922326	922327	M5005_Spy_0067	M5005_Spy_0068	rpmJ	rpsM	TRUE	0.988	18.000	0.086	0.033	Y	NA
922327	922328	M5005_Spy_0068	M5005_Spy_0069	rpsM	rpsK	TRUE	0.998	18.000	0.810	0.033	Y	NA
922328	922329	M5005_Spy_0069	M5005_Spy_0070	rpsK	rpoA	TRUE	0.845	46.000	0.308	1.000	N	NA
922329	922330	M5005_Spy_0070	M5005_Spy_0071	rpoA	rplQ	TRUE	0.986	15.000	0.873	1.000	N	NA
922332	922333	M5005_Spy_R0007	M5005_Spy_T0029			FALSE	0.317	50.000	0.000	NA		NA
922333	922334	M5005_Spy_T0029	M5005_Spy_R0008			FALSE	0.025	296.000	0.000	NA		NA
922334	922335	M5005_Spy_R0008	M5005_Spy_R0009			FALSE	0.177	85.000	0.000	NA		NA
922335	922336	M5005_Spy_R0009	M5005_Spy_T0030			TRUE	0.632	18.000	0.000	NA		NA
922336	922337	M5005_Spy_T0030	M5005_Spy_T0031			TRUE	0.705	6.000	0.000	NA		NA
922337	922338	M5005_Spy_T0031	M5005_Spy_T0032			FALSE	0.445	35.000	0.000	NA		NA
922338	922339	M5005_Spy_T0032	M5005_Spy_T0033			TRUE	0.577	23.000	0.000	NA		NA
922339	922340	M5005_Spy_T0033	M5005_Spy_T0034			TRUE	0.669	14.000	0.000	NA		NA
922340	922341	M5005_Spy_T0034	M5005_Spy_T0035			TRUE	0.669	14.000	0.000	NA		NA
922341	922342	M5005_Spy_T0035	M5005_Spy_T0036			TRUE	0.600	21.000	0.000	NA		NA
922342	922343	M5005_Spy_T0036	M5005_Spy_T0037			TRUE	0.611	20.000	0.000	NA		NA
922343	922344	M5005_Spy_T0037	M5005_Spy_T0038			TRUE	0.701	7.000	0.000	NA		NA
922344	922345	M5005_Spy_T0038	M5005_Spy_T0039			TRUE	0.683	12.000	0.000	NA		NA
922345	922346	M5005_Spy_T0039	M5005_Spy_T0040			TRUE	0.694	9.000	0.000	NA		NA
922346	922347	M5005_Spy_T0040	M5005_Spy_T0041			TRUE	0.611	20.000	0.000	NA		NA
922347	922348	M5005_Spy_T0041	M5005_Spy_0073			FALSE	0.032	260.000	0.000	NA		NA
922348	922349	M5005_Spy_0073	M5005_Spy_0074			FALSE	0.011	638.000	0.000	NA		NA
922349	922350	M5005_Spy_0074	M5005_Spy_0075			TRUE	0.982	11.000	0.009	0.002		NA
922350	922351	M5005_Spy_0075	M5005_Spy_0076			TRUE	0.817	106.000	0.009	0.002		NA
922351	922352	M5005_Spy_0076	M5005_Spy_0077		adcR	FALSE	0.317	110.000	0.008	1.000		NA
922352	922353	M5005_Spy_0077	M5005_Spy_0078	adcR	adcC	TRUE	0.941	4.000	0.192	1.000	N	NA
922353	922354	M5005_Spy_0078	M5005_Spy_0079	adcC	adcB	TRUE	0.996	-7.000	0.673	1.000	Y	NA
922355	922356	M5005_Spy_0080	M5005_Spy_0081		tyrS	TRUE	0.489	51.000	0.004	1.000	N	NA
922357	922358	M5005_Spy_0082	M5005_Spy_0083	pbp1b	rpoB	FALSE	0.032	264.000	0.000	1.000	N	NA
922358	922359	M5005_Spy_0083	M5005_Spy_0084	rpoB	rpoC	TRUE	0.991	91.000	0.851	0.002	Y	NA
922359	922360	M5005_Spy_0084	M5005_Spy_0085	rpoC		FALSE	0.208	152.000	0.007	NA		NA
922360	922361	M5005_Spy_0085	M5005_Spy_0086		comYA	FALSE	0.422	93.000	0.083	NA		NA
922361	922362	M5005_Spy_0086	M5005_Spy_0087	comYA	comYB	TRUE	0.995	-121.000	0.639	1.000	Y	NA
922362	922363	M5005_Spy_0087	M5005_Spy_0088	comYB	comYC	TRUE	0.999	2.000	0.861	0.002	Y	NA
922363	922364	M5005_Spy_0088	M5005_Spy_0089	comYC		TRUE	0.517	74.000	0.110	NA		NA
922364	922365	M5005_Spy_0089	M5005_Spy_0090			TRUE	0.991	-43.000	0.786	NA		NA
922365	922366	M5005_Spy_0090	M5005_Spy_0091		comYD	TRUE	0.970	-7.000	0.250	NA		NA
922366	922367	M5005_Spy_0091	M5005_Spy_0092	comYD		TRUE	0.966	-16.000	0.232	NA		NA
922367	922368	M5005_Spy_0092	M5005_Spy_0093			FALSE	0.416	98.000	0.087	NA		NA
922368	922369	M5005_Spy_0093	M5005_Spy_0094		ackA	TRUE	0.614	59.000	0.130	1.000	N	NA
922369	922370	M5005_Spy_0094	M5005_Spy_0095	ackA		FALSE	0.064	187.000	0.000	NA		NA
922371	922372	M5005_Spy_0096	M5005_Spy_0097	proC	pepA	TRUE	0.622	48.000	0.041	1.000	N	NA
922372	922373	M5005_Spy_0097	M5005_Spy_0098	pepA		FALSE	0.406	110.000	0.100	NA		NA
922374	922375	M5005_Spy_0099	M5005_Spy_0100			TRUE	0.947	-3.000	0.140	NA		NA
922375	922376	M5005_Spy_0100	M5005_Spy_0101			TRUE	0.935	18.000	0.239	1.000		NA
922376	922377	M5005_Spy_0101	M5005_Spy_0102			FALSE	0.283	152.000	0.034	1.000		NA
922378	922379	M5005_Spy_0103	M5005_Spy_0104			TRUE	0.779	20.000	0.005	1.000	N	NA
922379	922380	M5005_Spy_0104	M5005_Spy_0105			TRUE	0.926	-13.000	0.034	1.000	N	NA
922380	922381	M5005_Spy_0105	M5005_Spy_0106		rofA	FALSE	0.208	147.000	0.003	NA		NA
922382	922383	M5005_Spy_0107	M5005_Spy_0108			TRUE	0.933	-7.000	0.061	NA		NA
922383	922384	M5005_Spy_0108	M5005_Spy_0109			TRUE	0.748	33.000	0.061	NA		NA
922384	922385	M5005_Spy_0109	M5005_Spy_0110		eftLSL.B	TRUE	0.687	10.000	0.000	NA		NA
922385	922386	M5005_Spy_0110	M5005_Spy_0111	eftLSL.B		TRUE	0.972	22.000	0.667	NA		NA
922387	922388	M5005_Spy_0112	M5005_Spy_0113			FALSE	0.164	241.000	0.000	NA	Y	NA
922392	922393	M5005_Spy_0117	M5005_Spy_0118			FALSE	0.190	96.000	0.000	1.000		NA
922394	922395	M5005_Spy_0119	M5005_Spy_0120		atoD.2	TRUE	0.965	12.000	0.100	1.000	Y	NA
922395	922396	M5005_Spy_0120	M5005_Spy_0121	atoD.2		TRUE	0.993	3.000	0.200	0.054	Y	NA
922398	922399	M5005_Spy_0123	M5005_Spy_0124		sloR	TRUE	0.646	37.000	0.016	NA	N	NA
922399	922400	M5005_Spy_0124	M5005_Spy_0125	sloR		FALSE	0.013	455.000	0.000	NA		NA
922400	922401	M5005_Spy_0125	M5005_Spy_0126		ntpI	TRUE	0.802	-10.000	0.000	NA		NA
922401	922402	M5005_Spy_0126	M5005_Spy_0127	ntpI	ntpK	TRUE	0.998	2.000	0.848	0.004		NA
922402	922403	M5005_Spy_0127	M5005_Spy_0128	ntpK	ntpE	TRUE	0.876	68.000	0.045	0.006		NA
922403	922404	M5005_Spy_0128	M5005_Spy_0129	ntpE	ntpC	TRUE	0.981	16.000	0.097	0.006		NA
922404	922405	M5005_Spy_0129	M5005_Spy_0130	ntpC	ntpF	TRUE	0.999	-3.000	0.487	0.002	Y	NA
922405	922406	M5005_Spy_0130	M5005_Spy_0131	ntpF	ntpA	TRUE	0.919	201.000	0.462	0.004	Y	NA
922406	922407	M5005_Spy_0131	M5005_Spy_0132	ntpA	ntpB	TRUE	0.999	1.000	0.776	0.004	Y	NA
922407	922408	M5005_Spy_0132	M5005_Spy_0133	ntpB	ntpD	TRUE	0.985	45.000	0.238	0.004	Y	NA
922409	922410	M5005_Spy_0134	M5005_Spy_0135			TRUE	0.986	13.000	0.818	NA		NA
922411	922412	M5005_Spy_0136	M5005_Spy_0137	purA		FALSE	0.178	327.000	0.000	0.021		NA
922412	922413	M5005_Spy_0137	M5005_Spy_0138		nusG	FALSE	0.095	173.000	0.000	1.000		NA
922413	922414	M5005_Spy_0138	M5005_Spy_0139	nusG	nga	FALSE	0.022	362.000	0.000	1.000		NA
922414	922415	M5005_Spy_0139	M5005_Spy_0140	nga		TRUE	0.960	5.000	0.286	1.000		NA
922415	922416	M5005_Spy_0140	M5005_Spy_0141		slo	TRUE	0.862	24.000	0.125	1.000		NA
922416	922417	M5005_Spy_0141	M5005_Spy_0142	slo		FALSE	0.033	255.000	0.000	NA		NA
922418	922419	M5005_Spy_0143	M5005_Spy_0144			FALSE	0.015	410.000	0.000	NA		NA
922419	922420	M5005_Spy_0144	M5005_Spy_0145			FALSE	0.076	175.000	0.000	NA		NA
922421	922422	M5005_Spy_0146	M5005_Spy_0147	metB	leuS	FALSE	0.052	211.000	0.000	1.000	N	NA
922422	922423	M5005_Spy_0147	M5005_Spy_0148	leuS		FALSE	0.028	307.000	0.000	1.000		NA
922423	922424	M5005_Spy_0148	M5005_Spy_0149			TRUE	0.941	71.000	0.431	0.023		NA
922424	922425	M5005_Spy_0149	M5005_Spy_0150			TRUE	0.937	123.000	0.279	0.018	Y	NA
922425	922426	M5005_Spy_0150	M5005_Spy_0151			TRUE	0.844	91.000	0.328	1.000	Y	NA
922426	922427	M5005_Spy_0151	M5005_Spy_0152			TRUE	0.991	5.000	0.536	1.000	Y	NA
922427	922428	M5005_Spy_0152	M5005_Spy_0153		araD	TRUE	0.995	2.000	0.700	1.000	Y	NA
922428	922429	M5005_Spy_0153	M5005_Spy_0154	araD		FALSE	0.269	58.000	0.000	NA		NA
922429	922430	M5005_Spy_0154	M5005_Spy_0155			FALSE	0.134	121.000	0.000	NA		NA
922430	922431	M5005_Spy_0155	M5005_Spy_0156			FALSE	0.204	253.000	0.231	NA		NA
922431	922432	M5005_Spy_0156	M5005_Spy_0157		opuAA	FALSE	0.013	488.000	0.000	NA		NA
922432	922433	M5005_Spy_0157	M5005_Spy_0158	opuAA	opuABC	TRUE	0.989	16.000	0.177	0.088	Y	NA
922433	922434	M5005_Spy_0158	M5005_Spy_0159	opuABC	polA	FALSE	0.233	131.000	0.003	1.000	N	NA
922434	922435	M5005_Spy_0159	M5005_Spy_0160	polA		FALSE	0.128	187.000	0.005	NA		NA
922435	922436	M5005_Spy_0160	M5005_Spy_0161		perR	TRUE	0.513	52.000	0.010	NA		NA
922436	922437	M5005_Spy_0161	M5005_Spy_0162	perR	vlg	FALSE	0.094	157.000	0.000	NA		NA
922437	922438	M5005_Spy_0162	M5005_Spy_0163	vlg		FALSE	0.044	222.000	0.000	NA		NA
922438	922439	M5005_Spy_0163	M5005_Spy_0164			TRUE	0.835	-7.000	0.000	1.000		NA
922440	922441	M5005_Spy_0165	M5005_Spy_0166			FALSE	0.408	40.000	0.000	NA		NA
922441	922442	M5005_Spy_0166	M5005_Spy_0167			TRUE	0.892	40.000	0.000	0.010		NA
922442	922443	M5005_Spy_0167	M5005_Spy_0168			TRUE	0.853	33.000	0.000	0.079		NA
922443	922444	M5005_Spy_0168	M5005_Spy_0169			FALSE	0.095	156.000	0.000	NA		NA
922446	922447	M5005_Spy_0171	M5005_Spy_0172			TRUE	0.964	21.000	0.000	0.079	Y	NA
922447	922448	M5005_Spy_0172	M5005_Spy_0173			FALSE	0.174	86.000	0.000	NA		NA
922449	922450	M5005_Spy_0174	M5005_Spy_0175		tgt	TRUE	0.564	24.000	0.000	NA		NA
922450	922451	M5005_Spy_0175	M5005_Spy_0176	tgt		FALSE	0.108	217.000	0.004	1.000		NA
922451	922452	M5005_Spy_0176	M5005_Spy_0177			TRUE	0.889	4.000	0.039	NA		NA
922452	922453	M5005_Spy_0177	M5005_Spy_0178			FALSE	0.291	140.000	0.033	NA		NA
922453	922454	M5005_Spy_0178	M5005_Spy_0179			TRUE	0.982	0.000	0.013	0.021		NA
922456	922457	M5005_Spy_0181	M5005_Spy_0182		speG	FALSE	0.035	251.000	0.000	NA		NA
922457	922458	M5005_Spy_0182	M5005_Spy_0183	speG		FALSE	0.177	85.000	0.000	NA		NA
922458	922459	M5005_Spy_0183	M5005_Spy_0184			FALSE	0.433	36.000	0.000	NA		NA
922459	922460	M5005_Spy_0184	M5005_Spy_0185		pgi	FALSE	0.158	97.000	0.000	NA		NA
922462	922463	M5005_Spy_0187	M5005_Spy_0188			TRUE	0.974	-97.000	0.000	0.016		NA
922463	922464	M5005_Spy_0188	M5005_Spy_0189			TRUE	0.796	-16.000	0.000	NA		NA
922464	922465	M5005_Spy_0189	M5005_Spy_0190			FALSE	0.187	81.000	0.000	NA		NA
922465	922466	M5005_Spy_0190	M5005_Spy_0191			TRUE	0.514	28.000	0.000	NA		NA
922467	922468	M5005_Spy_0192	M5005_Spy_0193	hasC.2		TRUE	0.697	33.000	0.007	1.000		NA
922468	922469	M5005_Spy_0193	M5005_Spy_0194		gpsA	TRUE	0.979	18.000	0.007	0.001		NA
922470	922471	M5005_Spy_0195	M5005_Spy_0196			TRUE	0.939	-7.000	0.080	1.000	N	NA
922471	922472	M5005_Spy_0196	M5005_Spy_0197			TRUE	0.999	3.000	0.720	0.008	Y	NA
922472	922473	M5005_Spy_0197	M5005_Spy_0198			FALSE	0.283	118.000	0.010	NA		NA
922473	922474	M5005_Spy_0198	M5005_Spy_0199			FALSE	0.269	110.000	0.005	NA		NA
922474	922475	M5005_Spy_0199	M5005_Spy_0200		radA	FALSE	0.412	81.000	0.028	1.000	N	NA
922475	922476	M5005_Spy_0200	M5005_Spy_0201	radA		FALSE	0.141	189.000	0.009	1.000	N	NA
922476	922477	M5005_Spy_0201	M5005_Spy_0202			TRUE	0.550	131.000	0.278	NA		NA
922477	922478	M5005_Spy_0202	M5005_Spy_0203		gltX	FALSE	0.149	182.000	0.008	NA		NA
922478	922479	M5005_Spy_0203	M5005_Spy_0204	gltX	fasB	FALSE	0.016	395.000	0.000	1.000	N	NA
922479	922480	M5005_Spy_0204	M5005_Spy_0205	fasB	fasC	TRUE	0.996	-3.000	0.750	NA	Y	NA
922480	922481	M5005_Spy_0205	M5005_Spy_0206	fasC	fasA	TRUE	0.992	4.000	0.571	NA	Y	NA
922481	922482	M5005_Spy_0206	M5005_Spy_0207	fasA	fasX	FALSE	0.012	540.000	0.000	1.000	N	NA
922482	922483	M5005_Spy_0207	M5005_Spy_0208	fasX		TRUE	0.929	-16.000	0.052	1.000	N	NA
922483	922484	M5005_Spy_0208	M5005_Spy_0209			TRUE	0.907	12.000	0.106	1.000		NA
922484	922485	M5005_Spy_0209	M5005_Spy_0210			FALSE	0.177	85.000	0.000	NA		NA
922485	922486	M5005_Spy_0210	M5005_Spy_0211		rpmH	FALSE	0.148	108.000	0.000	NA		NA
922486	922487	M5005_Spy_0211	M5005_Spy_0212	rpmH		FALSE	0.036	274.000	0.000	1.000		NA
922487	922488	M5005_Spy_0212	M5005_Spy_0213			TRUE	0.955	49.000	0.500	1.000	Y	NA
922488	922489	M5005_Spy_0213	M5005_Spy_0214			TRUE	0.894	103.000	0.133	0.042	Y	NA
922489	922490	M5005_Spy_0214	M5005_Spy_0215			TRUE	0.999	13.000	1.000	0.042	Y	NA
922490	922491	M5005_Spy_0215	M5005_Spy_0216			FALSE	0.094	157.000	0.000	NA		NA
922491	922492	M5005_Spy_0216	M5005_Spy_0217		nanH	TRUE	0.972	12.000	0.500	NA		NA
922492	922493	M5005_Spy_0217	M5005_Spy_0218	nanH		TRUE	0.856	22.000	0.108	1.000	N	NA
922495	922496	M5005_Spy_0220	M5005_Spy_0221	tatD		TRUE	0.974	-28.000	0.058	NA	Y	NA
922496	922497	M5005_Spy_0221	M5005_Spy_0222		ksgA	FALSE	0.397	114.000	0.093	1.000	N	NA
922497	922498	M5005_Spy_0222	M5005_Spy_0223	ksgA		FALSE	0.032	424.000	0.003	1.000		NA
922498	922499	M5005_Spy_0223	M5005_Spy_0224		rpe	TRUE	0.943	10.000	0.213	1.000		NA
922499	922500	M5005_Spy_0224	M5005_Spy_0225	rpe		TRUE	0.957	-7.000	0.166	1.000	N	NA
922500	922501	M5005_Spy_0225	M5005_Spy_0226			TRUE	0.896	2.000	0.030	NA		NA
922501	922502	M5005_Spy_0226	M5005_Spy_0227		cbf	TRUE	0.924	-10.000	0.030	NA		NA
922502	922503	M5005_Spy_0227	M5005_Spy_0228	cbf	purR	FALSE	0.102	267.000	0.052	1.000		NA
922503	922504	M5005_Spy_0228	M5005_Spy_0229	purR	prgA	TRUE	0.920	-9.000	0.017	NA		NA
922504	922505	M5005_Spy_0229	M5005_Spy_0230	prgA	rpsL	FALSE	0.124	208.000	0.012	NA		NA
922505	922506	M5005_Spy_0230	M5005_Spy_0231	rpsL	rpsG	TRUE	0.994	21.000	0.224	0.006	Y	NA
922506	922507	M5005_Spy_0231	M5005_Spy_0232	rpsG	fus	TRUE	0.482	367.000	0.579	1.000	Y	NA
922507	922508	M5005_Spy_0232	M5005_Spy_0233	fus	plr	FALSE	0.020	348.000	0.000	1.000	N	NA
922509	922510	M5005_Spy_0234	M5005_Spy_0235			FALSE	0.286	142.000	0.032	NA		NA
922510	922511	M5005_Spy_0235	M5005_Spy_0236			TRUE	0.997	-7.000	0.758	1.000	Y	NA
922512	922513	M5005_Spy_0237	M5005_Spy_0238		bacA	TRUE	0.561	66.000	0.118	NA		NA
922513	922514	M5005_Spy_0238	M5005_Spy_0239	bacA	mecA	FALSE	0.339	146.000	0.132	NA	N	NA
922514	922515	M5005_Spy_0239	M5005_Spy_0240	mecA		TRUE	0.470	151.000	0.267	NA	N	NA
922515	922516	M5005_Spy_0240	M5005_Spy_0241		rgpG	TRUE	0.785	-30.000	0.000	NA		NA
922516	922517	M5005_Spy_0241	M5005_Spy_0242	rgpG		TRUE	0.523	27.000	0.000	NA		NA
922517	922518	M5005_Spy_0242	M5005_Spy_0243			TRUE	0.731	95.000	0.139	1.000	Y	NA
922518	922519	M5005_Spy_0243	M5005_Spy_0244		nifS3	TRUE	0.953	31.000	0.606	1.000	N	NA
922519	922520	M5005_Spy_0244	M5005_Spy_0245	nifS3	nifU	TRUE	0.973	-13.000	0.292	1.000	N	NA
922520	922521	M5005_Spy_0245	M5005_Spy_0246	nifU		TRUE	0.994	-7.000	0.152	0.002	N	NA
922522	922523	M5005_Spy_0247	M5005_Spy_0248		dacA2	TRUE	0.908	168.000	0.231	0.005	Y	NA
922524	922525	M5005_Spy_0249	M5005_Spy_0250	oppA	oppB	TRUE	0.970	53.000	0.273	0.042	Y	NA
922525	922526	M5005_Spy_0250	M5005_Spy_0251	oppB	oppC	TRUE	0.998	0.000	0.556	0.042	Y	NA
922526	922527	M5005_Spy_0251	M5005_Spy_0252	oppC	oppD	TRUE	0.992	9.000	0.650	1.000	Y	NA
922527	922528	M5005_Spy_0252	M5005_Spy_0253	oppD	oppF	TRUE	0.997	-7.000	0.095	0.001	Y	NA
922529	922530	M5005_Spy_0254	M5005_Spy_0255			FALSE	0.016	375.000	0.000	NA		NA
922531	922532	M5005_Spy_R0010	M5005_Spy_T0042			FALSE	0.317	50.000	0.000	NA		NA
922532	922533	M5005_Spy_T0042	M5005_Spy_R0011			FALSE	0.025	296.000	0.000	NA		NA
922533	922534	M5005_Spy_R0011	M5005_Spy_R0012			FALSE	0.177	85.000	0.000	NA		NA
922534	922535	M5005_Spy_R0012	M5005_Spy_T0043			TRUE	0.705	6.000	0.000	NA		NA
922535	922536	M5005_Spy_T0043	M5005_Spy_T0044			FALSE	0.193	80.000	0.000	NA		NA
922536	922537	M5005_Spy_T0044	M5005_Spy_0256		comX1.1	TRUE	0.534	26.000	0.000	NA		NA
922537	922538	M5005_Spy_0256	M5005_Spy_0257	comX1.1		FALSE	0.014	611.000	0.000	1.000		NA
922538	922539	M5005_Spy_0257	M5005_Spy_0258			TRUE	0.974	-97.000	0.000	0.016		NA
922539	922540	M5005_Spy_0258	M5005_Spy_0259			TRUE	0.796	-16.000	0.000	NA		NA
922540	922541	M5005_Spy_0259	M5005_Spy_0260			TRUE	0.632	18.000	0.000	NA		NA
922541	922542	M5005_Spy_0260	M5005_Spy_0261			TRUE	0.985	0.000	0.555	1.000		NA
922542	922543	M5005_Spy_0261	M5005_Spy_0262			TRUE	0.813	25.000	0.068	NA		NA
922543	922544	M5005_Spy_0262	M5005_Spy_0263		nadD	TRUE	0.563	69.000	0.150	NA	N	NA
922544	922545	M5005_Spy_0263	M5005_Spy_0264	nadD		TRUE	0.986	-3.000	0.199	1.000	Y	NA
922545	922546	M5005_Spy_0264	M5005_Spy_0265			TRUE	0.941	0.000	0.149	NA		NA
922546	922547	M5005_Spy_0265	M5005_Spy_0266			TRUE	0.714	42.000	0.085	NA		NA
922547	922548	M5005_Spy_0266	M5005_Spy_0267			FALSE	0.120	254.000	0.094	NA		NA
922548	922549	M5005_Spy_0267	M5005_Spy_0268			FALSE	0.020	337.000	0.000	NA		NA
922549	922550	M5005_Spy_0268	M5005_Spy_0269			TRUE	0.802	-10.000	0.000	NA		NA
922550	922551	M5005_Spy_0269	M5005_Spy_0270			FALSE	0.054	203.000	0.000	NA		NA
922551	922552	M5005_Spy_0270	M5005_Spy_0271			FALSE	0.017	329.000	0.000	NA	N	NA
922552	922553	M5005_Spy_0271	M5005_Spy_0272			FALSE	0.152	250.000	0.000	NA	Y	NA
922553	922554	M5005_Spy_0272	M5005_Spy_0273			TRUE	0.997	1.000	0.938	1.000	Y	NA
922557	922558	M5005_Spy_0276	M5005_Spy_0277			TRUE	0.998	10.000	0.490	0.004	Y	NA
922558	922559	M5005_Spy_0277	M5005_Spy_0278		gidB	FALSE	0.393	70.000	0.006	1.000	N	NA
922560	922561	M5005_Spy_0279	M5005_Spy_0280	lemA		TRUE	0.789	47.000	0.222	NA		NA
922561	922562	M5005_Spy_0280	M5005_Spy_0281			FALSE	0.079	234.000	0.002	NA		NA
922562	922563	M5005_Spy_0281	M5005_Spy_0282		covR	FALSE	0.076	267.000	0.014	NA		NA
922563	922564	M5005_Spy_0282	M5005_Spy_0283	covR	covS	TRUE	0.929	143.000	0.438	0.085	Y	NA
922564	922565	M5005_Spy_0283	M5005_Spy_0284	covS		FALSE	0.093	215.000	0.007	NA	N	NA
922565	922566	M5005_Spy_0284	M5005_Spy_0285		dnaB	TRUE	0.936	-16.000	0.109	NA	N	NA
922566	922567	M5005_Spy_0285	M5005_Spy_0286	dnaB	dnaI	TRUE	0.996	1.000	0.817	NA	Y	NA
922567	922568	M5005_Spy_0286	M5005_Spy_0287	dnaI	pgdA	TRUE	0.475	63.000	0.008	1.000		NA
922568	922569	M5005_Spy_0287	M5005_Spy_0288	pgdA	snf	FALSE	0.120	207.000	0.004	1.000		NA
922569	922570	M5005_Spy_0288	M5005_Spy_0289	snf		FALSE	0.164	243.000	0.151	NA		NA
922570	922571	M5005_Spy_0289	M5005_Spy_0290		murC	TRUE	0.644	40.000	0.013	NA		NA
922571	922572	M5005_Spy_0290	M5005_Spy_0291	murC		TRUE	0.634	46.000	0.014	1.000		NA
922572	922573	M5005_Spy_0291	M5005_Spy_0292			FALSE	0.404	118.000	0.120	NA		NA
922573	922574	M5005_Spy_0292	M5005_Spy_0293		greA	TRUE	0.818	25.000	0.079	NA		NA
922575	922576	M5005_Spy_0294	M5005_Spy_0295			FALSE	0.030	265.000	0.000	NA		NA
922576	922577	M5005_Spy_0295	M5005_Spy_0296			TRUE	0.537	82.000	0.154	1.000	N	NA
922577	922578	M5005_Spy_0296	M5005_Spy_0297			FALSE	0.118	155.000	0.000	1.000		NA
922578	922579	M5005_Spy_0297	M5005_Spy_0298			TRUE	0.974	-97.000	0.000	0.016		NA
922580	922581	M5005_Spy_0299	M5005_Spy_0300			TRUE	0.717	39.000	0.043	1.000		NA
922581	922582	M5005_Spy_0300	M5005_Spy_0301			TRUE	0.893	15.000	0.123	NA		NA
922582	922583	M5005_Spy_0301	M5005_Spy_0302			FALSE	0.072	178.000	0.000	NA		NA
922583	922584	M5005_Spy_0302	M5005_Spy_0303		glr	FALSE	0.173	178.000	0.014	NA		NA
922584	922585	M5005_Spy_0303	M5005_Spy_0304	glr		TRUE	0.923	-3.000	0.034	1.000	N	NA
922585	922586	M5005_Spy_0304	M5005_Spy_0305			TRUE	0.942	-21.000	0.085	1.000		NA
922586	922587	M5005_Spy_0305	M5005_Spy_0306			TRUE	0.939	-3.000	0.065	1.000		NA
922587	922588	M5005_Spy_0306	M5005_Spy_0307			TRUE	0.947	-3.000	0.111	1.000		NA
922588	922589	M5005_Spy_0307	M5005_Spy_0308			TRUE	0.902	0.000	0.017	NA		NA
922589	922590	M5005_Spy_0308	M5005_Spy_0309			TRUE	0.987	-3.000	0.570	NA		NA
922590	922591	M5005_Spy_0309	M5005_Spy_0310			TRUE	0.547	99.000	0.224	NA	N	NA
922591	922592	M5005_Spy_0310	M5005_Spy_0311			TRUE	0.912	-3.000	0.014	NA		NA
922592	922593	M5005_Spy_0311	M5005_Spy_0312			FALSE	0.135	178.000	0.002	NA		NA
922593	922594	M5005_Spy_0312	M5005_Spy_0313			FALSE	0.022	311.000	0.000	NA		NA
922594	922595	M5005_Spy_0313	M5005_Spy_0314			TRUE	0.983	2.000	0.600	NA		NA
922595	922596	M5005_Spy_0314	M5005_Spy_0315			FALSE	0.088	293.000	0.050	1.000		NA
922596	922597	M5005_Spy_0315	M5005_Spy_0316			TRUE	0.899	39.000	0.408	NA		NA
922597	922598	M5005_Spy_0316	M5005_Spy_0317		hlyX	FALSE	0.293	133.000	0.023	NA		NA
922598	922599	M5005_Spy_0317	M5005_Spy_0318	hlyX	pflC	TRUE	0.877	6.000	0.028	NA		NA
922599	922600	M5005_Spy_0318	M5005_Spy_0319	pflC	ppaC	FALSE	0.300	131.000	0.023	1.000	N	NA
922600	922601	M5005_Spy_0319	M5005_Spy_0320	ppaC		FALSE	0.410	76.000	0.015	NA		NA
922602	922603	M5005_Spy_0321	M5005_Spy_0322	fhuG	fhuB	TRUE	0.988	72.000	0.857	0.041	Y	NA
922603	922604	M5005_Spy_0322	M5005_Spy_0323	fhuB	fhuD	TRUE	0.986	-10.000	0.179	1.000	Y	NA
922604	922605	M5005_Spy_0323	M5005_Spy_0324	fhuD	fhuA	TRUE	0.991	26.000	0.889	1.000	Y	NA
922605	922606	M5005_Spy_0324	M5005_Spy_0325	fhuA	murE	FALSE	0.118	246.000	0.062	1.000	N	NA
922607	922608	M5005_Spy_0326	M5005_Spy_0327		upp	FALSE	0.177	168.000	0.002	1.000		NA
922608	922609	M5005_Spy_0327	M5005_Spy_0328	upp	clpP	FALSE	0.103	224.000	0.010	1.000	N	NA
922609	922610	M5005_Spy_0328	M5005_Spy_0329	clpP		FALSE	0.043	492.000	0.065	NA		NA
922610	922611	M5005_Spy_0329	M5005_Spy_0330		tmk	FALSE	0.036	249.000	0.000	NA		NA
922611	922612	M5005_Spy_0330	M5005_Spy_0331	tmk	dnaX	TRUE	0.933	18.000	0.254	1.000	N	NA
922612	922613	M5005_Spy_0331	M5005_Spy_0332	dnaX		TRUE	0.949	19.000	0.372	NA		NA
922613	922614	M5005_Spy_0332	M5005_Spy_0333			FALSE	0.169	89.000	0.000	NA		NA
922614	922615	M5005_Spy_0333	M5005_Spy_0334			FALSE	0.097	155.000	0.000	NA		NA
922615	922616	M5005_Spy_0334	M5005_Spy_0335			TRUE	0.886	5.000	0.043	NA		NA
922616	922617	M5005_Spy_0335	M5005_Spy_0336			TRUE	0.706	27.000	0.005	NA		NA
922621	922622	M5005_Spy_0340	M5005_Spy_0341	lctO		FALSE	0.038	263.000	0.000	1.000		NA
922622	922623	M5005_Spy_0341	M5005_Spy_0343			FALSE	0.013	489.000	0.000	NA		NA
922623	922624	M5005_Spy_0343	M5005_Spy_0344			FALSE	0.153	103.000	0.000	NA		NA
922624	922625	M5005_Spy_0344	M5005_Spy_0345		metS	FALSE	0.038	243.000	0.000	NA		NA
922625	922626	M5005_Spy_0345	M5005_Spy_0346	metS		FALSE	0.021	331.000	0.000	NA		NA
922626	922627	M5005_Spy_0346	M5005_Spy_0347		nrdF.1	TRUE	0.794	-3.000	0.000	NA		NA
922627	922628	M5005_Spy_0347	M5005_Spy_0348	nrdF.1	nrdI	TRUE	0.993	4.000	0.643	NA	Y	NA
922628	922629	M5005_Spy_0348	M5005_Spy_0349	nrdI	nrdE.1	TRUE	0.997	-33.000	1.000	NA	Y	NA
922629	922630	M5005_Spy_0349	M5005_Spy_0350	nrdE.1		TRUE	0.791	-21.000	0.000	NA		NA
922632	922633	M5005_Spy_0352	M5005_Spy_0353			FALSE	0.116	142.000	0.000	NA		NA
922636	922637	M5005_Spy_0356	M5005_Spy_0357	speJ		FALSE	0.036	248.000	0.000	NA		NA
922638	922639	M5005_Spy_0358	M5005_Spy_0359			TRUE	0.990	-16.000	0.710	NA		NA
922639	922640	M5005_Spy_0359	M5005_Spy_0360			TRUE	0.694	46.000	0.067	1.000		NA
922640	922641	M5005_Spy_0360	M5005_Spy_0361			FALSE	0.025	333.000	0.000	1.000		NA
922641	922642	M5005_Spy_0361	M5005_Spy_0362		gcaD	FALSE	0.147	173.000	0.002	1.000	N	NA
922642	922643	M5005_Spy_0362	M5005_Spy_0363	gcaD		TRUE	0.723	31.000	0.015	1.000	N	NA
922643	922644	M5005_Spy_0363	M5005_Spy_0364			TRUE	0.907	0.000	0.025	NA		NA
922644	922645	M5005_Spy_0364	M5005_Spy_0365		pfs	TRUE	0.831	20.000	0.041	NA		NA
922645	922646	M5005_Spy_0365	M5005_Spy_0366	pfs		FALSE	0.105	151.000	0.000	NA		NA
922648	922649	M5005_Spy_0368	M5005_Spy_0369	mtsA	mtsB	TRUE	0.819	64.000	0.135	1.000	Y	NA
922649	922650	M5005_Spy_0369	M5005_Spy_0370	mtsB	mtsC	TRUE	0.977	1.000	0.130	1.000	Y	NA
922654	922655	M5005_Spy_0374	M5005_Spy_0375	rplK	rplA	TRUE	0.980	106.000	0.838	0.040	Y	NA
922655	922656	M5005_Spy_0375	M5005_Spy_0376	rplA		FALSE	0.019	351.000	0.000	1.000	N	NA
922656	922657	M5005_Spy_0376	M5005_Spy_0377			FALSE	0.105	165.000	0.000	1.000		NA
922657	922658	M5005_Spy_0377	M5005_Spy_0378		pyrH	TRUE	0.988	-25.000	0.008	0.003		NA
922658	922659	M5005_Spy_0378	M5005_Spy_0379	pyrH		TRUE	0.989	-12.000	0.008	0.003		NA
922659	922660	M5005_Spy_0379	M5005_Spy_0380		rrf	TRUE	0.960	29.000	0.626	1.000		NA
922660	922661	M5005_Spy_0380	M5005_Spy_0381	rrf		FALSE	0.334	109.000	0.012	1.000		NA
922661	922662	M5005_Spy_0381	M5005_Spy_0382		msrA.2	FALSE	0.454	73.000	0.016	1.000		NA
922662	922663	M5005_Spy_0382	M5005_Spy_0383	msrA.2		TRUE	0.942	-3.000	0.080	1.000		NA
922663	922664	M5005_Spy_0383	M5005_Spy_0384			FALSE	0.258	156.000	0.023	1.000		NA
922664	922665	M5005_Spy_0384	M5005_Spy_0385			FALSE	0.029	275.000	0.000	NA		NA
922665	922666	M5005_Spy_0385	M5005_Spy_0386		phoH	FALSE	0.175	159.000	0.004	NA		NA
922666	922667	M5005_Spy_0386	M5005_Spy_0387	phoH		TRUE	0.518	46.000	0.005	NA	N	NA
922667	922668	M5005_Spy_0387	M5005_Spy_0388			FALSE	0.265	108.000	0.003	NA		NA
922668	922669	M5005_Spy_0388	M5005_Spy_0389		dgk	TRUE	0.922	-19.000	0.035	NA		NA
922669	922670	M5005_Spy_0389	M5005_Spy_0390	dgk	era	FALSE	0.379	120.000	0.063	1.000		NA
922670	922671	M5005_Spy_0390	M5005_Spy_0391	era		TRUE	0.912	-16.000	0.007	1.000		NA
922673	922674	M5005_Spy_0393	M5005_Spy_0394			TRUE	0.969	15.000	0.500	NA		NA
922675	922676	M5005_Spy_0395	M5005_Spy_0396			TRUE	0.779	-61.000	0.000	NA		NA
922676	922677	M5005_Spy_0396	M5005_Spy_0397			TRUE	0.977	-3.000	0.000	0.015		NA
922678	922679	M5005_Spy_0398	M5005_Spy_0399			TRUE	0.761	65.000	0.333	NA		NA
922679	922680	M5005_Spy_0399	M5005_Spy_0400		silD	FALSE	0.025	294.000	0.000	NA		NA
922682	922683	M5005_Spy_0402	M5005_Spy_0403			FALSE	0.374	45.000	0.000	NA		NA
922687	922688	M5005_Spy_0407	M5005_Spy_0408	mutR	fpg	FALSE	0.175	172.000	0.004	1.000		NA
922688	922689	M5005_Spy_0408	M5005_Spy_0409	fpg		TRUE	0.927	-90.000	0.066	1.000	N	NA
922689	922690	M5005_Spy_0409	M5005_Spy_0410			FALSE	0.076	190.000	0.000	1.000		NA
922690	922691	M5005_Spy_0410	M5005_Spy_0411			FALSE	0.290	122.000	0.007	1.000		NA
922691	922692	M5005_Spy_0411	M5005_Spy_0412			TRUE	0.910	-3.000	0.012	1.000	N	NA
922692	922693	M5005_Spy_0412	M5005_Spy_0413		secG	TRUE	0.595	46.000	0.012	1.000	N	NA
922693	922694	M5005_Spy_0413	M5005_Spy_0414	secG		FALSE	0.400	97.000	0.064	1.000	N	NA
922694	922695	M5005_Spy_0414	M5005_Spy_0415			TRUE	0.982	3.000	0.143	0.035	N	NA
922695	922696	M5005_Spy_0415	M5005_Spy_0416			TRUE	0.913	15.000	0.000	1.000	Y	NA
922697	922698	M5005_Spy_0417	M5005_Spy_0418	pcp		TRUE	0.810	50.000	0.300	NA		NA
922698	922699	M5005_Spy_0418	M5005_Spy_0419			TRUE	0.993	0.000	0.939	NA		NA
922699	922700	M5005_Spy_0419	M5005_Spy_0420			FALSE	0.050	211.000	0.000	NA		NA
922700	922701	M5005_Spy_0420	M5005_Spy_0421		gloA	FALSE	0.229	145.000	0.012	NA	N	NA
922701	922702	M5005_Spy_0421	M5005_Spy_0422	gloA		TRUE	0.863	11.000	0.019	1.000	N	NA
922702	922703	M5005_Spy_0422	M5005_Spy_0423		pepQ	TRUE	0.622	49.000	0.053	1.000	N	NA
922704	922705	M5005_Spy_0424	M5005_Spy_0425	ccpA		FALSE	0.310	131.000	0.033	1.000	N	NA
922705	922706	M5005_Spy_0425	M5005_Spy_0426			TRUE	0.998	2.000	0.413	0.011	Y	NA
922706	922707	M5005_Spy_0426	M5005_Spy_0427		thrS	FALSE	0.015	422.000	0.000	1.000	N	NA
922707	922708	M5005_Spy_0427	M5005_Spy_0428	thrS	drrA	FALSE	0.281	141.000	0.012	1.000		NA
922708	922709	M5005_Spy_0428	M5005_Spy_0429	drrA		TRUE	0.741	2.000	0.000	NA		NA
922709	922710	M5005_Spy_0429	M5005_Spy_0430			TRUE	0.900	2.000	0.042	NA		NA
922710	922711	M5005_Spy_0430	M5005_Spy_0431			FALSE	0.056	201.000	0.000	NA		NA
922711	922712	M5005_Spy_0431	M5005_Spy_0432			FALSE	0.019	395.000	0.000	1.000		NA
922712	922713	M5005_Spy_0432	M5005_Spy_0433			TRUE	0.995	-43.000	0.576	1.000	Y	NA
922713	922714	M5005_Spy_0433	M5005_Spy_0434			TRUE	0.539	56.000	0.030	NA		NA
922714	922715	M5005_Spy_0434	M5005_Spy_0435		vicR	FALSE	0.204	162.000	0.013	NA		NA
922715	922716	M5005_Spy_0435	M5005_Spy_0436	vicR	vicK	TRUE	0.998	-7.000	0.597	0.056	Y	NA
922716	922717	M5005_Spy_0436	M5005_Spy_0437	vicK	vicX	TRUE	0.900	4.000	0.038	1.000		NA
922717	922718	M5005_Spy_0437	M5005_Spy_0438	vicX	acpA	FALSE	0.031	444.000	0.002	1.000		NA
922718	922719	M5005_Spy_0438	M5005_Spy_0439	acpA	smc	TRUE	0.929	1.000	0.120	1.000	N	NA
922721	922722	M5005_Spy_0441	M5005_Spy_0442	aroE.2		FALSE	0.129	99.000	0.000	NA	N	NA
922722	922723	M5005_Spy_0442	M5005_Spy_0443			TRUE	0.741	2.000	0.000	NA		NA
922723	922724	M5005_Spy_0443	M5005_Spy_0444			TRUE	0.803	-7.000	0.000	NA		NA
922724	922725	M5005_Spy_0444	M5005_Spy_0445		metK1	TRUE	0.687	10.000	0.000	NA		NA
922725	922726	M5005_Spy_0445	M5005_Spy_0446	metK1		TRUE	0.796	-16.000	0.000	NA		NA
922726	922727	M5005_Spy_0446	M5005_Spy_0447			FALSE	0.284	55.000	0.000	NA		NA
922727	922728	M5005_Spy_0447	M5005_Spy_0448			FALSE	0.012	526.000	0.000	NA		NA
922728	922729	M5005_Spy_0448	M5005_Spy_0449			TRUE	0.564	24.000	0.000	NA		NA
922729	922730	M5005_Spy_0449	M5005_Spy_0450		mefE	FALSE	0.211	85.000	0.000	1.000		NA
922731	922732	M5005_Spy_0451	M5005_Spy_0452			TRUE	0.980	-10.000	0.400	NA		NA
922732	922733	M5005_Spy_0452	M5005_Spy_0453			FALSE	0.177	85.000	0.000	NA		NA
922733	922734	M5005_Spy_0453	M5005_Spy_0454			TRUE	0.803	-9.000	0.000	NA		NA
922734	922735	M5005_Spy_0454	M5005_Spy_0455			TRUE	0.977	0.000	0.429	NA		NA
922736	922737	M5005_Spy_0456	M5005_Spy_0457			TRUE	0.965	0.000	0.273	NA		NA
922737	922738	M5005_Spy_0457	M5005_Spy_0458			TRUE	0.952	19.000	0.400	NA		NA
922738	922739	M5005_Spy_0458	M5005_Spy_0459			FALSE	0.152	105.000	0.000	NA		NA
922739	922740	M5005_Spy_0459	M5005_Spy_0460			FALSE	0.232	66.000	0.000	NA		NA
922740	922741	M5005_Spy_0460	M5005_Spy_0461			FALSE	0.014	417.000	0.000	NA		NA
922741	922742	M5005_Spy_0461	M5005_Spy_0462			TRUE	0.616	24.000	0.000	1.000		NA
922742	922743	M5005_Spy_0462	M5005_Spy_0463			TRUE	0.675	14.000	0.000	1.000	N	NA
922743	922744	M5005_Spy_0463	M5005_Spy_0464		mccF	FALSE	0.034	228.000	0.000	NA	N	NA
922744	922745	M5005_Spy_0464	M5005_Spy_0465	mccF		TRUE	0.679	13.000	0.000	NA		NA
922745	922746	M5005_Spy_0465	M5005_Spy_0466			FALSE	0.135	120.000	0.000	NA		NA
922747	922748	M5005_Spy_0467	M5005_Spy_0468			TRUE	0.976	48.000	0.333	0.073	Y	NA
922749	922750	M5005_Spy_0469	M5005_Spy_0470			FALSE	0.228	67.000	0.000	NA		NA
922750	922751	M5005_Spy_0470	M5005_Spy_0471			TRUE	0.993	4.000	0.375	0.019		NA
922751	922752	M5005_Spy_0471	M5005_Spy_0472		ftsY	TRUE	0.972	0.000	0.007	0.081		NA
922754	922755	M5005_Spy_0474	M5005_Spy_0475	licT		TRUE	0.458	164.000	0.259	1.000		NA
922755	922756	M5005_Spy_0475	M5005_Spy_0476		bglA	TRUE	0.978	19.000	0.318	1.000	Y	NA
922757	922758	M5005_Spy_0477	M5005_Spy_0478			TRUE	0.991	0.000	0.841	NA		NA
922761	922762	M5005_Spy_0480	M5005_Spy_0482			TRUE	0.960	-58.000	0.215	NA		NA
922762	922763	M5005_Spy_0482	M5005_Spy_0483			TRUE	0.512	64.000	0.051	NA		NA
922763	922764	M5005_Spy_0483	M5005_Spy_0484		ptsK	FALSE	0.176	305.000	0.017	NA	Y	NA
922764	922765	M5005_Spy_0484	M5005_Spy_0485	ptsK	lgt	TRUE	0.983	-3.000	0.494	1.000	N	NA
922765	922766	M5005_Spy_0485	M5005_Spy_0486	lgt		TRUE	0.842	22.000	0.079	NA		NA
922766	922767	M5005_Spy_0486	M5005_Spy_0487			TRUE	0.964	-7.000	0.206	NA		NA
922769	922770	M5005_Spy_0489	M5005_Spy_0490			TRUE	0.982	-28.000	0.000	0.003		NA
922770	922771	M5005_Spy_0490	M5005_Spy_0491			TRUE	0.881	91.000	0.156	0.003		NA
922774	922775	M5005_Spy_0494	M5005_Spy_0495		lysS	FALSE	0.122	136.000	0.000	NA		NA
922777	922778	M5005_Spy_0497	M5005_Spy_0498			FALSE	0.053	341.000	0.018	NA		NA
922778	922779	M5005_Spy_0498	M5005_Spy_0499			FALSE	0.330	91.000	0.010	NA		NA
922779	922780	M5005_Spy_0499	M5005_Spy_0500			FALSE	0.077	269.000	0.016	NA		NA
922781	922782	M5005_Spy_0501	M5005_Spy_0502			TRUE	0.978	-16.000	0.375	NA		NA
922783	922784	M5005_Spy_0503	M5005_Spy_0504		pepF	TRUE	0.933	-7.000	0.059	1.000	N	NA
922785	922786	M5005_Spy_0505	M5005_Spy_0506	ppc	ftsW	FALSE	0.211	170.000	0.028	1.000	N	NA
922788	922789	M5005_Spy_0508	M5005_Spy_0509		tpi	FALSE	0.078	241.000	0.003	1.000	N	NA
922790	922791	M5005_Spy_0510	M5005_Spy_0511		murM	TRUE	0.997	-13.000	0.200	0.011	Y	NA
922791	922792	M5005_Spy_0511	M5005_Spy_0512	murM		TRUE	0.983	0.000	0.500	1.000		NA
922792	922793	M5005_Spy_0512	M5005_Spy_0513			FALSE	0.105	151.000	0.000	NA		NA
922793	922794	M5005_Spy_0513	M5005_Spy_0514			FALSE	0.214	72.000	0.000	NA		NA
922795	922796	M5005_Spy_0515	M5005_Spy_0516		pacL	FALSE	0.042	231.000	0.000	NA		NA
922797	922798	M5005_Spy_0517	M5005_Spy_0518	regR		TRUE	0.858	64.000	0.562	NA		NA
922798	922799	M5005_Spy_0518	M5005_Spy_0519		agaD	TRUE	0.706	87.000	0.375	NA		NA
922799	922800	M5005_Spy_0519	M5005_Spy_0520	agaD		TRUE	0.999	-13.000	0.933	0.021	Y	NA
922800	922801	M5005_Spy_0520	M5005_Spy_0521		agaV	TRUE	0.998	19.000	0.933	0.021	Y	NA
922801	922802	M5005_Spy_0521	M5005_Spy_0522	agaV		TRUE	0.843	36.000	0.200	1.000		NA
922803	922804	M5005_Spy_0523	M5005_Spy_0524		idnO	FALSE	0.075	176.000	0.000	NA		NA
922804	922805	M5005_Spy_0524	M5005_Spy_0525	idnO		TRUE	0.884	25.000	0.197	1.000	N	NA
922805	922806	M5005_Spy_0525	M5005_Spy_0526			TRUE	0.928	29.000	0.094	1.000	Y	NA
922806	922807	M5005_Spy_0526	M5005_Spy_0527		kgdA	TRUE	0.976	5.000	0.167	1.000	Y	NA
922807	922808	M5005_Spy_0527	M5005_Spy_0528	kgdA		FALSE	0.156	296.000	0.000	0.049		NA
922808	922809	M5005_Spy_0528	M5005_Spy_0529			FALSE	0.013	641.000	0.000	1.000		NA
922809	922810	M5005_Spy_0529	M5005_Spy_0530		prfB	FALSE	0.201	154.000	0.006	1.000	N	NA
922810	922811	M5005_Spy_0530	M5005_Spy_0531	prfB	ftsE	TRUE	0.845	19.000	0.053	1.000	N	NA
922811	922812	M5005_Spy_0531	M5005_Spy_0532	ftsE	ftsX	TRUE	0.993	-7.000	0.431	1.000	Y	NA
922814	922815	M5005_Spy_0534	M5005_Spy_0535			TRUE	0.989	4.000	0.051	0.001		NA
922815	922816	M5005_Spy_0535	M5005_Spy_0536		dinG	FALSE	0.130	150.000	0.000	1.000		NA
922816	922817	M5005_Spy_0536	M5005_Spy_0537	dinG	aspC	FALSE	0.021	335.000	0.000	1.000	N	NA
922817	922818	M5005_Spy_0537	M5005_Spy_0538	aspC	asnS	TRUE	0.845	21.000	0.068	1.000	N	NA
922818	922819	M5005_Spy_0538	M5005_Spy_0539	asnS		FALSE	0.014	414.000	0.000	NA		NA
922819	922820	M5005_Spy_0539	M5005_Spy_0540			TRUE	0.963	-3.000	0.214	NA		NA
922820	922821	M5005_Spy_0540	M5005_Spy_0541			TRUE	0.982	-3.000	0.470	NA		NA
922821	922822	M5005_Spy_0541	M5005_Spy_0542		pepD	FALSE	0.280	133.000	0.015	NA		NA
922822	922823	M5005_Spy_0542	M5005_Spy_0543	pepD		TRUE	0.473	152.000	0.250	1.000	N	NA
922823	922824	M5005_Spy_0543	M5005_Spy_0544			FALSE	0.329	148.000	0.091	1.000	N	NA
922824	922825	M5005_Spy_0544	M5005_Spy_0545		agaS	TRUE	0.904	19.000	0.178	1.000	N	NA
922826	922827	M5005_Spy_0546	M5005_Spy_0547	rpmE		FALSE	0.349	115.000	0.020	1.000		NA
922828	922829	M5005_Spy_0548	M5005_Spy_0549			FALSE	0.307	176.000	0.167	1.000	N	NA
922829	922830	M5005_Spy_0549	M5005_Spy_0550			TRUE	0.942	-7.000	0.094	1.000	N	NA
922830	922831	M5005_Spy_0550	M5005_Spy_0551		rplS	FALSE	0.272	115.000	0.006	1.000	N	NA
922831	922832	M5005_Spy_0551	M5005_Spy_T0045	rplS		FALSE	0.036	247.000	0.000	NA		NA
922832	922833	M5005_Spy_T0045	M5005_Spy_0552			FALSE	0.010	685.000	0.000	NA		NA
922833	922834	M5005_Spy_0552	M5005_Spy_0553		gyrB	TRUE	0.901	1.000	0.013	1.000		NA
922834	922835	M5005_Spy_0553	M5005_Spy_0554	gyrB		FALSE	0.043	368.000	0.011	1.000	N	NA
922838	922839	M5005_Spy_0557	M5005_Spy_0558			FALSE	0.331	49.000	0.000	NA		NA
922839	922840	M5005_Spy_0558	M5005_Spy_0559			FALSE	0.018	362.000	0.000	NA		NA
922840	922841	M5005_Spy_0559	M5005_Spy_0560			TRUE	0.794	-3.000	0.000	NA		NA
922842	922843	M5005_Spy_0561	M5005_Spy_0562	epf	sagA	FALSE	0.010	865.000	0.000	NA		NA
922843	922844	M5005_Spy_0562	M5005_Spy_0563	sagA	sagB	FALSE	0.044	222.000	0.000	NA		NA
922844	922845	M5005_Spy_0563	M5005_Spy_0564	sagB	sagC	TRUE	0.961	-3.000	0.200	NA		NA
922845	922846	M5005_Spy_0564	M5005_Spy_0565	sagC	sagD	TRUE	0.938	20.000	0.318	NA		NA
922846	922847	M5005_Spy_0565	M5005_Spy_0566	sagD	sagE	TRUE	0.944	-25.000	0.136	NA		NA
922847	922848	M5005_Spy_0566	M5005_Spy_0567	sagE	sagF	TRUE	0.991	-3.000	0.750	NA		NA
922848	922849	M5005_Spy_0567	M5005_Spy_0568	sagF	sagG	TRUE	0.975	23.000	0.750	NA		NA
922849	922850	M5005_Spy_0568	M5005_Spy_0569	sagG	sagH	TRUE	0.974	9.000	0.500	1.000	N	NA
922850	922851	M5005_Spy_0569	M5005_Spy_0570	sagH	sagI	TRUE	0.997	-3.000	0.160	0.007	Y	NA
922851	922852	M5005_Spy_0570	M5005_Spy_0571	sagI		FALSE	0.014	571.000	0.000	1.000		NA
922852	922853	M5005_Spy_0571	M5005_Spy_0572			FALSE	0.028	278.000	0.000	NA		NA
922853	922854	M5005_Spy_0572	M5005_Spy_0573		lig	FALSE	0.135	194.000	0.010	NA		NA
922854	922855	M5005_Spy_0573	M5005_Spy_0574	lig		TRUE	0.844	14.000	0.013	1.000	N	NA
922855	922856	M5005_Spy_0574	M5005_Spy_0575		atpE	FALSE	0.019	393.000	0.000	1.000		NA
922856	922857	M5005_Spy_0575	M5005_Spy_0576	atpE	atpB	TRUE	0.967	35.000	0.189	0.009		NA
922857	922858	M5005_Spy_0576	M5005_Spy_0577	atpB	atpF	TRUE	0.989	18.000	0.032	0.009	Y	NA
922858	922859	M5005_Spy_0577	M5005_Spy_0578	atpF	atpH	TRUE	0.997	0.000	0.222	0.009	Y	NA
922859	922860	M5005_Spy_0578	M5005_Spy_0579	atpH	atpA	TRUE	0.999	16.000	0.864	0.009	Y	NA
922860	922861	M5005_Spy_0579	M5005_Spy_0580	atpA	atpG	TRUE	0.999	16.000	0.846	0.009	Y	NA
922861	922862	M5005_Spy_0580	M5005_Spy_0581	atpG	atpD	TRUE	0.968	162.000	0.724	0.009	Y	NA
922862	922863	M5005_Spy_0581	M5005_Spy_0582	atpD	atpC	TRUE	0.999	13.000	0.837	0.009	Y	NA
922863	922864	M5005_Spy_0582	M5005_Spy_0583	atpC		FALSE	0.088	266.000	0.039	NA		NA
922864	922865	M5005_Spy_0583	M5005_Spy_0584		murA	FALSE	0.275	227.000	0.279	NA		NA
922865	922866	M5005_Spy_0584	M5005_Spy_0585	murA	epuA	TRUE	0.914	4.000	0.110	NA		NA
922866	922867	M5005_Spy_0585	M5005_Spy_0586	epuA	endA	TRUE	0.850	36.000	0.237	NA		NA
922867	922868	M5005_Spy_0586	M5005_Spy_0587	endA	pheS	FALSE	0.034	283.000	0.000	1.000		NA
922868	922869	M5005_Spy_0587	M5005_Spy_0588	pheS	pheT	TRUE	0.955	195.000	0.574	0.001	Y	NA
922869	922870	M5005_Spy_0588	M5005_Spy_0589	pheT		FALSE	0.257	110.000	0.002	1.000	N	NA
922870	922871	M5005_Spy_0589	M5005_Spy_0590			TRUE	0.901	-7.000	0.006	NA		NA
922871	922872	M5005_Spy_0590	M5005_Spy_0591			TRUE	0.511	73.000	0.095	NA		NA
922872	922873	M5005_Spy_0591	M5005_Spy_0592			TRUE	0.971	10.000	0.444	1.000		NA
922875	922876	M5005_Spy_0594	M5005_Spy_0595	rexB	rexA	TRUE	0.992	-39.000	0.070	0.072	Y	NA
922876	922877	M5005_Spy_0595	M5005_Spy_0596	rexA		FALSE	0.122	140.000	0.000	1.000	N	NA
922877	922878	M5005_Spy_0596	M5005_Spy_0597		rpsU	FALSE	0.310	141.000	0.027	1.000		NA
922880	922881	M5005_Spy_0599	M5005_Spy_0600	dnaG	rpoD	TRUE	0.938	9.000	0.209	1.000	N	NA
922881	922882	M5005_Spy_0600	M5005_Spy_0601	rpoD		FALSE	0.117	236.000	0.044	NA		NA
922882	922883	M5005_Spy_0601	M5005_Spy_0602		rmlD	FALSE	0.406	138.000	0.152	NA		NA
922883	922884	M5005_Spy_0602	M5005_Spy_0603	rmlD	rgpAc	TRUE	0.754	119.000	0.212	1.000	Y	NA
922884	922885	M5005_Spy_0603	M5005_Spy_0604	rgpAc	rgpBc	TRUE	0.973	-10.000	0.289	NA		NA
922885	922886	M5005_Spy_0604	M5005_Spy_0605	rgpBc	rgpCc	TRUE	0.960	3.000	0.289	NA		NA
922886	922887	M5005_Spy_0605	M5005_Spy_0606	rgpCc	rgpDc	TRUE	0.773	0.000	0.000	1.000	N	NA
922887	922888	M5005_Spy_0606	M5005_Spy_0607	rgpDc	rgpEc	TRUE	0.547	25.000	0.000	NA		NA
922888	922889	M5005_Spy_0607	M5005_Spy_0608	rgpEc	rgpFc	TRUE	0.978	-3.000	0.385	NA		NA
922889	922890	M5005_Spy_0608	M5005_Spy_0609	rgpFc		TRUE	0.950	-3.000	0.000	NA	Y	NA
922890	922891	M5005_Spy_0609	M5005_Spy_0610			FALSE	0.270	179.000	0.000	NA	Y	NA
922891	922892	M5005_Spy_0610	M5005_Spy_0611			TRUE	0.982	2.000	0.568	NA		NA
922892	922893	M5005_Spy_0611	M5005_Spy_0612		amrA	TRUE	0.924	-7.000	0.027	NA		NA
922893	922894	M5005_Spy_0612	M5005_Spy_0613	amrA		TRUE	0.957	-19.000	0.182	NA		NA
922894	922895	M5005_Spy_0613	M5005_Spy_0614		pepT	FALSE	0.161	94.000	0.000	NA		NA
922895	922896	M5005_Spy_0614	M5005_Spy_0615	pepT	ebsA	TRUE	0.684	41.000	0.051	NA		NA
922898	922899	M5005_Spy_0617	M5005_Spy_0618		cmk	TRUE	0.849	15.000	0.012	1.000		NA
922899	922900	M5005_Spy_0618	M5005_Spy_0619	cmk	infC	FALSE	0.197	162.000	0.010	1.000	N	NA
922900	922901	M5005_Spy_0619	M5005_Spy_0620	infC	rpl36	TRUE	0.975	42.000	0.652	1.000	Y	NA
922901	922902	M5005_Spy_0620	M5005_Spy_0621	rpl36	rplT	TRUE	0.993	59.000	0.928	0.028	Y	NA
922904	922905	M5005_Spy_0623	M5005_Spy_0624		aroD	TRUE	0.949	-3.000	0.125	1.000		NA
922905	922906	M5005_Spy_0624	M5005_Spy_0625	aroD	aroF	TRUE	0.905	94.000	0.004	0.003	Y	NA
922906	922907	M5005_Spy_0625	M5005_Spy_0626	aroF		FALSE	0.426	61.000	0.005	NA		NA
922907	922908	M5005_Spy_0626	M5005_Spy_0627		gor	FALSE	0.104	221.000	0.010	NA		NA
922909	922910	M5005_Spy_0628	M5005_Spy_0629	folC.2		TRUE	0.902	30.000	0.308	NA		NA
922911	922912	M5005_Spy_0630	M5005_Spy_0631	nifS1	thiI	TRUE	0.959	12.000	0.349	1.000	N	NA
922912	922913	M5005_Spy_0631	M5005_Spy_0632	thiI	capA	TRUE	0.665	38.000	0.014	1.000	N	NA
922913	922914	M5005_Spy_0632	M5005_Spy_0633	capA	rplU	FALSE	0.051	214.000	0.000	1.000	N	NA
922914	922915	M5005_Spy_0633	M5005_Spy_0634	rplU		TRUE	0.974	12.000	0.208	NA	Y	NA
922915	922916	M5005_Spy_0634	M5005_Spy_0635		rpmA	TRUE	0.948	28.000	0.203	NA	Y	NA
922916	922917	M5005_Spy_0635	M5005_Spy_0636	rpmA		FALSE	0.020	348.000	0.000	1.000	N	NA
922917	922918	M5005_Spy_0636	M5005_Spy_0637		lsp	TRUE	0.943	-3.000	0.119	1.000	N	NA
922918	922919	M5005_Spy_0637	M5005_Spy_0638	lsp		TRUE	0.939	-10.000	0.082	1.000	N	NA
922919	922920	M5005_Spy_0638	M5005_Spy_0639		pyrR	FALSE	0.047	396.000	0.048	1.000	N	NA
922920	922921	M5005_Spy_0639	M5005_Spy_0640	pyrR	pyrP	TRUE	0.964	16.000	0.140	1.000	Y	NA
922921	922922	M5005_Spy_0640	M5005_Spy_0641	pyrP	pyrB	TRUE	0.801	61.000	0.064	1.000	Y	NA
922922	922923	M5005_Spy_0641	M5005_Spy_0642	pyrB	carA	TRUE	0.854	44.000	0.014	1.000	Y	NA
922923	922924	M5005_Spy_0642	M5005_Spy_0643	carA	carB	TRUE	0.811	226.000	0.117	0.001	Y	NA
922924	922925	M5005_Spy_0643	M5005_Spy_0644	carB		FALSE	0.064	300.000	0.017	1.000	N	NA
922925	922926	M5005_Spy_0644	M5005_Spy_0645			TRUE	0.993	0.000	0.923	1.000	N	NA
922926	922927	M5005_Spy_0645	M5005_Spy_0646			TRUE	0.996	12.000	0.923	1.000	Y	NA
922927	922928	M5005_Spy_0646	M5005_Spy_0647			FALSE	0.035	254.000	0.000	1.000	N	NA
922928	922929	M5005_Spy_0647	M5005_Spy_0648		rpsP	FALSE	0.237	127.000	0.003	1.000	N	NA
922929	922930	M5005_Spy_0648	M5005_Spy_0649	rpsP		TRUE	0.966	10.000	0.385	1.000		NA
922930	922931	M5005_Spy_0649	M5005_Spy_0650			TRUE	0.694	9.000	0.000	NA		NA
922931	922932	M5005_Spy_0650	M5005_Spy_0651			FALSE	0.010	795.000	0.000	NA		NA
922932	922933	M5005_Spy_0651	M5005_Spy_0652			TRUE	0.917	20.000	0.200	1.000		NA
922935	922936	M5005_Spy_0654	M5005_Spy_0655		rimM	FALSE	0.050	215.000	0.000	1.000	N	NA
922936	922937	M5005_Spy_0655	M5005_Spy_0656	rimM	trmD	TRUE	0.996	-10.000	0.672	1.000	Y	NA
922937	922938	M5005_Spy_0656	M5005_Spy_0657	trmD	trxB	TRUE	0.885	0.000	0.007	1.000	N	NA
922938	922939	M5005_Spy_0657	M5005_Spy_0658	trxB		FALSE	0.208	178.000	0.059	NA		NA
922939	922940	M5005_Spy_0658	M5005_Spy_0659		apbA	TRUE	0.956	13.000	0.333	NA		NA
922940	922941	M5005_Spy_0659	M5005_Spy_0660	apbA	fruR	FALSE	0.033	256.000	0.000	1.000	N	NA
922941	922942	M5005_Spy_0660	M5005_Spy_0661	fruR	fruB	TRUE	0.996	-3.000	0.721	1.000	Y	NA
922942	922943	M5005_Spy_0661	M5005_Spy_0662	fruB	fruA	TRUE	0.997	-3.000	0.816	1.000	Y	NA
922943	922944	M5005_Spy_0662	M5005_Spy_0663	fruA	mur1.1	FALSE	0.353	99.000	0.022	1.000	N	NA
922944	922945	M5005_Spy_0663	M5005_Spy_0664	mur1.1	mur1.2	TRUE	0.950	152.000	0.333	0.002	Y	NA
922946	922947	M5005_Spy_0665	M5005_Spy_0666			FALSE	0.054	203.000	0.000	NA		NA
922947	922948	M5005_Spy_0666	M5005_Spy_0667			TRUE	0.788	-25.000	0.000	NA		NA
922948	922949	M5005_Spy_0667	M5005_Spy_0668		mac	FALSE	0.076	175.000	0.000	NA		NA
922950	922951	M5005_Spy_0669	M5005_Spy_0670			FALSE	0.044	224.000	0.000	NA		NA
922951	922952	M5005_Spy_0670	M5005_Spy_0671			FALSE	0.052	228.000	0.000	1.000		NA
922952	922953	M5005_Spy_0671	M5005_Spy_0672			TRUE	0.938	0.000	0.139	NA		NA
922953	922954	M5005_Spy_0672	M5005_Spy_0673		papS	FALSE	0.264	125.000	0.009	NA		NA
922954	922955	M5005_Spy_0673	M5005_Spy_0674	papS		TRUE	0.935	-3.000	0.056	1.000		NA
922955	922956	M5005_Spy_0674	M5005_Spy_0675			FALSE	0.032	257.000	0.000	NA		NA
922956	922957	M5005_Spy_0675	M5005_Spy_0676			TRUE	0.694	9.000	0.000	NA		NA
922957	922958	M5005_Spy_0676	M5005_Spy_0677		fms	FALSE	0.032	256.000	0.000	NA		NA
922960	922961	M5005_Spy_0679	M5005_Spy_0680			TRUE	0.989	3.000	0.800	1.000		NA
922961	922962	M5005_Spy_0680	M5005_Spy_0681			TRUE	0.991	9.000	0.533	1.000	Y	NA
922962	922963	M5005_Spy_0681	M5005_Spy_0682		mvaK1	FALSE	0.029	279.000	0.000	1.000	N	NA
922963	922964	M5005_Spy_0682	M5005_Spy_0683	mvaK1	mvaD	TRUE	0.998	-18.000	0.281	0.003	Y	NA
922964	922965	M5005_Spy_0683	M5005_Spy_0684	mvaD	mvaK2	TRUE	0.998	-7.000	0.312	0.005	Y	NA
922965	922966	M5005_Spy_0684	M5005_Spy_0685	mvaK2		TRUE	0.943	-7.000	0.097	1.000	N	NA
922967	922968	M5005_Spy_0686	M5005_Spy_0687		mvaS.1	TRUE	0.986	-13.000	0.183	1.000	Y	NA
922969	922970	M5005_Spy_0688	M5005_Spy_0689	thyA	dyr	TRUE	0.686	80.000	0.295	1.000	N	NA
922970	922971	M5005_Spy_0689	M5005_Spy_0690	dyr		TRUE	0.825	20.000	0.030	NA		NA
922971	922972	M5005_Spy_0690	M5005_Spy_0691		clpX	FALSE	0.273	130.000	0.012	NA		NA
922972	922973	M5005_Spy_0691	M5005_Spy_0692	clpX		TRUE	0.887	10.000	0.043	1.000		NA
922973	922974	M5005_Spy_0692	M5005_Spy_0693			FALSE	0.207	148.000	0.004	NA		NA
922976	922977	M5005_Spy_0695	M5005_Spy_0696	rpiA	deoB	TRUE	0.714	77.000	0.018	1.000	Y	NA
922977	922978	M5005_Spy_0696	M5005_Spy_0697	deoB	arsC	TRUE	0.872	19.000	0.108	1.000	N	NA
922978	922979	M5005_Spy_0697	M5005_Spy_0698	arsC	punA	TRUE	0.942	-16.000	0.108	1.000	N	NA
922979	922980	M5005_Spy_0698	M5005_Spy_0699	punA	deoD2	TRUE	0.457	663.000	0.040	0.001	Y	NA
922980	922981	M5005_Spy_0699	M5005_Spy_0700	deoD2	cpsX	TRUE	0.943	-7.000	0.107	NA		NA
922983	922984	M5005_Spy_0702	M5005_Spy_0703		pyrF	FALSE	0.028	277.000	0.000	NA		NA
922984	922985	M5005_Spy_0703	M5005_Spy_0704	pyrF	pyrE	TRUE	0.837	58.000	0.133	1.000	Y	NA
922985	922986	M5005_Spy_0704	M5005_Spy_0705	pyrE	amiC	FALSE	0.059	197.000	0.000	1.000	N	NA
922986	922987	M5005_Spy_0705	M5005_Spy_0706	amiC		TRUE	0.483	118.000	0.182	1.000	N	NA
922987	922988	M5005_Spy_0706	M5005_Spy_0707			TRUE	0.980	29.000	0.125	0.038	Y	NA
922988	922989	M5005_Spy_0707	M5005_Spy_0708		ung	FALSE	0.298	133.000	0.025	1.000	N	NA
922989	922990	M5005_Spy_0708	M5005_Spy_0709	ung	pyrC	FALSE	0.262	132.000	0.009	1.000	N	NA
922992	922993	M5005_Spy_0711	M5005_Spy_0712	parE	parC	TRUE	0.980	91.000	0.552	0.003	Y	NA
922993	922994	M5005_Spy_0712	M5005_Spy_0713	parC	bcaT	FALSE	0.372	123.000	0.086	1.000	N	NA
922994	922995	M5005_Spy_0713	M5005_Spy_0714	bcaT		TRUE	0.559	64.000	0.095	NA		NA
922995	922996	M5005_Spy_0714	M5005_Spy_T0046			FALSE	0.257	61.000	0.000	NA		NA
922996	922997	M5005_Spy_T0046	M5005_Spy_T0047			FALSE	0.301	52.000	0.000	NA		NA
922997	922998	M5005_Spy_T0047	M5005_Spy_0715			FALSE	0.131	124.000	0.000	NA		NA
922998	922999	M5005_Spy_0715	M5005_Spy_T0048			FALSE	0.144	113.000	0.000	NA		NA
923001	923002	M5005_Spy_0717	M5005_Spy_0718			FALSE	0.218	71.000	0.000	NA		NA
923002	923003	M5005_Spy_0718	M5005_Spy_0719			FALSE	0.331	49.000	0.000	NA		NA
923003	923004	M5005_Spy_0719	M5005_Spy_0720			FALSE	0.122	237.000	0.056	1.000	N	NA
923006	923007	M5005_Spy_0722	M5005_Spy_0723	miaA	hflX	TRUE	0.471	73.000	0.027	1.000		NA
923007	923008	M5005_Spy_0723	M5005_Spy_0724	hflX		TRUE	0.926	-7.000	0.014	1.000		NA
923008	923009	M5005_Spy_0724	M5005_Spy_0725		elaC	TRUE	0.864	15.000	0.022	1.000		NA
923009	923010	M5005_Spy_0725	M5005_Spy_0726	elaC		TRUE	0.932	0.000	0.074	1.000		NA
923010	923011	M5005_Spy_0726	M5005_Spy_0727		recJ	TRUE	0.924	-3.000	0.016	1.000		NA
923011	923012	M5005_Spy_0727	M5005_Spy_0728	recJ	apt	FALSE	0.342	151.000	0.128	1.000	N	NA
923012	923013	M5005_Spy_0728	M5005_Spy_0729	apt	dnaD	FALSE	0.304	81.000	0.005	NA	N	NA
923013	923014	M5005_Spy_0729	M5005_Spy_0730	dnaD	nth	TRUE	0.968	-3.000	0.007	NA	Y	NA
923014	923015	M5005_Spy_0730	M5005_Spy_0731	nth		FALSE	0.381	72.000	0.006	NA		NA
923015	923016	M5005_Spy_0731	M5005_Spy_0732			TRUE	0.632	91.000	0.283	NA		NA
923016	923017	M5005_Spy_0732	M5005_Spy_0733			TRUE	0.667	40.000	0.021	NA		NA
923017	923018	M5005_Spy_0733	M5005_Spy_0734		cpsFO	TRUE	0.559	58.000	0.059	1.000	N	NA
923018	923019	M5005_Spy_0734	M5005_Spy_0735	cpsFO	cpsFP	TRUE	0.980	0.000	0.149	1.000	Y	NA
923019	923020	M5005_Spy_0735	M5005_Spy_0736	cpsFP	cpsFQ	TRUE	0.534	244.000	0.350	1.000	Y	NA
923020	923021	M5005_Spy_0736	M5005_Spy_0737	cpsFQ		FALSE	0.046	221.000	0.000	1.000	N	NA
923021	923022	M5005_Spy_0737	M5005_Spy_0738			TRUE	0.576	58.000	0.074	NA		NA
923022	923023	M5005_Spy_0738	M5005_Spy_0739			TRUE	0.975	-10.000	0.324	NA		NA
923024	923025	M5005_Spy_0740	M5005_Spy_0741	fbp		FALSE	0.346	93.000	0.015	NA		NA
923026	923027	M5005_Spy_0742	M5005_Spy_0743			FALSE	0.069	182.000	0.000	NA		NA
923027	923028	M5005_Spy_0743	M5005_Spy_0744			TRUE	0.802	-10.000	0.000	NA		NA
923028	923029	M5005_Spy_0744	M5005_Spy_0745			FALSE	0.074	177.000	0.000	NA		NA
923029	923030	M5005_Spy_0745	M5005_Spy_0746			TRUE	0.994	-3.000	0.895	1.000		NA
923030	923031	M5005_Spy_0746	M5005_Spy_0747			FALSE	0.159	204.000	0.026	1.000		NA
923031	923032	M5005_Spy_0747	M5005_Spy_0748		estA	FALSE	0.400	133.000	0.143	NA		NA
923032	923033	M5005_Spy_0748	M5005_Spy_0749	estA		TRUE	0.827	30.000	0.150	NA		NA
923033	923034	M5005_Spy_0749	M5005_Spy_0750			TRUE	0.629	46.000	0.029	NA		NA
923034	923035	M5005_Spy_0750	M5005_Spy_0751		acoA	FALSE	0.033	285.000	0.000	1.000		NA
923035	923036	M5005_Spy_0751	M5005_Spy_0752	acoA	acoB	TRUE	0.995	56.000	0.769	0.001	Y	NA
923036	923037	M5005_Spy_0752	M5005_Spy_0753	acoB	acoC	TRUE	0.732	185.000	0.077	0.047	Y	NA
923040	923041	M5005_Spy_0756	M5005_Spy_0757		hylA	FALSE	0.013	446.000	0.000	NA		NA
923043	923044	M5005_Spy_0759	M5005_Spy_0760			TRUE	0.991	0.000	0.796	1.000		NA
923045	923046	M5005_Spy_0761	M5005_Spy_0762			TRUE	0.985	-3.000	0.502	NA		NA
923046	923047	M5005_Spy_0762	M5005_Spy_0763		femD	TRUE	0.668	54.000	0.150	NA		NA
923047	923048	M5005_Spy_0763	M5005_Spy_0764	femD		FALSE	0.222	134.000	0.003	NA		NA
923048	923049	M5005_Spy_0764	M5005_Spy_0765		hemN	TRUE	0.918	-3.000	0.021	NA		NA
923049	923050	M5005_Spy_0765	M5005_Spy_0766	hemN		TRUE	0.884	10.000	0.060	1.000	N	NA
923050	923051	M5005_Spy_0766	M5005_Spy_0767			TRUE	0.917	0.000	0.055	1.000	N	NA
923051	923052	M5005_Spy_0767	M5005_Spy_0768			TRUE	0.970	0.000	0.330	NA		NA
923052	923053	M5005_Spy_0768	M5005_Spy_0769			FALSE	0.013	480.000	0.000	NA		NA
923053	923054	M5005_Spy_0769	M5005_Spy_0770			TRUE	0.984	0.000	0.546	NA		NA
923054	923055	M5005_Spy_0770	M5005_Spy_0771			TRUE	0.993	-3.000	0.876	NA		NA
923055	923056	M5005_Spy_0771	M5005_Spy_0772			TRUE	0.970	-10.000	0.253	NA		NA
11400636	923050		M5005_Spy_0766			FALSE	NA	7944.000	0.000	NA		NA
11542999	923050		M5005_Spy_0766			FALSE	NA	7944.000	0.000	NA		NA
11685391	923050		M5005_Spy_0766			FALSE	NA	7944.000	0.000	NA		NA
11400637	923050		M5005_Spy_0766			FALSE	NA	7980.000	0.000	NA		NA
11543000	923050		M5005_Spy_0766			FALSE	NA	7980.000	0.000	NA		NA
11685392	923050		M5005_Spy_0766			FALSE	NA	7980.000	0.000	NA		NA
11400638	923050		M5005_Spy_0766			FALSE	NA	8010.000	0.000	NA		NA
11543001	923050		M5005_Spy_0766			FALSE	NA	8010.000	0.000	NA		NA
11685393	923050		M5005_Spy_0766			FALSE	NA	8010.000	0.000	NA		NA
11400639	923050		M5005_Spy_0766			FALSE	NA	8046.000	0.000	NA		NA
11543002	923050		M5005_Spy_0766			FALSE	NA	8046.000	0.000	NA		NA
11685394	923050		M5005_Spy_0766			FALSE	NA	8046.000	0.000	NA		NA
11400640	923050		M5005_Spy_0766			FALSE	NA	8076.000	0.000	NA		NA
11543003	923050		M5005_Spy_0766			FALSE	NA	8076.000	0.000	NA		NA
11685395	923050		M5005_Spy_0766			FALSE	NA	8076.000	0.000	NA		NA
11400641	923050		M5005_Spy_0766			FALSE	NA	8112.000	0.000	NA		NA
11543004	923050		M5005_Spy_0766			FALSE	NA	8112.000	0.000	NA		NA
11685396	923050		M5005_Spy_0766			FALSE	NA	8112.000	0.000	NA		NA
11400642	923050		M5005_Spy_0766			FALSE	NA	8142.000	0.000	NA		NA
11543005	923050		M5005_Spy_0766			FALSE	NA	8142.000	0.000	NA		NA
11685397	923050		M5005_Spy_0766			FALSE	NA	8142.000	0.000	NA		NA
923058	923059	M5005_Spy_0774	M5005_Spy_0775			TRUE	0.841	64.000	0.000	0.002		NA
923059	923060	M5005_Spy_0775	M5005_Spy_0776		lepA	FALSE	0.263	124.000	0.003	1.000		NA
923060	923061	M5005_Spy_0776	M5005_Spy_0777	lepA		FALSE	0.039	258.000	0.000	1.000		NA
923061	923062	M5005_Spy_0777	M5005_Spy_0778		msrB	FALSE	0.079	186.000	0.000	1.000		NA
923062	923063	M5005_Spy_0778	M5005_Spy_0779	msrB		FALSE	0.169	115.000	0.000	1.000		NA
923063	923064	M5005_Spy_0779	M5005_Spy_0780			FALSE	0.065	207.000	0.000	1.000		NA
923064	923065	M5005_Spy_0780	M5005_Spy_0781		ptsB	TRUE	0.998	19.000	0.786	0.020	Y	NA
923065	923066	M5005_Spy_0781	M5005_Spy_0782	ptsB	ptsC	TRUE	0.998	17.000	0.778	0.023	Y	NA
923066	923067	M5005_Spy_0782	M5005_Spy_0783	ptsC	ptsD	TRUE	0.999	-3.000	0.778	0.023	Y	NA
923067	923068	M5005_Spy_0783	M5005_Spy_0784	ptsD		TRUE	0.767	136.000	0.222	0.056	N	NA
923068	923069	M5005_Spy_0784	M5005_Spy_0785			TRUE	0.998	4.000	0.500	0.013	Y	NA
923069	923070	M5005_Spy_0785	M5005_Spy_0786			TRUE	0.988	-6.000	0.571	1.000	N	NA
923070	923071	M5005_Spy_0786	M5005_Spy_0787			FALSE	0.158	97.000	0.000	NA		NA
923071	923072	M5005_Spy_0787	M5005_Spy_0788			FALSE	0.020	335.000	0.000	NA		NA
923072	923073	M5005_Spy_0788	M5005_Spy_0789			TRUE	0.696	16.000	0.000	1.000		NA
923073	923074	M5005_Spy_0789	M5005_Spy_0790		gabD	TRUE	0.730	95.000	0.044	0.046		NA
923074	923075	M5005_Spy_0790	M5005_Spy_0791	gabD	uvrC	FALSE	0.157	102.000	0.000	1.000	N	NA
923075	923076	M5005_Spy_0791	M5005_Spy_0792	uvrC		FALSE	0.133	185.000	0.004	1.000	N	NA
923076	923077	M5005_Spy_0792	M5005_Spy_0793			TRUE	0.465	125.000	0.179	1.000	N	NA
923079	923080	M5005_Spy_0795	M5005_Spy_0796	rplJ	rplL	TRUE	0.991	65.000	0.884	0.027	Y	NA
923080	923081	M5005_Spy_0796	M5005_Spy_0797	rplL		FALSE	0.015	396.000	0.000	NA		NA
923081	923082	M5005_Spy_0797	M5005_Spy_0798			TRUE	0.802	-6.000	0.000	NA		NA
923082	923083	M5005_Spy_0798	M5005_Spy_0799			TRUE	0.791	-21.000	0.000	NA		NA
923083	923084	M5005_Spy_0799	M5005_Spy_0800			FALSE	0.262	59.000	0.000	NA		NA
923084	923085	M5005_Spy_0800	M5005_Spy_0801			FALSE	0.269	58.000	0.000	NA		NA
923085	923086	M5005_Spy_0801	M5005_Spy_0802			FALSE	0.124	133.000	0.000	NA		NA
923086	923087	M5005_Spy_0802	M5005_Spy_0803		srtI	FALSE	0.030	265.000	0.000	NA		NA
923087	923088	M5005_Spy_0803	M5005_Spy_0804	srtI	srtR	FALSE	0.105	151.000	0.000	NA		NA
923088	923089	M5005_Spy_0804	M5005_Spy_0805	srtR	srtK	TRUE	0.999	-7.000	0.741	0.013	Y	NA
923089	923090	M5005_Spy_0805	M5005_Spy_0806	srtK	srtA	FALSE	0.134	148.000	0.000	1.000		NA
923090	923091	M5005_Spy_0806	M5005_Spy_0807	srtA	srtT	FALSE	0.169	115.000	0.000	1.000		NA
923091	923092	M5005_Spy_0807	M5005_Spy_0808	srtT	srtF	TRUE	0.685	82.000	0.000	0.024		NA
923092	923093	M5005_Spy_0808	M5005_Spy_0809	srtF	srtE	TRUE	0.705	6.000	0.000	NA		NA
923093	923094	M5005_Spy_0809	M5005_Spy_0810	srtE	srtG	TRUE	0.976	3.000	0.490	NA		NA
923094	923095	M5005_Spy_0810	M5005_Spy_0811	srtG		FALSE	0.062	192.000	0.000	NA		NA
923097	923098	M5005_Spy_0813	M5005_Spy_0814			TRUE	0.589	22.000	0.000	NA		NA
923098	923099	M5005_Spy_0814	M5005_Spy_0815			FALSE	0.210	73.000	0.000	NA		NA
923099	923100	M5005_Spy_0815	M5005_Spy_0816			TRUE	0.867	31.000	0.000	0.068		NA
923100	923101	M5005_Spy_0816	M5005_Spy_0817		dacA1	FALSE	0.099	170.000	0.000	1.000		NA
923103	923104	M5005_Spy_0819	M5005_Spy_0820		folC.1	FALSE	0.169	89.000	0.000	NA		NA
923104	923105	M5005_Spy_0820	M5005_Spy_0821	folC.1	folE	TRUE	0.858	47.000	0.057	1.000	Y	NA
923105	923106	M5005_Spy_0821	M5005_Spy_0822	folE	folP	TRUE	0.965	9.000	0.073	1.000	Y	NA
923106	923107	M5005_Spy_0822	M5005_Spy_0823	folP	folQ	TRUE	0.967	7.000	0.094	1.000	Y	NA
923107	923108	M5005_Spy_0823	M5005_Spy_0824	folQ	folK	TRUE	0.982	-3.000	0.142	1.000	Y	NA
923108	923109	M5005_Spy_0824	M5005_Spy_0825	folK	murB	FALSE	0.234	150.000	0.010	1.000	N	NA
923109	923110	M5005_Spy_0825	M5005_Spy_0826	murB	potA	TRUE	0.644	46.000	0.041	1.000	N	NA
923110	923111	M5005_Spy_0826	M5005_Spy_0827	potA	potB	TRUE	0.999	-16.000	0.928	0.036	Y	NA
923111	923112	M5005_Spy_0827	M5005_Spy_0828	potB	potC	TRUE	0.998	-3.000	0.492	0.036	Y	NA
923112	923113	M5005_Spy_0828	M5005_Spy_0829	potC		TRUE	0.997	-7.000	0.253	0.036	Y	NA
923114	923115	M5005_Spy_0830	M5005_Spy_0831	dpiA	dpiB	TRUE	0.983	-19.000	0.154	1.000	Y	NA
923116	923117	M5005_Spy_0832	M5005_Spy_0833	malP		TRUE	0.971	31.000	0.432	1.000	Y	NA
923119	923120	M5005_Spy_0835	M5005_Spy_0836			TRUE	0.990	-57.000	0.035	0.002		NA
923120	923121	M5005_Spy_0836	M5005_Spy_0837			FALSE	0.088	178.000	0.000	1.000		NA
923121	923122	M5005_Spy_0837	M5005_Spy_0838			FALSE	0.261	163.000	0.071	1.000	N	NA
923122	923123	M5005_Spy_0838	M5005_Spy_0839			FALSE	0.215	180.000	0.071	NA		NA
923123	923124	M5005_Spy_0839	M5005_Spy_0840		radC	TRUE	0.611	49.000	0.046	NA		NA
923125	923126	M5005_Spy_0841	M5005_Spy_0842			TRUE	0.984	10.000	0.714	1.000		NA
923126	923127	M5005_Spy_0842	M5005_Spy_0843			FALSE	0.120	252.000	0.083	NA		NA
923127	923128	M5005_Spy_0843	M5005_Spy_0844		nifS2	TRUE	0.956	-10.000	0.166	NA		NA
923128	923129	M5005_Spy_0844	M5005_Spy_0845	nifS2		TRUE	0.980	-3.000	0.089	1.000	Y	NA
923129	923130	M5005_Spy_0845	M5005_Spy_0846			FALSE	0.417	140.000	0.145	1.000		NA
923131	923132	M5005_Spy_0847	M5005_Spy_0848			TRUE	0.991	-25.000	0.725	1.000		NA
923132	923133	M5005_Spy_0848	M5005_Spy_0849			TRUE	0.950	-3.000	0.150	1.000	N	NA
923133	923134	M5005_Spy_0849	M5005_Spy_0850		pta	TRUE	0.912	4.000	0.067	1.000		NA
923134	923135	M5005_Spy_0850	M5005_Spy_0851	pta		TRUE	0.982	-3.000	0.031	0.046		NA
923135	923136	M5005_Spy_0851	M5005_Spy_0852			TRUE	0.671	127.000	0.031	0.046		NA
923136	923137	M5005_Spy_0852	M5005_Spy_0853			TRUE	0.916	-3.000	0.018	NA		NA
923139	923140	M5005_Spy_0855	M5005_Spy_0856	proV		TRUE	0.980	-7.000	0.382	1.000	N	NA
923140	923141	M5005_Spy_0856	M5005_Spy_0857		guaC	FALSE	0.029	278.000	0.000	1.000	N	NA
923141	923142	M5005_Spy_0857	M5005_Spy_0858	guaC	xpt	FALSE	0.175	305.000	0.009	1.000	Y	NA
923142	923143	M5005_Spy_0858	M5005_Spy_0859	xpt		TRUE	0.973	0.000	0.046	1.000	Y	NA
923144	923145	M5005_Spy_0860	M5005_Spy_0861	apbE		TRUE	0.737	53.000	0.189	1.000		NA
923146	923147	M5005_Spy_0862	M5005_Spy_0863	tdk2	prfA	TRUE	0.737	35.000	0.062	1.000	N	NA
923147	923148	M5005_Spy_0863	M5005_Spy_0864	prfA	hemK	TRUE	0.976	0.000	0.084	1.000	Y	NA
923148	923149	M5005_Spy_0864	M5005_Spy_0865	hemK		TRUE	0.974	-16.000	0.029	NA	Y	NA
923149	923150	M5005_Spy_0865	M5005_Spy_0866			TRUE	0.818	18.000	0.012	NA		NA
923150	923151	M5005_Spy_0866	M5005_Spy_0867		glyA	TRUE	0.938	-10.000	0.056	1.000		NA
923151	923152	M5005_Spy_0867	M5005_Spy_0868	glyA		TRUE	0.701	7.000	0.000	NA		NA
923152	923153	M5005_Spy_0868	M5005_Spy_0869			TRUE	0.751	1.000	0.000	NA		NA
923153	923154	M5005_Spy_0869	M5005_Spy_0870			TRUE	0.871	10.000	0.035	NA		NA
923154	923155	M5005_Spy_0870	M5005_Spy_0871			TRUE	0.999	-3.000	0.895	0.007	Y	NA
923155	923156	M5005_Spy_0871	M5005_Spy_0872		nox	FALSE	0.015	541.000	0.000	1.000		NA
923158	923159	M5005_Spy_0874	M5005_Spy_0875	gyrA		TRUE	0.785	20.000	0.013	NA	N	NA
923159	923160	M5005_Spy_0875	M5005_Spy_0876			FALSE	0.399	80.000	0.039	NA	N	NA
923160	923161	M5005_Spy_0876	M5005_Spy_0877			FALSE	0.013	487.000	0.000	NA		NA
923161	923162	M5005_Spy_0877	M5005_Spy_0878			TRUE	0.699	8.000	0.000	NA		NA
923163	923164	M5005_Spy_0879	M5005_Spy_0880			FALSE	0.446	117.000	0.135	1.000		NA
923164	923165	M5005_Spy_0880	M5005_Spy_0881			TRUE	0.954	-3.000	0.146	1.000		NA
923166	923167	M5005_Spy_0882	M5005_Spy_0883			TRUE	0.956	-10.000	0.148	1.000		NA
923167	923168	M5005_Spy_0883	M5005_Spy_0884		smf	TRUE	0.767	65.000	0.037	1.000	Y	NA
923168	923169	M5005_Spy_0884	M5005_Spy_0885	smf		TRUE	0.788	107.000	0.238	1.000	Y	NA
923170	923171	M5005_Spy_0886	M5005_Spy_0887			TRUE	0.701	7.000	0.000	NA		NA
923171	923172	M5005_Spy_0887	M5005_Spy_0888			FALSE	0.113	146.000	0.000	NA		NA
923173	923174	M5005_Spy_0889	M5005_Spy_0890		ddh	TRUE	0.909	15.000	0.158	NA		NA
923174	923175	M5005_Spy_0890	M5005_Spy_0891	ddh	satD	FALSE	0.372	105.000	0.056	NA		NA
923175	923176	M5005_Spy_0891	M5005_Spy_0892	satD	satE	TRUE	0.970	-7.000	0.250	NA		NA
923176	923177	M5005_Spy_0892	M5005_Spy_0893	satE	gid	FALSE	0.217	151.000	0.008	NA		NA
923177	923178	M5005_Spy_0893	M5005_Spy_0894	gid	oadA2	FALSE	0.198	153.000	0.005	1.000	N	NA
923178	923179	M5005_Spy_0894	M5005_Spy_0895	oadA2		TRUE	0.830	43.000	0.250	NA		NA
923179	923180	M5005_Spy_0895	M5005_Spy_0896			TRUE	0.982	0.000	0.500	NA		NA
923180	923181	M5005_Spy_0896	M5005_Spy_0897			TRUE	0.885	10.000	0.062	1.000	N	NA
923182	923183	M5005_Spy_0898	M5005_Spy_0899		citG	TRUE	0.991	-7.000	0.700	1.000	N	NA
923183	923184	M5005_Spy_0899	M5005_Spy_0900	citG		TRUE	0.558	158.000	0.400	1.000	N	NA
923185	923186	M5005_Spy_0901	M5005_Spy_0902			TRUE	0.602	54.000	0.077	NA		NA
923186	923187	M5005_Spy_0902	M5005_Spy_0903		oadB	TRUE	0.943	45.000	0.103	0.004	N	NA
923187	923188	M5005_Spy_0903	M5005_Spy_0904	oadB		TRUE	0.991	18.000	0.273	0.002		NA
923188	923189	M5005_Spy_0904	M5005_Spy_0905		citD	TRUE	0.837	36.000	0.192	1.000		NA
923189	923190	M5005_Spy_0905	M5005_Spy_0906	citD	citE	TRUE	0.990	18.000	0.284	0.002	N	NA
923190	923191	M5005_Spy_0906	M5005_Spy_0907	citE	citF	TRUE	0.990	3.000	0.119	0.001	N	NA
923191	923192	M5005_Spy_0907	M5005_Spy_0908	citF	citX	TRUE	0.942	-70.000	0.138	1.000	N	NA
923192	923193	M5005_Spy_0908	M5005_Spy_0909	citX	oadA1	TRUE	0.894	15.000	0.123	1.000	N	NA
923194	923195	M5005_Spy_0910	M5005_Spy_0911	citC		FALSE	0.201	89.000	0.000	1.000		NA
923199	923200	M5005_Spy_0915	M5005_Spy_0916	ffh	ylxM	TRUE	0.914	15.000	0.151	1.000		NA
923200	923201	M5005_Spy_0916	M5005_Spy_0917	ylxM		TRUE	0.754	89.000	0.032	0.040		NA
923201	923202	M5005_Spy_0917	M5005_Spy_0918			FALSE	0.427	83.000	0.057	NA		NA
923204	923205	M5005_Spy_0920	M5005_Spy_0921			FALSE	0.022	365.000	0.000	1.000		NA
923205	923206	M5005_Spy_0921	M5005_Spy_0922		pdxK	FALSE	0.304	134.000	0.040	NA		NA
923206	923207	M5005_Spy_0922	M5005_Spy_0923	pdxK		TRUE	0.946	-22.000	0.142	NA		NA
923209	923210	M5005_Spy_0925	M5005_Spy_0926	rnhB		FALSE	0.026	322.000	0.000	1.000		NA
923210	923211	M5005_Spy_0926	M5005_Spy_0927		fhs.1	TRUE	0.461	85.000	0.094	1.000	N	NA
923211	923212	M5005_Spy_0927	M5005_Spy_0928	fhs.1	lplA	TRUE	0.487	128.000	0.200	1.000	N	NA
923212	923213	M5005_Spy_0928	M5005_Spy_0929	lplA		TRUE	0.810	47.000	0.250	1.000	N	NA
923213	923214	M5005_Spy_0929	M5005_Spy_0930			TRUE	0.973	-7.000	0.286	NA		NA
923214	923215	M5005_Spy_0930	M5005_Spy_0931			TRUE	0.943	-7.000	0.107	NA		NA
923215	923216	M5005_Spy_0931	M5005_Spy_0932			TRUE	0.922	42.000	0.571	NA	N	NA
923216	923217	M5005_Spy_0932	M5005_Spy_0933			TRUE	0.978	-3.000	0.100	NA	Y	NA
923217	923218	M5005_Spy_0933	M5005_Spy_0934			TRUE	0.918	-3.000	0.019	1.000	N	NA
923219	923220	M5005_Spy_0935	M5005_Spy_0936	dpfB	dfp	TRUE	0.903	-7.000	0.002	1.000		NA
923220	923221	M5005_Spy_0936	M5005_Spy_0937	dfp		TRUE	0.514	58.000	0.019	NA		NA
923221	923222	M5005_Spy_0937	M5005_Spy_0938		pgmA	FALSE	0.243	176.000	0.098	NA		NA
923223	923224	M5005_Spy_0939	M5005_Spy_0940			TRUE	0.996	2.000	0.720	0.036		NA
923224	923225	M5005_Spy_0940	M5005_Spy_0941			TRUE	0.984	-7.000	0.438	1.000		NA
923225	923226	M5005_Spy_0941	M5005_Spy_0942			FALSE	0.351	121.000	0.036	1.000		NA
923226	923227	M5005_Spy_0942	M5005_Spy_0943		cdd	TRUE	0.659	94.000	0.300	1.000		NA
923227	923228	M5005_Spy_0943	M5005_Spy_0944	cdd		FALSE	0.011	659.000	0.000	1.000	N	NA
923229	923230	M5005_Spy_0945	M5005_Spy_0946	coaA	rpsT	FALSE	0.439	69.000	0.014	1.000	N	NA
923231	923232	M5005_Spy_0947	M5005_Spy_0948	ciaH	ciaR	TRUE	0.996	-7.000	0.606	1.000	Y	NA
923232	923233	M5005_Spy_0948	M5005_Spy_0949	ciaR	pepN	FALSE	0.064	346.000	0.061	1.000	N	NA
923233	923234	M5005_Spy_0949	M5005_Spy_0950	pepN	phoU	FALSE	0.153	205.000	0.067	NA	N	NA
923234	923235	M5005_Spy_0950	M5005_Spy_0951	phoU	pstB	TRUE	0.903	68.000	0.413	NA	Y	NA
923235	923236	M5005_Spy_0951	M5005_Spy_0952	pstB	pstB2	TRUE	0.998	13.000	0.542	0.001	Y	NA
923236	923237	M5005_Spy_0952	M5005_Spy_0953	pstB2	pstA	TRUE	0.998	16.000	0.490	0.002	Y	NA
923237	923238	M5005_Spy_0953	M5005_Spy_0954	pstA	pstC	TRUE	1.000	-10.000	0.907	0.002	Y	NA
923238	923239	M5005_Spy_0954	M5005_Spy_0955	pstC	pstS	TRUE	0.739	127.000	0.206	1.000	Y	NA
923239	923240	M5005_Spy_0955	M5005_Spy_0956	pstS		TRUE	0.538	139.000	0.303	NA	N	NA
923240	923241	M5005_Spy_0956	M5005_Spy_0957			TRUE	0.947	3.000	0.229	NA	N	NA
923241	923242	M5005_Spy_0957	M5005_Spy_0958			TRUE	0.977	-10.000	0.337	NA		NA
923242	923243	M5005_Spy_0958	M5005_Spy_0959			TRUE	0.940	2.000	0.169	NA		NA
923243	923244	M5005_Spy_0959	M5005_Spy_0960		mreA	TRUE	0.640	43.000	0.017	1.000	N	NA
923244	923245	M5005_Spy_0960	M5005_Spy_0961	mreA	truB	TRUE	0.907	29.000	0.308	1.000	N	NA
923245	923246	M5005_Spy_0961	M5005_Spy_0962	truB		FALSE	0.304	116.000	0.014	NA		NA
923246	923247	M5005_Spy_0962	M5005_Spy_0963			FALSE	0.373	97.000	0.045	NA		NA
923247	923248	M5005_Spy_0963	M5005_Spy_0964			TRUE	0.874	11.000	0.045	NA		NA
923248	923249	M5005_Spy_0964	M5005_Spy_0965			TRUE	0.483	92.000	0.121	1.000		NA
923249	923250	M5005_Spy_0965	M5005_Spy_0966			TRUE	0.959	20.000	0.091	0.073		NA
923250	923251	M5005_Spy_0966	M5005_Spy_0967			TRUE	0.966	15.000	0.438	1.000		NA
923253	923254	M5005_Spy_0969	M5005_Spy_0970			TRUE	0.730	3.000	0.000	NA		NA
923254	923255	M5005_Spy_0970	M5005_Spy_0971			FALSE	0.417	163.000	0.238	NA		NA
923255	923256	M5005_Spy_0971	M5005_Spy_0972			TRUE	0.978	11.000	0.600	NA		NA
923256	923257	M5005_Spy_0972	M5005_Spy_0973			TRUE	0.933	41.000	0.600	NA		NA
923257	923258	M5005_Spy_0973	M5005_Spy_0974			TRUE	0.878	13.000	0.060	NA		NA
923258	923259	M5005_Spy_0974	M5005_Spy_0975			TRUE	0.911	11.000	0.143	NA		NA
923259	923260	M5005_Spy_0975	M5005_Spy_0976			TRUE	0.791	61.000	0.357	NA		NA
923260	923261	M5005_Spy_0976	M5005_Spy_0977		pcrA	FALSE	0.018	406.000	0.000	1.000		NA
923261	923262	M5005_Spy_0977	M5005_Spy_0979	pcrA		FALSE	0.017	368.000	0.000	NA		NA
923263	923264	M5005_Spy_0978	M5005_Spy_0980			TRUE	0.665	120.000	0.060	0.073	N	NA
923265	923266	M5005_Spy_0981	M5005_Spy_0982	cfa		FALSE	0.017	370.000	0.000	NA		NA
923266	923267	M5005_Spy_0982	M5005_Spy_0983			TRUE	0.966	16.000	0.154	1.000	Y	NA
923267	923268	M5005_Spy_0983	M5005_Spy_0984			TRUE	0.968	10.000	0.130	1.000	Y	NA
923268	923269	M5005_Spy_0984	M5005_Spy_0985			FALSE	0.337	106.000	0.018	1.000	N	NA
923269	923270	M5005_Spy_0985	M5005_Spy_0986		glmS	FALSE	0.130	196.000	0.008	1.000	N	NA
923270	923271	M5005_Spy_0986	M5005_Spy_0987	glmS	sipC	FALSE	0.172	176.000	0.011	1.000	N	NA
923271	923272	M5005_Spy_0987	M5005_Spy_0988	sipC	pyk	FALSE	0.153	218.000	0.072	1.000	N	NA
923272	923273	M5005_Spy_0988	M5005_Spy_0989	pyk	pfk	TRUE	0.974	63.000	0.261	0.006	Y	NA
923273	923274	M5005_Spy_0989	M5005_Spy_0990	pfk	dnaE	TRUE	0.491	80.000	0.098	1.000	N	NA
923275	923276	M5005_Spy_0991	M5005_Spy_0992			TRUE	0.977	0.000	0.412	1.000	N	NA
923276	923277	M5005_Spy_0992	M5005_Spy_0993			TRUE	0.970	10.000	0.471	NA		NA
923278	923279	M5005_Spy_0994	M5005_Spy_0995			FALSE	0.011	591.000	0.000	NA		NA
923281	923282	M5005_Spy_0997	M5005_Spy_0998			TRUE	0.767	0.000	0.000	NA		NA
923282	923283	M5005_Spy_0998	M5005_Spy_0999			TRUE	0.687	10.000	0.000	NA		NA
923283	923284	M5005_Spy_0999	M5005_Spy_1000			TRUE	0.685	11.000	0.000	NA		NA
923284	923285	M5005_Spy_1000	M5005_Spy_1001			TRUE	0.683	12.000	0.000	NA		NA
923285	923286	M5005_Spy_1001	M5005_Spy_1002			TRUE	0.741	2.000	0.000	NA		NA
923286	923287	M5005_Spy_1002	M5005_Spy_1003			TRUE	0.988	0.000	0.667	NA		NA
923287	923288	M5005_Spy_1003	M5005_Spy_1004			TRUE	0.989	-31.000	0.667	NA		NA
923288	923289	M5005_Spy_1004	M5005_Spy_1005			TRUE	0.994	-28.000	1.000	NA		NA
923289	923290	M5005_Spy_1005	M5005_Spy_1006			TRUE	0.952	11.000	0.300	NA		NA
923290	923291	M5005_Spy_1006	M5005_Spy_1007			FALSE	0.139	116.000	0.000	NA		NA
923291	923292	M5005_Spy_1007	M5005_Spy_1008			TRUE	0.971	1.000	0.333	1.000		NA
923292	923293	M5005_Spy_1008	M5005_Spy_1009			TRUE	0.929	1.000	0.125	NA		NA
923293	923294	M5005_Spy_1009	M5005_Spy_1010			TRUE	0.989	-7.000	0.625	NA		NA
923294	923295	M5005_Spy_1010	M5005_Spy_1011			TRUE	0.994	-27.000	0.929	NA		NA
923295	923296	M5005_Spy_1011	M5005_Spy_1012			TRUE	0.904	13.000	0.134	NA		NA
923296	923297	M5005_Spy_1012	M5005_Spy_1013			TRUE	0.875	12.000	0.052	NA		NA
923297	923298	M5005_Spy_1013	M5005_Spy_1014			TRUE	0.989	2.000	0.800	NA		NA
923298	923299	M5005_Spy_1014	M5005_Spy_1015			TRUE	0.794	-3.000	0.000	NA		NA
923299	923300	M5005_Spy_1015	M5005_Spy_1016			TRUE	0.794	-3.000	0.000	NA		NA
923300	923301	M5005_Spy_1016	M5005_Spy_1017			TRUE	0.802	14.000	0.002	NA		NA
923301	923302	M5005_Spy_1017	M5005_Spy_1018			TRUE	0.809	13.000	0.002	NA		NA
923302	923303	M5005_Spy_1018	M5005_Spy_1019			TRUE	0.952	19.000	0.400	NA		NA
923303	923304	M5005_Spy_1019	M5005_Spy_1020			FALSE	0.037	245.000	0.000	NA		NA
923304	923305	M5005_Spy_1020	M5005_Spy_1021			TRUE	0.701	7.000	0.000	NA		NA
923305	923306	M5005_Spy_1021	M5005_Spy_1022			TRUE	0.961	-31.000	0.214	NA		NA
923306	923307	M5005_Spy_1022	M5005_Spy_1023			TRUE	0.933	0.000	0.118	NA		NA
923307	923308	M5005_Spy_1023	M5005_Spy_1024			TRUE	0.950	-10.000	0.118	1.000		NA
923308	923309	M5005_Spy_1024	M5005_Spy_1025			FALSE	0.011	610.000	0.000	NA		NA
923309	923310	M5005_Spy_1025	M5005_Spy_1026			FALSE	0.027	286.000	0.000	NA		NA
923310	923311	M5005_Spy_1026	M5005_Spy_1027			TRUE	0.984	-3.000	0.500	NA		NA
923311	923312	M5005_Spy_1027	M5005_Spy_1028			TRUE	0.730	3.000	0.000	NA		NA
923312	923313	M5005_Spy_1028	M5005_Spy_1029			TRUE	0.741	2.000	0.000	NA		NA
923313	923314	M5005_Spy_1029	M5005_Spy_1030			TRUE	0.794	-3.000	0.000	NA		NA
923314	923315	M5005_Spy_1030	M5005_Spy_1031			TRUE	0.787	-27.000	0.000	NA		NA
923315	923316	M5005_Spy_1031	M5005_Spy_1032			TRUE	0.794	-3.000	0.000	NA		NA
923316	923317	M5005_Spy_1032	M5005_Spy_1033			TRUE	0.794	-3.000	0.000	NA		NA
923317	923318	M5005_Spy_1033	M5005_Spy_1034			TRUE	0.917	-3.000	0.018	NA		NA
923318	923319	M5005_Spy_1034	M5005_Spy_1035			TRUE	0.767	0.000	0.000	NA		NA
923319	923320	M5005_Spy_1035	M5005_Spy_1036		ssb2	TRUE	0.705	6.000	0.000	NA		NA
923320	923321	M5005_Spy_1036	M5005_Spy_1037	ssb2	ssb1	TRUE	0.946	-7.000	0.125	NA		NA
923321	923322	M5005_Spy_1037	M5005_Spy_1038	ssb1		TRUE	0.929	1.000	0.125	NA		NA
923322	923323	M5005_Spy_1038	M5005_Spy_1039			TRUE	0.926	22.000	0.286	NA		NA
923323	923324	M5005_Spy_1039	M5005_Spy_1040			TRUE	0.989	-19.000	0.667	NA		NA
923324	923325	M5005_Spy_1040	M5005_Spy_1041			TRUE	0.981	13.000	0.667	NA		NA
923325	923326	M5005_Spy_1041	M5005_Spy_1042			TRUE	0.990	-9.000	0.667	NA		NA
923326	923327	M5005_Spy_1042	M5005_Spy_1043			TRUE	0.990	-13.000	0.667	NA		NA
923334	923335	M5005_Spy_1050	M5005_Spy_1051			FALSE	0.433	36.000	0.000	NA		NA
923335	923336	M5005_Spy_1051	M5005_Spy_1052		int.1	FALSE	0.134	121.000	0.000	NA		NA
923336	923337	M5005_Spy_1052	M5005_Spy_1053	int.1		FALSE	0.125	132.000	0.000	NA		NA
923337	923338	M5005_Spy_1053	M5005_Spy_1054			FALSE	0.137	118.000	0.000	NA		NA
923339	923340	M5005_Spy_1055	M5005_Spy_1056	glgP	malM	TRUE	0.987	35.000	0.289	0.023	Y	NA
923340	923341	M5005_Spy_1056	M5005_Spy_1057	malM	malR	TRUE	0.748	115.000	0.538	1.000	N	NA
923342	923343	M5005_Spy_1058	M5005_Spy_1059	malE	malF	TRUE	0.733	505.000	0.690	0.035	Y	NA
923343	923344	M5005_Spy_1059	M5005_Spy_1060	malF	malG	TRUE	0.999	0.000	0.793	0.035	Y	NA
923344	923345	M5005_Spy_1060	M5005_Spy_1061	malG		TRUE	0.649	155.000	0.069	0.038		NA
923346	923347	M5005_Spy_1062	M5005_Spy_1063	malA	malD	TRUE	0.901	22.000	0.200	NA		NA
923347	923348	M5005_Spy_1063	M5005_Spy_1064	malD	malC	TRUE	0.999	-3.000	0.714	0.035	Y	NA
923348	923349	M5005_Spy_1064	M5005_Spy_1065	malC	amyA	TRUE	0.751	75.000	0.067	1.000	Y	NA
923349	923350	M5005_Spy_1065	M5005_Spy_1066	amyA	amyB	TRUE	0.984	26.000	0.024	0.008	Y	NA
923350	923351	M5005_Spy_1066	M5005_Spy_1067	amyB	malX	TRUE	0.521	166.000	0.065	1.000	Y	NA
923353	923354	M5005_Spy_1069	M5005_Spy_1070		dltD	TRUE	0.727	31.000	0.042	NA	N	NA
923354	923355	M5005_Spy_1070	M5005_Spy_1071	dltD		TRUE	0.981	-7.000	0.409	NA		NA
923355	923356	M5005_Spy_1071	M5005_Spy_1072			TRUE	0.953	18.000	0.387	NA		NA
923356	923357	M5005_Spy_1072	M5005_Spy_1073		dltA	TRUE	0.980	-3.000	0.435	NA	N	NA
923357	923358	M5005_Spy_1073	M5005_Spy_1074	dltA		TRUE	0.975	12.000	0.549	NA		NA
923358	923359	M5005_Spy_1074	M5005_Spy_1075		uvrB	FALSE	0.031	264.000	0.000	NA		NA
923360	923361	M5005_Spy_1076	M5005_Spy_1077	glnH	glnQ.2	TRUE	0.989	0.000	0.326	1.000	Y	NA
923362	923363	M5005_Spy_1078	M5005_Spy_1079			TRUE	0.957	-3.000	0.182	NA		NA
923363	923364	M5005_Spy_1079	M5005_Spy_1080			FALSE	0.393	178.000	0.273	NA		NA
923364	923365	M5005_Spy_1080	M5005_Spy_1081			TRUE	0.984	-3.000	0.500	NA		NA
923365	923366	M5005_Spy_1081	M5005_Spy_1082			TRUE	0.998	3.000	0.500	0.014	Y	NA
923366	923367	M5005_Spy_1082	M5005_Spy_1083			TRUE	0.965	23.000	0.064	0.014	N	NA
923367	923368	M5005_Spy_1083	M5005_Spy_1084			FALSE	0.410	106.000	0.064	1.000		NA
923368	923369	M5005_Spy_1084	M5005_Spy_1085		bglA.2	TRUE	0.976	9.000	0.500	1.000		NA
923371	923372	M5005_Spy_1087	M5005_Spy_1088		obgE	FALSE	0.409	69.000	0.009	NA		NA
923372	923373	M5005_Spy_1088	M5005_Spy_1089	obgE		FALSE	0.455	63.000	0.011	NA		NA
923374	923375	M5005_Spy_1090	M5005_Spy_1091			TRUE	0.609	173.000	0.000	0.064	Y	NA
923380	923381	M5005_Spy_1096	M5005_Spy_1097			FALSE	0.177	85.000	0.000	NA		NA
923381	923382	M5005_Spy_1097	M5005_Spy_1098			FALSE	0.029	305.000	0.000	1.000		NA
923382	923383	M5005_Spy_1098	M5005_Spy_1099			TRUE	0.472	82.000	0.093	1.000	N	NA
923383	923384	M5005_Spy_1099	M5005_Spy_1100		aroK	FALSE	0.186	208.000	0.111	1.000	N	NA
923384	923385	M5005_Spy_1100	M5005_Spy_1101	aroK		TRUE	0.975	-7.000	0.012	1.000	Y	NA
923385	923386	M5005_Spy_1101	M5005_Spy_1102			FALSE	0.301	102.000	0.003	1.000		NA
923386	923387	M5005_Spy_1102	M5005_Spy_1103		map	TRUE	0.973	2.000	0.373	1.000		NA
923387	923388	M5005_Spy_1103	M5005_Spy_1104	map		TRUE	0.932	16.000	0.235	1.000	N	NA
923388	923389	M5005_Spy_1104	M5005_Spy_1105			TRUE	0.961	9.000	0.342	1.000	N	NA
923389	923390	M5005_Spy_1105	M5005_Spy_1106		grab	FALSE	0.048	238.000	0.000	1.000		NA
923390	923391	M5005_Spy_1106	M5005_Spy_1107	grab	murZ	FALSE	0.023	358.000	0.000	1.000		NA
923391	923392	M5005_Spy_1107	M5005_Spy_1108	murZ	metK2	FALSE	0.200	174.000	0.026	1.000	N	NA
923392	923393	M5005_Spy_1108	M5005_Spy_1109	metK2	inlA	FALSE	0.015	537.000	0.000	1.000		NA
923395	923396	M5005_Spy_1111	M5005_Spy_1112			TRUE	0.935	-10.000	0.067	NA		NA
923396	923397	M5005_Spy_1112	M5005_Spy_1113			TRUE	0.899	0.000	0.030	NA	N	NA
923399	923400	M5005_Spy_1115	M5005_Spy_1116		udk	FALSE	0.370	80.000	0.010	NA		NA
923402	923403	M5005_Spy_1118	M5005_Spy_1119		gapN	FALSE	0.365	95.000	0.028	1.000	N	NA
923403	923404	M5005_Spy_1119	M5005_Spy_1120	gapN	pstI	FALSE	0.182	185.000	0.035	1.000	N	NA
923404	923405	M5005_Spy_1120	M5005_Spy_1121	pstI	ptsH	TRUE	0.996	5.000	0.240	0.014	Y	NA
923406	923407	M5005_Spy_1122	M5005_Spy_1123	nrdH	nrdE.2	TRUE	0.967	20.000	0.562	1.000	N	NA
923407	923408	M5005_Spy_1123	M5005_Spy_1124	nrdE.2	nrdF.2	TRUE	0.840	333.000	0.500	0.002	Y	NA
923408	923409	M5005_Spy_1124	M5005_Spy_1125	nrdF.2		TRUE	0.935	-25.000	0.083	1.000	N	NA
923409	923410	M5005_Spy_1125	M5005_Spy_1126			FALSE	0.059	216.000	0.000	1.000		NA
923410	923411	M5005_Spy_1126	M5005_Spy_1127			TRUE	0.464	33.000	0.000	NA		NA
923411	923412	M5005_Spy_1127	M5005_Spy_1128			FALSE	0.022	313.000	0.000	NA		NA
923413	923414	M5005_Spy_1129	M5005_Spy_1130			TRUE	0.858	19.000	0.077	NA		NA
923414	923415	M5005_Spy_1130	M5005_Spy_1131			TRUE	0.977	-3.000	0.362	NA		NA
923415	923416	M5005_Spy_1131	M5005_Spy_1132		alaS	FALSE	0.019	355.000	0.000	1.000	N	NA
923416	923417	M5005_Spy_1132	M5005_Spy_1133	alaS	surA	FALSE	0.016	387.000	0.000	1.000	N	NA
923417	923418	M5005_Spy_1133	M5005_Spy_1134	surA		TRUE	0.493	63.000	0.012	1.000		NA
923418	923419	M5005_Spy_1134	M5005_Spy_1135			TRUE	0.468	66.000	0.012	1.000		NA
923419	923420	M5005_Spy_1135	M5005_Spy_1136		pepB	FALSE	0.017	376.000	0.000	1.000	N	NA
923420	923421	M5005_Spy_1136	M5005_Spy_1137	pepB		TRUE	0.932	13.000	0.204	NA		NA
923421	923422	M5005_Spy_1137	M5005_Spy_1138			FALSE	0.069	295.000	0.020	NA		NA
923422	923423	M5005_Spy_1138	M5005_Spy_1139		nagB	FALSE	0.340	119.000	0.051	1.000	N	NA
923424	923425	M5005_Spy_1140	M5005_Spy_1141	queA		TRUE	0.831	7.000	0.004	NA		NA
923426	923427	M5005_Spy_1142	M5005_Spy_1143			TRUE	0.794	-3.000	0.000	NA		NA
923427	923428	M5005_Spy_1143	M5005_Spy_1144			TRUE	0.798	-15.000	0.000	NA		NA
923428	923429	M5005_Spy_1144	M5005_Spy_1145		sodA	FALSE	0.085	167.000	0.000	NA		NA
923429	923430	M5005_Spy_1145	M5005_Spy_1146	sodA		FALSE	0.330	97.000	0.012	1.000	N	NA
923430	923431	M5005_Spy_1146	M5005_Spy_1147		comEC	TRUE	0.620	71.000	0.163	1.000		NA
923431	923432	M5005_Spy_1147	M5005_Spy_1148	comEC		TRUE	0.950	-19.000	0.130	1.000		NA
923432	923433	M5005_Spy_1148	M5005_Spy_1149			FALSE	0.139	200.000	0.014	1.000	N	NA
923434	923435	M5005_Spy_1150	M5005_Spy_1151			TRUE	0.968	-10.000	0.209	1.000		NA
923436	923437	M5005_Spy_1152	M5005_Spy_1153			TRUE	0.985	-48.000	0.000	0.001		NA
923437	923438	M5005_Spy_1153	M5005_Spy_1154		deaD	FALSE	0.284	128.000	0.007	1.000		NA
923438	923439	M5005_Spy_1154	M5005_Spy_1155	deaD	prfC	FALSE	0.112	307.000	0.000	1.000	Y	NA
923439	923440	M5005_Spy_1155	M5005_Spy_1156	prfC		FALSE	0.072	248.000	0.003	NA		NA
923440	923441	M5005_Spy_1156	M5005_Spy_1157		murF	TRUE	0.470	80.000	0.078	NA		NA
923441	923442	M5005_Spy_1157	M5005_Spy_1158	murF	ddlA	TRUE	0.782	191.000	0.046	0.009	Y	NA
923442	923443	M5005_Spy_1158	M5005_Spy_1159	ddlA	recR	FALSE	0.316	101.000	0.010	1.000	N	NA
923443	923444	M5005_Spy_1159	M5005_Spy_1160	recR		FALSE	0.350	47.000	0.000	NA		NA
923444	923445	M5005_Spy_1160	M5005_Spy_1161			FALSE	0.012	561.000	0.000	NA		NA
923445	923446	M5005_Spy_1161	M5005_Spy_1162			FALSE	0.378	124.000	0.105	NA		NA
923446	923447	M5005_Spy_1162	M5005_Spy_1163			FALSE	0.288	161.000	0.107	NA		NA
923447	923448	M5005_Spy_1163	M5005_Spy_1164		gpmA	FALSE	0.338	107.000	0.012	1.000		NA
923450	923451	M5005_Spy_1166	M5005_Spy_1167			FALSE	0.434	72.000	0.018	NA		NA
923451	923452	M5005_Spy_1167	M5005_Spy_1168			FALSE	0.012	531.000	0.000	NA		NA
923453	923454	M5005_Spy_1169	M5005_Spy_1170	spd3		FALSE	0.050	211.000	0.000	NA		NA
923455	923456	M5005_Spy_1171	M5005_Spy_1172			FALSE	0.139	116.000	0.000	NA		NA
923456	923457	M5005_Spy_1172	M5005_Spy_1173			TRUE	0.794	-3.000	0.000	NA		NA
923457	923458	M5005_Spy_1173	M5005_Spy_1174			TRUE	0.687	10.000	0.000	NA		NA
923458	923459	M5005_Spy_1174	M5005_Spy_1175			TRUE	0.794	-3.000	0.000	NA		NA
923459	923460	M5005_Spy_1175	M5005_Spy_1176			TRUE	0.683	12.000	0.000	NA		NA
923460	923461	M5005_Spy_1176	M5005_Spy_1177			TRUE	0.794	-3.000	0.000	NA		NA
923461	923462	M5005_Spy_1177	M5005_Spy_1178			TRUE	0.958	-3.000	0.188	NA		NA
923462	923463	M5005_Spy_1178	M5005_Spy_1179			TRUE	0.963	0.000	0.250	NA		NA
923463	923464	M5005_Spy_1179	M5005_Spy_1180			TRUE	0.985	15.000	0.833	NA		NA
923464	923465	M5005_Spy_1180	M5005_Spy_1181			TRUE	0.939	11.000	0.222	NA		NA
923465	923466	M5005_Spy_1181	M5005_Spy_1182			TRUE	0.968	12.000	0.444	NA		NA
923466	923467	M5005_Spy_1182	M5005_Spy_1183			TRUE	0.989	1.000	0.750	NA		NA
923467	923468	M5005_Spy_1183	M5005_Spy_1184			TRUE	0.983	-7.000	0.467	NA		NA
923468	923469	M5005_Spy_1184	M5005_Spy_1185			TRUE	0.988	-40.000	0.667	NA		NA
923469	923470	M5005_Spy_1185	M5005_Spy_1186			TRUE	0.687	10.000	0.000	NA		NA
923470	923471	M5005_Spy_1186	M5005_Spy_1187			TRUE	0.767	0.000	0.000	NA		NA
923471	923472	M5005_Spy_1187	M5005_Spy_1188			TRUE	0.940	25.000	0.417	NA		NA
923472	923473	M5005_Spy_1188	M5005_Spy_1189			TRUE	0.652	81.000	0.263	NA		NA
923473	923474	M5005_Spy_1189	M5005_Spy_1190			FALSE	0.146	110.000	0.000	NA		NA
923474	923475	M5005_Spy_1190	M5005_Spy_1191			FALSE	0.416	39.000	0.000	NA		NA
923475	923476	M5005_Spy_1191	M5005_Spy_1192			TRUE	0.784	-31.000	0.000	NA		NA
923476	923477	M5005_Spy_1192	M5005_Spy_1193			TRUE	0.794	-3.000	0.000	NA		NA
923477	923478	M5005_Spy_1193	M5005_Spy_1194			TRUE	0.978	-7.000	0.353	NA		NA
923478	923479	M5005_Spy_1194	M5005_Spy_1195			TRUE	0.794	-3.000	0.000	NA		NA
923479	923480	M5005_Spy_1195	M5005_Spy_1196			FALSE	0.109	149.000	0.000	NA		NA
923480	923481	M5005_Spy_1196	M5005_Spy_1197			FALSE	0.148	109.000	0.000	NA		NA
923481	923482	M5005_Spy_1197	M5005_Spy_1198			FALSE	0.030	268.000	0.000	NA		NA
923482	923483	M5005_Spy_1198	M5005_Spy_1199			TRUE	0.741	2.000	0.000	NA		NA
923483	923484	M5005_Spy_1199	M5005_Spy_1200			FALSE	0.180	84.000	0.000	NA		NA
923484	923485	M5005_Spy_1200	M5005_Spy_1201			TRUE	0.794	-3.000	0.000	NA		NA
923485	923486	M5005_Spy_1201	M5005_Spy_1202			FALSE	0.150	106.000	0.000	NA		NA
923486	923487	M5005_Spy_1202	M5005_Spy_1203			TRUE	0.687	10.000	0.000	NA		NA
923487	923488	M5005_Spy_1203	M5005_Spy_1204			TRUE	0.997	-3.000	0.667	0.062		NA
923488	923489	M5005_Spy_1204	M5005_Spy_1205			TRUE	0.730	3.000	0.000	NA		NA
923489	923490	M5005_Spy_1205	M5005_Spy_1206			FALSE	0.279	56.000	0.000	NA		NA
923490	923491	M5005_Spy_1206	M5005_Spy_1207			TRUE	0.694	9.000	0.000	NA		NA
923491	923492	M5005_Spy_1207	M5005_Spy_1208			TRUE	0.794	-3.000	0.000	NA		NA
923492	923493	M5005_Spy_1208	M5005_Spy_1209			TRUE	0.916	-19.000	0.018	NA		NA
923493	923494	M5005_Spy_1209	M5005_Spy_1210			FALSE	0.267	145.000	0.018	NA		NA
923494	923495	M5005_Spy_1210	M5005_Spy_1211			FALSE	0.155	100.000	0.000	NA		NA
923495	923496	M5005_Spy_1211	M5005_Spy_1212		xis	TRUE	0.741	2.000	0.000	NA		NA
923496	923497	M5005_Spy_1212	M5005_Spy_1213	xis		FALSE	0.199	78.000	0.000	NA		NA
923498	923499	M5005_Spy_1214	M5005_Spy_1215			FALSE	0.116	142.000	0.000	NA		NA
923500	923501	M5005_Spy_1216	M5005_Spy_1217			TRUE	0.476	32.000	0.000	NA		NA
923501	923502	M5005_Spy_1217	M5005_Spy_1218			TRUE	0.938	12.000	0.000	0.062		NA
923503	923504	M5005_Spy_1219	M5005_Spy_1220			TRUE	0.977	4.000	0.500	NA		NA
923504	923505	M5005_Spy_1220	M5005_Spy_1221			TRUE	0.683	12.000	0.000	NA		NA
923505	923506	M5005_Spy_1221	M5005_Spy_1222		int.2	FALSE	0.131	124.000	0.000	NA		NA
923507	923508	M5005_Spy_1223	M5005_Spy_1224			TRUE	0.487	99.000	0.156	NA		NA
923508	923509	M5005_Spy_1224	M5005_Spy_1225			TRUE	0.992	-22.000	0.828	NA		NA
923509	923510	M5005_Spy_1225	M5005_Spy_1226			TRUE	0.964	-7.000	0.203	NA		NA
923510	923511	M5005_Spy_1226	M5005_Spy_1227			FALSE	0.048	216.000	0.000	NA		NA
923511	923512	M5005_Spy_1227	M5005_Spy_1228		recN	FALSE	0.096	172.000	0.000	1.000		NA
923512	923513	M5005_Spy_1228	M5005_Spy_1229	recN	argR1	TRUE	0.818	22.000	0.037	1.000	N	NA
923513	923514	M5005_Spy_1229	M5005_Spy_1230	argR1		TRUE	0.929	-13.000	0.048	1.000	N	NA
923514	923515	M5005_Spy_1230	M5005_Spy_1231		fps	TRUE	0.933	-7.000	0.058	1.000	N	NA
923515	923516	M5005_Spy_1231	M5005_Spy_1232	fps	xseB	TRUE	0.930	0.000	0.100	1.000	N	NA
923516	923517	M5005_Spy_1232	M5005_Spy_1233	xseB		TRUE	0.999	-22.000	0.412	0.001	Y	NA
923517	923518	M5005_Spy_1233	M5005_Spy_1234		folD	FALSE	0.264	153.000	0.045	1.000	N	NA
923518	923519	M5005_Spy_1234	M5005_Spy_1235	folD		FALSE	0.127	208.000	0.013	1.000	N	NA
923519	923520	M5005_Spy_1235	M5005_Spy_1236		phr	FALSE	0.162	169.000	0.004	1.000	N	NA
923520	923521	M5005_Spy_1236	M5005_Spy_1237	phr	artP	FALSE	0.112	149.000	0.000	1.000	N	NA
923521	923522	M5005_Spy_1237	M5005_Spy_1238	artP	artQ	TRUE	0.995	0.000	0.640	1.000	Y	NA
923522	923523	M5005_Spy_1238	M5005_Spy_1239	artQ		FALSE	0.319	127.000	0.044	NA		NA
923524	923525	M5005_Spy_1240	M5005_Spy_1241	clpE	mutT	FALSE	0.357	128.000	0.079	1.000	N	NA
923525	923526	M5005_Spy_1241	M5005_Spy_1242	mutT		TRUE	0.648	51.000	0.114	NA		NA
923527	923528	M5005_Spy_1243	M5005_Spy_1244	ileS	divIVAS	FALSE	0.064	273.000	0.012	NA	N	NA
923528	923529	M5005_Spy_1244	M5005_Spy_1245	divIVAS		TRUE	0.978	10.000	0.579	NA		NA
923529	923530	M5005_Spy_1245	M5005_Spy_1246			TRUE	0.970	0.000	0.287	1.000		NA
923530	923531	M5005_Spy_1246	M5005_Spy_1247			TRUE	0.965	5.000	0.370	NA		NA
923531	923532	M5005_Spy_1247	M5005_Spy_1248			TRUE	0.953	0.000	0.194	NA		NA
923532	923533	M5005_Spy_1248	M5005_Spy_1249		ftsZ	TRUE	0.890	3.000	0.030	NA		NA
923533	923534	M5005_Spy_1249	M5005_Spy_1250	ftsZ	ftsA	TRUE	0.980	24.000	0.460	1.000	Y	NA
923534	923535	M5005_Spy_1250	M5005_Spy_1251	ftsA	divIB	FALSE	0.367	212.000	0.389	NA	N	NA
923535	923536	M5005_Spy_1251	M5005_Spy_1252	divIB	murG	TRUE	0.971	1.000	0.072	NA	Y	NA
923536	923537	M5005_Spy_1252	M5005_Spy_1253	murG	murD	TRUE	0.977	-21.000	0.060	1.000	Y	NA
923537	923538	M5005_Spy_1253	M5005_Spy_1254	murD		FALSE	0.037	370.000	0.006	NA		NA
923538	923539	M5005_Spy_1254	M5005_Spy_1255		typA	FALSE	0.293	122.000	0.015	NA		NA
923539	923540	M5005_Spy_1255	M5005_Spy_1256	typA		FALSE	0.117	183.000	0.003	NA	N	NA
923540	923541	M5005_Spy_1256	M5005_Spy_1257		glcK	TRUE	0.874	10.000	0.064	NA	N	NA
923541	923542	M5005_Spy_1257	M5005_Spy_1258	glcK		TRUE	0.974	5.000	0.496	NA		NA
923542	923543	M5005_Spy_1258	M5005_Spy_1259		dpr	FALSE	0.308	142.000	0.058	NA		NA
923545	923546	M5005_Spy_1261	M5005_Spy_1262			TRUE	0.876	4.000	0.016	NA		NA
923546	923547	M5005_Spy_1262	M5005_Spy_1263			FALSE	0.025	295.000	0.000	NA		NA
923547	923548	M5005_Spy_1263	M5005_Spy_1264			FALSE	0.455	34.000	0.000	NA		NA
923548	923549	M5005_Spy_1264	M5005_Spy_1265			FALSE	0.162	93.000	0.000	NA		NA
923549	923550	M5005_Spy_1265	M5005_Spy_1266			FALSE	0.022	366.000	0.000	1.000		NA
923550	923551	M5005_Spy_1266	M5005_Spy_1267			TRUE	0.930	-13.000	0.052	1.000	N	NA
923551	923552	M5005_Spy_1267	M5005_Spy_1268			TRUE	0.979	-10.000	0.367	1.000	N	NA
923552	923553	M5005_Spy_1268	M5005_Spy_1269		asnA	FALSE	0.260	123.000	0.006	1.000	N	NA
923553	923554	M5005_Spy_1269	M5005_Spy_1270	asnA	arcC	FALSE	0.107	313.000	0.000	1.000	Y	NA
923554	923555	M5005_Spy_1270	M5005_Spy_1271	arcC		TRUE	0.943	20.000	0.035	1.000	Y	NA
923555	923556	M5005_Spy_1271	M5005_Spy_1272			TRUE	0.902	17.000	0.140	1.000		NA
923556	923557	M5005_Spy_1272	M5005_Spy_1273		arcB	FALSE	0.284	170.000	0.104	1.000		NA
923557	923558	M5005_Spy_1273	M5005_Spy_1274	arcB		TRUE	0.756	40.000	0.104	1.000		NA
923558	923559	M5005_Spy_1274	M5005_Spy_1275		arcA	FALSE	0.408	100.000	0.056	1.000		NA
923559	923560	M5005_Spy_1275	M5005_Spy_1276	arcA		FALSE	0.030	274.000	0.000	1.000	N	NA
923562	923563	M5005_Spy_1278	M5005_Spy_1279			TRUE	0.831	14.000	0.009	NA		NA
923563	923564	M5005_Spy_1279	M5005_Spy_1280			FALSE	0.414	73.000	0.007	1.000		NA
923564	923565	M5005_Spy_1280	M5005_Spy_1281			TRUE	0.997	-3.000	0.480	0.011		NA
923565	923566	M5005_Spy_1281	M5005_Spy_1282		msrA	TRUE	0.633	88.000	0.240	1.000		NA
923566	923567	M5005_Spy_1282	M5005_Spy_1283	msrA	tlpA	TRUE	0.984	43.000	0.875	1.000	Y	NA
923567	923568	M5005_Spy_1283	M5005_Spy_1284	tlpA	ccdA	TRUE	0.989	13.000	0.500	1.000	Y	NA
923568	923569	M5005_Spy_1284	M5005_Spy_1285	ccdA		FALSE	0.012	603.000	0.000	1.000	N	NA
11400643	923560		M5005_Spy_1276			FALSE	NA	7877.000	0.000	NA		NA
11543006	923560		M5005_Spy_1276			FALSE	NA	7877.000	0.000	NA		NA
11685398	923560		M5005_Spy_1276			FALSE	NA	7877.000	0.000	NA		NA
11400644	923560		M5005_Spy_1276			FALSE	NA	7908.000	0.000	NA		NA
11543007	923560		M5005_Spy_1276			FALSE	NA	7908.000	0.000	NA		NA
11685399	923560		M5005_Spy_1276			FALSE	NA	7908.000	0.000	NA		NA
11400645	923560		M5005_Spy_1276			FALSE	NA	7942.000	0.000	NA		NA
11543008	923560		M5005_Spy_1276			FALSE	NA	7942.000	0.000	NA		NA
11685400	923560		M5005_Spy_1276			FALSE	NA	7942.000	0.000	NA		NA
11400646	923560		M5005_Spy_1276			FALSE	NA	7973.000	0.000	NA		NA
11543009	923560		M5005_Spy_1276			FALSE	NA	7973.000	0.000	NA		NA
11685401	923560		M5005_Spy_1276			FALSE	NA	7973.000	0.000	NA		NA
11400647	923560		M5005_Spy_1276			FALSE	NA	8008.000	0.000	NA		NA
11543010	923560		M5005_Spy_1276			FALSE	NA	8008.000	0.000	NA		NA
11685402	923560		M5005_Spy_1276			FALSE	NA	8008.000	0.000	NA		NA
11400648	923560		M5005_Spy_1276			FALSE	NA	8039.000	0.000	NA		NA
11543011	923560		M5005_Spy_1276			FALSE	NA	8039.000	0.000	NA		NA
11685403	923560		M5005_Spy_1276			FALSE	NA	8039.000	0.000	NA		NA
11400649	923560		M5005_Spy_1276			FALSE	NA	8073.000	0.000	NA		NA
11543012	923560		M5005_Spy_1276			FALSE	NA	8073.000	0.000	NA		NA
11685404	923560		M5005_Spy_1276			FALSE	NA	8073.000	0.000	NA		NA
11400650	923560		M5005_Spy_1276			FALSE	NA	8104.000	0.000	NA		NA
11543013	923560		M5005_Spy_1276			FALSE	NA	8104.000	0.000	NA		NA
11685405	923560		M5005_Spy_1276			FALSE	NA	8104.000	0.000	NA		NA
11400651	923560		M5005_Spy_1276			FALSE	NA	8140.000	0.000	NA		NA
11543014	923560		M5005_Spy_1276			FALSE	NA	8140.000	0.000	NA		NA
11685406	923560		M5005_Spy_1276			FALSE	NA	8140.000	0.000	NA		NA
923569	923570	M5005_Spy_1285	M5005_Spy_1286			TRUE	0.995	11.000	0.882	1.000	Y	NA
923570	923571	M5005_Spy_1286	M5005_Spy_1287			TRUE	0.996	-3.000	0.773	NA	Y	NA
923571	923572	M5005_Spy_1287	M5005_Spy_1288			TRUE	0.994	2.000	0.711	NA	Y	NA
923572	923573	M5005_Spy_1288	M5005_Spy_1289			TRUE	0.991	5.000	0.948	NA		NA
923573	923574	M5005_Spy_1289	M5005_Spy_1290			TRUE	0.992	0.000	0.891	NA		NA
923574	923575	M5005_Spy_1290	M5005_Spy_1291			TRUE	0.765	133.000	0.664	NA		NA
923575	923576	M5005_Spy_1291	M5005_Spy_1292		valS	FALSE	0.111	160.000	0.000	1.000		NA
923576	923577	M5005_Spy_1292	M5005_Spy_1293	valS		FALSE	0.085	244.000	0.008	NA		NA
923577	923578	M5005_Spy_1293	M5005_Spy_1294			TRUE	0.922	-3.000	0.033	NA		NA
923578	923579	M5005_Spy_1294	M5005_Spy_1295			FALSE	0.014	425.000	0.000	NA		NA
923579	923580	M5005_Spy_1295	M5005_Spy_1296			TRUE	0.632	18.000	0.000	NA		NA
923581	923582	M5005_Spy_T0049	M5005_Spy_1297			FALSE	0.038	242.000	0.000	NA		NA
923582	923583	M5005_Spy_1297	M5005_Spy_1298		aroB	TRUE	0.950	56.000	0.003	0.003	Y	NA
923584	923585	M5005_Spy_1299	M5005_Spy_1300			TRUE	0.699	8.000	0.000	NA		NA
923585	923586	M5005_Spy_1300	M5005_Spy_1301			TRUE	0.741	2.000	0.000	NA		NA
923586	923587	M5005_Spy_1301	M5005_Spy_1302			TRUE	0.554	53.000	0.026	NA		NA
923587	923588	M5005_Spy_1302	M5005_Spy_1303		aroE	FALSE	0.042	235.000	0.000	1.000	N	NA
923588	923589	M5005_Spy_1303	M5005_Spy_1304	aroE	lacZ	FALSE	0.323	138.000	0.061	1.000	N	NA
923589	923590	M5005_Spy_1304	M5005_Spy_1305	lacZ		TRUE	0.896	20.000	0.167	1.000	N	NA
923590	923591	M5005_Spy_1305	M5005_Spy_1306			TRUE	0.996	0.000	0.167	0.011	Y	NA
923591	923592	M5005_Spy_1306	M5005_Spy_1307			TRUE	0.990	-10.000	0.667	NA		NA
923592	923593	M5005_Spy_1307	M5005_Spy_1308			FALSE	0.023	306.000	0.000	NA		NA
923593	923594	M5005_Spy_1308	M5005_Spy_1309			TRUE	0.959	81.000	0.333	0.032	Y	NA
923594	923595	M5005_Spy_1309	M5005_Spy_1310			TRUE	0.999	10.000	0.917	0.032	Y	NA
923596	923597	M5005_Spy_1311	M5005_Spy_1312			FALSE	0.114	144.000	0.000	NA		NA
923598	923599	M5005_Spy_1313	M5005_Spy_1314		hyl	TRUE	0.893	24.000	0.182	1.000		NA
923599	923600	M5005_Spy_1314	M5005_Spy_1315	hyl		TRUE	0.809	51.000	0.286	1.000		NA
923601	923602	M5005_Spy_1316	M5005_Spy_1317			TRUE	0.930	15.000	0.194	1.000		NA
923603	923604	M5005_Spy_1318	M5005_Spy_1319	rocA		FALSE	0.009	665.000	0.000	NA	N	NA
923605	923606	M5005_Spy_1320	M5005_Spy_1321	recX		FALSE	0.412	80.000	0.025	NA		NA
923609	923610	M5005_Spy_T0050	M5005_Spy_T0051			TRUE	0.577	23.000	0.000	NA		NA
923610	923611	M5005_Spy_T0051	M5005_Spy_T0052			FALSE	0.433	36.000	0.000	NA		NA
923611	923612	M5005_Spy_T0052	M5005_Spy_T0053			TRUE	0.685	11.000	0.000	NA		NA
923612	923613	M5005_Spy_T0053	M5005_Spy_T0054			TRUE	0.705	6.000	0.000	NA		NA
923613	923614	M5005_Spy_T0054	M5005_Spy_T0055			TRUE	0.476	32.000	0.000	NA		NA
923614	923615	M5005_Spy_T0055	M5005_Spy_T0056			TRUE	0.632	18.000	0.000	NA		NA
923615	923616	M5005_Spy_T0056	M5005_Spy_R0013			TRUE	0.577	23.000	0.000	NA		NA
923616	923617	M5005_Spy_R0013	M5005_Spy_R0014			FALSE	0.163	92.000	0.000	NA		NA
923617	923618	M5005_Spy_R0014	M5005_Spy_T0057			FALSE	0.024	298.000	0.000	NA		NA
923618	923619	M5005_Spy_T0057	M5005_Spy_R0015			FALSE	0.317	50.000	0.000	NA		NA
923621	923622	M5005_Spy_1325	M5005_Spy_1326		comFC	TRUE	0.471	80.000	0.080	NA		NA
923622	923623	M5005_Spy_1326	M5005_Spy_1327	comFC	comFA	TRUE	0.942	-28.000	0.130	NA		NA
923624	923625	M5005_Spy_1328	M5005_Spy_1329		cysM	FALSE	0.337	128.000	0.033	1.000		NA
923626	923627	M5005_Spy_1330	M5005_Spy_1331			TRUE	0.948	0.000	0.151	1.000		NA
923627	923628	M5005_Spy_1331	M5005_Spy_1332		yvqC	TRUE	0.813	37.000	0.164	1.000		NA
923628	923629	M5005_Spy_1332	M5005_Spy_1333	yvqC	yvqE	TRUE	0.999	-7.000	0.853	0.011	Y	NA
923629	923630	M5005_Spy_1333	M5005_Spy_1334	yvqE	yvqF	TRUE	0.990	-3.000	0.679	NA		NA
923630	923631	M5005_Spy_1334	M5005_Spy_1335	yvqF		FALSE	0.321	123.000	0.039	NA		NA
923631	923632	M5005_Spy_1335	M5005_Spy_1336		pppL	TRUE	0.996	-3.000	0.704	1.000	Y	NA
923632	923633	M5005_Spy_1336	M5005_Spy_1337	pppL	sunL	TRUE	0.731	38.000	0.074	1.000	N	NA
923633	923634	M5005_Spy_1337	M5005_Spy_1338	sunL		TRUE	0.991	-10.000	0.305	1.000	Y	NA
923634	923635	M5005_Spy_1338	M5005_Spy_1339		priA	TRUE	0.529	62.000	0.052	1.000	N	NA
923635	923636	M5005_Spy_1339	M5005_Spy_1340	priA		TRUE	0.792	65.000	0.032	0.059	N	NA
923636	923637	M5005_Spy_1340	M5005_Spy_1341		gmk	TRUE	0.965	16.000	0.471	1.000	N	NA
923637	923638	M5005_Spy_1341	M5005_Spy_1342	gmk		FALSE	0.325	110.000	0.010	1.000		NA
923638	923639	M5005_Spy_1342	M5005_Spy_1343			FALSE	0.272	130.000	0.006	1.000		NA
923640	923641	M5005_Spy_1344	M5005_Spy_1345	atoB	atoD.1	TRUE	0.951	24.000	0.150	1.000	Y	NA
923641	923642	M5005_Spy_1345	M5005_Spy_1346	atoD.1	atoA	TRUE	0.997	2.000	0.200	0.002	Y	NA
923642	923643	M5005_Spy_1346	M5005_Spy_1347	atoA		TRUE	0.975	33.000	0.111	0.040	Y	NA
923643	923644	M5005_Spy_1347	M5005_Spy_1348			TRUE	0.743	71.000	0.333	1.000	N	NA
923644	923645	M5005_Spy_1348	M5005_Spy_1349		luxS	TRUE	0.900	-16.000	0.006	1.000	N	NA
923646	923647	M5005_Spy_1350	M5005_Spy_1351			TRUE	0.858	14.000	0.029	NA		NA
923647	923648	M5005_Spy_1351	M5005_Spy_1352			FALSE	0.014	445.000	0.000	NA		NA
923648	923649	M5005_Spy_1352	M5005_Spy_1353			TRUE	0.755	122.000	0.579	NA		NA
923650	923651	M5005_Spy_1354	M5005_Spy_1355	recU	pbp1A	TRUE	0.977	-13.000	0.319	1.000		NA
923652	923653	M5005_Spy_1356	M5005_Spy_1357	pepC		FALSE	0.167	185.000	0.017	1.000	N	NA
923653	923654	M5005_Spy_1357	M5005_Spy_1358		nadE	TRUE	0.997	2.000	0.194	0.002	Y	NA
923654	923655	M5005_Spy_1358	M5005_Spy_1359	nadE		FALSE	0.211	171.000	0.032	1.000	N	NA
923655	923656	M5005_Spy_1359	M5005_Spy_1360			FALSE	0.219	169.000	0.033	1.000	N	NA
923656	923657	M5005_Spy_1360	M5005_Spy_1361		aapA	TRUE	0.576	64.000	0.117	NA		NA
923657	923658	M5005_Spy_1361	M5005_Spy_1362	aapA		TRUE	0.665	104.000	0.364	NA		NA
923658	923659	M5005_Spy_1362	M5005_Spy_1363			TRUE	0.990	-3.000	0.310	1.000	Y	NA
923659	923660	M5005_Spy_1363	M5005_Spy_1364			FALSE	0.154	195.000	0.018	1.000	N	NA
923660	923661	M5005_Spy_1364	M5005_Spy_1365			FALSE	0.196	158.000	0.007	1.000	N	NA
923661	923662	M5005_Spy_1365	M5005_Spy_1366			TRUE	0.968	2.000	0.038	1.000	Y	NA
923662	923663	M5005_Spy_1366	M5005_Spy_1367		ftsL	TRUE	0.973	4.000	0.456	1.000	N	NA
923663	923664	M5005_Spy_1367	M5005_Spy_1368	ftsL	mraW	TRUE	0.902	5.000	0.077	1.000	N	NA
923664	923665	M5005_Spy_1368	M5005_Spy_1369	mraW		TRUE	0.564	24.000	0.000	NA		NA
923665	923666	M5005_Spy_1369	M5005_Spy_1370		proA	FALSE	0.019	343.000	0.000	NA		NA
923666	923667	M5005_Spy_1370	M5005_Spy_1371	proA		TRUE	0.998	-7.000	0.281	0.002	Y	NA
923667	923668	M5005_Spy_1371	M5005_Spy_1372		proB	FALSE	0.410	65.000	0.006	NA		NA
923668	923669	M5005_Spy_1372	M5005_Spy_1373	proB		TRUE	0.963	5.000	0.341	NA		NA
923669	923670	M5005_Spy_1373	M5005_Spy_1374			TRUE	0.791	34.000	0.136	NA		NA
923670	923671	M5005_Spy_1374	M5005_Spy_1375		tkt	FALSE	0.373	193.000	0.300	NA		NA
923671	923672	M5005_Spy_1375	M5005_Spy_1376	tkt		FALSE	0.210	218.000	0.000	1.000	Y	NA
923672	923673	M5005_Spy_1376	M5005_Spy_1377			FALSE	0.130	126.000	0.000	NA		NA
923673	923674	M5005_Spy_1377	M5005_Spy_1378			TRUE	0.983	-10.000	0.462	NA		NA
923674	923675	M5005_Spy_1378	M5005_Spy_1379		glpF	TRUE	0.677	109.000	0.364	1.000		NA
923675	923676	M5005_Spy_1379	M5005_Spy_1380	glpF	glpO	TRUE	0.979	2.000	0.500	1.000	N	NA
923676	923677	M5005_Spy_1380	M5005_Spy_1381	glpO	glpK	TRUE	0.998	16.000	0.500	0.002	Y	NA
923677	923678	M5005_Spy_1381	M5005_Spy_1382	glpK		FALSE	0.022	361.000	0.000	1.000		NA
923678	923679	M5005_Spy_1382	M5005_Spy_1383			FALSE	0.308	127.000	0.029	NA		NA
923679	923680	M5005_Spy_1383	M5005_Spy_1384		glyS	FALSE	0.241	154.000	0.020	NA		NA
923680	923681	M5005_Spy_1384	M5005_Spy_1385	glyS	glyQ	TRUE	0.862	378.000	0.651	0.001	Y	NA
923681	923682	M5005_Spy_1385	M5005_Spy_1386	glyQ		FALSE	0.021	372.000	0.000	1.000		NA
923682	923683	M5005_Spy_1386	M5005_Spy_1387			FALSE	0.372	132.000	0.074	1.000		NA
923683	923684	M5005_Spy_1387	M5005_Spy_1388		nagA	FALSE	0.354	122.000	0.045	1.000		NA
923684	923685	M5005_Spy_1388	M5005_Spy_1389	nagA		FALSE	0.382	118.000	0.090	1.000	N	NA
923689	923690	M5005_Spy_1393	M5005_Spy_1394			TRUE	0.901	2.000	0.047	NA		NA
923690	923691	M5005_Spy_1394	M5005_Spy_1395		lacD.1	FALSE	0.149	197.000	0.019	NA		NA
923691	923692	M5005_Spy_1395	M5005_Spy_1396	lacD.1		TRUE	0.664	150.000	0.000	0.002		NA
923692	923693	M5005_Spy_1396	M5005_Spy_1397		lacB.1	TRUE	0.732	10.000	0.000	1.000		NA
923693	923694	M5005_Spy_1397	M5005_Spy_1398	lacB.1	lacA.1	TRUE	0.998	15.000	0.500	0.002	Y	NA
923694	923695	M5005_Spy_1398	M5005_Spy_1399	lacA.1		FALSE	0.181	240.000	0.000	1.000	Y	NA
923695	923696	M5005_Spy_1399	M5005_Spy_1400			TRUE	0.965	29.000	0.000	0.017	Y	NA
923696	923697	M5005_Spy_1400	M5005_Spy_1401			TRUE	0.998	-7.000	0.429	0.013	Y	NA
923699	923700	M5005_Spy_1403	M5005_Spy_1404		copZ	TRUE	0.960	7.000	0.333	NA		NA
923700	923701	M5005_Spy_1404	M5005_Spy_1405	copZ	copA	TRUE	0.993	14.000	0.048	0.002	Y	NA
923701	923702	M5005_Spy_1405	M5005_Spy_1406	copA	copY	TRUE	0.921	0.000	0.064	1.000	N	NA
923704	923705	M5005_Spy_1408	M5005_Spy_1409	rbfA	infB	TRUE	0.734	199.000	0.530	1.000	Y	NA
923705	923706	M5005_Spy_1409	M5005_Spy_1410	infB		TRUE	0.967	20.000	0.223	NA	Y	NA
923706	923707	M5005_Spy_1410	M5005_Spy_1411			TRUE	0.979	-7.000	0.408	NA	N	NA
923707	923708	M5005_Spy_1411	M5005_Spy_1412		nusA	TRUE	0.979	16.000	0.323	NA	Y	NA
923708	923709	M5005_Spy_1412	M5005_Spy_1413	nusA		TRUE	0.708	175.000	0.759	NA		NA
923709	923710	M5005_Spy_1413	M5005_Spy_1414			FALSE	0.037	245.000	0.000	NA		NA
923712	923713	M5005_Spy_1416	M5005_Spy_1417			FALSE	0.145	111.000	0.000	NA		NA
923713	923714	M5005_Spy_1417	M5005_Spy_1418			TRUE	0.989	-3.000	0.667	NA		NA
923714	923715	M5005_Spy_1418	M5005_Spy_1419			TRUE	0.685	11.000	0.000	NA		NA
923715	923716	M5005_Spy_1419	M5005_Spy_1420			TRUE	0.730	3.000	0.000	NA		NA
923716	923717	M5005_Spy_1420	M5005_Spy_1421			TRUE	0.694	9.000	0.000	NA		NA
923717	923718	M5005_Spy_1421	M5005_Spy_1422			TRUE	0.685	11.000	0.000	NA		NA
923718	923719	M5005_Spy_1422	M5005_Spy_1423			TRUE	0.767	0.000	0.000	NA		NA
923719	923720	M5005_Spy_1423	M5005_Spy_1424			TRUE	0.794	-3.000	0.000	NA		NA
923720	923721	M5005_Spy_1424	M5005_Spy_1425			TRUE	0.687	10.000	0.000	NA		NA
923721	923722	M5005_Spy_1425	M5005_Spy_1426			TRUE	0.963	12.000	0.400	NA		NA
923722	923723	M5005_Spy_1426	M5005_Spy_1427			TRUE	0.959	15.000	0.400	NA		NA
923723	923724	M5005_Spy_1427	M5005_Spy_1428			TRUE	0.654	75.000	0.235	NA		NA
923724	923725	M5005_Spy_1428	M5005_Spy_1429			TRUE	0.584	54.000	0.062	NA		NA
923725	923726	M5005_Spy_1429	M5005_Spy_1430			TRUE	0.871	12.000	0.041	NA		NA
923726	923727	M5005_Spy_1430	M5005_Spy_1431			TRUE	0.988	4.000	0.800	NA		NA
923727	923728	M5005_Spy_1431	M5005_Spy_1432			TRUE	0.982	15.000	0.750	NA		NA
923728	923729	M5005_Spy_1432	M5005_Spy_1433			TRUE	0.981	11.000	0.667	NA		NA
923729	923730	M5005_Spy_1433	M5005_Spy_1434			TRUE	0.972	12.000	0.500	NA		NA
923730	923731	M5005_Spy_1434	M5005_Spy_1435			TRUE	0.928	13.000	0.192	NA		NA
923731	923732	M5005_Spy_1435	M5005_Spy_1436			FALSE	0.095	156.000	0.000	NA		NA
923732	923733	M5005_Spy_1436	M5005_Spy_1437			TRUE	0.730	3.000	0.000	NA		NA
923733	923734	M5005_Spy_1437	M5005_Spy_1438			TRUE	0.836	31.000	0.167	NA		NA
923734	923735	M5005_Spy_1438	M5005_Spy_1439			TRUE	0.966	-34.000	0.250	NA		NA
923735	923736	M5005_Spy_1439	M5005_Spy_1440			TRUE	0.960	16.000	0.429	NA		NA
923736	923737	M5005_Spy_1440	M5005_Spy_1441			TRUE	0.994	-10.000	0.176	0.002		NA
923737	923738	M5005_Spy_1441	M5005_Spy_1442			TRUE	0.763	48.000	0.176	1.000		NA
923738	923739	M5005_Spy_1442	M5005_Spy_1443			TRUE	0.794	-3.000	0.000	NA		NA
923739	923740	M5005_Spy_1443	M5005_Spy_1444			TRUE	0.802	-10.000	0.000	NA		NA
923740	923741	M5005_Spy_1444	M5005_Spy_1445			TRUE	0.694	9.000	0.000	NA		NA
923741	923742	M5005_Spy_1445	M5005_Spy_1446			TRUE	0.794	-3.000	0.000	NA		NA
923742	923743	M5005_Spy_1446	M5005_Spy_1447			TRUE	0.980	1.000	0.500	NA		NA
923743	923744	M5005_Spy_1447	M5005_Spy_1448			TRUE	0.971	-3.000	0.286	NA		NA
923744	923745	M5005_Spy_1448	M5005_Spy_1449			FALSE	0.016	387.000	0.000	NA		NA
923745	923746	M5005_Spy_1449	M5005_Spy_1450			TRUE	0.911	5.000	0.111	NA		NA
923746	923747	M5005_Spy_1450	M5005_Spy_1451			TRUE	0.830	43.000	0.250	NA		NA
923747	923748	M5005_Spy_1451	M5005_Spy_1452			TRUE	0.685	11.000	0.000	NA		NA
923748	923749	M5005_Spy_1452	M5005_Spy_1453			TRUE	0.720	4.000	0.000	NA		NA
923749	923750	M5005_Spy_1453	M5005_Spy_1454			TRUE	0.939	0.000	0.143	NA		NA
923750	923751	M5005_Spy_1454	M5005_Spy_1455			TRUE	0.902	88.000	1.000	NA		NA
923751	923752	M5005_Spy_1455	M5005_Spy_1456			TRUE	0.794	-3.000	0.000	NA		NA
923752	923753	M5005_Spy_1456	M5005_Spy_1457			TRUE	0.794	-3.000	0.000	NA		NA
923753	923754	M5005_Spy_1457	M5005_Spy_1458			TRUE	0.989	-3.000	0.667	NA		NA
923754	923755	M5005_Spy_1458	M5005_Spy_1459			TRUE	0.995	-7.000	1.000	NA		NA
923755	923756	M5005_Spy_1459	M5005_Spy_1460			TRUE	0.794	-3.000	0.000	NA		NA
923756	923757	M5005_Spy_1460	M5005_Spy_1461			FALSE	0.253	62.000	0.000	NA		NA
923760	923761	M5005_Spy_1464	M5005_Spy_1465			TRUE	0.989	14.000	1.000	NA		NA
923761	923762	M5005_Spy_1465	M5005_Spy_1466			TRUE	0.685	11.000	0.000	NA		NA
923762	923763	M5005_Spy_1466	M5005_Spy_1467		int.3	FALSE	0.138	117.000	0.000	NA		NA
923764	923765	M5005_Spy_T0058	M5005_Spy_1468			FALSE	0.237	65.000	0.000	NA		NA
923765	923766	M5005_Spy_1468	M5005_Spy_1469			TRUE	0.943	0.000	0.154	NA		NA
923766	923767	M5005_Spy_1469	M5005_Spy_1470			TRUE	0.542	64.000	0.107	NA	N	NA
923767	923768	M5005_Spy_1470	M5005_Spy_1471			TRUE	0.930	3.000	0.167	NA	N	NA
923769	923770	M5005_Spy_1472	M5005_Spy_1473	hit		TRUE	0.931	-3.000	0.063	NA		NA
923771	923772	M5005_Spy_1474	M5005_Spy_1475	lytR		TRUE	0.947	9.000	0.283	NA	N	NA
923772	923773	M5005_Spy_1475	M5005_Spy_1476			TRUE	0.919	-25.000	0.033	NA		NA
923773	923774	M5005_Spy_1476	M5005_Spy_1477			FALSE	0.206	154.000	0.008	NA		NA
923775	923776	M5005_Spy_1478	M5005_Spy_1479		manL	FALSE	0.023	352.000	0.000	1.000		NA
923776	923777	M5005_Spy_1479	M5005_Spy_1480	manL	manM	TRUE	0.989	89.000	0.943	0.016	Y	NA
923777	923778	M5005_Spy_1480	M5005_Spy_1481	manM	manN	TRUE	0.998	17.000	0.812	0.016	Y	NA
923778	923779	M5005_Spy_1481	M5005_Spy_1482	manN	manO	TRUE	0.773	114.000	0.583	NA		NA
923779	923780	M5005_Spy_1482	M5005_Spy_1483	manO	serS	FALSE	0.031	392.000	0.003	NA		NA
923781	923782	M5005_Spy_1484	M5005_Spy_1485	accD	accA	TRUE	0.998	-3.000	0.234	0.002	Y	NA
923782	923783	M5005_Spy_1485	M5005_Spy_1486	accA	accC	TRUE	0.994	9.000	0.090	0.002	Y	NA
923783	923784	M5005_Spy_1486	M5005_Spy_1487	accC	fabZ	TRUE	0.907	32.000	0.045	1.000	Y	NA
923784	923785	M5005_Spy_1487	M5005_Spy_1488	fabZ	accB	TRUE	0.996	-3.000	0.047	0.006	Y	NA
923785	923786	M5005_Spy_1488	M5005_Spy_1489	accB	fabF	TRUE	0.972	2.000	0.074	1.000	Y	NA
923786	923787	M5005_Spy_1489	M5005_Spy_1490	fabF		TRUE	0.956	15.000	0.056	1.000	Y	NA
923787	923788	M5005_Spy_1490	M5005_Spy_1491		fabD	TRUE	0.999	-10.000	0.432	0.006	Y	NA
923788	923789	M5005_Spy_1491	M5005_Spy_1492	fabD	fabK	TRUE	0.844	25.000	0.099	1.000		NA
923789	923790	M5005_Spy_1492	M5005_Spy_1493	fabK	acpP	FALSE	0.307	202.000	0.216	1.000		NA
923790	923791	M5005_Spy_1493	M5005_Spy_1494	acpP	fabH	TRUE	0.900	61.000	0.065	0.006		NA
923791	923792	M5005_Spy_1494	M5005_Spy_1495	fabH		TRUE	0.917	1.000	0.070	1.000	N	NA
923792	923793	M5005_Spy_1495	M5005_Spy_1496		phaB	TRUE	0.502	77.000	0.098	1.000	N	NA
923793	923794	M5005_Spy_1496	M5005_Spy_1497	phaB	dnaJ	FALSE	0.047	220.000	0.000	1.000	N	NA
923794	923795	M5005_Spy_1497	M5005_Spy_1498	dnaJ	dnaK	TRUE	0.741	281.000	0.196	0.003	Y	NA
923795	923796	M5005_Spy_1498	M5005_Spy_1499	dnaK	grpE	TRUE	0.805	181.000	0.026	0.006	Y	NA
923796	923797	M5005_Spy_1499	M5005_Spy_1500	grpE	hrcA	TRUE	0.682	42.000	0.051	1.000	N	NA
923797	923798	M5005_Spy_1500	M5005_Spy_1501	hrcA		FALSE	0.255	135.000	0.009	1.000	N	NA
923798	923799	M5005_Spy_1501	M5005_Spy_1502			TRUE	0.956	-3.000	0.174	1.000	N	NA
923799	923800	M5005_Spy_1502	M5005_Spy_1503			TRUE	0.958	-10.000	0.174	1.000	N	NA
923800	923801	M5005_Spy_1503	M5005_Spy_1504			FALSE	0.019	391.000	0.000	1.000		NA
923801	923802	M5005_Spy_1504	M5005_Spy_1505			FALSE	0.051	210.000	0.000	NA		NA
923802	923803	M5005_Spy_1505	M5005_Spy_1506		gatB	TRUE	0.794	-3.000	0.000	NA		NA
923803	923804	M5005_Spy_1506	M5005_Spy_1507	gatB	gatA	TRUE	0.999	0.000	0.492	0.002	Y	NA
923804	923805	M5005_Spy_1507	M5005_Spy_1508	gatA	gatC	TRUE	0.999	0.000	0.643	0.002	Y	NA
923805	923806	M5005_Spy_1508	M5005_Spy_1509	gatC		FALSE	0.091	232.000	0.002	1.000		NA
923806	923807	M5005_Spy_1509	M5005_Spy_1510			TRUE	0.986	-28.000	0.000	0.001		NA
923807	923808	M5005_Spy_1510	M5005_Spy_1511			FALSE	0.014	574.000	0.000	1.000		NA
923808	923809	M5005_Spy_1511	M5005_Spy_1512		codY	FALSE	0.327	147.000	0.083	1.000	N	NA
923809	923810	M5005_Spy_1512	M5005_Spy_1513	codY		FALSE	0.120	218.000	0.015	1.000	N	NA
923814	923815	M5005_Spy_1517	M5005_Spy_1518			TRUE	0.679	13.000	0.000	NA		NA
923815	923816	M5005_Spy_1518	M5005_Spy_1519		recG	FALSE	0.027	293.000	0.000	1.000	N	NA
923818	923819	M5005_Spy_1521	M5005_Spy_1522			TRUE	0.980	-63.000	0.429	1.000		NA
923819	923820	M5005_Spy_1522	M5005_Spy_1523			TRUE	0.986	-3.000	0.562	NA		NA
923820	923821	M5005_Spy_1523	M5005_Spy_1524			TRUE	0.936	-3.000	0.081	NA		NA
923821	923822	M5005_Spy_1524	M5005_Spy_1525			TRUE	0.998	-7.000	0.576	0.006	N	NA
923822	923823	M5005_Spy_1525	M5005_Spy_1526		fhuC	TRUE	0.926	-3.000	0.047	1.000	N	NA
923823	923824	M5005_Spy_1526	M5005_Spy_1527	fhuC		TRUE	0.996	-3.000	0.657	1.000	Y	NA
923824	923825	M5005_Spy_1527	M5005_Spy_1528			TRUE	0.996	2.000	0.877	1.000	Y	NA
923825	923826	M5005_Spy_1528	M5005_Spy_1529		shp	TRUE	0.958	-16.000	0.182	NA		NA
923826	923827	M5005_Spy_1529	M5005_Spy_1530	shp		FALSE	0.337	197.000	0.273	NA		NA
923827	923828	M5005_Spy_1530	M5005_Spy_1531		isp2	FALSE	0.013	489.000	0.000	NA		NA
923828	923829	M5005_Spy_1531	M5005_Spy_1532	isp2	acpS	FALSE	0.378	87.000	0.022	NA		NA
923829	923830	M5005_Spy_1532	M5005_Spy_1533	acpS	alr	TRUE	0.939	-3.000	0.093	1.000	N	NA
923830	923831	M5005_Spy_1533	M5005_Spy_1534	alr	secA	FALSE	0.282	116.000	0.008	1.000	N	NA
923831	923832	M5005_Spy_1534	M5005_Spy_1535	secA		FALSE	0.199	78.000	0.000	NA		NA
923832	923833	M5005_Spy_1535	M5005_Spy_1536			TRUE	0.796	-16.000	0.000	NA		NA
923833	923834	M5005_Spy_1536	M5005_Spy_1537			TRUE	0.976	-97.000	0.000	0.012		NA
923834	923835	M5005_Spy_1537	M5005_Spy_1538		pmi	FALSE	0.091	162.000	0.000	1.000	N	NA
923835	923836	M5005_Spy_1538	M5005_Spy_1539	pmi	scrK	TRUE	0.843	95.000	0.333	1.000	Y	NA
923836	923837	M5005_Spy_1539	M5005_Spy_1540	scrK	endoS	FALSE	0.075	192.000	0.000	1.000		NA
923837	923838	M5005_Spy_1540	M5005_Spy_1541	endoS		TRUE	0.564	24.000	0.000	NA		NA
923838	923839	M5005_Spy_1541	M5005_Spy_1542		scrA	FALSE	0.385	43.000	0.000	NA		NA
923840	923841	M5005_Spy_1543	M5005_Spy_1544	scrB	scrR	TRUE	0.980	5.000	0.571	1.000	N	NA
923842	923843	M5005_Spy_1545	M5005_Spy_1546	nusB		TRUE	0.971	-7.000	0.265	NA		NA
923843	923844	M5005_Spy_1546	M5005_Spy_1547		efp	TRUE	0.632	46.000	0.031	NA		NA
923844	923845	M5005_Spy_1547	M5005_Spy_1548	efp	comEB	FALSE	0.293	96.000	0.005	1.000	N	NA
923845	923846	M5005_Spy_1548	M5005_Spy_1549	comEB		TRUE	0.698	35.000	0.018	1.000	N	NA
923846	923847	M5005_Spy_1549	M5005_Spy_1550		uvrA	FALSE	0.284	115.000	0.008	1.000	N	NA
923848	923849	M5005_Spy_1551	M5005_Spy_1552	corA		FALSE	0.341	133.000	0.072	NA		NA
923850	923851	M5005_Spy_1553	M5005_Spy_1554	rpsR	ssb3	FALSE	0.198	165.000	0.012	1.000	N	NA
923851	923852	M5005_Spy_1554	M5005_Spy_1555	ssb3	rpsF	TRUE	0.787	22.000	0.012	1.000	N	NA
923852	923853	M5005_Spy_1555	M5005_Spy_1556	rpsF		FALSE	0.078	173.000	0.000	NA		NA
923854	923855	M5005_Spy_1557	M5005_Spy_1558	mutY		FALSE	0.341	76.000	0.002	1.000	N	NA
923856	923857	M5005_Spy_1559	M5005_Spy_1560	trx		TRUE	0.460	81.000	0.053	1.000		NA
923857	923858	M5005_Spy_1560	M5005_Spy_1561		mutS2	TRUE	0.884	1.000	0.005	1.000		NA
923858	923859	M5005_Spy_1561	M5005_Spy_1562	mutS2		FALSE	0.333	149.000	0.070	1.000		NA
923859	923860	M5005_Spy_1562	M5005_Spy_1563			TRUE	0.885	3.000	0.019	NA		NA
923861	923862	M5005_Spy_1564	M5005_Spy_1565		spi	TRUE	0.892	11.000	0.080	1.000	N	NA
923862	923863	M5005_Spy_1565	M5005_Spy_1566	spi	recD	TRUE	0.598	58.000	0.099	1.000	N	NA
923863	923864	M5005_Spy_1566	M5005_Spy_1567	recD		FALSE	0.390	91.000	0.050	NA		NA
923867	923868	M5005_Spy_1570	M5005_Spy_1571			TRUE	0.975	-15.000	0.326	NA		NA
923870	923871	M5005_Spy_1573	M5005_Spy_1574	glpF.2		FALSE	0.081	170.000	0.000	NA		NA
923871	923872	M5005_Spy_1574	M5005_Spy_1575		norA	FALSE	0.065	186.000	0.000	NA		NA
923873	923874	M5005_Spy_1576	M5005_Spy_1577	srv	pepXP	TRUE	0.858	22.000	0.081	1.000		NA
923876	923877	M5005_Spy_1579	M5005_Spy_1580			FALSE	0.114	193.000	0.002	NA		NA
923878	923879	M5005_Spy_1581	M5005_Spy_1582		dnaQ	FALSE	0.391	149.000	0.156	1.000	N	NA
923879	923880	M5005_Spy_1582	M5005_Spy_1583	dnaQ		TRUE	0.624	49.000	0.057	NA		NA
923882	923883	M5005_Spy_1585	M5005_Spy_1586	deoC	nupC	TRUE	0.965	30.000	0.333	1.000	Y	NA
923883	923884	M5005_Spy_1586	M5005_Spy_1587	nupC	udp	TRUE	0.935	21.000	0.015	1.000	Y	NA
923884	923885	M5005_Spy_1587	M5005_Spy_1588	udp		FALSE	0.237	65.000	0.000	NA		NA
923886	923887	M5005_Spy_1589	M5005_Spy_1590	crgR	rpsN2	FALSE	0.041	236.000	0.000	1.000	N	NA
923888	923889	M5005_Spy_1591	M5005_Spy_1592			TRUE	0.932	-10.000	0.030	1.000		NA
923889	923890	M5005_Spy_1592	M5005_Spy_1593			TRUE	0.964	-28.000	0.209	1.000		NA
923891	923892	M5005_Spy_1594	M5005_Spy_1595			TRUE	0.983	2.000	0.576	NA		NA
923893	923894	M5005_Spy_1596	M5005_Spy_1597	glnA		TRUE	0.809	38.000	0.179	1.000	N	NA
923894	923895	M5005_Spy_1597	M5005_Spy_1598			TRUE	0.599	67.000	0.154	NA		NA
923895	923896	M5005_Spy_1598	M5005_Spy_1599		pgk	FALSE	0.059	263.000	0.002	NA		NA
923896	923897	M5005_Spy_1599	M5005_Spy_1600	pgk	lppC	FALSE	0.133	193.000	0.003	1.000		NA
923897	923898	M5005_Spy_1600	M5005_Spy_1601	lppC		FALSE	0.051	230.000	0.000	1.000		NA
923898	923899	M5005_Spy_1601	M5005_Spy_1602			FALSE	0.097	237.000	0.006	1.000		NA
923899	923900	M5005_Spy_1602	M5005_Spy_1603		asp	TRUE	0.984	0.000	0.567	NA		NA
923900	923901	M5005_Spy_1603	M5005_Spy_1604	asp		TRUE	0.547	25.000	0.000	NA		NA
923901	923902	M5005_Spy_1604	M5005_Spy_1605			TRUE	0.711	5.000	0.000	NA		NA
923902	923903	M5005_Spy_1605	M5005_Spy_1606		rpmB	FALSE	0.074	178.000	0.000	1.000	N	NA
923903	923904	M5005_Spy_1606	M5005_Spy_1607	rpmB	fba	FALSE	0.017	382.000	0.000	1.000	N	NA
923904	923905	M5005_Spy_1607	M5005_Spy_T0059	fba		FALSE	0.053	207.000	0.000	NA		NA
923905	923906	M5005_Spy_T0059	M5005_Spy_1608			FALSE	0.290	54.000	0.000	NA		NA
923906	923907	M5005_Spy_1608	M5005_Spy_1609			FALSE	0.172	168.000	0.002	1.000		NA
923907	923908	M5005_Spy_1609	M5005_Spy_1610		pyrG	TRUE	0.991	-3.000	0.011	0.001		NA
923908	923909	M5005_Spy_1610	M5005_Spy_1611	pyrG	rpoE	FALSE	0.101	257.000	0.029	1.000		NA
923909	923910	M5005_Spy_1611	M5005_Spy_1612	rpoE	ropA	FALSE	0.100	217.000	0.005	1.000	N	NA
923912	923913	M5005_Spy_1614	M5005_Spy_1615			TRUE	0.907	14.000	0.149	NA		NA
923913	923914	M5005_Spy_1615	M5005_Spy_1616		thiD	TRUE	0.971	-10.000	0.276	NA		NA
923914	923915	M5005_Spy_1616	M5005_Spy_1617	thiD		TRUE	0.933	-10.000	0.058	1.000	N	NA
923915	923916	M5005_Spy_1617	M5005_Spy_1618		comX.2	FALSE	0.081	185.000	0.000	1.000		NA
923916	923917	M5005_Spy_1618	M5005_Spy_T0060	comX.2		TRUE	0.534	26.000	0.000	NA		NA
923917	923918	M5005_Spy_T0060	M5005_Spy_T0061			FALSE	0.193	80.000	0.000	NA		NA
923918	923919	M5005_Spy_T0061	M5005_Spy_R0016			TRUE	0.685	11.000	0.000	NA		NA
923919	923920	M5005_Spy_R0016	M5005_Spy_R0017			FALSE	0.163	92.000	0.000	NA		NA
923920	923921	M5005_Spy_R0017	M5005_Spy_T0062			FALSE	0.024	298.000	0.000	NA		NA
923921	923922	M5005_Spy_T0062	M5005_Spy_R0018			FALSE	0.317	50.000	0.000	NA		NA
923925	923926	M5005_Spy_1621	M5005_Spy_1622	hsdR	hsdS	TRUE	0.990	13.000	0.000	0.001	Y	NA
923926	923927	M5005_Spy_1622	M5005_Spy_1623	hsdS	hsdM	TRUE	0.976	13.000	0.000	0.056	Y	NA
923928	923929	M5005_Spy_1624	M5005_Spy_1625		salR	FALSE	0.102	152.000	0.000	NA		NA
923929	923930	M5005_Spy_1625	M5005_Spy_1626	salR		TRUE	0.996	-19.000	0.704	NA	Y	NA
923930	923931	M5005_Spy_1626	M5005_Spy_1627		salY	FALSE	0.408	40.000	0.000	NA		NA
923931	923932	M5005_Spy_1627	M5005_Spy_1628	salY		TRUE	0.780	2.000	0.000	1.000		NA
923932	923933	M5005_Spy_1628	M5005_Spy_1629		salX	TRUE	0.975	-3.000	0.000	0.020		NA
923933	923934	M5005_Spy_1629	M5005_Spy_1630	salX	salB	FALSE	0.206	74.000	0.000	NA		NA
923934	923935	M5005_Spy_1630	M5005_Spy_1631	salB	salA	FALSE	0.182	83.000	0.000	NA		NA
923935	923936	M5005_Spy_1631	M5005_Spy_1632	salA	lacG	FALSE	0.015	512.000	0.000	1.000		NA
923936	923937	M5005_Spy_1632	M5005_Spy_1633	lacG	lacE	TRUE	0.530	88.000	0.000	1.000	Y	NA
923937	923938	M5005_Spy_1633	M5005_Spy_1634	lacE	lacF	TRUE	0.996	0.000	0.150	0.013	Y	NA
923938	923939	M5005_Spy_1634	M5005_Spy_1635	lacF	lacD.2	TRUE	0.988	24.000	0.667	1.000	Y	NA
923939	923940	M5005_Spy_1635	M5005_Spy_1636	lacD.2	lacC.2	TRUE	0.990	4.000	0.000	0.002	Y	NA
923940	923941	M5005_Spy_1636	M5005_Spy_1637	lacC.2	lacB.2	TRUE	0.738	48.000	0.000	1.000	Y	NA
923941	923942	M5005_Spy_1637	M5005_Spy_1638	lacB.2	lacA.2	TRUE	0.970	35.000	0.000	0.002	Y	NA
923943	923944	M5005_Spy_1639	M5005_Spy_1640	lacR.2		FALSE	0.011	661.000	0.000	NA		NA
923944	923945	M5005_Spy_1640	M5005_Spy_1641			TRUE	0.802	-10.000	0.000	NA		NA
923945	923946	M5005_Spy_1641	M5005_Spy_1642			FALSE	0.102	152.000	0.000	NA		NA
923948	923949	M5005_Spy_1643	M5005_Spy_1645			FALSE	0.129	334.000	0.000	0.056		NA
923950	923951	M5005_Spy_1646	M5005_Spy_1647	rpsI	rplM	TRUE	0.997	21.000	0.601	0.022	Y	NA
923951	923952	M5005_Spy_1647	M5005_Spy_1648	rplM		FALSE	0.048	218.000	0.000	1.000	N	NA
923952	923953	M5005_Spy_1648	M5005_Spy_1649			TRUE	0.926	-3.000	0.051	NA		NA
923953	923954	M5005_Spy_1649	M5005_Spy_1650			FALSE	0.122	136.000	0.000	NA		NA
923954	923955	M5005_Spy_1650	M5005_Spy_1651			FALSE	0.366	97.000	0.036	NA		NA
923955	923956	M5005_Spy_1651	M5005_Spy_1652			TRUE	0.914	4.000	0.109	NA		NA
923956	923957	M5005_Spy_1652	M5005_Spy_1653			TRUE	0.525	47.000	0.003	NA		NA
923957	923958	M5005_Spy_1653	M5005_Spy_1654			FALSE	0.059	196.000	0.000	NA		NA
923958	923959	M5005_Spy_1654	M5005_Spy_1655		cysS	TRUE	0.952	-7.000	0.129	1.000		NA
923959	923960	M5005_Spy_1655	M5005_Spy_1656	cysS		TRUE	0.675	28.000	0.002	NA		NA
923960	923961	M5005_Spy_1656	M5005_Spy_1657			TRUE	0.679	13.000	0.000	NA		NA
923961	923962	M5005_Spy_1657	M5005_Spy_1658		cysE	FALSE	0.060	194.000	0.000	NA		NA
923962	923963	M5005_Spy_1658	M5005_Spy_1659	cysE		TRUE	0.900	9.000	0.097	NA		NA
923963	923964	M5005_Spy_1659	M5005_Spy_1660			TRUE	0.908	-7.000	0.009	NA		NA
923964	923965	M5005_Spy_1660	M5005_Spy_1661			FALSE	0.028	281.000	0.000	1.000	N	NA
923965	923966	M5005_Spy_1661	M5005_Spy_1662			FALSE	0.283	156.000	0.056	1.000		NA
923966	923967	M5005_Spy_1662	M5005_Spy_1663			TRUE	0.976	27.000	0.241	0.019		NA
923967	923968	M5005_Spy_1663	M5005_Spy_1664			TRUE	0.988	-7.000	0.048	0.012	N	NA
923968	923969	M5005_Spy_1664	M5005_Spy_1665			FALSE	0.176	225.000	0.143	NA		NA
923969	923970	M5005_Spy_1665	M5005_Spy_1666			TRUE	0.885	-16.000	0.002	NA		NA
923970	923971	M5005_Spy_1666	M5005_Spy_1667			FALSE	0.093	158.000	0.000	NA		NA
923972	923973	M5005_Spy_1668	M5005_Spy_1669		def	FALSE	0.154	101.000	0.000	NA		NA
923974	923975	M5005_Spy_1670	M5005_Spy_1671			TRUE	0.670	131.000	0.414	1.000		NA
923975	923976	M5005_Spy_1671	M5005_Spy_1672		polC	FALSE	0.334	110.000	0.020	1.000	N	NA
923976	923977	M5005_Spy_1672	M5005_Spy_1673	polC	proS	FALSE	0.338	255.000	0.070	0.043	N	NA
923977	923978	M5005_Spy_1673	M5005_Spy_1674	proS		FALSE	0.194	198.000	0.095	1.000	N	NA
923978	923979	M5005_Spy_1674	M5005_Spy_1675		cdsA	FALSE	0.457	73.000	0.040	1.000	N	NA
923979	923980	M5005_Spy_1675	M5005_Spy_1676	cdsA	uppS	TRUE	0.965	13.000	0.113	1.000	Y	NA
923980	923981	M5005_Spy_1676	M5005_Spy_1677	uppS	yajC	FALSE	0.090	219.000	0.007	NA	N	NA
923981	923982	M5005_Spy_1677	M5005_Spy_1678	yajC		FALSE	0.239	116.000	0.006	NA	N	NA
923982	923983	M5005_Spy_1678	M5005_Spy_1679			FALSE	0.096	142.000	0.000	NA	N	NA
923983	923984	M5005_Spy_1679	M5005_Spy_1680		pulA	TRUE	0.994	-37.000	0.160	0.001		NA
923984	923985	M5005_Spy_1680	M5005_Spy_1681	pulA	dexB	TRUE	0.625	171.000	0.049	0.020		NA
923985	923986	M5005_Spy_1681	M5005_Spy_1682	dexB	msmK	TRUE	0.707	129.000	0.171	1.000	Y	NA
923986	923987	M5005_Spy_1682	M5005_Spy_1683	msmK	lrp	FALSE	0.083	298.000	0.071	1.000	N	NA
923989	923990	M5005_Spy_1685	M5005_Spy_1686		relA	TRUE	0.917	15.000	0.177	1.000	N	NA
923990	923991	M5005_Spy_1686	M5005_Spy_1687	relA	sclA	FALSE	0.042	252.000	0.000	1.000		NA
923995	923996	M5005_Spy_1691	M5005_Spy_1692			TRUE	0.837	83.000	0.610	1.000		NA
923996	923997	M5005_Spy_1692	M5005_Spy_1693			TRUE	0.990	-3.000	0.119	0.012		NA
923997	923998	M5005_Spy_1693	M5005_Spy_1694			FALSE	0.018	358.000	0.000	NA		NA
923998	923999	M5005_Spy_1694	M5005_Spy_1695			TRUE	0.960	0.000	0.227	NA		NA
923999	924000	M5005_Spy_1695	M5005_Spy_1696			FALSE	0.424	71.000	0.013	NA		NA
924001	924002	M5005_Spy_1697	M5005_Spy_1698		trpG	TRUE	0.885	33.000	0.009	1.000	Y	NA
924002	924003	M5005_Spy_1698	M5005_Spy_1699	trpG		TRUE	0.731	33.000	0.035	1.000	N	NA
924003	924004	M5005_Spy_1699	M5005_Spy_T0063			FALSE	0.027	286.000	0.000	NA		NA
924004	924005	M5005_Spy_T0063	M5005_Spy_1700			FALSE	0.120	139.000	0.000	NA		NA
924005	924006	M5005_Spy_1700	M5005_Spy_1701		flaR	TRUE	0.607	55.000	0.062	1.000		NA
924006	924007	M5005_Spy_1701	M5005_Spy_1702	flaR	smeZ	FALSE	0.044	249.000	0.000	1.000		NA
924009	924010	M5005_Spy_1704	M5005_Spy_1705	dppA	dppB	TRUE	0.802	113.000	0.000	0.030	Y	NA
924010	924011	M5005_Spy_1705	M5005_Spy_1706	dppB	dppC	TRUE	0.999	-3.000	1.000	0.030	Y	NA
924011	924012	M5005_Spy_1706	M5005_Spy_1707	dppC	dppD	TRUE	0.984	12.000	0.333	1.000	Y	NA
924012	924013	M5005_Spy_1707	M5005_Spy_1708	dppD	dppE	TRUE	0.999	-16.000	0.750	0.020	Y	NA
924014	924015	M5005_Spy_1709	M5005_Spy_1710			FALSE	0.083	169.000	0.000	NA		NA
924015	924016	M5005_Spy_1710	M5005_Spy_1711		lmb	TRUE	0.679	13.000	0.000	NA		NA
924016	924017	M5005_Spy_1711	M5005_Spy_1712	lmb		FALSE	0.074	178.000	0.000	1.000	N	NA
924017	924018	M5005_Spy_1712	M5005_Spy_1713			FALSE	0.290	54.000	0.000	NA		NA
924018	924019	M5005_Spy_1713	M5005_Spy_1714			FALSE	0.374	45.000	0.000	NA		NA
924019	924020	M5005_Spy_1714	M5005_Spy_1715		scpA	TRUE	0.569	97.000	0.000	0.061		NA
924021	924022	M5005_Spy_1716	M5005_Spy_1717			TRUE	0.791	-21.000	0.000	NA		NA
924023	924024	M5005_Spy_1718	M5005_Spy_1719	sic1.01	emm1.0	FALSE	0.063	189.000	0.000	NA		NA
924024	924025	M5005_Spy_1719	M5005_Spy_1720	emm1.0	mga	FALSE	0.066	185.000	0.000	NA		NA
924027	924028	M5005_Spy_1722	M5005_Spy_1723		isp	TRUE	0.916	79.000	1.000	NA		NA
924028	924029	M5005_Spy_1723	M5005_Spy_1724	isp	ihk	TRUE	0.560	102.000	0.200	1.000		NA
924029	924030	M5005_Spy_1724	M5005_Spy_1725	ihk	irr	TRUE	0.994	-3.000	0.500	1.000	Y	NA
924030	924031	M5005_Spy_1725	M5005_Spy_1726	irr		TRUE	0.615	94.000	0.267	1.000	N	NA
924031	924032	M5005_Spy_1726	M5005_Spy_1727			TRUE	0.988	13.000	0.467	1.000	Y	NA
924032	924033	M5005_Spy_1727	M5005_Spy_1728			TRUE	0.977	-13.000	0.385	NA	N	NA
924033	924034	M5005_Spy_1728	M5005_Spy_1729			FALSE	0.127	423.000	0.333	NA		NA
924034	924035	M5005_Spy_1729	M5005_Spy_1730			TRUE	0.523	27.000	0.000	NA		NA
924037	924038	M5005_Spy_1732	M5005_Spy_1733			FALSE	0.279	56.000	0.000	NA		NA
924038	924039	M5005_Spy_1733	M5005_Spy_1734			FALSE	0.149	107.000	0.000	NA		NA
924039	924040	M5005_Spy_1734	M5005_Spy_1735		speB	TRUE	0.982	2.000	0.000	0.001		NA
924041	924042	M5005_Spy_1736	M5005_Spy_1737		rgg	FALSE	0.027	284.000	0.000	NA		NA
924044	924045	M5005_Spy_1739	M5005_Spy_1740			FALSE	0.102	152.000	0.000	NA		NA
924046	924047	M5005_Spy_1741	M5005_Spy_1742	gldA	mipB	TRUE	0.721	57.000	0.211	1.000	N	NA
924047	924048	M5005_Spy_1742	M5005_Spy_1743	mipB	pflD	TRUE	0.960	13.000	0.368	1.000	N	NA
924048	924049	M5005_Spy_1743	M5005_Spy_1744	pflD		FALSE	0.133	255.000	0.132	1.000	N	NA
924049	924050	M5005_Spy_1744	M5005_Spy_1745			TRUE	0.999	10.000	0.889	0.012	Y	NA
924050	924051	M5005_Spy_1745	M5005_Spy_1746			TRUE	0.998	28.000	0.889	0.012	Y	NA
924051	924052	M5005_Spy_1746	M5005_Spy_1747			FALSE	0.096	288.000	0.091	1.000	N	NA
924052	924053	M5005_Spy_1747	M5005_Spy_1748			TRUE	0.970	16.000	0.188	1.000	Y	NA
924054	924055	M5005_Spy_1749	M5005_Spy_1750			FALSE	0.445	35.000	0.000	NA		NA
924056	924057	M5005_Spy_1751	M5005_Spy_1752	secE		TRUE	0.885	14.000	0.080	1.000	N	NA
924057	924058	M5005_Spy_1752	M5005_Spy_1753		pbp2A	TRUE	0.675	49.000	0.111	1.000	N	NA
924058	924059	M5005_Spy_1753	M5005_Spy_1754	pbp2A		TRUE	0.689	39.000	0.062	NA	N	NA
924060	924061	M5005_Spy_1755	M5005_Spy_1756			TRUE	0.920	-106.000	0.056	NA		NA
924064	924065	M5005_Spy_1759	M5005_Spy_1760			TRUE	0.791	-21.000	0.000	NA		NA
924065	924066	M5005_Spy_1760	M5005_Spy_1761		groEL	FALSE	0.015	393.000	0.000	NA		NA
924066	924067	M5005_Spy_1761	M5005_Spy_1762	groEL	groES	TRUE	0.984	36.000	0.160	0.006	Y	NA
924067	924068	M5005_Spy_1762	M5005_Spy_1763	groES	clpC	FALSE	0.451	178.000	0.036	1.000	Y	NA
924068	924069	M5005_Spy_1763	M5005_Spy_1764	clpC	ctsR	TRUE	0.948	0.000	0.188	NA	N	NA
924069	924070	M5005_Spy_1764	M5005_Spy_1765	ctsR	csp	FALSE	0.350	196.000	0.013	NA	Y	NA
924070	924071	M5005_Spy_1765	M5005_Spy_1766	csp		FALSE	0.121	137.000	0.000	NA		NA
924071	924072	M5005_Spy_1766	M5005_Spy_1767			TRUE	0.796	-16.000	0.000	NA		NA
924072	924073	M5005_Spy_1767	M5005_Spy_T0064			FALSE	0.013	481.000	0.000	NA		NA
924074	924075	M5005_Spy_1768	M5005_Spy_1769	ahpC	ahpF	TRUE	0.986	21.000	0.551	1.000	Y	NA
924077	924078	M5005_Spy_1771	M5005_Spy_1772	hutU		TRUE	0.716	89.000	0.086	1.000	Y	NA
924078	924079	M5005_Spy_1772	M5005_Spy_1773			TRUE	0.969	11.000	0.143	1.000	Y	NA
924079	924080	M5005_Spy_1773	M5005_Spy_1774		fhs.2	TRUE	0.844	18.000	0.038	1.000	N	NA
924080	924081	M5005_Spy_1774	M5005_Spy_1775	fhs.2		TRUE	0.816	22.000	0.038	NA		NA
924081	924082	M5005_Spy_1775	M5005_Spy_1776			FALSE	0.141	220.000	0.062	NA		NA
924082	924083	M5005_Spy_1776	M5005_Spy_1777		hutH	TRUE	0.948	11.000	0.006	1.000	Y	NA
924083	924084	M5005_Spy_1777	M5005_Spy_1778	hutH	hutG	TRUE	0.734	186.000	0.000	0.002	Y	NA
924086	924087	M5005_Spy_1780	M5005_Spy_1781	rpsB		TRUE	0.910	134.000	0.748	1.000	Y	NA
924088	924089	M5005_Spy_1782	M5005_Spy_1783	pepO	dexS	FALSE	0.053	208.000	0.000	1.000	N	NA
924089	924090	M5005_Spy_1783	M5005_Spy_1784	dexS		TRUE	0.945	67.000	0.650	1.000	Y	NA
924093	924094	M5005_Spy_1787	M5005_Spy_1788		yaaA	TRUE	0.598	42.000	0.007	NA		NA
924095	924096	M5005_Spy_1789	M5005_Spy_1790	nrdG		TRUE	0.950	0.000	0.159	1.000		NA
924096	924097	M5005_Spy_1790	M5005_Spy_1791			TRUE	0.889	9.000	0.041	1.000		NA
924097	924098	M5005_Spy_1791	M5005_Spy_1792			TRUE	0.761	29.000	0.041	NA		NA
924098	924099	M5005_Spy_1792	M5005_Spy_1793		nrdD	FALSE	0.203	182.000	0.062	NA		NA
924099	924100	M5005_Spy_1793	M5005_Spy_1794	nrdD		FALSE	0.385	97.000	0.057	NA		NA
924100	924101	M5005_Spy_1794	M5005_Spy_1795			FALSE	0.014	413.000	0.000	NA		NA
924101	924102	M5005_Spy_1795	M5005_Spy_1796			TRUE	0.980	12.000	0.651	NA		NA
924102	924103	M5005_Spy_1796	M5005_Spy_1797			TRUE	0.986	-3.000	0.537	NA		NA
924103	924104	M5005_Spy_1797	M5005_Spy_1798			FALSE	0.338	113.000	0.032	NA		NA
924104	924105	M5005_Spy_1798	M5005_Spy_1799		recA	FALSE	0.055	291.000	0.004	1.000	N	NA
924105	924106	M5005_Spy_1799	M5005_Spy_1800	recA	cinA	TRUE	0.463	89.000	0.083	1.000		NA
924106	924107	M5005_Spy_1800	M5005_Spy_1801	cinA	tag	FALSE	0.451	69.000	0.011	1.000		NA
924107	924108	M5005_Spy_1801	M5005_Spy_1802	tag	ruvA	TRUE	0.953	10.000	0.012	1.000	Y	NA
924108	924109	M5005_Spy_1802	M5005_Spy_1803	ruvA	lmrP	TRUE	0.879	2.000	0.005	1.000		NA
924109	924110	M5005_Spy_1803	M5005_Spy_1804	lmrP	mutL	TRUE	0.849	11.000	0.006	1.000		NA
924110	924111	M5005_Spy_1804	M5005_Spy_1805	mutL	mutS	TRUE	0.947	129.000	0.220	0.002	Y	NA
924111	924112	M5005_Spy_1805	M5005_Spy_1806	mutS		TRUE	0.923	-13.000	0.031	NA		NA
924112	924113	M5005_Spy_1806	M5005_Spy_1807		argR2	FALSE	0.300	143.000	0.054	NA		NA
924114	924115	M5005_Spy_1808	M5005_Spy_1809	argS	uviB	FALSE	0.385	88.000	0.032	NA		NA
924116	924117	M5005_Spy_1810	M5005_Spy_1811			TRUE	0.938	43.000	0.667	NA		NA
924117	924118	M5005_Spy_1811	M5005_Spy_1812			TRUE	0.949	-37.000	0.156	NA		NA
924118	924119	M5005_Spy_1812	M5005_Spy_1813		aspS	TRUE	0.919	-7.000	0.016	NA		NA
924119	924120	M5005_Spy_1813	M5005_Spy_1814	aspS	hisS	TRUE	0.515	338.000	0.161	0.042	Y	NA
924121	924122	M5005_Spy_1815	M5005_Spy_1816	rpmF	rpmG	TRUE	0.986	16.000	0.012	0.029	Y	NA
924122	924123	M5005_Spy_1816	M5005_Spy_1817	rpmG	cadD	FALSE	0.021	293.000	0.000	NA	N	NA
924123	924124	M5005_Spy_1817	M5005_Spy_1818	cadD	cadC	TRUE	0.993	-18.000	0.875	NA	N	NA
924124	924125	M5005_Spy_1818	M5005_Spy_1819	cadC		TRUE	0.903	51.000	0.571	1.000		NA
924125	924126	M5005_Spy_1819	M5005_Spy_1820			TRUE	0.801	66.000	0.400	1.000		NA
924126	924127	M5005_Spy_1820	M5005_Spy_1821			TRUE	0.994	-3.000	1.000	NA		NA
924131	924132	M5005_Spy_1825	M5005_Spy_1826			TRUE	0.973	-13.000	0.300	NA		NA
924132	924133	M5005_Spy_1826	M5005_Spy_1827			TRUE	0.977	-3.000	0.350	NA		NA
924134	924135	M5005_Spy_1828	M5005_Spy_1829			TRUE	0.835	33.000	0.182	NA		NA
924137	924138	M5005_Spy_1831	M5005_Spy_1832	rpsD		FALSE	0.054	203.000	0.000	NA		NA
924138	924139	M5005_Spy_1832	M5005_Spy_1833			TRUE	0.796	-16.000	0.000	NA		NA
924139	924140	M5005_Spy_1833	M5005_Spy_1834			FALSE	0.011	632.000	0.000	NA		NA
924140	924141	M5005_Spy_1834	M5005_Spy_1835		holB	TRUE	0.843	17.000	0.030	NA		NA
924141	924142	M5005_Spy_1835	M5005_Spy_1836	holB	rplI	TRUE	0.799	30.000	0.100	1.000	N	NA
924142	924143	M5005_Spy_1836	M5005_Spy_1837	rplI		TRUE	0.944	-3.000	0.119	1.000	N	NA
924143	924144	M5005_Spy_1837	M5005_Spy_1838		gidA	FALSE	0.336	91.000	0.011	1.000	N	NA
924144	924145	M5005_Spy_1838	M5005_Spy_1839	gidA		FALSE	0.277	124.000	0.005	1.000		NA
924145	924146	M5005_Spy_1839	M5005_Spy_1840		trmU	FALSE	0.024	777.000	0.003	1.000		NA
924147	924148	M5005_Spy_1841	M5005_Spy_1842	sdhB	sdhA	TRUE	0.997	12.000	0.221	0.001	Y	NA
924149	924150	M5005_Spy_1843	M5005_Spy_1844		cbiQ	FALSE	0.021	372.000	0.000	1.000		NA
924150	924151	M5005_Spy_1844	M5005_Spy_1845	cbiQ	cbiO2	TRUE	0.983	-7.000	0.136	1.000	Y	NA
924151	924152	M5005_Spy_1845	M5005_Spy_1846	cbiO2	cbiO1	TRUE	0.999	-24.000	0.713	0.019	Y	NA
924152	924153	M5005_Spy_1846	M5005_Spy_1847	cbiO1		TRUE	0.908	-49.000	0.015	1.000	N	NA
924153	924154	M5005_Spy_1847	M5005_Spy_1848			TRUE	0.894	14.000	0.077	1.000		NA
924154	924155	M5005_Spy_1848	M5005_Spy_1849			TRUE	0.724	50.000	0.156	1.000		NA
924155	924156	M5005_Spy_1849	M5005_Spy_1850			TRUE	0.998	2.000	0.872	0.004		NA
924157	924158	M5005_Spy_1851	M5005_Spy_1852	hasA	hasB	TRUE	0.892	36.000	0.048	1.000	Y	NA
924158	924159	M5005_Spy_1852	M5005_Spy_1853	hasB	hasC	FALSE	0.286	182.000	0.000	1.000	Y	NA
924159	924160	M5005_Spy_1853	M5005_Spy_1854	hasC		FALSE	0.027	308.000	0.000	1.000		NA
924160	924161	M5005_Spy_1854	M5005_Spy_1855		recF	TRUE	0.955	2.000	0.209	1.000		NA
924162	924163	M5005_Spy_1856	M5005_Spy_1857		guaB	FALSE	0.042	232.000	0.000	1.000	N	NA
924163	924164	M5005_Spy_1857	M5005_Spy_1858	guaB	trsA	FALSE	0.044	308.000	0.002	1.000	N	NA
924164	924165	M5005_Spy_1858	M5005_Spy_1859	trsA		FALSE	0.276	92.000	0.002	NA		NA
924166	924167	M5005_Spy_1860	M5005_Spy_1861			FALSE	0.421	79.000	0.027	NA		NA
924167	924168	M5005_Spy_1861	M5005_Spy_1862			FALSE	0.410	83.000	0.040	NA		NA
924169	924170	M5005_Spy_T0065	M5005_Spy_T0066			FALSE	0.455	34.000	0.000	NA		NA
924170	924171	M5005_Spy_T0066	M5005_Spy_1863			FALSE	0.013	491.000	0.000	NA		NA
924174	924175	M5005_Spy_1865	M5005_Spy_1866	htrA	parB	TRUE	0.494	59.000	0.015	1.000	N	NA
924175	922226	M5005_Spy_1866	M5005_Spy_0001	parB	dnaA	FALSE	0.079	233.000	0.002	1.000	N	NA