MicrobesOnline Operon Predictions for Leptospira interrogans, 56601

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 289455 289456 LA_0001 LA_0002 dnaA dnaN FALSE 0.113 1656.000 0.328 1.000 Y NA
 289456 289457 LA_0002 LA_0003 dnaN recF FALSE 0.111 662.000 0.318 1.000 Y NA
 289457 289458 LA_0003 LA_0004 recF   TRUE 0.988 -3.000 0.089 NA   NA
 289458 289459 LA_0004 LA_0005   gyrB TRUE 0.882 64.000 0.028 NA   NA
 289459 289460 LA_0005 LA_0006 gyrB gyrA TRUE 0.997 19.000 0.306 0.002 Y NA
 289460 289461 LA_0006 LA_0007 gyrA   TRUE 0.984 5.000 0.003 1.000 N NA
 289461 289462 LA_0007 LA_0008     FALSE 0.066 151.000 0.000 NA   NA
 289462 289463 LA_0008 LA_0009     FALSE 0.018 242.000 0.000 NA   NA
 289464 289465 LA_0010 LA_0011   lipL21 FALSE 0.005 510.000 0.000 NA   NA
 289466 289467 LA_0012 LA_0013     TRUE 0.979 22.000 0.667 NA   NA
 289472 289473 LA_0018 LA_0019     FALSE 0.074 145.000 0.000 NA   NA
 289473 289474 LA_0019 LA_0020   fabG TRUE 0.987 5.000 0.667 NA   NA
 289474 289475 LA_0020 LA_0021 fabG sua5 TRUE 0.980 16.000 0.006 NA N NA
 289475 289476 LA_0021 LA_0022 sua5   FALSE 0.005 491.000 0.000 NA   NA
 289480 289481 LA_0025 LA_0027 fliG cyaA1 TRUE 0.895 65.000 0.005 1.000 N NA
 289481 289483 LA_0027 LA_0029 cyaA1   FALSE 0.007 623.000 0.000 1.000   NA
 289483 289484 LA_0029 LA_0030     TRUE 0.848 -22.000 0.000 NA   NA
 289484 289485 LA_0030 LA_0031     FALSE 0.022 225.000 0.000 NA   NA
 289485 289486 LA_0031 LA_0032     TRUE 0.986 4.000 0.048 NA   NA
 289487 289488 LA_0033 LA_0034 suhB   TRUE 0.965 20.000 0.005 NA   NA
 289488 289489 LA_0034 LA_0035   lacA FALSE 0.004 610.000 0.000 NA   NA
 289491 289492 LA_0036 LA_0038     TRUE 0.872 8.000 0.000 NA   NA
 289492 289493 LA_0038 LA_0039     TRUE 0.896 -3.000 0.000 NA   NA
 289493 289494 LA_0039 LA_0040   vacB TRUE 0.984 6.000 0.003 1.000 N NA
 289494 289495 LA_0040 LA_0041 vacB   FALSE 0.047 172.000 0.000 NA   NA
 289495 289496 LA_0041 LA_0042     TRUE 0.986 4.000 0.045 NA   NA
 289496 289497 LA_0042 LA_0043     FALSE 0.132 142.000 0.000 1.000   NA
 289499 289500 LA_0045 LA_0046 aroD gutQ TRUE 0.991 4.000 0.035 1.000 N NA
 289500 289501 LA_0046 LA_0047 gutQ nusG TRUE 0.989 -16.000 0.035 1.000 N NA
 289501 289502 LA_0047 LA_0048 nusG   TRUE 0.981 -16.000 1.000 NA   NA
 289503 289504 LA_0049 LA_0050 aer   FALSE 0.007 606.000 0.000 1.000   NA
 289504 289505 LA_0050 LA_0051   wcaG TRUE 0.992 -3.000 0.333 1.000   NA
 289505 289506 LA_0051 LA_0052 wcaG pntA TRUE 0.878 74.000 0.010 1.000 N NA
 289507 289508 LA_0053 LA_0054   hisS TRUE 0.984 -3.000 0.004 1.000   NA
 289508 289509 LA_0054 LA_0055 hisS   TRUE 0.980 7.000 0.004 1.000   NA
 289509 289510 LA_0055 LA_0056     TRUE 0.924 10.000 0.000 1.000   NA
 289513 289514 LA_0059 LA_0060     FALSE 0.086 220.000 0.000 0.036   NA
 289517 289518 LA_0063 LA_0064     TRUE 0.966 -36.000 0.005 NA   NA
 289519 289520 LA_0065 LA_0066 dinF gltP FALSE 0.383 188.000 0.006 0.088 N NA
 289521 289522 LA_0067 LA_0068     TRUE 0.987 -7.000 1.000 1.000   NA
 289522 289524 LA_0068 LA_0070     FALSE 0.006 1114.000 0.000 1.000   NA
 289525 289526 LA_0071 LA_0072   dcd TRUE 0.774 76.000 0.007 NA   NA
 289526 289527 LA_0072 LA_0073 dcd caiD TRUE 0.989 1.000 0.007 1.000 N NA
 289528 289529 LA_0074 LA_0075     FALSE 0.003 905.000 0.000 NA   NA
 289530 289531 LA_0076 LA_0077     FALSE 0.558 110.000 0.014 NA   NA
 289531 289532 LA_0077 LA_0078     TRUE 0.989 -3.000 0.375 NA   NA
 289538 289539 LA_0084 LA_0085     TRUE 0.965 39.000 0.176 NA   NA
 289541 289544 LA_0087 LA_0089     FALSE 0.004 692.000 0.000 NA   NA
 289544 289545 LA_0089 LA_0091     FALSE 0.100 128.000 0.000 NA   NA
 289546 289547 LA_0092 LA_0093     FALSE 0.037 192.000 0.000 NA   NA
 289547 289548 LA_0093 LA_0094     FALSE 0.007 371.000 0.000 NA   NA
 289548 399250 LA_0094 LA_t01   tRNA-Arg-ACG FALSE 0.004 634.000 0.000 NA   NA
 399250 289549 LA_t01 LA_0095 tRNA-Arg-ACG   TRUE 0.879 6.000 0.000 NA   NA
 289549 289550 LA_0095 LA_0097     TRUE 0.976 -46.000 1.000 NA   NA
 289550 399249 LA_0097 LA_t02   tRNA-Ser-GCT FALSE 0.696 43.000 0.000 NA   NA
 399249 399248 LA_t02 LA_t03 tRNA-Ser-GCT tRNA-Ser-TGA TRUE 0.862 14.000 0.000 NA   NA
 289552 289553 LA_0098 LA_0099 trmA   FALSE 0.009 335.000 0.000 NA   NA
 289553 289554 LA_0099 LA_0100     FALSE 0.003 900.000 0.000 NA   NA
 289554 289555 LA_0100 LA_0101     FALSE 0.015 256.000 0.000 NA   NA
 289555 289556 LA_0101 LA_0102     TRUE 0.966 38.000 0.600 NA   NA
 289556 289557 LA_0102 LA_0103     TRUE 0.986 9.000 0.400 NA   NA
 289557 289558 LA_0103 LA_0104     TRUE 0.989 -3.000 0.500 NA   NA
 289559 289560 LA_0105 LA_0106   faa1 FALSE 0.121 119.000 0.000 NA   NA
 289560 289561 LA_0106 LA_0107 faa1   FALSE 0.304 179.000 0.667 NA   NA
 289561 289562 LA_0107 LA_0108   aat TRUE 0.966 -27.000 0.004 NA   NA
 289562 289563 LA_0108 LA_0109 aat ligT TRUE 0.830 50.000 0.000 1.000 N NA
 289563 289564 LA_0109 LA_0110 ligT   TRUE 0.842 48.000 0.000 1.000 N NA
 289566 289567 LA_0112 LA_0113   metC FALSE 0.008 338.000 0.000 NA   NA
 289567 289568 LA_0113 LA_0114 metC prfA TRUE 0.897 60.000 0.002 1.000 N NA
 289569 289570 LA_0115 LA_0116     FALSE 0.185 101.000 0.000 NA   NA
 289571 289572 LA_0117 LA_0119     TRUE 0.986 12.000 0.028 1.000   NA
 289572 289574 LA_0119 LA_0120   glpG FALSE 0.010 467.000 0.000 1.000   NA
 289574 289575 LA_0120 LA_0121 glpG   FALSE 0.009 323.000 0.000 NA   NA
 289578 289579 LA_0124 LA_0125 hisB hisH TRUE 0.998 -3.000 0.125 0.004 Y NA
 289579 289580 LA_0125 LA_0126 hisH hisA TRUE 0.998 -3.000 0.124 0.004 Y NA
 289580 289581 LA_0126 LA_0127 hisA   TRUE 0.742 91.000 0.004 1.000 N NA
 289581 289582 LA_0127 LA_0128     FALSE 0.391 159.000 0.167 NA   NA
 289582 289583 LA_0128 LA_0129     FALSE 0.007 399.000 0.000 NA   NA
 289584 289585 LA_0130 LA_0131 thiD   FALSE 0.010 1007.000 0.000 1.000 N NA
 289585 289586 LA_0131 LA_0132     TRUE 0.808 25.000 0.000 NA   NA
 289586 289587 LA_0132 LA_0133     FALSE 0.005 552.000 0.000 NA   NA
 289588 289589 LA_0134 LA_0135     TRUE 0.975 -3.000 0.003 NA   NA
 289589 289590 LA_0135 LA_0136     FALSE 0.499 133.000 0.667 NA   NA
 289590 289591 LA_0136 LA_0137     FALSE 0.420 153.000 0.375 NA   NA
 289591 289592 LA_0137 LA_0138     TRUE 0.989 -3.000 0.250 NA   NA
 289595 289596 LA_0141 LA_0142     FALSE 0.014 263.000 0.000 NA   NA
 289596 289597 LA_0142 LA_0143     FALSE 0.126 117.000 0.000 NA   NA
 289598 289599 LA_0144 LA_0145 engB   TRUE 0.981 -3.000 0.003 1.000   NA
 289603 289604 LA_0149 LA_0150   mdlB TRUE 0.946 54.000 0.125 1.000   NA
 289605 289607 LA_0151 LA_0153     FALSE 0.309 167.000 1.000 NA   NA
 289607 289610 LA_0153 LA_0156     FALSE 0.004 1313.000 0.000 NA   NA
 289610 289611 LA_0156 LA_0157   aroC TRUE 0.801 62.000 0.002 NA   NA
 289611 289614 LA_0157 LA_0160 aroC nuoG FALSE 0.006 804.000 0.000 1.000   NA
 289614 289615 LA_0160 LA_0161 nuoG nuoI TRUE 0.991 -13.000 0.015 0.009   NA
 289619 289620 LA_0165 LA_0166 rpoE   TRUE 0.871 10.000 0.000 NA   NA
 289620 289623 LA_0166 LA_0169   frnE FALSE 0.004 1387.000 0.000 NA   NA
 289623 289625 LA_0169 LA_0171 frnE avtA FALSE 0.011 1191.000 0.000 1.000 N NA
 289625 289626 LA_0171 LA_0172 avtA   TRUE 0.718 88.000 0.019 NA   NA
 289626 406935 LA_0172 LA_r01   rrf FALSE 0.003 877.000 0.000 NA   NA
 406935 289629 LA_r01 LA_0175 rrf rpmH FALSE 0.026 216.000 0.000 NA   NA
 289629 289631 LA_0175 LA_0177 rpmH hlyA FALSE 0.049 327.000 0.005 NA   NA
 289631 289632 LA_0177 LA_0178 hlyA yidC TRUE 0.986 10.000 0.461 NA   NA
 289632 289633 LA_0178 LA_0179 yidC jag TRUE 0.978 32.000 0.254 1.000   NA
 289633 289634 LA_0179 LA_0180 jag trmE TRUE 0.989 -7.000 0.116 1.000   NA
 289634 289635 LA_0180 LA_0181 trmE sfcA TRUE 0.762 48.000 0.000 1.000   NA
 289635 289638 LA_0181 LA_0184 sfcA   FALSE 0.004 701.000 0.000 NA   NA
 289638 289639 LA_0184 LA_0185   fumC FALSE 0.630 87.000 0.003 NA   NA
 289640 289641 LA_0186 LA_0187     TRUE 0.896 -3.000 0.000 NA   NA
 289641 289642 LA_0187 LA_0188     TRUE 0.823 23.000 0.000 NA   NA
 289642 289643 LA_0188 LA_0189     FALSE 0.528 60.000 0.000 NA   NA
 289643 289645 LA_0189 LA_0191     FALSE 0.038 187.000 0.000 NA   NA
 289645 289646 LA_0191 LA_0192     TRUE 0.875 7.000 0.000 NA   NA
 289646 289647 LA_0192 LA_0193     TRUE 0.775 31.000 0.000 NA   NA
 289647 289648 LA_0193 LA_0194     TRUE 0.987 0.000 1.000 NA   NA
 289649 289652 LA_0195 LA_0198     FALSE 0.006 753.000 0.000 1.000   NA
 289652 289655 LA_0198 LA_0201     FALSE 0.006 415.000 0.000 NA   NA
 289655 289656 LA_0201 LA_0202     FALSE 0.573 54.000 0.000 NA   NA
 289656 289657 LA_0202 LA_0203     FALSE 0.004 1125.000 0.000 NA   NA
 289657 289658 LA_0203 LA_0204     TRUE 0.896 -3.000 0.000 NA   NA
 289658 289659 LA_0204 LA_0205     FALSE 0.350 77.000 0.000 NA   NA
 289659 289660 LA_0205 LA_0206     TRUE 0.871 10.000 0.000 NA   NA
 289660 289661 LA_0206 LA_0207     FALSE 0.667 46.000 0.000 NA   NA
 289661 289663 LA_0207 LA_0209     FALSE 0.020 229.000 0.000 NA   NA
 289663 289664 LA_0209 LA_0210     TRUE 0.896 -3.000 0.000 NA   NA
 289664 289665 LA_0210 LA_0211     TRUE 0.896 -3.000 0.000 NA   NA
 289665 289666 LA_0211 LA_0212     TRUE 0.896 0.000 0.000 NA   NA
 289666 289667 LA_0212 LA_0213     TRUE 0.869 12.000 0.000 NA   NA
 289667 289668 LA_0213 LA_0214     TRUE 0.896 0.000 0.000 NA   NA
 289668 289669 LA_0214 LA_0215     FALSE 0.022 224.000 0.000 NA   NA
 289669 289670 LA_0215 LA_0216     TRUE 0.876 -7.000 0.000 NA   NA
 289670 289671 LA_0216 LA_0217     FALSE 0.450 66.000 0.000 NA   NA
 289671 289672 LA_0217 LA_0218     TRUE 0.876 -7.000 0.000 NA   NA
 289672 289673 LA_0218 LA_0219     FALSE 0.003 870.000 0.000 NA   NA
 289673 289675 LA_0219 LA_0221     FALSE 0.004 1052.000 0.000 NA   NA
 289678 289679 LA_0224 LA_0225   dltE TRUE 0.792 83.000 0.011 1.000   NA
 289679 289680 LA_0225 LA_0226 dltE   TRUE 0.988 -3.000 0.085 NA   NA
 289680 289681 LA_0226 LA_0227     TRUE 0.980 20.000 0.063 NA   NA
 289682 289683 LA_0228 LA_0229   suhB TRUE 0.976 -3.000 0.003 NA   NA
 289685 289686 LA_0231 LA_0232     TRUE 0.997 -16.000 0.286 0.021 Y NA
 289686 289687 LA_0232 LA_0233     TRUE 0.998 -3.000 0.500 0.021 Y NA
 289687 289688 LA_0233 LA_0234     TRUE 0.988 -3.000 0.750 NA   NA
 289691 289692 LA_0237 LA_0238 cyoE ctaA TRUE 0.995 16.000 0.321 1.000 Y NA
 289694 289695 LA_0240 LA_0241     TRUE 0.976 26.000 0.080 NA   NA
 289695 289696 LA_0241 LA_0242   cyoA TRUE 0.975 47.000 0.240 0.049   NA
 289696 289697 LA_0242 LA_0243 cyoA cyoB TRUE 0.997 11.000 0.571 0.003 Y NA
 289697 289698 LA_0243 LA_0244 cyoB cyoC TRUE 0.997 -13.000 0.308 0.003 Y NA
 289698 289701 LA_0244 LA_0247 cyoC   FALSE 0.004 1533.000 0.000 NA   NA
 289701 289702 LA_0247 LA_0248     FALSE 0.004 662.000 0.000 NA   NA
 289702 289703 LA_0248 LA_0249     TRUE 0.787 86.000 0.600 NA   NA
 289703 289704 LA_0249 LA_0250     TRUE 0.949 42.000 0.021 NA   NA
 289704 289705 LA_0250 LA_0251   pckA TRUE 0.832 62.000 0.004 NA   NA
 289707 289708 LA_0253 LA_0254     TRUE 0.740 37.000 0.000 NA   NA
 289708 289709 LA_0254 LA_0255   parA TRUE 0.984 -7.000 1.000 NA   NA
 289710 289712 LA_0256 LA_0258 gatB dnaE FALSE 0.011 1456.000 0.000 1.000 N NA
 289713 289715 LA_0259 LA_0262   nlpD FALSE 0.004 735.000 0.000 NA   NA
 289716 289717 LA_0261 LA_0263     TRUE 0.969 36.000 0.286 NA   NA
 289717 289718 LA_0263 LA_0264     FALSE 0.436 144.000 0.750 NA   NA
 289718 289719 LA_0264 LA_0265     TRUE 0.850 -21.000 0.000 NA   NA
 289719 289720 LA_0265 LA_0266     TRUE 0.988 5.000 0.273 NA   NA
 289722 289723 LA_0268 LA_0269     FALSE 0.004 763.000 0.000 NA   NA
 289723 289725 LA_0269 LA_0271     FALSE 0.004 630.000 0.000 NA   NA
 289725 289726 LA_0271 LA_0272     TRUE 0.982 13.000 1.000 NA   NA
 289727 289728 LA_0273 LA_0274 lolE   TRUE 0.993 2.000 0.214 1.000 N NA
 289732 289733 LA_0278 LA_0279     FALSE 0.025 218.000 0.000 NA   NA
 289733 289734 LA_0279 LA_0280   crp TRUE 0.882 86.000 0.182 0.035   NA
 289734 289735 LA_0280 LA_0281 crp alkA TRUE 0.982 21.000 0.006 1.000 N NA
 289735 289737 LA_0281 LA_0283 alkA   FALSE 0.003 852.000 0.000 NA   NA
 289737 289738 LA_0283 LA_0284     TRUE 0.841 74.000 1.000 NA   NA
 289738 10350607 LA_0284 LA_0284a     FALSE 0.020 231.000 0.000 NA   NA
 10350607 289740 LA_0284a LA_0286     FALSE 0.004 583.000 0.000 NA   NA
 289742 289743 LA_0288 LA_0289 cyaA2   FALSE 0.040 223.000 0.000 1.000   NA
 289745 289746 LA_0290 LA_0292   trmA FALSE 0.512 61.000 0.000 NA   NA
 289747 289748 LA_0293 LA_0294     TRUE 0.937 2.000 0.000 1.000   NA
 289751 289752 LA_0297 LA_0298   dnaJ1 TRUE 0.937 2.000 0.000 1.000   NA
 289753 289754 LA_0299 LA_0300 cstA   TRUE 0.991 -3.000 0.013 1.000 N NA
 289754 289755 LA_0300 LA_0301     FALSE 0.018 308.000 0.000 1.000   NA
 289755 289756 LA_0301 LA_0302     TRUE 0.879 6.000 0.000 NA   NA
 289757 289758 LA_0303 LA_0304     TRUE 0.896 -3.000 0.000 NA   NA
 289760 289761 LA_0306 LA_0307     FALSE 0.004 663.000 0.000 NA   NA
 289762 399246 LA_0308 LA_t05 hemK tRNA-Arg-CCT FALSE 0.004 1210.000 0.000 NA   NA
 399246 289763 LA_t05 LA_0309 tRNA-Arg-CCT crp TRUE 0.889 3.000 0.000 NA   NA
 289763 289764 LA_0309 LA_0310 crp   TRUE 0.996 0.000 0.250 1.000 Y NA
 289764 289765 LA_0310 LA_0311     TRUE 0.992 11.000 0.150 1.000 N NA
 289765 289766 LA_0311 LA_0312     TRUE 0.986 19.000 0.019 1.000 N NA
 289766 289767 LA_0312 LA_0313   fusA FALSE 0.156 249.000 0.006 1.000 N NA
 10350608 289768 LA_0313a LA_0314   trkG FALSE 0.429 69.000 0.000 NA   NA
 289773 289774 LA_0319 LA_0320   thiX FALSE 0.007 715.000 0.000 1.000   NA
 289774 289775 LA_0320 LA_0321 thiX   FALSE 0.034 784.000 0.667 NA   NA
 289777 289779 LA_0323 LA_0325   adhP FALSE 0.004 680.000 0.000 NA   NA
 289779 289780 LA_0325 LA_0326 adhP ispA FALSE 0.027 322.000 0.000 1.000 N NA
 289780 289781 LA_0326 LA_0327 ispA tlyA TRUE 0.983 -19.000 0.005 1.000 N NA
 289781 289782 LA_0327 LA_0328 tlyA   FALSE 0.088 203.000 0.000 1.000 N NA
 289786 289787 LA_0332 LA_0333 ptps   TRUE 0.986 10.000 0.021 1.000   NA
 289787 289788 LA_0333 LA_0334     TRUE 0.776 78.000 0.004 1.000   NA
 289788 289789 LA_0334 LA_0335   pntB TRUE 0.995 3.000 0.065 0.001   NA
 289789 289791 LA_0335 LA_0337 pntB   FALSE 0.004 1475.000 0.000 NA   NA
 289791 289792 LA_0337 LA_0338     FALSE 0.007 386.000 0.000 NA   NA
 289797 289799 LA_0343 LA_0345   fliE FALSE 0.006 824.000 0.000 1.000   NA
 289799 289800 LA_0345 LA_0346 fliE flgC TRUE 0.998 3.000 0.156 0.006 Y NA
 289800 289801 LA_0346 LA_0347 flgC flgB TRUE 0.975 66.000 0.804 0.006 Y NA
 289803 289804 LA_0348 LA_0350     FALSE 0.007 397.000 0.000 NA   NA
 289804 289805 LA_0350 LA_0351     TRUE 0.972 33.000 0.333 NA   NA
 289805 289806 LA_0351 LA_0352     FALSE 0.034 198.000 0.000 NA   NA
 289807 289809 LA_0353 LA_0355     FALSE 0.006 456.000 0.000 NA   NA
 289809 289811 LA_0355 LA_0357     FALSE 0.012 285.000 0.000 NA   NA
 289814 289815 LA_0360 LA_0361 gcvP gcvH TRUE 0.986 40.000 0.054 1.000 Y NA
 289815 289816 LA_0361 LA_0362 gcvH gcvT TRUE 0.997 18.000 0.103 0.001 Y NA
 289817 289818 LA_0363 LA_0364     FALSE 0.005 482.000 0.000 NA   NA
 289821 289822 LA_0366 LA_0368 serC   TRUE 0.978 0.000 0.004 NA   NA
 289822 289823 LA_0368 LA_0369   rpiB FALSE 0.005 487.000 0.000 NA   NA
 289823 289824 LA_0369 LA_0370 rpiB   FALSE 0.134 244.000 0.038 NA   NA
 289825 289826 LA_0371 LA_0372     TRUE 0.896 -3.000 0.000 NA   NA
 289826 289827 LA_0372 LA_0373     TRUE 0.939 0.000 0.000 1.000   NA
 289827 289828 LA_0373 LA_0374     TRUE 0.946 50.000 0.333 NA   NA
 289828 289829 LA_0374 LA_0375     TRUE 0.988 -3.000 0.667 NA   NA
 289830 289831 LA_0376 LA_0377     FALSE 0.046 173.000 0.000 NA   NA
 289832 289833 LA_0378 LA_0379 hlyX   TRUE 0.896 -3.000 0.000 NA   NA
 289835 289836 LA_0381 LA_0382     FALSE 0.015 262.000 0.000 NA   NA
 289836 289837 LA_0382 LA_0383     FALSE 0.350 77.000 0.000 NA   NA
 289837 289838 LA_0383 LA_0384   wcaJ FALSE 0.005 474.000 0.000 NA   NA
 289839 289840 LA_0385 LA_0386     TRUE 0.986 -10.000 0.118 NA   NA
 289840 289841 LA_0386 LA_0387     TRUE 0.846 18.000 0.000 NA   NA
 289842 289843 LA_0388 LA_0389 miaB   TRUE 0.984 -19.000 0.006 1.000 N NA
 289843 289844 LA_0389 LA_0390     FALSE 0.184 217.000 1.000 NA   NA
 289844 289845 LA_0390 LA_0391   clpA TRUE 0.986 3.000 0.041 NA   NA
 289845 289846 LA_0391 LA_0392 clpA   FALSE 0.509 145.000 0.111 1.000   NA
 289846 289847 LA_0392 LA_0393     FALSE 0.007 382.000 0.000 NA   NA
 289848 289849 LA_0394 LA_0395     TRUE 0.899 65.000 0.500 NA   NA
 289849 10350609 LA_0395 LA_0395a     TRUE 0.830 -43.000 0.000 NA   NA
 10350609 289850 LA_0395a LA_0396     TRUE 0.975 28.000 0.500 NA   NA
 289850 289851 LA_0396 LA_0397     TRUE 0.945 -3.000 0.000 NA N NA
 399245 289855 LA_t06 LA_0401 tRNA-Pro-GGG   FALSE 0.015 258.000 0.000 NA   NA
 289856 289857 LA_0402 LA_0403 ccmA   TRUE 0.876 -7.000 0.000 NA   NA
 289857 289858 LA_0403 LA_0404     FALSE 0.287 84.000 0.000 NA   NA
 289859 289860 LA_0405 LA_0406 ksgA   TRUE 0.974 -37.000 0.016 NA   NA
 289860 289861 LA_0406 LA_0407     FALSE 0.556 56.000 0.000 NA   NA
 289861 289862 LA_0407 LA_0408   trpS FALSE 0.004 612.000 0.000 NA   NA
 289862 289863 LA_0408 LA_0409 trpS   TRUE 0.985 -3.000 0.017 NA   NA
 289863 289864 LA_0409 LA_0410     TRUE 0.987 6.000 0.143 NA   NA
 289864 289865 LA_0410 LA_0411   etfA FALSE 0.684 125.000 0.143 1.000 N NA
 289865 289866 LA_0411 LA_0412 etfA etfB TRUE 0.997 12.000 0.060 0.016 Y NA
 289866 289867 LA_0412 LA_0413 etfB   TRUE 0.804 83.000 0.060 NA   NA
 289868 289869 LA_0414 LA_0415 ivd   TRUE 0.939 -3.000 0.000 1.000   NA
 289871 289872 LA_0417 LA_0418     FALSE 0.010 467.000 0.000 1.000   NA
 289873 289874 LA_0419 LA_0420     FALSE 0.004 774.000 0.000 NA   NA
 289874 289875 LA_0420 LA_0421     FALSE 0.343 78.000 0.000 NA   NA
 289875 289877 LA_0421 LA_0423     FALSE 0.004 1173.000 0.000 NA   NA
 289877 289879 LA_0423 LA_0425     FALSE 0.004 720.000 0.000 NA   NA
 289879 289880 LA_0425 LA_0426     FALSE 0.036 195.000 0.000 NA   NA
 289880 289881 LA_0426 LA_0427     FALSE 0.004 668.000 0.000 NA   NA
 289881 289882 LA_0427 LA_0428     TRUE 0.972 18.000 0.008 NA   NA
 289882 289883 LA_0428 LA_0429     TRUE 0.872 9.000 0.000 NA   NA
 289884 289885 LA_0430 LA_0431     FALSE 0.004 1058.000 0.000 NA   NA
 289885 289886 LA_0431 LA_0432     TRUE 0.889 3.000 0.000 NA   NA
 289886 289887 LA_0432 LA_0433     TRUE 0.872 8.000 0.000 NA   NA
 289888 289892 LA_0434 LA_0438     FALSE 0.004 821.000 0.000 NA   NA
 289892 289893 LA_0438 LA_0439   gpmI FALSE 0.012 596.000 0.000 1.000 N NA
 289897 289898 LA_0443 LA_0444     FALSE 0.094 160.000 0.000 1.000   NA
 289901 289902 LA_0447 LA_0448   uup FALSE 0.576 117.000 0.750 NA   NA
 289902 289903 LA_0448 LA_0449 uup pspE FALSE 0.050 504.000 0.500 NA   NA
 289903 289904 LA_0449 LA_0450 pspE   FALSE 0.005 503.000 0.000 NA   NA
 289905 289906 LA_0451 LA_0452     FALSE 0.006 407.000 0.000 NA   NA
 289906 289909 LA_0452 LA_0455     FALSE 0.004 822.000 0.000 NA   NA
 289911 289912 LA_0457 LA_0458 paaJ   FALSE 0.145 111.000 0.000 NA   NA
 289913 289914 LA_0459 LA_0460 amiB1   TRUE 0.982 -3.000 0.009 NA   NA
 289917 289918 LA_0463 LA_0464 ribH nusB TRUE 0.993 1.000 0.347 1.000 N NA
 289918 289919 LA_0464 LA_0465 nusB   TRUE 0.983 -7.000 0.003 1.000 N NA
 289919 289920 LA_0465 LA_0466     TRUE 0.991 21.000 0.021 0.034 N NA
 289928 289931 LA_0474 LA_0477     FALSE 0.006 1102.000 0.000 1.000   NA
 289942 289943 LA_0488 LA_0489 uvrD   FALSE 0.018 491.000 0.000 0.075   NA
 289949 289950 LA_0495 LA_0496     FALSE 0.005 530.000 0.000 NA   NA
 289957 289958 LA_0503 LA_0504 dinP comF TRUE 0.870 28.000 0.000 1.000   NA
 289958 289959 LA_0504 LA_0505 comF   FALSE 0.218 94.000 0.000 NA   NA
 289960 289963 LA_0506 LA_0509     FALSE 0.004 1101.000 0.000 NA   NA
 289963 289965 LA_0509 LA_0511     FALSE 0.004 707.000 0.000 NA   NA
 289965 289967 LA_0511 LA_0512   lpxD FALSE 0.007 617.000 0.000 1.000   NA
 289967 289968 LA_0512 LA_0514 lpxD   FALSE 0.010 905.000 0.000 1.000 N NA
 289968 289969 LA_0514 LA_0515     FALSE 0.025 264.000 0.000 1.000   NA
 289971 289972 LA_0517 LA_0518     TRUE 0.896 -3.000 0.000 NA   NA
 289972 289974 LA_0518 LA_0520     FALSE 0.007 703.000 0.000 1.000   NA
 289974 289975 LA_0520 LA_0521     FALSE 0.472 64.000 0.000 NA   NA
 289975 289976 LA_0521 LA_0522   marR FALSE 0.017 250.000 0.000 NA   NA
 289977 289978 LA_0523 LA_0524   lat1 FALSE 0.006 901.000 0.000 1.000   NA
 289978 289979 LA_0524 LA_0525 lat1   TRUE 0.975 24.000 0.038 NA   NA
 289979 2159331 LA_0525 LA_r02   rrl FALSE 0.004 2153.000 0.000 NA   NA
 289986 289987 LA_0532 LA_0533   wecE FALSE 0.003 897.000 0.000 NA   NA
 289987 289988 LA_0533 LA_0534 wecE   FALSE 0.004 1267.000 0.000 NA   NA
 289994 289995 LA_0540 LA_0541     FALSE 0.168 105.000 0.000 NA   NA
 289995 289997 LA_0541 LA_0543     FALSE 0.018 307.000 0.000 1.000   NA
 289997 289998 LA_0543 LA_0544     FALSE 0.006 469.000 0.000 NA   NA
 290002 290003 LA_0548 LA_0549     TRUE 0.988 0.000 0.750 NA   NA
 290003 290004 LA_0549 LA_0550   acrB FALSE 0.004 1724.000 0.000 NA   NA
 290004 290005 LA_0550 LA_0551 acrB hisI FALSE 0.007 1059.000 0.000 NA N NA
 290005 290006 LA_0551 LA_0552 hisI   TRUE 0.881 49.000 0.002 NA   NA
 290006 290008 LA_0552 LA_0554     FALSE 0.004 1176.000 0.000 NA   NA
 290010 290011 LA_0556 LA_0557     TRUE 0.854 69.000 0.020 NA   NA
 290014 10350610 LA_0560 LA_0560a caiA   FALSE 0.086 135.000 0.000 NA   NA
 10350610 290015 LA_0560a LA_0561     FALSE 0.005 494.000 0.000 NA   NA
 290015 290016 LA_0561 LA_0562     FALSE 0.012 286.000 0.000 NA   NA
 290023 290024 LA_0569 LA_0570     FALSE 0.419 70.000 0.000 NA   NA
 290024 290025 LA_0570 LA_0571     TRUE 0.875 7.000 0.000 NA   NA
 290025 290026 LA_0571 LA_0572     TRUE 0.808 25.000 0.000 NA   NA
 290026 290027 LA_0572 LA_0573     FALSE 0.100 128.000 0.000 NA   NA
 290027 290028 LA_0573 LA_0574   dedA FALSE 0.016 253.000 0.000 NA   NA
 290028 290029 LA_0574 LA_0575 dedA   TRUE 0.954 41.000 0.030 NA   NA
 290032 290033 LA_0578 LA_0579   sul1 TRUE 0.954 42.000 0.037 NA   NA
 290033 290034 LA_0579 LA_0580 sul1   FALSE 0.004 636.000 0.000 NA   NA
 290034 290036 LA_0580 LA_0581     FALSE 0.113 124.000 0.000 NA   NA
 290036 290037 LA_0581 LA_0583   czcA1 TRUE 0.989 -34.000 0.400 1.000 N NA
 290037 290039 LA_0583 LA_0585 czcA1   FALSE 0.010 810.000 0.000 1.000 N NA
 290042 290043 LA_0588 LA_0589     FALSE 0.040 182.000 0.000 NA   NA
 290043 290044 LA_0589 LA_0590     FALSE 0.023 223.000 0.000 NA   NA
 290044 290045 LA_0590 LA_0591     FALSE 0.010 311.000 0.000 NA   NA
 290045 290046 LA_0591 LA_0592     FALSE 0.007 373.000 0.000 NA   NA
 290046 290047 LA_0592 LA_0593   copZ TRUE 0.846 18.000 0.000 NA   NA
 290047 290048 LA_0593 LA_0594 copZ zntA TRUE 0.995 -3.000 0.053 0.001   NA
 290049 290052 LA_0595 LA_0598     FALSE 0.003 894.000 0.000 NA   NA
 290060 290061 LA_0606 LA_0607     FALSE 0.537 59.000 0.000 NA   NA
 290061 290062 LA_0607 LA_0609     FALSE 0.016 254.000 0.000 NA   NA
 290064 290065 LA_0610 LA_0611   ftsA TRUE 0.989 2.000 0.389 NA   NA
 290065 290066 LA_0611 LA_0612 ftsA ftsZ TRUE 0.994 19.000 0.460 1.000 Y NA
 290069 290070 LA_0615 LA_0616   lipL41 TRUE 0.969 29.000 1.000 NA   NA
 290071 290072 LA_0617 LA_0618   nadA TRUE 0.978 -3.000 0.004 NA   NA
 290079 290081 LA_0625 LA_0627 recQ   FALSE 0.007 1315.000 0.000 NA N NA
 290081 290083 LA_0627 LA_0629     FALSE 0.003 1023.000 0.000 NA   NA
 290083 290084 LA_0629 LA_0630     TRUE 0.987 7.000 0.333 NA   NA
 290084 290085 LA_0630 LA_0631     TRUE 0.986 -7.000 0.667 NA   NA
 290085 290086 LA_0631 LA_0632   ptsN TRUE 0.794 86.000 0.286 NA   NA
 290086 290087 LA_0632 LA_0633 ptsN dppB TRUE 0.960 3.000 0.000 1.000 N NA
 290087 290088 LA_0633 LA_0634 dppB dppC TRUE 0.981 -3.000 0.000 0.021 N NA
 290088 290089 LA_0634 LA_0635 dppC slpM TRUE 0.989 -3.000 0.500 NA   NA
 290090 290091 LA_0636 LA_0637   folC FALSE 0.012 1550.000 0.000 1.000 N NA
 290091 290092 LA_0637 LA_0638 folC aroE TRUE 0.989 -3.000 0.006 1.000 N NA
 290093 290094 LA_0639 LA_0640     FALSE 0.004 747.000 0.000 NA   NA
 290094 290095 LA_0640 LA_0641     TRUE 0.896 -3.000 0.000 NA   NA
 290097 290098 LA_0643 LA_0645     TRUE 0.983 1.000 0.011 NA   NA
 290099 290100 LA_0644 LA_0646   rpsA TRUE 0.987 -3.000 0.040 NA   NA
 290100 290101 LA_0646 LA_0647 rpsA cspR TRUE 0.996 5.000 0.007 0.019 Y NA
 290101 290102 LA_0647 LA_0648 cspR   TRUE 0.945 46.000 0.007 NA N NA
 290102 290103 LA_0648 LA_0649   uvrB TRUE 0.978 7.000 0.003 NA N NA
 290103 290104 LA_0649 LA_0650 uvrB glpG TRUE 0.969 18.000 0.002 1.000   NA
 290104 10350611 LA_0650 LA_0650a glpG   FALSE 0.004 740.000 0.000 NA   NA
 290108 290109 LA_0654 LA_0655   dnaJ2 TRUE 0.986 10.000 0.200 NA   NA
 290109 290110 LA_0655 LA_0656 dnaJ2 manA TRUE 0.990 6.000 0.200 1.000   NA
 290110 290111 LA_0656 LA_0657 manA mcrA TRUE 0.989 10.000 0.143 1.000   NA
 290111 290113 LA_0657 LA_0659 mcrA   FALSE 0.030 1023.000 0.039 NA   NA
 290117 290119 LA_0663 LA_0665     FALSE 0.004 835.000 0.000 NA   NA
 290119 290120 LA_0665 LA_0666   mauG FALSE 0.483 78.000 0.000 1.000   NA
 10350612 290124 LA_0668 LA_0670     TRUE 0.756 34.000 0.000 NA   NA
 290124 290125 LA_0670 LA_0671   gltA FALSE 0.094 131.000 0.000 NA   NA
 290125 290127 LA_0671 LA_0673 gltA spsF FALSE 0.011 1339.000 0.000 1.000 N NA
 290127 290128 LA_0673 LA_0674 spsF   TRUE 0.990 -25.000 0.500 1.000 N NA
 290128 290129 LA_0674 LA_0675     TRUE 0.957 50.000 0.286 1.000   NA
 290129 290130 LA_0675 LA_0676     FALSE 0.199 242.000 0.286 1.000   NA
 290130 290132 LA_0676 LA_0678     FALSE 0.042 919.000 0.000 0.013 Y NA
 290132 10350613 LA_0678 LA_0678a     FALSE 0.019 238.000 0.000 NA   NA
 290136 290138 LA_0682 LA_0684     FALSE 0.005 518.000 0.000 NA   NA
 290138 290139 LA_0684 LA_0685     FALSE 0.130 254.000 0.773 NA   NA
 290139 290140 LA_0685 LA_0686     FALSE 0.093 300.000 0.711 NA   NA
 290140 290141 LA_0686 LA_0687     TRUE 0.986 3.000 0.948 NA   NA
 290141 290142 LA_0687 LA_0688     TRUE 0.987 -3.000 0.891 NA   NA
 290142 290143 LA_0688 LA_0689     TRUE 0.989 0.000 0.664 NA   NA
 290143 290144 LA_0689 LA_0690     TRUE 0.989 1.000 0.025 1.000   NA
 290144 290147 LA_0690 LA_0693   lysC FALSE 0.008 2498.000 0.000 1.000   NA
 290148 290149 LA_0694 LA_0695     FALSE 0.004 1406.000 0.000 NA   NA
 290150 290151 LA_0696 LA_0697     TRUE 0.986 8.000 0.120 NA   NA
 290151 290153 LA_0697 LA_0699     FALSE 0.399 153.000 0.080 NA   NA
 290153 290154 LA_0699 LA_0700     FALSE 0.264 198.000 0.100 NA   NA
 290154 290155 LA_0700 LA_0701     FALSE 0.011 407.000 0.000 1.000   NA
 290159 290160 LA_0705 LA_0706     FALSE 0.006 1181.000 0.000 1.000   NA
 290163 290164 LA_0709 LA_0710     TRUE 0.866 13.000 0.000 NA   NA
 290164 290165 LA_0710 LA_0711     FALSE 0.022 224.000 0.000 NA   NA
 290165 290166 LA_0711 LA_0712     TRUE 0.876 -7.000 0.000 NA   NA
 290166 290167 LA_0712 LA_0713     FALSE 0.029 206.000 0.000 NA   NA
 290167 290168 LA_0713 LA_0714     TRUE 0.828 -48.000 0.000 NA   NA
 290168 290169 LA_0714 LA_0715     FALSE 0.029 206.000 0.000 NA   NA
 290170 290171 LA_0716 LA_0717     FALSE 0.254 146.000 0.000 0.016   NA
 290174 290177 LA_0720 LA_0723   ruvC FALSE 0.036 1018.000 0.277 NA   NA
 290177 290180 LA_0723 LA_0726 ruvC   FALSE 0.012 1648.000 0.000 1.000 N NA
 290180 290181 LA_0726 LA_0727   carB FALSE 0.532 127.000 0.004 1.000 N NA
 10350614 10350615 LA_0727a LA_0727b     TRUE 0.832 -37.000 0.000 NA   NA
 290188 290189 LA_0734 LA_0735     TRUE 0.980 5.000 0.010 NA   NA
 290189 290190 LA_0735 LA_0736   fusA2 FALSE 0.004 663.000 0.000 NA   NA
 290190 290191 LA_0736 LA_0737 fusA2 tufB TRUE 0.978 51.000 0.002 0.001 Y NA
 290191 290192 LA_0737 LA_0738 tufB rpsJ TRUE 0.995 15.000 0.318 1.000 Y NA
 290192 290193 LA_0738 LA_0739 rpsJ rplC TRUE 0.997 12.000 0.467 0.025 Y NA
 290193 290194 LA_0739 LA_0740 rplC rplD TRUE 0.996 18.000 0.544 0.019 Y NA
 290194 290195 LA_0740 LA_0741 rplD rplW TRUE 0.998 -3.000 0.307 0.019 Y NA
 290195 290196 LA_0741 LA_0742 rplW rplB TRUE 0.997 4.000 0.849 0.018 Y NA
 290196 290197 LA_0742 LA_0743 rplB rpsS TRUE 0.997 9.000 0.820 0.025 Y NA
 290197 290198 LA_0743 LA_0744 rpsS rplV TRUE 0.997 0.000 0.769 0.025 Y NA
 290198 290199 LA_0744 LA_0745 rplV rpsC TRUE 0.997 13.000 0.719 0.025 Y NA
 290199 290200 LA_0745 LA_0746 rpsC rplP TRUE 0.995 23.000 0.828 0.025 Y NA
 290200 290201 LA_0746 LA_0747 rplP rpmC TRUE 0.994 -3.000 0.802 0.019   NA
 290201 290202 LA_0747 LA_0748 rpmC rpsQ TRUE 0.915 76.000 0.828 0.019   NA
 290202 290203 LA_0748 LA_0749 rpsQ rplN TRUE 0.997 2.000 0.791 0.025 Y NA
 290203 290204 LA_0749 LA_0750 rplN rplX TRUE 0.997 0.000 0.810 0.025 Y NA
 290204 290205 LA_0750 LA_0751 rplX rplE TRUE 0.997 4.000 0.758 0.019 Y NA
 290205 290206 LA_0751 LA_0752 rplE rpsN TRUE 0.996 20.000 0.496 0.019 Y NA
 290206 290207 LA_0752 LA_0753 rpsN rpsH TRUE 0.996 20.000 0.473 0.019 Y NA
 290207 290208 LA_0753 LA_0754 rpsH rplF TRUE 0.994 27.000 0.808 0.019 Y NA
 290208 290209 LA_0754 LA_0755 rplF rplR TRUE 0.997 4.000 0.815 0.019 Y NA
 290209 290210 LA_0755 LA_0756 rplR rpsE TRUE 0.997 2.000 0.814 0.025 Y NA
 290210 290211 LA_0756 LA_0757 rpsE rpmD TRUE 0.996 13.000 0.789 0.025 Y NA
 290211 290212 LA_0757 LA_0758 rpmD rplO TRUE 0.997 16.000 0.653 0.003 Y NA
 290212 290213 LA_0758 LA_0759 rplO secY TRUE 0.990 15.000 0.730 1.000 N NA
 290213 290214 LA_0759 LA_0760 secY adk TRUE 0.992 8.000 0.241 1.000 N NA
 290214 290215 LA_0760 LA_0761 adk infA TRUE 0.992 3.000 0.059 1.000 N NA
 290215 10350617 LA_0761 LA_0761a infA rpmJ TRUE 0.989 9.000 0.104 1.000   NA
 10350617 290216 LA_0761a LA_0762 rpmJ rpsM TRUE 0.994 4.000 0.194 0.019   NA
 290216 290217 LA_0762 LA_0763 rpsM rpsK TRUE 0.997 3.000 0.810 0.019 Y NA
 290217 290218 LA_0763 LA_0764 rpsK rpsD TRUE 0.997 12.000 0.509 0.025 Y NA
 290218 290219 LA_0764 LA_0765 rpsD rpoA TRUE 0.988 23.000 0.549 1.000 N NA
 290219 290220 LA_0765 LA_0766 rpoA rplQ TRUE 0.992 2.000 0.873 1.000 N NA
 290223 290227 LA_0769 LA_0773     FALSE 0.004 2146.000 0.000 NA   NA
 290230 290231 LA_0776 LA_0777     TRUE 0.979 -16.000 0.018 NA   NA
 290231 290232 LA_0777 LA_0778   pyrB TRUE 0.971 6.000 0.003 NA   NA
 290232 290233 LA_0778 LA_0779 pyrB   TRUE 0.962 1.000 0.000 1.000 N NA
 290233 290235 LA_0779 LA_0781     FALSE 0.005 509.000 0.000 NA   NA
 290235 290236 LA_0781 LA_0782     FALSE 0.512 61.000 0.000 NA   NA
 290238 290239 LA_0784 LA_0785     FALSE 0.006 401.000 0.000 NA   NA
 290240 290241 LA_0786 LA_0787   spoU TRUE 0.945 -3.000 0.000 NA N NA
 290241 290242 LA_0787 LA_0788 spoU   TRUE 0.989 -3.000 0.213 NA   NA
 290242 290243 LA_0788 LA_0789     TRUE 0.976 -22.000 0.014 NA   NA
 290243 290244 LA_0789 LA_0790   gltA TRUE 0.966 39.000 0.250 NA   NA
 290244 290245 LA_0790 LA_0791 gltA   FALSE 0.576 112.000 0.008 1.000   NA
 290248 290250 LA_0794 LA_0795     FALSE 0.017 244.000 0.000 NA   NA
 290250 290252 LA_0795 LA_0798     FALSE 0.004 790.000 0.000 NA   NA
 290252 290253 LA_0798 LA_0799     FALSE 0.581 120.000 0.600 NA   NA
 290253 290254 LA_0799 LA_0800   pdxA TRUE 0.942 58.000 0.022 1.000 N NA
 290254 290255 LA_0800 LA_0801 pdxA   TRUE 0.946 44.000 0.022 NA   NA
 290255 290256 LA_0801 LA_0802   pilF TRUE 0.981 19.000 0.667 NA   NA
 290258 290259 LA_0804 LA_0805     FALSE 0.168 105.000 0.000 NA   NA
 290259 290260 LA_0805 LA_0806   tmk FALSE 0.017 250.000 0.000 NA   NA
 290262 290263 LA_0808 LA_0809   degQ FALSE 0.105 223.000 0.000 0.003   NA
 290263 290264 LA_0809 LA_0810 degQ ruvB TRUE 0.986 1.000 0.003 1.000 N NA
 290264 290265 LA_0810 LA_0811 ruvB   TRUE 0.962 -25.000 0.003 NA   NA
 290265 290266 LA_0811 LA_0812     TRUE 0.985 15.000 0.500 NA   NA
 290266 290267 LA_0812 LA_0813     TRUE 0.869 12.000 0.000 NA   NA
 290268 290269 LA_0814 LA_0815     TRUE 0.746 36.000 0.000 NA   NA
 290269 290270 LA_0815 LA_0816   citB TRUE 0.990 1.000 0.000 0.026 Y NA
 290270 290271 LA_0816 LA_0817 citB   FALSE 0.004 659.000 0.000 NA   NA
 290271 290272 LA_0817 LA_0818     TRUE 0.978 24.000 0.667 NA   NA
 290273 290274 LA_0819 LA_0820     TRUE 0.988 -3.000 0.667 NA   NA
 290274 290275 LA_0820 LA_0821     TRUE 0.986 -3.000 0.026 NA   NA
 290277 290278 LA_0823 LA_0824     FALSE 0.597 116.000 0.667 NA   NA
 290278 290279 LA_0824 LA_0825     FALSE 0.071 218.000 0.000 1.000 N NA
 290279 290280 LA_0825 LA_0826     TRUE 0.854 -19.000 0.000 NA   NA
 290281 290282 LA_0827 LA_0828   paaJ TRUE 0.951 37.000 0.011 NA   NA
 290282 290283 LA_0828 LA_0829 paaJ   FALSE 0.287 84.000 0.000 NA   NA
 290283 290286 LA_0829 LA_0832   birA FALSE 0.004 1137.000 0.000 NA   NA
 290286 290287 LA_0832 LA_0833 birA   TRUE 0.993 2.000 0.147 1.000 N NA
 290289 290290 LA_0835 LA_0836     FALSE 0.038 186.000 0.000 NA   NA
 290290 290292 LA_0836 LA_0838   murD FALSE 0.004 1575.000 0.000 NA   NA
 290293 290294 LA_0839 LA_0840 spoIIAA trpC TRUE 0.987 7.000 0.008 1.000 N NA
 290294 290295 LA_0840 LA_0841 trpC   FALSE 0.006 1088.000 0.000 1.000   NA
 290295 290296 LA_0841 LA_0842     TRUE 0.944 31.000 0.003 NA   NA
 290296 290297 LA_0842 LA_0843     TRUE 0.984 15.000 0.091 NA   NA
 290297 290299 LA_0843 LA_0845     FALSE 0.010 1046.000 0.000 1.000 N NA
 290299 290300 LA_0845 LA_0846     TRUE 0.989 -3.000 0.021 1.000   NA
 290300 290301 LA_0846 LA_0847     FALSE 0.460 65.000 0.000 NA   NA
 290301 10350619 LA_0847 LA_0847a     FALSE 0.014 263.000 0.000 NA   NA
 10350619 290303 LA_0847a LA_0848   rplU FALSE 0.010 310.000 0.000 NA   NA
 290303 290304 LA_0848 LA_0850 rplU   TRUE 0.995 -3.000 0.208 NA Y NA
 290304 290305 LA_0850 LA_0851   rpmA TRUE 0.994 -10.000 0.203 NA Y NA
 290305 290306 LA_0851 LA_0852 rpmA obgE FALSE 0.675 115.000 0.335 1.000   NA
 290306 290307 LA_0852 LA_0853 obgE proB TRUE 0.988 14.000 0.206 1.000   NA
 290308 290309 LA_0854 LA_0855 proA nadD TRUE 0.993 4.000 0.170 1.000 N NA
 290309 290312 LA_0855 LA_0858 nadD   FALSE 0.004 1702.000 0.000 NA   NA
 290312 290314 LA_0858 LA_0860     FALSE 0.003 866.000 0.000 NA   NA
 290314 290315 LA_0860 LA_0861   spoIIAA TRUE 0.870 -10.000 0.000 NA   NA
 290317 290318 LA_0863 LA_0864 ilvB ilvA TRUE 0.925 42.000 0.000 0.002   NA
 290318 290319 LA_0864 LA_0865 ilvA   FALSE 0.641 48.000 0.000 NA   NA
 290331 290332 LA_0876 LA_0878 sigX dshA TRUE 0.983 11.000 1.000 NA   NA
 290336 290337 LA_0882 LA_0883     FALSE 0.573 54.000 0.000 NA   NA
 290338 290339 LA_0884 LA_0885 nuoN nuoM TRUE 0.998 -3.000 0.126 0.003 Y NA
 290339 290340 LA_0885 LA_0886 nuoM nuoL FALSE 0.250 449.000 0.183 0.003 Y NA
 290340 290341 LA_0886 LA_0887 nuoL nuoK TRUE 0.997 -6.000 0.790 0.008 Y NA
 290341 290342 LA_0887 LA_0888 nuoK nuoJ TRUE 0.998 -3.000 0.306 0.003 Y NA
 290342 290343 LA_0888 LA_0889 nuoJ nuoH TRUE 0.996 14.000 0.032 0.008 Y NA
 290343 290344 LA_0889 LA_0890 nuoH nuoF TRUE 0.997 -3.000 0.008 0.008 Y NA
 290344 290345 LA_0890 LA_0891 nuoF nuoE TRUE 0.997 16.000 0.061 0.008 Y NA
 290345 290346 LA_0891 LA_0892 nuoE nuoD TRUE 0.998 0.000 0.097 0.008 Y NA
 290346 290347 LA_0892 LA_0893 nuoD nuoC TRUE 0.998 2.000 0.096 0.008 Y NA
 290347 290348 LA_0893 LA_0894 nuoC nuoB TRUE 0.998 -3.000 0.125 0.003 Y NA
 290348 290349 LA_0894 LA_0895 nuoB nuoA TRUE 0.997 -9.000 0.498 0.003 Y NA
 290352 290353 LA_0898 LA_0899   maoC TRUE 0.983 13.000 0.039 NA   NA
 290353 290354 LA_0899 LA_0900 maoC marR TRUE 0.981 31.000 0.039 1.000 N NA
 290354 290357 LA_0900 LA_0903 marR   FALSE 0.007 1544.000 0.000 1.000   NA
 290357 290359 LA_0903 LA_0905     FALSE 0.004 766.000 0.000 NA   NA
 290360 290362 LA_0906 LA_0908     FALSE 0.007 399.000 0.000 NA   NA
 290363 290365 LA_0909 LA_0910 mgsA   FALSE 0.004 625.000 0.000 NA   NA
 290366 290367 LA_0912 LA_0913     TRUE 0.995 -3.000 0.200 0.031   NA
 290367 10350621 LA_0913 LA_0913a     FALSE 0.005 492.000 0.000 NA   NA
 10350621 290368 LA_0913a LA_0914     FALSE 0.679 45.000 0.000 NA   NA
 290368 290369 LA_0914 LA_0915   acuC FALSE 0.003 971.000 0.000 NA   NA
 290372 290373 LA_0918 LA_0919 caiD   TRUE 0.992 0.000 0.333 1.000   NA
 290377 290378 LA_0923 LA_0924     FALSE 0.495 62.000 0.000 NA   NA
 290378 290379 LA_0924 LA_0925     FALSE 0.068 149.000 0.000 NA   NA
 290379 290381 LA_0925 LA_0927     FALSE 0.007 600.000 0.000 1.000   NA
 290381 290383 LA_0927 LA_0929     FALSE 0.006 888.000 0.000 1.000   NA
 290383 290384 LA_0929 LA_0930     TRUE 0.989 6.000 0.012 1.000 N NA
 290386 290388 LA_0932 LA_0934 pldB   FALSE 0.007 1716.000 0.000 1.000   NA
 290389 290390 LA_0935 LA_0936     FALSE 0.126 117.000 0.000 NA   NA
 290390 290391 LA_0936 LA_0937     TRUE 0.892 2.000 0.000 NA   NA
 290391 290392 LA_0937 LA_0938     FALSE 0.004 753.000 0.000 NA   NA
 290392 290393 LA_0938 LA_0939     TRUE 0.977 2.000 0.004 NA   NA
 290393 290394 LA_0939 LA_0940     TRUE 0.973 -9.000 0.004 NA   NA
 290395 290396 LA_0941 LA_0942   nusA TRUE 0.987 2.000 0.759 NA   NA
 290396 290397 LA_0942 LA_0943 nusA infB TRUE 0.960 65.000 0.342 0.023 N NA
 290397 290398 LA_0943 LA_0944 infB rbfA TRUE 0.995 10.000 0.530 1.000 Y NA
 290398 290399 LA_0944 LA_0945 rbfA truB TRUE 0.993 -43.000 0.111 1.000 Y NA
 290399 290400 LA_0945 LA_0946 truB rpsO TRUE 0.971 52.000 0.013 1.000 Y NA
 290400 290401 LA_0946 LA_0947 rpsO pnp TRUE 0.995 12.000 0.335 1.000 Y NA
 290401 290402 LA_0947 LA_0948 pnp pqqL TRUE 0.983 22.000 0.057 1.000   NA
 290402 290404 LA_0948 LA_0950 pqqL   FALSE 0.004 778.000 0.000 NA   NA
 290404 290405 LA_0950 LA_0951     FALSE 0.013 271.000 0.000 NA   NA
 290405 290406 LA_0951 LA_0952   glpG TRUE 0.896 0.000 0.000 NA   NA
 290406 290408 LA_0952 LA_0954 glpG   FALSE 0.003 882.000 0.000 NA   NA
 290408 290410 LA_0954 LA_0956   gltB1 FALSE 0.006 423.000 0.000 NA   NA
 290412 290413 LA_0958 LA_0959     FALSE 0.004 616.000 0.000 NA   NA
 290414 290416 LA_0960 LA_0962     FALSE 0.008 344.000 0.000 NA   NA
 290416 290418 LA_0962 LA_0964   recQ FALSE 0.007 709.000 0.000 1.000   NA
 290419 290420 LA_0965 LA_0966 recC recB TRUE 0.997 -10.000 0.542 0.001 Y NA
 290420 290421 LA_0966 LA_0967 recB recD TRUE 0.998 -3.000 0.688 0.001 Y NA
 290421 290423 LA_0967 LA_0969 recD ccmA FALSE 0.028 314.000 0.000 1.000 N NA
 290423 290424 LA_0969 LA_0970 ccmA   TRUE 0.990 -3.000 0.048 1.000   NA
 290424 290425 LA_0970 LA_0971   fabG TRUE 0.924 10.000 0.000 1.000   NA
 290429 290432 LA_0975 LA_0978     FALSE 0.004 662.000 0.000 NA   NA
 290432 290433 LA_0978 LA_0979     FALSE 0.018 239.000 0.000 NA   NA
 290434 290437 LA_0980 LA_0983 thiC   FALSE 0.004 1259.000 0.000 NA   NA
 290437 290438 LA_0983 LA_0984   cdc9 FALSE 0.097 129.000 0.000 NA   NA
 290438 290439 LA_0984 LA_0985 cdc9   FALSE 0.274 104.000 0.000 1.000   NA
 290439 290440 LA_0985 LA_0986     FALSE 0.007 378.000 0.000 NA   NA
 290440 290443 LA_0986 LA_0989     FALSE 0.004 764.000 0.000 NA   NA
 290445 290446 LA_0991 LA_0992     TRUE 0.943 49.000 0.067 NA   NA
 290447 290448 LA_0993 LA_0994 cyaA4   TRUE 0.896 -3.000 0.000 NA   NA
 290448 290449 LA_0994 LA_0995     TRUE 0.882 5.000 0.000 NA   NA
 290449 290450 LA_0995 LA_0996     TRUE 0.896 0.000 0.000 NA   NA
 290450 290451 LA_0996 LA_0997     FALSE 0.005 541.000 0.000 NA   NA
 10350622 290453 LA_0997a LA_0999     TRUE 0.894 1.000 0.000 NA   NA
 290453 290454 LA_0999 LA_1000     FALSE 0.078 142.000 0.000 NA   NA
 290454 290455 LA_1000 LA_1001   vapC FALSE 0.199 98.000 0.000 NA   NA
 290455 290456 LA_1001 LA_1002 vapC vagC TRUE 0.989 0.000 0.359 NA   NA
 290456 290457 LA_1002 LA_1003 vagC   FALSE 0.017 248.000 0.000 NA   NA
 290457 290458 LA_1003 LA_1004     FALSE 0.019 232.000 0.000 NA   NA
 290458 290459 LA_1004 LA_1005     FALSE 0.021 226.000 0.000 NA   NA
 290460 290461 LA_1006 LA_1007   btuE FALSE 0.011 668.000 0.000 1.000 N NA
 290461 290462 LA_1007 LA_1008 btuE phuW FALSE 0.025 696.000 0.011 NA   NA
 290462 290463 LA_1008 LA_1009 phuW mrcA TRUE 0.955 37.000 0.016 NA   NA
 290463 290464 LA_1009 LA_1010 mrcA   TRUE 0.985 -10.000 0.667 NA   NA
 290464 290467 LA_1010 LA_1013     FALSE 0.004 1038.000 0.000 NA   NA
 290468 290469 LA_1014 LA_1015     FALSE 0.017 250.000 0.000 NA   NA
 290469 290470 LA_1015 LA_1016     TRUE 0.882 5.000 0.000 NA   NA
 290470 290471 LA_1016 LA_1017     TRUE 0.896 -3.000 0.000 NA   NA
 290471 290472 LA_1017 LA_1018     FALSE 0.010 313.000 0.000 NA   NA
 290472 290473 LA_1018 LA_1019     TRUE 0.896 -3.000 0.000 NA   NA
 290473 290474 LA_1019 LA_1020   rpmE TRUE 0.913 59.000 0.004 1.000 N NA
 290474 290475 LA_1020 LA_1021 rpmE rho TRUE 0.988 21.000 0.115 1.000 N NA
 290475 290476 LA_1021 LA_1022 rho   FALSE 0.118 148.000 0.000 1.000   NA
 290477 290478 LA_1023 LA_1024     TRUE 0.872 9.000 0.000 NA   NA
 290481 290483 LA_1027 LA_1029 sph1 sph2 FALSE 0.018 1005.000 0.000 0.002   NA
 290483 290484 LA_1029 LA_1030 sph2   FALSE 0.007 698.000 0.000 1.000   NA
 290490 290491 LA_1036 LA_1037     FALSE 0.009 327.000 0.000 NA   NA
 290491 290493 LA_1037 LA_1039     FALSE 0.006 421.000 0.000 NA   NA
 290493 290494 LA_1039 LA_1040     FALSE 0.174 104.000 0.000 NA   NA
 290494 290497 LA_1040 LA_1043   nlpD FALSE 0.004 738.000 0.000 NA   NA
 290497 290498 LA_1043 LA_1044 nlpD   TRUE 0.972 54.000 0.214 NA Y NA
 290498 290499 LA_1044 LA_1045   mrcA TRUE 0.846 102.000 0.125 NA Y NA
 290499 290500 LA_1045 LA_1046 mrcA   TRUE 0.875 7.000 0.000 NA   NA
 290501 290502 LA_1047 LA_1048 lysA ispD TRUE 0.987 -22.000 0.024 1.000 N NA
 290502 290505 LA_1048 LA_1051 ispD   FALSE 0.004 1592.000 0.000 NA   NA
 290505 290506 LA_1051 LA_1052     TRUE 0.896 -3.000 0.000 NA   NA
 290506 290507 LA_1052 LA_1053     TRUE 0.862 14.000 0.000 NA   NA
 290507 290508 LA_1053 LA_1054     TRUE 0.896 -3.000 0.000 NA   NA
 290508 290509 LA_1054 LA_1055     FALSE 0.158 107.000 0.000 NA   NA
 290509 290510 LA_1055 LA_1056     FALSE 0.512 61.000 0.000 NA   NA
 290510 290511 LA_1056 LA_1057     TRUE 0.896 -3.000 0.000 NA   NA
 290511 290512 LA_1057 LA_1058     TRUE 0.846 18.000 0.000 NA   NA
 290512 290513 LA_1058 LA_1059     TRUE 0.896 -3.000 0.000 NA   NA
 290513 290514 LA_1059 LA_1060     TRUE 0.896 -3.000 0.000 NA   NA
 290514 290515 LA_1060 LA_1061     TRUE 0.896 -3.000 0.000 NA   NA
 290515 290516 LA_1061 LA_1062     TRUE 0.896 0.000 0.000 NA   NA
 290516 290517 LA_1062 LA_1063     TRUE 0.896 -3.000 0.000 NA   NA
 290517 290518 LA_1063 LA_1064     TRUE 0.896 -3.000 0.000 NA   NA
 290518 290519 LA_1064 LA_1065     TRUE 0.889 3.000 0.000 NA   NA
 290519 290520 LA_1065 LA_1066     FALSE 0.074 145.000 0.000 NA   NA
 290520 290521 LA_1066 LA_1067     TRUE 0.896 0.000 0.000 NA   NA
 290523 290524 LA_1069 LA_1070   cyaA FALSE 0.605 126.000 0.667 1.000   NA
 290524 290525 LA_1070 LA_1071 cyaA   TRUE 0.879 6.000 0.000 NA   NA
 290525 290526 LA_1071 LA_1072     FALSE 0.004 665.000 0.000 NA   NA
 290526 290527 LA_1072 LA_1073     FALSE 0.636 112.000 0.341 NA   NA
 290527 290528 LA_1073 LA_1074   mhpD FALSE 0.004 734.000 0.000 NA   NA
 290533 290534 LA_1079 LA_1080   pepN TRUE 0.746 36.000 0.000 NA   NA
 290534 290535 LA_1080 LA_1081 pepN   FALSE 0.149 140.000 0.000 NA N NA
 290535 290536 LA_1081 LA_1082     TRUE 0.982 2.000 0.010 NA   NA
 290539 290540 LA_1085 LA_1086 uvrD   TRUE 0.935 3.000 0.000 1.000   NA
 290540 290541 LA_1086 LA_1087     TRUE 0.846 18.000 0.000 NA   NA
 290541 290542 LA_1087 LA_1088     TRUE 0.978 -30.000 1.000 NA   NA
 290542 290544 LA_1088 LA_1090     FALSE 0.004 573.000 0.000 NA   NA
 290548 290549 LA_1094 LA_1095     TRUE 0.939 -3.000 0.000 1.000   NA
 290550 290551 LA_1096 LA_1097 lpxB   TRUE 0.937 53.000 0.173 NA   NA
 290551 290552 LA_1097 LA_1098     TRUE 0.978 13.000 0.011 NA   NA
 290552 290553 LA_1098 LA_1099     TRUE 0.947 39.000 0.011 NA   NA
 290553 290554 LA_1099 LA_1100     TRUE 0.976 22.000 1.000 NA   NA
 290554 290555 LA_1100 LA_1101   sucD FALSE 0.172 287.000 0.222 1.000 N NA
 290555 290556 LA_1101 LA_1102 sucD sucC TRUE 0.997 13.000 0.059 0.001 Y NA
 290556 290557 LA_1102 LA_1103 sucC   FALSE 0.004 1209.000 0.000 NA   NA
 290557 290558 LA_1103 LA_1104   dnaJ3 TRUE 0.982 -31.000 0.400 NA   NA
 290559 290560 LA_1105 LA_1106 miaB   TRUE 0.984 -3.000 0.005 1.000   NA
 290560 290561 LA_1106 LA_1107     TRUE 0.949 32.000 0.005 NA   NA
 10350624 10350625 LA_t08 LA_t09 tRNA-Glu-TTC tRNA-Lys-TTT TRUE 0.846 18.000 0.000 NA   NA
 10350625 290564 LA_t09 LA_1110 tRNA-Lys-TTT purA FALSE 0.381 74.000 0.000 NA   NA
 290564 290565 LA_1110 LA_1111 purA hisS2 TRUE 0.980 38.000 0.161 1.000 N NA
 290566 290568 LA_1112 LA_1114 gpsA   FALSE 0.012 606.000 0.000 1.000 N NA
 290573 290575 LA_1119 LA_1121 dut   FALSE 0.004 1171.000 0.000 NA   NA
 290576 290577 LA_1122 LA_1123     FALSE 0.004 557.000 0.000 NA   NA
 290577 290578 LA_1123 LA_1124   cutE TRUE 0.963 0.000 0.000 1.000 N NA
 290582 290583 LA_1128 LA_1129 splB   TRUE 0.848 -22.000 0.000 NA   NA
 290583 290584 LA_1129 LA_1130   fadE1 FALSE 0.046 174.000 0.000 NA   NA
 290584 290585 LA_1130 LA_1131 fadE1 pcm FALSE 0.130 171.000 0.000 1.000 N NA
 290587 10350628 LA_1133 LA_1133a     FALSE 0.006 432.000 0.000 NA   NA
 10350628 290589 LA_1133a LA_1135     FALSE 0.004 726.000 0.000 NA   NA
 290589 290590 LA_1135 LA_1136     FALSE 0.006 459.000 0.000 NA   NA
 290590 290591 LA_1136 LA_1137     TRUE 0.985 22.000 0.300 1.000   NA
 290591 290592 LA_1137 LA_1138   miaB TRUE 0.989 9.000 0.300 1.000   NA
 290592 290593 LA_1138 LA_1139 miaB pgsA TRUE 0.987 -3.000 0.003 1.000 N NA
 290593 290594 LA_1139 LA_1140 pgsA trpD TRUE 0.979 -25.000 0.003 1.000 N NA
 290594 290595 LA_1140 LA_1141 trpD yajC TRUE 0.894 56.000 0.003 NA N NA
 290595 10350629 LA_1141 LA_1141a yajC   TRUE 0.977 -3.000 0.003 NA   NA
 10350629 290596 LA_1141a LA_1142   secD TRUE 0.983 11.000 0.038 NA   NA
 290596 290597 LA_1142 LA_1143 secD secF TRUE 0.998 5.000 0.244 0.001 Y NA
 290597 290598 LA_1143 LA_1144 secF ribD1 TRUE 0.993 0.000 0.100 1.000 N NA
 290598 290599 LA_1144 LA_1145 ribD1 ribC TRUE 0.990 -15.000 0.002 1.000 Y NA
 290599 290601 LA_1145 LA_1147 ribC ribB FALSE 0.097 1644.000 0.040 1.000 Y NA
 290601 290606 LA_1147 LA_1152 ribB   FALSE 0.004 1460.000 0.000 NA   NA
 290606 290609 LA_1152 LA_1155   sbp FALSE 0.004 1985.000 0.000 NA   NA
 290609 290610 LA_1155 LA_1156 sbp cysU TRUE 0.988 34.000 0.026 0.002 N NA
 290610 290611 LA_1156 LA_1157 cysU cysW TRUE 0.996 -3.000 0.935 0.001 N NA
 290611 290612 LA_1157 LA_1158 cysW cysA TRUE 0.996 2.000 0.587 1.000 Y NA
 290613 290615 LA_1159 LA_1161   fadL FALSE 0.004 1637.000 0.000 NA   NA
 290616 290617 LA_1162 LA_1163     TRUE 0.882 5.000 0.000 NA   NA
 290617 290618 LA_1163 LA_1164     TRUE 0.986 10.000 0.500 NA   NA
 290618 290620 LA_1164 LA_1166   pdxH FALSE 0.011 422.000 0.000 1.000   NA
 290620 290621 LA_1166 LA_1167 pdxH   FALSE 0.048 171.000 0.000 NA   NA
 290621 290622 LA_1167 LA_1168     TRUE 0.896 -3.000 0.000 NA   NA
 290627 290628 LA_1173 LA_1174 acs   FALSE 0.015 507.000 0.000 1.000 N NA
 290628 290629 LA_1174 LA_1175   mutL FALSE 0.082 206.000 0.000 1.000 N NA
 290629 290630 LA_1175 LA_1176 mutL   TRUE 0.958 -31.000 0.002 NA   NA
 290632 290633 LA_1178 LA_1179     TRUE 0.977 -3.000 0.003 NA   NA
 290634 290635 LA_1180 LA_1182   hisC FALSE 0.004 671.000 0.000 NA   NA
 290636 290637 LA_1181 LA_1183     TRUE 0.846 18.000 0.000 NA   NA
 290639 290640 LA_1185 LA_1186     FALSE 0.607 121.000 0.000 0.020 Y NA
 290640 290642 LA_1186 LA_1188     FALSE 0.006 1156.000 0.000 1.000   NA
 290642 290643 LA_1188 LA_1189     FALSE 0.051 165.000 0.000 NA   NA
 290643 290644 LA_1189 LA_1190     TRUE 0.941 52.000 0.286 NA   NA
 290645 290646 LA_1191 LA_1192     TRUE 0.803 26.000 0.000 NA   NA
 290646 10350630 LA_1192 LA_1192a     TRUE 0.870 -10.000 0.000 NA   NA
 10350630 290649 LA_1192a LA_1196     FALSE 0.004 684.000 0.000 NA   NA
 290650 290651 LA_1195 LA_1197   rsbU TRUE 0.979 -25.000 1.000 NA   NA
 290651 290652 LA_1197 LA_1198 rsbU ech4 TRUE 0.991 8.000 0.081 1.000 N NA
 290652 290654 LA_1198 LA_1200 ech4   FALSE 0.009 315.000 0.000 NA   NA
 290657 290658 LA_1203 LA_1204 dltB   FALSE 0.518 133.000 0.273 NA   NA
 290658 290659 LA_1204 LA_1205   rpoE TRUE 0.902 64.000 0.125 NA   NA
 290659 290660 LA_1205 LA_1206 rpoE   TRUE 0.987 -19.000 0.188 1.000   NA
 290660 290661 LA_1206 LA_1207     FALSE 0.007 691.000 0.000 1.000   NA
 290661 290663 LA_1207 LA_1209     FALSE 0.094 160.000 0.000 1.000   NA
 290667 290668 LA_1213 LA_1214   tlpB FALSE 0.004 1280.000 0.000 NA   NA
 290671 290673 LA_1217 LA_1219   glpG FALSE 0.004 731.000 0.000 NA   NA
 290674 290675 LA_1220 LA_1221   mrcA TRUE 0.990 -3.000 1.000 1.000   NA
 290675 290676 LA_1221 LA_1222 mrcA aceF TRUE 0.754 88.000 0.004 1.000 N NA
 290676 290677 LA_1222 LA_1223 aceF lpd TRUE 0.995 14.000 0.253 1.000 Y NA
 290677 290678 LA_1223 LA_1224 lpd sucA TRUE 0.988 24.000 0.005 1.000 Y NA
 290678 290679 LA_1224 LA_1225 sucA   FALSE 0.014 267.000 0.000 NA   NA
 290679 290680 LA_1225 LA_1226     FALSE 0.061 157.000 0.000 NA   NA
 290680 290682 LA_1226 LA_1228     FALSE 0.005 477.000 0.000 NA   NA
 290684 290685 LA_1230 LA_1231   htpG1 TRUE 0.896 -3.000 0.000 NA   NA
 290685 290687 LA_1231 LA_1233 htpG1   FALSE 0.011 693.000 0.000 1.000 N NA
 290687 290688 LA_1233 LA_1234     FALSE 0.008 525.000 0.000 1.000   NA
 290688 290689 LA_1234 LA_1235     TRUE 0.861 -15.000 0.000 NA   NA
 290689 290692 LA_1235 LA_1238     FALSE 0.004 1844.000 0.000 NA   NA
 290692 290693 LA_1238 LA_1239   carA TRUE 0.973 6.000 0.004 NA   NA
 290695 10350631 LA_1241 LA_1241a     TRUE 0.886 4.000 0.000 NA   NA
 290696 290697 LA_1242 LA_1243 infC rpmI TRUE 0.990 33.000 0.652 1.000 Y NA
 290697 290698 LA_1243 LA_1244 rpmI rplT TRUE 0.997 0.000 0.928 0.018 Y NA
 290698 290699 LA_1244 LA_1245 rplT   FALSE 0.675 88.000 0.003 1.000   NA
 290699 290700 LA_1245 LA_1246   zapA TRUE 0.971 8.000 0.003 NA   NA
 290700 290701 LA_1246 LA_1247 zapA   TRUE 0.968 30.000 0.034 NA   NA
 290701 290704 LA_1247 LA_1250   cheW FALSE 0.012 609.000 0.000 1.000 N NA
 290704 290705 LA_1250 LA_1251 cheW cheA TRUE 0.998 0.000 0.070 0.012 Y NA
 290705 290706 LA_1251 LA_1252 cheA cheB TRUE 0.997 6.000 0.028 0.012 Y NA
 290706 290707 LA_1252 LA_1253 cheB cheY TRUE 0.997 2.000 0.028 0.020 Y NA
 290707 290708 LA_1253 LA_1254 cheY scpA TRUE 0.966 18.000 0.004 NA   NA
 290708 290709 LA_1254 LA_1255 scpA scpB TRUE 0.981 -33.000 0.570 NA   NA
 290709 290710 LA_1255 LA_1256 scpB pheA TRUE 0.985 -7.000 0.009 NA N NA
 290710 290711 LA_1256 LA_1257 pheA tyrA TRUE 0.996 -3.000 0.057 1.000 Y NA
 290711 290712 LA_1257 LA_1258 tyrA aroA TRUE 0.994 -19.000 0.100 1.000 Y NA
 290712 290713 LA_1258 LA_1259 aroA cmk TRUE 0.992 -7.000 0.209 1.000 N NA
 290713 290714 LA_1259 LA_1260 cmk rpsA TRUE 0.962 53.000 0.281 1.000 N NA
 290714 290715 LA_1260 LA_1261 rpsA   TRUE 0.965 25.000 0.003 1.000   NA
 290715 290716 LA_1261 LA_1262   hisG TRUE 0.980 0.000 0.002 1.000   NA
 290716 290717 LA_1262 LA_1263 hisG rpmF FALSE 0.032 297.000 0.000 1.000 N NA
 290717 290718 LA_1263 LA_1264 rpmF plsX TRUE 0.992 6.000 0.418 1.000 N NA
 290718 290725 LA_1264 LA_1271 plsX   FALSE 0.004 1838.000 0.000 NA   NA
 290726 290727 LA_1272 LA_1273     FALSE 0.003 1022.000 0.000 NA   NA
 290729 290730 LA_1275 LA_1276     FALSE 0.072 146.000 0.000 NA   NA
 290736 290737 LA_1282 LA_1283     TRUE 0.775 31.000 0.000 NA   NA
 290737 290738 LA_1283 LA_1284   lolE TRUE 0.896 0.000 0.000 NA   NA
 290738 290739 LA_1284 LA_1285 lolE salX TRUE 0.993 2.000 0.067 1.000 N NA
 290739 290740 LA_1285 LA_1286 salX   TRUE 0.862 64.000 0.004 1.000   NA
 290740 290743 LA_1286 LA_1289     FALSE 0.004 621.000 0.000 NA   NA
 290744 290745 LA_1290 LA_1291     TRUE 0.830 -43.000 0.000 NA   NA
 290745 290746 LA_1291 LA_1292     FALSE 0.005 502.000 0.000 NA   NA
 290746 290747 LA_1292 LA_1293     TRUE 0.986 -16.000 0.008 1.000 N NA
 290749 290751 LA_1295 LA_1297     FALSE 0.005 544.000 0.000 NA   NA
 290756 290757 LA_1302 LA_1303 smpB engA TRUE 0.969 25.000 0.005 1.000   NA
 290757 290758 LA_1303 LA_1304 engA   TRUE 0.988 -3.000 0.014 1.000   NA
 290758 290759 LA_1304 LA_1305     TRUE 0.974 -25.000 0.012 NA   NA
 290759 290760 LA_1305 LA_1306     TRUE 0.761 89.000 0.667 NA   NA
 290764 290766 LA_1310 LA_1312     FALSE 0.004 567.000 0.000 NA   NA
 290766 10350632 LA_1312 LA_t11   tRNA-Met-CAT TRUE 0.823 23.000 0.000 NA   NA
 10350632 10350633 LA_t11 LA_1312a tRNA-Met-CAT   FALSE 0.512 61.000 0.000 NA   NA
 290767 290771 LA_1313 LA_1317 glnA   FALSE 0.004 792.000 0.000 NA   NA
 290775 290777 LA_1321 LA_1323 dsbD purL FALSE 0.011 1357.000 0.000 1.000 N NA
 290777 290778 LA_1323 LA_1324 purL   TRUE 0.976 16.000 0.004 1.000   NA
 290778 290779 LA_1324 LA_1325   ileS TRUE 0.980 8.000 0.004 1.000   NA
 290780 290781 LA_1326 LA_1327     TRUE 0.989 -3.000 0.600 NA   NA
 290782 290783 LA_1328 LA_1329     TRUE 0.982 16.000 0.750 NA   NA
 290783 290784 LA_1329 LA_1330     TRUE 0.896 -3.000 0.000 NA   NA
 290784 290785 LA_1330 LA_1331     FALSE 0.096 130.000 0.000 NA   NA
 290787 290788 LA_1333 LA_1334 gatA   FALSE 0.006 968.000 0.000 1.000   NA
 290788 290789 LA_1334 LA_1335   aarF TRUE 0.985 12.000 0.111 NA   NA
 290789 290790 LA_1335 LA_1336 aarF lspA TRUE 0.989 -3.000 0.111 NA   NA
 290790 290791 LA_1336 LA_1337 lspA crp TRUE 0.990 5.000 0.074 NA N NA
 290791 290792 LA_1337 LA_1338 crp perM TRUE 0.984 -7.000 0.034 NA   NA
 290793 290794 LA_1339 LA_1340   nctP1 FALSE 0.035 309.000 0.000 0.072   NA
 290799 290801 LA_1345 LA_1347     FALSE 0.018 240.000 0.000 NA   NA
 290801 290802 LA_1347 LA_1348     TRUE 0.995 -7.000 0.047 1.000 Y NA
 290805 290807 LA_1351 LA_1353 capA1   FALSE 0.004 1040.000 0.000 NA   NA
 290807 290808 LA_1353 LA_1354     FALSE 0.697 75.000 0.000 0.022   NA
 290808 290810 LA_1354 LA_1356   cirA FALSE 0.008 595.000 0.000 1.000   NA
 290810 290811 LA_1356 LA_1357 cirA   TRUE 0.988 2.000 0.667 NA   NA
 290811 290812 LA_1357 LA_1358   arp FALSE 0.004 624.000 0.000 NA   NA
 290812 290813 LA_1358 LA_1359 arp   FALSE 0.005 478.000 0.000 NA   NA
 290813 290815 LA_1359 LA_1361     FALSE 0.003 964.000 0.000 NA   NA
 290815 290816 LA_1361 LA_1362     FALSE 0.024 220.000 0.000 NA   NA
 290816 290817 LA_1362 LA_1363     FALSE 0.036 195.000 0.000 NA   NA
 290817 290818 LA_1363 LA_1364     TRUE 0.981 7.000 0.014 NA   NA
 290818 290819 LA_1364 LA_1365   dltB TRUE 0.926 36.000 0.002 NA   NA
 290819 290820 LA_1365 LA_1366 dltB   TRUE 0.984 -22.000 0.273 NA   NA
 290826 290828 LA_1372 LA_1374 tetA1   FALSE 0.003 1006.000 0.000 NA   NA
 290829 290831 LA_1375 LA_1377     FALSE 0.006 881.000 0.000 1.000   NA
 290832 290836 LA_1378 LA_1382 bipA   FALSE 0.011 1297.000 0.000 1.000 N NA
 290836 290837 LA_1382 LA_1383     FALSE 0.008 354.000 0.000 NA   NA
 290838 290839 LA_1384 LA_1385     FALSE 0.054 160.000 0.000 NA   NA
 290839 290842 LA_1385 LA_1388   grs1 FALSE 0.004 1226.000 0.000 NA   NA
 290843 290844 LA_1389 LA_1390     TRUE 0.987 -3.000 1.000 NA   NA
 290844 290845 LA_1390 LA_1391   prmA TRUE 0.984 -3.000 0.014 NA   NA
 290845 290846 LA_1391 LA_1392 prmA rbsK TRUE 0.987 5.000 0.014 NA N NA
 290847 290850 LA_1393 LA_1396     FALSE 0.004 605.000 0.000 NA   NA
 290850 290851 LA_1396 LA_1397     TRUE 0.916 59.000 0.750 NA   NA
 290851 290852 LA_1397 LA_1398     TRUE 0.875 7.000 0.000 NA   NA
 290854 290856 LA_1400 LA_1402     FALSE 0.003 984.000 0.000 NA   NA
 290856 290857 LA_1402 LA_1403     FALSE 0.004 2121.000 0.000 NA   NA
 290857 290858 LA_1403 LA_1404     TRUE 0.869 12.000 0.000 NA   NA
 290863 290864 LA_1409 LA_1410 glyA lplA TRUE 0.969 40.000 0.012 1.000 N NA
 290864 290866 LA_1410 LA_1412 lplA   FALSE 0.003 887.000 0.000 NA   NA
 290868 290870 LA_1413 LA_1416   prpB FALSE 0.004 696.000 0.000 NA   NA
 290870 290871 LA_1416 LA_1417 prpB gloA FALSE 0.013 370.000 0.000 1.000   NA
 290873 290874 LA_1419 LA_1420 cyaA   TRUE 0.808 25.000 0.000 NA   NA
 290874 290875 LA_1420 LA_1421     TRUE 0.988 3.000 0.667 NA   NA
 290875 290876 LA_1421 LA_1422     TRUE 0.966 38.000 0.154 NA   NA
 290876 290877 LA_1422 LA_1423   fabH TRUE 0.969 25.000 0.015 NA   NA
 290877 290878 LA_1423 LA_1424 fabH scoA TRUE 0.983 34.000 0.015 NA Y NA
 290879 290881 LA_1425 LA_1427   fabG FALSE 0.007 367.000 0.000 NA   NA
 290881 290882 LA_1427 LA_1428 fabG ptc1 FALSE 0.011 698.000 0.000 1.000 N NA
 290883 290884 LA_1429 LA_1430   fabB TRUE 0.985 11.000 0.667 NA   NA
 290884 290886 LA_1430 LA_1432 fabB   FALSE 0.011 1351.000 0.000 1.000 N NA
 290886 290887 LA_1432 LA_1433     FALSE 0.011 300.000 0.000 NA   NA
 290887 290889 LA_1433 LA_1435     FALSE 0.004 1696.000 0.000 NA   NA
 290889 290890 LA_1435 LA_1436   hit TRUE 0.969 17.000 0.005 NA   NA
 290890 290891 LA_1436 LA_1437 hit nagC TRUE 0.994 -3.000 0.005 1.000 Y NA
 290891 290892 LA_1437 LA_1438 nagC salX TRUE 0.993 -3.000 0.086 1.000 N NA
 290892 290893 LA_1438 LA_1439 salX   TRUE 0.991 -3.000 0.500 1.000   NA
 290895 290897 LA_1441 LA_1444     FALSE 0.003 862.000 0.000 NA   NA
 290898 290899 LA_1443 LA_1445     TRUE 0.989 0.000 0.250 NA   NA
 290899 290900 LA_1445 LA_1446   czcB TRUE 0.994 18.000 0.375 1.000 Y NA
 290900 290901 LA_1446 LA_1447 czcB lexA TRUE 0.962 53.000 0.167 1.000 N NA
 290901 290902 LA_1447 LA_1448 lexA   TRUE 0.966 39.000 0.250 NA   NA
 290902 290903 LA_1448 LA_1449   prc TRUE 0.976 -10.000 0.006 NA   NA
 290903 290904 LA_1449 LA_1450 prc qri7 TRUE 0.993 5.000 0.017 0.033 N NA
 290904 290905 LA_1450 LA_1451 qri7 pssA TRUE 0.986 -3.000 0.003 1.000 N NA
 290906 290907 LA_1452 LA_1453     FALSE 0.031 203.000 0.000 NA   NA
 290907 290908 LA_1453 LA_1454     TRUE 0.896 -3.000 0.000 NA   NA
 290909 290910 LA_1455 LA_1456   radC TRUE 0.988 -3.000 0.667 NA   NA
 290910 290911 LA_1456 LA_1457 radC tagG TRUE 0.989 -6.000 0.050 NA N NA
 290911 290912 LA_1457 LA_1458 tagG tagH TRUE 0.995 -3.000 0.050 NA Y NA
 290912 290913 LA_1458 LA_1459 tagH ugd TRUE 0.980 49.000 0.059 1.000 Y NA
 290916 290917 LA_1462 LA_1463 purK purE TRUE 0.997 12.000 0.201 0.001 Y NA
 290917 290918 LA_1463 LA_1464 purE murF TRUE 0.930 51.000 0.003 1.000 N NA
 290921 290922 LA_1467 LA_1468     TRUE 0.879 6.000 0.000 NA   NA
 290922 10350636 LA_1468 LA_1468a     TRUE 0.979 22.000 0.667 NA   NA
 10350636 290924 LA_1468a LA_1470     FALSE 0.004 701.000 0.000 NA   NA
 290933 290934 LA_1479 LA_1480     TRUE 0.892 2.000 0.000 NA   NA
 290934 290935 LA_1480 LA_1481   proC TRUE 0.892 2.000 0.000 NA   NA
 290937 290939 LA_1483 LA_1484     FALSE 0.036 1141.000 0.143 NA   NA
 290939 290940 LA_1484 LA_1486     TRUE 0.983 -21.000 0.667 NA   NA
 290940 290941 LA_1486 LA_1487   mnmA TRUE 0.983 -3.000 0.004 1.000   NA
 290941 290942 LA_1487 LA_1488 mnmA lldD TRUE 0.989 17.000 0.006 0.097 N NA
 290942 290943 LA_1488 LA_1489 lldD   TRUE 0.812 81.000 0.048 NA   NA
 290943 290944 LA_1489 LA_1490   rluA TRUE 0.985 9.000 0.088 NA   NA
 290944 290945 LA_1490 LA_1491 rluA nhaC TRUE 0.988 -3.000 0.019 1.000   NA
 290945 290946 LA_1491 LA_1492 nhaC   TRUE 0.994 9.000 0.047 0.001   NA
 290946 290947 LA_1492 LA_1493   nlpD FALSE 0.265 197.000 0.019 1.000   NA
 290947 290948 LA_1493 LA_1494 nlpD   FALSE 0.058 159.000 0.000 NA   NA
 290948 290949 LA_1494 LA_1495     FALSE 0.018 243.000 0.000 NA   NA
 290949 290950 LA_1495 LA_1496     TRUE 0.781 30.000 0.000 NA   NA
 290951 290952 LA_1497 LA_1498     TRUE 0.816 24.000 0.000 NA   NA
 290952 290953 LA_1498 LA_1499     FALSE 0.243 89.000 0.000 NA   NA
 290961 290962 LA_1507 LA_1508     TRUE 0.985 8.000 0.667 NA   NA
 290962 290964 LA_1508 LA_1510     FALSE 0.005 532.000 0.000 NA   NA
 290965 290966 LA_1511 LA_1513 nadB prc TRUE 0.990 2.000 0.013 1.000 N NA
 290969 290970 LA_1515 LA_1516   miaA TRUE 0.985 10.000 0.017 1.000   NA
 290970 290971 LA_1516 LA_1517 miaA hfq TRUE 0.982 17.000 0.017 1.000   NA
 290971 10350638 LA_1517 LA_1517a hfq   TRUE 0.989 0.000 0.667 NA   NA
 10350638 290972 LA_1517a LA_1518   manC TRUE 0.986 -3.000 0.032 NA   NA
 290974 290975 LA_1520 LA_1521   cheW TRUE 0.985 9.000 0.750 NA   NA
 290975 290976 LA_1521 LA_1522 cheW   TRUE 0.923 -10.000 0.000 1.000   NA
 290977 290978 LA_1523 LA_1524     TRUE 0.988 -3.000 0.667 NA   NA
 290978 290980 LA_1524 LA_1526     FALSE 0.041 181.000 0.000 NA   NA
 290982 10350639 LA_1528 LA_1528a     FALSE 0.553 71.000 0.000 1.000   NA
 290989 290990 LA_1535 LA_1536     FALSE 0.135 114.000 0.000 NA   NA
 290990 290991 LA_1536 LA_1537     TRUE 0.894 1.000 0.000 NA   NA
 290992 290993 LA_1538 LA_1539     TRUE 0.832 21.000 0.000 NA   NA
 290993 290995 LA_1539 LA_1541     FALSE 0.004 766.000 0.000 NA   NA
 290995 290996 LA_1541 LA_1542     TRUE 0.981 -37.000 0.192 NA   NA
 290996 290997 LA_1542 LA_1543     FALSE 0.006 472.000 0.000 NA   NA
 291000 291002 LA_1547 LA_1548   kefB FALSE 0.225 134.000 0.000 1.000 N NA
 291002 291003 LA_1548 LA_1549 kefB   TRUE 0.849 47.000 0.000 1.000 N NA
 291003 291004 LA_1549 LA_1550     TRUE 0.986 1.000 1.000 NA   NA
 291004 291006 LA_1550 LA_1552     FALSE 0.043 177.000 0.000 NA   NA
 291007 291008 LA_1553 LA_1554     TRUE 0.964 41.000 0.333 NA   NA
 291008 291009 LA_1554 LA_1555     TRUE 0.978 -13.000 0.013 NA   NA
 291009 291010 LA_1555 LA_1556     FALSE 0.068 347.000 0.013 1.000   NA
 291010 291013 LA_1556 LA_1559     FALSE 0.008 345.000 0.000 NA   NA
 291014 291017 LA_1560 LA_1563   ibpA FALSE 0.004 1379.000 0.000 NA   NA
 291017 291018 LA_1563 LA_1564 ibpA ibpA TRUE 0.992 21.000 0.250 NA Y NA
 291018 291019 LA_1564 LA_1565 ibpA   FALSE 0.006 469.000 0.000 NA   NA
 291019 291020 LA_1565 LA_1566     FALSE 0.019 238.000 0.000 NA   NA
 291020 291021 LA_1566 LA_1567     FALSE 0.003 946.000 0.000 NA   NA
 291021 291022 LA_1567 LA_1568     TRUE 0.854 -19.000 0.000 NA   NA
 291022 291023 LA_1568 LA_1569     FALSE 0.006 448.000 0.000 NA   NA
 291023 291026 LA_1569 LA_1572     FALSE 0.003 889.000 0.000 NA   NA
 291030 291031 LA_1576 LA_1577   wcaG TRUE 0.989 5.000 0.059 1.000   NA
 291031 291032 LA_1577 LA_1578 wcaG   TRUE 0.911 17.000 0.000 1.000   NA
 291032 291033 LA_1578 LA_1579   gmhA TRUE 0.856 32.000 0.000 1.000   NA
 291033 291034 LA_1579 LA_1580 gmhA wcaG TRUE 0.979 7.000 0.000 1.000 Y NA
 291034 291035 LA_1580 LA_1581 wcaG gcd1 TRUE 0.976 -19.000 0.000 1.000 Y NA
 291035 291036 LA_1581 LA_1582 gcd1 rfaE TRUE 0.991 -3.000 0.000 0.017 Y NA
 291036 291037 LA_1582 LA_1583 rfaE wcaG TRUE 0.996 3.000 0.222 1.000 Y NA
 291037 291038 LA_1583 LA_1584 wcaG   TRUE 0.896 -3.000 0.000 NA   NA
 291038 291039 LA_1584 LA_1585   tktN1 TRUE 0.986 13.000 0.308 NA   NA
 291039 291040 LA_1585 LA_1586 tktN1 tktC1 TRUE 0.994 -9.000 0.778 NA Y NA
 291040 291041 LA_1586 LA_1587 tktC1   FALSE 0.007 380.000 0.000 NA   NA
 291041 291042 LA_1587 LA_1588     TRUE 0.987 -3.000 0.857 NA   NA
 291042 291043 LA_1588 LA_1589     TRUE 0.886 4.000 0.000 NA   NA
 291043 291044 LA_1589 LA_1590     TRUE 0.926 7.000 0.000 1.000   NA
 291046 291047 LA_1592 LA_1593 snoG1   TRUE 0.876 -7.000 0.000 NA   NA
 291047 291048 LA_1593 LA_1594   snoG2 TRUE 0.896 -3.000 0.000 NA   NA
 291048 291049 LA_1594 LA_1595 snoG2 wecE TRUE 0.892 2.000 0.000 NA   NA
 291049 291050 LA_1595 LA_1596 wecE   TRUE 0.992 -7.000 0.100 1.000 N NA
 291050 291051 LA_1596 LA_1597     FALSE 0.013 271.000 0.000 NA   NA
 291051 291052 LA_1597 LA_1598   cysE2 FALSE 0.070 148.000 0.000 NA   NA
 291052 291053 LA_1598 LA_1599 cysE2   TRUE 0.896 -3.000 0.000 NA   NA
 291053 291054 LA_1599 LA_1600   sunT FALSE 0.100 128.000 0.000 NA   NA
 291054 291055 LA_1600 LA_1601 sunT   FALSE 0.086 135.000 0.000 NA   NA
 291055 291056 LA_1601 LA_1602     TRUE 0.851 17.000 0.000 NA   NA
 291056 291057 LA_1602 LA_1603     TRUE 0.986 2.000 0.038 NA   NA
 291057 291058 LA_1603 LA_1604     FALSE 0.061 157.000 0.000 NA   NA
 291058 291059 LA_1604 LA_1605   neuA FALSE 0.046 174.000 0.000 NA   NA
 291059 291060 LA_1605 LA_1606 neuA wcaG TRUE 0.995 3.000 0.020 1.000 Y NA
 291060 291061 LA_1606 LA_1607 wcaG wecE TRUE 0.996 0.000 0.418 1.000 Y NA
 291061 291062 LA_1607 LA_1608 wecE   TRUE 0.990 -7.000 0.185 1.000   NA
 291062 291063 LA_1608 LA_1609   spsE TRUE 0.987 -22.000 0.292 1.000   NA
 291063 291064 LA_1609 LA_1610 spsE NnaC TRUE 0.996 -3.000 0.549 1.000 Y NA
 291064 291065 LA_1610 LA_1611 NnaC gcd1 FALSE 0.347 249.000 0.131 1.000 Y NA
 291065 291066 LA_1611 LA_1612 gcd1   FALSE 0.007 374.000 0.000 NA   NA
 291066 291067 LA_1612 LA_1613   spsE TRUE 0.796 27.000 0.000 NA   NA
 291067 291068 LA_1613 LA_1614 spsE wecE TRUE 0.982 22.000 0.000 0.031 Y NA
 291068 291069 LA_1614 LA_1615 wecE neuA TRUE 0.981 5.000 0.000 1.000 Y NA
 291069 291070 LA_1615 LA_1616 neuA adeH FALSE 0.648 74.000 0.000 1.000 N NA
 291070 291071 LA_1616 LA_1617 adeH moaA TRUE 0.969 1.000 0.000 0.056   NA
 291071 291072 LA_1617 LA_1618 moaA   FALSE 0.014 264.000 0.000 NA   NA
 291072 291073 LA_1618 LA_1619   nodU FALSE 0.019 313.000 0.000 NA N NA
 291073 291074 LA_1619 LA_1620 nodU   FALSE 0.133 115.000 0.000 NA   NA
 291074 291075 LA_1620 LA_1621   nagB FALSE 0.297 161.000 0.019 NA   NA
 291075 291076 LA_1621 LA_1622 nagB wbbJ FALSE 0.221 113.000 0.000 1.000   NA
 291076 291078 LA_1622 LA_1624 wbbJ hpcH FALSE 0.007 613.000 0.000 1.000   NA
 291078 291079 LA_1624 LA_1625 hpcH kdsB TRUE 0.980 35.000 0.059 1.000 N NA
 291079 291080 LA_1625 LA_1626 kdsB   TRUE 0.987 3.000 0.013 1.000   NA
 291080 291081 LA_1626 LA_1627   suhB TRUE 0.988 13.000 0.087 1.000   NA
 291081 291082 LA_1627 LA_1628 suhB   FALSE 0.050 208.000 0.000 1.000   NA
 291082 291083 LA_1628 LA_1629   serA TRUE 0.977 44.000 0.095 0.056   NA
 291083 291084 LA_1629 LA_1630 serA   TRUE 0.986 -7.000 0.095 NA   NA
 291084 291085 LA_1630 LA_1631   gcd1 TRUE 0.871 11.000 0.000 NA   NA
 291085 291086 LA_1631 LA_1632 gcd1 rfbG TRUE 0.996 3.000 0.624 1.000 Y NA
 291086 291087 LA_1632 LA_1633 rfbG   TRUE 0.996 3.000 0.088 1.000 Y NA
 291087 291088 LA_1633 LA_1634   galE3 TRUE 0.994 0.000 0.006 1.000 Y NA
 291088 291089 LA_1634 LA_1635 galE3   TRUE 0.972 8.000 0.000 NA Y NA
 291089 291090 LA_1635 LA_1636     FALSE 0.121 119.000 0.000 NA   NA
 291090 291091 LA_1636 LA_1637     FALSE 0.100 128.000 0.000 NA   NA
 291091 291092 LA_1637 LA_1638     TRUE 0.923 11.000 0.000 1.000   NA
 291092 291093 LA_1638 LA_1639     TRUE 0.939 0.000 0.000 1.000   NA
 291093 291094 LA_1639 LA_1640     TRUE 0.896 -3.000 0.000 NA   NA
 291094 291095 LA_1640 LA_1641     FALSE 0.030 205.000 0.000 NA   NA
 291095 291096 LA_1641 LA_1642     FALSE 0.236 90.000 0.000 NA   NA
 291096 291097 LA_1642 LA_1643     FALSE 0.020 518.000 0.000 0.017   NA
 291097 291098 LA_1643 LA_1644     TRUE 0.989 7.000 0.162 1.000   NA
 291098 291099 LA_1644 LA_1645   wecB TRUE 0.996 4.000 0.477 1.000 Y NA
 291099 291100 LA_1645 LA_1646 wecB   TRUE 0.995 10.000 0.125 1.000 Y NA
 291100 291101 LA_1646 LA_1647   wcaJ TRUE 0.993 4.000 0.015 NA Y NA
 291101 291102 LA_1647 LA_1648 wcaJ   FALSE 0.621 50.000 0.000 NA   NA
 291102 291103 LA_1648 LA_1649   rfbX FALSE 0.009 324.000 0.000 NA   NA
 291103 291104 LA_1649 LA_1650 rfbX hlpA TRUE 0.987 4.000 0.100 NA   NA
 291104 291106 LA_1650 LA_1652 hlpA   FALSE 0.004 701.000 0.000 NA   NA
 291106 291107 LA_1652 LA_1653     FALSE 0.004 641.000 0.000 NA   NA
 291107 291108 LA_1653 LA_1654     FALSE 0.067 150.000 0.000 NA   NA
 291108 291109 LA_1654 LA_1655   wecE TRUE 0.981 14.000 0.024 NA   NA
 291109 291110 LA_1655 LA_1656 wecE   FALSE 0.299 143.000 0.000 NA Y NA
 291110 291111 LA_1656 LA_1657     FALSE 0.005 510.000 0.000 NA   NA
 291111 291112 LA_1657 LA_1658     FALSE 0.004 714.000 0.000 NA   NA
 291112 291113 LA_1658 LA_1659   rfbC FALSE 0.160 196.000 0.000 NA Y NA
 291113 291114 LA_1659 LA_1660 rfbC rfbD TRUE 0.995 4.000 0.033 1.000 Y NA
 291114 291115 LA_1660 LA_1661 rfbD rfbB TRUE 0.997 -3.000 0.033 0.006 Y NA
 291115 291116 LA_1661 LA_1662 rfbB rfbA TRUE 0.998 1.000 0.222 0.007 Y NA
 291116 291117 LA_1662 LA_1663 rfbA   FALSE 0.004 1051.000 0.000 NA   NA
 291117 291118 LA_1663 LA_1664   rfbF2 TRUE 0.985 5.000 0.038 NA   NA
 291120 291121 LA_1666 LA_1667   citT TRUE 0.953 41.000 0.025 NA   NA
 291121 291122 LA_1667 LA_1668 citT   FALSE 0.006 1136.000 0.000 1.000   NA
 291122 291123 LA_1668 LA_1669     TRUE 0.894 1.000 0.000 NA   NA
 291123 291125 LA_1669 LA_1671     FALSE 0.011 299.000 0.000 NA   NA
 291125 291128 LA_1671 LA_1674   capA2 FALSE 0.007 381.000 0.000 NA   NA
 291128 291129 LA_1674 LA_1675 capA2 rpsF TRUE 0.779 65.000 0.002 NA   NA
 291129 291130 LA_1675 LA_1676 rpsF ssb TRUE 0.990 -7.000 0.025 1.000 N NA
 291130 291131 LA_1676 LA_1677 ssb rpsR TRUE 0.988 12.000 0.016 1.000 N NA
 291131 291132 LA_1677 LA_1678 rpsR rplI TRUE 0.997 10.000 0.499 0.017 Y NA
 291132 291133 LA_1678 LA_1679 rplI dnaB TRUE 0.989 18.000 0.100 1.000 N NA
 291133 291134 LA_1679 LA_1680 dnaB aspS TRUE 0.976 33.000 0.003 0.094 N NA
 291134 291135 LA_1680 LA_1681 aspS   FALSE 0.149 110.000 0.000 NA   NA
 291135 291136 LA_1681 LA_1682   phoH TRUE 0.775 31.000 0.000 NA   NA
 291136 291137 LA_1682 LA_1683 phoH   TRUE 0.985 5.000 0.009 1.000   NA
 291137 291138 LA_1683 LA_1684     TRUE 0.888 69.000 0.182 NA   NA
 291138 291139 LA_1684 LA_1685   recO TRUE 0.967 -27.000 0.005 NA   NA
 291139 291140 LA_1685 LA_1686 recO   TRUE 0.963 -16.000 0.002 NA   NA
 291140 291142 LA_1686 LA_1688   argS FALSE 0.006 403.000 0.000 NA   NA
 291142 291143 LA_1688 LA_1689 argS cinA TRUE 0.981 0.000 0.003 1.000   NA
 291143 291144 LA_1689 LA_1690 cinA   TRUE 0.983 -3.000 0.010 NA   NA
 291145 291146 LA_1691 LA_1692     FALSE 0.004 557.000 0.000 NA   NA
 291146 291147 LA_1692 LA_1693   baeS TRUE 0.997 0.000 0.026 0.094 Y NA
 291147 291148 LA_1693 LA_1694 baeS   TRUE 0.984 7.000 1.000 NA   NA
 291148 291149 LA_1694 LA_1695   secG TRUE 0.786 68.000 0.003 NA   NA
 291149 291150 LA_1695 LA_1696 secG tpiA FALSE 0.669 97.000 0.002 1.000 N NA
 291154 291155 LA_1700 LA_1701     FALSE 0.264 86.000 0.000 NA   NA
 291155 291156 LA_1701 LA_1702     FALSE 0.403 85.000 0.000 1.000   NA
 291156 291157 LA_1702 LA_1703   pgk TRUE 0.826 39.000 0.000 1.000   NA
 291157 291158 LA_1703 LA_1704 pgk gapA TRUE 0.996 4.000 0.007 0.003 Y NA
 291163 291164 LA_1709 LA_1710     TRUE 0.931 5.000 0.000 1.000   NA
 291164 291165 LA_1710 LA_1711     TRUE 0.961 -22.000 0.000 0.014   NA
 291165 291166 LA_1711 LA_1712   sipA FALSE 0.085 167.000 0.000 1.000   NA
 291168 291169 LA_1713 LA_1715 paaY   FALSE 0.012 284.000 0.000 NA   NA
 291169 291173 LA_1715 LA_1719   cysK FALSE 0.004 676.000 0.000 NA   NA
 291173 291175 LA_1719 LA_1721 cysK topA FALSE 0.030 1543.000 0.002 1.000 N NA
 291178 291179 LA_1724 LA_1726 modF   TRUE 0.996 -3.000 0.300 0.094 N NA
 291180 291181 LA_1725 LA_1727     TRUE 0.985 11.000 0.667 NA   NA
 291182 291183 LA_1728 LA_1729   panD FALSE 0.636 90.000 0.005 NA   NA
 291183 291184 LA_1729 LA_1730 panD   TRUE 0.957 27.000 0.005 NA   NA
 291185 291187 LA_1731 LA_1733 lipB   FALSE 0.027 429.000 0.003 NA   NA
 291187 291188 LA_1733 LA_1734     TRUE 0.986 7.000 0.600 NA   NA
 291188 291189 LA_1734 LA_1735   mviN TRUE 0.979 4.000 0.006 NA   NA
 291189 291190 LA_1735 LA_1736 mviN   TRUE 0.976 10.000 0.006 NA   NA
 291190 291191 LA_1736 LA_1737     TRUE 0.869 12.000 0.000 NA   NA
 291194 291195 LA_1740 LA_1741     TRUE 0.939 -3.000 0.000 1.000   NA
 291197 291198 LA_1743 LA_1744 cheR cheB TRUE 0.874 74.000 0.039 1.000   NA
 291198 291199 LA_1744 LA_1745 cheB   TRUE 0.991 3.000 0.167 1.000   NA
 291199 291200 LA_1745 LA_1746     TRUE 0.997 14.000 0.167 0.014 Y NA
 291202 291203 LA_1748 LA_1749   tra5 TRUE 0.964 6.000 0.000 0.063   NA
 291206 291207 LA_1752 LA_1753     FALSE 0.004 799.000 0.000 NA   NA
 291210 291211 LA_1756 LA_1757     TRUE 0.781 30.000 0.000 NA   NA
 291211 291212 LA_1757 LA_1758     TRUE 0.896 -3.000 0.000 NA   NA
 291215 291216 LA_1761 LA_1762     FALSE 0.083 139.000 0.000 NA   NA
 291216 291217 LA_1762 LA_1763     FALSE 0.419 70.000 0.000 NA   NA
 291217 291218 LA_1763 LA_1764     FALSE 0.287 84.000 0.000 NA   NA
 291218 291219 LA_1764 LA_1765     FALSE 0.028 208.000 0.000 NA   NA
 291219 291221 LA_1765 LA_1767     TRUE 0.896 0.000 0.000 NA   NA
 291222 291224 LA_1768 LA_1770     FALSE 0.026 373.000 0.000 0.062   NA
 291224 291225 LA_1770 LA_1771     TRUE 0.978 19.000 1.000 NA   NA
 291227 291228 LA_1773 LA_1774     TRUE 0.973 25.000 1.000 NA   NA
 291232 291233 LA_1778 LA_1779     FALSE 0.010 313.000 0.000 NA   NA
 291233 291234 LA_1779 LA_1780   mazE FALSE 0.008 336.000 0.000 NA   NA
 291234 291235 LA_1780 LA_1781 mazE mazF TRUE 0.995 -6.000 0.531 NA Y NA
 291236 291237 LA_1782 LA_1783     TRUE 0.896 0.000 0.000 NA   NA
 291237 291240 LA_1783 LA_1786     FALSE 0.007 392.000 0.000 NA   NA
 291243 291245 LA_1789 LA_1791     FALSE 0.031 204.000 0.000 NA   NA
 291248 291250 LA_1794 LA_1796     FALSE 0.005 507.000 0.000 NA   NA
 291252 291253 LA_1798 LA_1799     TRUE 0.889 3.000 0.000 NA   NA
 291253 291254 LA_1799 LA_1800     FALSE 0.004 591.000 0.000 NA   NA
 291254 291257 LA_1800 LA_1803     FALSE 0.004 653.000 0.000 NA   NA
 291257 10350640 LA_1803 LA_1803a     FALSE 0.006 449.000 0.000 NA   NA
 10350640 291260 LA_1803a LA_1806     FALSE 0.004 726.000 0.000 NA   NA
 291260 291261 LA_1806 LA_1807     FALSE 0.653 47.000 0.000 NA   NA
 291262 10350641 LA_1808 LA_1808a     FALSE 0.008 353.000 0.000 NA   NA
 291265 291266 LA_1811 LA_1812 tra5   TRUE 0.964 6.000 0.000 0.062   NA
 291267 10350642 LA_1813 LA_1813a     FALSE 0.303 83.000 0.000 NA   NA
 10350642 291269 LA_1813a LA_1815     FALSE 0.004 1517.000 0.000 NA   NA
 291269 291271 LA_1815 LA_1816     FALSE 0.114 123.000 0.000 NA   NA
 291271 10350643 LA_1816 LA_1816a     TRUE 0.848 -22.000 0.000 NA   NA
 291275 291277 LA_1821 LA_1823 cysE   FALSE 0.005 474.000 0.000 NA   NA
 291277 291278 LA_1823 LA_1824     FALSE 0.037 189.000 0.000 NA   NA
 291279 291280 LA_1825 LA_1827     FALSE 0.006 454.000 0.000 NA   NA
 291283 291284 LA_1829 LA_1830     TRUE 0.896 -3.000 0.000 NA   NA
 291284 291285 LA_1830 LA_1831     FALSE 0.019 235.000 0.000 NA   NA
 291285 291286 LA_1831 LA_1833     TRUE 0.886 4.000 0.000 NA   NA
 291289 291290 LA_1835 LA_1836     FALSE 0.027 210.000 0.000 NA   NA
 291290 291291 LA_1836 LA_1837   parA FALSE 0.122 146.000 0.000 1.000   NA
 291291 291292 LA_1837 LA_1838 parA spo0J TRUE 0.992 -3.000 0.033 1.000 N NA
 291292 291293 LA_1838 LA_1839 spo0J   FALSE 0.006 415.000 0.000 NA   NA
 291298 291300 LA_1844 LA_1846     FALSE 0.004 590.000 0.000 NA   NA
 291300 291301 LA_1846 LA_1847     TRUE 0.896 -3.000 0.000 NA   NA
 291301 291302 LA_1847 LA_1848     FALSE 0.003 857.000 0.000 NA   NA
 291302 291303 LA_1848 LA_1849     TRUE 0.939 -3.000 0.000 1.000   NA
 291303 291304 LA_1849 LA_1850     FALSE 0.105 127.000 0.000 NA   NA
 291304 291305 LA_1850 LA_1851     FALSE 0.004 558.000 0.000 NA   NA
 291305 291306 LA_1851 LA_1852     FALSE 0.335 79.000 0.000 NA   NA
 291306 291307 LA_1852 LA_1853   phnB FALSE 0.108 126.000 0.000 NA   NA
 291307 291308 LA_1853 LA_1854 phnB   FALSE 0.004 802.000 0.000 NA   NA
 291309 291311 LA_1855 LA_1857 flgG fur FALSE 0.010 1051.000 0.000 1.000 N NA
 291312 291313 LA_1858 LA_1859 arp katE TRUE 0.989 0.000 0.500 NA   NA
 291313 291314 LA_1859 LA_1860 katE   FALSE 0.019 404.000 0.000 1.000 N NA
 291315 291316 LA_1861 LA_1862   spoU FALSE 0.004 791.000 0.000 NA   NA
 291316 291317 LA_1862 LA_1863 spoU cysS TRUE 0.902 90.000 0.088 1.000 Y NA
 291317 291318 LA_1863 LA_1864 cysS axeA TRUE 0.982 -3.000 0.003 NA N NA
 291318 291319 LA_1864 LA_1865 axeA folD TRUE 0.987 16.000 0.081 NA N NA
 291320 291321 LA_1866 LA_1867 asnC   FALSE 0.012 400.000 0.000 1.000   NA
 291321 291322 LA_1867 LA_1868     FALSE 0.004 1277.000 0.000 NA   NA
 291322 291323 LA_1868 LA_1869     TRUE 0.829 -45.000 0.000 NA   NA
 291323 291324 LA_1869 LA_1870     TRUE 0.832 21.000 0.000 NA   NA
 291324 291326 LA_1870 LA_1872     FALSE 0.005 538.000 0.000 NA   NA
 291327 291328 LA_1873 LA_1874     FALSE 0.004 815.000 0.000 NA   NA
 291328 291329 LA_1874 LA_1875   dinG TRUE 0.952 35.000 0.009 NA   NA
 291329 291331 LA_1875 LA_1877 dinG   FALSE 0.541 119.000 0.009 1.000   NA
 291334 291337 LA_1880 LA_1883     FALSE 0.004 2354.000 0.000 NA   NA
 291337 291338 LA_1883 LA_1884     TRUE 0.978 19.000 1.000 NA   NA
 291338 291339 LA_1884 LA_1885     TRUE 0.988 -3.000 0.667 NA   NA
 291340 291341 LA_1886 LA_1887     TRUE 0.982 12.000 0.027 NA   NA
 291341 291342 LA_1887 LA_1888   lepA FALSE 0.266 126.000 0.000 1.000 N NA
 291342 291343 LA_1888 LA_1889 lepA   FALSE 0.025 330.000 0.000 1.000 N NA
 291343 291344 LA_1889 LA_1890   lpxD FALSE 0.006 892.000 0.000 1.000   NA
 291350 291351 LA_1896 LA_1897 sdhB sdhA TRUE 0.998 0.000 0.470 0.001 Y NA
 291351 291352 LA_1897 LA_1898 sdhA   TRUE 0.993 19.000 0.598 0.001   NA
 291353 291354 LA_1899 LA_1900     TRUE 0.984 -10.000 0.051 NA   NA
 291354 10350644 LA_1900 LA_1902     FALSE 0.018 243.000 0.000 NA   NA
 10350644 291358 LA_1902 LA_1904     FALSE 0.009 329.000 0.000 NA   NA
 291358 291359 LA_1904 LA_1905     TRUE 0.871 10.000 0.000 NA   NA
 291359 291360 LA_1905 LA_1906     FALSE 0.274 85.000 0.000 NA   NA
 291362 291364 LA_1908 LA_1910     FALSE 0.003 860.000 0.000 NA   NA
 291364 291365 LA_1910 LA_1911   serA FALSE 0.054 160.000 0.000 NA   NA
 291370 291371 LA_1916 LA_1917     TRUE 0.950 47.000 0.100 NA   NA
 291371 291372 LA_1917 LA_1918     FALSE 0.030 205.000 0.000 NA   NA
 291374 291377 LA_1920 LA_1922 rbpA2   FALSE 0.004 787.000 0.000 NA   NA
 291378 291379 LA_1924 LA_1925   tatC TRUE 0.987 2.000 0.012 NA N NA
 291379 291380 LA_1925 LA_1926 tatC tatA TRUE 0.995 -3.000 0.093 NA Y NA
 291381 291382 LA_1927 LA_1928   trxA TRUE 0.987 6.000 0.143 NA   NA
 291382 291383 LA_1928 LA_1929 trxA cgs1 TRUE 0.988 23.000 0.143 1.000 N NA
 291383 291384 LA_1929 LA_1930 cgs1 caiA TRUE 0.988 18.000 1.000 1.000 N NA
 291384 291385 LA_1930 LA_1931 caiA   TRUE 0.719 40.000 0.000 NA   NA
 291385 291386 LA_1931 LA_1932     FALSE 0.162 106.000 0.000 NA   NA
 291387 291388 LA_1933 LA_1934 tetA2   TRUE 0.951 43.000 0.031 NA   NA
 291388 291389 LA_1934 LA_1935     TRUE 0.933 44.000 0.008 NA   NA
 291389 291390 LA_1935 LA_1936     TRUE 0.894 60.000 0.005 1.000   NA
 291390 291391 LA_1936 LA_1937     FALSE 0.004 1346.000 0.000 NA   NA
 291393 291395 LA_1939 LA_1941     FALSE 0.004 729.000 0.000 NA   NA
 291395 291396 LA_1941 LA_1942     FALSE 0.009 322.000 0.000 NA   NA
 291396 291398 LA_1942 LA_1944     FALSE 0.004 559.000 0.000 NA   NA
 291398 10350646 LA_1944 LA_t13   tRNA-Met-CAT FALSE 0.010 303.000 0.000 NA   NA
 10350646 291399 LA_t13 LA_1945 tRNA-Met-CAT   FALSE 0.537 59.000 0.000 NA   NA
 291399 291400 LA_1945 LA_1946     TRUE 0.984 -16.000 0.667 NA   NA
 291400 291401 LA_1946 LA_1947     TRUE 0.882 5.000 0.000 NA   NA
 291401 291402 LA_1947 LA_1948     TRUE 0.945 17.000 0.000 1.000 N NA
 291402 291403 LA_1948 LA_1949     TRUE 0.879 71.000 0.182 NA   NA
 291403 291404 LA_1949 LA_1950     FALSE 0.131 264.000 0.182 NA   NA
 291405 10350647 LA_1951 LA_1951a eno   FALSE 0.095 305.000 0.020 1.000   NA
 10350647 291407 LA_1951a LA_1953   clpP TRUE 0.986 11.000 0.030 1.000   NA
 291407 291408 LA_1953 LA_1954 clpP   TRUE 0.980 14.000 0.020 NA   NA
 291408 291409 LA_1954 LA_1955     TRUE 0.975 24.000 0.042 NA   NA
 291409 291410 LA_1955 LA_1956     TRUE 0.983 11.000 0.038 NA   NA
 291410 291411 LA_1956 LA_1957     TRUE 0.981 -25.000 0.058 NA   NA
 291411 291412 LA_1957 LA_1958     FALSE 0.196 224.000 0.400 NA   NA
 291412 291413 LA_1958 LA_1959   guaA TRUE 0.991 -3.000 0.091 1.000   NA
 291413 291414 LA_1959 LA_1960 guaA secA FALSE 0.684 111.000 0.015 1.000 N NA
 291414 291415 LA_1960 LA_1961 secA   TRUE 0.816 24.000 0.000 NA   NA
 291415 291416 LA_1961 LA_1962     FALSE 0.185 101.000 0.000 NA   NA
 291416 291417 LA_1962 LA_1963     FALSE 0.426 148.000 0.667 NA   NA
 291417 10350648 LA_1963 LA_1963a     TRUE 0.871 11.000 0.000 NA   NA
 10350648 291418 LA_1963a LA_1964     TRUE 0.876 -7.000 0.000 NA   NA
 291418 291419 LA_1964 LA_1965     TRUE 0.988 2.000 0.136 NA   NA
 291419 291420 LA_1965 LA_1966   czcA2 TRUE 0.987 6.000 0.111 NA   NA
 291420 291421 LA_1966 LA_1967 czcA2 czcA3 FALSE 0.059 535.000 0.000 0.004 Y NA
 291422 291424 LA_1968 LA_1970   pcnB FALSE 0.004 1420.000 0.000 NA   NA
 291424 291425 LA_1970 LA_1971 pcnB   TRUE 0.976 -7.000 0.006 NA   NA
 291425 291426 LA_1971 LA_1972   rnhA FALSE 0.008 346.000 0.000 NA   NA
 291426 291427 LA_1972 LA_1973 rnhA   TRUE 0.985 -3.000 0.020 NA   NA
 291428 291430 LA_1974 LA_1975     FALSE 0.653 61.000 0.000 1.000   NA
 291430 291431 LA_1975 LA_1977     TRUE 0.982 19.000 0.025 1.000   NA
 291431 291432 LA_1977 LA_1978     TRUE 0.894 1.000 0.000 NA   NA
 291432 291433 LA_1978 LA_1979     TRUE 0.841 19.000 0.000 NA   NA
 291433 291434 LA_1979 LA_1980     FALSE 0.007 366.000 0.000 NA   NA
 291435 291436 LA_1981 LA_1982     TRUE 0.886 4.000 0.000 NA   NA
 291436 291437 LA_1982 LA_1984     FALSE 0.145 111.000 0.000 NA   NA
 291440 291441 LA_1986 LA_1987     TRUE 0.976 1.000 0.003 NA   NA
 291441 291442 LA_1987 LA_1988     TRUE 0.982 9.000 0.021 NA   NA
 291445 291446 LA_1991 LA_1992 thiE wecG TRUE 0.937 55.000 0.010 1.000 N NA
 291449 291450 LA_1995 LA_1996 lysS   TRUE 0.986 9.000 0.333 NA   NA
 291450 291451 LA_1996 LA_1997     TRUE 0.946 50.000 0.286 NA   NA
 291451 291452 LA_1997 LA_1998     FALSE 0.027 211.000 0.000 NA   NA
 291452 291453 LA_1998 LA_1999     TRUE 0.832 21.000 0.000 NA   NA
 291453 10350649 LA_1999 LA_t14   tRNA-Leu-GAG FALSE 0.004 701.000 0.000 NA   NA
 10350649 291455 LA_t14 LA_2001 tRNA-Leu-GAG pgsA FALSE 0.573 54.000 0.000 NA   NA
 10350650 291457 LA_t15 LA_2003 tRNA-Asp-GTC   FALSE 0.004 1423.000 0.000 NA   NA
 291457 291458 LA_2003 LA_2004     TRUE 0.896 -3.000 0.000 NA   NA
 291458 10350651 LA_2004 LA_2004a     FALSE 0.008 359.000 0.000 NA   NA
 291460 291461 LA_2006 LA_2007   fliG FALSE 0.013 279.000 0.000 NA   NA
 291461 291462 LA_2007 LA_2008 fliG aceF TRUE 0.986 6.000 0.005 1.000 N NA
 291462 291463 LA_2008 LA_2009 aceF acoB TRUE 0.996 22.000 0.254 0.053 Y NA
 291463 291464 LA_2009 LA_2010 acoB acoA TRUE 0.998 0.000 0.456 0.001 Y NA
 291465 291466 LA_2011 LA_2012     TRUE 0.875 98.000 0.776 1.000 Y NA
 291466 291467 LA_2012 LA_2013     FALSE 0.013 270.000 0.000 NA   NA
 291467 291468 LA_2013 LA_2014   creD TRUE 0.980 -12.000 0.019 NA   NA
 291468 291470 LA_2014 LA_2016 creD   FALSE 0.004 668.000 0.000 NA   NA
 291470 291471 LA_2016 LA_2017   flaB1 FALSE 0.004 788.000 0.000 NA   NA
 291471 291473 LA_2017 LA_2019 flaB1 flaB2 FALSE 0.029 458.000 0.000 0.002   NA
 291473 291474 LA_2019 LA_2020 flaB2   FALSE 0.004 1051.000 0.000 NA   NA
 291476 291477 LA_2022 LA_2023     FALSE 0.264 86.000 0.000 NA   NA
 291477 291478 LA_2023 LA_2024     FALSE 0.004 782.000 0.000 NA   NA
 291479 291480 LA_2025 LA_2026     TRUE 0.977 -31.000 0.030 NA   NA
 291480 291481 LA_2026 LA_2027     TRUE 0.986 -3.000 0.023 NA   NA
 291481 291482 LA_2027 LA_2028     FALSE 0.009 324.000 0.000 NA   NA
 291482 291484 LA_2028 LA_2030     FALSE 0.073 226.000 0.000 0.065   NA
 291484 291485 LA_2030 LA_2031     FALSE 0.274 85.000 0.000 NA   NA
 291486 291488 LA_2032 LA_2035     FALSE 0.004 1695.000 0.000 NA   NA
 291489 291490 LA_2034 LA_2036     FALSE 0.013 275.000 0.000 NA   NA
 291494 291495 LA_2040 LA_2041     TRUE 0.983 -3.000 0.010 NA   NA
 291499 291500 LA_2045 LA_2046 mraW   TRUE 0.970 7.000 0.003 NA   NA
 291500 291501 LA_2046 LA_2047   murE TRUE 0.969 -25.000 0.006 NA   NA
 291501 291502 LA_2047 LA_2048 murE mraY TRUE 0.777 138.000 0.011 0.006 Y NA
 291502 291503 LA_2048 LA_2049 mraY ftsW TRUE 0.991 -3.000 0.003 0.036 N NA
 291503 291504 LA_2049 LA_2050 ftsW murG TRUE 0.993 -3.000 0.058 1.000 N NA
 291504 291505 LA_2050 LA_2051 murG murC TRUE 0.995 3.000 0.036 1.000 Y NA
 291505 291506 LA_2051 LA_2052 murC   FALSE 0.185 101.000 0.000 NA   NA
 291506 291507 LA_2052 LA_2053     TRUE 0.989 -3.000 0.589 NA   NA
 291508 291509 LA_2054 LA_2055 mmsB mce FALSE 0.449 160.000 0.200 NA N NA
 291509 291510 LA_2055 LA_2056 mce ttg2A TRUE 0.989 30.000 0.333 NA Y NA
 291510 291511 LA_2056 LA_2057 ttg2A ttg2B TRUE 0.995 4.000 0.333 NA Y NA
 291511 291512 LA_2057 LA_2059 ttg2B   TRUE 0.989 -3.000 0.167 NA   NA
 291514 291515 LA_2060 LA_2061   metX TRUE 0.988 4.000 0.509 NA   NA
 291515 291516 LA_2061 LA_2062 metX met17 FALSE 0.274 259.000 0.021 1.000 Y NA
 291518 291519 LA_2064 LA_2065     TRUE 0.979 13.000 0.014 NA   NA
 291519 291520 LA_2065 LA_2066     TRUE 0.913 61.000 0.667 NA   NA
 291520 291521 LA_2066 LA_2068   spoVK FALSE 0.512 128.000 0.750 NA   NA
 291525 291526 LA_2071 LA_2072 hflC hflC TRUE 0.997 2.000 0.952 0.065 Y NA
 291526 291527 LA_2072 LA_2073 hflC   TRUE 0.986 32.000 0.034 NA Y NA
 291529 291530 LA_2074 LA_2076   argH TRUE 0.961 27.000 0.003 1.000   NA
 291530 291531 LA_2076 LA_2077 argH   TRUE 0.982 -3.000 0.003 1.000   NA
 291531 291532 LA_2077 LA_2078     TRUE 0.987 -3.000 0.034 NA   NA
 291532 291534 LA_2078 LA_2080     FALSE 0.004 572.000 0.000 NA   NA
 291534 291535 LA_2080 LA_2081   fliM TRUE 0.982 -3.000 0.008 NA   NA
 291538 291539 LA_2084 LA_2085     TRUE 0.978 18.000 0.008 1.000   NA
 10350654 10350655 LA_t16 LA_t17 tRNA-Cys-GCA tRNA-Leu-TAA TRUE 0.836 20.000 0.000 NA   NA
 291544 291545 LA_2090 LA_2091     TRUE 0.977 -13.000 0.011 NA   NA
 291545 291546 LA_2091 LA_2092   gmhA TRUE 0.984 2.000 0.019 NA   NA
 291546 291547 LA_2092 LA_2093 gmhA dppD TRUE 0.988 11.000 0.012 1.000 N NA
 291547 291548 LA_2093 LA_2094 dppD   TRUE 0.978 24.000 0.667 NA   NA
 291548 291549 LA_2094 LA_2095   leuC FALSE 0.282 158.000 0.008 NA   NA
 291549 291550 LA_2095 LA_2096 leuC leuD TRUE 0.997 20.000 0.309 0.001 Y NA
 291550 291551 LA_2096 LA_2097 leuD cysK TRUE 0.993 16.000 0.023 1.000 Y NA
 291551 291552 LA_2097 LA_2098 cysK   TRUE 0.991 -3.000 0.019 1.000 N NA
 10350656 291555 LA_2100a LA_2101   rpoE FALSE 0.573 54.000 0.000 NA   NA
 291555 291556 LA_2101 LA_2102 rpoE   TRUE 0.952 34.000 0.008 NA   NA
 291556 291557 LA_2102 LA_2103   clpS TRUE 0.984 -3.000 0.013 NA   NA
 291557 291558 LA_2103 LA_2104 clpS clpA TRUE 0.981 -39.000 0.596 NA   NA
 291558 291559 LA_2104 LA_2105 clpA ggt TRUE 0.984 14.000 0.004 1.000 N NA
 291559 291560 LA_2105 LA_2106 ggt gshA TRUE 0.991 -3.000 0.018 1.000 N NA
 291560 291561 LA_2106 LA_2107 gshA   TRUE 0.990 -12.000 0.036 1.000 N NA
 291562 291563 LA_2108 LA_2109     TRUE 0.995 -3.000 0.286 0.003   NA
 291563 291564 LA_2109 LA_2110   bolA TRUE 0.988 -3.000 0.011 NA N NA
 291564 291566 LA_2110 LA_2112 bolA bolA FALSE 0.021 1909.000 0.000 NA Y NA
 291566 291567 LA_2112 LA_2113 bolA   TRUE 0.986 4.000 0.011 NA N NA
 291567 291568 LA_2113 LA_2114   ccmA TRUE 0.997 -3.000 0.688 0.088 Y NA
 291568 291569 LA_2114 LA_2115 ccmA lpd TRUE 0.985 19.000 0.013 1.000 N NA
 291569 291570 LA_2115 LA_2116 lpd gloB FALSE 0.470 124.000 0.004 1.000   NA
 291570 291571 LA_2116 LA_2117 gloB   FALSE 0.027 210.000 0.000 NA   NA
 291572 291573 LA_2118 LA_2119   glpK TRUE 0.846 70.000 0.006 1.000   NA
 291574 291575 LA_2120 LA_2121 fliG3   FALSE 0.455 134.000 1.000 NA   NA
 291575 291576 LA_2121 LA_2122     TRUE 0.989 -3.000 0.400 NA   NA
 291576 291577 LA_2122 LA_2123     TRUE 0.989 -3.000 0.400 NA   NA
 291577 291578 LA_2123 LA_2124   dltB FALSE 0.239 197.000 1.000 NA   NA
 291578 291579 LA_2124 LA_2126 dltB sppA TRUE 0.961 36.000 0.006 NA N NA
 291581 291583 LA_2127 LA_2129   ssl2 FALSE 0.010 1006.000 0.000 1.000 N NA
 291583 291584 LA_2129 LA_2130 ssl2   TRUE 0.955 52.000 0.029 1.000 N NA
 291584 291585 LA_2130 LA_2131     TRUE 0.988 4.000 0.500 NA   NA
 291585 291586 LA_2131 LA_2132     TRUE 0.982 -12.000 1.000 NA   NA
 291590 291591 LA_2136 LA_2137     TRUE 0.983 9.000 1.000 NA   NA
 291592 291593 LA_2138 LA_2139 dsbG mdh TRUE 0.980 27.000 0.014 1.000 N NA
 291593 291594 LA_2139 LA_2140 mdh bioF TRUE 0.984 18.000 0.009 1.000 N NA
 291594 291595 LA_2140 LA_2141 bioF bioD TRUE 0.995 0.000 0.020 1.000 Y NA
 291595 291596 LA_2141 LA_2142 bioD bioA TRUE 0.998 -3.000 0.051 0.001 Y NA
 291596 291597 LA_2142 LA_2143 bioA bioB TRUE 0.993 41.000 0.176 0.001 Y NA
 291597 291598 LA_2143 LA_2144 bioB pafAH FALSE 0.013 557.000 0.000 1.000 N NA
 291598 291599 LA_2144 LA_2145 pafAH serB TRUE 0.992 8.000 0.005 1.000 Y NA
 291600 291601 LA_2146 LA_2147 mutS trpF TRUE 0.988 -3.000 0.004 1.000 N NA
 291603 291604 LA_2149 LA_2150     TRUE 0.896 -3.000 0.000 NA   NA
 291605 291606 LA_2151 LA_2152   leuB TRUE 0.988 17.000 0.025 1.000 N NA
 291606 291607 LA_2152 LA_2153 leuB argD TRUE 0.993 17.000 0.025 1.000 Y NA
 291607 291608 LA_2153 LA_2154 argD manB TRUE 0.993 -3.000 0.167 1.000 N NA
 291608 10350657 LA_2154 LA_2154a manB   FALSE 0.114 123.000 0.000 NA   NA
 291609 291610 LA_2155 LA_2156     TRUE 0.989 0.000 0.333 NA   NA
 291611 291614 LA_2157 LA_2160     FALSE 0.004 1469.000 0.000 NA   NA
 291616 291617 LA_2162 LA_2163 rpmB nth TRUE 0.976 -73.000 0.003 1.000 N NA
 291617 291618 LA_2163 LA_2164 nth   TRUE 0.977 7.000 0.002 NA N NA
 291618 291619 LA_2164 LA_2165   prfB TRUE 0.875 7.000 0.000 NA   NA
 291619 291620 LA_2165 LA_2166 prfB uvrC FALSE 0.008 526.000 0.000 1.000   NA
 291620 291621 LA_2166 LA_2167 uvrC   TRUE 0.858 62.000 0.003 1.000   NA
 291621 291622 LA_2167 LA_2168     TRUE 0.987 -3.000 1.000 NA   NA
 291622 291623 LA_2168 LA_2169     TRUE 0.988 -3.000 0.667 NA   NA
 291623 291624 LA_2169 LA_2170     TRUE 0.832 -37.000 0.000 NA   NA
 291627 291628 LA_2173 LA_2174 rfaF1   TRUE 0.989 -3.000 0.419 NA   NA
 291630 291631 LA_2176 LA_2177   faa1 TRUE 0.923 -10.000 0.000 1.000   NA
 291631 291632 LA_2177 LA_2178 faa1 argC TRUE 0.956 6.000 0.000 1.000 N NA
 291632 291633 LA_2178 LA_2179 argC recA FALSE 0.047 251.000 0.000 1.000 N NA
 291633 291634 LA_2179 LA_2180 recA   FALSE 0.024 222.000 0.000 NA   NA
 291636 291637 LA_2182 LA_2183     TRUE 0.966 38.000 0.133 NA   NA
 291637 291638 LA_2183 LA_2184   tldD TRUE 0.903 49.000 0.005 NA   NA
 291638 291639 LA_2184 LA_2185 tldD tldD TRUE 0.989 -3.000 0.114 NA   NA
 291639 291640 LA_2185 LA_2186 tldD   TRUE 0.843 74.000 0.038 NA   NA
 291640 291641 LA_2186 LA_2187   pbpC FALSE 0.246 205.000 0.027 1.000   NA
 291641 291642 LA_2187 LA_2188 pbpC   TRUE 0.925 53.000 0.010 1.000   NA
 291642 291643 LA_2188 LA_2189     TRUE 0.989 2.000 0.431 NA   NA
 291644 291645 LA_2190 LA_2191 apbA   TRUE 0.892 2.000 0.000 NA   NA
 291645 291646 LA_2191 LA_2192     TRUE 0.946 50.000 0.286 NA   NA
 291646 291647 LA_2192 LA_2193   uvrD TRUE 0.984 8.000 0.012 1.000   NA
 291647 291648 LA_2193 LA_2194 uvrD slpA TRUE 0.986 -19.000 0.012 1.000 N NA
 291648 291649 LA_2194 LA_2195 slpA   TRUE 0.790 84.000 0.057 NA   NA
 291649 291650 LA_2195 LA_2196     FALSE 0.015 259.000 0.000 NA   NA
 291650 291651 LA_2196 LA_2197   nemA FALSE 0.010 913.000 0.000 1.000 N NA
 291658 291659 LA_2204 LA_2205     FALSE 0.004 565.000 0.000 NA   NA
 291659 291660 LA_2205 LA_2206     TRUE 0.866 13.000 0.000 NA   NA
 291660 291661 LA_2206 LA_2207     FALSE 0.058 159.000 0.000 NA   NA
 291662 291663 LA_2208 LA_2209   sua5 TRUE 0.976 -19.000 0.012 NA   NA
 291666 291667 LA_2212 LA_2213 uvrA   TRUE 0.970 17.000 0.002 1.000   NA
 291668 291669 LA_2214 LA_2215 czcD motB TRUE 0.992 0.000 0.039 1.000 N NA
 291671 291673 LA_2217 LA_2219 mgtE   FALSE 0.236 209.000 0.286 NA   NA
 291673 291674 LA_2219 LA_2220     FALSE 0.005 501.000 0.000 NA   NA
 291674 291675 LA_2220 LA_2221   mgtA TRUE 0.970 -16.000 0.000 0.001   NA
 291675 291676 LA_2221 LA_2222 mgtA   FALSE 0.021 645.000 0.000 0.063 N NA
 291676 291677 LA_2222 LA_2223     TRUE 0.971 39.000 0.000 0.013 Y NA
 291681 10350658 LA_2227 LA_2227a     TRUE 0.834 -36.000 0.000 NA   NA
 10350658 291682 LA_2227a LA_2228     TRUE 0.828 -46.000 0.000 NA   NA
 291682 291683 LA_2228 LA_2229   rpsU FALSE 0.077 176.000 0.000 1.000   NA
 291683 291684 LA_2229 LA_2230 rpsU   TRUE 0.930 60.000 0.004 0.024   NA
 291684 291685 LA_2230 LA_2231   dnaG TRUE 0.986 19.000 0.137 1.000   NA
 291685 291686 LA_2231 LA_2232 dnaG rpoD TRUE 0.990 17.000 0.299 1.000 N NA
 291691 291692 LA_2237 LA_2238 tyrS   TRUE 0.953 46.000 0.005 1.000 N NA
 291694 291695 LA_2240 LA_2241     FALSE 0.006 450.000 0.000 NA   NA
 291695 291696 LA_2241 LA_2242     TRUE 0.796 27.000 0.000 NA   NA
 291696 291698 LA_2242 LA_2244     FALSE 0.004 1220.000 0.000 NA   NA
 291700 291702 LA_2246 LA_2248     FALSE 0.004 612.000 0.000 NA   NA
 291702 291703 LA_2248 LA_2249     FALSE 0.003 899.000 0.000 NA   NA
 291704 291705 LA_2250 LA_2251     FALSE 0.004 761.000 0.000 NA   NA
 291706 291707 LA_2252 LA_2253 thiJ sir2 TRUE 0.896 -3.000 0.000 NA   NA
 291707 291708 LA_2253 LA_2254 sir2   FALSE 0.033 201.000 0.000 NA   NA
 291709 291710 LA_2255 LA_2256   dltB TRUE 0.983 10.000 1.000 NA   NA
 291710 291711 LA_2256 LA_2258 dltB   TRUE 0.983 4.000 0.015 NA   NA
 291712 291713 LA_2257 LA_2259     FALSE 0.012 287.000 0.000 NA   NA
 291713 291714 LA_2259 LA_2260     TRUE 0.705 89.000 0.017 NA   NA
 291716 291717 LA_2262 LA_2263 adas arp TRUE 0.896 -3.000 0.000 NA   NA
 291717 291718 LA_2263 LA_2264 arp   FALSE 0.287 84.000 0.000 NA   NA
 291719 291720 LA_2265 LA_2266 caiD   FALSE 0.275 192.000 0.667 NA   NA
 291720 291721 LA_2266 LA_2267     TRUE 0.987 7.000 0.222 NA   NA
 291722 291723 LA_2268 LA_2269   nifS TRUE 0.977 -25.000 0.023 NA   NA
 291723 291726 LA_2269 LA_2272 nifS   FALSE 0.005 489.000 0.000 NA   NA
 291726 291727 LA_2272 LA_2273     FALSE 0.111 125.000 0.000 NA   NA
 291729 291730 LA_2275 LA_2276   mcrA FALSE 0.598 52.000 0.000 NA   NA
 291730 291731 LA_2276 LA_2277 mcrA   TRUE 0.896 -3.000 0.000 NA   NA
 291732 291733 LA_2278 LA_2279     TRUE 0.985 -6.000 0.041 NA   NA
 291733 291734 LA_2279 LA_2280   fliS TRUE 0.987 6.000 0.167 NA   NA
 291736 291737 LA_2282 LA_2283 purN purH TRUE 0.996 4.000 0.225 1.000 Y NA
 291737 291738 LA_2283 LA_2284 purH   TRUE 0.975 3.000 0.003 NA   NA
 291738 291739 LA_2284 LA_2285     TRUE 0.967 31.000 1.000 NA   NA
 291739 291740 LA_2285 LA_2286   mipB FALSE 0.216 180.000 0.008 NA   NA
 291740 291741 LA_2286 LA_2287 mipB   FALSE 0.065 152.000 0.000 NA   NA
 291743 291744 LA_2289 LA_2290   dltB TRUE 0.984 14.000 0.667 NA   NA
 291744 291745 LA_2290 LA_2291 dltB rsuA TRUE 0.990 -3.000 0.040 NA N NA
 291746 291747 LA_2292 LA_2293 lipA   TRUE 0.971 -12.000 0.004 NA   NA
 291747 291748 LA_2293 LA_2294     FALSE 0.006 423.000 0.000 NA   NA
 291749 291750 LA_2295 LA_2296 lipL45   FALSE 0.192 100.000 0.000 NA   NA
 291751 291752 LA_2297 LA_2298     FALSE 0.006 870.000 0.000 1.000   NA
 291752 291753 LA_2298 LA_2299     FALSE 0.180 102.000 0.000 NA   NA
 291754 291755 LA_2300 LA_2301     TRUE 0.986 13.000 0.400 NA   NA
 291755 291756 LA_2301 LA_2302     TRUE 0.982 16.000 0.049 NA   NA
 291757 291760 LA_2303 LA_2306 fabG lpxC FALSE 0.025 336.000 0.000 1.000 N NA
 291760 291761 LA_2306 LA_2307 lpxC ptsA TRUE 0.953 46.000 0.005 1.000 N NA
 291762 291763 LA_2308 LA_2309   faa1 TRUE 0.735 94.000 0.667 NA   NA
 291763 291765 LA_2309 LA_2312 faa1 trxA FALSE 0.019 417.000 0.000 1.000 N NA
 291768 291769 LA_2314 LA_2315   cysQ TRUE 0.748 105.000 1.000 1.000 N NA
 291769 291770 LA_2315 LA_2316 cysQ   TRUE 0.973 25.000 1.000 NA   NA
 291770 291771 LA_2316 LA_2317   uvrD FALSE 0.484 63.000 0.000 NA   NA
 291771 291772 LA_2317 LA_2318 uvrD   TRUE 0.959 4.000 0.000 1.000 N NA
 291772 291773 LA_2318 LA_2319   exbD TRUE 0.987 19.000 0.028 1.000 N NA
 291773 291774 LA_2319 LA_2320 exbD tolQ TRUE 0.997 3.000 0.028 0.022 Y NA
 291774 291775 LA_2320 LA_2321 tolQ recN FALSE 0.603 112.000 0.004 1.000 N NA
 291775 291776 LA_2321 LA_2322 recN   FALSE 0.008 359.000 0.000 NA   NA
 291777 291778 LA_2323 LA_2324   fabG TRUE 0.987 -10.000 1.000 1.000   NA
 291778 291779 LA_2324 LA_2325 fabG arsR FALSE 0.399 177.000 1.000 1.000 N NA
 291780 291781 LA_2326 LA_2327 rfaD ubiD TRUE 0.982 15.000 0.009 NA N NA
 291781 291782 LA_2327 LA_2328 ubiD mutY TRUE 0.982 -3.000 0.002 NA N NA
 291782 291783 LA_2328 LA_2329 mutY   TRUE 0.725 82.000 0.000 0.023 N NA
 291783 291784 LA_2329 LA_2330     TRUE 0.892 46.000 0.002 NA   NA
 291784 291785 LA_2330 LA_2331     TRUE 0.875 7.000 0.000 NA   NA
 291786 291789 LA_2332 LA_2335 ubiA ubiX FALSE 0.102 1433.000 0.091 1.000 Y NA
 291790 291791 LA_2336 LA_2337   mrp TRUE 0.938 47.000 0.022 NA   NA
 291791 291792 LA_2337 LA_2338 mrp   TRUE 0.991 2.000 0.022 1.000 N NA
 291792 291793 LA_2338 LA_2339     TRUE 0.986 -3.000 0.027 NA   NA
 291794 291796 LA_2340 LA_2342     FALSE 0.005 502.000 0.000 NA   NA
 291797 291799 LA_2343 LA_2345   hslU FALSE 0.011 1427.000 0.000 1.000 N NA
 291799 291800 LA_2345 LA_2346 hslU hslV TRUE 0.995 10.000 0.752 1.000 Y NA
 291800 291801 LA_2346 LA_2347 hslV xerD TRUE 0.985 -13.000 0.005 1.000 N NA
 291801 291803 LA_2347 LA_2349 xerD pth FALSE 0.161 220.000 0.002 1.000 N NA
 291803 291804 LA_2349 LA_2350 pth leuA TRUE 0.982 -12.000 0.003 1.000 N NA
 291804 291805 LA_2350 LA_2351 leuA mutS2 TRUE 0.896 -3.000 0.000 NA   NA
 291808 291809 LA_2353 LA_2355     TRUE 0.984 7.000 0.043 NA   NA
 291809 291810 LA_2355 LA_2356   xseA TRUE 0.975 4.000 0.004 NA   NA
 291810 291811 LA_2356 LA_2357 xseA xseB TRUE 0.998 2.000 0.412 0.001 Y NA
 291815 291816 LA_2361 LA_2362 tdh   FALSE 0.005 485.000 0.000 NA   NA
 291816 291819 LA_2362 LA_2365     FALSE 0.005 545.000 0.000 NA   NA
 291819 291820 LA_2365 LA_2366     TRUE 0.987 -3.000 1.000 NA   NA
 291820 291821 LA_2366 LA_2367   ftsA2 TRUE 0.984 8.000 0.039 NA   NA
 291821 291822 LA_2367 LA_2368 ftsA2   TRUE 0.995 6.000 0.039 1.000 Y NA
 291822 291823 LA_2368 LA_2369     TRUE 0.823 74.000 0.018 NA   NA
 291823 291824 LA_2369 LA_2370     TRUE 0.981 10.000 0.018 NA   NA
 291824 291825 LA_2370 LA_2371     TRUE 0.979 -25.000 1.000 NA   NA
 291825 291826 LA_2371 LA_2372   gspG TRUE 0.840 70.000 0.014 NA   NA
 291826 291827 LA_2372 LA_2373 gspG gspF TRUE 0.996 22.000 0.599 0.002 Y NA
 291827 291828 LA_2373 LA_2374 gspF gspE TRUE 0.998 6.000 0.119 0.002 Y NA
 291828 291829 LA_2374 LA_2375 gspE gspD TRUE 0.998 4.000 0.149 0.002 Y NA
 291829 291830 LA_2375 LA_2376 gspD gspC TRUE 0.995 5.000 0.065 1.000 Y NA
 291830 291831 LA_2376 LA_2377 gspC nlpD TRUE 0.789 56.000 0.000 1.000 N NA
 291831 291832 LA_2377 LA_2378 nlpD   TRUE 0.843 -25.000 0.000 NA   NA
 291834 291835 LA_2380 LA_2381     FALSE 0.574 96.000 0.004 NA   NA
 291835 291837 LA_2381 LA_2383     FALSE 0.024 716.000 0.010 NA   NA
 291837 291838 LA_2383 LA_2384   flhB1 TRUE 0.989 -3.000 0.154 NA   NA
 291838 291839 LA_2384 LA_2385 flhB1   TRUE 0.989 1.000 0.286 NA   NA
 291839 291840 LA_2385 LA_2386   rnhB TRUE 0.724 74.000 0.002 NA   NA
 291840 291841 LA_2386 LA_2387 rnhB rplS TRUE 0.991 7.000 0.066 1.000 N NA
 291841 291842 LA_2387 LA_2388 rplS trmD TRUE 0.993 -40.000 0.567 1.000 Y NA
 291842 291843 LA_2388 LA_2389 trmD rimM TRUE 0.995 -10.000 0.672 1.000 Y NA
 291843 291844 LA_2389 LA_2390 rimM   TRUE 0.990 -7.000 0.324 1.000   NA
 291844 291845 LA_2390 LA_2391   rpsP TRUE 0.992 0.000 0.385 1.000   NA
 291845 291848 LA_2391 LA_2394 rpsP rpe FALSE 0.011 696.000 0.000 1.000 N NA
 291848 291849 LA_2394 LA_2395 rpe   TRUE 0.989 -3.000 0.026 1.000   NA
 291849 291850 LA_2395 LA_2396   fmt TRUE 0.984 -3.000 0.005 1.000   NA
 291850 291852 LA_2396 LA_2398 fmt priA FALSE 0.648 127.000 0.052 1.000 N NA
 291852 291853 LA_2398 LA_2399 priA   TRUE 0.977 -3.000 0.003 NA   NA
 291853 291854 LA_2399 LA_2400   atoC TRUE 0.980 -7.000 0.012 NA   NA
 291854 291855 LA_2400 LA_2401 atoC   TRUE 0.993 8.000 0.533 0.085   NA
 291855 291856 LA_2401 LA_2402   fruB TRUE 0.983 14.000 0.013 1.000   NA
 291856 291857 LA_2402 LA_2403 fruB hprK TRUE 0.987 -28.000 0.036 1.000 N NA
 291857 291858 LA_2403 LA_2404 hprK rpoN TRUE 0.990 5.000 0.017 1.000 N NA
 291858 291859 LA_2404 LA_2405 rpoN yhbG TRUE 0.990 -3.000 0.059 1.000   NA
 291859 291860 LA_2405 LA_2406 yhbG   TRUE 0.973 31.000 0.543 NA   NA
 291860 291861 LA_2406 LA_2407     TRUE 0.985 -3.000 0.020 NA   NA
 291861 291862 LA_2407 LA_2408   kdsA TRUE 0.974 12.000 0.005 NA   NA
 291862 291863 LA_2408 LA_2409 kdsA pyrG TRUE 0.993 3.000 0.138 1.000 N NA
 291863 291864 LA_2409 LA_2410 pyrG tagD FALSE 0.171 199.000 0.003 1.000   NA
 291864 291865 LA_2410 LA_2411 tagD rfaE TRUE 0.995 1.000 0.032 0.001   NA
 291867 291868 LA_2413 LA_2414 nlpC ptr2 TRUE 0.959 50.000 0.400 NA N NA
 291868 291869 LA_2414 LA_2415 ptr2   TRUE 0.978 -24.000 0.008 1.000   NA
 291873 291874 LA_2419 LA_2420   lytB FALSE 0.077 176.000 0.000 1.000   NA
 291874 291875 LA_2420 LA_2421 lytB   FALSE 0.013 590.000 0.000 1.000 N NA
 291875 291876 LA_2421 LA_2422     TRUE 0.983 -37.000 0.000 0.021 Y NA
 291876 291877 LA_2422 LA_2423     TRUE 0.997 14.000 0.400 0.017 Y NA
 291877 291878 LA_2423 LA_2424     TRUE 0.985 9.000 0.667 NA   NA
 291878 291879 LA_2424 LA_2425   cheA TRUE 0.886 4.000 0.000 NA   NA
 291879 291880 LA_2425 LA_2426 cheA   TRUE 0.991 45.000 0.333 0.010 Y NA
 291880 291881 LA_2426 LA_2427   cheW TRUE 0.997 13.000 0.500 0.010 Y NA
 291881 291882 LA_2427 LA_2428 cheW cheD TRUE 0.996 -3.000 0.079 1.000 Y NA
 291882 291883 LA_2428 LA_2429 cheD cheB TRUE 0.996 -3.000 0.079 1.000 Y NA
 291886 291887 LA_2432 LA_2433 accC1 pccB1 TRUE 0.995 7.000 0.750 1.000 Y NA
 291887 291888 LA_2433 LA_2434 pccB1 spoIIAA TRUE 0.900 77.000 0.667 1.000 N NA
 291888 291889 LA_2434 LA_2435 spoIIAA   TRUE 0.995 -16.000 0.500 1.000 Y NA
 291889 291890 LA_2435 LA_2436     TRUE 0.983 15.000 0.750 NA   NA
 10350661 291891 LA_t19 LA_2437 tRNA-Ala-GGC   FALSE 0.063 155.000 0.000 NA   NA
 291891 291892 LA_2437 LA_2438   def TRUE 0.889 3.000 0.000 NA   NA
 291892 291893 LA_2438 LA_2439 def   TRUE 0.980 20.000 0.012 NA N NA
 291894 10350662 LA_2440 LA_r03   rrs FALSE 0.003 871.000 0.000 NA   NA
 10350662 291897 LA_r03 LA_2443 rrs   FALSE 0.004 1506.000 0.000 NA   NA
 291897 291898 LA_2443 LA_2444     FALSE 0.032 202.000 0.000 NA   NA
 291898 10350663 LA_2444 LA_2444a     FALSE 0.091 133.000 0.000 NA   NA
 10350663 291900 LA_2444a LA_2446     FALSE 0.175 170.000 0.000 0.019   NA
 291900 291901 LA_2446 LA_2447     TRUE 0.833 58.000 0.000 0.019   NA
 291901 291902 LA_2447 LA_2448     TRUE 0.743 71.000 0.000 0.019   NA
 291902 291904 LA_2448 LA_2450     FALSE 0.106 210.000 0.000 0.019   NA
 291904 291906 LA_2450 LA_2452     FALSE 0.106 210.000 0.000 0.019   NA
 291906 291907 LA_2452 LA_2453     FALSE 0.012 402.000 0.000 1.000   NA
 291910 291911 LA_2456 LA_2457   map TRUE 0.871 11.000 0.000 NA   NA
 291911 291912 LA_2457 LA_2458 map   TRUE 0.969 43.000 0.429 1.000   NA
 291912 291913 LA_2458 LA_2459     FALSE 0.011 288.000 0.000 NA   NA
 291914 291915 LA_2460 LA_2461     TRUE 0.753 81.000 0.009 NA   NA
 291915 291916 LA_2461 LA_2462   ccmA TRUE 0.901 60.000 0.024 NA   NA
 291916 291917 LA_2462 LA_2463 ccmA gldF TRUE 0.979 -19.000 0.024 NA   NA
 291917 291918 LA_2463 LA_2464 gldF gldG TRUE 0.987 -3.000 0.039 NA   NA
 291918 291919 LA_2464 LA_2465 gldG   TRUE 0.987 -3.000 1.000 NA   NA
 291919 291920 LA_2465 LA_2466   ste14 FALSE 0.006 431.000 0.000 NA   NA
 291922 291923 LA_2468 LA_2469   CheX TRUE 0.987 0.000 1.000 NA   NA
 291923 291924 LA_2469 LA_2470 CheX   FALSE 0.006 442.000 0.000 NA   NA
 291925 291926 LA_2471 LA_2472     TRUE 0.896 -3.000 0.000 NA   NA
 291927 291929 LA_2473 LA_2474     FALSE 0.016 344.000 0.000 NA N NA
 291931 291932 LA_2477 LA_2478 tfoX   FALSE 0.396 73.000 0.000 NA   NA
 291932 291933 LA_2478 LA_2480   rsbW TRUE 0.980 21.000 0.069 NA   NA
 291933 291937 LA_2480 LA_2483 rsbW xerD FALSE 0.041 494.000 0.003 1.000 N NA
 291938 291940 LA_2484 LA_2486     FALSE 0.511 131.000 0.021 1.000   NA
 291940 291942 LA_2486 LA_2488     FALSE 0.004 591.000 0.000 NA   NA
 291943 291944 LA_2489 LA_2490 dltB   TRUE 0.986 -10.000 0.600 NA   NA
 291946 291947 LA_2492 LA_2493     TRUE 0.838 -31.000 0.000 NA   NA
 291947 291948 LA_2493 LA_2494   trxB FALSE 0.011 1164.000 0.000 1.000 N NA
 291950 291951 LA_2496 LA_2497     TRUE 0.942 51.000 0.500 NA   NA
 291952 291953 LA_2498 LA_2499 ats1   TRUE 0.911 70.000 0.429 NA N NA
 291953 291955 LA_2499 LA_2501   mhpC FALSE 0.008 1645.000 0.000 NA N NA
 291960 291961 LA_2506 LA_2507 hisF gatA TRUE 0.987 -3.000 0.003 1.000 N NA
 291961 291962 LA_2507 LA_2508 gatA gatC TRUE 0.998 -3.000 0.643 0.001 Y NA
 291962 291963 LA_2508 LA_2509 gatC wcaJ TRUE 0.960 27.000 0.002 NA N NA
 291963 291964 LA_2509 LA_2510 wcaJ   TRUE 0.994 3.000 0.051 NA Y NA
 291964 291965 LA_2510 LA_2511   bacA TRUE 0.980 24.000 0.026 NA N NA
 291965 291966 LA_2511 LA_2512 bacA lipL31 TRUE 0.984 7.000 0.039 NA   NA
 291966 291967 LA_2512 LA_2513 lipL31 mfd TRUE 0.900 47.000 0.003 NA   NA
 291967 291968 LA_2513 LA_2514 mfd panC TRUE 0.987 -3.000 0.003 1.000 N NA
 291968 291969 LA_2514 LA_2515 panC hisD TRUE 0.969 31.000 0.003 1.000 N NA
 291970 291972 LA_2516 LA_2518 xthA   FALSE 0.040 1424.000 0.000 0.056 Y NA
 291983 291984 LA_2529 LA_2530     TRUE 0.934 53.000 0.095 NA   NA
 291984 291985 LA_2530 LA_2531     TRUE 0.984 15.000 0.095 NA   NA
 291986 291987 LA_2532 LA_2533     TRUE 0.985 23.000 0.000 0.003 Y NA
 291987 291989 LA_2533 LA_2535   ppiB FALSE 0.012 1806.000 0.000 1.000 N NA
 291990 291991 LA_2536 LA_2537 cyaA8   TRUE 0.985 -16.000 1.000 1.000   NA
 291991 291992 LA_2537 LA_2538     TRUE 0.983 -10.000 1.000 NA   NA
 291993 291994 LA_2539 LA_2540 uup   TRUE 0.964 43.000 0.006 0.084   NA
 291999 292000 LA_2545 LA_2546   capC TRUE 0.988 -3.000 0.733 NA   NA
 292000 292001 LA_2546 LA_2547 capC capB TRUE 0.994 -12.000 0.182 0.001   NA
 292001 292002 LA_2547 LA_2548 capB   TRUE 0.937 2.000 0.000 1.000   NA
 292002 292003 LA_2548 LA_2549   baeS TRUE 0.929 61.000 0.000 0.016 Y NA
 292003 292004 LA_2549 LA_2550 baeS fkpA FALSE 0.245 109.000 0.000 1.000   NA
 292004 292005 LA_2550 LA_2551 fkpA   TRUE 0.988 -3.000 0.015 1.000   NA
 292006 292009 LA_2552 LA_2554     FALSE 0.012 285.000 0.000 NA   NA
 292009 292010 LA_2554 LA_2556     FALSE 0.009 484.000 0.000 1.000   NA
 292010 292011 LA_2556 LA_2557     FALSE 0.196 99.000 0.000 NA   NA
 292012 292013 LA_2558 LA_2559 clpX clpP TRUE 0.995 11.000 0.352 1.000 Y NA
 292013 292014 LA_2559 LA_2560 clpP tig TRUE 0.996 -3.000 0.351 1.000 Y NA
 292014 10350664 LA_2560 LA_t20 tig tRNA-Gly-GCC TRUE 0.751 35.000 0.000 NA   NA
 10350664 292015 LA_t20 LA_2562 tRNA-Gly-GCC tesA FALSE 0.484 63.000 0.000 NA   NA
 292016 292017 LA_2561 LA_2563 bglX hemN TRUE 0.986 -3.000 0.002 1.000 N NA
 292017 292019 LA_2563 LA_2565 hemN   FALSE 0.004 649.000 0.000 NA   NA
 292023 292024 LA_2569 LA_2570 ilvH ilvB TRUE 0.997 -3.000 0.015 0.001 Y NA
 292026 292028 LA_2572 LA_2574 pilF tlpA FALSE 0.013 549.000 0.000 1.000 N NA
 292028 292029 LA_2574 LA_2575 tlpA   FALSE 0.321 81.000 0.000 NA   NA
 292031 292032 LA_2577 LA_2578 aarF feoA TRUE 0.988 -3.000 0.054 NA   NA
 292032 292033 LA_2578 LA_2579 feoA feoB TRUE 0.984 -13.000 0.019 1.000   NA
 292033 292034 LA_2579 LA_2580 feoB   TRUE 0.989 12.000 0.019 1.000 N NA
 292034 292035 LA_2580 LA_2581   spsE TRUE 0.995 16.000 0.250 1.000 Y NA
 292035 292036 LA_2581 LA_2582 spsE nlpD TRUE 0.927 -7.000 0.000 1.000   NA
 10350665 292041 LA_2585 LA_2587     FALSE 0.010 310.000 0.000 NA   NA
 292042 292043 LA_2588 LA_2589   fliH TRUE 0.875 7.000 0.000 NA   NA
 292043 292044 LA_2589 LA_2590 fliH fliG TRUE 0.997 4.000 0.014 0.004 Y NA
 292044 292045 LA_2590 LA_2591 fliG fliF TRUE 0.997 -3.000 0.008 0.006 Y NA
 292046 292047 LA_2592 LA_2593 fliI   TRUE 0.995 4.000 0.241 0.010   NA
 292047 292048 LA_2593 LA_2594   flaB5 FALSE 0.312 159.000 0.016 NA   NA
 292048 292049 LA_2594 LA_2595 flaB5   TRUE 0.985 13.000 0.143 NA   NA
 292049 292050 LA_2595 LA_2596     FALSE 0.641 48.000 0.000 NA   NA
 292052 292053 LA_2598 LA_2599 gmk   FALSE 0.106 291.000 0.143 NA   NA
 292053 292054 LA_2599 LA_2600     TRUE 0.985 0.000 0.018 NA   NA
 292054 292055 LA_2600 LA_2601     TRUE 0.952 46.000 0.667 NA   NA
 292055 292056 LA_2601 LA_2602     TRUE 0.985 9.000 0.087 NA   NA
 292056 292057 LA_2602 LA_2603   fliA TRUE 0.984 26.000 0.050 1.000 N NA
 292057 292058 LA_2603 LA_2604 fliA   FALSE 0.436 128.000 0.012 NA   NA
 292058 292059 LA_2604 LA_2605     TRUE 0.983 4.000 0.018 NA   NA
 292059 292060 LA_2605 LA_2606   flhF TRUE 0.985 28.000 0.382 1.000 N NA
 292060 292061 LA_2606 LA_2607 flhF flhA TRUE 0.978 53.000 0.440 1.000 Y NA
 292061 292062 LA_2607 LA_2608 flhA flhB TRUE 0.997 10.000 0.207 0.004 Y NA
 292062 292063 LA_2608 LA_2609 flhB fliR TRUE 0.996 -3.000 0.218 1.000 Y NA
 292063 292064 LA_2609 LA_2610 fliR fliQ TRUE 0.998 7.000 0.185 0.002 Y NA
 292064 292065 LA_2610 LA_2611 fliQ fliP TRUE 0.998 -3.000 0.049 0.004 Y NA
 292065 292066 LA_2611 LA_2612 fliP   TRUE 0.797 81.000 0.008 1.000   NA
 292066 292067 LA_2612 LA_2613   fliY TRUE 0.987 -3.000 0.010 1.000   NA
 292067 292069 LA_2613 LA_2615 fliY   FALSE 0.004 568.000 0.000 NA   NA
 292069 292070 LA_2615 LA_2616   alsT FALSE 0.007 364.000 0.000 NA   NA
 292074 292075 LA_2620 LA_2621 erg3 dltE TRUE 0.875 7.000 0.000 NA   NA
 292077 292078 LA_2623 LA_2624 gst   TRUE 0.843 74.000 0.038 NA   NA
 292080 292081 LA_2626 LA_2627     FALSE 0.021 226.000 0.000 NA   NA
 292085 292086 LA_2631 LA_2632 clpS tktC2 FALSE 0.572 119.000 0.071 NA   NA
 292086 292087 LA_2632 LA_2633 tktC2 metK TRUE 0.985 8.000 0.004 1.000 N NA
 292088 292091 LA_2634 LA_2637   lipL32 FALSE 0.019 232.000 0.000 NA   NA
 292091 292093 LA_2637 LA_2639 lipL32 caiA FALSE 0.004 1447.000 0.000 NA   NA
 292093 292094 LA_2639 LA_2640 caiA   FALSE 0.436 68.000 0.000 NA   NA
 292094 10350666 LA_2640 LA_2640a     FALSE 0.009 335.000 0.000 NA   NA
 10350666 292095 LA_2640a LA_2641     FALSE 0.031 204.000 0.000 NA   NA
 292095 292096 LA_2641 LA_2642     FALSE 0.287 84.000 0.000 NA   NA
 292099 292102 LA_2645 LA_2648     FALSE 0.004 805.000 0.000 NA   NA
 292102 292103 LA_2648 LA_2649     FALSE 0.011 290.000 0.000 NA   NA
 292105 292106 LA_2651 LA_2652   tra5 TRUE 0.964 6.000 0.000 0.056   NA
 292106 292108 LA_2652 LA_2654 tra5 groES FALSE 0.012 2114.000 0.000 1.000 N NA
 292108 292109 LA_2654 LA_2655 groES groEL TRUE 0.996 15.000 0.028 0.006 Y NA
 292109 292110 LA_2655 LA_2656 groEL   FALSE 0.174 104.000 0.000 NA   NA
 292110 292113 LA_2656 LA_2659     FALSE 0.004 1107.000 0.000 NA   NA
 292113 292114 LA_2659 LA_2660     TRUE 0.989 -13.000 0.333 1.000   NA
 292114 292115 LA_2660 LA_2661     TRUE 0.992 -24.000 0.333 0.009   NA
 292115 292116 LA_2661 LA_2662     TRUE 0.983 4.000 0.006 1.000   NA
 292117 292118 LA_2663 LA_2664   flgI TRUE 0.987 -3.000 0.045 NA   NA
 292118 292119 LA_2664 LA_2665 flgI flgH TRUE 0.998 -3.000 0.235 0.010 Y NA
 292119 292120 LA_2665 LA_2666 flgH flgA TRUE 0.988 -3.000 0.085 NA   NA
 292120 292121 LA_2666 LA_2667 flgA flgG TRUE 0.983 19.000 0.319 NA   NA
 292121 292122 LA_2667 LA_2668 flgG   FALSE 0.007 729.000 0.000 1.000   NA
 292122 292125 LA_2668 LA_2671     FALSE 0.004 1988.000 0.000 NA   NA
 292126 292128 LA_2672 LA_2674   abgB FALSE 0.004 1108.000 0.000 NA   NA
 292130 292132 LA_2676 LA_2678     FALSE 0.003 867.000 0.000 NA   NA
 292133 292134 LA_2679 LA_2680   tra5 TRUE 0.964 6.000 0.000 0.055   NA
 292135 292136 LA_2681 LA_2682     TRUE 0.726 39.000 0.000 NA   NA
 292136 292137 LA_2682 LA_2683     FALSE 0.006 456.000 0.000 NA   NA
 292137 292138 LA_2683 LA_2684     FALSE 0.264 86.000 0.000 NA   NA
 292138 292139 LA_2684 LA_2685     FALSE 0.443 67.000 0.000 NA   NA
 292139 292140 LA_2685 LA_2686     FALSE 0.679 45.000 0.000 NA   NA
 292140 292141 LA_2686 LA_2687   pepP FALSE 0.008 352.000 0.000 NA   NA
 292141 292142 LA_2687 LA_2688 pepP rfaF TRUE 0.991 -3.000 0.018 1.000 N NA
 292142 292143 LA_2688 LA_2689 rfaF thl TRUE 0.990 14.000 0.075 1.000 N NA
 292144 292145 LA_2690 LA_2691 bfr   TRUE 0.989 -3.000 0.006 1.000 N NA
 292145 292146 LA_2691 LA_2692     TRUE 0.979 16.000 0.006 1.000   NA
 292152 292153 LA_2698 LA_2699     TRUE 0.928 13.000 0.000 NA N NA
 292153 292154 LA_2699 LA_2701   kamA TRUE 0.992 -7.000 0.300 1.000 N NA
 292156 292157 LA_2702 LA_2703     TRUE 0.951 44.000 0.040 NA   NA
 292157 292158 LA_2703 LA_2704     FALSE 0.135 114.000 0.000 NA   NA
 292159 292160 LA_2705 LA_2706   thiH FALSE 0.003 860.000 0.000 NA   NA
 292160 292163 LA_2706 LA_2709 thiH   FALSE 0.011 1472.000 0.000 1.000 N NA
 292163 292165 LA_2709 LA_2711     FALSE 0.021 227.000 0.000 NA   NA
 292167 292169 LA_2713 LA_2715     FALSE 0.005 548.000 0.000 NA   NA
 292169 292171 LA_2715 LA_2717     FALSE 0.041 629.000 0.000 0.082 Y NA
 292171 292172 LA_2717 LA_2718     FALSE 0.005 537.000 0.000 NA   NA
 292172 292173 LA_2718 LA_2719     TRUE 0.984 -3.000 0.013 NA   NA
 292173 292174 LA_2719 LA_2720     FALSE 0.313 82.000 0.000 NA   NA
 292174 292176 LA_2720 LA_2722     FALSE 0.004 676.000 0.000 NA   NA
 292176 292177 LA_2722 LA_2723     FALSE 0.149 110.000 0.000 NA   NA
 292181 292182 LA_2726 LA_2728     FALSE 0.009 333.000 0.000 NA   NA
 292183 292184 LA_2729 LA_2730     FALSE 0.003 1004.000 0.000 NA   NA
 292184 292185 LA_2730 LA_2731     FALSE 0.039 184.000 0.000 NA   NA
 292185 292187 LA_2731 LA_2733   prfC FALSE 0.004 1135.000 0.000 NA   NA
 292187 292189 LA_2733 LA_2735 prfC accB FALSE 0.005 552.000 0.000 NA   NA
 292189 292190 LA_2735 LA_2736 accB accC2 TRUE 0.896 -3.000 0.000 NA   NA
 292190 292191 LA_2736 LA_2737 accC2   TRUE 0.996 -3.000 0.008 0.048 Y NA
 29219