MicrobesOnline Operon Predictions for Colwellia psychrerythraea 34H

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 837809 837810 CPS_0001 CPS_0002 dnaA dnaN TRUE 0.982 39.000 0.328 1.000 Y NA
 837810 837811 CPS_0002 CPS_0003 dnaN recF TRUE 0.983 36.000 0.318 1.000 Y NA
 837811 837812 CPS_0003 CPS_0004 recF gyrB TRUE 0.995 10.000 0.249 0.005 Y NA
 837812 837813 CPS_0004 CPS_0005 gyrB glyQ FALSE 0.190 166.000 0.004 1.000 N NA
 837813 837814 CPS_0005 CPS_0006 glyQ glyS TRUE 0.999 0.000 0.651 0.001 Y NA
 837814 837815 CPS_0006 CPS_0007 glyS   FALSE 0.021 460.000 0.000 1.000   NA
 837815 837816 CPS_0007 CPS_0008     TRUE 0.733 33.000 0.043 NA   NA
 837817 837818 CPS_0009 CPS_0010 lepB1 sirA FALSE 0.266 98.000 0.000 1.000 N NA
 837821 837822 CPS_0013 CPS_0014 pepQ   TRUE 0.526 186.000 0.127 1.000   NA
 837822 837823 CPS_0014 CPS_0015   trkH TRUE 0.953 25.000 0.202 1.000   NA
 837824 837825 CPS_0016 CPS_0017   trkA FALSE 0.041 363.000 0.000 1.000   NA
 837825 837826 CPS_0017 CPS_0018 trkA sun TRUE 0.905 30.000 0.122 1.000 N NA
 837826 837827 CPS_0018 CPS_0019 sun fmt TRUE 0.996 9.000 0.305 1.000 Y NA
 837827 837828 CPS_0019 CPS_0020 fmt def1 TRUE 0.944 33.000 0.105 0.022 Y NA
 837829 837830 CPS_0021 CPS_0022     TRUE 0.477 84.000 0.048 1.000   NA
 837830 837831 CPS_0022 CPS_0023   smg TRUE 0.929 20.000 0.124 NA   NA
 837831 837832 CPS_0023 CPS_0024 smg   TRUE 0.822 120.000 0.331 NA   NA
 837833 837834 CPS_0025 CPS_0026 purK purE TRUE 0.990 9.000 0.136 0.001 Y NA
 837837 837838 CPS_0029 CPS_0030   aroE FALSE 0.206 124.000 0.000 1.000 N NA
 837838 837839 CPS_0030 CPS_0031 aroE   TRUE 0.918 15.000 0.078 NA   NA
 837840 837841 CPS_0032 CPS_0033     FALSE 0.010 680.000 0.000 NA   NA
 837842 837843 CPS_0034 CPS_0035 rrsA   FALSE 0.199 98.000 0.000 NA   NA
 837843 837844 CPS_0035 CPS_0036     FALSE 0.160 113.000 0.000 NA   NA
 837844 837845 CPS_0036 CPS_0037   rrlA FALSE 0.102 249.000 0.000 NA   NA
 837845 837846 CPS_0037 CPS_0038 rrlA rrfA FALSE 0.143 160.000 0.000 NA   NA
 837846 837847 CPS_0038 CPS_0039 rrfA   FALSE 0.172 106.000 0.000 NA   NA
 837847 837848 CPS_0039 CPS_0040     FALSE 0.146 138.000 0.000 NA   NA
 837850 837851 CPS_0042 CPS_0043   rrsB FALSE 0.010 698.000 0.000 NA   NA
 837851 837852 CPS_0043 CPS_0044 rrsB   FALSE 0.188 101.000 0.000 NA   NA
 837852 837853 CPS_0044 CPS_0045     FALSE 0.205 96.000 0.000 NA   NA
 837853 837854 CPS_0045 CPS_0046   rrlB FALSE 0.146 138.000 0.000 NA   NA
 837856 837857 CPS_0048 CPS_0049 rrfB rrsC FALSE 0.016 539.000 0.000 NA   NA
 837857 837858 CPS_0049 CPS_0050 rrsC   FALSE 0.188 101.000 0.000 NA   NA
 837858 837859 CPS_0050 CPS_0051     FALSE 0.205 96.000 0.000 NA   NA
 837859 837860 CPS_0051 CPS_0052   rrlC FALSE 0.102 249.000 0.000 NA   NA
 837862 837863 CPS_0054 CPS_0055 5S rRNA atpI FALSE 0.009 885.000 0.000 NA   NA
 837863 837864 CPS_0055 CPS_0056 atpI atpB TRUE 0.975 44.000 0.291 1.000 Y NA
 837864 837865 CPS_0056 CPS_0057 atpB atpE TRUE 0.970 99.000 0.557 0.003 Y NA
 837865 837866 CPS_0057 CPS_0058 atpE atpF TRUE 0.992 48.000 0.666 0.003 Y NA
 837866 837867 CPS_0058 CPS_0059 atpF atpH TRUE 0.992 13.000 0.242 0.003 Y NA
 837867 837868 CPS_0059 CPS_0060 atpH atpA TRUE 0.999 16.000 0.864 0.003 Y NA
 837868 837869 CPS_0060 CPS_0061 atpA atpG TRUE 0.997 38.000 0.846 0.003 Y NA
 837869 837870 CPS_0061 CPS_0062 atpG atpD TRUE 0.981 101.000 0.724 0.003 Y NA
 837870 837871 CPS_0062 CPS_0063 atpD atpC TRUE 0.994 62.000 0.837 0.003 Y NA
 837872 837873 CPS_0064 CPS_0065     TRUE 0.891 5.000 0.000 NA N NA
 837873 837874 CPS_0065 CPS_0066     TRUE 0.986 0.000 0.186 NA   NA
 837874 837875 CPS_0066 CPS_0067     TRUE 0.830 63.000 0.171 NA   NA
 837876 837877 CPS_0068 CPS_0069     FALSE 0.047 350.000 0.000 NA   NA
 837877 837878 CPS_0069 CPS_0070     FALSE 0.411 49.000 0.000 NA   NA
 837879 837880 CPS_0071 CPS_0072 hemY hemX TRUE 0.999 -3.000 0.765 1.000 Y NA
 837880 837881 CPS_0072 CPS_0073 hemX hemD TRUE 0.996 24.000 0.600 1.000 Y NA
 837881 837882 CPS_0073 CPS_0074 hemD hemC TRUE 0.938 65.000 0.205 0.002 Y NA
 837882 837883 CPS_0074 CPS_0075 hemC cyaY TRUE 0.699 25.000 0.003 NA N NA
 837884 837885 CPS_0076 CPS_0077   dapF TRUE 0.867 0.000 0.000 NA   NA
 837885 837886 CPS_0077 CPS_0078 dapF   TRUE 0.840 61.000 0.175 NA   NA
 837886 837887 CPS_0078 CPS_0079     TRUE 0.705 25.000 0.018 NA   NA
 837887 837888 CPS_0079 CPS_0080   uvrD TRUE 0.541 160.000 0.128 1.000   NA
 837888 837889 CPS_0080 CPS_0081 uvrD   TRUE 0.430 93.000 0.033 1.000 N NA
 837891 837892 CPS_0083 CPS_0084 recQ   FALSE 0.073 292.000 0.000 NA   NA
 837893 837894 CPS_0085 CPS_0086     FALSE 0.143 157.000 0.000 NA   NA
 837894 837895 CPS_0086 CPS_0087     FALSE 0.135 198.000 0.000 NA   NA
 837895 837896 CPS_0087 CPS_0088     FALSE 0.140 182.000 0.000 NA   NA
 837896 837897 CPS_0088 CPS_0089     TRUE 0.838 56.000 0.161 NA   NA
 837897 837898 CPS_0089 CPS_0090     TRUE 0.776 65.000 0.129 NA   NA
 837900 837901 CPS_0092 CPS_0093     TRUE 0.929 -13.000 0.071 1.000   NA
 837901 837902 CPS_0093 CPS_0094     FALSE 0.071 295.000 0.000 NA   NA
 837902 837903 CPS_0094 CPS_0095     FALSE 0.194 372.000 0.000 NA Y NA
 837903 837904 CPS_0095 CPS_0096     TRUE 0.427 57.000 0.000 0.040 N NA
 837904 837905 CPS_0096 CPS_0097     FALSE 0.357 58.000 0.000 NA   NA
 837905 837906 CPS_0097 CPS_0098   mmsA1 FALSE 0.184 102.000 0.000 NA   NA
 837906 837907 CPS_0098 CPS_0099 mmsA1   TRUE 0.764 43.000 0.059 1.000 N NA
 837908 837909 CPS_0100 CPS_0101     TRUE 0.594 27.000 0.000 NA   NA
 837912 837913 CPS_0104 CPS_0105     FALSE 0.399 51.000 0.000 NA   NA
 837913 837914 CPS_0105 CPS_0106     FALSE 0.155 119.000 0.000 NA   NA
 837914 837915 CPS_0106 CPS_0107     FALSE 0.145 149.000 0.000 NA   NA
 837915 837916 CPS_0107 CPS_0108     FALSE 0.160 113.000 0.000 NA   NA
 837916 837917 CPS_0108 CPS_0109     FALSE 0.047 351.000 0.000 NA   NA
 837917 837918 CPS_0109 CPS_0110     TRUE 0.997 -3.000 0.600 NA   NA
 837918 837919 CPS_0110 CPS_0111     FALSE 0.388 53.000 0.000 NA   NA
 837920 837921 CPS_0112 CPS_0113 rph pyrE TRUE 0.899 29.000 0.108 1.000 N NA
 837921 837922 CPS_0113 CPS_0114 pyrE   FALSE 0.020 581.000 0.000 NA N NA
 837922 837923 CPS_0114 CPS_0115     FALSE 0.175 105.000 0.000 NA   NA
 837924 837925 CPS_0116 CPS_0117   kdkA TRUE 0.857 3.000 0.000 NA   NA
 837925 837926 CPS_0117 CPS_0118 kdkA kdtA TRUE 0.895 -3.000 0.000 1.000 N NA
 837926 837927 CPS_0118 CPS_0119 kdtA   FALSE 0.252 101.000 0.000 1.000 N NA
 837928 837929 CPS_0120 CPS_0121 kbl tdh TRUE 0.987 32.000 0.547 1.000 N NA
 837929 837930 CPS_0121 CPS_0122 tdh glpE TRUE 0.488 158.000 0.089 1.000 N NA
 837930 837931 CPS_0122 CPS_0123 glpE   TRUE 0.976 31.000 0.405 1.000   NA
 837933 837934 CPS_0125 CPS_0126   ubiA TRUE 0.974 38.000 0.248 NA Y NA
 837935 837936 CPS_0127 CPS_0128     TRUE 0.698 59.000 0.080 NA   NA
 837937 837938 CPS_0129 CPS_0130     TRUE 0.611 129.000 0.038 NA Y NA
 837938 837939 CPS_0130 CPS_0131     TRUE 1.000 0.000 0.827 NA Y NA
 837940 837941 CPS_0132 CPS_0133   plsB FALSE 0.039 374.000 0.000 NA   NA
 837943 837944 CPS_0135 CPS_0136     FALSE 0.143 160.000 0.000 NA   NA
 837944 837945 CPS_0136 CPS_0137     FALSE 0.373 55.000 0.000 NA   NA
 837946 837947 CPS_0138 CPS_0139     FALSE 0.193 104.000 0.009 NA   NA
 837947 837948 CPS_0139 CPS_0140     TRUE 0.733 -34.000 0.000 NA   NA
 837948 837949 CPS_0140 CPS_0141     TRUE 0.722 -58.000 0.000 NA   NA
 837949 837950 CPS_0141 CPS_0142   ftnA FALSE 0.164 215.000 0.000 0.039 N NA
 837951 837952 CPS_0143 CPS_0144     TRUE 0.835 6.000 0.000 1.000   NA
 837953 837954 CPS_0145 CPS_0146     FALSE 0.157 117.000 0.000 NA   NA
 837955 837956 CPS_0147 CPS_0148     FALSE 0.014 555.000 0.000 1.000   NA
 837956 837957 CPS_0148 CPS_0149     FALSE 0.377 53.000 0.000 1.000   NA
 837957 837958 CPS_0149 CPS_0150     FALSE 0.219 92.000 0.000 NA   NA
 837959 837960 CPS_0151 CPS_0152     FALSE 0.143 163.000 0.000 NA   NA
 837960 837961 CPS_0152 CPS_0153     FALSE 0.040 372.000 0.000 NA   NA
 837961 837962 CPS_0153 CPS_0154     FALSE 0.268 79.000 0.000 NA   NA
 837963 837964 CPS_0155 CPS_0156     TRUE 0.860 33.000 0.000 1.000 Y NA
 837967 837968 CPS_0159 CPS_0160 ftsE   TRUE 0.984 -16.000 0.121 NA Y NA
 837968 837969 CPS_0160 CPS_0161   rpoH FALSE 0.177 335.000 0.051 NA N NA
 837969 837970 CPS_0161 CPS_0162 rpoH   FALSE 0.130 262.000 0.000 1.000 N NA
 837970 837971 CPS_0162 CPS_0163   tatA1 FALSE 0.127 264.000 0.000 1.000 N NA
 837971 837972 CPS_0163 CPS_0164 tatA1 tatB1 TRUE 0.968 4.000 0.000 0.009 Y NA
 837972 837973 CPS_0164 CPS_0165 tatB1 tatC1 TRUE 0.997 -3.000 0.333 NA Y NA
 837973 837974 CPS_0165 CPS_0166 tatC1   TRUE 0.910 -3.000 0.025 NA   NA
 837974 837975 CPS_0166 CPS_0167   tatD TRUE 0.786 28.000 0.045 NA   NA
 837975 837976 CPS_0167 CPS_0168 tatD   TRUE 0.779 76.000 0.134 NA N NA
 837976 837977 CPS_0168 CPS_0169   hemB TRUE 0.909 13.000 0.038 1.000 N NA
 837979 837980 CPS_0171 CPS_0172     TRUE 0.800 -10.000 0.000 NA   NA
 837981 837982 CPS_0173 CPS_0174   rhlB TRUE 0.980 31.000 0.406 NA N NA
 837983 837984 CPS_0175 CPS_0176 trx1 rho FALSE 0.354 241.000 0.087 1.000   NA
 837984 837985 CPS_0176 CPS_0177 rho ubiD TRUE 0.470 78.000 0.025 NA N NA
 837985 837986 CPS_0177 CPS_0178 ubiD   TRUE 0.596 209.000 0.045 NA Y NA
 837987 837988 CPS_0179 CPS_0180   pepD FALSE 0.019 573.000 0.000 1.000 N NA
 837988 837989 CPS_0180 CPS_0181 pepD   FALSE 0.031 464.000 0.000 1.000 N NA
 837989 837990 CPS_0181 CPS_0182   coaBC FALSE 0.411 79.000 0.016 1.000 N NA
 837991 837992 CPS_0183 CPS_0184     FALSE 0.154 114.000 0.000 1.000   NA
 837992 837993 CPS_0184 CPS_0185     TRUE 0.997 16.000 0.864 0.007   NA
 837993 837994 CPS_0185 CPS_0186     TRUE 0.998 -7.000 0.727 NA   NA
 837994 837995 CPS_0186 CPS_0187     TRUE 0.829 -7.000 0.000 NA   NA
 837995 837996 CPS_0187 CPS_0188     TRUE 0.867 0.000 0.000 NA   NA
 837996 837997 CPS_0188 CPS_0189     FALSE 0.230 89.000 0.000 NA   NA
 837998 837999 CPS_0190 CPS_0191     FALSE 0.008 1805.000 0.000 NA   NA
 837999 838000 CPS_0191 CPS_0192     FALSE 0.379 54.000 0.000 NA   NA
 838000 838001 CPS_0192 CPS_0193     TRUE 0.698 -112.000 0.000 NA   NA
 838001 838002 CPS_0193 CPS_0194     FALSE 0.147 131.000 0.000 NA   NA
 838002 838003 CPS_0194 CPS_0195     FALSE 0.020 479.000 0.000 NA   NA
 838003 838004 CPS_0195 CPS_0196     FALSE 0.133 207.000 0.000 NA   NA
 838004 838005 CPS_0196 CPS_0197     FALSE 0.080 281.000 0.000 NA   NA
 838005 838006 CPS_0197 CPS_0198     TRUE 0.416 48.000 0.000 NA   NA
 838010 838011 CPS_0202 CPS_0203     TRUE 0.489 36.000 0.000 NA   NA
 838012 10784578 CPS_0204 CPS_0205     FALSE 0.134 202.000 0.000 NA   NA
 10784578 838013 CPS_0205 CPS_0206     FALSE 0.209 95.000 0.000 NA   NA
 838013 838014 CPS_0206 CPS_0207     FALSE 0.398 107.000 0.057 NA   NA
 838014 838015 CPS_0207 CPS_0208     TRUE 0.997 -13.000 0.667 1.000   NA
 838015 838016 CPS_0208 CPS_0209   rpmB FALSE 0.091 260.000 0.000 1.000   NA
 838016 838017 CPS_0209 CPS_0210 rpmB rpmG TRUE 0.990 25.000 0.332 0.014 Y NA
 838017 838018 CPS_0210 CPS_0211 rpmG   FALSE 0.135 158.000 0.003 NA   NA
 838018 838019 CPS_0211 CPS_0212   mutM TRUE 0.440 51.000 0.010 NA   NA
 838022 838023 CPS_0215 CPS_0216     TRUE 0.850 26.000 0.069 NA   NA
 838023 838024 CPS_0216 CPS_0217   bioH FALSE 0.190 106.000 0.010 1.000   NA
 838027 838028 CPS_0220 CPS_0221     TRUE 0.818 13.000 0.015 NA   NA
 838028 838029 CPS_0221 CPS_0222     TRUE 0.865 1.000 0.000 NA   NA
 838029 838030 CPS_0222 CPS_0223     FALSE 0.159 115.000 0.000 NA   NA
 838030 838031 CPS_0223 CPS_0224     TRUE 0.620 25.000 0.000 NA   NA
 838031 838032 CPS_0224 CPS_0225     FALSE 0.303 71.000 0.000 NA   NA
 838035 838036 CPS_0228 CPS_0229   cyoE TRUE 0.659 79.000 0.099 1.000   NA
 838036 838037 CPS_0229 CPS_0230 cyoE   TRUE 0.997 -7.000 0.321 1.000 Y NA
 838037 838038 CPS_0230 CPS_0231     TRUE 0.989 5.000 0.255 NA   NA
 838038 838039 CPS_0231 CPS_0232     TRUE 0.987 45.000 0.722 NA   NA
 838039 838040 CPS_0232 CPS_0233     TRUE 0.912 11.000 0.041 NA   NA
 838040 838041 CPS_0233 CPS_0234   ctaG TRUE 0.989 28.000 0.536 1.000 N NA
 838041 838042 CPS_0234 CPS_0235 ctaG   TRUE 0.991 6.000 0.268 1.000 N NA
 838042 838043 CPS_0235 CPS_0236     TRUE 0.999 12.000 0.741 0.003 Y NA
 838043 838044 CPS_0236 CPS_0237   lexA FALSE 0.020 566.000 0.000 1.000 N NA
 838045 838046 CPS_0238 CPS_0239     TRUE 0.961 136.000 0.833 NA   NA
 838046 838047 CPS_0239 CPS_0240     TRUE 0.985 66.000 0.833 NA   NA
 838047 838048 CPS_0240 CPS_0241     TRUE 0.994 10.000 0.429 NA   NA
 838050 838051 CPS_0243 CPS_0244     TRUE 0.999 0.000 0.714 NA N NA
 838051 838052 CPS_0244 CPS_0245     FALSE 0.268 190.000 0.025 NA N NA
 838052 838053 CPS_0245 CPS_0246     TRUE 0.466 39.000 0.000 NA   NA
 838053 838054 CPS_0246 CPS_0247   glk1 FALSE 0.256 82.000 0.000 NA   NA
 838055 838056 CPS_0248 CPS_0249     TRUE 0.831 9.000 0.000 NA   NA
 838057 838058 CPS_0250 CPS_0251 thiC   TRUE 0.882 17.000 0.044 1.000 N NA
 838058 838059 CPS_0251 CPS_0252   thiS TRUE 0.995 0.000 0.342 1.000 N NA
 838059 838060 CPS_0252 CPS_0253 thiS thiG TRUE 0.987 0.000 0.064 1.000 Y NA
 838060 838061 CPS_0253 CPS_0254 thiG thiDE FALSE 0.301 301.000 0.012 0.005 Y NA
 838061 838062 CPS_0254 CPS_0255 thiDE   FALSE 0.400 68.000 0.000 1.000 N NA
 838066 838067 CPS_0259 CPS_0260     FALSE 0.148 130.000 0.000 NA   NA
 838069 838070 CPS_0262 CPS_0263     TRUE 0.867 0.000 0.000 NA   NA
 838070 838071 CPS_0263 CPS_0264     TRUE 0.967 0.000 0.083 NA   NA
 838071 838072 CPS_0264 CPS_0265     FALSE 0.168 108.000 0.000 NA   NA
 838073 838074 CPS_0266 CPS_0267     FALSE 0.394 50.000 0.000 1.000   NA
 838074 838075 CPS_0267 CPS_0268     FALSE 0.158 110.000 0.000 1.000   NA
 838076 838077 CPS_0269 CPS_0270     TRUE 0.835 8.000 0.000 NA   NA
 838077 838078 CPS_0270 CPS_0271     FALSE 0.155 120.000 0.000 NA   NA
 838079 838080 CPS_0272 CPS_0273     TRUE 0.492 125.000 0.000 0.063 Y NA
 838080 838081 CPS_0273 CPS_0274     TRUE 0.655 183.000 0.175 1.000 N NA
 838083 838084 CPS_0276 CPS_0277   iorB FALSE 0.042 421.000 0.000 NA N NA
 838084 838085 CPS_0277 CPS_0278 iorB iorA TRUE 0.998 3.000 0.400 0.001 Y NA
 838085 838086 CPS_0278 CPS_0279 iorA   FALSE 0.285 74.000 0.000 1.000   NA
 838086 838087 CPS_0279 CPS_0280     TRUE 0.800 -10.000 0.000 NA   NA
 838087 838088 CPS_0280 CPS_0281     FALSE 0.178 104.000 0.000 NA   NA
 838088 838089 CPS_0281 CPS_0282     TRUE 0.857 3.000 0.000 NA   NA
 838089 838090 CPS_0282 CPS_0283     FALSE 0.160 113.000 0.000 NA   NA
 838092 838093 CPS_0285 CPS_0286     FALSE 0.017 500.000 0.000 1.000   NA
 838095 838096 CPS_0288 CPS_0289     TRUE 0.997 10.000 0.538 NA N NA
 838096 838097 CPS_0289 CPS_0290     TRUE 0.651 105.000 0.136 1.000 N NA
 838097 838098 CPS_0290 CPS_0291     FALSE 0.140 150.000 0.000 1.000   NA
 838098 838099 CPS_0291 CPS_0292     FALSE 0.405 48.000 0.000 1.000   NA
 838099 838100 CPS_0292 CPS_0293     FALSE 0.139 184.000 0.000 NA   NA
 838101 838102 CPS_0294 CPS_0295 ubiE   TRUE 0.979 3.000 0.145 1.000   NA
 838102 838103 CPS_0295 CPS_0296   ubiB TRUE 0.945 69.000 0.432 1.000   NA
 838104 838105 CPS_0297 CPS_0298     FALSE 0.178 104.000 0.000 NA   NA
 838108 838109 CPS_0301 CPS_0302   manB FALSE 0.252 81.000 0.000 1.000   NA
 838111 838112 CPS_0304 CPS_0305     TRUE 0.867 0.000 0.000 NA   NA
 838112 838113 CPS_0305 CPS_0306     TRUE 0.732 -39.000 0.000 NA   NA
 838113 838114 CPS_0306 CPS_0307     TRUE 0.702 -99.000 0.000 NA   NA
 838114 838115 CPS_0307 CPS_0308     FALSE 0.157 117.000 0.000 NA   NA
 838115 838116 CPS_0308 CPS_0309     FALSE 0.240 84.000 0.000 1.000   NA
 838116 838117 CPS_0309 CPS_0310     FALSE 0.202 88.000 0.000 0.019   NA
 838121 838122 CPS_0314 CPS_0315     TRUE 0.867 0.000 0.000 NA   NA
 838122 838123 CPS_0315 CPS_0316     FALSE 0.146 146.000 0.000 NA   NA
 838123 838124 CPS_0316 CPS_0317     FALSE 0.405 50.000 0.000 NA   NA
 838124 838125 CPS_0317 CPS_0318     FALSE 0.112 238.000 0.000 NA   NA
 838127 838128 CPS_0320 CPS_0321     TRUE 0.846 39.000 0.118 NA   NA
 838128 838129 CPS_0321 CPS_0322   amiB TRUE 0.926 18.000 0.109 NA   NA
 838129 838130 CPS_0322 CPS_0323 amiB mutL TRUE 0.968 7.000 0.092 1.000 N NA
 838130 838131 CPS_0323 CPS_0324 mutL miaA TRUE 0.950 27.000 0.188 1.000 N NA
 838131 838132 CPS_0324 CPS_0325 miaA hfq TRUE 0.899 168.000 0.531 1.000   NA
 838132 838133 CPS_0325 CPS_0326 hfq hflX TRUE 0.826 53.000 0.141 1.000   NA
 838133 838134 CPS_0326 CPS_0327 hflX hflK TRUE 0.839 64.000 0.184 1.000   NA
 838134 838135 CPS_0327 CPS_0328 hflK hflC TRUE 1.000 4.000 0.947 0.011 Y NA
 838135 838136 CPS_0328 CPS_0329 hflC   FALSE 0.124 222.000 0.000 NA   NA
 838136 838137 CPS_0329 CPS_0330   purA FALSE 0.147 139.000 0.000 NA   NA
 838137 838138 CPS_0330 CPS_0331 purA   FALSE 0.013 831.000 0.000 1.000 N NA
 838138 838139 CPS_0331 CPS_0332     FALSE 0.147 131.000 0.000 NA   NA
 838140 838141 CPS_0333 CPS_0334   sthA FALSE 0.243 85.000 0.000 NA   NA
 838143 838144 CPS_0336 CPS_0337 trmA   FALSE 0.143 171.000 0.000 NA   NA
 838144 838145 CPS_0337 CPS_0338     FALSE 0.168 108.000 0.000 NA   NA
 838146 838147 CPS_0339 CPS_0340 rrsD   FALSE 0.188 101.000 0.000 NA   NA
 838147 838148 CPS_0340 CPS_0341     FALSE 0.205 96.000 0.000 NA   NA
 838148 838149 CPS_0341 CPS_0342   rrlD FALSE 0.146 138.000 0.000 NA   NA
 838151 838152 CPS_0344 CPS_0345 rrfD rrsE FALSE 0.016 546.000 0.000 NA   NA
 838152 838153 CPS_0345 CPS_0346 rrsE   FALSE 0.188 101.000 0.000 NA   NA
 838153 838154 CPS_0346 CPS_0347     FALSE 0.205 96.000 0.000 NA   NA
 838154 838155 CPS_0347 CPS_0348   rrlE FALSE 0.146 138.000 0.000 NA   NA
 838157 838158 CPS_0350 CPS_0351 rrfE   FALSE 0.058 326.000 0.000 NA   NA
 838159 838160 CPS_0352 CPS_0353     FALSE 0.059 320.000 0.000 NA   NA
 838162 838163 CPS_0355 CPS_0356     FALSE 0.035 391.000 0.000 NA   NA
 838163 838164 CPS_0356 CPS_0357     TRUE 0.581 28.000 0.000 NA   NA
 838164 838165 CPS_0357 CPS_0358     TRUE 0.720 -61.000 0.000 NA   NA
 838166 838167 CPS_0359 CPS_0360     TRUE 0.800 -10.000 0.000 NA   NA
 838168 838169 CPS_0361 CPS_0362     FALSE 0.227 90.000 0.000 NA   NA
 838169 838170 CPS_0362 CPS_0363     TRUE 0.854 -3.000 0.000 NA   NA
 838170 838171 CPS_0363 CPS_0364     TRUE 0.973 121.000 1.000 NA   NA
 838171 838172 CPS_0364 CPS_0365     TRUE 0.709 16.000 0.000 NA   NA
 838172 838173 CPS_0365 CPS_0366     TRUE 0.838 7.000 0.000 NA   NA
 838173 838174 CPS_0366 CPS_0367     TRUE 0.607 26.000 0.000 NA   NA
 838174 838175 CPS_0367 CPS_0368     TRUE 0.800 -10.000 0.000 NA   NA
 838175 838176 CPS_0368 CPS_0369     TRUE 0.750 -24.000 0.000 NA   NA
 838177 838178 CPS_0370 CPS_0371     FALSE 0.233 88.000 0.000 NA   NA
 838179 838180 CPS_0372 CPS_0373     FALSE 0.168 108.000 0.000 NA   NA
 838180 838181 CPS_0373 CPS_0374     TRUE 0.518 33.000 0.000 NA   NA
 838184 838185 CPS_0377 CPS_0378     FALSE 0.022 461.000 0.000 NA   NA
 838186 838187 CPS_0379 CPS_0380     FALSE 0.014 556.000 0.000 1.000   NA
 838187 838188 CPS_0380 CPS_0381     FALSE 0.230 89.000 0.000 NA   NA
 838188 838189 CPS_0381 CPS_0382     FALSE 0.142 174.000 0.000 NA   NA
 838189 838190 CPS_0382 CPS_0383     FALSE 0.014 559.000 0.000 NA   NA
 838193 838194 CPS_0386 CPS_0387     FALSE 0.143 159.000 0.000 NA   NA
 838194 838195 CPS_0387 CPS_0388     TRUE 0.877 9.000 0.000 1.000 N NA
 838195 838196 CPS_0388 CPS_0389     FALSE 0.210 120.000 0.000 1.000 N NA
 838196 838197 CPS_0389 CPS_0390     FALSE 0.034 449.000 0.000 1.000 N NA
 838197 838198 CPS_0390 CPS_0391   ppaC FALSE 0.198 149.000 0.000 1.000 N NA
 838199 838200 CPS_0392 CPS_0393 fadA fadB TRUE 0.997 16.000 0.607 1.000 Y NA
 838200 838201 CPS_0393 CPS_0394 fadB   FALSE 0.021 556.000 0.000 1.000 N NA
 838202 838203 CPS_0395 CPS_0396     FALSE 0.143 169.000 0.000 NA   NA
 838204 838205 CPS_0397 CPS_0398 ntrC ntrB TRUE 0.999 -3.000 0.587 1.000 Y NA
 838205 838206 CPS_0398 CPS_0399 ntrB   TRUE 0.654 161.000 0.188 NA   NA
 838206 838207 CPS_0399 CPS_0400   glnA FALSE 0.233 247.000 0.044 NA   NA
 838208 838209 CPS_0401 CPS_0402     FALSE 0.138 187.000 0.000 NA   NA
 838209 838210 CPS_0402 CPS_0403     TRUE 0.694 58.000 0.077 NA   NA
 838212 838213 CPS_0405 CPS_0406 mpl   FALSE 0.119 227.000 0.000 NA   NA
 838213 838214 CPS_0406 CPS_0407   def2 TRUE 0.845 5.000 0.000 NA   NA
 838214 838215 CPS_0407 CPS_0408 def2 ubiX FALSE 0.404 67.000 0.000 1.000 N NA
 838216 838217 CPS_0409 CPS_0410     FALSE 0.296 125.000 0.038 NA   NA
 838217 838218 CPS_0410 CPS_0411     TRUE 0.958 0.000 0.067 NA   NA
 838218 838219 CPS_0411 CPS_0412   zur FALSE 0.161 175.000 0.011 1.000   NA
 838220 838221 CPS_0413 CPS_0414     FALSE 0.147 142.000 0.000 NA   NA
 838221 838222 CPS_0414 CPS_0415   rpsF FALSE 0.136 193.000 0.000 NA   NA
 838222 838223 CPS_0415 CPS_0416 rpsF priB TRUE 0.975 8.000 0.122 1.000 N NA
 838223 838224 CPS_0416 CPS_0417 priB rpsR TRUE 0.837 54.000 0.128 1.000 N NA
 838224 838225 CPS_0417 CPS_0418 rpsR rplI TRUE 0.996 18.000 0.499 0.014 Y NA
 838226 838227 CPS_0419 CPS_0420     FALSE 0.164 107.000 0.000 1.000   NA
 838227 838228 CPS_0420 CPS_0421     TRUE 0.463 193.000 0.000 0.072 Y NA
 838231 838232 CPS_0424 CPS_0425 nudE cysQ TRUE 0.952 57.000 0.373 1.000 N NA
 838234 838235 CPS_0427 CPS_0428     TRUE 0.594 27.000 0.000 NA   NA
 838238 838239 CPS_0431 CPS_0432     FALSE 0.268 79.000 0.000 NA   NA
 838239 838240 CPS_0432 CPS_0433     FALSE 0.351 57.000 0.000 1.000   NA
 838242 838243 CPS_0435 CPS_0436     TRUE 0.844 -18.000 0.024 NA   NA
 838248 838249 CPS_0441 CPS_0442     FALSE 0.131 211.000 0.000 NA   NA
 838249 838250 CPS_0442 CPS_0443     TRUE 0.620 25.000 0.000 NA   NA
 838250 838251 CPS_0443 CPS_0444     TRUE 0.607 26.000 0.000 NA   NA
 838251 838252 CPS_0444 CPS_0445     TRUE 0.779 23.000 0.031 NA   NA
 838254 838255 CPS_0447 CPS_0448   hemE FALSE 0.038 377.000 0.000 NA   NA
 838255 838256 CPS_0448 CPS_0449 hemE   FALSE 0.014 764.000 0.000 1.000 N NA
 838256 838257 CPS_0449 CPS_0450     TRUE 0.997 3.000 0.500 1.000 N NA
 838257 838258 CPS_0450 CPS_0451     TRUE 0.998 0.000 0.667 NA   NA
 838262 838263 CPS_0455 CPS_0456 metB metL TRUE 0.973 75.000 0.428 1.000 Y NA
 838263 838264 CPS_0456 CPS_0457 metL   FALSE 0.134 203.000 0.000 NA   NA
 838264 838265 CPS_0457 CPS_0458     TRUE 0.453 41.000 0.000 NA   NA
 838267 838268 CPS_0460 CPS_0461 argC argB TRUE 0.861 74.000 0.097 0.003 Y NA
 838268 838269 CPS_0461 CPS_0462 argB argF TRUE 0.942 53.000 0.171 1.000 Y NA
 838269 838270 CPS_0462 CPS_0463 argF argG TRUE 0.576 118.000 0.025 1.000 Y NA
 838270 838271 CPS_0463 CPS_0464 argG argHA TRUE 0.996 3.000 0.278 1.000 Y NA
 838271 838272 CPS_0464 CPS_0465 argHA argA TRUE 0.817 43.000 0.004 1.000 Y NA
 838274 838275 CPS_0467 CPS_0468 pilM pilN TRUE 0.998 -12.000 0.616 NA Y NA
 838275 838276 CPS_0468 CPS_0469 pilN pilO TRUE 0.999 0.000 0.770 NA Y NA
 838276 838277 CPS_0469 CPS_0470 pilO pilP TRUE 0.999 -3.000 0.680 NA Y NA
 838277 838278 CPS_0470 CPS_0471 pilP   TRUE 0.999 12.000 0.668 NA Y NA
 838278 838279 CPS_0471 CPS_0472   aroK TRUE 0.769 241.000 0.319 1.000 N NA
 838279 838280 CPS_0472 CPS_0473 aroK aroB TRUE 0.970 36.000 0.208 1.000 Y NA
 838280 838281 CPS_0473 CPS_0474 aroB   FALSE 0.339 62.000 0.000 NA   NA
 838281 838282 CPS_0474 CPS_0475   dam FALSE 0.109 241.000 0.000 NA   NA
 838283 838284 CPS_0476 CPS_0477     TRUE 0.969 32.000 0.346 NA   NA
 838284 838285 CPS_0477 CPS_0478     FALSE 0.195 99.000 0.000 NA   NA
 838286 838287 CPS_0479 CPS_0480 rpe trpS TRUE 0.438 60.000 0.000 1.000 N NA
 838288 838289 CPS_0481 CPS_0482     TRUE 0.984 -9.000 0.200 NA N NA
 838290 838291 CPS_0483 CPS_0484     FALSE 0.193 180.000 0.000 1.000 N NA
 838291 838292 CPS_0484 CPS_0485     FALSE 0.383 248.000 0.000 0.014 Y NA
 838292 838293 CPS_0485 CPS_0486     TRUE 0.807 11.000 0.000 NA   NA
 838293 838294 CPS_0486 CPS_0487     TRUE 0.854 -3.000 0.000 NA   NA
 838296 838297 CPS_0489 CPS_0490     TRUE 0.838 7.000 0.000 NA   NA
 838297 838298 CPS_0490 CPS_0491     FALSE 0.148 129.000 0.000 NA   NA
 838298 838299 CPS_0491 CPS_0492     FALSE 0.096 258.000 0.000 NA   NA
 838299 838300 CPS_0492 CPS_0493     TRUE 0.729 15.000 0.000 NA   NA
 838300 838301 CPS_0493 CPS_0494     TRUE 0.849 -3.000 0.000 1.000   NA
 838303 838304 CPS_0496 CPS_0497     TRUE 0.867 0.000 0.000 NA   NA
 838304 838305 CPS_0497 CPS_0498     TRUE 0.807 11.000 0.000 NA   NA
 838306 838307 CPS_0499 CPS_0500     TRUE 0.996 0.000 0.429 NA   NA
 838307 838308 CPS_0500 CPS_0501     TRUE 0.424 46.000 0.000 NA   NA
 838308 838309 CPS_0501 CPS_0502     FALSE 0.143 172.000 0.000 NA   NA
 838309 838310 CPS_0502 CPS_0503     TRUE 0.769 13.000 0.000 NA   NA
 838311 838312 CPS_0504 CPS_0505     FALSE 0.147 141.000 0.000 NA   NA
 838313 838314 CPS_0506 CPS_0507     TRUE 0.803 147.000 0.318 NA   NA
 838314 838315 CPS_0507 CPS_0508     TRUE 0.990 -7.000 0.302 NA   NA
 838315 838316 CPS_0508 CPS_0509     TRUE 0.955 -3.000 0.069 1.000   NA
 838316 838317 CPS_0509 CPS_0510     FALSE 0.066 303.000 0.000 NA   NA
 838317 838318 CPS_0510 CPS_0511     FALSE 0.086 270.000 0.000 NA   NA
 838318 838319 CPS_0511 CPS_0512     FALSE 0.111 239.000 0.000 NA   NA
 838320 838321 CPS_0513 CPS_0514     TRUE 0.650 21.000 0.000 NA   NA
 838322 838323 CPS_0515 CPS_0516     TRUE 0.708 -70.000 0.000 NA   NA
 838323 838324 CPS_0516 CPS_0517     TRUE 0.943 -10.000 0.077 NA   NA
 838324 838325 CPS_0517 CPS_0518     TRUE 0.615 33.000 0.019 NA   NA
 838327 838328 CPS_0520 CPS_0521     FALSE 0.147 131.000 0.000 NA   NA
 838329 838330 CPS_0522 CPS_0523     FALSE 0.360 57.000 0.000 NA   NA
 838330 838331 CPS_0523 CPS_0524     FALSE 0.098 254.000 0.000 NA   NA
 838331 838332 CPS_0524 CPS_0525     TRUE 0.938 -55.000 0.000 NA Y NA
 838332 838333 CPS_0525 CPS_0526     FALSE 0.367 56.000 0.000 NA   NA
 838334 838335 CPS_0527 CPS_0528     FALSE 0.070 297.000 0.000 NA   NA
 838337 838338 CPS_0530 CPS_0531     TRUE 0.704 -91.000 0.000 NA   NA
 838340 838341 CPS_0533 CPS_0534     TRUE 0.822 10.000 0.000 NA   NA
 838343 838344 CPS_0536 CPS_0537     FALSE 0.052 388.000 0.000 1.000 N NA
 838344 838345 CPS_0537 CPS_0538     TRUE 0.499 138.000 0.000 NA Y NA
 838346 838347 CPS_0539 CPS_0540   prmA TRUE 0.763 -18.000 0.000 NA   NA
 838348 838349 CPS_0541 CPS_0542     FALSE 0.279 77.000 0.000 NA   NA
 838349 838350 CPS_0542 CPS_0543     FALSE 0.373 55.000 0.000 NA   NA
 838350 838351 CPS_0543 CPS_0544     FALSE 0.142 168.000 0.006 NA   NA
 838353 838354 CPS_0546 CPS_0547     TRUE 0.807 11.000 0.000 NA   NA
 838354 838355 CPS_0547 CPS_0548     FALSE 0.032 404.000 0.000 NA   NA
 838355 838356 CPS_0548 CPS_0549     TRUE 0.792 155.000 0.312 1.000   NA
 838357 838358 CPS_0550 CPS_0551   fis TRUE 0.839 63.000 0.161 1.000 N NA
 838358 838359 CPS_0551 CPS_0552 fis purH TRUE 0.524 148.000 0.101 1.000 N NA
 838359 838360 CPS_0552 CPS_0553 purH   FALSE 0.147 142.000 0.000 NA   NA
 838360 838361 CPS_0553 CPS_0554     FALSE 0.084 275.000 0.000 NA   NA
 838361 838362 CPS_0554 CPS_0555   purD TRUE 0.453 41.000 0.000 NA   NA
 838362 838363 CPS_0555 CPS_0556 purD rrsF FALSE 0.009 885.000 0.000 NA   NA
 838363 838364 CPS_0556 CPS_0557 rrsF   FALSE 0.188 101.000 0.000 NA   NA
 838364 838365 CPS_0557 CPS_0558     FALSE 0.205 96.000 0.000 NA   NA
 838365 838366 CPS_0558 CPS_0559   rrlF FALSE 0.146 138.000 0.000 NA   NA
 838368 838369 CPS_0561 CPS_0562 rrfF rrsG FALSE 0.016 539.000 0.000 NA   NA
 838369 838370 CPS_0562 CPS_0563 rrsG   FALSE 0.188 101.000 0.000 NA   NA
 838370 838371 CPS_0563 CPS_0564     FALSE 0.216 93.000 0.000 NA   NA
 838371 838372 CPS_0564 CPS_0565   rrlG FALSE 0.146 138.000 0.000 NA   NA
 838374 838375 CPS_0567 CPS_0568 rrfG   FALSE 0.099 252.000 0.000 NA   NA
 838376 838377 CPS_0569 CPS_0570     TRUE 0.594 116.000 0.143 NA   NA
 838378 838379 CPS_0571 CPS_0572     FALSE 0.047 400.000 0.000 1.000 N NA
 838379 838380 CPS_0572 CPS_0573     TRUE 0.934 97.000 0.500 1.000 N NA
 838380 838381 CPS_0573 CPS_0574     TRUE 0.966 -7.000 0.000 NA Y NA
 838381 838382 CPS_0574 CPS_0575     TRUE 0.641 22.000 0.000 NA   NA
 838382 838383 CPS_0575 CPS_0576     FALSE 0.067 299.000 0.000 1.000   NA
 838383 838384 CPS_0576 CPS_0577     TRUE 0.999 11.000 0.957 1.000   NA
 838384 838385 CPS_0577 CPS_0578     FALSE 0.016 532.000 0.000 1.000   NA
 838385 838386 CPS_0578 CPS_0579     TRUE 0.999 0.000 1.000 1.000 N NA
 838386 838387 CPS_0579 CPS_0580     TRUE 0.990 66.000 1.000 1.000 N NA
 838387 838388 CPS_0580 CPS_0581     FALSE 0.146 138.000 0.000 NA   NA
 838388 838389 CPS_0581 CPS_0582     TRUE 0.800 -10.000 0.000 NA   NA
 838389 838390 CPS_0582 CPS_0583     TRUE 0.760 -16.000 0.000 1.000   NA
 838390 838391 CPS_0583 CPS_0584     FALSE 0.090 265.000 0.000 NA   NA
 838391 838392 CPS_0584 CPS_0585     TRUE 0.854 -3.000 0.000 NA   NA
 838392 838393 CPS_0585 CPS_0586     FALSE 0.131 211.000 0.000 NA   NA
 838393 838394 CPS_0586 CPS_0587     FALSE 0.048 342.000 0.000 1.000   NA
 838394 838395 CPS_0587 CPS_0588     TRUE 0.857 2.000 0.000 1.000   NA
 838395 838396 CPS_0588 CPS_0589     TRUE 0.987 -3.000 0.080 1.000 Y NA
 838396 838397 CPS_0589 CPS_0590     TRUE 0.965 61.000 0.297 NA Y NA
 838397 838398 CPS_0590 CPS_0591   ugd TRUE 0.942 16.000 0.015 NA Y NA
 838398 838399 CPS_0591 CPS_0592 ugd   TRUE 0.822 172.000 0.182 1.000 Y NA
 838399 838400 CPS_0592 CPS_0593   galU1 TRUE 0.733 65.000 0.000 1.000 Y NA
 838400 838401 CPS_0593 CPS_0594 galU1   FALSE 0.317 282.000 0.000 0.015 Y NA
 838402 838403 CPS_0595 CPS_0596     TRUE 0.476 70.000 0.032 NA   NA
 838403 838404 CPS_0596 CPS_0597     TRUE 0.898 168.000 0.516 NA   NA
 838404 838405 CPS_0597 CPS_0598     TRUE 0.924 76.000 0.372 NA   NA
 838406 838407 CPS_0599 CPS_0600   norC FALSE 0.078 263.000 0.000 0.024   NA
 838407 838408 CPS_0600 CPS_0601 norC norB TRUE 0.999 4.000 0.794 0.001   NA
 838410 838411 CPS_0603 CPS_0604     FALSE 0.029 420.000 0.000 NA   NA
 838411 838412 CPS_0604 CPS_0605     TRUE 0.938 11.000 0.069 NA   NA
 838412 838413 CPS_0605 CPS_0606   typA FALSE 0.076 282.000 0.000 1.000   NA
 838413 838414 CPS_0606 CPS_0607 typA   FALSE 0.056 329.000 0.000 NA   NA
 838416 838417 CPS_0609 CPS_0610 rbn dtd TRUE 0.954 -3.000 0.069 1.000   NA
 838417 838418 CPS_0610 CPS_0611 dtd rplN FALSE 0.371 261.000 0.000 1.000 Y NA
 838418 838419 CPS_0611 CPS_0612 rplN rplX TRUE 0.999 13.000 0.810 0.018 Y NA
 838419 838420 CPS_0612 CPS_0613 rplX rplE TRUE 0.999 13.000 0.758 0.013 Y NA
 838420 838421 CPS_0613 CPS_0614 rplE rpsN TRUE 0.998 5.000 0.496 0.013 Y NA
 838421 838422 CPS_0614 CPS_0615 rpsN rpsH TRUE 0.995 20.000 0.473 0.013 Y NA
 838422 838423 CPS_0615 CPS_0616 rpsH rplF TRUE 0.999 11.000 0.808 0.013 Y NA
 838423 838424 CPS_0616 CPS_0617 rplF rplR TRUE 0.999 10.000 0.815 0.013 Y NA
 838424 838425 CPS_0617 CPS_0618 rplR rpsE TRUE 0.999 10.000 0.814 0.018 Y NA
 838425 838426 CPS_0618 CPS_0619 rpsE rpmD TRUE 0.999 1.000 0.789 0.018 Y NA
 838426 838427 CPS_0619 CPS_0620 rpmD rplO TRUE 0.999 3.000 0.653 0.002 Y NA
 838427 838428 CPS_0620 CPS_0621 rplO secY TRUE 0.998 7.000 0.730 1.000 N NA
 838428 838429 CPS_0621 CPS_0622 secY rpmJ TRUE 0.848 31.000 0.089 1.000   NA
 838429 838430 CPS_0622 CPS_0623 rpmJ rpsM TRUE 0.651 152.000 0.194 0.013   NA
 838430 838431 CPS_0623 CPS_0624 rpsM rpsK TRUE 0.999 14.000 0.810 0.013 Y NA
 838431 838432 CPS_0624 CPS_0625 rpsK rpsD TRUE 0.992 33.000 0.509 0.018 Y NA
 838432 838433 CPS_0625 CPS_0626 rpsD rpoA TRUE 0.990 26.000 0.549 1.000 N NA
 838433 838434 CPS_0626 CPS_0627 rpoA rplQ TRUE 0.993 44.000 0.873 1.000 N NA
 838434 838435 CPS_0627 CPS_0628 rplQ prkB FALSE 0.186 196.000 0.000 1.000 N NA
 838436 838437 CPS_0629 CPS_0630   speD FALSE 0.170 222.000 0.000 1.000 N NA
 838437 838438 CPS_0630 CPS_0631 speD   TRUE 0.882 13.000 0.025 1.000 N NA
 838438 838439 CPS_0631 CPS_0632     FALSE 0.167 215.000 0.015 NA   NA
 838439 838440 CPS_0632 CPS_0633   astE FALSE 0.142 174.000 0.000 NA   NA
 838440 838441 CPS_0633 CPS_0634 astE astD TRUE 0.895 1.000 0.000 0.072 N NA
 838441 838442 CPS_0634 CPS_0635 astD astA TRUE 0.839 126.000 0.333 1.000 N NA
 838442 838443 CPS_0635 CPS_0636 astA argD TRUE 0.607 94.000 0.000 1.000 Y NA
 838443 838444 CPS_0636 CPS_0637 argD   FALSE 0.016 669.000 0.000 NA N NA
 838444 838445 CPS_0637 CPS_0638   pabA FALSE 0.213 213.000 0.013 NA N NA
 838445 838446 CPS_0638 CPS_0639 pabA   FALSE 0.138 170.000 0.000 1.000   NA
 838447 838448 CPS_0640 CPS_0641     FALSE 0.096 301.000 0.000 1.000 N NA
 838448 838449 CPS_0641 CPS_0642     TRUE 0.990 13.000 0.339 1.000 N NA
 838451 838452 CPS_0644 CPS_0645     FALSE 0.143 162.000 0.000 NA   NA
 838452 838453 CPS_0645 CPS_0646     FALSE 0.349 60.000 0.000 NA   NA
 838453 838454 CPS_0646 CPS_0647   feoA FALSE 0.213 94.000 0.000 NA   NA
 838454 838455 CPS_0647 CPS_0648 feoA feoB TRUE 0.791 51.000 0.000 1.000 Y NA
 838455 838456 CPS_0648 CPS_0649 feoB pfkA FALSE 0.018 598.000 0.000 1.000 N NA
 838457 838458 CPS_0650 CPS_0651     TRUE 0.999 7.000 0.566 1.000 Y NA
 838458 838459 CPS_0651 CPS_0652     TRUE 0.791 45.000 0.094 1.000   NA
 838459 838460 CPS_0652 CPS_0653     TRUE 0.996 10.000 0.556 0.001   NA
 838460 838461 CPS_0653 CPS_0654     FALSE 0.048 349.000 0.000 NA   NA
 838461 838462 CPS_0654 CPS_0655     FALSE 0.145 151.000 0.000 NA   NA
 838462 838463 CPS_0655 CPS_0656     FALSE 0.050 341.000 0.000 NA   NA
 838463 838464 CPS_0656 CPS_0657     TRUE 0.999 0.000 0.627 0.004 Y NA
 838464 838465 CPS_0657 CPS_0658     TRUE 0.959 56.000 0.242 1.000 Y NA
 838467 838468 CPS_0660 CPS_0661     TRUE 0.897 0.000 0.000 0.071 N NA
 838468 838469 CPS_0661 CPS_0662     FALSE 0.167 225.000 0.000 1.000 N NA
 838470 838471 CPS_0663 CPS_0664     TRUE 0.966 38.000 0.375 NA   NA
 838471 838472 CPS_0664 CPS_0665     TRUE 0.926 56.000 0.150 0.071 Y NA
 838472 838473 CPS_0665 CPS_0666     TRUE 0.960 11.000 0.000 1.000 Y NA
 838473 838474 CPS_0666 CPS_0667     FALSE 0.230 107.000 0.000 1.000 N NA
 838474 838475 CPS_0667 CPS_0668     FALSE 0.400 68.000 0.000 1.000 N NA
 838475 838476 CPS_0668 CPS_0669     TRUE 0.765 18.000 0.000 NA N NA
 838476 838477 CPS_0669 CPS_0670     FALSE 0.149 246.000 0.000 NA N NA
 838477 838478 CPS_0670 CPS_0671     TRUE 0.895 -3.000 0.000 1.000 N NA
 838478 838479 CPS_0671 CPS_0672     FALSE 0.335 63.000 0.000 NA   NA
 838479 838480 CPS_0672 CPS_0673     TRUE 0.556 30.000 0.000 NA   NA
 838481 838482 CPS_0674 CPS_0675     FALSE 0.199 147.000 0.000 1.000 N NA
 838483 838484 CPS_0676 CPS_0677     TRUE 0.448 42.000 0.000 NA   NA
 838485 838486 CPS_0678 CPS_0679     TRUE 0.902 0.000 0.017 NA   NA
 838486 838487 CPS_0679 CPS_0680     FALSE 0.143 156.000 0.000 NA   NA
 838487 838488 CPS_0680 CPS_0681     TRUE 0.999 3.000 0.750 1.000 Y NA
 838488 838489 CPS_0681 CPS_0682     FALSE 0.060 316.000 0.000 NA   NA
 838489 838490 CPS_0682 CPS_0683     TRUE 0.800 -10.000 0.000 NA   NA
 838490 838491 CPS_0683 CPS_0684     FALSE 0.201 130.000 0.000 1.000 N NA
 838492 838493 CPS_0685 CPS_0686     TRUE 0.829 13.000 0.000 1.000 N NA
 838493 838494 CPS_0686 CPS_0687     FALSE 0.130 200.000 0.000 1.000   NA
 838494 838495 CPS_0687 CPS_0688     FALSE 0.011 621.000 0.000 1.000   NA
 838495 838496 CPS_0688 CPS_0689     FALSE 0.186 208.000 0.000 NA N NA
 838496 838497 CPS_0689 CPS_0690     FALSE 0.133 206.000 0.000 NA   NA
 838497 838498 CPS_0690 CPS_0691     TRUE 0.845 5.000 0.000 NA   NA
 838500 838501 CPS_0693 CPS_0694     FALSE 0.324 331.000 0.150 NA   NA
 838501 838502 CPS_0694 CPS_0695     TRUE 0.684 92.000 0.121 NA N NA
 838502 838503 CPS_0695 CPS_0696     FALSE 0.031 407.000 0.000 NA   NA
 838503 838504 CPS_0696 CPS_0697     FALSE 0.168 108.000 0.000 NA   NA
 838506 838507 CPS_0699 CPS_0700     TRUE 0.838 7.000 0.000 NA   NA
 838507 838508 CPS_0700 CPS_0701     TRUE 0.989 10.000 0.286 NA   NA
 838508 838509 CPS_0701 CPS_0702     FALSE 0.399 51.000 0.000 NA   NA
 838509 838510 CPS_0702 CPS_0703     FALSE 0.216 93.000 0.000 NA   NA
 838511 838512 CPS_0704 CPS_0705     FALSE 0.134 203.000 0.000 NA   NA
 838512 838513 CPS_0705 CPS_0706     TRUE 0.841 6.000 0.000 NA   NA
 838513 838514 CPS_0706 CPS_0707     TRUE 0.695 17.000 0.000 NA   NA
 838514 838515 CPS_0707 CPS_0708     TRUE 0.747 -27.000 0.000 NA   NA
 838515 838516 CPS_0708 CPS_0709   ppiA2 TRUE 0.818 238.000 0.417 NA   NA
 838516 838517 CPS_0709 CPS_0710 ppiA2   TRUE 0.927 50.000 0.244 NA N NA
 838517 838518 CPS_0710 CPS_0711     TRUE 0.983 14.000 0.248 NA N NA
 838519 838520 CPS_0712 CPS_0713 bolA   FALSE 0.242 137.000 0.028 NA   NA
 838521 838522 CPS_0714 CPS_0715     FALSE 0.248 84.000 0.000 NA   NA
 838522 838523 CPS_0715 CPS_0716     FALSE 0.125 220.000 0.000 NA   NA
 838524 838525 CPS_0717 CPS_0718     FALSE 0.118 455.000 0.000 1.000 Y NA
 838525 838526 CPS_0718 CPS_0719     FALSE 0.015 542.000 0.000 1.000   NA
 838527 838528 CPS_0720 CPS_0721     FALSE 0.141 134.000 0.000 1.000   NA
 838529 838530 CPS_0722 CPS_0723   natA TRUE 0.911 63.000 0.292 1.000   NA
 838530 838531 CPS_0723 CPS_0724 natA natB TRUE 0.996 -3.000 0.271 NA Y NA
 838531 838532 CPS_0724 CPS_0725 natB   FALSE 0.050 397.000 0.000 NA N NA
 838532 838533 CPS_0725 CPS_0726     TRUE 0.854 -3.000 0.000 NA   NA
 838535 838536 CPS_0728 CPS_0729 glyA1   FALSE 0.153 311.000 0.032 NA N NA
 838536 838537 CPS_0729 CPS_0730   ribD TRUE 0.901 74.000 0.277 NA N NA
 838537 838538 CPS_0730 CPS_0731 ribD ribE1 TRUE 0.986 48.000 0.456 1.000 Y NA
 838538 838539 CPS_0731 CPS_0732 ribE1 ribB TRUE 0.662 142.000 0.065 1.000 Y NA
 838539 838540 CPS_0732 CPS_0733 ribB   FALSE 0.143 162.000 0.000 NA   NA
 838540 838541 CPS_0733 CPS_0734     FALSE 0.367 56.000 0.000 NA   NA
 838541 838542 CPS_0734 CPS_0735     TRUE 0.886 -13.000 0.034 NA   NA
 838543 838544 CPS_0736 CPS_0737     FALSE 0.344 61.000 0.000 NA   NA
 838544 838545 CPS_0737 CPS_0738   valS FALSE 0.029 475.000 0.000 1.000 N NA
 838545 838546 CPS_0738 CPS_0739 valS holC TRUE 0.494 132.000 0.089 1.000 N NA
 838546 838547 CPS_0739 CPS_0740 holC pepA TRUE 0.933 95.000 0.494 1.000 N NA
 838548 838549 CPS_0741 CPS_0742     TRUE 0.867 0.000 0.000 NA   NA
 838549 838550 CPS_0742 CPS_0743     TRUE 0.867 0.000 0.000 NA   NA
 838551 838552 CPS_0744 CPS_0745     FALSE 0.064 309.000 0.000 NA   NA
 838552 838553 CPS_0745 CPS_0746     TRUE 0.998 15.000 0.833 NA N NA
 838554 838555 CPS_0747 CPS_0748     FALSE 0.124 222.000 0.000 NA   NA
 838555 838556 CPS_0748 CPS_0749   ppiC1 FALSE 0.184 102.000 0.000 NA   NA
 838556 838557 CPS_0749 CPS_0750 ppiC1   FALSE 0.025 440.000 0.000 NA   NA
 838559 838560 CPS_0752 CPS_0753     TRUE 0.854 -3.000 0.000 NA   NA
 838560 838561 CPS_0753 CPS_0754     FALSE 0.055 302.000 0.000 0.002   NA
 838561 838562 CPS_0754 CPS_0755     FALSE 0.295 91.000 0.000 1.000 N NA
 838563 838564 CPS_0756 CPS_0757     FALSE 0.033 399.000 0.000 NA   NA
 838564 838565 CPS_0757 CPS_0758     FALSE 0.411 49.000 0.000 NA   NA
 838565 838566 CPS_0758 CPS_0759     FALSE 0.088 268.000 0.000 NA   NA
 838567 838568 CPS_0760 CPS_0761     FALSE 0.009 874.000 0.000 NA   NA
 838568 838569 CPS_0761 CPS_0762     TRUE 0.913 21.000 0.010 0.001 Y NA
 838569 838570 CPS_0762 CPS_0763     FALSE 0.080 329.000 0.000 1.000 N NA
 838570 838571 CPS_0763 CPS_0764     FALSE 0.011 619.000 0.000 NA   NA
 838571 838572 CPS_0764 CPS_0765     TRUE 0.518 33.000 0.000 NA   NA
 838572 838573 CPS_0765 CPS_0766     TRUE 0.867 0.000 0.000 NA   NA
 838573 838574 CPS_0766 CPS_0767     FALSE 0.030 407.000 0.000 1.000   NA
 838574 838575 CPS_0767 CPS_0768   selD FALSE 0.138 166.000 0.000 1.000   NA
 838575 838576 CPS_0768 CPS_0769 selD   TRUE 0.988 -3.000 0.214 NA   NA
 838578 838579 CPS_0771 CPS_0772     FALSE 0.195 99.000 0.000 NA   NA
 838579 838580 CPS_0772 CPS_0773     TRUE 0.701 -100.000 0.000 NA   NA
 838580 838581 CPS_0773 CPS_0774     FALSE 0.046 349.000 0.000 1.000   NA
 838581 838582 CPS_0774 CPS_0775     FALSE 0.240 104.000 0.000 1.000 N NA
 838582 838583 CPS_0775 CPS_0776     TRUE 0.999 18.000 1.000 NA Y NA
 838583 838584 CPS_0776 CPS_0777     FALSE 0.143 169.000 0.000 NA   NA
 838584 838585 CPS_0777 CPS_0778     FALSE 0.147 134.000 0.000 NA   NA
 838585 838586 CPS_0778 CPS_0779     TRUE 0.999 -13.000 0.667 1.000 Y NA
 838586 838587 CPS_0779 CPS_0780     FALSE 0.202 129.000 0.000 1.000 N NA
 838589 838590 CPS_0782 CPS_0783     TRUE 0.716 -67.000 0.000 NA   NA
 838591 838592 CPS_0784 CPS_0785     FALSE 0.049 346.000 0.000 NA   NA
 838596 838597 CPS_0789 CPS_0790     FALSE 0.013 593.000 0.000 NA   NA
 838597 838598 CPS_0790 CPS_0791     FALSE 0.145 150.000 0.000 NA   NA
 838598 838599 CPS_0791 CPS_0792     TRUE 0.709 16.000 0.000 NA   NA
 838599 838600 CPS_0792 CPS_0793     FALSE 0.240 86.000 0.000 NA   NA
 838601 838602 CPS_0794 CPS_0795     TRUE 0.567 29.000 0.000 NA   NA
 838602 838603 CPS_0795 CPS_0796     FALSE 0.268 79.000 0.000 NA   NA
 838604 838605 CPS_0797 CPS_0798     FALSE 0.188 99.000 0.000 1.000   NA
 838606 838607 CPS_0799 CPS_0800     FALSE 0.159 114.000 0.000 NA   NA
 838609 838610 CPS_0802 CPS_0803     FALSE 0.143 163.000 0.000 NA   NA
 838610 838611 CPS_0803 CPS_0804     FALSE 0.167 231.000 0.000 NA N NA
 838611 838612 CPS_0804 CPS_0805     TRUE 0.563 130.000 0.118 NA N NA
 838612 838613 CPS_0805 CPS_0806     TRUE 0.544 31.000 0.000 NA   NA
 838613 838614 CPS_0806 CPS_0807     TRUE 0.862 2.000 0.000 NA   NA
 838615 838616 CPS_0808 CPS_0809     TRUE 0.453 41.000 0.000 NA   NA
 838616 838617 CPS_0809 CPS_0810     TRUE 0.470 101.000 0.071 NA   NA
 838617 838618 CPS_0810 CPS_0811     TRUE 0.935 -7.000 0.050 NA   NA
 838618 838619 CPS_0811 CPS_0812     FALSE 0.284 257.000 0.070 NA   NA
 838619 838620 CPS_0812 CPS_0813     TRUE 0.518 33.000 0.000 NA   NA
 838620 838621 CPS_0813 CPS_0814     TRUE 0.432 38.000 0.000 0.036   NA
 838626 838627 CPS_0819 CPS_0820     FALSE 0.063 304.000 0.000 1.000   NA
 838628 838629 CPS_0821 CPS_0822     FALSE 0.335 63.000 0.000 NA   NA
 838630 838631 CPS_0823 CPS_0824     TRUE 0.824 198.000 0.333 NA N NA
 838631 838632 CPS_0824 CPS_0825     TRUE 0.744 -28.000 0.000 NA   NA
 838633 838634 CPS_0826 CPS_0827     TRUE 0.571 33.000 0.017 0.009   NA
 838634 838635 CPS_0827 CPS_0828     FALSE 0.112 232.000 0.000 1.000   NA
 838635 838636 CPS_0828 CPS_0829     TRUE 0.478 36.000 0.000 1.000   NA
 838637 838638 CPS_0830 CPS_0831     TRUE 0.594 27.000 0.000 NA   NA
 838640 838641 CPS_0833 CPS_0834     FALSE 0.146 145.000 0.000 NA   NA
 838641 838642 CPS_0834 CPS_0835     FALSE 0.032 403.000 0.000 NA   NA
 838642 838643 CPS_0835 CPS_0836     FALSE 0.310 69.000 0.000 NA   NA
 838643 838644 CPS_0836 CPS_0837     TRUE 0.700 -103.000 0.000 NA   NA
 838648 838649 CPS_0841 CPS_0842 atsA   FALSE 0.144 153.000 0.000 NA   NA
 838651 838652 CPS_0844 CPS_0845     FALSE 0.136 193.000 0.000 NA   NA
 838652 838653 CPS_0845 CPS_0846     TRUE 0.604 62.000 0.050 NA   NA
 838653 838654 CPS_0846 CPS_0847     TRUE 0.922 3.000 0.030 NA   NA
 838655 838656 CPS_0848 CPS_0849 hmpA   TRUE 0.611 78.000 0.063 1.000 N NA
 838656 838657 CPS_0849 CPS_0850     TRUE 0.997 2.000 0.500 NA   NA
 838659 838660 CPS_0852 CPS_0853     FALSE 0.028 421.000 0.000 NA   NA
 838660 838661 CPS_0853 CPS_0854     FALSE 0.074 285.000 0.000 1.000   NA
 838663 838664 CPS_0856 CPS_0857   pqqE TRUE 0.890 -3.000 0.021 0.032   NA
 838664 838665 CPS_0857 CPS_0858 pqqE pqqD TRUE 0.984 -7.000 0.211 0.001   NA
 838665 838666 CPS_0858 CPS_0859 pqqD pqqC TRUE 0.989 -3.000 0.246 0.001   NA
 838666 838667 CPS_0859 CPS_0860 pqqC   TRUE 0.739 -31.000 0.000 NA   NA
 838667 838668 CPS_0860 CPS_0861   pqqB FALSE 0.135 201.000 0.000 NA   NA
 838668 838669 CPS_0861 CPS_0862 pqqB pqqA FALSE 0.165 239.000 0.028 0.001   NA
 838669 838670 CPS_0862 CPS_0863 pqqA pip1 FALSE 0.158 110.000 0.000 1.000   NA
 838670 838671 CPS_0863 CPS_0864 pip1 rpsQ FALSE 0.032 462.000 0.000 1.000 N NA
 838671 838672 CPS_0864 CPS_0865 rpsQ rpmC TRUE 1.000 0.000 0.828 0.013 Y NA
 838672 838673 CPS_0865 CPS_0866 rpmC rplP TRUE 0.999 0.000 0.802 0.013 Y NA
 838673 838674 CPS_0866 CPS_0867 rplP rpsC TRUE 0.999 12.000 0.828 0.017 Y NA
 838674 838675 CPS_0867 CPS_0868 rpsC rplV TRUE 0.999 13.000 0.719 0.017 Y NA
 838675 838676 CPS_0868 CPS_0869 rplV rpsS TRUE 0.999 12.000 0.769 0.017 Y NA
 838676 838677 CPS_0869 CPS_0870 rpsS rplB TRUE 0.991 82.000 0.820 0.017 Y NA
 838677 838678 CPS_0870 CPS_0871 rplB rplW TRUE 0.999 13.000 0.849 0.017 Y NA
 838678 838679 CPS_0871 CPS_0872 rplW rplD TRUE 0.999 -3.000 0.513 0.013 Y NA
 838679 838680 CPS_0872 CPS_0873 rplD rplC TRUE 0.996 17.000 0.486 0.013 Y NA
 838680 838681 CPS_0873 CPS_0874 rplC rpsJ TRUE 0.993 15.000 0.307 0.017 Y NA
 838682 838683 CPS_0875 CPS_0876 fusA1   FALSE 0.184 102.000 0.000 NA   NA
 838684 838685 CPS_0877 CPS_0878     FALSE 0.023 455.000 0.000 NA   NA
 838686 838687 CPS_0879 CPS_0880     TRUE 0.800 -10.000 0.000 NA   NA
 838688 838689 CPS_0881 CPS_0882     FALSE 0.227 90.000 0.000 NA   NA
 838689 838690 CPS_0882 CPS_0883     TRUE 0.854 -3.000 0.000 NA   NA
 838690 838691 CPS_0883 CPS_0884     TRUE 0.973 121.000 1.000 NA   NA
 838691 838692 CPS_0884 CPS_0885     TRUE 0.709 16.000 0.000 NA   NA
 838692 838693 CPS_0885 CPS_0886     TRUE 0.838 7.000 0.000 NA   NA
 838693 838694 CPS_0886 CPS_0887     TRUE 0.607 26.000 0.000 NA   NA
 838694 838695 CPS_0887 CPS_0888     TRUE 0.800 -10.000 0.000 NA   NA
 838695 838696 CPS_0888 CPS_0889     TRUE 0.857 3.000 0.000 NA   NA
 838699 838700 CPS_0892 CPS_0893     TRUE 0.722 -58.000 0.000 NA   NA
 838701 838702 CPS_0894 CPS_0895     TRUE 0.983 -69.000 0.167 0.053 Y NA
 838702 838703 CPS_0895 CPS_0896     FALSE 0.240 86.000 0.000 NA   NA
 838703 838704 CPS_0896 CPS_0897     FALSE 0.188 101.000 0.000 NA   NA
 838704 838705 CPS_0897 CPS_0898     TRUE 0.854 -3.000 0.000 NA   NA
 838705 838706 CPS_0898 CPS_0899     TRUE 0.733 -34.000 0.000 NA   NA
 838709 838710 CPS_0902 CPS_0903     TRUE 0.531 32.000 0.000 NA   NA
 838710 838711 CPS_0903 CPS_0904     TRUE 0.572 28.000 0.004 NA   NA
 838711 838712 CPS_0904 CPS_0905     FALSE 0.303 71.000 0.000 NA   NA
 838712 838713 CPS_0905 CPS_0906     TRUE 0.867 0.000 0.000 NA   NA
 838713 838714 CPS_0906 CPS_0907     FALSE 0.310 69.000 0.000 NA   NA
 838715 838716 CPS_0908 CPS_0909 hutH hutU TRUE 0.901 163.000 0.315 0.001 Y NA
 838716 838717 CPS_0909 CPS_0910 hutU hutC TRUE 0.461 140.000 0.077 1.000 N NA
 838718 838719 CPS_0911 CPS_0912 hutI   FALSE 0.014 557.000 0.000 1.000   NA
 838719 838720 CPS_0912 CPS_0913     TRUE 0.596 26.000 0.000 1.000   NA
 838720 838721 CPS_0913 CPS_0914     TRUE 0.996 15.000 0.700 NA   NA
 838726 838727 CPS_0919 CPS_0920   uvrA FALSE 0.287 93.000 0.000 1.000 N NA
 838727 838728 CPS_0920 CPS_0921 uvrA   FALSE 0.038 377.000 0.000 NA   NA
 838729 838730 CPS_0922 CPS_0923     FALSE 0.146 135.000 0.000 NA   NA
 838732 838733 CPS_0925 CPS_0926 fadH1 pssA FALSE 0.204 126.000 0.000 1.000 N NA
 838735 838736 CPS_0928 CPS_0929     FALSE 0.143 162.000 0.000 NA   NA
 838736 838737 CPS_0929 CPS_0930   ssb FALSE 0.043 360.000 0.000 NA   NA
 838741 838742 CPS_0934 CPS_0935     FALSE 0.314 86.000 0.000 1.000 N NA
 838742 838743 CPS_0935 CPS_0936     FALSE 0.363 141.000 0.044 1.000 N NA
 838743 838744 CPS_0936 CPS_0937     TRUE 0.776 114.000 0.241 1.000 N NA
 838745 838746 CPS_0938 CPS_0939     FALSE 0.138 155.000 0.000 1.000   NA
 838747 838748 CPS_0940 CPS_0941     TRUE 0.959 -12.000 0.098 1.000 N NA
 838749 838750 CPS_0942 CPS_0943   bdhA1 FALSE 0.045 351.000 0.000 1.000   NA
 838750 838751 CPS_0943 CPS_0944 bdhA1   FALSE 0.017 530.000 0.000 NA   NA
 838751 838752 CPS_0944 CPS_0945     FALSE 0.140 181.000 0.000 NA   NA
 838752 838753 CPS_0945 CPS_0946   accC FALSE 0.165 109.000 0.000 NA   NA
 838753 838754 CPS_0946 CPS_0947 accC accB TRUE 0.987 23.000 0.275 0.001 Y NA
 838754 838755 CPS_0947 CPS_0948 accB aroQ TRUE 0.849 91.000 0.254 1.000 N NA
 838756 838757 CPS_0949 CPS_0950     FALSE 0.110 240.000 0.000 NA   NA
 838757 838758 CPS_0950 CPS_0951     TRUE 0.992 -22.000 0.458 NA   NA
 838758 838759 CPS_0951 CPS_0952     TRUE 0.966 11.000 0.125 1.000   NA
 838760 838761 CPS_0953 CPS_0954 dsbD cutA TRUE 0.969 6.000 0.092 1.000 N NA
 838762 838763 CPS_0955 CPS_0956 fsxA groES FALSE 0.296 131.000 0.040 NA   NA
 838763 838764 CPS_0956 CPS_0957 groES groEL TRUE 0.965 181.000 0.631 0.008 Y NA
 838765 838766 CPS_0958 CPS_0959     FALSE 0.114 235.000 0.000 NA   NA
 838766 838767 CPS_0959 CPS_0960     TRUE 0.850 4.000 0.000 NA   NA
 838768 838769 CPS_0961 CPS_0962     TRUE 0.976 18.000 0.279 NA   NA
 838769 838770 CPS_0962 CPS_0963     FALSE 0.349 60.000 0.000 NA   NA
 838771 838772 CPS_0964 CPS_0965     FALSE 0.268 79.000 0.000 NA   NA
 838773 838774 CPS_0966 CPS_0967     FALSE 0.143 160.000 0.000 NA   NA
 838774 838775 CPS_0967 CPS_0968     FALSE 0.248 84.000 0.000 NA   NA
 838775 838776 CPS_0968 CPS_0969     FALSE 0.093 262.000 0.000 NA   NA
 838777 838778 CPS_0970 CPS_0971     FALSE 0.271 100.000 0.021 NA   NA
 838779 838780 CPS_0972 CPS_0973 efp   FALSE 0.400 49.000 0.000 1.000   NA
 838780 838781 CPS_0973 CPS_0974     FALSE 0.072 290.000 0.000 1.000   NA
 838782 838783 CPS_0975 CPS_0976   glk2 FALSE 0.383 254.000 0.000 1.000 Y NA
 838783 838784 CPS_0976 CPS_0977 glk2   FALSE 0.215 115.000 0.000 1.000 N NA
 838786 838787 CPS_0979 CPS_0980     TRUE 0.859 32.000 0.103 1.000   NA
 838789 838790 CPS_0982 CPS_0983 glk3   TRUE 0.970 4.000 0.000 1.000 Y NA
 838791 838792 CPS_0984 CPS_0985     TRUE 0.649 82.000 0.000 0.005 Y NA
 838793 838794 CPS_0986 CPS_0987     FALSE 0.043 413.000 0.000 1.000 N NA
 838794 838795 CPS_0987 CPS_0988     TRUE 0.940 164.000 0.667 1.000 N NA
 838795 838796 CPS_0988 CPS_0989     FALSE 0.058 326.000 0.000 NA   NA
 838796 838797 CPS_0989 CPS_0990     FALSE 0.175 105.000 0.000 NA   NA
 838799 838800 CPS_0992 CPS_0993     TRUE 0.569 201.000 0.154 NA   NA
 838800 838801 CPS_0993 CPS_0994     FALSE 0.013 562.000 0.000 1.000   NA
 838802 838803 CPS_0995 CPS_0996     FALSE 0.224 109.000 0.000 1.000 N NA
 838805 838806 CPS_0998 CPS_0999     TRUE 0.980 -7.000 0.176 NA   NA
 838808 838809 CPS_1001 CPS_1002     TRUE 0.744 -28.000 0.000 NA   NA
 838809 838810 CPS_1002 CPS_1003     FALSE 0.019 489.000 0.000 NA   NA
 838810 838811 CPS_1003 CPS_1004     FALSE 0.143 170.000 0.000 NA   NA
 838811 838812 CPS_1004 CPS_1005     TRUE 0.998 1.000 0.688 0.100 N NA
 838812 838813 CPS_1005 CPS_1006     TRUE 0.862 2.000 0.000 NA   NA
 838813 838814 CPS_1006 CPS_1007     FALSE 0.021 469.000 0.000 NA   NA
 838816 838817 CPS_1009 CPS_1010     FALSE 0.146 146.000 0.000 NA   NA
 838817 838818 CPS_1010 CPS_1011     TRUE 0.443 43.000 0.000 NA   NA
 838818 838819 CPS_1011 CPS_1012     FALSE 0.169 105.000 0.000 1.000   NA
 838819 838820 CPS_1012 CPS_1013     TRUE 0.998 -3.000 0.374 0.050 Y NA
 838820 838821 CPS_1013 CPS_1014     TRUE 0.993 -3.000 0.303 1.000 N NA
 838821 838822 CPS_1014 CPS_1015     FALSE 0.214 117.000 0.000 1.000 N NA
 838822 838823 CPS_1015 CPS_1016   plsC FALSE 0.195 161.000 0.000 1.000 N NA
 838823 838824 CPS_1016 CPS_1017 plsC   FALSE 0.319 301.000 0.121 NA   NA
 838824 838825 CPS_1017 CPS_1018     FALSE 0.143 167.000 0.000 NA   NA
 838827 838828 CPS_1020 CPS_1021 pgi1   FALSE 0.020 561.000 0.000 1.000 N NA
 838828 838829 CPS_1021 CPS_1022     TRUE 0.970 180.000 1.000 NA   NA
 838829 838830 CPS_1022 CPS_1023     TRUE 0.996 28.000 1.000 NA   NA
 838830 838831 CPS_1023 CPS_1024     TRUE 0.774 63.000 0.125 NA   NA
 838831 838832 CPS_1024 CPS_1025     FALSE 0.045 355.000 0.000 NA   NA
 838832 838833 CPS_1025 CPS_1026     FALSE 0.125 448.000 0.000 NA Y NA
 838833 838834 CPS_1026 CPS_1027   nagA TRUE 0.683 98.000 0.035 NA Y NA
 838834 838835 CPS_1027 CPS_1028 nagA   TRUE 0.667 107.000 0.047 1.000 Y NA
 838835 838836 CPS_1028 CPS_1029     FALSE 0.065 306.000 0.000 NA   NA
 838837 838838 CPS_1030 CPS_1031 ccmE ccmD TRUE 0.995 0.000 0.344 1.000 N NA
 838838 838839 CPS_1031 CPS_1032 ccmD ccmC TRUE 0.969 60.000 0.501 1.000 N NA
 838839 838840 CPS_1032 CPS_1033 ccmC ccmB TRUE 0.981 0.000 0.036 0.001 Y NA
 838840 838841 CPS_1033 CPS_1034 ccmB ccmA TRUE 0.897 38.000 0.050 0.002 Y NA
 838842 838843 CPS_1035 CPS_1036 ccmF dsbE TRUE 0.999 3.000 0.804 0.002 Y NA
 838843 838844 CPS_1036 CPS_1037 dsbE ccmH TRUE 0.995 2.000 0.196 NA Y NA
 838844 838845 CPS_1037 CPS_1038 ccmH   TRUE 0.591 98.000 0.000 NA Y NA
 838845 838846 CPS_1038 CPS_1039   hemH FALSE 0.015 679.000 0.000 1.000 N NA
 838846 838847 CPS_1039 CPS_1040 hemH dinB FALSE 0.224 109.000 0.000 1.000 N NA
 838847 838848 CPS_1040 CPS_1041 dinB   TRUE 0.661 20.000 0.000 NA   NA
 838848 838849 CPS_1041 CPS_1042   alaS FALSE 0.394 52.000 0.000 NA   NA
 838849 838850 CPS_1042 CPS_1043 alaS csrA FALSE 0.046 454.000 0.020 1.000 N NA
 838850 838851 CPS_1043 CPS_1044 csrA   FALSE 0.040 369.000 0.000 NA   NA
 838851 838852 CPS_1044 CPS_1045     FALSE 0.260 81.000 0.000 NA   NA
 838852 838853 CPS_1045 CPS_1046     FALSE 0.321 66.000 0.000 NA   NA
 838853 838854 CPS_1046 CPS_1047     FALSE 0.146 145.000 0.000 NA   NA
 838854 838855 CPS_1047 CPS_1048   oadG FALSE 0.008 1261.000 0.000 NA   NA
 838855 838856 CPS_1048 CPS_1049 oadG oadA TRUE 0.983 66.000 0.810 0.001   NA
 838856 838857 CPS_1049 CPS_1050 oadA oadB TRUE 1.000 9.000 0.976 0.001 Y NA
 838857 838858 CPS_1050 CPS_1051 oadB   FALSE 0.286 76.000 0.000 NA   NA
 838858 838859 CPS_1051 CPS_1052     FALSE 0.108 242.000 0.000 NA   NA
 838860 838861 CPS_1053 CPS_1054 pdxH   FALSE 0.162 111.000 0.000 NA   NA
 838861 838862 CPS_1054 CPS_1055   napC FALSE 0.012 596.000 0.000 NA   NA
 838862 838863 CPS_1055 CPS_1056 napC napB TRUE 0.991 9.000 0.143 1.000 Y NA
 838863 838864 CPS_1056 CPS_1057 napB napA TRUE 0.999 10.000 0.643 0.001 Y NA
 838864 838865 CPS_1057 CPS_1058 napA napD TRUE 0.459 57.000 0.000 NA N NA
 838865 838866 CPS_1058 CPS_1059 napD napF TRUE 0.762 20.000 0.023 NA   NA
 838866 838867 CPS_1059 CPS_1060 napF napE TRUE 0.947 5.000 0.058 NA   NA
 838869 838870 CPS_1062 CPS_1063     TRUE 0.754 -22.000 0.000 NA   NA
 838870 838871 CPS_1063 CPS_1064     TRUE 0.704 -91.000 0.000 NA   NA
 838871 838872 CPS_1064 CPS_1065     FALSE 0.088 268.000 0.000 NA   NA
 838873 838874 CPS_1066 CPS_1067     TRUE 0.986 33.000 0.344 0.099 Y NA
 838874 838875 CPS_1067 CPS_1068     FALSE 0.192 192.000 0.000 NA N NA
 838875 838876 CPS_1068 CPS_1069     TRUE 0.443 43.000 0.000 NA   NA
 838876 838877 CPS_1069 CPS_1070     TRUE 0.735 -33.000 0.000 NA   NA
 838877 838878 CPS_1070 CPS_1071     TRUE 0.716 -67.000 0.000 NA   NA
 838878 838879 CPS_1071 CPS_1072   ispD TRUE 0.956 24.000 0.185 1.000 N NA
 838879 838880 CPS_1072 CPS_1073 ispD ispF TRUE 0.975 71.000 0.419 1.000 Y NA
 838880 838881 CPS_1073 CPS_1074 ispF   TRUE 0.845 57.000 0.173 1.000   NA
 838881 838882 CPS_1074 CPS_1075   surE TRUE 0.989 4.000 0.235 1.000   NA
 838882 838883 CPS_1075 CPS_1076 surE pcm TRUE 0.983 19.000 0.353 1.000   NA
 838883 838884 CPS_1076 CPS_1077 pcm   TRUE 0.953 0.000 0.055 NA   NA
 838884 838885 CPS_1077 CPS_1078     TRUE 0.531 85.000 0.067 NA   NA
 838885 838886 CPS_1078 CPS_1079   rpoS TRUE 0.684 110.000 0.169 1.000 N NA
 838886 838887 CPS_1079 CPS_1080 rpoS nqrA FALSE 0.025 516.000 0.000 1.000 N NA
 838887 838888 CPS_1080 CPS_1081 nqrA nqrB TRUE 0.987 3.000 0.083 0.002 Y NA
 838888 838889 CPS_1081 CPS_1082 nqrB nqrC TRUE 0.996 -7.000 0.324 0.002 Y NA
 838889 838890 CPS_1082 CPS_1083 nqrC nqrD TRUE 0.997 0.000 0.312 0.002 Y NA
 838890 838891 CPS_1083 CPS_1084 nqrD nqrE TRUE 0.973 3.000 0.014 0.002 Y NA
 838891 838892 CPS_1084 CPS_1085 nqrE nqrF TRUE 0.817 63.000 0.043 0.002 Y NA
 838892 838893 CPS_1085 CPS_1086 nqrF apbE TRUE 0.876 246.000 0.519 1.000 N NA
 838893 838894 CPS_1086 CPS_1087 apbE   TRUE 0.886 134.000 0.481 NA   NA
 838895 838896 CPS_1088 CPS_1089 dxs ispA TRUE 0.961 55.000 0.246 1.000 Y NA
 838896 838897 CPS_1089 CPS_1090 ispA xseB TRUE 0.987 0.000 0.177 1.000 N NA
 838897 838898 CPS_1090 CPS_1091 xseB   FALSE 0.083 277.000 0.000 NA   NA
 838899 838900 CPS_1092 CPS_1093     TRUE 0.991 45.000 0.566 1.000 Y NA
 838900 838901 CPS_1093 CPS_1094   thiI FALSE 0.190 274.000 0.029 1.000 N NA
 838902 838903 CPS_1095 CPS_1096 panE   FALSE 0.362 99.000 0.038 NA   NA
 838903 838904 CPS_1096 CPS_1097     TRUE 0.747 14.000 0.000 NA   NA
 838905 838906 CPS_1098 CPS_1099     FALSE 0.142 174.000 0.000 NA   NA
 838906 838907 CPS_1099 CPS_1100   metA FALSE 0.024 538.000 0.000 NA N NA
 838907 838908 CPS_1100 CPS_1101 metA metH TRUE 0.602 95.000 0.006 1.000 Y NA
 838908 838909 CPS_1101 CPS_1102 metH   FALSE 0.149 128.000 0.000 NA   NA
 838910 838911 CPS_1103 CPS_1104 yfiA1   FALSE 0.074 341.000 0.000 NA N NA
 838911 838912 CPS_1104 CPS_1105     FALSE 0.131 249.000 0.000 0.039 N NA
 838916 838917 CPS_1109 CPS_1110   argS FALSE 0.111 286.000 0.000 NA N NA
 838917 838918 CPS_1110 CPS_1111 argS prfC FALSE 0.230 338.000 0.006 0.039 Y NA
 838920 838921 CPS_1113 CPS_1114   rimI FALSE 0.137 191.000 0.000 NA   NA
 838921 838922 CPS_1114 CPS_1115 rimI   TRUE 0.949 14.000 0.121 1.000   NA
 838922 838923 CPS_1115 CPS_1116     FALSE 0.135 201.000 0.000 NA   NA
 838926 838927 CPS_1119 CPS_1120 queA tgt TRUE 0.965 75.000 0.360 0.001 Y NA
 838927 838928 CPS_1120 CPS_1121 tgt yajC TRUE 0.817 192.000 0.325 NA N NA
 838928 838929 CPS_1121 CPS_1122 yajC secD TRUE 0.485 204.000 0.009 NA Y NA
 838929 838930 CPS_1122 CPS_1123 secD secF TRUE 0.944 21.000 0.045 0.001 Y NA
 838936 838937 CPS_1129 CPS_1130   cysE TRUE 0.929 39.000 0.208 1.000 N NA
 838937 838938 CPS_1130 CPS_1131 cysE   TRUE 0.637 285.000 0.271 1.000 N NA
 838938 838939 CPS_1131 CPS_1132   iscS TRUE 0.967 49.000 0.424 1.000 N NA
 838939 838940 CPS_1132 CPS_1133 iscS iscU TRUE 0.910 103.000 0.448 1.000 N NA
 838940 838941 CPS_1133 CPS_1134 iscU   TRUE 0.990 12.000 0.359 0.001   NA
 838941 838942 CPS_1134 CPS_1135   hscB TRUE 0.886 184.000 0.500 1.000   NA
 838942 838943 CPS_1135 CPS_1136 hscB hscA TRUE 0.981 90.000 0.634 1.000 Y NA
 838943 838944 CPS_1136 CPS_1137 hscA   TRUE 0.985 69.000 0.794 1.000 N NA
 838944 838945 CPS_1137 CPS_1138     FALSE 0.041 420.000 0.000 1.000 N NA
 838945 838946 CPS_1138 CPS_1139     FALSE 0.155 402.000 0.000 0.018 Y NA
 838947 838948 CPS_1140 CPS_1141     TRUE 0.854 -3.000 0.000 NA   NA
 838948 838949 CPS_1141 CPS_1142   cobC TRUE 0.437 44.000 0.000 NA   NA
 838949 838950 CPS_1142 CPS_1143 cobC   TRUE 0.954 70.000 0.463 0.005 N NA
 838950 838951 CPS_1143 CPS_1144     FALSE 0.405 94.000 0.029 1.000 N NA
 838951 838952 CPS_1144 CPS_1145     FALSE 0.125 221.000 0.000 NA   NA
 838953 838954 CPS_1146 CPS_1147   cobB FALSE 0.146 135.000 0.000 NA   NA
 838954 838955 CPS_1147 CPS_1148 cobB cobO1 FALSE 0.220 424.000 0.054 0.005 Y NA
 838955 838956 CPS_1148 CPS_1149 cobO1   TRUE 0.800 -10.000 0.000 NA   NA
 838956 838957 CPS_1149 CPS_1150     FALSE 0.043 360.000 0.000 NA   NA
 838958 838959 CPS_1151 CPS_1152 metE   TRUE 0.970 92.000 0.775 NA   NA
 838961 838962 CPS_1154 CPS_1155     FALSE 0.027 492.000 0.000 1.000 N NA
 838964 838965 CPS_1157 CPS_1158     FALSE 0.256 82.000 0.000 NA   NA
 838965 838966 CPS_1158 CPS_1159     TRUE 0.857 3.000 0.000 NA   NA
 838966 838967 CPS_1159 CPS_1160     TRUE 0.998 -3.000 0.684 NA   NA
 838969 838970 CPS_1162 CPS_1163 btuB   FALSE 0.027 489.000 0.000 1.000 N NA
 838970 838971 CPS_1163 CPS_1164   cobO2 FALSE 0.386 82.000 0.014 1.000 N NA
 838971 838972 CPS_1164 CPS_1165 cobO2   TRUE 0.450 57.000 0.000 1.000 N NA
 838972 838973 CPS_1165 CPS_1166     TRUE 0.998 -7.000 0.500 1.000 Y NA
 838974 838975 CPS_1167 CPS_1168 bfr1 bfr2 TRUE 0.997 10.000 0.396 0.001 Y NA
 838976 838977 CPS_1169 CPS_1170   pepO FALSE 0.086 320.000 0.000 NA N NA
 838977 838978 CPS_1170 CPS_1171 pepO   FALSE 0.050 337.000 0.000 1.000   NA
 838979 838980 CPS_1172 CPS_1173     TRUE 0.954 218.000 0.800 1.000 N NA
 838981 838982 CPS_1174 CPS_1175     FALSE 0.299 66.000 0.007 0.067   NA
 838983 838984 CPS_1176 CPS_1177     FALSE 0.014 563.000 0.000 NA   NA
 838985 838986 CPS_1178 CPS_1179   rpsT FALSE 0.106 240.000 0.000 1.000   NA
 838987 838988 CPS_1180 CPS_1181 mviN ribF FALSE 0.220 417.000 0.169 1.000   NA
 838988 838989 CPS_1181 CPS_1182 ribF ileS TRUE 0.789 113.000 0.254 1.000 N NA
 838989 838990 CPS_1182 CPS_1183 ileS lspA TRUE 0.620 131.000 0.147 1.000 N NA
 838990 838991 CPS_1183 CPS_1184 lspA fkbP TRUE 0.935 81.000 0.417 1.000 N NA
 838991 838992 CPS_1184 CPS_1185 fkbP   TRUE 0.488 169.000 0.000 1.000 Y NA
 838992 838993 CPS_1185 CPS_1186     TRUE 0.423 39.000 0.000 0.038   NA
 838993 838994 CPS_1186 CPS_1187     TRUE 0.420 45.000 0.000 1.000   NA
 838997 838998 CPS_1190 CPS_1191     TRUE 0.831 9.000 0.000 NA   NA
 838999 839000 CPS_1192 CPS_1193   sohB TRUE 0.484 186.000 0.114 1.000   NA
 839005 839006 CPS_1198 CPS_1199     FALSE 0.353 59.000 0.000 NA   NA
 839008 839009 CPS_1201 CPS_1202   yegQ TRUE 0.807 40.000 0.093 1.000   NA
 839011 839012 CPS_1204 CPS_1205 rdgC   FALSE 0.077 334.000 0.000 1.000 N NA
 839015 839016 CPS_1208 CPS_1209 phoB phoR TRUE 0.988 39.000 0.453 1.000 Y NA
 839016 839017 CPS_1209 CPS_1210 phoR   TRUE 0.654 145.000 0.168 1.000 N NA
 839017 839018 CPS_1210 CPS_1211   ispH FALSE 0.176 216.000 0.000 1.000 N NA
 839018 839019 CPS_1211 CPS_1212 ispH   FALSE 0.388 53.000 0.000 NA   NA
 839019 839020 CPS_1212 CPS_1213   pilV FALSE 0.037 381.000 0.000 NA   NA
 839020 839021 CPS_1213 CPS_1214 pilV   TRUE 0.873 273.000 0.630 NA   NA
 839021 839022 CPS_1214 CPS_1215     TRUE 0.994 5.000 0.348 NA   NA
 839022 839023 CPS_1215 CPS_1216     TRUE 0.973 37.000 0.438 NA   NA
 839023 839024 CPS_1216 CPS_1217   pilE TRUE 0.995 0.000 0.200 1.000 Y NA
 839024 839025 CPS_1217 CPS_1218 pilE   TRUE 0.857 3.000 0.000 NA   NA
 839028 839029 CPS_1221 CPS_1222 pheA   FALSE 0.168 108.000 0.000 NA   NA
 839029 839030 CPS_1222 CPS_1223     FALSE 0.388 53.000 0.000 NA   NA
 839033 839034 CPS_1226 CPS_1227     FALSE 0.129 215.000 0.000 NA   NA
 839035 839036 CPS_1228 CPS_1229 glcB   FALSE 0.017 623.000 0.000 NA N NA
 839036 839037 CPS_1229 CPS_1230     TRUE 0.966 0.000 0.082 NA   NA
 839037 839038 CPS_1230 CPS_1231     TRUE 0.832 7.000 0.000 1.000   NA
 839040 839041 CPS_1233 CPS_1234     FALSE 0.310 294.000 0.000 NA Y NA
 839041 839042 CPS_1234 CPS_1235     TRUE 0.996 -3.000 0.449 NA N NA
 839042 839043 CPS_1235 CPS_1236     TRUE 0.544 43.000 0.000 NA N NA
 839044 839045 CPS_1237 CPS_1238     TRUE 0.643 42.000 0.035 NA   NA
 839045 839046 CPS_1238 CPS_1239     TRUE 0.500 51.000 0.000 NA N NA
 839047 839048 CPS_1240 CPS_1241 lysA   FALSE 0.192 100.000 0.000 NA   NA
 839052 839053 CPS_1245 CPS_1246     FALSE 0.335 63.000 0.000 NA   NA
 839055 839056 CPS_1248 CPS_1249     TRUE 0.998 0.000 0.671 0.097 N NA
 839056 839057 CPS_1249 CPS_1250     TRUE 0.999 -3.000 0.752 NA Y NA
 839057 839058 CPS_1250 CPS_1251     FALSE 0.205 136.000 0.000 NA N NA
 839058 839059 CPS_1251 CPS_1252     TRUE 0.821 103.000 0.263 NA N NA
 839059 839060 CPS_1252 CPS_1253   gshB TRUE 0.962 13.000 0.120 NA N NA
 839060 839061 CPS_1253 CPS_1254 gshB   TRUE 0.452 285.000 0.173 NA   NA
 839063 839064 CPS_1256 CPS_1257 metK murI FALSE 0.184 182.000 0.004 1.000 N NA
 839066 839067 CPS_1259 CPS_1260     FALSE 0.196 368.000 0.000 1.000 Y NA
 839067 839068 CPS_1260 CPS_1261     TRUE 0.991 16.000 0.263 0.031 Y NA
 839069 839070 CPS_1262 CPS_1263     FALSE 0.009 1059.000 0.000 NA   NA
 839070 839071 CPS_1263 CPS_1264     TRUE 0.544 31.000 0.000 NA   NA
 839071 839072 CPS_1264 CPS_1265     TRUE 0.790 358.000 0.400 NA Y NA
 839072 839073 CPS_1265 CPS_1266     TRUE 0.991 3.000 0.125 NA Y NA
 839073 839074 CPS_1266 CPS_1267     FALSE 0.193 178.000 0.000 1.000 N NA
 839076 839077 CPS_1269 CPS_1270     TRUE 0.807 11.000 0.000 NA   NA
 839077 839078 CPS_1270 CPS_1271   pepP FALSE 0.181 103.000 0.000 NA   NA
 839078 839079 CPS_1271 CPS_1272 pepP ubiH FALSE 0.189 187.000 0.000 1.000 N NA
 839079 839080 CPS_1272 CPS_1273 ubiH   TRUE 0.963 97.000 0.474 0.001 Y NA
 839080 839081 CPS_1273 CPS_1274   gcvT1 FALSE 0.016 621.000 0.004 1.000 N NA
 839081 839082 CPS_1274 CPS_1275 gcvT1 gcvH1 TRUE 0.905 132.000 0.317 0.003 Y NA
 839082 839083 CPS_1275 CPS_1276 gcvH1 gcvP1 TRUE 0.773 288.000 0.249 1.000 Y NA
 839083 839084 CPS_1276 CPS_1277 gcvP1   TRUE 0.422 236.000 0.000 1.000 Y NA
 839084 839085 CPS_1277 CPS_1278     FALSE 0.138 164.000 0.000 1.000   NA
 839085 839086 CPS_1278 CPS_1279     FALSE 0.009 775.000 0.000 NA   NA
 839087 839088 CPS_1280 CPS_1281     FALSE 0.321 66.000 0.000 NA   NA
 839091 839092 CPS_1284 CPS_1285     FALSE 0.134 203.000 0.000 NA   NA
 839092 839093 CPS_1285 CPS_1286     FALSE 0.056 331.000 0.000 NA   NA
 839094 839095 CPS_1287 CPS_1288     FALSE 0.010 664.000 0.000 1.000   NA
 839095 839096 CPS_1288 CPS_1289     FALSE 0.023 539.000 0.000 1.000 N NA
 839096 839097 CPS_1289 CPS_1290     TRUE 0.962 45.000 0.409 0.051   NA
 839097 839098 CPS_1290 CPS_1291     FALSE 0.139 152.000 0.000 1.000   NA
 839100 839101 CPS_1293 CPS_1294     FALSE 0.147 139.000 0.000 NA   NA
 839101 839102 CPS_1294 CPS_1295     FALSE 0.064 308.000 0.000 NA   NA
 839106 839107 CPS_1299 CPS_1300     FALSE 0.252 83.000 0.000 NA   NA
 839108 839109 CPS_1301 CPS_1302     FALSE 0.014 566.000 0.000 NA   NA
 839113 839114 CPS_1306 CPS_1307     TRUE 0.937 10.000 0.057 NA   NA
 839115 839116 CPS_1308 CPS_1309     TRUE 0.430 45.000 0.000 NA   NA
 839116 839117 CPS_1309 CPS_1310     FALSE 0.134 204.000 0.000 NA   NA
 839119 839120 CPS_1312 CPS_1313 argJ dnaK1 FALSE 0.017 609.000 0.000 1.000 N NA
 839120 839121 CPS_1313 CPS_1314 dnaK1   TRUE 0.430 45.000 0.000 NA   NA
 839123 839124 CPS_1316 CPS_1317     FALSE 0.339 81.000 0.000 1.000 N NA
 839126 839127 CPS_1319 CPS_1320     TRUE 0.854 -3.000 0.000 NA   NA
 839128 839129 CPS_1321 CPS_1322     TRUE 0.957 57.000 0.444 1.000   NA
 839134 839135 CPS_1327 CPS_1328     FALSE 0.143 155.000 0.000 NA   NA
 839135 839136 CPS_1328 CPS_1329     FALSE 0.318 67.000 0.000 NA   NA
 839136 839137 CPS_1329 CPS_1330     FALSE 0.133 207.000 0.000 NA   NA
 839137 839138 CPS_1330 CPS_1331     FALSE 0.150 127.000 0.000 NA   NA
 839139 839140 CPS_1332 CPS_1333 betI1 betB1 TRUE 0.995 -9.000 0.459 1.000 N NA
 839140 839141 CPS_1333 CPS_1334 betB1 betA1 TRUE 0.936 130.000 0.634 1.000 N NA
 839141 839142 CPS_1334 CPS_1335 betA1   FALSE 0.216 239.000 0.024 1.000 N NA
 839142 839143 CPS_1335 CPS_1336     TRUE 0.960 37.000 0.333 NA   NA
 839143 839144 CPS_1336 CPS_1337     TRUE 0.665 50.000 0.049 NA   NA
 839144 839145 CPS_1337 CPS_1338     FALSE 0.144 247.000 0.000 1.000 N NA
 839145 839146 CPS_1338 CPS_1339     FALSE 0.080 277.000 0.000 1.000   NA
 839146 839147 CPS_1339 CPS_1340     FALSE 0.178 104.000 0.000 NA   NA
 839147 839148 CPS_1340 CPS_1341     FALSE 0.146 146.000 0.000 NA   NA
 839148 839149 CPS_1341 CPS_1342     TRUE 0.993 46.000 1.000 NA   NA
 839150 839151 CPS_1343 CPS_1344   katG TRUE 0.510 145.000 0.014 0.012 Y NA
 839152 839153 CPS_1345 CPS_1346     FALSE 0.148 130.000 0.000 NA   NA
 839153 839154 CPS_1346 CPS_1347     FALSE 0.036 442.000 0.000 1.000 N NA
 839155 839156 CPS_1348 CPS_1349     FALSE 0.044 353.000 0.000 1.000   NA
 839156 839157 CPS_1349 CPS_1350     FALSE 0.405 50.000 0.000 NA   NA
 839157 839158 CPS_1350 CPS_1351     FALSE 0.279 77.000 0.000 NA   NA
 839159 839160 CPS_1352 CPS_1353     FALSE 0.017 518.000 0.000 NA   NA
 839160 839161 CPS_1353 CPS_1354     FALSE 0.015 554.000 0.000 NA   NA
 839162 839163 CPS_1355 CPS_1356     TRUE 0.999 12.000 0.945 1.000 N NA
 839164 839165 CPS_1357 CPS_1358     FALSE 0.150 127.000 0.000 NA   NA
 839165 839166 CPS_1358 CPS_1359   add1 FALSE 0.081 327.000 0.000 1.000 N NA
 839167 839168 CPS_1360 CPS_1361     TRUE 0.466 39.000 0.000 NA   NA
 839168 839169 CPS_1361 CPS_1362     FALSE 0.178 104.000 0.000 NA   NA
 839169 839170 CPS_1362 CPS_1363     FALSE 0.151 125.000 0.000 NA   NA
 839171 839172 CPS_1364 CPS_1365     FALSE 0.135 201.000 0.000 NA   NA
 839172 839173 CPS_1365 CPS_1366     FALSE 0.024 442.000 0.000 1.000   NA
 839173 839174 CPS_1366 CPS_1367     FALSE 0.038 378.000 0.000 NA   NA
 839174 839175 CPS_1367 CPS_1368     FALSE 0.155 119.000 0.000 NA   NA
 839175 839176 CPS_1368 CPS_1369     TRUE 0.697 -118.000 0.000 NA   NA
 839176 839177 CPS_1369 CPS_1370     TRUE 0.700 -103.000 0.000 NA   NA
 839179 839180 CPS_1372 CPS_1373     TRUE 0.994 -7.000 0.387 NA   NA
 839180 839181 CPS_1373 CPS_1374     TRUE 0.994 -7.000 0.395 NA   NA
 839181 839182 CPS_1374 CPS_1375     FALSE 0.026 435.000 0.000 NA   NA
 839182 839183 CPS_1375 CPS_1376     FALSE 0.022 458.000 0.000 1.000   NA
 839183 839184 CPS_1376 CPS_1377     FALSE 0.406 139.000 0.077 1.000   NA
 839184 839185 CPS_1377 CPS_1378     TRUE 0.999 -7.000 0.898 NA N NA
 839185 839186 CPS_1378 CPS_1379     TRUE 0.699 67.000 0.092 NA   NA
 839186 839187 CPS_1379 CPS_1380   phrB FALSE 0.331 110.000 0.042 NA   NA
 839187 839188 CPS_1380 CPS_1381 phrB   FALSE 0.352 113.000 0.048 NA   NA
 839188 839189 CPS_1381 CPS_1382     TRUE 0.997 0.000 0.533 NA   NA
 839189 839190 CPS_1382 CPS_1383     TRUE 0.987 -3.000 0.217 0.034   NA
 839190 839191 CPS_1383 CPS_1384     TRUE 0.997 -13.000 0.722 NA   NA
 839191 839192 CPS_1384 CPS_1385   cfa TRUE 0.815 112.000 0.311 NA   NA
 839194 839195 CPS_1387 CPS_1388   phoP TRUE 0.985 28.000 0.500 1.000   NA
 839195 839196 CPS_1388 CPS_1389 phoP phoQ TRUE 0.994 27.000 0.476 1.000 Y NA
 839197 839198 CPS_1390 CPS_1391     FALSE 0.223 91.000 0.000 NA   NA
 839199 839200 CPS_1392 CPS_1393     FALSE 0.184 102.000 0.000 NA   NA
 839204 839205 CPS_1397 CPS_1398     FALSE 0.064 309.000 0.000 NA   NA
 839205 839206 CPS_1398 CPS_1399     TRUE 0.761 -19.000 0.000 NA   NA
 839206 839207 CPS_1399 CPS_1400     FALSE 0.147 131.000 0.000 NA   NA
 839208 839209 CPS_1401 CPS_1402     FALSE 0.143 159.000 0.000 NA   NA
 839209 839210 CPS_1402 CPS_1403     TRUE 0.999 -3.000 0.827 NA Y NA
 839210 839211 CPS_1403 CPS_1404     TRUE 0.530 111.000 0.000 NA Y NA
 839212 839213 CPS_1405 CPS_1406     TRUE 0.996 -3.000 0.263 0.030 Y NA
 839217 839218 CPS_1410 CPS_1411     FALSE 0.160 237.000 0.000 NA N NA
 839223 839224 CPS_1416 CPS_1417     FALSE 0.090 265.000 0.000 NA   NA
 839229 839230 CPS_1422 CPS_1423     FALSE 0.028 423.000 0.000 NA   NA
 839230 839231 CPS_1423 CPS_1424     TRUE 0.769 13.000 0.000 NA   NA
 839231 839232 CPS_1424 CPS_1425     TRUE 0.772 -15.000 0.000 NA   NA
 839232 839233 CPS_1425 CPS_1426   rstA TRUE 0.769 13.000 0.000 NA   NA
 839233 839234 CPS_1426 CPS_1427 rstA rstB TRUE 0.996 62.000 1.000 1.000 Y NA
 839236 839237 CPS_1429 CPS_1430     FALSE 0.400 143.000 0.059 0.065 N NA
 839237 839238 CPS_1430 CPS_1431     TRUE 0.985 86.000 1.000 0.065 N NA
 839238 839239 CPS_1431 CPS_1432   mmsA2 TRUE 0.996 55.000 1.000 1.000 Y NA
 839239 839240 CPS_1432 CPS_1433 mmsA2   FALSE 0.195 168.000 0.000 1.000 N NA
 839243 839244 CPS_1436 CPS_1437 creA   FALSE 0.053 335.000 0.000 NA   NA
 839245 839246 CPS_1438 CPS_1439     FALSE 0.042 415.000 0.000 1.000 N NA
 839248 839249 CPS_1441 CPS_1442     TRUE 0.518 33.000 0.000 NA   NA
 839250 839251 CPS_1443 CPS_1444     TRUE 0.985 5.000 0.200 NA   NA
 839251 839252 CPS_1444 CPS_1445     TRUE 0.772 108.000 0.250 NA   NA
 839255 839256 CPS_1448 CPS_1449     FALSE 0.056 329.000 0.000 NA   NA
 839256 839257 CPS_1449 CPS_1450     TRUE 0.772 193.000 0.142 NA Y NA
 839257 839258 CPS_1450 CPS_1451   aldH TRUE 0.672 188.000 0.186 NA N NA
 839258 839259 CPS_1451 CPS_1452 aldH   FALSE 0.144 127.000 0.000 1.000   NA
 839259 839260 CPS_1452 CPS_1453     FALSE 0.290 73.000 0.000 1.000   NA
 839260 839261 CPS_1453 CPS_1454     TRUE 0.788 52.000 0.000 1.000 Y NA
 839261 839262 CPS_1454 CPS_1455     FALSE 0.264 320.000 0.000 1.000 Y NA
 839265 839266 CPS_1458 CPS_1459     FALSE 0.100 233.000 0.000 0.037   NA
 839271 839272 CPS_1464 CPS_1465   yeiP FALSE 0.012 609.000 0.000 NA   NA
 839276 839277 CPS_1469 CPS_1470     TRUE 0.849 85.000 0.260 NA   NA
 839278 839279 CPS_1471 CPS_1472   flgM TRUE 0.681 49.000 0.062 0.002   NA
 839279 839280 CPS_1472 CPS_1473 flgM   TRUE 0.835 168.000 0.371 NA   NA
 839281 839282 CPS_1474 CPS_1475 cheV   FALSE 0.153 122.000 0.000 NA   NA
 839282 839283 CPS_1475 CPS_1476   cheR FALSE 0.158 116.000 0.000 NA   NA
 839283 839284 CPS_1476 CPS_1477 cheR flgB TRUE 0.904 152.000 0.309 1.000 Y NA
 839284 839285 CPS_1477 CPS_1478 flgB flgC TRUE 1.000 3.000 0.889 0.003 Y NA
 839285 839286 CPS_1478 CPS_1479 flgC flgD TRUE 0.949 143.000 0.478 NA Y NA
 839286 839287 CPS_1479 CPS_1480 flgD flgE TRUE 0.971 106.000 0.875 NA   NA
 839287 839288 CPS_1480 CPS_1481 flgE flgF TRUE 0.897 223.000 0.594 0.003   NA
 839288 839289 CPS_1481 CPS_1482 flgF flgG TRUE 0.971 79.000 0.446 0.001 Y NA
 839289 839290 CPS_1482 CPS_1483 flgG flgH TRUE 0.997 36.000 0.909 0.005 Y NA
 839290 839291 CPS_1483 CPS_1484 flgH flgI TRUE 0.958 100.000 0.457 0.007 Y NA
 839291 839292 CPS_1484 CPS_1485 flgI flgJ TRUE 0.702 420.000 0.405 0.007 Y NA
 839292 839293 CPS_1485 CPS_1486 flgJ   TRUE 0.971 191.000 0.705 0.002 Y NA
 839293 839294 CPS_1486 CPS_1487   flgL TRUE 0.991 11.000 0.182 0.001 Y NA
 839294 839295 CPS_1487 CPS_1488 flgL   FALSE 0.372 251.000 0.000 0.001 Y NA
 839295 839296 CPS_1488 CPS_1489     FALSE 0.069 346.000 0.000 1.000 N NA
 839296 839297 CPS_1489 CPS_1490     FALSE 0.016 657.000 0.000 1.000 N NA
 839297 839298 CPS_1490 CPS_1491   flaG TRUE 0.498 191.000 0.011 NA Y NA
 839298 839299 CPS_1491 CPS_1492 flaG fliD TRUE 0.879 75.000 0.117 NA Y NA
 839299 839300 CPS_1492 CPS_1493 fliD   FALSE 0.143 162.000 0.000 NA   NA
 839301 839302 CPS_1494 CPS_1495     FALSE 0.329 64.000 0.000 NA   NA
 839302 839303 CPS_1495 CPS_1496   fliS TRUE 0.867 0.000 0.000 NA   NA
 839303 839304 CPS_1496 CPS_1497 fliS   FALSE 0.170 107.000 0.000 NA   NA
 839305 839306 CPS_1498 CPS_1499 flrA flrB TRUE 0.925 166.000 0.377 0.094 Y NA
 839306 839307 CPS_1499 CPS_1500 flrB flrC TRUE 0.999 -7.000 0.679 0.094 Y NA
 839307 839308 CPS_1500 CPS_1501 flrC fliE TRUE 0.873 211.000 0.446 1.000 N NA
 839308 839309 CPS_1501 CPS_1502 fliE fliF TRUE 0.980 234.000 0.910 0.005 Y NA
 839309 839310 CPS_1502 CPS_1503 fliF fliG TRUE 0.993 -7.000 0.189 0.005 Y NA
 839310 839311 CPS_1503 CPS_1504 fliG fliH TRUE 0.982 36.000 0.320 0.003 Y NA
 839311 839312 CPS_1504 CPS_1505 fliH fliI TRUE 0.947 69.000 0.248 0.003 Y NA
 839312 839313 CPS_1505 CPS_1506 fliI   TRUE 0.883 76.000 0.127 0.007 Y NA
 839313 839314 CPS_1506 CPS_1507     TRUE 0.787 177.000 0.317 0.005   NA
 839314 839315 CPS_1507 CPS_1508   fliL TRUE 0.641 141.000 0.182 1.000   NA
 839315 839316 CPS_1508 CPS_1509 fliL fliM TRUE 0.941 74.000 0.241 0.001 Y NA
 839316 839317 CPS_1509 CPS_1510 fliM fliN TRUE 0.995 42.000 0.741 0.001 Y NA
 839317 839318 CPS_1510 CPS_1511 fliN fliO TRUE 0.987 44.000 0.443 1.000 Y NA
 839318 839319 CPS_1511 CPS_1512 fliO fliP TRUE 0.838 92.000 0.122 1.000 Y NA
 839319 839320 CPS_1512 CPS_1513 fliP fliQ TRUE 0.990 64.000 0.702 0.012 Y NA
 839320 839321 CPS_1513 CPS_1514 fliQ fliR TRUE 0.995 38.000 0.719 0.002 Y NA
 839321 839322 CPS_1514 CPS_1515 fliR flhB TRUE 0.996 1.000 0.240 1.000 Y NA
 839322 839323 CPS_1515 CPS_1516 flhB flhA TRUE 0.844 147.000 0.205 0.012 Y NA
 839323 839324 CPS_1516 CPS_1517 flhA flhF TRUE 0.936 60.000 0.178 1.000 Y NA
 839324 839325 CPS_1517 CPS_1518 flhF flhG TRUE 0.927 47.000 0.241 0.015 N NA
 839325 839326 CPS_1518 CPS_1519 flhG fliA TRUE 0.978 40.000 0.482 1.000 N NA
 839326 839327 CPS_1519 CPS_1520 fliA cheY TRUE 0.814 108.000 0.283 0.093 N NA
 839327 839328 CPS_1520 CPS_1521 cheY cheZ TRUE 0.975 87.000 0.516 1.000 Y NA
 839328 839329 CPS_1521 CPS_1522 cheZ cheA TRUE 0.995 14.000 0.341 1.000 Y NA
 839329 839330 CPS_1522 CPS_1523 cheA cheB TRUE 0.950 84.000 0.327 0.010 Y NA
 839330 839331 CPS_1523 CPS_1524 cheB motA TRUE 0.991 -7.000 0.153 1.000 Y NA
 839331 839332 CPS_1524 CPS_1525 motA   TRUE 0.996 -3.000 0.248 0.058 Y NA
 839332 839333 CPS_1525 CPS_1526     TRUE 0.800 91.000 0.199 1.000 N NA
 839333 839334 CPS_1526 CPS_1527     TRUE 0.980 34.000 0.454 1.000 N NA
 839334 839335 CPS_1527 CPS_1528     TRUE 0.995 61.000 0.886 0.010 Y NA
 839335 839336 CPS_1528 CPS_1529     TRUE 0.949 125.000 0.743 NA   NA
 839336 839337 CPS_1529 CPS_1530     FALSE 0.145 150.000 0.000 NA   NA
 839337 839338 CPS_1530 CPS_1531   ribE2 FALSE 0.325 85.000 0.000 NA N NA
 839338 839339 CPS_1531 CPS_1532 ribE2 nusB TRUE 0.973 32.000 0.347 1.000 N NA
 839339 839340 CPS_1532 CPS_1533 nusB thiL TRUE 0.936 39.000 0.225 1.000 N NA
 839340 839341 CPS_1533 CPS_1534 thiL pgpA TRUE 0.918 45.000 0.206 1.000 N NA
 839341 839342 CPS_1534 CPS_1535 pgpA yfiA2 FALSE 0.045 410.000 0.000 NA N NA
 839342 839343 CPS_1535 CPS_1536 yfiA2   FALSE 0.038 439.000 0.000 NA N NA
 839343 839344 CPS_1536 CPS_1537     TRUE 0.981 15.000 0.250 1.000 N NA
 839345 839346 CPS_1538 CPS_1539     TRUE 0.416 48.000 0.000 NA   NA
 839347 839348 CPS_1540 CPS_1541 dbpA   FALSE 0.175 105.000 0.000 NA   NA
 839348 839349 CPS_1541 CPS_1542     FALSE 0.015 552.000 0.000 NA   NA
 839349 839350 CPS_1542 CPS_1543     FALSE 0.181 103.000 0.000 NA   NA
 839351 839352 CPS_1544 CPS_1545 serA rpiA FALSE 0.287 182.000 0.029 1.000 N NA
 839352 839353 CPS_1545 CPS_1546 rpiA   FALSE 0.143 170.000 0.000 NA   NA
 839353 839354 CPS_1546 CPS_1547     FALSE 0.066 303.000 0.000 NA   NA
 839354 839355 CPS_1547 CPS_1548   dapD FALSE 0.092 263.000 0.000 NA   NA
 839355 839356 CPS_1548 CPS_1549 dapD glnD FALSE 0.373 77.000 0.007 1.000 N NA
 839356 839357 CPS_1549 CPS_1550 glnD map FALSE 0.338 109.000 0.030 1.000 N NA
 839360 839361 CPS_1553 CPS_1554 rpsB tsf TRUE 0.977 135.000 0.748 1.000 Y NA
 839361 839362 CPS_1554 CPS_1555 tsf pyrH TRUE 0.420 513.000 0.416 1.000 N NA
 839362 839363 CPS_1555 CPS_1556 pyrH frr TRUE 0.970 77.000 0.626 1.000 N NA
 839363 839364 CPS_1556 CPS_1557 frr uppS TRUE 0.888 109.000 0.409 1.000 N NA
 839364 839365 CPS_1557 CPS_1558 uppS cdsA TRUE 0.950 101.000 0.400 1.000 Y NA
 839365 839366 CPS_1558 CPS_1559 cdsA dxr TRUE 0.981 49.000 0.372 1.000 Y NA
 839366 839367 CPS_1559 CPS_1560 dxr ecfE TRUE 0.998 2.000 0.568 1.000 N NA
 839367 839368 CPS_1560 CPS_1561 ecfE   FALSE 0.316 326.000 0.026 1.000 Y NA
 839368 839369 CPS_1561 CPS_1562     TRUE 0.764 109.000 0.104 1.000 Y NA
 839369 839370 CPS_1562 CPS_1563   lpxD TRUE 0.994 59.000 0.814 1.000 Y NA
 839370 839371 CPS_1563 CPS_1564 lpxD fabZ TRUE 0.961 131.000 0.796 1.000 N NA
 839371 839372 CPS_1564 CPS_1565 fabZ lpxA TRUE 0.989 62.000 0.850 1.000 N NA
 839372 839373 CPS_1565 CPS_1566 lpxA   TRUE 0.671 19.000 0.000 NA   NA
 839375 839376 CPS_1568 CPS_1569 lpxB rnhB TRUE 0.906 45.000 0.186 1.000 N NA
 839376 839377 CPS_1569 CPS_1570 rnhB dnaE TRUE 0.990 2.000 0.104 1.000 Y NA
 839377 839378 CPS_1570 CPS_1571 dnaE accA TRUE 0.569 137.000 0.122 1.000 N NA
 839378 839379 CPS_1571 CPS_1572 accA tilS TRUE 0.861 43.000 0.123 1.000 N NA
 839382 839383 CPS_1575 CPS_1576 fur   TRUE 0.625 174.000 0.156 1.000 N NA
 839383 839384 CPS_1576 CPS_1577     TRUE 0.984 28.000 0.473 1.000   NA
 839384 839385 CPS_1577 CPS_1578     TRUE 0.991 4.000 0.282 NA   NA
 839385 839386 CPS_1578 CPS_1579     FALSE 0.270 200.000 0.038 NA   NA
 839387 839388 CPS_1580 CPS_1581 seqA pgm TRUE 0.855 54.000 0.151 1.000 N NA
 839388 839389 CPS_1581 CPS_1582 pgm   FALSE 0.051 390.000 0.000 1.000 N NA
 839389 839390 CPS_1582 CPS_1583     TRUE 0.927 270.000 0.558 0.001 Y NA
 839390 839391 CPS_1583 CPS_1584     TRUE 0.973 30.000 0.188 0.065 Y NA
 839393 839394 CPS_1586 CPS_1587     FALSE 0.388 53.000 0.000 NA   NA
 839395 839396 CPS_1588 CPS_1589     TRUE 0.671 19.000 0.000 NA   NA
 839397 839398 CPS_1590 CPS_1591     TRUE 0.443 43.000 0.000 NA   NA
 839403 839404 CPS_1596 CPS_1597   dxnH FALSE 0.056 331.000 0.000 NA   NA
 839404 839405 CPS_1597 CPS_1598 dxnH dxnG TRUE 0.998 0.000 0.352 0.001 Y NA
 839405 839406 CPS_1598 CPS_1599 dxnG mvaB TRUE 0.567 120.000 0.120 0.065 N NA
 839406 839407 CPS_1599 CPS_1600 mvaB mccA TRUE 0.990 3.000 0.229 0.065 N NA
 839407 839408 CPS_1600 CPS_1601 mccA   TRUE 0.936 68.000 0.205 0.065 Y NA
 839408 839409 CPS_1601 CPS_1602   mccB TRUE 0.826 195.000 0.189 1.000 Y NA
 839409 839410 CPS_1602 CPS_1603 mccB ivd TRUE 0.768 334.000 0.316 1.000 Y NA
 839410 839411 CPS_1603 CPS_1604 ivd   TRUE 0.693 105.000 0.166 1.000 N NA
 839414 839415 CPS_1607 CPS_1608     TRUE 0.473 180.000 0.000 0.065 Y NA
 839415 839416 CPS_1608 CPS_1609   rrsH FALSE 0.010 715.000 0.000 NA   NA
 839416 839417 CPS_1609 CPS_1610 rrsH   FALSE 0.199 98.000 0.000 NA   NA
 839417 839418 CPS_1610 CPS_1611   rrlH FALSE 0.021 467.000 0.000 NA   NA
 839418 839419 CPS_1611 CPS_1612 rrlH rrfH FALSE 0.144 152.000 0.000 NA   NA
 839422 839423 CPS_1615 CPS_1616     FALSE 0.279 77.000 0.000 NA   NA
 839424 839425 CPS_1617 CPS_1618     FALSE 0.014 534.000 0.000 0.019   NA
 839427 839428 CPS_1620 CPS_1621     TRUE 0.474 179.000 0.000 0.092 Y NA
 839428 839429 CPS_1621 CPS_1622     TRUE 0.485 145.000 0.000 0.092 Y NA
 839431 839432 CPS_1624 CPS_1625     FALSE 0.148 130.000 0.000 NA   NA
 839433 839434 CPS_1626 CPS_1627     FALSE 0.143 165.000 0.000 NA   NA
 839436 839437 CPS_1629 CPS_1630     TRUE 0.693 -217.000 0.000 NA   NA
 839437 839438 CPS_1630 CPS_1631     TRUE 0.753 -19.000 0.000 1.000   NA
 839438 839439 CPS_1631 CPS_1632     TRUE 0.867 0.000 0.000 NA   NA
 839442 839443 CPS_1635 CPS_1636 umuD1 umuC1 TRUE 0.788 -12.000 0.000 NA   NA
 839443 839444 CPS_1636 CPS_1637 umuC1   FALSE 0.031 465.000 0.000 1.000 N NA
 839446 839447 CPS_1639 CPS_1640     FALSE 0.155 120.000 0.000 NA   NA
 839447 839448 CPS_1640 CPS_1641     FALSE 0.130 198.000 0.000 1.000   NA
 839448 839449 CPS_1641 CPS_1642     FALSE 0.147 140.000 0.000 NA   NA
 839449 839450 CPS_1642 CPS_1643     FALSE 0.310 69.000 0.000 NA   NA
 839452 839453 CPS_1645 CPS_1646     FALSE 0.090 266.000 0.000 NA   NA
 839453 839454 CPS_1646 CPS_1647     FALSE 0.034 396.000 0.000 NA   NA
 839454 839455 CPS_1647 CPS_1648     FALSE 0.162 111.000 0.000 NA   NA
 839455 839456 CPS_1648 CPS_1649     FALSE 0.150 127.000 0.000 NA   NA
 839456 839457 CPS_1649 CPS_1650     FALSE 0.133 206.000 0.000 NA   NA
 839457 839458 CPS_1650 CPS_1651     FALSE 0.035 395.000 0.000 NA   NA
 839458 839459 CPS_1651 CPS_1652     TRUE 0.776 108.000 0.259 1.000   NA
 839459 839460 CPS_1652 CPS_1653     TRUE 0.956 65.000 0.483 NA   NA
 839460 839461 CPS_1653 CPS_1654     TRUE 0.998 5.000 0.724 NA   NA
 839462 839463 CPS_1655 CPS_1656     TRUE 0.979 18.000 0.278 NA N NA
 839464 839465 CPS_1657 CPS_1658     FALSE 0.374 396.000 0.250 NA   NA
 839468 839469 CPS_1661 CPS_1662     FALSE 0.155 120.000 0.000 NA   NA
 839470 839471 CPS_1663 CPS_1664     TRUE 0.458 40.000 0.000 NA   NA
 839472 839473 CPS_1665 CPS_1666     FALSE 0.037 383.000 0.000 NA   NA
 839473 839474 CPS_1666 CPS_1667     FALSE 0.070 275.000 0.000 0.011   NA
 839474 839475 CPS_1667 CPS_1668     TRUE 0.531 32.000 0.000 NA   NA
 839475 839476 CPS_1668 CPS_1669     FALSE 0.306 70.000 0.000 NA   NA
 839478 839479 CPS_1671 CPS_1672     FALSE 0.010 725.000 0.000 NA   NA
 839480 839481 CPS_1673 CPS_1674     FALSE 0.367 56.000 0.000 NA   NA
 839482 839483 CPS_1675 CPS_1676     TRUE 0.768 -16.000 0.000 NA   NA
 839483 839484 CPS_1676 CPS_1677     TRUE 0.754 -22.000 0.000 NA   NA
 839484 839485 CPS_1677 CPS_1678     FALSE 0.141 179.000 0.000 NA   NA
 839485 839486 CPS_1678 CPS_1679   acpD1 FALSE 0.258 101.000 0.000 NA N NA
 839486 839487 CPS_1679 CPS_1680 acpD1   TRUE 0.623 88.000 0.000 0.033 Y NA
 839488 839489 CPS_1681 CPS_1682     FALSE 0.045 357.000 0.000 NA   NA
 839491 839492 CPS_1684 CPS_1685     FALSE 0.294 74.000 0.000 NA   NA
 839492 839493 CPS_1685 CPS_1686     TRUE 0.989 -69.000 0.429 0.049   NA
 839493 839494 CPS_1686 CPS_1687     FALSE 0.150 127.000 0.000 NA   NA
 839494 839495 CPS_1687 CPS_1688     FALSE 0.146 137.000 0.000 NA   NA
 839495 839496 CPS_1688 CPS_1689     FALSE 0.170 107.000 0.000 NA   NA
 839496 839497 CPS_1689 CPS_1690     FALSE 0.133 207.000 0.000 NA   NA
 839497 839498 CPS_1690 CPS_1691     FALSE 0.013 584.000 0.000 NA   NA
 839498 839499 CPS_1691 CPS_1692     FALSE 0.035 393.000 0.000 NA   NA
 839499 839500 CPS_1692 CPS_1693     FALSE 0.152 124.000 0.000 NA   NA
 839500 839501 CPS_1693 CPS_1694     TRUE 0.544 149.000 0.113 1.000 N NA
 839501 839502 CPS_1694 CPS_1695     FALSE 0.256 82.000 0.000 NA   NA
 839502 839503 CPS_1695 CPS_1696     FALSE 0.318 67.000 0.000 NA   NA
 839503 839504 CPS_1696 CPS_1697     FALSE 0.143 166.000 0.000 NA   NA
 839505 839506 CPS_1698 CPS_1699     FALSE 0.209 95.000 0.000 NA   NA
 839506 839507 CPS_1699 CPS_1700     FALSE 0.279 77.000 0.000 NA   NA
 839507 839508 CPS_1700 CPS_1701   rnhA FALSE 0.220 111.000 0.000 1.000 N NA
 839508 839509 CPS_1701 CPS_1702 rnhA   FALSE 0.034 396.000 0.000 NA   NA
 839510 839511 CPS_1703 CPS_1704     FALSE 0.206 94.000 0.000 1.000   NA
 839513 839514 CPS_1706 CPS_1707     TRUE 0.478 158.000 0.000 0.092 Y NA
 839515 839516 CPS_1708 CPS_1709   lipA FALSE 0.014 772.000 0.000 1.000 N NA
 839516 839517 CPS_1709 CPS_1710 lipA lipB TRUE 0.996 -7.000 0.319 0.001 Y NA
 839517 839518 CPS_1710 CPS_1711 lipB   TRUE 0.899 53.000 0.219 NA   NA
 839518 839519 CPS_1711 CPS_1712   dacA FALSE 0.217 154.000 0.024 NA   NA
 839519 839520 CPS_1712 CPS_1713 dacA   TRUE 0.680 197.000 0.080 NA Y NA
 839520 839521 CPS_1713 CPS_1714   rodA TRUE 0.587 72.000 0.043 NA N NA
 839521 839522 CPS_1714 CPS_1715 rodA   TRUE 0.920 0.000 0.013 1.000 N NA
 839522 839523 CPS_1715 CPS_1716     FALSE 0.398 60.000 0.012 NA   NA
 839523 839524 CPS_1716 CPS_1717     TRUE 0.770 211.000 0.307 NA   NA
 839524 839525 CPS_1717 CPS_1718   nadD FALSE 0.352 95.000 0.032 NA   NA
 839527 839528 CPS_1720 CPS_1721 holA   TRUE 0.830 82.000 0.199 NA N NA
 839528 839529 CPS_1721 CPS_1722   leuS TRUE 0.937 31.000 0.182 NA N NA
 839530 839531 CPS_1723 CPS_1724     FALSE 0.262 158.000 0.033 NA   NA
 839531 839532 CPS_1724 CPS_1725     FALSE 0.335 63.000 0.000 NA   NA
 839532 839533 CPS_1725 CPS_1726   deaD FALSE 0.028 423.000 0.000 NA   NA
 839533 839534 CPS_1726 CPS_1727 deaD   FALSE 0.111 234.000 0.000 1.000   NA
 839534 839535 CPS_1727 CPS_1728   tolQ TRUE 0.996 -10.000 0.593 1.000   NA
 839535 839536 CPS_1728 CPS_1729 tolQ tolR TRUE 0.998 10.000 0.556 0.056 Y NA
 839536 839537 CPS_1729 CPS_1730 tolR   TRUE 0.934 32.000 0.183 NA N NA
 839537 839538 CPS_1730 CPS_1731   tolB TRUE 0.500 132.000 0.089 NA N NA
 839538 839539 CPS_1731 CPS_1732 tolB pal TRUE 0.973 64.000 0.592 1.000 N NA
 839539 839540 CPS_1732 CPS_1733 pal   TRUE 0.919 54.000 0.278 1.000   NA
 839540 839541 CPS_1733 CPS_1734     FALSE 0.143 173.000 0.000 NA   NA
 839541 839542 CPS_1734 CPS_1735     FALSE 0.164 110.000 0.000 NA   NA
 839542 839543 CPS_1735 CPS_1736     TRUE 0.482 37.000 0.000 NA   NA
 839543 839544 CPS_1736 CPS_1737     FALSE 0.213 94.000 0.000 NA   NA
 839544 839545 CPS_1737 CPS_1738     TRUE 0.507 34.000 0.000 NA   NA
 839545 839546 CPS_1738 CPS_1739     FALSE 0.143 168.000 0.000 NA   NA
 839546 839547 CPS_1739 CPS_1740   nadA FALSE 0.027 426.000 0.000 NA   NA
 839549 839550 CPS_1742 CPS_1743     FALSE 0.058 326.000 0.000 NA   NA
 839555 839556 CPS_1748 CPS_1749   cpxA FALSE 0.031 404.000 0.000 1.000   NA
 839556 839557 CPS_1749 CPS_1750 cpxA cpxR TRUE 0.999 3.000 0.791 1.000 Y NA
 839559 839560 CPS_1752 CPS_1753 hpt   FALSE 0.145 126.000 0.000 1.000   NA
 839563 839564 CPS_1756 CPS_1757     FALSE 0.043 355.000 0.000 1.000   NA
 839564 839565 CPS_1757 CPS_1758     FALSE 0.175 105.000 0.000 NA   NA
 839565 839566 CPS_1758 CPS_1759     TRUE 0.475 38.000 0.000 NA   NA
 839568 839569 CPS_1761 CPS_1762     TRUE 0.430 45.000 0.000 NA   NA
 839569 839570 CPS_1762 CPS_1763     FALSE 0.146 135.000 0.000 NA   NA
 839570 839571 CPS_1763 CPS_1764     TRUE 0.791 19.000 0.028 NA   NA
 839571 839572 CPS_1764 CPS_1765     TRUE 0.442 41.000 0.000 1.000   NA
 839572 839573 CPS_1765 CPS_1766     FALSE 0.159 115.000 0.000 NA   NA
 839573 839574 CPS_1766 CPS_1767     FALSE 0.279 77.000 0.000 NA   NA
 839574 839575 CPS_1767 CPS_1768     FALSE 0.090 267.000 0.000 NA   NA
 839577 839578 CPS_1770 CPS_1771     FALSE 0.170 107.000 0.000 NA   NA
 839578 839579 CPS_1771 CPS_1772     FALSE 0.147 141.000 0.000 NA   NA
 839581 839582 CPS_1774 CPS_1775     FALSE 0.373 55.000 0.000 NA   NA
 839582 839583 CPS_1775 CPS_1776     FALSE 0.125 221.000 0.000 NA   NA
 839583 839584 CPS_1776 CPS_1777     FALSE 0.153 122.000 0.000 NA   NA
 839585 839586 CPS_1778 CPS_1779 nemA   TRUE 0.998 -3.000 0.667 NA   NA
 839587 839588 CPS_1780 CPS_1781     FALSE 0.037 377.000 0.000 1.000   NA
 839590 839591 CPS_1783 CPS_1784 pntA pntB1 TRUE 0.999 10.000 0.745 0.001 Y NA
 839591 839592 CPS_1784 CPS_1785 pntB1   FALSE 0.012 607.000 0.000 NA   NA
 839594 839595 CPS_1787 CPS_1788     FALSE 0.174 195.000 0.000 0.063 N NA
 839596 839597 CPS_1789 CPS_1790     FALSE 0.360 57.000 0.000 NA   NA
 839597 839598 CPS_1790 CPS_1791     TRUE 0.544 31.000 0.000 NA   NA
 839598 839599 CPS_1791 CPS_1792     TRUE 0.607 26.000 0.000 NA   NA
 839600 839601 CPS_1793 CPS_1794     TRUE 0.832 7.000 0.000 1.000   NA
 839601 839602 CPS_1794 CPS_1795     FALSE 0.412 42.000 0.000 0.091   NA
 839602 839603 CPS_1795 CPS_1796     FALSE 0.377 53.000 0.000 1.000   NA
 839603 839604 CPS_1796 CPS_1797     FALSE 0.020 478.000 0.000 NA   NA
 839604 839605 CPS_1797 CPS_1798     FALSE 0.388 53.000 0.000 NA   NA
 839605 839606 CPS_1798 CPS_1799     FALSE 0.125 221.000 0.000 NA   NA
 839606 839607 CPS_1799 CPS_1800     FALSE 0.143 170.000 0.000 NA   NA
 839608 839609 CPS_1801 CPS_1802     TRUE 0.489 36.000 0.000 NA   NA
 839609 839610 CPS_1802 CPS_1803   lepB2 FALSE 0.286 76.000 0.000 NA   NA
 839610 839611 CPS_1803 CPS_1804 lepB2   TRUE 0.862 0.000 0.000 1.000   NA
 839611 839612 CPS_1804 CPS_1805     TRUE 0.845 4.000 0.000 1.000   NA
 839613 839614 CPS_1806 CPS_1807     FALSE 0.388 53.000 0.000 NA   NA
 839614 839615 CPS_1807 CPS_1808     TRUE 0.865 1.000 0.000 NA   NA
 839615 839616 CPS_1808 CPS_1809     FALSE 0.137 191.000 0.000 NA   NA
 839619 839620 CPS_1812 CPS_1813     TRUE 0.982 -3.000 0.145 NA N NA
 839621 839622 CPS_1814 CPS_1815     FALSE 0.016 531.000 0.000 NA   NA
 839622 839623 CPS_1815 CPS_1816     TRUE 0.993 -3.000 0.333 NA   NA
 839623 839624 CPS_1816 CPS_1817     TRUE 0.738 28.000 0.031 NA   NA
 839624 839625 CPS_1817 CPS_1818     TRUE 0.639 53.000 0.047 NA   NA
 839626 839627 CPS_1819 CPS_1820     TRUE 0.535 105.000 0.000 0.029 Y NA
 839628 839629 CPS_1821 CPS_1822     FALSE 0.078 283.000 0.000 NA   NA
 839629 839630 CPS_1822 CPS_1823     FALSE 0.068 301.000 0.000 NA   NA
 839630 839631 CPS_1823 CPS_1824     TRUE 0.779 -13.000 0.000 NA   NA
 839631 839632 CPS_1824 CPS_1825     FALSE 0.184 102.000 0.000 NA   NA
 839638 839639 CPS_1831 CPS_1832 torE torC TRUE 0.943 61.000 0.379 NA   NA
 839639 839640 CPS_1832 CPS_1833 torC torA TRUE 0.999 16.000 1.000 0.052 Y NA
 839640 839641 CPS_1833 CPS_1834 torA torD TRUE 0.984 -3.000 0.185 0.052   NA
 839641 839642 CPS_1834 CPS_1835 torD   FALSE 0.012 589.000 0.000 1.000   NA
 839642 839643 CPS_1835 CPS_1836     TRUE 0.976 65.000 0.667 NA   NA
 839645 839646 CPS_1838 CPS_1839     FALSE 0.018 500.000 0.000 NA   NA
 839646 839647 CPS_1839 CPS_1840     TRUE 0.997 3.000 0.464 1.000 N NA
 839647 839648 CPS_1840 CPS_1841     TRUE 0.998 5.000 0.729 NA   NA
 839648 839649 CPS_1841 CPS_1842     TRUE 0.998 -3.000 0.743 NA   NA
 839649 839650 CPS_1842 CPS_1843     FALSE 0.240 86.000 0.000 NA   NA
 839651 839652 CPS_1844 CPS_1845     FALSE 0.165 109.000 0.000 NA   NA
 839652 839653 CPS_1845 CPS_1846     FALSE 0.115 234.000 0.000 NA   NA
 839655 839656 CPS_1848 CPS_1849     TRUE 0.999 0.000 0.800 NA N NA
 839656 839657 CPS_1849 CPS_1850     TRUE 0.581 168.000 0.036 0.017 Y NA
 839657 839658 CPS_1850 CPS_1851     FALSE 0.337 129.000 0.036 1.000 N NA
 839658 839659 CPS_1851 CPS_1852   exbD1 TRUE 0.994 32.000 0.577 0.046 Y NA
 839659 839660 CPS_1852 CPS_1853 exbD1 exbB1 TRUE 0.993 11.000 0.211 0.055 Y NA
 839660 839661 CPS_1853 CPS_1854 exbB1   FALSE 0.300 90.000 0.000 1.000 N NA
 839662 839663 CPS_1855 CPS_1856     TRUE 0.999 5.000 0.848 NA   NA
 839663 839664 CPS_1856 CPS_1857     FALSE 0.146 148.000 0.000 NA   NA
 839664 839665 CPS_1857 CPS_1858   hugA TRUE 0.499 144.000 0.000 NA Y NA
 839665 839666 CPS_1858 CPS_1859 hugA   FALSE 0.161 232.000 0.000 1.000 N NA
 839667 839668 CPS_1860 CPS_1861     FALSE 0.134 203.000 0.000 NA   NA
 839668 839669 CPS_1861 CPS_1862     FALSE 0.274 78.000 0.000 NA   NA
 839670 839671 CPS_1863 CPS_1864     TRUE 0.994 -7.000 0.222 NA Y NA
 839671 839672 CPS_1864 CPS_1865     TRUE 0.656 29.000 0.000 1.000 N NA
 839672 839673 CPS_1865 CPS_1866     TRUE 0.974 0.000 0.000 1.000 Y NA
 839673 839674 CPS_1866 CPS_1867     FALSE 0.143 162.000 0.000 NA   NA
 839674 839675 CPS_1867 CPS_1868   pfoR FALSE 0.011 669.000 0.000 NA   NA
 839675 839676 CPS_1868 CPS_1869 pfoR iadA FALSE 0.087 314.000 0.000 1.000 N NA
 839676 839677 CPS_1869 CPS_1870 iadA cphB TRUE 0.877 9.000 0.000 1.000 N NA
 839677 839678 CPS_1870 CPS_1871 cphB   TRUE 0.518 254.000 0.154 1.000 N NA
 839678 839679 CPS_1871 CPS_1872     TRUE 0.788 49.000 0.000 0.002 Y NA
 839683 839684 CPS_1876 CPS_1877 cydA cydB TRUE 0.999 11.000 0.714 0.052 Y NA
 839684 839685 CPS_1877 CPS_1878 cydB   TRUE 0.727 42.000 0.057 NA   NA
 839685 839686 CPS_1878 CPS_1879   cydD TRUE 0.681 52.000 0.057 NA   NA
 839686 839687 CPS_1879 CPS_1880 cydD   TRUE 0.986 -3.000 0.075 0.004 Y NA
 839687 839688 CPS_1880 CPS_1881     TRUE 0.556 30.000 0.000 NA   NA
 839689 839690 CPS_1882 CPS_1883     TRUE 0.997 -7.000 0.562 NA   NA
 839690 839691 CPS_1883 CPS_1884     FALSE 0.024 448.000 0.000 NA   NA
 839691 839692 CPS_1884 CPS_1885     TRUE 0.936 106.000 0.571 1.000 N NA
 839692 839693 CPS_1885 CPS_1886     TRUE 0.749 -25.000 0.000 NA   NA
 839693 839694 CPS_1886 CPS_1887   exaA FALSE 0.139 184.000 0.000 NA   NA
 839696 839697 CPS_1889 CPS_1890   exaB TRUE 0.998 -10.000 0.786 1.000 N NA
 839698 839699 CPS_1891 CPS_1892     TRUE 0.989 30.000 0.615 NA   NA
 839699 839700 CPS_1892 CPS_1893     TRUE 0.971 -30.000 0.189 NA   NA
 839700 839701 CPS_1893 CPS_1894     TRUE 0.998 0.000 0.635 0.090   NA
 839701 839702 CPS_1894 CPS_1895     FALSE 0.028 413.000 0.000 1.000   NA
 839702 839703 CPS_1895 CPS_1896     TRUE 0.825 9.000 0.000 1.000   NA
 839703 839704 CPS_1896 CPS_1897     FALSE 0.147 134.000 0.000 NA   NA
 839705 839706 CPS_1898 CPS_1899     FALSE 0.096 256.000 0.000 NA   NA
 839708 839709 CPS_1901 CPS_1902     FALSE 0.230 89.000 0.000 NA   NA
 839709 839710 CPS_1902 CPS_1903     FALSE 0.015 697.000 0.000 1.000 N NA
 839710 839711 CPS_1903 CPS_1904     FALSE 0.297 70.000 0.000 1.000   NA
 839711 839712 CPS_1904 CPS_1905     TRUE 0.531 32.000 0.000 NA   NA
 839712 839713 CPS_1905 CPS_1906     TRUE 0.487 53.000 0.000 NA N NA
 839716 839717 CPS_1909 CPS_1910     TRUE 0.991 -3.000 0.250 NA N NA
 839717 839718 CPS_1910 CPS_1911     FALSE 0.136 195.000 0.000 NA   NA
 839718 839719 CPS_1911 CPS_1912     FALSE 0.160 113.000 0.000 NA   NA
 839719 839720 CPS_1912 CPS_1913     FALSE 0.147 132.000 0.000 NA   NA
 839720 839721 CPS_1913 CPS_1914     FALSE 0.223 91.000 0.000 NA   NA
 839722 839723 CPS_1915 CPS_1916     TRUE 0.999 2.000 1.000 0.002 N NA
 839724 839725 CPS_1917 CPS_1918     FALSE 0.256 82.000 0.000 NA   NA
 839725 839726 CPS_1918 CPS_1919     TRUE 0.999 9.000 1.000 NA   NA
 839726 839727 CPS_1919 CPS_1920     FALSE 0.335 63.000 0.000 NA   NA
 839727 839728 CPS_1920 CPS_1921     TRUE 0.831 9.000 0.000 NA   NA
 839731 839732 CPS_1924 CPS_1925     FALSE 0.233 88.000 0.000 NA   NA
 839733 839734 CPS_1926 CPS_1927     TRUE 0.886 103.000 0.222 0.012 Y NA
 839734 839735 CPS_1927 CPS_1928     TRUE 0.798 50.000 0.000 NA Y NA
 839735 839736 CPS_1928 CPS_1929     TRUE 0.793 78.000 0.049 NA Y NA
 839736 839737 CPS_1929 CPS_1930     TRUE 0.999 -7.000 0.756 1.000 Y NA
 839737 839738 CPS_1930 CPS_1931     FALSE 0.028 418.000 0.000 1.000   NA
 839738 839739 CPS_1931 CPS_1932     FALSE 0.093 256.000 0.000 1.000   NA
 839739 839740 CPS_1932 CPS_1933     FALSE 0.356 268.000 0.000 1.000 Y NA
 839741 839742 CPS_1934 CPS_1935     FALSE 0.145 149.000 0.000 NA   NA
 839745 839746 CPS_1938 CPS_1939     TRUE 0.499 119.000 0.000 0.022 Y NA
 839746 839747 CPS_1939 CPS_1940     TRUE 0.956 -10.000 0.000 0.022 Y NA
 839748 839749 CPS_1941 CPS_1942     TRUE 0.567 29.000 0.000 NA   NA
 839749 839750 CPS_1942 CPS_1943   czcA TRUE 0.996 -7.000 0.514 NA   NA
 839750 839751 CPS_1943 CPS_1944 czcA   TRUE 0.992 1.000 0.286 NA   NA
 839752 839753 CPS_1945 CPS_1946     FALSE 0.143 162.000 0.000 NA   NA
 839753 839754 CPS_1946 CPS_1947     FALSE 0.054 334.000 0.000 NA   NA
 839754 839755 CPS_1947 CPS_1948     TRUE 0.855 2.000 0.004 NA   NA
 839756 839757 CPS_1949 CPS_1950     FALSE 0.017 501.000 0.000 1.000   NA
 839757 839758 CPS_1950 CPS_1951     TRUE 0.999 -3.000 0.774 1.000   NA
 839758 839759 CPS_1951 CPS_1952     TRUE 0.991 35.000 0.769 NA   NA
 839759 839760 CPS_1952 CPS_1953     TRUE 0.999 0.000 0.744 NA   NA
 839763 839764 CPS_1956 CPS_1957     FALSE 0.181 209.000 0.000 1.000 N NA
 839764 839765 CPS_1957 CPS_1958     TRUE 0.984 11.000 0.222 NA   NA
 839765 839766 CPS_1958 CPS_1959     TRUE 0.993 11.000 0.400 NA   NA
 839768 839769 CPS_1961 CPS_1962     TRUE 0.947 30.000 0.200 NA N NA
 839770 839771 CPS_1963 CPS_1964     TRUE 0.507 34.000 0.000 NA   NA
 839771 839772 CPS_1964 CPS_1965     TRUE 0.607 26.000 0.000 NA   NA
 839775 839776 CPS_1968 CPS_1969   cdd FALSE 0.185 199.000 0.000 1.000 N NA
 839776 839777 CPS_1969 CPS_1970 cdd deoA TRUE 0.964 12.000 0.023 1.000 Y NA
 839778 839779 CPS_1971 CPS_1972 tdk deoC TRUE 0.495 133.000 0.000 1.000 Y NA
 839779 839780 CPS_1972 CPS_1973 deoC   TRUE 0.797 54.000 0.014 1.000 Y NA
 839780 839781 CPS_1973 CPS_1974   udk TRUE 0.882 29.000 0.000 1.000 Y NA
 839781 839782 CPS_1974 CPS_1975 udk   TRUE 0.779 -13.000 0.000 NA   NA
 839783 839784 CPS_1976 CPS_1977 deoB   FALSE 0.195 163.000 0.000 1.000 N NA
 839785 839786 CPS_1978 CPS_1979 deoD add2 FALSE 0.396 248.000 0.000 1.000 Y NA
 839786 839787 CPS_1979 CPS_1980 add2   FALSE 0.152 117.000 0.000 1.000   NA
 839787 839788 CPS_1980 CPS_1981     FALSE 0.143 173.000 0.000 NA   NA
 839789 839790 CPS_1982 CPS_1983     FALSE 0.128 217.000 0.000 NA   NA
 839790 839791 CPS_1983 CPS_1984     TRUE 0.999 0.000 0.909 1.000   NA
 839791 839792 CPS_1984 CPS_1985     TRUE 0.999 -13.000 0.909 0.005 Y NA
 839793 839794 CPS_1986 CPS_1987   fnr TRUE 0.966 146.000 0.619 1.000 Y NA
 839794 839795 CPS_1987 CPS_1988 fnr   TRUE 0.821 54.000 0.141 1.000   NA
 839795 839796 CPS_1988 CPS_1989     TRUE 0.991 -3.000 0.266 NA   NA
 839796 839797 CPS_1989 CPS_1990     TRUE 0.980 103.000 0.713 NA Y NA
 839797 839798 CPS_1990 CPS_1991     TRUE 0.735 101.000 0.197 NA   NA
 839798 839799 CPS_1991 CPS_1992   ccoP TRUE 0.839 209.000 0.404 NA   NA
 839799 839800 CPS_1992 CPS_1993 ccoP ccoQ TRUE 0.997 -7.000 0.636 0.002   NA
 839800 839801 CPS_1993 CPS_1994 ccoQ ccoO TRUE 0.997 11.000 0.667 0.002   NA
 839801 839802 CPS_1994 CPS_1995 ccoO ccoN TRUE 0.998 11.000 0.700 0.002 N NA
 839802 839803 CPS_1995 CPS_1996 ccoN   FALSE 0.038 432.000 0.000 1.000 N NA
 839805 839806 CPS_1998 CPS_1999     TRUE 0.629 250.000 0.233 1.000   NA
 839807 839808 CPS_2000 CPS_2001     FALSE 0.290 75.000 0.000 NA   NA
 839809 839810 CPS_2002 CPS_2003     FALSE 0.170 107.000 0.000 NA   NA
 839812 839813 CPS_2005 CPS_2006     TRUE 0.910 4.000 0.014 1.000 N NA
 839814 839815 CPS_2007 CPS_2008     FALSE 0.195 99.000 0.000 NA   NA
 839817 839818 CPS_2010 CPS_2011     FALSE 0.302 72.000 0.000 NA   NA
 839818 839819 CPS_2011 CPS_2012   dctB FALSE 0.147 133.000 0.000 NA   NA
 839819 839820 CPS_2012 CPS_2013 dctB dctD TRUE 0.915 176.000 0.344 0.089 Y NA
 839822 839823 CPS_2015 CPS_2016     TRUE 0.671 19.000 0.000 NA   NA
 839823 839824 CPS_2016 CPS_2017     FALSE 0.290 75.000 0.000 NA   NA
 839824 839825 CPS_2017 CPS_2018     FALSE 0.026 438.000 0.000 NA   NA
 839825 839826 CPS_2018 CPS_2019     TRUE 0.424 46.000 0.000 NA   NA
 839828 839829 CPS_2021 CPS_2022     FALSE 0.367 56.000 0.000 NA   NA
 839829 839830 CPS_2022 CPS_2023   gabD1 FALSE 0.009 936.000 0.000 NA   NA
 839830 839831 CPS_2023 CPS_2024 gabD1   FALSE 0.353 59.000 0.000 NA   NA
 839831 839832 CPS_2024 CPS_2025     FALSE 0.137 189.000 0.000 NA   NA
 839832 839833 CPS_2025 CPS_2026     FALSE 0.172 106.000 0.000 NA   NA
 839833 839834 CPS_2026 CPS_2027     TRUE 0.735 -33.000 0.000 NA   NA
 839835 839836 CPS_2028 CPS_2029     FALSE 0.175 105.000 0.000 NA   NA
 839836 839837 CPS_2029 CPS_2030     TRUE 0.739 14.000 0.000 1.000   NA
 839838 839839 CPS_2031 CPS_2032     TRUE 0.736 21.000 0.000 NA N NA
 839839 839840 CPS_2032 CPS_2033     TRUE 0.963 -7.000 0.000 0.028 Y NA
 839840 839841 CPS_2033 CPS_2034     TRUE 0.420 47.000 0.000 NA   NA
 839842 839843 CPS_2035 CPS_2036   potD FALSE 0.130 201.000 0.000 1.000   NA
 839843 839844 CPS_2036 CPS_2037 potD potC TRUE 0.993 63.000 0.800 0.045 Y NA
 839844 839845 CPS_2037 CPS_2038 potC potB TRUE 0.999 -3.000 0.800 0.045 Y NA
 839845 839846 CPS_2038 CPS_2039 potB potA TRUE 0.998 -3.000 0.364 1.000 Y NA
 839846 839847 CPS_2039 CPS_2040 potA   FALSE 0.053 747.000 0.000 1.000 Y NA
 839847 839848 CPS_2040 CPS_2041     FALSE 0.143 159.000 0.000 NA   NA
 839850 839851 CPS_2043 CPS_2044   argE2 TRUE 0.471 37.000 0.000 1.000   NA
 839851 839852 CPS_2044 CPS_2045 argE2   TRUE 0.947 0.000 0.047 NA   NA
 839852 839853 CPS_2045 CPS_2046     TRUE 0.966 44.000 0.419 NA   NA
 839853 839854 CPS_2046 CPS_2047     TRUE 0.973 0.000 0.083 NA N NA
 839856 839857 CPS_2049 CPS_2050     FALSE 0.135 201.000 0.000 NA   NA
 839857 839858 CPS_2050 CPS_2051     FALSE 0.129 263.000 0.000 1.000 N NA
 839858 839859 CPS_2051 CPS_2052   aspA FALSE 0.030 471.000 0.000 1.000 N NA
 839859 839860 CPS_2052 CPS_2053 aspA   FALSE 0.071 343.000 0.000 1.000 N NA
 839860 839861 CPS_2053 CPS_2054     FALSE 0.261 99.000 0.000 1.000 N NA
 839862 839863 CPS_2055 CPS_2056   fdhG1 FALSE 0.207 123.000 0.000 1.000 N NA
 839863 839864 CPS_2056 CPS_2057 fdhG1 fdhB1 TRUE 1.000 2.000 0.870 0.003 Y NA
 839864 839865 CPS_2057 CPS_2058 fdhB1 fdhA1 TRUE 0.996 3.000 0.466 0.003   NA
 839865 839866 CPS_2058 CPS_2059 fdhA1 fdhD1 TRUE 0.738 14.000 0.010 0.003   NA
 839866 839867 CPS_2059 CPS_2060 fdhD1   TRUE 0.579 34.000 0.021 0.003   NA
 839867 839868 CPS_2060 CPS_2061   hisD1 FALSE 0.138 161.000 0.000 1.000   NA
 839869 839870 CPS_2062 CPS_2063   hupB2 FALSE 0.103 227.000 0.000 0.047   NA
 839870 839871 CPS_2063 CPS_2064 hupB2   FALSE 0.260 81.000 0.000 NA   NA
 839872 839873 CPS_2065 CPS_2066     FALSE 0.144 152.000 0.000 NA   NA
 839873 839874 CPS_2066 CPS_2067     FALSE 0.143 163.000 0.000 NA   NA
 839875 839876 CPS_2068 CPS_2069     FALSE 0.023 453.000 0.000 NA   NA
 839878 839879 CPS_2071 CPS_2072     FALSE 0.065 306.000 0.000 NA   NA
 839881 839882 CPS_2074 CPS_2075     FALSE 0.105 220.000 0.000 0.007   NA
 839883 839884 CPS_2076 CPS_2077     FALSE 0.101 250.000 0.000 NA   NA
 839884 839885 CPS_2077 CPS_2078     FALSE 0.155 119.000 0.000 NA   NA
 839886 839887 CPS_2079 CPS_2080     FALSE 0.377 74.000 0.000 1.000 N NA
 839887 839888 CPS_2080 CPS_2081     FALSE 0.331 281.000 0.000 1.000 Y NA
 839888 839889 CPS_2081 CPS_2082     TRUE 0.523 45.000 0.000 1.000 N NA
 839890 839891 CPS_2083 CPS_2084     FALSE 0.256 100.000 0.000 1.000 N NA
 839892 839893 CPS_2085 CPS_2086     FALSE 0.186 197.000 0.000 1.000 N NA
 839894 839895 CPS_2087 CPS_2088     TRUE 0.650 21.000 0.000 NA   NA
 839895 839896 CPS_2088 CPS_2089     FALSE 0.010 758.000 0.000 NA   NA
 839896 839897 CPS_2089 CPS_2090     FALSE 0.013 592.000 0.000 NA   NA
 839897 839898 CPS_2090 CPS_2091     TRUE 0.478 279.000 0.057 0.003 Y NA
 839898 839899 CPS_2091 CPS_2092     FALSE 0.128 206.000 0.000 1.000   NA
 839899 839900 CPS_2092 CPS_2093     TRUE 0.993 24.000 0.678 1.000   NA
 839900 839901 CPS_2093 CPS_2094     TRUE 0.997 -3.000 0.296 1.000 Y NA
 839901 839902 CPS_2094 CPS_2095     TRUE 0.997 -7.000 0.355 NA Y NA
 839902 839903 CPS_2095 CPS_2096     TRUE 0.924 2.000 0.016 NA N NA
 839903 839904 CPS_2096 CPS_2097     TRUE 0.875 -10.000 0.012 1.000 N NA
 839904 839905 CPS_2097 CPS_2098     FALSE 0.325 65.000 0.000 NA   NA
 839905 839906 CPS_2098 CPS_2099     FALSE 0.135 198.000 0.000 NA   NA
 839906 839907 CPS_2099 CPS_2100     TRUE 0.578 24.000 0.000 0.002   NA
 839907 839908 CPS_2100 CPS_2101     TRUE 0.800 -10.000 0.000 NA   NA
 839908 839909 CPS_2101 CPS_2102     FALSE 0.344 61.000 0.000 NA   NA
 839909 839910 CPS_2102 CPS_2103     TRUE 0.852 -16.000 0.025 NA   NA
 839910 839911 CPS_2103 CPS_2104     TRUE 0.986 -3.000 0.200 NA   NA
 839911 839912 CPS_2104 CPS_2105     TRUE 0.453 41.000 0.000 NA   NA
 839912 839913 CPS_2105 CPS_2106     FALSE 0.373 55.000 0.000 NA   NA
 839913 839914 CPS_2106 CPS_2107   galU2 TRUE 0.518 33.000 0.000 NA   NA
 839914 839915 CPS_2107 CPS_2108 galU2 pgi2 FALSE 0.069 348.000 0.000 1.000 N NA
 839916 839917 CPS_2109 CPS_2110     TRUE 0.424 46.000 0.000 NA   NA
 839917 839918 CPS_2110 CPS_2111     FALSE 0.207 129.000 0.000 NA N NA
 839918 839919 CPS_2111 CPS_2112     TRUE 0.669 281.000 0.315 NA   NA
 839920 839921 CPS_2113 CPS_2114   aspS FALSE 0.224 150.000 0.011 1.000 N NA
 839921 839922 CPS_2114 CPS_2115 aspS ruvC FALSE 0.220 166.000 0.015 0.013 N NA
 839922 839923 CPS_2115 CPS_2116 ruvC ruvA TRUE 0.919 241.000 0.451 0.009 Y NA
 839923 839924 CPS_2116 CPS_2117 ruvA ruvB TRUE 0.992 37.000 0.549 0.002 Y NA
 839924 839925 CPS_2117 CPS_2118 ruvB   FALSE 0.094 303.000 0.000 1.000 N NA
 839925 839926 CPS_2118 CPS_2119     FALSE 0.080 330.000 0.000 1.000 N NA
 839926 839927 CPS_2119 CPS_2120     TRUE 0.956 12.000 0.000 NA Y NA
 839927 839928 CPS_2120 CPS_2121     FALSE 0.219 117.000 0.000 NA N NA
 839928 839929 CPS_2121 CPS_2122     TRUE 0.991 57.000 1.000 0.087   NA
 839931 839932 CPS_2124 CPS_2125   msbA FALSE 0.042 615.000 0.075 0.055   NA
 839932 839933 CPS_2125 CPS_2126 msbA lpxK TRUE 0.980 13.000 0.205 1.000 N NA
 839933 839934 CPS_2126 CPS_2127 lpxK   TRUE 0.844 88.000 0.263 NA   NA
 839934 839935 CPS_2127 CPS_2128   kdsB TRUE 0.991 3.000 0.265 NA   NA
 839936 839937 CPS_2129 CPS_2130     FALSE 0.147 142.000 0.000 NA   NA
 839938 839939 CPS_2131 CPS_2132     TRUE 0.995 66.000 0.948 0.004 Y NA
 839939 839940 CPS_2132 CPS_2133     FALSE 0.373 55.000 0.000 NA   NA
 839940 839941 CPS_2133 CPS_2134     FALSE 0.009 773.000 0.000 NA   NA
 839944 839945 CPS_2137 CPS_2138     FALSE 0.310 69.000 0.000 NA   NA
 839945 839946 CPS_2138 CPS_2139   mfd FALSE 0.149 358.000 0.071 NA   NA
 839947 839948 CPS_2140 CPS_2141     FALSE 0.040 366.000 0.000 1.000   NA
 839948 839949 CPS_2141 CPS_2142   cysD FALSE 0.157 236.000 0.000 1.000 N NA
 839949 839950 CPS_2142 CPS_2143 cysD cysN TRUE 0.633 56.000 0.043 0.001 N NA
 839950 839951 CPS_2143 CPS_2144 cysN   FALSE 0.338 278.000 0.000 1.000 Y NA
 839951 839952 CPS_2144 CPS_2145   cysC TRUE 0.927 98.000 0.291 1.000 Y NA
 839952 839953 CPS_2145 CPS_2146 cysC   FALSE 0.187 321.000 0.070 NA   NA
 839953 839954 CPS_2146 CPS_2147   galE FALSE 0.143 164.000 0.000 NA   NA
 839956 839957 CPS_2149 CPS_2150   ggt1 TRUE 0.867 0.000 0.000 NA   NA
 839957 839958 CPS_2150 CPS_2151 ggt1   FALSE 0.031 403.000 0.000 1.000   NA
 839958 839959 CPS_2151 CPS_2152     FALSE 0.133 185.000 0.000 1.000   NA
 839959 839960 CPS_2152 CPS_2153     FALSE 0.013 586.000 0.000 NA   NA
 839960 839961 CPS_2153 CPS_2154     TRUE 0.995 3.000 0.377 NA   NA
 839961 839962 CPS_2154 CPS_2155     TRUE 0.950 35.000 0.286 0.028   NA
 839962 839963 CPS_2155 CPS_2156     TRUE 0.985 25.000 0.418 1.000 N NA
 839963 839964 CPS_2156 CPS_2157     FALSE 0.384 52.000 0.000 1.000   NA
 839967 839968 CPS_2160 CPS_2161     FALSE 0.142 174.000 0.000 NA   NA
 839970 839971 CPS_2163 CPS_2164     FALSE 0.132 209.000 0.000 NA   NA
 839971 839972 CPS_2164 CPS_2165     FALSE 0.021 469.000 0.000 NA   NA
 839972 839973 CPS_2165 CPS_2166     FALSE 0.146 147.000 0.000 NA   NA
 839973 839974 CPS_2166 CPS_2167     FALSE 0.143 170.000 0.000 NA   NA
 839974 839975 CPS_2167 CPS_2168     FALSE 0.209 95.000 0.000 NA   NA
 839975 839976 CPS_2168 CPS_2169     FALSE 0.159 115.000 0.000 NA   NA
 839976 839977 CPS_2169 CPS_2170     FALSE 0.146 146.000 0.000 NA   NA
 839977 839978 CPS_2170 CPS_2171     FALSE 0.158 116.000 0.000 NA   NA
 839980 839981 CPS_2173 CPS_2174 blc   FALSE 0.199 98.000 0.000 NA   NA
 839981 839982 CPS_2174 CPS_2175     FALSE 0.097 255.000 0.000 NA   NA
 839982 839983 CPS_2175 CPS_2176     TRUE 0.424 46.000 0.000 NA   NA
 839983 839984 CPS_2176 CPS_2177     FALSE 0.134 204.000 0.000 NA   NA
 839984 839985 CPS_2177 CPS_2178     FALSE 0.181 103.000 0.000 NA   NA
 839985 839986 CPS_2178 CPS_2179     FALSE 0.162 111.000 0.000 NA   NA
 839990 839991 CPS_2183 CPS_2184     FALSE 0.290 75.000 0.000 NA   NA
 839991 839992 CPS_2184 CPS_2185     FALSE 0.130 214.000 0.000 NA   NA
 839992 839993 CPS_2185 CPS_2186     TRUE 0.482 37.000 0.000 NA   NA
 839995 839996 CPS_2188 CPS_2189     TRUE 0.739 14.000 0.000 1.000   NA
 840000 840001 CPS_2193 CPS_2194 nth   TRUE 0.541 139.000 0.109 1.000 N NA
 840001 840002 CPS_2194 CPS_2195     TRUE 0.999 -10.000 0.908 0.050 Y NA
 840002 840003 CPS_2195 CPS_2196     TRUE 1.000 0.000 0.924 0.050 Y NA
 840003 840004 CPS_2196 CPS_2197     TRUE 0.992 72.000 0.814 0.050 Y NA
 840004 840005 CPS_2197 CPS_2198     TRUE 0.998 7.000 0.537 0.020 Y NA
 840005 840006 CPS_2198 CPS_2199     TRUE 0.999 2.000 0.564 0.050 Y NA
 840006 840007 CPS_2199 CPS_2200     TRUE 0.502 202.000 0.102 1.000 N NA
 840008 840009 CPS_2201 CPS_2202   nusA TRUE 0.987 49.000 0.759 NA   NA
 840009 840010 CPS_2202 CPS_2203 nusA infB TRUE 0.982 22.000 0.342 1.000 N NA
 840010 840011 CPS_2203 CPS_2204 infB rbfA TRUE 0.952 203.000 0.530 1.000 Y NA
 840011 840012 CPS_2204 CPS_2205 rbfA truB TRUE 0.997 4.000 0.318 1.000 Y NA
 840012 840013 CPS_2205 CPS_2206 truB rpsO TRUE 0.806 244.000 0.211 1.000 Y NA
 840013 840014 CPS_2206 CPS_2207 rpsO pnp TRUE 0.713 382.000 0.335 1.000 Y NA
 840014 840015 CPS_2207 CPS_2208 pnp   FALSE 0.379 181.000 0.071 1.000   NA
 840015 840016 CPS_2208 CPS_2209     FALSE 0.411 93.000 0.047 0.015   NA
 840019 840020 CPS_2212 CPS_2213     FALSE 0.150 127.000 0.000 NA   NA
 840020 840021 CPS_2213 CPS_2214   gltA TRUE 0.544 31.000 0.000 NA   NA
 840022 840023 CPS_2215 CPS_2216 sdhC sdhD TRUE 0.998 -6.000 0.453 0.001 Y NA
 840023 840024 CPS_2216 CPS_2217 sdhD sdhA TRUE 0.999 1.000 0.705 0.001 Y NA
 840024 840025 CPS_2217 CPS_2218 sdhA sdhB TRUE 0.998 12.000 0.604 0.001 Y NA
 840025 840026 CPS_2218 CPS_2219 sdhB sucA TRUE 0.421 321.000 0.067 1.000 Y NA
 840026 840027 CPS_2219 CPS_2220 sucA sucB TRUE 0.991 59.000 0.667 1.000 Y NA
 840027 840028 CPS_2220 CPS_2221 sucB sucC TRUE 0.768 189.000 0.136 1.000 Y NA
 840028 840029 CPS_2221 CPS_2222 sucC sucD TRUE 0.999 0.000 0.806 0.001 Y NA
 840030 840031 CPS_2223 CPS_2224     FALSE 0.008 1322.000 0.000 NA   NA
 840031 840032 CPS_2224 CPS_2225     TRUE 0.607 26.000 0.000 NA   NA
 840033 840034 CPS_2226 CPS_2227     FALSE 0.325 65.000 0.000 NA   NA
 840034 840035 CPS_2227 CPS_2228     FALSE 0.147 134.000 0.000 NA   NA
 840035 840036 CPS_2228 CPS_2229     TRUE 0.845 5.000 0.000 NA   NA
 840039 840040 CPS_2232 CPS_2233     FALSE 0.143 165.000 0.000 NA   NA
 840041 840042 CPS_2234 CPS_2235     TRUE 0.716 -67.000 0.000 NA   NA
 840044 840045 CPS_2237 CPS_2238     FALSE 0.036 384.000 0.000 NA   NA
 840045 840046 CPS_2238 CPS_2239     FALSE 0.125 221.000 0.000 NA   NA
 840046 840047 CPS_2239 CPS_2240     FALSE 0.147 139.000 0.000 NA   NA
 840049 840050 CPS_2242 CPS_2243     FALSE 0.140 164.000 0.006 1.000   NA
 840050 840051 CPS_2243 CPS_2244     FALSE 0.154 181.000 0.009 NA   NA
 840051 840052 CPS_2244 CPS_2245     FALSE 0.142 175.000 0.000 NA   NA
 840052 840053 CPS_2245 CPS_2246     TRUE 0.726 -52.000 0.000 NA   NA
 840056 840057 CPS_2249 CPS_2250     FALSE 0.286 76.000 0.000 NA   NA
 840057 840058 CPS_2250 CPS_2251   cysK FALSE 0.256 152.000 0.032 NA   NA
 840058 840059 CPS_2251 CPS_2252 cysK   FALSE 0.203 151.000 0.000 NA N NA
 840060 840061 CPS_2253 CPS_2254     TRUE 0.829 -7.000 0.000 NA   NA
 840061 840062 CPS_2254 CPS_2255   dnaQ FALSE 0.329 64.000 0.000 NA   NA
 840062 840063 CPS_2255 CPS_2256 dnaQ   TRUE 0.958 -9.000 0.098 NA   NA
 840063 840064 CPS_2256 CPS_2257     TRUE 0.769 13.000 0.000 NA   NA
 840064 840065 CPS_2257 CPS_2258     FALSE 0.195 99.000 0.000 NA   NA
 840065 840066 CPS_2258 CPS_2259     FALSE 0.315 68.000 0.000 NA   NA
 840066 840067 CPS_2259 CPS_2260     FALSE 0.315 68.000 0.000 NA   NA
 840067 840068 CPS_2260 CPS_2261     FALSE 0.315 68.000 0.000 NA   NA
 840068 840069 CPS_2261 CPS_2262     FALSE 0.155 119.000 0.000 NA   NA
 840069 840070 CPS_2262 CPS_2263     FALSE 0.017 522.000 0.000 NA   NA
 840071 840072 CPS_2264 CPS_2265   fadE FALSE 0.138 166.000 0.000 1.000   NA
 840074 840075 CPS_2267 CPS_2268     FALSE 0.256 82.000 0.000 NA   NA
 840075 840076 CPS_2268 CPS_2269     TRUE 0.430 45.000 0.000 NA   NA
 840076 840077 CPS_2269 CPS_2270     FALSE 0.147 134.000 0.000 NA   NA
 840080 840081 CPS_2273 CPS_2274 polB metC FALSE 0.185 200.000 0.000 1.000 N NA
 840083 840084 CPS_2276 CPS_2277     FALSE 0.132 259.000 0.000 1.000 N NA
 840084 840085 CPS_2277 CPS_2278     TRUE 0.955 66.000 0.273 0.028 Y NA
 840086 840087 CPS_2279 CPS_2280 pyk   TRUE 0.541 96.000 0.071 1.000 N NA
 840088 840089 CPS_2281 CPS_2282 zwf pgl TRUE 0.993 3.000 0.163 1.000 Y NA
 840089 840090 CPS_2282 CPS_2283 pgl edd TRUE 0.941 64.000 0.202 1.000 Y NA
 840090 840091 CPS_2283 CPS_2284 edd eda TRUE 0.958 123.000 0.523 1.000 Y NA
 840092 840093 CPS_2285 CPS_2286     TRUE 0.985 84.000 1.000 NA   NA
 840094 840095 CPS_2287 CPS_2288     FALSE 0.209 95.000 0.000 NA   NA
 840097 840098 CPS_2290 CPS_2291 rluC   TRUE 0.992 12.000 0.389 1.000   NA
 840100 840101 CPS_2293 CPS_2294   rpmF TRUE 0.979 49.000 0.599 NA   NA
 840101 840102 CPS_2294 CPS_2295 rpmF plsX TRUE 0.971 41.000 0.418 1.000 N NA
 840102 840103 CPS_2295 CPS_2296 plsX fabD TRUE 0.524 305.000 0.106 0.003 Y NA
 840103 840104 CPS_2296 CPS_2297 fabD fabG TRUE 0.945 112.000 0.432 0.003 Y NA
 840104 840105 CPS_2297 CPS_2298 fabG acpP TRUE 0.905 161.000 0.321 0.003 Y NA
 840105 840106 CPS_2298 CPS_2299 acpP fabF TRUE 0.656 424.000 0.346 1.000 Y NA
 840106 840107 CPS_2299 CPS_2300 fabF pabC TRUE 0.689 141.000 0.187 1.000 N NA
 840107 840108 CPS_2300 CPS_2301 pabC   TRUE 0.903 46.000 0.204 NA   NA
 840108 840109 CPS_2301 CPS_2302   tmk TRUE 0.837 77.000 0.209 NA   NA
 840109 840110 CPS_2302 CPS_2303 tmk holB TRUE 0.986 10.000 0.211 1.000 N NA
 840110 840111 CPS_2303 CPS_2304 holB   TRUE 0.989 16.000 0.382 NA N NA