Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim 100568 100569 SPy0002 SPy0003 dnaA dnaN TRUE 0.639 155.000 0.328 1.000 Y 0.370 100569 100570 SPy0003 SPy0004 dnaN TRUE 0.447 75.000 0.009 NA 0.663 100570 100571 SPy0004 SPy0006 FALSE 0.072 330.000 0.064 NA 0.194 100571 100572 SPy0006 SPy0007 pth TRUE 0.793 70.000 0.184 1.000 Y -0.210 100572 100573 SPy0007 SPy0008 pth trcF TRUE 0.918 3.000 0.137 1.000 N 0.159 100573 100574 SPy0008 SPy0009 trcF FALSE 0.151 139.000 0.024 1.000 N 0.058 100574 100575 SPy0009 SPy0010 divIC TRUE 0.911 -13.000 0.053 1.000 N -0.897 100575 100576 SPy0010 SPy0012 divIC FALSE 0.130 135.000 0.011 1.000 N -0.980 100576 100577 SPy0012 SPy0013 TRUE 0.898 -3.000 0.014 1.000 N -0.050 100577 100578 SPy0013 SPy0015 ftsH FALSE 0.020 569.000 0.051 1.000 N -0.115 100578 100579 SPy0015 SPy0016 ftsH FALSE 0.026 325.000 0.009 1.000 N -0.599 100579 3811771 SPy0016 SPy_r01 FALSE 0.023 566.000 0.000 NA NA 3811771 398197 SPy_r01 SPy_t01 tRNA-Ala TRUE 0.555 50.000 0.000 NA NA 398197 407264 SPy_t01 SPy_r02 tRNA-Ala rrl FALSE 0.045 296.000 0.000 NA NA 407264 3811772 SPy_r02 SPy_r13 rrl FALSE 0.296 87.000 0.000 NA NA 3811772 398198 SPy_r13 SPy_t02 tRNA-Val TRUE 0.847 18.000 0.000 NA NA 398198 398199 SPy_t02 SPy_t03 tRNA-Val tRNA-Asp TRUE 0.847 18.000 0.000 NA NA 398199 398200 SPy_t03 SPy_t04 tRNA-Asp tRNA-Lys TRUE 0.727 32.000 0.000 NA NA 398200 398201 SPy_t04 SPy_t05 tRNA-Lys tRNA-Leu TRUE 0.868 6.000 0.000 NA NA 398201 398202 SPy_t05 SPy_t06 tRNA-Leu tRNA-Thr TRUE 0.851 11.000 0.000 NA NA 398202 398203 SPy_t06 SPy_t07 tRNA-Thr tRNA-Gly TRUE 0.860 13.000 0.000 NA NA 398203 398204 SPy_t07 SPy_t08 tRNA-Gly tRNA-Leu TRUE 0.861 9.000 0.000 NA NA 398204 398205 SPy_t08 SPy_t09 tRNA-Leu tRNA-Arg TRUE 0.853 17.000 0.000 NA NA 398205 398206 SPy_t09 SPy_t10 tRNA-Arg tRNA-Pro TRUE 0.879 4.000 0.000 NA NA 398206 3811773 SPy_t10 SPy_r03 tRNA-Pro FALSE 0.202 127.000 0.000 NA NA 3811773 398207 SPy_r03 SPy_t11 tRNA-Ala TRUE 0.555 50.000 0.000 NA NA 398207 407265 SPy_t11 SPy_r04 tRNA-Ala rrl FALSE 0.045 296.000 0.000 NA NA 407265 3811774 SPy_r04 SPy_r14 rrl FALSE 0.296 87.000 0.000 NA NA 3811774 398208 SPy_r14 SPy_t12 tRNA-Val TRUE 0.847 18.000 0.000 NA NA 398208 398209 SPy_t12 SPy_t13 tRNA-Val tRNA-Gly TRUE 0.868 6.000 0.000 NA NA 398209 398210 SPy_t13 SPy_t14 tRNA-Gly tRNA-Ile TRUE 0.689 35.000 0.000 NA NA 398210 398211 SPy_t14 SPy_t15 tRNA-Ile tRNA-Glu TRUE 0.808 23.000 0.000 NA NA 398211 2137374 SPy_t15 SPy_t16 tRNA-Glu TRUE 0.853 10.000 0.000 NA NA 2137374 398213 SPy_t16 SPy_t17 tRNA-Met TRUE 0.851 11.000 0.000 NA NA 398213 398214 SPy_t17 SPy_t18 tRNA-Met tRNA-Phe TRUE 0.822 21.000 0.000 NA NA 398214 398215 SPy_t18 SPy_t19 tRNA-Phe tRNA-Gly TRUE 0.860 13.000 0.000 NA NA 398215 398216 SPy_t19 SPy_t20 tRNA-Gly tRNA-Ile TRUE 0.689 35.000 0.000 NA NA 398216 398217 SPy_t20 SPy_t21 tRNA-Ile tRNA-Ser TRUE 0.853 10.000 0.000 NA NA 398217 100580 SPy_t21 SPy0019 tRNA-Ser FALSE 0.018 1474.000 0.000 NA NA 100580 100581 SPy0019 SPy0020 prsA.2 FALSE 0.128 253.000 0.107 NA -0.304 100581 100582 SPy0020 SPy0021 prsA.2 FALSE 0.042 186.000 0.000 1.000 N 0.428 100582 100583 SPy0021 SPy0022 plsX FALSE 0.187 103.000 0.011 1.000 N 0.584 100583 100584 SPy0022 SPy0023 plsX acpP.2 TRUE 0.993 -7.000 0.017 0.010 Y -0.473 100584 100585 SPy0023 SPy0024 acpP.2 purC FALSE 0.181 121.000 0.017 1.000 N 0.934 100585 100586 SPy0024 SPy0025 purC TRUE 0.650 76.000 0.043 1.000 Y 0.906 100586 100587 SPy0025 SPy0026 purF TRUE 0.342 161.000 0.024 1.000 Y -0.699 100587 100588 SPy0026 SPy0027 purF purM TRUE 0.961 28.000 0.248 1.000 Y -0.788 100588 100589 SPy0027 SPy0028 purM purN TRUE 0.820 168.000 0.238 0.003 Y -0.806 100591 100592 SPy0032 SPy0033 purD purE FALSE 0.153 278.000 0.044 1.000 Y NA 100592 100593 SPy0033 SPy0034 purE purK TRUE 0.992 -49.000 0.002 0.002 Y NA 100593 100594 SPy0034 SPy0035 purK abiR TRUE 0.774 27.000 0.000 NA 0.884 100594 100595 SPy0035 SPy0036 abiR purB TRUE 0.845 18.000 0.000 NA 0.413 100595 100596 SPy0036 SPy0037 purB FALSE 0.181 132.000 0.005 1.000 0.121 100596 100597 SPy0037 SPy0038 ruvB FALSE 0.065 226.000 0.002 1.000 0.195 100597 100598 SPy0038 SPy0039 ruvB FALSE 0.116 138.000 0.005 1.000 N -0.302 100598 100599 SPy0039 SPy0040 TRUE 0.873 23.000 0.019 NA 0.881 100599 100600 SPy0040 SPy0041 TRUE 0.987 -3.000 0.351 NA -0.965 100600 100601 SPy0041 SPy0044 adhA FALSE 0.012 3203.000 0.000 1.000 0.057 100601 100602 SPy0044 SPy0045 adhA FALSE 0.021 388.000 0.000 1.000 0.687 100602 100603 SPy0045 SPy0047 rpsJ FALSE 0.034 201.000 0.000 1.000 N -0.522 100603 100604 SPy0047 SPy0049 rpsJ rplC TRUE 0.701 248.000 0.467 0.045 Y -0.686 100604 100605 SPy0049 SPy0050 rplC rplD TRUE 0.995 24.000 0.544 0.033 Y 0.213 100605 100606 SPy0050 SPy0051 rplD rplW TRUE 0.996 0.000 0.307 0.033 Y 0.449 100606 100607 SPy0051 SPy0052 rplW rplB TRUE 0.998 18.000 0.849 0.040 Y -0.344 100607 100608 SPy0052 SPy0053 rplB rpsS TRUE 0.946 139.000 0.820 0.045 Y -0.374 100608 100609 SPy0053 SPy0055 rpsS rplV TRUE 0.998 16.000 0.769 0.045 Y -0.183 100609 100610 SPy0055 SPy0056 rplV rpsC TRUE 0.997 13.000 0.719 0.045 Y 0.092 100610 100611 SPy0056 SPy0057 rpsC rplP TRUE 0.998 4.000 0.828 0.045 Y -0.599 100611 100612 SPy0057 SPy0059 rplP rpmC TRUE 0.998 10.000 0.802 0.033 Y -0.857 100612 100613 SPy0059 SPy0060 rpmC rpsQ TRUE 0.997 26.000 0.828 0.033 Y 0.944 100613 100614 SPy0060 SPy0061 rpsQ TRUE 0.997 25.000 0.791 0.045 Y NA 100614 100615 SPy0061 SPy0062 rplX TRUE 0.976 79.000 0.810 0.045 Y NA 100615 100616 SPy0062 SPy0063 rplX rplE TRUE 0.997 24.000 0.758 0.033 Y 0.973 100616 100617 SPy0063 SPy0064 rplE rpsN TRUE 0.996 16.000 0.496 0.033 Y 0.668 100617 100618 SPy0064 SPy0065 rpsN rpsH TRUE 0.886 151.000 0.473 0.033 Y 0.322 100618 100619 SPy0065 SPy0066 rpsH rplF TRUE 0.895 203.000 0.808 0.033 Y 0.612 100619 100620 SPy0066 SPy0067 rplF rplR TRUE 0.967 105.000 0.815 0.033 Y 0.648 100620 100621 SPy0067 SPy0069 rplR rpsE TRUE 0.998 19.000 0.814 0.045 Y -0.728 100621 100622 SPy0069 SPy0071 rpsE rpmD TRUE 0.998 15.000 0.789 0.045 Y -0.416 100622 100623 SPy0071 SPy0072 rpmD rplO TRUE 0.877 214.000 0.653 0.006 Y 0.031 100623 100624 SPy0072 SPy0073 rplO secY TRUE 0.985 17.000 0.730 1.000 N 0.597 100624 100625 SPy0073 SPy0074 secY adk TRUE 0.346 150.000 0.241 1.000 N 0.678 100625 100626 SPy0074 SPy0075 adk infA FALSE 0.220 118.000 0.059 1.000 N 0.626 100626 100627 SPy0075 SPy0076 infA rpmJ TRUE 0.930 26.000 0.067 1.000 Y -0.917 100627 100628 SPy0076 SPy0077 rpmJ rpsM TRUE 0.985 18.000 0.086 0.033 Y -0.667 100628 100629 SPy0077 SPy0078 rpsM rpsK TRUE 0.998 18.000 0.810 0.033 Y -0.223 100629 100630 SPy0078 SPy0080 rpsK rpoA TRUE 0.833 46.000 0.308 1.000 N -0.630 100630 100631 SPy0080 SPy0080a rpoA rplQ TRUE 0.990 15.000 0.873 1.000 N NA 100631 3811775 SPy0080a SPy_r05 rplQ FALSE 0.020 823.000 0.000 NA NA 3811775 398218 SPy_r05 SPy_t22 tRNA-Ala TRUE 0.555 50.000 0.000 NA NA 398218 2137376 SPy_t22 SPy_r06 tRNA-Ala FALSE 0.045 296.000 0.000 NA NA 2137376 3811776 SPy_r06 SPy_r15 FALSE 0.303 86.000 0.000 NA NA 3811776 398219 SPy_r15 SPy_t23 tRNA-Val TRUE 0.847 18.000 0.000 NA NA 398219 398220 SPy_t23 SPy_t24 tRNA-Val tRNA-Gly TRUE 0.868 6.000 0.000 NA NA 398220 398221 SPy_t24 SPy_t25 tRNA-Gly tRNA-Ile TRUE 0.689 35.000 0.000 NA NA 398221 398222 SPy_t25 SPy_t26 tRNA-Ile tRNA-Glu TRUE 0.808 23.000 0.000 NA NA 398222 398223 SPy_t26 SPy_t27 tRNA-Glu tRNA-Ser TRUE 0.851 11.000 0.000 NA NA 398223 398224 SPy_t27 SPy_t28 tRNA-Ser tRNA-Met TRUE 0.853 10.000 0.000 NA NA 398224 398225 SPy_t28 SPy_t29 tRNA-Met tRNA-Phe TRUE 0.822 21.000 0.000 NA NA 398225 398226 SPy_t29 SPy_t30 tRNA-Phe tRNA-Tyr TRUE 0.830 20.000 0.000 NA NA 398226 398227 SPy_t30 SPy_t31 tRNA-Tyr tRNA-Trp TRUE 0.865 7.000 0.000 NA NA 398227 398228 SPy_t31 SPy_t32 tRNA-Trp tRNA-His TRUE 0.855 12.000 0.000 NA NA 398228 2137377 SPy_t32 SPy_t33 tRNA-His TRUE 0.853 10.000 0.000 NA NA 2137377 398230 SPy_t33 SPy_t34 tRNA-Leu TRUE 0.830 20.000 0.000 NA NA 398230 100632 SPy_t34 SPy0084 tRNA-Leu FALSE 0.057 260.000 0.000 NA NA 100632 2137378 SPy0084 SPy_0088 FALSE 0.022 638.000 0.000 NA NA 2137378 100633 SPy_0088 SPy0092 adcR FALSE 0.232 113.000 0.000 NA NA 100633 100634 SPy0092 SPy0093 adcR adcC TRUE 0.939 4.000 0.192 1.000 N 0.549 100634 100635 SPy0093 SPy0094 adcC adcB TRUE 0.997 -7.000 0.673 1.000 Y -0.361 100636 100637 SPy0095 SPy0096 tyrS TRUE 0.414 51.000 0.004 1.000 N 0.433 100638 100639 SPy0097 SPy0098 pbp1b rpoB FALSE 0.020 264.000 0.000 1.000 N -0.393 100639 100640 SPy0098 SPy0099 rpoB rpoC TRUE 0.982 91.000 0.851 0.002 Y 0.070 100640 100641 SPy0099 SPy0100 rpoC FALSE 0.208 152.000 0.007 NA 0.914 100641 100642 SPy0100 SPy0101 comYA TRUE 0.438 93.000 0.083 NA -0.074 100642 100643 SPy0101 SPy0102 comYA comYB TRUE 0.855 122.000 0.639 1.000 Y -0.525 100643 100644 SPy0102 SPy0103 comYB comYC TRUE 0.999 2.000 0.861 0.002 Y -0.601 100644 100645 SPy0103 SPy0104 comYC TRUE 0.982 -25.000 0.110 NA Y NA 100645 100646 SPy0104 SPy0105 TRUE 0.992 5.000 0.786 NA NA 100646 100647 SPy0105 SPy0106 comYD TRUE 0.983 -7.000 0.250 NA NA 100647 100648 SPy0106 SPy0107 comYD TRUE 0.979 -16.000 0.232 NA NA 100648 100649 SPy0107 SPy0108 TRUE 0.423 98.000 0.087 NA 0.987 100649 100650 SPy0108 SPy0109 ackA TRUE 0.561 59.000 0.130 1.000 N 0.344 100650 100651 SPy0109 SPy0110 ackA FALSE 0.103 187.000 0.000 NA -0.044 100652 100653 SPy0112 SPy0115 proC pepA TRUE 0.547 48.000 0.041 1.000 N 0.188 100653 100654 SPy0115 SPy0116 pepA TRUE 0.412 110.000 0.100 NA 0.132 100656 100657 SPy0121 SPy0122 TRUE 0.744 20.000 0.005 1.000 N -0.226 100657 100658 SPy0122 SPy0123 TRUE 0.906 -13.000 0.034 1.000 N 0.154 100658 100659 SPy0123 SPy0124 rofA FALSE 0.208 147.000 0.003 NA 0.434 100660 100661 SPy0127 SPy0128 TRUE 0.825 33.000 0.061 NA -0.169 100661 100662 SPy0128 SPy0129 TRUE 0.848 10.000 0.000 NA -0.206 100662 100663 SPy0129 SPy0130 TRUE 0.985 22.000 0.667 NA 0.863 100664 100665 SPy0131 SPy0133 FALSE 0.195 211.000 0.000 NA Y -0.403 100669 100670 SPy0140 SPy0141 atoD.2 TRUE 0.961 12.000 0.100 1.000 Y -0.067 100670 100671 SPy0141 SPy0142 atoD.2 TRUE 0.992 3.000 0.200 0.054 Y NA 100673 100674 SPy0145 SPy0146 TRUE 0.690 37.000 0.016 NA N 0.343 100674 100675 SPy0146 SPy0147 FALSE 0.026 455.000 0.000 NA 0.929 100675 100676 SPy0147 SPy0148 ntpI TRUE 0.920 -10.000 0.000 NA 0.362 100676 100677 SPy0148 SPy0149 ntpI ntpK TRUE 0.998 2.000 0.848 0.010 0.081 100677 100678 SPy0149 SPy0150 ntpK ntpE TRUE 0.821 68.000 0.045 0.004 -0.346 100678 100679 SPy0150 SPy0151 ntpE ntpC TRUE 0.980 16.000 0.097 0.004 0.263 100679 100680 SPy0151 SPy0154 ntpC ntpA FALSE 0.173 518.000 0.000 0.010 Y 0.034 100680 100681 SPy0154 SPy0155 ntpA ntpB TRUE 0.999 1.000 0.776 0.010 Y -0.291 100681 100682 SPy0155 SPy0157 ntpB ntpD TRUE 0.978 45.000 0.238 0.004 Y -0.370 100683 100684 SPy0158 SPy0159 TRUE 0.992 13.000 0.818 NA -0.880 100685 100686 SPy0160 SPy0163 purA FALSE 0.117 342.000 0.000 0.022 -0.379 100686 100687 SPy0163 SPy0164 nusG FALSE 0.090 173.000 0.000 1.000 0.961 100687 100688 SPy0164 SPy0165 nusG nga FALSE 0.021 372.000 0.000 1.000 -0.200 100688 100689 SPy0165 SPy0166 nga TRUE 0.485 134.000 0.286 1.000 0.519 100689 100690 SPy0166 SPy0167 slo TRUE 0.884 24.000 0.125 1.000 0.261 100690 100691 SPy0167 SPy0168 slo FALSE 0.060 250.000 0.000 NA 0.034 100692 100693 SPy0169 SPy0170 FALSE 0.029 412.000 0.000 NA NA 100693 100694 SPy0170 SPy0171 FALSE 0.110 185.000 0.000 NA NA 100695 100696 SPy0172 SPy0173 metB leuS FALSE 0.047 175.000 0.000 1.000 N -0.742 100696 100697 SPy0173 SPy0174 leuS FALSE 0.027 313.000 0.000 1.000 0.065 100697 100698 SPy0174 SPy0175 TRUE 0.924 71.000 0.431 0.023 0.142 100698 100699 SPy0175 SPy0176 TRUE 0.880 122.000 0.279 0.017 Y 0.186 100699 100700 SPy0176 SPy0177 TRUE 0.794 91.000 0.328 1.000 Y 0.542 100700 100701 SPy0177 SPy0178 TRUE 0.992 5.000 0.536 1.000 Y NA 100701 100702 SPy0178 SPy0179 araD TRUE 0.995 2.000 0.700 1.000 Y NA 100702 100703 SPy0179 SPy0180 araD TRUE 0.485 58.000 0.000 NA 0.424 100703 100704 SPy0180 SPy0181 FALSE 0.199 124.000 0.000 NA -0.794 100704 100705 SPy0181 SPy0182 FALSE 0.212 253.000 0.231 NA -0.643 100705 100706 SPy0182 SPy0183 opuAA FALSE 0.025 488.000 0.000 NA 0.583 100706 100707 SPy0183 SPy0184 opuAA opuABC TRUE 0.988 16.000 0.177 0.089 Y -0.472 100707 100708 SPy0184 SPy0185 opuABC polA FALSE 0.122 131.000 0.003 1.000 N 0.821 100708 100709 SPy0185 SPy0186 polA FALSE 0.132 187.000 0.005 NA -0.962 100709 100710 SPy0186 SPy0187 spf TRUE 0.617 52.000 0.010 NA -0.689 100710 100711 SPy0187 SPy0188 spf vlg FALSE 0.147 156.000 0.000 NA 0.439 100711 100712 SPy0188 SPy0189 vlg FALSE 0.070 222.000 0.000 NA -0.881 100712 100713 SPy0189 SPy0190 TRUE 0.887 -7.000 0.000 1.000 -0.416 100713 100714 SPy0190 SPy0191 TRUE 0.924 -7.000 0.000 NA 0.597 2137380 100715 SPy_0191b SPy0195 TRUE 0.903 -293.000 0.000 NA NA 100715 100716 SPy0195 SPy0196 FALSE 0.244 78.000 0.000 NA N -0.257 100718 100719 SPy0198 SPy0199 TRUE 0.964 21.000 0.000 0.068 Y 0.779 100719 100720 SPy0199 SPy0201 FALSE 0.292 86.000 0.000 NA -0.650 100721 100722 SPy0203 SPy0205 tgt FALSE 0.075 217.000 0.004 1.000 NA 100722 100723 SPy0205 SPy0207 TRUE 0.927 4.000 0.039 NA NA 100723 100724 SPy0207 SPy0208 FALSE 0.270 140.000 0.033 NA 0.558 100726 100727 SPy0212 SPy0215 speG pgi FALSE 0.017 456.000 0.000 1.000 -0.615 2137381 100729 SPy_0217 SPy0219 TRUE 0.864 8.000 0.000 NA NA 100729 100730 SPy0219 SPy0223 FALSE 0.110 185.000 0.000 NA NA 100731 100732 SPy0224 SPy0226 hasC.2 gpsA TRUE 0.608 33.000 0.007 1.000 N -0.702 100733 100734 SPy0227 SPy0228 TRUE 0.861 9.000 0.000 NA NA 100734 100735 SPy0228 SPy0229 TRUE 0.963 -7.000 0.080 NA NA 100735 100736 SPy0229 SPy0230 TRUE 0.999 3.000 0.720 0.009 Y -0.798 100736 100737 SPy0230 SPy0233 FALSE 0.291 117.000 0.010 NA -0.610 100737 100738 SPy0233 SPy0235 FALSE 0.285 110.000 0.005 NA -0.703 100738 100739 SPy0235 SPy0236 sms FALSE 0.279 81.000 0.028 1.000 N -0.786 100739 100740 SPy0236 SPy0237 sms FALSE 0.072 189.000 0.009 1.000 N 0.451 100740 100741 SPy0237 SPy0238 TRUE 0.498 146.000 0.278 NA -0.374 100741 100742 SPy0238 SPy0239 gltX FALSE 0.151 182.000 0.008 NA -0.471 100742 100743 SPy0239 SPy0242 gltX FALSE 0.011 395.000 0.000 1.000 N 0.713 100743 100744 SPy0242 SPy0244 TRUE 0.998 -3.000 0.750 NA Y -0.228 100744 100745 SPy0244 SPy0245 TRUE 0.994 4.000 0.571 NA Y -0.485 100745 100746 SPy0245 SPy0246 rnpA FALSE 0.009 540.000 0.000 1.000 N 0.507 100746 100747 SPy0246 SPy0247 rnpA TRUE 0.899 -34.000 0.052 1.000 N 0.360 100747 100748 SPy0247 SPy0248 TRUE 0.911 12.000 0.106 1.000 -0.064 100748 100749 SPy0248 SPy0250 rpmH FALSE 0.036 315.000 0.002 1.000 0.308 100749 100750 SPy0250 SPy0251 rpmH FALSE 0.035 274.000 0.000 1.000 0.781 100750 100751 SPy0251 SPy0252 TRUE 0.956 49.000 0.500 1.000 Y 0.445 100751 100752 SPy0252 SPy0254 TRUE 0.976 28.000 0.133 0.042 Y -0.512 100752 100753 SPy0254 SPy0255 TRUE 0.999 13.000 1.000 0.042 Y 0.326 100753 100754 SPy0255 SPy0256 FALSE 0.143 157.000 0.000 NA -0.356 100754 100755 SPy0256 SPy0257 nanH TRUE 0.983 12.000 0.500 NA 0.430 100755 100756 SPy0257 SPy0258 nanH TRUE 0.846 22.000 0.108 1.000 N -0.270 100758 100759 SPy0260 SPy0261 TRUE 0.982 -7.000 0.058 NA Y 0.252 100759 100760 SPy0261 SPy0262 ksgA FALSE 0.257 114.000 0.093 1.000 N -0.274 100760 100761 SPy0262 SPy0263 ksgA FALSE 0.024 424.000 0.003 1.000 -0.233 100761 100762 SPy0263 SPy0264 rpe TRUE 0.947 10.000 0.213 1.000 -0.941 100762 100763 SPy0264 SPy0265 rpe TRUE 0.955 -7.000 0.166 1.000 N -0.891 100763 100764 SPy0265 SPy0266 TRUE 0.932 2.000 0.030 NA -0.956 100764 100765 SPy0266 SPy0267 cbf TRUE 0.951 -10.000 0.030 NA -0.801 100765 100766 SPy0267 SPy0268 cbf purR FALSE 0.071 267.000 0.052 1.000 -0.787 100766 100767 SPy0268 SPy0269 purR prgA TRUE 0.950 -9.000 0.017 NA -0.079 100767 100768 SPy0269 SPy0271 prgA rpsL FALSE 0.121 208.000 0.012 NA -0.182 100768 100769 SPy0271 SPy0272 rpsL rpsG TRUE 0.992 21.000 0.224 0.006 Y -0.918 100769 100770 SPy0272 SPy0273 rpsG fus TRUE 0.411 367.000 0.579 1.000 Y 0.052 100770 100771 SPy0273 SPy0274 fus plr FALSE 0.014 348.000 0.000 1.000 N 0.951 100772 100773 SPy0276 SPy0277 TRUE 0.997 -7.000 0.758 1.000 Y NA 100774 100775 SPy0278 SPy0280 bacA TRUE 0.632 66.000 0.118 NA 0.347 100775 100776 SPy0280 SPy0281 bacA mecA FALSE 0.278 146.000 0.132 NA N -0.098 100776 100777 SPy0281 SPy0282 mecA rgpG TRUE 0.959 7.000 0.267 NA N -0.668 100777 100778 SPy0282 SPy0285 rgpG FALSE 0.164 122.000 0.013 1.000 N -0.434 100778 100779 SPy0285 SPy0287 TRUE 0.624 95.000 0.139 1.000 Y -0.303 100779 100780 SPy0287 SPy0288 TRUE 0.959 31.000 0.606 1.000 N 0.191 100780 100781 SPy0288 SPy0289 TRUE 0.973 -13.000 0.292 1.000 N -0.026 100781 100782 SPy0289 SPy0290 TRUE 0.991 -7.000 0.152 0.002 N -0.580 3811777 100784 SPy_r07 SPy0294 oppB TRUE 0.903 -3542.000 0.000 NA NA 100784 100785 SPy0294 SPy0295 oppB oppC TRUE 0.998 0.000 0.556 0.042 Y -0.888 100785 100786 SPy0295 SPy0296 oppC oppD TRUE 0.993 9.000 0.650 1.000 Y -0.863 100786 100787 SPy0296 SPy0297 oppD oppF TRUE 0.996 -7.000 0.095 0.002 Y -0.853 2137382 2137383 SPy_0298 SPy_0299 TRUE 0.415 66.000 0.000 NA NA 398231 407267 SPy_t35 SPy_r08 tRNA-Ala rrl FALSE 0.045 296.000 0.000 NA NA 407267 3811778 SPy_r08 SPy_r16 rrl FALSE 0.296 87.000 0.000 NA NA 3811778 398232 SPy_r16 SPy_t36 tRNA-Asn TRUE 0.868 6.000 0.000 NA NA 398232 398233 SPy_t36 SPy_t37 tRNA-Asn tRNA-Arg FALSE 0.333 80.000 0.000 NA NA 398233 100788 SPy_t37 SPy0300 tRNA-Arg comX1.1 TRUE 0.784 26.000 0.000 NA NA 100788 100789 SPy0300 SPy0303 comX1.1 FALSE 0.015 611.000 0.000 1.000 NA 100789 100790 SPy0303 SPy0305 FALSE 0.170 106.000 0.000 1.000 -0.270 100790 100791 SPy0305 SPy0306 TRUE 0.989 0.000 0.555 1.000 0.009 100791 100792 SPy0306 SPy0307 TRUE 0.883 25.000 0.068 NA -0.047 100792 100793 SPy0307 SPy0308 TRUE 0.580 69.000 0.150 NA N -0.201 100793 100794 SPy0308 SPy0309 TRUE 0.987 -3.000 0.199 1.000 Y 0.179 100794 100795 SPy0309 SPy0310 TRUE 0.966 0.000 0.149 NA 0.089 100795 100796 SPy0310 SPy0312 TRUE 0.956 0.000 0.085 NA -0.182 100796 100797 SPy0312 SPy0314 FALSE 0.121 254.000 0.094 NA -0.344 100797 100798 SPy0314 SPy0315 FALSE 0.034 352.000 0.000 NA -0.770 100798 100799 SPy0315 SPy0316 TRUE 0.919 -10.000 0.000 NA -0.412 100799 100800 SPy0316 SPy0317 FALSE 0.089 203.000 0.000 NA 0.648 100800 100801 SPy0317 SPy0319 FALSE 0.025 329.000 0.000 NA N 0.417 100801 100802 SPy0319 SPy0320 FALSE 0.150 250.000 0.000 NA Y -0.707 100802 100803 SPy0320 SPy0321 TRUE 0.991 32.000 0.938 1.000 Y 0.027 100806 100807 SPy0326 SPy0327 ntpJ TRUE 0.997 10.000 0.490 0.005 Y -0.498 100807 100808 SPy0327 SPy0329 ntpJ gidB FALSE 0.280 70.000 0.006 1.000 N 0.063 100809 100810 SPy0330 SPy0331 lemA htpX TRUE 0.854 47.000 0.222 NA 0.822 100810 100811 SPy0331 SPy0334 htpX FALSE 0.086 231.000 0.002 NA -0.779 100811 100812 SPy0334 SPy0337 csrS FALSE 0.019 959.000 0.000 NA 0.697 100812 100813 SPy0337 SPy0338 csrS FALSE 0.076 215.000 0.007 NA N 0.085 100813 100814 SPy0338 SPy0339 TRUE 0.949 -16.000 0.109 NA N -0.201 100814 100815 SPy0339 SPy0340 dnaI TRUE 0.997 1.000 0.817 NA Y 0.111 100815 100816 SPy0340 SPy0341 dnaI pgdA TRUE 0.446 63.000 0.008 1.000 -0.471 100816 100817 SPy0341 SPy0342 pgdA snf FALSE 0.080 207.000 0.004 1.000 -0.122 100817 100818 SPy0342 SPy0343 snf FALSE 0.165 243.000 0.151 NA -0.206 100818 100819 SPy0343 SPy0345 murC TRUE 0.729 40.000 0.013 NA 0.147 100819 100820 SPy0345 SPy0346 murC TRUE 0.623 46.000 0.014 1.000 0.299 100820 100821 SPy0346 SPy0348 TRUE 0.423 112.000 0.120 NA -0.521 100821 100822 SPy0348 SPy0349 greA TRUE 0.887 25.000 0.079 NA -0.475 100823 100824 SPy0351 SPy0352 TRUE 0.433 82.000 0.154 1.000 N -0.596 100824 2137385 SPy0352 SPy_0355 FALSE 0.146 158.000 0.000 NA NA 100825 100826 SPy0356 SPy0357 TRUE 0.702 39.000 0.043 1.000 -0.713 100826 100827 SPy0357 SPy0358 TRUE 0.939 15.000 0.123 NA -0.031 100827 100828 SPy0358 SPy0359 FALSE 0.113 178.000 0.000 NA -0.820 100828 100829 SPy0359 SPy0361 glr FALSE 0.169 178.000 0.014 NA -0.423 100829 100830 SPy0361 SPy0362 glr TRUE 0.911 -3.000 0.034 1.000 N -0.003 100830 100831 SPy0362 SPy0363 TRUE 0.943 -21.000 0.085 1.000 0.108 100831 100832 SPy0363 SPy0364 TRUE 0.946 -3.000 0.065 1.000 -0.356 100832 100833 SPy0364 SPy0365 TRUE 0.955 -3.000 0.111 1.000 -0.451 100833 100834 SPy0365 SPy0366 TRUE 0.941 0.000 0.017 NA -0.395 100834 100835 SPy0366 SPy0367 TRUE 0.993 -3.000 0.570 NA -0.375 100835 100836 SPy0367 SPy0369 TRUE 0.464 123.000 0.224 NA N 0.072 100836 100837 SPy0369 SPy0370 TRUE 0.940 0.000 0.014 NA -0.124 100837 100838 SPy0370 SPy0371 FALSE 0.143 178.000 0.002 NA -0.427 100838 100839 SPy0371 SPy0373 FALSE 0.039 311.000 0.000 NA -0.730 100839 100840 SPy0373 SPy0374 TRUE 0.991 2.000 0.600 NA 0.522 100840 100841 SPy0374 SPy0376 FALSE 0.061 293.000 0.050 1.000 0.248 100841 100842 SPy0376 SPy0377 TRUE 0.934 39.000 0.408 NA NA 100842 100843 SPy0377 SPy0378 hlyX FALSE 0.281 133.000 0.023 NA NA 100843 100844 SPy0378 SPy0379 hlyX pflC TRUE 0.466 78.000 0.028 NA -0.115 100844 100845 SPy0379 SPy0380 pflC FALSE 0.160 131.000 0.023 1.000 N -0.396 100845 100846 SPy0380 SPy0382 TRUE 0.464 76.000 0.015 NA 0.875 100847 100848 SPy0383 SPy0384 fhuG fhuB.1 TRUE 0.981 73.000 0.857 0.041 Y -0.234 100848 100849 SPy0384 SPy0385 fhuB.1 fhuD TRUE 0.971 11.000 0.179 1.000 Y -0.143 100849 100850 SPy0385 SPy0386 fhuD fhuA TRUE 0.993 26.000 0.889 1.000 Y 0.300 100850 100851 SPy0386 SPy0388 fhuA murE FALSE 0.066 246.000 0.062 1.000 N NA 100852 100853 SPy0390 SPy0392 upp FALSE 0.118 168.000 0.002 1.000 -0.919 100853 100854 SPy0392 SPy0393 upp TRUE 0.906 -31.000 0.000 NA NA 100854 100855 SPy0393 SPy0395 clpP FALSE 0.219 121.000 0.000 NA NA 100855 100856 SPy0395 SPy0397 clpP FALSE 0.046 492.000 0.065 NA -0.862 100856 100857 SPy0397 SPy0399 tmk FALSE 0.062 249.000 0.000 NA 0.536 100857 100858 SPy0399 SPy0400 tmk TRUE 0.939 18.000 0.254 1.000 N -0.765 100858 100859 SPy0400 SPy0401 TRUE 0.972 19.000 0.372 NA -0.785 100859 100860 SPy0401 SPy0405 FALSE 0.092 405.000 0.183 NA 0.009 100860 100861 SPy0405 SPy0406 TRUE 0.924 5.000 0.043 NA 0.773 100861 100862 SPy0406 SPy0407 TRUE 0.817 27.000 0.005 NA -0.804 100866 100867 SPy0414 SPy0416 lctO prtS FALSE 0.037 263.000 0.000 1.000 0.005 100867 100868 SPy0416 SPy0421 prtS FALSE 0.019 771.000 0.000 NA -0.390 100868 100869 SPy0421 SPy0422 metS FALSE 0.064 240.000 0.000 NA -0.522 100869 100870 SPy0422 SPy0425 metS nrdF.1 FALSE 0.009 495.000 0.000 1.000 N -0.274 100870 100871 SPy0425 SPy0426 nrdF.1 nrdI TRUE 0.995 4.000 0.643 NA Y 0.941 100871 100872 SPy0426 SPy0427 nrdI nrdE.1 TRUE 0.998 -33.000 1.000 NA Y 0.350 100879 100880 SPy0436 SPy0437 speJ FALSE 0.063 248.000 0.000 NA 0.990 100881 100882 SPy0439 SPy0440 TRUE 0.995 -7.000 0.710 NA 0.783 100882 100883 SPy0440 SPy0441 TRUE 0.441 76.000 0.067 1.000 -0.888 100883 100884 SPy0441 SPy0442 FALSE 0.026 333.000 0.000 1.000 0.456 100884 100885 SPy0442 SPy0443 gcaD FALSE 0.075 173.000 0.002 1.000 N -0.072 100885 100886 SPy0443 SPy0444 gcaD TRUE 0.679 31.000 0.015 1.000 N 0.322 100886 100887 SPy0444 SPy0446 TRUE 0.945 0.000 0.025 NA 0.846 100887 100888 SPy0446 SPy0447 pfs TRUE 0.895 20.000 0.041 NA 0.325 100888 100889 SPy0447 SPy0448 pfs FALSE 0.154 151.000 0.000 NA -0.594 100891 100892 SPy0453 SPy0454 mtsA mtsB TRUE 0.782 64.000 0.135 1.000 Y -0.532 100892 100893 SPy0454 SPy0456 mtsB mtsC TRUE 0.976 1.000 0.130 1.000 Y -0.812 100897 100898 SPy0460 SPy0461 rplK rplA TRUE 0.966 106.000 0.838 0.041 Y 0.892 100898 100899 SPy0461 SPy0462 rplA pyrH FALSE 0.022 323.000 0.002 1.000 N 0.820 100899 100900 SPy0462 SPy0463 pyrH rrf TRUE 0.964 29.000 0.626 1.000 N 0.862 100900 100901 SPy0463 SPy0464 rrf FALSE 0.253 109.000 0.012 1.000 0.861 100901 100902 SPy0464 SPy0466 msrA.2 TRUE 0.391 73.000 0.016 1.000 -0.903 100902 100903 SPy0466 SPy0467 msrA.2 TRUE 0.951 -3.000 0.080 1.000 0.992 100903 100904 SPy0467 SPy0469 FALSE 0.173 156.000 0.023 1.000 -0.068 100904 100905 SPy0469 SPy0470 FALSE 0.039 314.000 0.000 NA -0.534 100905 100906 SPy0470 SPy0471 phoH FALSE 0.177 159.000 0.004 NA -0.146 100906 100907 SPy0471 SPy0472 phoH TRUE 0.568 46.000 0.005 NA N -0.341 100907 100908 SPy0472 SPy0473 FALSE 0.178 159.000 0.003 NA 0.345 100908 100909 SPy0473 SPy0475 dgk TRUE 0.947 -19.000 0.035 NA 0.186 100909 100910 SPy0475 SPy0476 dgk era FALSE 0.288 120.000 0.063 1.000 -0.036 100910 100911 SPy0476 SPy0477 era TRUE 0.828 20.000 0.007 1.000 0.127 100913 100914 SPy0479 SPy0480 TRUE 0.984 15.000 0.500 NA 0.243 100915 100916 SPy0484 SPy0486 FALSE 0.046 294.000 0.000 NA NA 100916 100917 SPy0486 SPy0488 FALSE 0.024 493.000 0.000 NA 0.522 100917 100918 SPy0488 SPy0489 TRUE 0.592 45.000 0.000 NA -0.878 100920 100921 SPy0496 SPy0497 mutR fpg FALSE 0.124 172.000 0.004 1.000 0.673 100921 100922 SPy0497 SPy0498 fpg TRUE 0.924 -3.000 0.066 1.000 N -0.628 100922 100923 SPy0498 SPy0500 FALSE 0.067 190.000 0.000 1.000 -0.933 100923 100924 SPy0500 SPy0501 FALSE 0.211 122.000 0.007 1.000 -0.467 100924 100925 SPy0501 SPy0502 FALSE 0.227 189.000 0.007 0.063 N 0.280 100925 100926 SPy0502 SPy0503 FALSE 0.272 94.000 0.064 1.000 N 0.603 100926 100927 SPy0503 SPy0504 TRUE 0.976 3.000 0.143 0.036 N 0.653 100927 100928 SPy0504 SPy0505 TRUE 0.933 6.000 0.000 1.000 Y 0.066 100929 100930 SPy0506 SPy0507 pcp TRUE 0.870 50.000 0.300 NA 0.080 100930 100931 SPy0507 SPy0508 TRUE 0.996 0.000 0.939 NA -0.336 100931 100932 SPy0508 SPy0510 FALSE 0.079 211.000 0.000 NA -0.538 100932 100933 SPy0510 SPy0511 gloA FALSE 0.177 145.000 0.012 NA N -0.204 100933 100934 SPy0511 SPy0512 gloA TRUE 0.815 11.000 0.019 1.000 N -0.561 100934 100935 SPy0512 SPy0513 pepQ TRUE 0.548 49.000 0.053 1.000 N -0.467 100936 100937 SPy0514 SPy0515 ccpA FALSE 0.167 131.000 0.033 1.000 N -0.299 100937 100938 SPy0515 SPy0516 TRUE 0.997 2.000 0.413 0.012 Y -0.235 100938 100939 SPy0516 SPy0517 thrS FALSE 0.010 422.000 0.000 1.000 N -0.048 100939 100940 SPy0517 SPy0518 thrS FALSE 0.187 141.000 0.012 1.000 0.452 100940 100941 SPy0518 SPy0519 TRUE 0.888 2.000 0.000 NA -0.776 100941 100942 SPy0519 SPy0521 TRUE 0.935 2.000 0.042 NA -0.234 100942 100943 SPy0521 SPy0524 FALSE 0.019 745.000 0.000 NA -0.824 100943 100944 SPy0524 SPy0526 TRUE 0.995 -43.000 0.576 1.000 Y -0.960 100944 100945 SPy0526 SPy0527 TRUE 0.368 95.000 0.030 NA -0.886 100945 100946 SPy0527 SPy0528 vicR FALSE 0.193 162.000 0.013 NA -0.687 100946 100947 SPy0528 SPy0529 vicR vicK TRUE 0.998 -7.000 0.597 0.056 Y -0.752 100947 100948 SPy0529 SPy0530 vicK vicX TRUE 0.900 4.000 0.038 1.000 -0.736 100948 100949 SPy0530 SPy0531 vicX acpA FALSE 0.023 444.000 0.002 1.000 -0.973 100949 100950 SPy0531 SPy0532 acpA smc TRUE 0.925 1.000 0.120 1.000 N 0.374 100952 100953 SPy0534 SPy0535 aroE.2 TRUE 0.880 -3.000 0.000 NA N -0.626 100953 100954 SPy0535 SPy0536 TRUE 0.889 2.000 0.000 NA -0.496 100954 100955 SPy0536 SPy0537 TRUE 0.921 -7.000 0.000 NA -0.961 100955 100956 SPy0537 SPy0538 TRUE 0.851 10.000 0.000 NA 0.313 100956 100957 SPy0538 SPy0539 TRUE 0.916 -16.000 0.000 NA NA 100957 100958 SPy0539 SPy0540 TRUE 0.511 55.000 0.000 NA NA 100958 100959 SPy0540 SPy0542 FALSE 0.020 693.000 0.000 NA 0.912 100959 100960 SPy0542 SPy0543 FALSE 0.222 85.000 0.000 1.000 -0.086 100961 100962 SPy0544 SPy0545 TRUE 0.989 -10.000 0.400 NA NA 100962 100963 SPy0545 SPy0546 FALSE 0.295 85.000 0.000 NA -0.729 100963 100964 SPy0546 SPy0547 TRUE 0.923 -9.000 0.000 NA NA 100964 100965 SPy0547 SPy0549 TRUE 0.988 0.000 0.429 NA NA 100966 100967 SPy0550 SPy0552 TRUE 0.983 -3.000 0.273 NA 0.176 100967 100968 SPy0552 SPy0553 TRUE 0.975 19.000 0.400 NA NA 100968 100969 SPy0553 SPy0555 FALSE 0.244 105.000 0.000 NA NA 100969 100970 SPy0555 SPy0556 TRUE 0.622 42.000 0.000 NA 0.605 100970 100971 SPy0556 SPy0558 FALSE 0.027 414.000 0.000 NA -0.561 100971 100972 SPy0558 SPy0559 TRUE 0.729 24.000 0.000 1.000 0.994 100972 100973 SPy0559 SPy0560 TRUE 0.782 -22.000 0.000 1.000 N -0.322 100973 2137387 SPy0560 SPy_0561 TRUE 0.903 -178.000 0.000 NA NA 2137387 2137388 SPy_0561 SPy_0563 TRUE 0.860 13.000 0.000 NA NA 100975 100976 SPy0567 SPy0568 TRUE 0.992 4.000 0.375 0.020 -0.695 100976 100977 SPy0568 SPy0569 ftsY TRUE 0.971 0.000 0.007 0.082 -0.628 100979 100980 SPy0571 SPy0572 licT TRUE 0.969 2.000 0.259 1.000 0.126 100980 100981 SPy0572 SPy0574 bglA TRUE 0.980 19.000 0.318 1.000 Y -0.297 100982 100983 SPy0575 SPy0576 TRUE 0.996 0.000 0.841 NA -0.650 100986 100987 SPy0580 SPy0581 TRUE 0.979 -13.000 0.215 NA NA 100987 100988 SPy0581 SPy0583 TRUE 0.589 64.000 0.051 NA NA 100988 100989 SPy0583 SPy_0584 ptsK FALSE 0.152 305.000 0.017 NA Y NA 100989 100990 SPy_0584 SPy0585 ptsK lgt TRUE 0.986 -3.000 0.494 1.000 N NA 100990 100991 SPy0585 SPy0587 lgt TRUE 0.901 22.000 0.079 NA 0.113 100991 100992 SPy0587 SPy0588 TRUE 0.979 -7.000 0.206 NA 0.589 100994 100995 SPy0590 SPy0591 TRUE 0.891 91.000 0.156 0.003 Y -0.643 100995 100996 SPy0591 SPy0593 FALSE 0.080 210.000 0.000 NA -0.294 100999 101000 SPy0598 SPy0599 FALSE 0.058 341.000 0.018 NA 0.030 101000 101001 SPy0599 SPy0600 TRUE 0.358 91.000 0.010 NA 0.271 101001 101002 SPy0600 SPy0601 FALSE 0.083 269.000 0.016 NA 0.345 101003 101004 SPy0603 SPy0604 TRUE 0.987 -16.000 0.375 NA NA 101005 101006 SPy0605 SPy0606 bsaA pepF TRUE 0.920 -7.000 0.059 1.000 N -0.791 101007 101008 SPy0608 SPy0609 ppc ftsW FALSE 0.147 140.000 0.028 1.000 N -0.914 101008 101009 SPy0609 SPy0611 ftsW tufA FALSE 0.012 354.000 0.000 1.000 N -0.838 101009 101010 SPy0611 SPy0613 tufA tpi FALSE 0.038 241.000 0.003 1.000 N 0.069 101011 101012 SPy0615 SPy0616 murN murM TRUE 0.996 -13.000 0.200 0.012 Y -0.448 101012 101013 SPy0616 SPy0617 murM TRUE 0.988 0.000 0.500 1.000 -0.496 101013 101014 SPy0617 SPy0619 FALSE 0.160 151.000 0.000 NA NA 101014 101015 SPy0619 SPy0621 TRUE 0.375 72.000 0.000 NA NA 101016 101017 SPy0622 SPy0623 pacL FALSE 0.070 231.000 0.000 NA 0.565 101018 101019 SPy0627 SPy0628 regR TRUE 0.898 64.000 0.562 NA 0.665 101019 101020 SPy0628 SPy0629 agaD TRUE 0.741 87.000 0.375 NA -0.704 101020 101021 SPy0629 SPy0630 agaD agaW TRUE 0.999 -13.000 0.933 0.021 Y -0.632 101021 101022 SPy0630 SPy0631 agaW agaV TRUE 0.998 19.000 0.933 0.021 Y 0.012 101022 101023 SPy0631 SPy0632 agaV ugl TRUE 0.858 36.000 0.200 1.000 0.207 101023 101024 SPy0632 SPy0634 ugl agaF TRUE 0.949 0.000 0.120 1.000 -0.589 101025 101026 SPy0636 SPy0637 idnO TRUE 0.892 25.000 0.197 1.000 N 0.649 101026 101027 SPy0637 SPy0638 kdgK TRUE 0.928 29.000 0.094 1.000 Y 0.794 101027 101028 SPy0638 SPy0639 kdgK kgdA TRUE 0.974 5.000 0.167 1.000 Y 0.192 101028 101029 SPy0639 SPy0640 kgdA FALSE 0.117 290.000 0.000 0.049 0.085 101029 101030 SPy0640 SPy0642 FALSE 0.014 641.000 0.000 1.000 0.435 101030 101031 SPy0642 SPy0643 prfB FALSE 0.102 154.000 0.006 1.000 N 0.561 101031 101032 SPy0643 SPy0644 prfB ftsE TRUE 0.833 19.000 0.053 1.000 N NA 101032 101033 SPy0644 SPy0645 ftsE ftsX TRUE 0.993 -16.000 0.431 1.000 Y NA 2137389 101035 SPy_0647 SPy0649 dinG FALSE 0.235 111.000 0.000 NA NA 101035 101036 SPy0649 SPy0650 dinG aspC FALSE 0.014 335.000 0.000 1.000 N 0.549 101036 101037 SPy0650 SPy0651 aspC asnS TRUE 0.827 21.000 0.068 1.000 N 0.089 101037 101038 SPy0651 SPy0652 asnS FALSE 0.027 414.000 0.000 NA -0.520 101038 101039 SPy0652 SPy0653 TRUE 0.980 -3.000 0.214 NA 0.126 101039 101040 SPy0653 SPy0654 TRUE 0.990 -3.000 0.470 NA -0.394 101041 101042 SPy0655 SPy0656 int1 FALSE 0.212 121.000 0.000 NA -0.304 101042 101043 SPy0656 SPy0657 TRUE 0.772 27.000 0.000 NA 0.395 101044 101045 SPy0658 SPy0659 TRUE 0.394 69.000 0.000 NA NA 101045 101046 SPy0659 SPy0660 TRUE 0.893 2.000 0.000 NA NA 101046 101047 SPy0660 SPy0661 TRUE 0.992 -3.000 0.500 NA NA 101047 101048 SPy0661 SPy0663 TRUE 0.911 0.000 0.000 NA NA 101048 101049 SPy0663 SPy0664 TRUE 0.862 15.000 0.000 NA NA 101049 101050 SPy0664 SPy0665 TRUE 0.639 40.000 0.000 NA 0.632 101050 101051 SPy0665 SPy0666 TRUE 0.992 2.000 0.708 NA -0.717 101051 101052 SPy0666 SPy0667 TRUE 0.807 22.000 0.000 NA -0.555 101052 101053 SPy0667 SPy0669 TRUE 0.909 0.000 0.000 NA 0.001 101053 101054 SPy0669 SPy0670 TRUE 0.853 10.000 0.000 NA NA 101054 101055 SPy0670 SPy0671 TRUE 0.966 -10.000 0.111 NA NA 101055 101056 SPy0671 SPy0672 FALSE 0.049 278.000 0.000 NA 0.202 101056 101057 SPy0672 SPy0673 TRUE 0.952 -7.000 0.018 NA 0.088 101057 101058 SPy0673 SPy0674 TRUE 0.954 -3.000 0.037 NA 0.452 101058 101059 SPy0674 SPy0676 FALSE 0.050 277.000 0.000 NA 0.003 101059 101060 SPy0676 SPy0677 FALSE 0.051 273.000 0.000 NA -0.286 101060 101061 SPy0677 SPy0679 FALSE 0.041 310.000 0.000 NA 0.702 101061 101062 SPy0679 SPy0680 FALSE 0.083 343.000 0.118 NA -0.067 101062 101063 SPy0680 SPy0681 TRUE 0.604 83.000 0.182 NA -0.152 101063 101064 SPy0681 SPy0682 TRUE 0.952 14.000 0.167 NA 0.994 101064 101065 SPy0682 SPy0683 TRUE 0.987 5.000 0.567 NA -0.159 101065 101066 SPy0683 SPy0684 TRUE 0.909 0.000 0.000 NA 0.007 101066 101067 SPy0684 SPy0685 FALSE 0.295 87.000 0.000 NA 0.765 101067 101068 SPy0685 SPy0686 FALSE 0.195 126.000 0.000 NA -0.880 101068 101069 SPy0686 SPy0688 TRUE 0.875 4.000 0.000 NA -0.143 101069 101070 SPy0688 SPy0689 TRUE 0.518 54.000 0.000 NA 0.922 101070 101071 SPy0689 SPy0690 TRUE 0.986 -10.000 0.333 NA NA 101071 101072 SPy0690 SPy0691 TRUE 0.988 0.000 0.438 NA NA 101072 101073 SPy0691 SPy0693 TRUE 0.977 -3.000 0.188 NA NA 101073 101074 SPy0693 SPy0694 TRUE 0.997 0.000 1.000 NA 0.743 101074 101075 SPy0694 SPy0695 TRUE 0.874 129.000 1.000 NA -0.062 101075 101076 SPy0695 SPy0696 TRUE 0.953 4.000 0.150 NA 0.797 101076 101077 SPy0696 SPy0697 TRUE 0.918 -10.000 0.000 NA -0.414 101077 101078 SPy0697 SPy0698 TRUE 0.922 -3.000 0.000 NA 0.422 101078 101079 SPy0698 SPy0700 TRUE 0.978 -3.000 0.200 NA -0.261 101079 101080 SPy0700 SPy0701 hylP1 TRUE 0.923 -3.000 0.000 NA NA 101080 101081 SPy0701 SPy0702 hylP1 TRUE 0.862 15.000 0.000 NA NA 101081 101082 SPy0702 SPy0703 TRUE 0.848 12.000 0.000 NA -0.752 101082 101083 SPy0703 SPy0705 TRUE 0.879 3.000 0.000 NA -0.740 101083 101084 SPy0705 SPy0706 TRUE 0.851 10.000 0.000 NA 0.450 101084 101085 SPy0706 SPy0707 TRUE 0.922 -3.000 0.000 NA 0.202 101085 101086 SPy0707 SPy0710 FALSE 0.219 116.000 0.000 NA -0.175 101087 101088 SPy0711 SPy0712 speC mf2 FALSE 0.163 111.000 0.000 1.000 -0.533 101089 101090 SPy0713 SPy0714 pepD adcA TRUE 0.342 152.000 0.250 1.000 N 0.483 101090 101091 SPy0714 SPy0715 adcA FALSE 0.190 148.000 0.091 1.000 N 0.297 101091 101092 SPy0715 SPy0716 agaS TRUE 0.909 19.000 0.178 1.000 N 0.160 101093 101094 SPy0717 SPy0720 rpmE FALSE 0.263 115.000 0.020 1.000 0.869 101095 101096 SPy0721 SPy0722 FALSE 0.202 176.000 0.167 1.000 N 0.030 101096 101097 SPy0722 SPy0723 TRUE 0.936 -7.000 0.094 1.000 N 0.123 101097 101098 SPy0723 SPy0724 rplS FALSE 0.152 115.000 0.006 1.000 N -0.137 101098 398234 SPy0724 SPy_t38 rplS tRNA-Arg FALSE 0.064 247.000 0.000 NA NA 101099 101100 SPy0726 SPy0727 gyrB TRUE 0.910 1.000 0.013 1.000 0.600 101100 101101 SPy0727 SPy0728 gyrB FALSE 0.023 368.000 0.011 1.000 N -0.234 101104 101105 SPy0732 SPy0733 TRUE 0.561 49.000 0.000 NA -0.148 101105 2137391 SPy0733 SPy_0735 FALSE 0.033 367.000 0.000 NA NA 101106 101107 SPy0737 SPy0738 epf sagA FALSE 0.019 865.000 0.000 NA -0.163 101107 101108 SPy0738 SPy0739 sagA sagB FALSE 0.070 222.000 0.000 NA -0.617 101108 101109 SPy0739 SPy0740 sagB sagC TRUE 0.978 -3.000 0.200 NA 0.040 101109 101110 SPy0740 SPy0741 sagC TRUE 0.965 20.000 0.318 NA -0.209 101110 101111 SPy0741 SPy0742 TRUE 0.963 -25.000 0.136 NA 0.745 101111 101112 SPy0742 SPy0743 TRUE 0.995 -3.000 0.750 NA -0.065 101112 101113 SPy0743 SPy0744 TRUE 0.987 23.000 0.750 NA 0.446 101113 101114 SPy0744 SPy0745 sagH TRUE 0.975 9.000 0.500 1.000 N -0.912 101114 101115 SPy0745 SPy0746 sagH TRUE 0.996 -3.000 0.160 0.008 Y -0.516 101115 101116 SPy0746 SPy0747 FALSE 0.015 571.000 0.000 1.000 0.749 101116 101117 SPy0747 SPy0749 FALSE 0.048 278.000 0.000 NA -0.612 101117 101118 SPy0749 SPy0751 lig FALSE 0.135 194.000 0.010 NA 0.207 101118 101119 SPy0751 SPy0752 lig TRUE 0.818 14.000 0.013 1.000 N -0.060 101119 101120 SPy0752 SPy0754 atpE FALSE 0.019 393.000 0.000 1.000 -0.318 101120 101121 SPy0754 SPy0755 atpE atpB TRUE 0.961 35.000 0.189 0.009 -0.348 101121 101122 SPy0755 SPy0756 atpB atpF TRUE 0.986 18.000 0.032 0.009 Y -0.473 101122 101123 SPy0756 SPy0757 atpF atpH TRUE 0.996 0.000 0.222 0.009 Y -0.853 101123 101124 SPy0757 SPy0758 atpH atpA TRUE 0.999 16.000 0.864 0.009 Y -0.170 101124 101125 SPy0758 SPy0759 atpA atpG TRUE 0.999 16.000 0.846 0.009 Y 0.431 101125 101126 SPy0759 SPy0760 atpG atpD TRUE 0.936 162.000 0.724 0.009 Y -0.534 101126 101127 SPy0760 SPy0761 atpD atpC TRUE 0.999 13.000 0.837 0.009 Y 0.389 101127 101128 SPy0761 SPy0762 atpC FALSE 0.093 266.000 0.039 NA NA 101128 101129 SPy0762 SPy0763 TRUE 0.787 65.000 0.279 NA NA 101129 101130 SPy0763 SPy0764 epuA TRUE 0.945 4.000 0.110 NA NA 101130 101131 SPy0764 SPy0766 epuA endA TRUE 0.614 94.000 0.237 NA NA 101131 101132 SPy0766 SPy_0768 endA pheS FALSE 0.033 283.000 0.000 1.000 NA 101132 101133 SPy_0768 SPy0769 pheS pheT TRUE 0.885 210.000 0.574 0.001 Y NA 101133 101134 SPy0769 SPy0770 pheT FALSE 0.146 110.000 0.002 1.000 N 0.294 101134 101135 SPy0770 SPy0771 TRUE 0.943 -7.000 0.006 NA -0.045 101135 101136 SPy0771 SPy0772 TRUE 0.565 73.000 0.095 NA 0.647 101136 101137 SPy0772 SPy0773 TRUE 0.975 10.000 0.444 1.000 0.268 101139 101140 SPy0776 SPy0777 rexB rexA TRUE 0.991 -3.000 0.070 0.061 Y 0.174 101140 101141 SPy0777 SPy0778 rexA FALSE 0.072 140.000 0.000 1.000 N 0.203 101141 101142 SPy0778 SPy0779 rpsU FALSE 0.206 141.000 0.027 1.000 0.223 101144 101145 SPy0781 SPy0782 dnaG rpoD TRUE 0.934 9.000 0.209 1.000 N -0.330 101145 101146 SPy0782 SPy0783 rpoD FALSE 0.113 236.000 0.044 NA -0.653 101146 101147 SPy0783 SPy0784 rmlD TRUE 0.387 138.000 0.152 NA -0.380 101147 101148 SPy0784 SPy0786 rmlD rgpAc TRUE 0.663 119.000 0.212 1.000 Y -0.038 101148 101149 SPy0786 SPy0787 rgpAc rgpBc TRUE 0.984 -10.000 0.289 NA 0.811 101149 101150 SPy0787 SPy0789 rgpBc rgpCc TRUE 0.889 45.000 0.289 NA -0.016 101150 101151 SPy0789 SPy0790 rgpCc rgpDc TRUE 0.787 0.000 0.000 1.000 N 0.053 101151 101152 SPy0790 SPy0791 rgpDc rgpEc TRUE 0.784 25.000 0.000 NA -0.701 101152 101153 SPy0791 SPy0792 rgpEc rgpFc TRUE 0.988 -3.000 0.385 NA -0.598 101153 101154 SPy0792 SPy0793 rgpFc TRUE 0.970 -3.000 0.000 NA Y -0.064 101154 101155 SPy0793 SPy0794 FALSE 0.260 179.000 0.000 NA Y -0.763 101155 101156 SPy0794 SPy0796 TRUE 0.990 2.000 0.568 NA NA 101156 101157 SPy0796 SPy0797 TRUE 0.954 -7.000 0.027 NA NA 101157 101158 SPy0797 SPy0798 TRUE 0.973 -19.000 0.182 NA 0.924 101158 101159 SPy0798 SPy0799 pepT FALSE 0.266 94.000 0.000 NA 0.986 101159 101160 SPy0799 SPy0800 pepT TRUE 0.751 41.000 0.051 NA -0.708 101162 101163 SPy0802 SPy0803 cmk TRUE 0.867 15.000 0.012 1.000 -0.655 101163 101164 SPy0803 SPy0804 cmk infC FALSE 0.101 162.000 0.010 1.000 N 0.424 101164 101165 SPy0804 SPy0805 infC rpmI TRUE 0.974 42.000 0.652 1.000 Y -0.272 101165 101166 SPy0805 SPy0806 rpmI rplT TRUE 0.991 59.000 0.928 0.028 Y -0.073 101168 101169 SPy0808 SPy0809 aroD TRUE 0.957 -3.000 0.125 1.000 -0.774 101169 101170 SPy0809 SPy0810 aroD aroF TRUE 0.811 94.000 0.004 0.003 Y -0.392 101170 101171 SPy0810 SPy0811 aroF TRUE 0.533 61.000 0.005 NA 0.805 101171 101172 SPy0811 SPy0813 gor FALSE 0.102 221.000 0.010 NA -0.219 101173 101174 SPy0814 SPy0815 folC.2 TRUE 0.942 30.000 0.308 NA -0.399 101175 101176 SPy0816 SPy0817 thiI TRUE 0.905 34.000 0.349 1.000 N 0.350 101176 101177 SPy0817 SPy0818 thiI TRUE 0.579 38.000 0.014 1.000 N -0.634 101177 101178 SPy0818 SPy0819 rplU FALSE 0.032 214.000 0.000 1.000 N 0.586 101178 101179 SPy0819 SPy0821 rplU TRUE 0.980 12.000 0.208 NA Y 0.144 101179 101180 SPy0821 SPy0822 rpmA TRUE 0.964 28.000 0.203 NA Y -0.268 101180 101181 SPy0822 SPy0824 rpmA FALSE 0.014 348.000 0.000 1.000 N NA 101181 101182 SPy0824 SPy0826 lsp TRUE 0.943 -3.000 0.119 1.000 N NA 101182 101183 SPy0826 SPy0827 lsp TRUE 0.930 -10.000 0.082 1.000 N 0.387 101183 101184 SPy0827 SPy0830 pyrR FALSE 0.027 396.000 0.048 1.000 N -0.093 101184 101185 SPy0830 SPy0831 pyrR pyrP TRUE 0.967 16.000 0.140 1.000 Y 0.475 101185 101186 SPy0831 SPy0832 pyrP pyrB TRUE 0.760 61.000 0.064 1.000 Y 0.487 101186 101187 SPy0832 SPy0833 pyrB carA TRUE 0.826 44.000 0.014 1.000 Y 0.398 101187 101188 SPy0833 SPy0835 carA carB TRUE 0.623 226.000 0.117 0.001 Y 0.828 101188 101189 SPy0835 SPy0836 carB FALSE 0.069 207.000 0.017 1.000 N 0.059 101189 101190 SPy0836 SPy0837 TRUE 0.985 24.000 0.923 1.000 N -0.781 101190 101191 SPy0837 SPy0838 TRUE 0.996 12.000 0.923 1.000 Y -0.158 101191 101192 SPy0838 SPy0839 FALSE 0.021 254.000 0.000 1.000 N -0.700 101192 101193 SPy0839 SPy0840 rpsP FALSE 0.121 127.000 0.003 1.000 N -0.679 101193 101194 SPy0840 SPy0841 rpsP TRUE 0.971 10.000 0.385 1.000 -0.110 101194 101195 SPy0841 SPy0843 FALSE 0.013 911.000 0.000 1.000 0.458 101195 101196 SPy0843 SPy0844 TRUE 0.936 20.000 0.200 1.000 NA 101198 101199 SPy0846 SPy0847 FALSE 0.031 215.000 0.000 1.000 N 0.433 101199 101200 SPy0847 SPy0849 trmD TRUE 0.997 -10.000 0.672 1.000 Y -0.238 101200 101201 SPy0849 SPy0850 trmD TRUE 0.866 0.000 0.007 1.000 N 0.031 101201 101202 SPy0850 SPy0851 FALSE 0.201 178.000 0.059 NA 0.164 101202 101203 SPy0851 SPy0852 apbA TRUE 0.974 13.000 0.333 NA -0.140 101203 101204 SPy0852 SPy0853 apbA FALSE 0.021 256.000 0.000 1.000 N -0.232 101204 101205 SPy0853 SPy0854 fruB TRUE 0.997 -3.000 0.721 1.000 Y 0.403 101205 101206 SPy0854 SPy0855 fruB TRUE 0.997 -3.000 0.816 1.000 Y -0.603 101206 101207 SPy0855 SPy0856 mur1.1 FALSE 0.236 93.000 0.022 1.000 N NA 101207 101208 SPy0856 SPy0857 mur1.1 mur1.2 TRUE 0.883 152.000 0.333 0.003 Y NA 2137392 101209 SPy_0858 SPy0861 FALSE 0.023 564.000 0.000 NA NA 2137393 101210 SPy_0863 SPy0864 FALSE 0.100 193.000 0.000 NA NA 101210 101211 SPy0864 SPy0865 TRUE 0.964 0.000 0.139 NA -0.569 101211 101212 SPy0865 SPy0866 papS FALSE 0.233 140.000 0.009 NA 0.082 101212 101213 SPy0866 SPy0867 papS TRUE 0.941 -3.000 0.056 1.000 -0.831 101213 101214 SPy0867 SPy0870 fms FALSE 0.012 893.000 0.000 1.000 -0.123 101216 101217 SPy0873 SPy0874 TRUE 0.992 3.000 0.800 1.000 -0.158 101217 101218 SPy0874 SPy0875 TRUE 0.991 9.000 0.533 1.000 Y 0.301 101218 101219 SPy0875 SPy0876 mvaK1 FALSE 0.019 279.000 0.000 1.000 N 0.170 101219 101220 SPy0876 SPy0877 mvaK1 mvaD TRUE 0.997 -18.000 0.281 0.003 Y -0.276 101220 101221 SPy0877 SPy0878 mvaD mvaK2 TRUE 0.998 -7.000 0.312 0.004 Y -0.065 101221 101222 SPy0878 SPy0879 mvaK2 TRUE 0.936 -7.000 0.097 1.000 N -0.429 101223 101224 SPy0880 SPy0881 mvaS.1 mvaS.2 TRUE 0.986 -13.000 0.183 1.000 Y 0.467 101225 101226 SPy0882 SPy0883 thyA dyr TRUE 0.623 80.000 0.295 1.000 N 0.459 101226 101227 SPy0883 SPy0884 dyr TRUE 0.891 20.000 0.030 NA -0.301 101227 101228 SPy0884 SPy0885 clpX FALSE 0.263 130.000 0.012 NA -0.071 101228 101229 SPy0885 SPy0886 clpX TRUE 0.882 10.000 0.043 1.000 -0.015 101229 101230 SPy0886 SPy0887 FALSE 0.207 148.000 0.004 NA 0.368 101232 101233 SPy0889 SPy0890 rpiA deoB TRUE 0.624 77.000 0.018 1.000 Y -0.060 101233 101234 SPy0890 SPy0891 deoB arsC TRUE 0.868 19.000 0.108 1.000 N 0.059 101234 101235 SPy0891 SPy0892 arsC punA TRUE 0.933 -16.000 0.108 1.000 N 0.433 101235 101236 SPy0892 SPy0894 punA deoD2 FALSE 0.261 663.000 0.040 0.001 Y 0.171 101236 101237 SPy0894 SPy0895 deoD2 TRUE 0.965 -7.000 0.107 NA -0.702 101239 101240 SPy0899 SPy0900 pyrF FALSE 0.050 277.000 0.000 NA 0.130 101240 101241 SPy0900 SPy0901 pyrF pyrE TRUE 0.817 58.000 0.133 1.000 Y 0.981 101241 101242 SPy0901 SPy0902 pyrE amiC FALSE 0.037 197.000 0.000 1.000 N 0.972 101242 101243 SPy0902 SPy0903 amiC TRUE 0.476 82.000 0.182 1.000 N -0.543 101243 101244 SPy0903 SPy0904 TRUE 0.975 29.000 0.125 0.037 Y -0.425 101244 101245 SPy0904 SPy0905 ung FALSE 0.156 133.000 0.025 1.000 N -0.798 101245 101246 SPy0905 SPy0907 ung pyrC FALSE 0.133 132.000 0.009 1.000 N -0.671 101248 101249 SPy0909 SPy0910 parE parC TRUE 0.963 91.000 0.552 0.003 Y 0.192 101249 101250 SPy0910 SPy0911 parC bcaT FALSE 0.234 123.000 0.086 1.000 N -0.032 101250 101251 SPy0911 SPy0912 bcaT TRUE 0.635 64.000 0.095 NA 0.653 101251 398235 SPy0912 SPy_t39 tRNA-Tyr TRUE 0.461 61.000 0.000 NA NA 398235 2137394 SPy_t39 SPy_t40 tRNA-Tyr TRUE 0.534 52.000 0.000 NA NA 2137394 101252 SPy_t40 SPy0913 FALSE 0.211 123.000 0.000 NA NA 101252 398237 SPy0913 SPy_t41 tRNA-Arg FALSE 0.232 113.000 0.000 NA NA 101254 101255 SPy0915 SPy0916 TRUE 0.372 71.000 0.000 NA -0.233 101255 101256 SPy0916 SPy0917 TRUE 0.569 49.000 0.000 NA 0.969 101256 101257 SPy0917 SPy0918 FALSE 0.063 237.000 0.056 1.000 N -0.648 101259 101260 SPy0921 SPy0922 miaA TRUE 0.411 73.000 0.027 1.000 -0.524 101260 101261 SPy0922 SPy0923 TRUE 0.930 -7.000 0.014 1.000 -0.948 101261 101262 SPy0923 SPy0924 TRUE 0.880 15.000 0.022 1.000 -0.815 101262 101263 SPy0924 SPy0925 TRUE 0.941 0.000 0.074 1.000 0.294 101263 101264 SPy0925 SPy0926 recJ TRUE 0.931 -3.000 0.016 1.000 -0.750 101264 101265 SPy0926 SPy0927 recJ apt FALSE 0.204 151.000 0.128 1.000 N -0.726 101265 101266 SPy0927 SPy0928 apt FALSE 0.297 81.000 0.005 NA N -0.759 101266 101267 SPy0928 SPy0929 nth TRUE 0.977 -3.000 0.007 NA Y -0.743 101267 101268 SPy0929 SPy0930 nth TRUE 0.443 72.000 0.006 NA -0.830 101268 101269 SPy0930 SPy0931 TRUE 0.983 -10.000 0.283 NA -0.866 101269 101270 SPy0931 SPy0932 TRUE 0.741 40.000 0.021 NA -0.511 101270 101271 SPy0932 SPy0933 cpsFO TRUE 0.479 58.000 0.059 1.000 N -0.086 101271 101272 SPy0933 SPy0935 cpsFO cpsFP TRUE 0.981 0.000 0.149 1.000 Y 0.948 101272 101273 SPy0935 SPy0936 cpsFP cpsFQ TRUE 0.428 244.000 0.350 1.000 Y -0.179 101274 101275 SPy0937 SPy0938 int3 FALSE 0.139 254.000 0.000 0.059 -0.472 101275 101276 SPy0938 SPy0939 TRUE 0.801 13.000 0.000 1.000 0.314 101281 101282 SPy0945 SPy0946 TRUE 0.630 40.000 0.000 NA -0.630 101282 101283 SPy0946 SPy0947 TRUE 0.727 32.000 0.000 NA NA 101284 101285 SPy0948 SPy0949 FALSE 0.172 142.000 0.000 NA 0.814 2137395 101286 SPy_0951 SPy0952 TRUE 0.893 2.000 0.000 NA NA 101286 101287 SPy0952 SPy0953 FALSE 0.025 483.000 0.000 NA 0.938 101287 101288 SPy0953 SPy0954 TRUE 0.912 -19.000 0.000 NA 0.965 101288 101289 SPy0954 SPy0956 FALSE 0.169 146.000 0.000 NA 0.892 101289 101290 SPy0956 SPy0957 TRUE 0.490 56.000 0.000 NA -0.874 101290 101291 SPy0957 SPy0958 TRUE 0.883 3.000 0.000 NA 0.599 101291 101292 SPy0958 SPy0959 TRUE 0.930 10.000 0.100 NA 0.475 101292 101293 SPy0959 SPy0960 TRUE 0.877 4.000 0.000 NA 0.652 101293 101294 SPy0960 SPy0961 FALSE 0.092 196.000 0.000 NA -0.493 101294 101295 SPy0961 SPy0962 TRUE 0.921 -3.000 0.000 NA -0.310 101295 101296 SPy0962 SPy0963 FALSE 0.122 177.000 0.000 NA NA 101296 101297 SPy0963 SPy0965 TRUE 0.534 52.000 0.000 NA NA 101297 101298 SPy0965 SPy0967 FALSE 0.026 450.000 0.000 NA NA 101298 101299 SPy0967 SPy0968 FALSE 0.040 315.000 0.000 NA NA 101299 101300 SPy0968 SPy0970 TRUE 0.836 19.000 0.000 NA 0.262 101300 101301 SPy0970 SPy0971 TRUE 0.763 28.000 0.000 NA 0.326 101301 101302 SPy0971 SPy0972 TRUE 0.981 -22.000 0.000 0.002 -0.565 101302 2137396 SPy0972 SPy_0973 TRUE 0.855 12.000 0.000 NA NA 2137396 101303 SPy_0973 SPy0975 TRUE 0.916 -16.000 0.000 NA NA 101303 101304 SPy0975 SPy0976 TRUE 0.923 -9.000 0.000 NA NA 101304 101305 SPy0976 SPy0977 TRUE 0.468 60.000 0.000 NA NA 101305 101306 SPy0977 SPy0978 FALSE 0.282 90.000 0.000 NA NA 101306 101307 SPy0978 SPy0979 FALSE 0.197 129.000 0.000 NA NA 101307 101308 SPy0979 SPy0980 TRUE 0.889 2.000 0.000 NA -0.314 101308 101309 SPy0980 SPy0981 FALSE 0.225 112.000 0.000 NA -0.635 101309 101310 SPy0981 SPy0982 TRUE 0.924 10.000 0.077 NA 0.611 101310 101311 SPy0982 SPy0984 TRUE 0.975 3.000 0.286 NA 0.186 101311 101312 SPy0984 SPy0985 TRUE 0.850 12.000 0.000 NA -0.360 101312 101313 SPy0985 SPy0986 TRUE 0.968 12.000 0.286 NA -0.057 101313 101314 SPy0986 SPy0987 TRUE 0.984 -3.000 0.286 NA 0.350 101314 101315 SPy0987 SPy0988 TRUE 0.970 -19.000 0.167 NA -0.692 101315 101316 SPy0988 SPy0989 TRUE 0.994 -3.000 0.667 NA -0.904 101316 101317 SPy0989 SPy0991 TRUE 0.392 97.000 0.062 NA -0.286 101317 101318 SPy0991 SPy0992 TRUE 0.653 60.000 0.093 NA -0.691 101318 101319 SPy0992 SPy0993 TRUE 0.903 42.000 0.312 NA -0.315 101319 101320 SPy0993 SPy0994 TRUE 0.857 15.000 0.000 NA -0.323 101320 101321 SPy0994 SPy0995 TRUE 0.707 33.000 0.000 NA -0.333 101321 101322 SPy0995 SPy0996 TRUE 0.997 -3.000 1.000 NA NA 101322 101323 SPy0996 SPy0997 hylP2 TRUE 0.911 0.000 0.000 NA NA 101323 101324 SPy0997 SPy0998 hylP2 TRUE 0.805 13.000 0.000 1.000 NA 101324 101325 SPy0998 SPy0999 TRUE 0.862 14.000 0.000 NA NA 101325 101326 SPy0999 SPy1001 TRUE 0.885 3.000 0.000 NA NA 101326 101327 SPy1001 SPy1002 TRUE 0.851 11.000 0.000 NA NA 101327 101328 SPy1002 SPy1006 lys FALSE 0.044 294.000 0.000 NA -0.506 101328 101329 SPy1006 SPy1007 lys speI TRUE 0.396 274.000 0.667 1.000 0.216 101329 101330 SPy1007 SPy1008 speI speH TRUE 0.997 26.000 1.000 0.006 -0.656 101330 101331 SPy1008 SPy1010 speH mutX FALSE 0.014 604.000 0.000 1.000 -0.665 101331 101332 SPy1010 SPy1011 mutX TRUE 0.660 58.000 0.074 NA -0.236 101332 101333 SPy1011 SPy1012 TRUE 0.985 -10.000 0.324 NA -0.807 101335 101336 SPy1016 SPy1017 TRUE 0.868 5.000 0.000 NA -0.288 101336 101337 SPy1017 SPy1018 FALSE 0.117 177.000 0.000 NA -0.562 101337 101338 SPy1018 SPy1019 TRUE 0.996 -3.000 0.895 1.000 -0.338 101338 101339 SPy1019 SPy1020 FALSE 0.105 204.000 0.026 1.000 -0.055 101339 101340 SPy1020 SPy1022 estA TRUE 0.383 133.000 0.143 NA -0.233 101340 101341 SPy1022 SPy1024 estA TRUE 0.894 30.000 0.150 NA NA 101341 101342 SPy1024 SPy1025 TRUE 0.716 46.000 0.029 NA NA 101342 101343 SPy1025 SPy1026 acoA FALSE 0.033 285.000 0.000 1.000 0.803 101343 101344 SPy1026 SPy1028 acoA acoB TRUE 0.991 59.000 0.769 0.001 Y -0.557 101344 101345 SPy1028 SPy1029 acoB acoC TRUE 0.564 185.000 0.077 0.045 Y NA 101345 101346 SPy1029 SPy1031 acoC acoL FALSE 0.080 327.000 0.000 1.000 Y NA 101349 101350 SPy1034 SPy1035 TRUE 0.994 0.000 0.796 1.000 -0.358 101351 101352 SPy1036 SPy1037 TRUE 0.992 -3.000 0.502 NA 0.003 101352 101353 SPy1037 SPy1038 TRUE 0.751 54.000 0.150 NA -0.355 101353 101354 SPy1038 SPy1039 FALSE 0.227 134.000 0.003 NA 0.565 101354 101355 SPy1039 SPy1040 hemN TRUE 0.569 63.000 0.021 NA -0.047 101355 101356 SPy1040 SPy1042 hemN FALSE 0.095 194.000 0.060 1.000 N -0.318 101356 101357 SPy1042 SPy1043 TRUE 0.904 0.000 0.055 1.000 N -0.720 101357 101358 SPy1043 SPy1044 TRUE 0.984 0.000 0.330 NA -0.137 101358 101359 SPy1044 SPy1046 FALSE 0.025 480.000 0.000 NA -0.094 101359 101360 SPy1046 SPy1047 TRUE 0.991 0.000 0.546 NA -0.240 101360 101361 SPy1047 SPy1048 TRUE 0.997 -3.000 0.876 NA NA 101361 101362 SPy1048 SPy1049 TRUE 0.982 -10.000 0.253 NA NA 101362 2137397 SPy1049 SPy_1052 FALSE 0.021 647.000 0.000 NA NA 11497900 101362 SPy1049 FALSE NA 103.000 0.000 NA NA 11640263 101362 SPy1049 FALSE NA 103.000 0.000 NA NA 11782655 101362 SPy1049 FALSE NA 103.000 0.000 NA NA 11497901 101362 SPy1049 FALSE NA 139.000 0.000 NA NA 11640264 101362 SPy1049 FALSE NA 139.000 0.000 NA NA 11782656 101362 SPy1049 FALSE NA 139.000 0.000 NA NA 11497902 101362 SPy1049 FALSE NA 169.000 0.000 NA NA 11640265 101362 SPy1049 FALSE NA 169.000 0.000 NA NA 11782657 101362 SPy1049 FALSE NA 169.000 0.000 NA NA 11497903 101362 SPy1049 FALSE NA 205.000 0.000 NA NA 11640266 101362 SPy1049 FALSE NA 205.000 0.000 NA NA 11782658 101362 SPy1049 FALSE NA 205.000 0.000 NA NA 11497904 101362 SPy1049 FALSE NA 235.000 0.000 NA NA 11640267 101362 SPy1049 FALSE NA 235.000 0.000 NA NA 11782659 101362 SPy1049 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SPy1049 FALSE NA 469.000 0.000 NA NA 11640274 101362 SPy1049 FALSE NA 469.000 0.000 NA NA 11782666 101362 SPy1049 FALSE NA 469.000 0.000 NA NA 11497912 101362 SPy1049 FALSE NA 499.000 0.000 NA NA 11640275 101362 SPy1049 FALSE NA 499.000 0.000 NA NA 11782667 101362 SPy1049 FALSE NA 499.000 0.000 NA NA 2137397 101363 SPy_1052 SPy1053 lepA FALSE 0.208 124.000 0.000 NA NA 101363 101364 SPy1053 SPy1054 lepA FALSE 0.043 247.000 0.000 1.000 0.280 101364 101365 SPy1054 SPy1055 csrA FALSE 0.073 186.000 0.000 1.000 0.298 101365 101366 SPy1055 SPy1056 csrA FALSE 0.164 115.000 0.000 1.000 0.498 101366 101367 SPy1056 SPy1057 FALSE 0.058 207.000 0.000 1.000 -0.254 101367 101368 SPy1057 SPy1058 TRUE 0.998 19.000 0.786 0.019 Y -0.619 101368 101369 SPy1058 SPy1059 TRUE 0.995 35.000 0.778 0.023 Y NA 101369 101370 SPy1059 SPy1060 TRUE 0.999 -3.000 0.778 0.023 Y NA 101370 101371 SPy1060 SPy1061 TRUE 0.607 136.000 0.222 0.054 N 0.979 101371 101372 SPy1061 SPy1062 TRUE 0.997 4.000 0.500 0.011 Y -0.369 101372 101373 SPy1062 SPy1063 TRUE 0.831 69.000 0.571 1.000 N -0.221 101373 101374 SPy1063 SPy1064 FALSE 0.247 97.000 0.000 NA -0.388 101374 101375 SPy1064 SPy1065 FALSE 0.037 335.000 0.000 NA 0.065 101375 101376 SPy1065 SPy1066 TRUE 0.826 4.000 0.000 1.000 0.307 101376 101377 SPy1066 SPy1067 gabD TRUE 0.604 95.000 0.044 0.044 -0.693 101377 101378 SPy1067 SPy1068 gabD uvrC FALSE 0.102 102.000 0.000 1.000 N -0.770 101378 101379 SPy1068 SPy1069 uvrC FALSE 0.067 185.000 0.004 1.000 N 0.134 101379 101380 SPy1069 SPy1070 FALSE 0.333 125.000 0.179 1.000 N -0.007 101382 101383 SPy1072 SPy1073 rplJ rplL TRUE 0.988 65.000 0.884 0.026 Y -0.185 101383 101384 SPy1073 SPy1075 rplL FALSE 0.023 530.000 0.000 NA 0.039 101384 101385 SPy1075 SPy1077 FALSE 0.122 175.000 0.000 NA 0.026 101385 2137398 SPy1077 SPy_1078 TRUE 0.793 25.000 0.000 NA NA 2137398 101386 SPy_1078 SPy1080 srtI TRUE 0.861 9.000 0.000 NA NA 101386 101387 SPy1080 SPy1081 srtI srtR FALSE 0.157 151.000 0.000 NA 0.148 101387 101388 SPy1081 SPy1082 srtR srtK TRUE 0.999 -7.000 0.741 0.011 Y -0.323 101388 101389 SPy1082 SPy1083 srtK srtA FALSE 0.116 148.000 0.000 1.000 0.145 101389 101390 SPy1083 SPy1084 srtA srtT FALSE 0.164 115.000 0.000 1.000 0.524 101390 101391 SPy1084 SPy1085 srtT srtF TRUE 0.612 82.000 0.000 0.024 -0.377 101391 101392 SPy1085 SPy1086 srtF srtE TRUE 0.866 6.000 0.000 NA 0.280 101392 101393 SPy1086 SPy1087 srtE srtG TRUE 0.986 3.000 0.490 NA NA 101393 101394 SPy1087 SPy1088 srtG FALSE 0.101 192.000 0.000 NA NA 101394 2137399 SPy1088 SPy_1092 int2 FALSE 0.024 491.000 0.000 NA NA 2137399 101395 SPy_1092 SPy1093 int2 FALSE 0.056 263.000 0.000 NA NA 101397 101398 SPy1096 SPy1097 folC.1 folE TRUE 0.953 11.000 0.057 1.000 Y 0.779 101398 101399 SPy1097 SPy1098 folE folP TRUE 0.959 9.000 0.073 1.000 Y 0.259 101399 101400 SPy1098 SPy1099 folP folQ TRUE 0.963 7.000 0.094 1.000 Y -0.815 101400 101401 SPy1099 SPy1100 folQ folK TRUE 0.983 -3.000 0.142 1.000 Y -0.851 101401 101402 SPy1100 SPy1101 folK murB FALSE 0.113 150.000 0.010 1.000 N -0.825 101402 101403 SPy1101 SPy1102 murB potA TRUE 0.561 46.000 0.041 1.000 N -0.281 101403 101404 SPy1102 SPy1103 potA potB TRUE 0.999 -16.000 0.928 0.035 Y -0.418 101404 101405 SPy1103 SPy1104 potB potC TRUE 0.998 -3.000 0.492 0.035 Y 0.345 101405 101406 SPy1104 SPy1105 potC potD TRUE 0.996 -7.000 0.253 0.035 Y -0.815 101407 101408 SPy1106 SPy1107 TRUE 0.982 -19.000 0.154 1.000 Y -0.511 101409 101410 SPy1109 SPy1110 malP TRUE 0.974 31.000 0.432 1.000 Y 0.233 101412 101413 SPy1113 SPy1114 FALSE 0.079 178.000 0.000 1.000 -0.539 101413 101414 SPy1114 SPy1115 FALSE 0.142 163.000 0.071 1.000 N -0.791 101414 101415 SPy1115 SPy1117 FALSE 0.254 159.000 0.071 NA 0.327 101415 101416 SPy1117 SPy1118 radC TRUE 0.696 49.000 0.046 NA -0.769 101417 101418 SPy1119 SPy1120 TRUE 0.987 10.000 0.714 1.000 -0.021 101418 101419 SPy1120 SPy1121 FALSE 0.120 252.000 0.083 NA -0.377 101419 101420 SPy1121 SPy1122 TRUE 0.973 -10.000 0.166 NA -0.248 101420 101421 SPy1122 SPy1123 prs TRUE 0.980 -3.000 0.089 1.000 Y 0.162 101421 101422 SPy1123 SPy1124 prs FALSE 0.311 140.000 0.145 1.000 0.292 101423 101424 SPy1125 SPy1126 TRUE 0.993 -25.000 0.725 1.000 0.193 101424 101425 SPy1126 SPy1127 TRUE 0.950 -3.000 0.150 1.000 N 0.142 101425 101426 SPy1127 SPy1128 pta TRUE 0.883 4.000 0.067 1.000 N 0.285 101426 2137400 SPy1128 SPy_1129 pta FALSE 0.202 127.000 0.000 NA NA 101428 101429 SPy1133 SPy1134 TRUE 0.980 -13.000 0.382 1.000 N 0.022 101429 101430 SPy1134 SPy1135 FALSE 0.019 278.000 0.000 1.000 N 0.729 101430 101431 SPy1135 SPy1136 xpt FALSE 0.112 305.000 0.009 1.000 Y -0.645 101431 101432 SPy1136 SPy1137 xpt TRUE 0.972 0.000 0.046 1.000 Y -0.974 101433 101434 SPy1138 SPy1139 TRUE 0.752 53.000 0.189 1.000 -0.578 101435 101436 SPy1140 SPy1141 tdk2 prfA TRUE 0.692 35.000 0.062 1.000 N NA 101436 101437 SPy1141 SPy1142 prfA hemK TRUE 0.976 0.000 0.084 1.000 Y NA 101437 101438 SPy1142 SPy1143 hemK TRUE 0.978 -16.000 0.029 NA Y 0.292 101438 101439 SPy1143 SPy1144 TRUE 0.894 18.000 0.012 NA 0.492 101439 101440 SPy1144 SPy1145 glyA TRUE 0.940 -10.000 0.056 1.000 -0.907 101440 101441 SPy1145 SPy1146 glyA TRUE 0.859 7.000 0.000 NA -0.884 101441 101442 SPy1146 SPy1147 TRUE 0.900 1.000 0.000 NA 0.619 101442 101443 SPy1147 SPy1148 TRUE 0.908 10.000 0.035 NA -0.149 101443 101444 SPy1148 SPy1149 TRUE 0.999 -3.000 0.895 0.007 Y -0.095 101444 101445 SPy1149 SPy1150 nox FALSE 0.044 241.000 0.000 1.000 -0.063 101447 101448 SPy1152 SPy1154 gyrA TRUE 0.834 20.000 0.013 NA N -0.811 101448 101449 SPy1154 SPy1155 TRUE 0.357 83.000 0.039 NA N -0.586 101449 101450 SPy1155 SPy1156 FALSE 0.025 487.000 0.000 NA NA 101450 101451 SPy1156 SPy1157 TRUE 0.864 8.000 0.000 NA NA 101452 101453 SPy1158 SPy1159 hlyIII TRUE 0.363 117.000 0.135 1.000 0.365 101453 101454 SPy1159 SPy1160 hlyIII TRUE 0.961 -3.000 0.146 1.000 -0.802 101455 101456 SPy1161 SPy1162 rnh TRUE 0.961 -10.000 0.148 1.000 -0.089 101456 101457 SPy1162 SPy1163 rnh smf TRUE 0.711 65.000 0.037 1.000 Y 0.176 101457 101458 SPy1163 SPy1164 smf topA TRUE 0.703 107.000 0.238 1.000 Y 0.110 101459 101460 SPy1169 SPy1170 ddh TRUE 0.948 15.000 0.158 NA -0.565 101460 101461 SPy1170 SPy1171 ddh satD TRUE 0.369 105.000 0.056 NA -0.342 101461 101462 SPy1171 SPy1172 satD satE TRUE 0.983 -7.000 0.250 NA 0.718 101462 101463 SPy1172 SPy1173 satE gid FALSE 0.208 151.000 0.008 NA -0.544 101463 101464 SPy1173 SPy1174 gid FALSE 0.099 153.000 0.005 1.000 N 0.193 101464 101465 SPy1174 SPy1175 TRUE 0.878 43.000 0.250 NA -0.187 101465 101466 SPy1175 SPy1176 TRUE 0.990 0.000 0.500 NA -0.324 101466 101467 SPy1176 SPy1177 TRUE 0.850 10.000 0.062 1.000 N -0.395 101468 101469 SPy1178 SPy1179 citG TRUE 0.992 -7.000 0.700 1.000 N 0.123 101469 101470 SPy1179 SPy1180 TRUE 0.444 158.000 0.400 1.000 N 0.278 101471 101472 SPy1181 SPy1183 FALSE 0.182 196.000 0.077 NA NA 101472 101473 SPy1183 SPy1184 TRUE 0.660 45.000 0.103 1.000 N NA 101473 101474 SPy1184 SPy1186 citD FALSE 0.201 188.000 0.000 1.000 Y NA 101474 101475 SPy1186 SPy1188 citD citE TRUE 0.994 -12.000 0.284 0.002 N 0.120 101475 101476 SPy1188 SPy1189 citE citF TRUE 0.984 3.000 0.119 0.001 N -0.725 101476 101477 SPy1189 SPy1190 citF citX TRUE 0.946 -7.000 0.138 1.000 N -0.754 101477 101478 SPy1190 SPy1191 citX oadA TRUE 0.934 0.000 0.123 1.000 N 0.974 101479 101480 SPy1192 SPy1193 citC FALSE 0.201 89.000 0.000 1.000 -0.878 101480 101481 SPy1193 SPy1196 FALSE 0.014 700.000 0.000 1.000 0.570 101483 101484 SPy1200 SPy1201 ffh ylxM TRUE 0.933 15.000 0.151 1.000 0.866 101484 101485 SPy1201 SPy1202 ylxM TRUE 0.642 89.000 0.032 0.038 0.925 101485 101486 SPy1202 SPy1203 TRUE 0.655 56.000 0.057 NA 0.427 101488 101489 SPy1205 SPy1206 FALSE 0.022 365.000 0.000 1.000 0.051 101489 101490 SPy1206 SPy1208 TRUE 0.344 113.000 0.040 NA 0.111 101490 101491 SPy1208 SPy1209 pdxK TRUE 0.964 -22.000 0.142 NA -0.200 101493 101494 SPy1211 SPy1212 FALSE 0.027 322.000 0.000 1.000 0.488 101494 101495 SPy1212 SPy1213 fhs.1 FALSE 0.339 85.000 0.094 1.000 N -0.544 101495 101496 SPy1213 SPy1214 fhs.1 lplA TRUE 0.349 128.000 0.200 1.000 N -0.880 101496 101497 SPy1214 SPy1215 lplA TRUE 0.794 47.000 0.250 1.000 N -0.505 101497 101498 SPy1215 SPy1216 TRUE 0.984 -7.000 0.286 NA 0.490 101498 101499 SPy1216 SPy1217 TRUE 0.965 -7.000 0.107 NA -0.545 101499 101500 SPy1217 SPy1218 TRUE 0.940 42.000 0.571 NA N 0.493 101500 101501 SPy1218 SPy1219 TRUE 0.985 -3.000 0.100 NA Y 0.550 101501 101502 SPy1219 SPy1220 TRUE 0.906 -3.000 0.019 1.000 N 0.487 101503 101504 SPy1221 SPy1222 dpfB dfp TRUE 0.914 -7.000 0.002 1.000 -0.221 101504 101505 SPy1222 SPy1223 dfp TRUE 0.603 58.000 0.019 NA -0.502 101505 101506 SPy1223 SPy1224 pgmA FALSE 0.239 176.000 0.098 NA 0.190 101507 101508 SPy1225 SPy1226 TRUE 0.997 2.000 0.720 0.034 -0.620 101508 101509 SPy1226 SPy1227 TRUE 0.988 -7.000 0.438 1.000 NA 101509 101510 SPy1227 SPy1228 FALSE 0.222 139.000 0.036 1.000 NA 101510 101511 SPy1228 SPy1230 cdd TRUE 0.606 94.000 0.300 1.000 -0.921 101511 101512 SPy1230 SPy1232 cdd FALSE 0.008 653.000 0.000 1.000 N 0.090 101513 101514 SPy1233 SPy1234 coaA rpsT FALSE 0.317 69.000 0.014 1.000 N -0.765 101515 101516 SPy1236 SPy1237 TRUE 0.996 -7.000 0.606 1.000 Y -0.262 101516 101517 SPy1237 SPy1239 pepN FALSE 0.035 346.000 0.061 1.000 N -0.652 101517 101518 SPy1239 SPy1240 pepN phoU FALSE 0.121 205.000 0.067 NA N -0.425 101518 101519 SPy1240 SPy1241 phoU pstB TRUE 0.913 68.000 0.413 NA Y -0.424 101519 101520 SPy1241 SPy1242 pstB pstB2 TRUE 0.998 10.000 0.542 0.001 Y -0.212 101520 101521 SPy1242 SPy1243 pstB2 pstC TRUE 0.997 16.000 0.490 0.002 Y 0.123 101521 101522 SPy1243 SPy1244 pstC pstC2 TRUE 0.999 -10.000 0.907 0.002 Y NA 101522 101523 SPy1244 SPy1245 pstC2 pstS TRUE 0.975 11.000 0.206 1.000 Y NA 101523 101524 SPy1245 SPy1246 pstS TRUE 0.486 139.000 0.303 NA N 0.916 101524 101525 SPy1246 SPy1247 TRUE 0.961 3.000 0.229 NA N -0.087 101525 101526 SPy1247 SPy1248 TRUE 0.987 -10.000 0.337 NA -0.234 101526 101527 SPy1248 SPy1249 TRUE 0.964 2.000 0.169 NA 0.104 101527 101528 SPy1249 SPy1250 mreA TRUE 0.549 43.000 0.017 1.000 N -0.076 101528 101529 SPy1250 SPy1251 mreA truB TRUE 0.915 29.000 0.308 1.000 N -0.137 101529 101530 SPy1251 SPy1252 truB FALSE 0.312 116.000 0.014 NA 0.545 101530 101531 SPy1252 SPy1253 TRUE 0.373 97.000 0.045 NA -0.470 101531 101532 SPy1253 SPy1254 TRUE 0.911 11.000 0.045 NA 0.388 101532 101533 SPy1254 SPy1255 TRUE 0.407 92.000 0.121 1.000 -0.647 101533 101534 SPy1255 SPy1257 TRUE 0.988 15.000 0.438 1.000 Y 0.166 101536 101537 SPy1259 SPy1260 TRUE 0.407 163.000 0.238 NA -0.532 101537 101538 SPy1260 SPy1261 TRUE 0.988 8.000 0.600 NA 0.925 101538 101539 SPy1261 SPy1262 TRUE 0.955 41.000 0.600 NA -0.704 101539 101540 SPy1262 SPy1263 TRUE 0.920 13.000 0.060 NA 0.066 101540 101541 SPy1263 SPy1264 TRUE 0.939 11.000 0.143 NA 0.235 101541 101542 SPy1264 SPy1265 TRUE 0.929 37.000 0.357 NA 0.749 101542 101543 SPy1265 SPy1267 pcrA FALSE 0.022 364.000 0.000 1.000 -0.494 101544 101545 SPy1270 SPy1272 TRUE 0.477 120.000 0.060 0.071 N -0.053 101546 101547 SPy1273 SPy1274 cfa FALSE 0.031 370.000 0.000 NA -0.718 101547 101548 SPy1274 SPy1275 TRUE 0.969 16.000 0.154 1.000 Y 0.504 101548 101549 SPy1275 SPy1276 TRUE 0.964 10.000 0.130 1.000 Y 0.927 101549 101550 SPy1276 SPy1277 FALSE 0.203 106.000 0.018 1.000 N 0.923 101550 101551 SPy1277 SPy1280 glmS FALSE 0.066 196.000 0.008 1.000 N 0.978 101551 101552 SPy1280 SPy1281 glmS sipC FALSE 0.087 176.000 0.011 1.000 N -0.170 101552 101553 SPy1281 SPy1282 sipC pyk FALSE 0.081 218.000 0.072 1.000 N -0.248 101553 101554 SPy1282 SPy1283 pyk pfk TRUE 0.961 63.000 0.261 0.006 Y 0.731 101554 101555 SPy1283 SPy1284 pfk dnaE TRUE 0.376 80.000 0.098 1.000 N -0.088 101556 101557 SPy1285 SPy1286 TRUE 0.980 0.000 0.412 1.000 N 0.319 101557 101558 SPy1286 SPy1287 TRUE 0.981 10.000 0.471 NA -0.486 101559 101560 SPy1288 SPy1289 TRUE 0.904 -28.000 0.000 NA -0.105 2137402 101561 SPy_s01 SPy1290 FALSE 0.043 305.000 0.000 NA NA 101562 101563 SPy1291 SPy1292 glgP malM TRUE 0.984 35.000 0.289 0.022 Y 0.268 101563 101564 SPy1292 SPy1293 malM malR TRUE 0.671 115.000 0.538 1.000 N -0.085 101565 101566 SPy1294 SPy1295 malF TRUE 0.782 274.000 0.690 0.034 Y 0.072 101566 101567 SPy1295 SPy1296 malF malG TRUE 0.999 0.000 0.793 0.034 Y -0.350 101567 101568 SPy1296 SPy1297 malG TRUE 0.473 155.000 0.069 0.038 0.319 101569 101570 SPy1298 SPy1299 malA malD TRUE 0.941 22.000 0.200 NA -0.432 101570 101571 SPy1299 SPy1301 malD malC TRUE 0.999 -3.000 0.714 0.034 Y 0.359 101571 101572 SPy1301 SPy1302 malC amyA TRUE 0.672 75.000 0.067 1.000 Y -0.324 101572 101573 SPy1302 SPy1304 amyA amyB TRUE 0.978 26.000 0.024 0.009 Y 0.365 101573 101574 SPy1304 SPy1306 amyB malX TRUE 0.368 166.000 0.065 1.000 Y 0.306 101574 101575 SPy1306 SPy1308 malX FALSE 0.008 615.000 0.000 1.000 N -0.759 101575 101576 SPy1308 SPy1309 dltD TRUE 0.777 31.000 0.042 NA N 0.069 101576 101577 SPy1309 SPy1310 dltD dltC TRUE 0.989 -7.000 0.409 NA -0.455 101577 101578 SPy1310 SPy1311 dltC dltB TRUE 0.976 18.000 0.387 NA 0.777 101578 101579 SPy1311 SPy1312 dltB dltA TRUE 0.987 -3.000 0.435 NA N -0.285 101579 101580 SPy1312 SPy1314 dltA uvrB FALSE 0.010 419.000 0.000 1.000 N -0.327 101581 101582 SPy1315 SPy1316 TRUE 0.990 0.000 0.326 1.000 Y NA 2137403 101583 SPy_1319 SPy1322 FALSE 0.118 178.000 0.000 NA NA 101583 101584 SPy1322 SPy1323 TRUE 0.992 -3.000 0.500 NA 0.142 101584 101585 SPy1323 SPy1324 TRUE 0.997 3.000 0.500 0.014 Y -0.234 101585 101586 SPy1324 SPy1325 TRUE 0.953 23.000 0.064 0.014 N 0.108 101586 101587 SPy1325 SPy1326 FALSE 0.313 106.000 0.064 1.000 -0.160 101587 101588 SPy1326 SPy1328 bglA.2 TRUE 0.980 9.000 0.500 1.000 0.897 101590 101591 SPy1332 SPy_1333 obgE TRUE 0.486 69.000 0.009 NA NA 101592 101593 SPy1335 SPy1336 TRUE 0.965 21.000 0.000 0.054 Y NA 101598 101599 SPy1344 SPy1345 FALSE 0.300 85.000 0.000 NA 0.026 101599 101600 SPy1345 SPy1346 FALSE 0.028 305.000 0.000 1.000 -0.020 101600 101601 SPy1346 SPy1350 psr TRUE 0.603 49.000 0.093 1.000 N -0.826 101601 101602 SPy1350 SPy1351 psr aroK FALSE 0.105 208.000 0.111 1.000 N -0.802 101602 101603 SPy1351 SPy1352 aroK aroA TRUE 0.974 -7.000 0.012 1.000 Y 0.799 101603 101604 SPy1352 SPy1353 aroA FALSE 0.228 102.000 0.003 1.000 0.038 101604 101605 SPy1353 SPy1354 map TRUE 0.978 2.000 0.373 1.000 -0.394 101605 101606 SPy1354 SPy1355 map TRUE 0.939 16.000 0.235 1.000 N -0.826 101606 101607 SPy1355 SPy1356 TRUE 0.961 9.000 0.342 1.000 N -0.469 101607 101608 SPy1356 SPy1357 grab FALSE 0.046 238.000 0.000 1.000 0.856 101608 101609 SPy1357 SPy1358 grab murZ FALSE 0.022 358.000 0.000 1.000 -0.453 101609 101610 SPy1358 SPy1359 murZ metK FALSE 0.104 174.000 0.026 1.000 N -0.726 101610 101611 SPy1359 SPy1361 metK inlA FALSE 0.015 537.000 0.000 1.000 -0.648 101613 101614 SPy1363 SPy1364 dnaX TRUE 0.879 26.000 0.067 NA NA 101614 101615 SPy1364 SPy1365 dnaX TRUE 0.926 0.000 0.030 NA N 0.436 101617 101618 SPy1367 SPy1368 udk TRUE 0.424 80.000 0.010 NA NA 101620 101621 SPy1370 SPy1371 gapN FALSE 0.222 95.000 0.028 1.000 N -0.704 101621 101622 SPy1371 SPy1372 gapN pstI FALSE 0.097 185.000 0.035 1.000 N 0.449 101622 101623 SPy1372 SPy1373 pstI ptsH TRUE 0.994 5.000 0.240 0.013 Y 0.273 101624 101625 SPy1374 SPy1375 nrdH nrdE.2 TRUE 0.802 20.000 0.026 1.000 N 0.383 101625 101626 SPy1375 SPy1378 nrdE.2 nrdF.2 TRUE 0.720 333.000 0.500 0.002 Y -0.271 101626 101627 SPy1378 SPy1379 nrdF.2 TRUE 0.920 -25.000 0.083 1.000 N 0.850 101627 2137404 SPy1379 SPy_1380 FALSE 0.183 138.000 0.000 NA NA 101628 101629 SPy1384 SPy1385 TRUE 0.916 19.000 0.077 NA 0.815 101629 101630 SPy1385 SPy1386 TRUE 0.988 -3.000 0.362 NA NA 101630 101631 SPy1386 SPy1389 alaS FALSE 0.013 361.000 0.000 1.000 N NA 101631 101632 SPy1389 SPy1390 alaS FALSE 0.011 387.000 0.000 1.000 N -0.028 101632 101633 SPy1390 SPy1391 TRUE 0.464 63.000 0.012 1.000 0.010 101633 101634 SPy1391 SPy1392 TRUE 0.438 66.000 0.012 1.000 NA 101634 101635 SPy1392 SPy1393 pepB FALSE 0.012 376.000 0.000 1.000 N NA 101635 101636 SPy1393 SPy1395 pepB TRUE 0.958 13.000 0.204 NA -0.647 101636 101637 SPy1395 SPy1398 FALSE 0.043 426.000 0.020 NA -0.334 101637 101638 SPy1398 SPy1399 nagB FALSE 0.203 119.000 0.051 1.000 N -0.451 101639 101640 SPy1400 SPy1401 queA TRUE 0.891 7.000 0.004 NA -0.362 101641 101642 SPy1402 SPy1404 TRUE 0.920 -3.000 0.000 NA -0.432 101642 101643 SPy1404 SPy1405 TRUE 0.917 -15.000 0.000 NA NA 101643 101644 SPy1405 SPy1406 sodA FALSE 0.135 167.000 0.000 NA NA 101644 101645 SPy1406 SPy1407 sodA holA FALSE 0.190 97.000 0.012 1.000 N -0.691 101645 101646 SPy1407 SPy1408 holA comEC TRUE 0.596 71.000 0.163 1.000 0.845 101646 101647 SPy1408 SPy1409 comEC comEA TRUE 0.952 -19.000 0.130 1.000 -0.141 101647 101648 SPy1409 SPy1410 comEA FALSE 0.066 200.000 0.014 1.000 N -0.921 101649 101650 SPy1411 SPy1412 TRUE 0.973 -10.000 0.209 1.000 -0.180 101651 101652 SPy1414 SPy1415 deaD FALSE 0.142 128.000 0.007 1.000 N 0.901 101652 101653 SPy1415 SPy1416 deaD prfC FALSE 0.083 307.000 0.000 1.000 Y -0.824 101653 101654 SPy1416 SPy1419 prfC FALSE 0.078 248.000 0.003 NA -0.683 101654 101655 SPy1419 SPy1420 murF TRUE 0.502 80.000 0.078 NA -0.982 101655 101656 SPy1420 SPy1421 murF ddlA TRUE 0.588 191.000 0.046 0.010 Y -0.339 101656 101657 SPy1421 SPy1422 ddlA recR FALSE 0.183 101.000 0.010 1.000 N -0.222 101657 2137405 SPy1422 SPy_1423 recR TRUE 0.586 47.000 0.000 NA NA 2137405 101658 SPy_1423 SPy1424 FALSE 0.023 561.000 0.000 NA NA 101658 101659 SPy1424 SPy1425 TRUE 0.377 124.000 0.105 NA 0.482 101659 101660 SPy1425 SPy1427 FALSE 0.278 161.000 0.107 NA 0.706 101660 101661 SPy1427 SPy1429 gpmA FALSE 0.247 107.000 0.012 1.000 -0.793 101664 101665 SPy1436 SPy1437 mf3 FALSE 0.075 220.000 0.000 NA NA 101666 101667 SPy1438 SPy1440 FALSE 0.226 116.000 0.000 NA NA 101667 101668 SPy1440 SPy1441 TRUE 0.923 -3.000 0.000 NA NA 101668 101669 SPy1441 SPy1442 TRUE 0.853 10.000 0.000 NA NA 101669 101670 SPy1442 SPy1443 TRUE 0.885 3.000 0.000 NA NA 101670 101671 SPy1443 SPy1444 TRUE 0.855 12.000 0.000 NA NA 101671 101672 SPy1444 SPy1445 hylP3 TRUE 0.857 15.000 0.000 NA -0.522 101672 101673 SPy1445 SPy1446 hylP3 TRUE 0.907 0.000 0.000 NA -0.688 101673 101674 SPy1446 SPy1447 TRUE 0.994 -3.000 0.667 NA 0.643 101674 101675 SPy1447 SPy1448 TRUE 0.976 -3.000 0.188 NA -0.891 101675 101676 SPy1448 SPy1449 TRUE 0.979 0.000 0.250 NA 0.232 101676 101677 SPy1449 SPy1450 TRUE 0.993 15.000 0.833 NA -0.298 101677 101678 SPy1450 SPy1451 TRUE 0.959 11.000 0.222 NA -0.512 101678 101679 SPy1451 SPy1452 TRUE 0.980 12.000 0.444 NA 0.468 101679 101680 SPy1452 SPy1453 TRUE 0.994 1.000 0.750 NA -0.911 101680 101681 SPy1453 SPy1454 TRUE 0.991 -7.000 0.467 NA -0.261 101681 101682 SPy1454 SPy1455 TRUE 0.993 -31.000 0.667 NA -0.798 101682 101683 SPy1455 SPy1456 TRUE 0.846 10.000 0.000 NA -0.930 101683 101684 SPy1456 SPy1457 TRUE 0.907 0.000 0.000 NA -0.776 101684 101685 SPy1457 SPy1459 TRUE 0.967 25.000 0.417 NA -0.401 101685 101686 SPy1459 SPy1460 TRUE 0.693 81.000 0.263 NA -0.048 101686 101687 SPy1460 SPy1461 FALSE 0.237 110.000 0.000 NA NA 101687 101688 SPy1461 SPy1462 TRUE 0.925 -7.000 0.000 NA NA 101688 101689 SPy1462 SPy1463 TRUE 0.906 -31.000 0.000 NA NA 101689 101690 SPy1463 SPy1464 TRUE 0.868 6.000 0.000 NA NA 101690 101691 SPy1464 SPy1465 TRUE 0.987 -7.000 0.353 NA -0.854 101691 101692 SPy1465 SPy1466 TRUE 0.923 -3.000 0.000 NA 0.733 101692 101693 SPy1466 SPy1468 FALSE 0.160 149.000 0.000 NA -0.146 101693 101694 SPy1468 SPy1469 FALSE 0.233 109.000 0.000 NA -0.077 101694 101695 SPy1469 SPy1470 FALSE 0.054 268.000 0.000 NA NA 101695 101696 SPy1470 SPy1471 TRUE 0.893 2.000 0.000 NA NA 101696 101697 SPy1471 SPy1473 FALSE 0.310 84.000 0.000 NA NA 101697 101698 SPy1473 SPy1474 TRUE 0.923 -3.000 0.000 NA NA 101698 101699 SPy1474 SPy1475 FALSE 0.244 105.000 0.000 NA NA 101699 101700 SPy1475 SPy1476 TRUE 0.923 -7.000 0.000 NA 0.096 101700 101701 SPy1476 SPy1477 TRUE 0.922 -3.000 0.000 NA 0.339 101701 101702 SPy1477 SPy1478 TRUE 0.911 0.000 0.000 NA NA 101702 101703 SPy1478 SPy1479 TRUE 0.504 56.000 0.000 NA NA 101703 101704 SPy1479 SPy1481 FALSE 0.170 146.000 0.000 NA NA 101704 101705 SPy1481 SPy1482 TRUE 0.913 -19.000 0.000 NA NA 101705 2137406 SPy1482 SPy_1482a FALSE 0.204 126.000 0.000 NA NA 2137406 101706 SPy_1482a SPy1483 TRUE 0.911 0.000 0.000 NA NA 101706 101707 SPy1483 SPy1484 xis TRUE 0.893 2.000 0.000 NA NA 101707 101708 SPy1484 SPy1485 xis FALSE 0.053 270.000 0.000 NA 0.695 101709 101710 SPy1486 SPy1487 TRUE 0.848 12.000 0.000 NA -0.871 101710 101711 SPy1487 SPy1488 int2 FALSE 0.200 124.000 0.000 NA -0.721 101712 101713 SPy1489 SPy1491 hlpA TRUE 0.495 99.000 0.156 NA -0.479 101713 101714 SPy1491 SPy1492 TRUE 0.995 -22.000 0.828 NA -0.938 101714 101715 SPy1492 SPy1493 TRUE 0.974 -25.000 0.203 NA 0.031 101715 101716 SPy1493 SPy1494 FALSE 0.070 228.000 0.000 NA -0.199 101716 101717 SPy1494 SPy1495 recN FALSE 0.090 172.000 0.000 1.000 0.339 101717 101718 SPy1495 SPy1496 recN TRUE 0.796 22.000 0.037 1.000 N NA 101718 101719 SPy1496 SPy1497 hlyA1 TRUE 0.913 -13.000 0.048 1.000 N NA 101719 101720 SPy1497 SPy1498 hlyA1 fps TRUE 0.920 -7.000 0.058 1.000 N -0.874 101720 101721 SPy1498 SPy1499 fps xseB TRUE 0.927 0.000 0.100 1.000 N 0.442 101721 101722 SPy1499 SPy1500 xseB xseA TRUE 0.998 -22.000 0.412 0.001 Y -0.952 101722 101723 SPy1500 SPy1502 xseA folD FALSE 0.139 153.000 0.045 1.000 N -0.181 101723 101724 SPy1502 SPy1503 folD FALSE 0.061 208.000 0.013 1.000 N -0.651 101724 101725 SPy1503 SPy1505 phr FALSE 0.073 178.000 0.004 1.000 N 0.522 101725 101726 SPy1505 SPy1506 phr FALSE 0.068 149.000 0.000 1.000 N 0.502 101726 101727 SPy1506 SPy1507 TRUE 0.996 0.000 0.640 1.000 Y -0.141 101727 101728 SPy1507 SPy1508 FALSE 0.305 127.000 0.044 NA -0.328 101729 101730 SPy1509 SPy1510 clpE mutT FALSE 0.217 128.000 0.079 1.000 N 0.387 101730 101731 SPy1510 SPy1511 mutT TRUE 0.740 51.000 0.114 NA 0.773 101732 101733 SPy1513 SPy1514 ileS divIVAS FALSE 0.055 273.000 0.012 NA N 0.085 101733 101734 SPy1514 SPy1515 divIVAS TRUE 0.986 10.000 0.579 NA 0.917 101734 101735 SPy1515 SPy1516 TRUE 0.977 0.000 0.287 1.000 0.139 101735 101736 SPy1516 SPy1518 TRUE 0.979 5.000 0.370 NA -0.214 101736 101737 SPy1518 SPy1519 TRUE 0.954 12.000 0.194 NA -0.825 101737 101738 SPy1519 SPy1520 ftsZ TRUE 0.927 3.000 0.030 NA -0.397 101738 101739 SPy1520 SPy1521 ftsZ ftsA TRUE 0.983 24.000 0.460 1.000 Y 0.099 101739 101740 SPy1521 SPy1523 ftsA divIB FALSE 0.334 212.000 0.389 NA N -0.148 101740 101741 SPy1523 SPy_1524 divIB murG TRUE 0.978 1.000 0.072 NA Y NA 101741 101742 SPy_1524 SPy1525 murG murD TRUE 0.974 -21.000 0.060 1.000 Y NA 101742 101743 SPy1525 SPy1526 murD FALSE 0.041 384.000 0.006 NA -0.407 101743 101744 SPy1526 SPy1527 FALSE 0.302 122.000 0.015 NA 0.991 101744 101745 SPy1527 SPy1528 FALSE 0.098 183.000 0.003 NA N -0.669 101745 101746 SPy1528 SPy1529 glcK TRUE 0.891 10.000 0.064 NA N 0.121 101746 101747 SPy1529 SPy1530 glcK TRUE 0.984 5.000 0.496 NA -0.532 101747 101748 SPy1530 SPy1531 dpr FALSE 0.281 142.000 0.058 NA 0.036 101750 101751 SPy1533 SPy1534 TRUE 0.917 4.000 0.016 NA -0.731 101751 101752 SPy1534 SPy1535 FALSE 0.027 424.000 0.000 NA 0.012 101752 101753 SPy1535 SPy1536 FALSE 0.011 414.000 0.000 1.000 N 0.665 101753 101754 SPy1536 SPy1537 kdtB TRUE 0.912 -13.000 0.052 1.000 N -0.223 101754 101755 SPy1537 SPy1538 kdtB TRUE 0.980 -10.000 0.367 1.000 N -0.777 101755 101756 SPy1538 SPy1539 asnA FALSE 0.142 123.000 0.006 1.000 N -0.265 101756 101757 SPy1539 SPy1541 asnA arcC FALSE 0.083 313.000 0.000 1.000 Y 0.780 101757 101758 SPy1541 SPy1542 arcC TRUE 0.940 20.000 0.035 1.000 Y -0.983 101758 101759 SPy1542 SPy1543 TRUE 0.921 17.000 0.140 1.000 -0.048 101759 101760 SPy1543 SPy1544 arcB FALSE 0.205 170.000 0.104 1.000 -0.733 101760 101761 SPy1544 SPy1546 arcB TRUE 0.756 40.000 0.104 1.000 0.241 101761 101762 SPy1546 SPy1547 sagP (arcA) FALSE 0.311 100.000 0.056 1.000 -0.556 101762 101763 SPy1547 SPy1548 sagP (arcA) FALSE 0.019 274.000 0.000 1.000 N -0.760 101765 101766 SPy1551 SPy1552 TRUE 0.899 14.000 0.009 NA 0.096 101766 2137407 SPy1552 SPy_1553 TRUE 0.367 73.000 0.000 NA NA 2137407 101767 SPy_1553 SPy1556 TRUE 0.923 -3.000 0.000 NA NA 101767 101768 SPy1556 SPy1557 msrA TRUE 0.590 88.000 0.240 1.000 0.533 101768 101769 SPy1557 SPy1558 msrA TRUE 0.984 43.000 0.875 1.000 Y 0.086 101769 101770 SPy1558 SPy1559 ccdA TRUE 0.990 13.000 0.500 1.000 Y -0.966 101770 101771 SPy1559 SPy1561 ccdA FALSE 0.008 538.000 0.000 1.000 N -0.984 11497913 101767 SPy1556 FALSE NA 2742.000 0.000 NA NA 11640276 101767 SPy1556 FALSE NA 2742.000 0.000 NA NA 11782668 101767 SPy1556 FALSE NA 2742.000 0.000 NA NA 11497914 101767 SPy1556 FALSE NA 2775.000 0.000 NA NA 11640277 101767 SPy1556 FALSE NA 2775.000 0.000 NA NA 11782669 101767 SPy1556 FALSE NA 2775.000 0.000 NA NA 11497915 101767 SPy1556 FALSE NA 2808.000 0.000 NA NA 11640278 101767 SPy1556 FALSE NA 2808.000 0.000 NA NA 11782670 101767 SPy1556 FALSE NA 2808.000 0.000 NA NA 11497916 101767 SPy1556 FALSE NA 2841.000 0.000 NA NA 11640279 101767 SPy1556 FALSE NA 2841.000 0.000 NA NA 11782671 101767 SPy1556 FALSE NA 2841.000 0.000 NA NA 11497917 101767 SPy1556 FALSE NA 2873.000 0.000 NA NA 11640280 101767 SPy1556 FALSE NA 2873.000 0.000 NA NA 11782672 101767 SPy1556 FALSE NA 2873.000 0.000 NA NA 11497918 101767 SPy1556 FALSE NA 2906.000 0.000 NA NA 11640281 101767 SPy1556 FALSE NA 2906.000 0.000 NA NA 11782673 101767 SPy1556 FALSE NA 2906.000 0.000 NA NA 11497919 101767 SPy1556 FALSE NA 2940.000 0.000 NA NA 11640282 101767 SPy1556 FALSE NA 2940.000 0.000 NA NA 11782674 101767 SPy1556 FALSE NA 2940.000 0.000 NA NA 101771 101772 SPy1561 SPy1562 TRUE 0.996 11.000 0.882 1.000 Y 0.469 101772 101773 SPy1562 SPy1563 TRUE 0.998 -3.000 0.773 NA Y -0.433 101773 101774 SPy1563 SPy1564 TRUE 0.996 2.000 0.711 NA Y -0.224 101774 101775 SPy1564 SPy1565 TRUE 0.995 5.000 0.948 NA -0.484 101775 101776 SPy1565 SPy1566 TRUE 0.996 0.000 0.891 NA 0.183 101776 101777 SPy1566 SPy1567 TRUE 0.769 133.000 0.664 NA 0.529 101777 101778 SPy1567 SPy1568 valS FALSE 0.103 154.000 0.000 1.000 -0.283 101778 101779 SPy1568 SPy1569 valS TRUE 0.921 2.000 0.008 NA -0.309 101779 101780 SPy1569 SPy1570 TRUE 0.954 -3.000 0.033 NA 0.532 101780 101781 SPy1570 SPy1571 FALSE 0.027 425.000 0.000 NA 0.887 101781 101782 SPy1571 SPy1572 TRUE 0.846 18.000 0.000 NA 0.444 398238 101783 SPy_t42 SPy1574 tRNA-Thr FALSE 0.100 193.000 0.000 NA NA 101783 101784 SPy1574 SPy1575 TRUE 0.873 5.000 0.000 NA NA 101784 101785 SPy1575 SPy1576 TRUE 0.533 52.000 0.000 NA 0.927 101785 101786 SPy1576 SPy1577 aroB TRUE 0.924 56.000 0.003 0.003 Y 0.871 101787 101788 SPy1580 SPy1581 TRUE 0.890 2.000 0.000 NA -0.191 101788 101789 SPy1581 SPy1582 TRUE 0.647 53.000 0.026 NA 0.051 101789 101790 SPy1582 SPy1584 aroE FALSE 0.025 235.000 0.000 1.000 N -0.565 101790 101791 SPy1584 SPy1586 aroE FALSE 0.178 138.000 0.061 1.000 N -0.360 101791 101792 SPy1586 SPy1587 TRUE 0.945 -70.000 0.167 1.000 N 0.868 101792 101793 SPy1587 SPy1588 TRUE 0.995 0.000 0.167 0.010 Y 0.236 101793 101794 SPy1588 SPy1589 TRUE 0.994 -10.000 0.667 NA 0.610 101794 101795 SPy1589 SPy1591 FALSE 0.042 306.000 0.000 NA NA 101795 101796 SPy1591 SPy1592 TRUE 0.907 -28.000 0.000 NA NA 101796 101797 SPy1592 SPy1593 TRUE 0.933 81.000 0.333 0.032 Y -0.549 101797 101798 SPy1593 SPy1595 TRUE 0.998 10.000 0.917 0.032 Y -0.454 101800 101801 SPy1599 SPy1600 TRUE 0.912 24.000 0.182 1.000 -0.678 101801 101802 SPy1600 SPy1602 TRUE 0.827 51.000 0.286 1.000 -0.620 101803 101804 SPy1603 SPy1604 TRUE 0.945 15.000 0.194 1.000 -0.730 101805 101806 SPy1605 SPy1606 FALSE 0.013 665.000 0.000 NA N -0.293 101807 101808 SPy1607 SPy1608 TRUE 0.447 80.000 0.025 NA -0.644 101808 101809 SPy1608 SPy1610 FALSE 0.033 370.000 0.000 NA NA 398256 398255 SPy_t43 SPy_t44 tRNA-Glu tRNA-Ile TRUE 0.808 23.000 0.000 NA NA 398255 398254 SPy_t44 SPy_t45 tRNA-Ile tRNA-Thr TRUE 0.674 36.000 0.000 NA NA 398254 398253 SPy_t45 SPy_t46 tRNA-Thr tRNA-Leu TRUE 0.851 11.000 0.000 NA NA 398253 398252 SPy_t46 SPy_t47 tRNA-Leu tRNA-Lys TRUE 0.868 6.000 0.000 NA NA 398252 398251 SPy_t47 SPy_t48 tRNA-Lys tRNA-Asp TRUE 0.727 32.000 0.000 NA NA 398251 398250 SPy_t48 SPy_t49 tRNA-Asp tRNA-Val TRUE 0.847 18.000 0.000 NA NA 398250 3811779 SPy_t49 SPy_r17 tRNA-Val TRUE 0.847 18.000 0.000 NA NA 3811779 407268 SPy_r17 SPy_r09 rrl FALSE 0.296 87.000 0.000 NA NA 407268 398249 SPy_r09 SPy_t50 rrl tRNA-Ala FALSE 0.045 296.000 0.000 NA NA 398249 3811780 SPy_t50 SPy_r10 tRNA-Ala TRUE 0.555 50.000 0.000 NA NA 3811780 101810 SPy_r10 SPy1613 FALSE 0.019 881.000 0.000 NA NA 101810 101811 SPy1613 SPy1615 comFC TRUE 0.513 80.000 0.080 NA 0.828 101811 101812 SPy1615 SPy1616 comFC comFA TRUE 0.960 -28.000 0.130 NA 0.020 101813 101814 SPy1617 SPy1618 cysM FALSE 0.234 128.000 0.033 1.000 -0.640 101815 2137409 SPy1619 SPy_1620 TRUE 0.911 0.000 0.000 NA NA 2137409 101816 SPy_1620 SPy1621 TRUE 0.666 37.000 0.000 NA NA 101816 101817 SPy1621 SPy1622 TRUE 0.999 -7.000 0.853 0.010 Y -0.548 101817 101818 SPy1622 SPy1623 TRUE 0.942 54.000 0.679 NA 0.119 101818 101819 SPy1623 SPy1625 TRUE 0.510 72.000 0.039 NA 0.279 101819 101820 SPy1625 SPy1626 pppL TRUE 0.997 -3.000 0.704 1.000 Y -0.397 101820 101821 SPy1626 SPy1627 pppL sunL TRUE 0.670 38.000 0.074 1.000 N -0.655 101821 101822 SPy1627 SPy1628 sunL fmt TRUE 0.991 -10.000 0.305 1.000 Y -0.218 101822 101823 SPy1628 SPy1629 fmt priA TRUE 0.432 62.000 0.052 1.000 N -0.199 101823 101824 SPy1629 SPy1630 priA TRUE 0.697 65.000 0.032 0.050 N 0.031 101824 101825 SPy1630 SPy1632 gmk TRUE 0.967 19.000 0.471 1.000 N -0.266 101825 101826 SPy1632 SPy1633 gmk FALSE 0.244 110.000 0.010 1.000 0.199 101826 101827 SPy1633 SPy1634 FALSE 0.192 130.000 0.006 1.000 0.556 101828 101829 SPy1637 SPy1638 atoB atoD.1 TRUE 0.952 24.000 0.150 1.000 Y -0.957 101829 101830 SPy1638 SPy1639 atoD.1 atoA TRUE 0.996 2.000 0.200 0.002 Y -0.780 101830 101831 SPy1639 SPy1640 atoA TRUE 0.967 33.000 0.111 0.039 Y -0.853 101831 101832 SPy1640 SPy1641 TRUE 0.697 71.000 0.333 1.000 N -0.990 101832 101833 SPy1641 SPy_1642 luxS TRUE 0.875 -16.000 0.006 1.000 N NA 101834 101835 SPy1643 SPy1644 TRUE 0.913 14.000 0.029 NA 0.125 101835 101836 SPy1644 SPy1646 FALSE 0.025 445.000 0.000 NA -0.570 101836 101837 SPy1646 SPy1647 TRUE 0.768 122.000 0.579 NA -0.608 101838 101839 SPy1648 SPy1649 recU pbp1A TRUE 0.981 -13.000 0.319 1.000 0.160 101840 101841 SPy1651 SPy1652 pepC nadE FALSE 0.086 185.000 0.017 1.000 N -0.113 101841 101842 SPy1652 SPy1653 nadE TRUE 0.996 2.000 0.194 0.002 Y 0.446 101842 101843 SPy1653 SPy1654 aapA FALSE 0.110 171.000 0.032 1.000 N -0.971 101843 101844 SPy1654 SPy1656 aapA FALSE 0.019 1150.000 0.000 NA NA 101844 101845 SPy1656 SPy1657 TRUE 0.685 104.000 0.364 NA NA 101845 101846 SPy1657 SPy1658 TRUE 0.990 0.000 0.310 1.000 Y NA 101846 101847 SPy1658 SPy1659 FALSE 0.077 195.000 0.018 1.000 N -0.341 101847 101848 SPy1659 SPy1662 mraY FALSE 0.100 158.000 0.007 1.000 N 0.248 101848 101849 SPy1662 SPy1664 mraY pbpX TRUE 0.966 2.000 0.038 1.000 Y 0.609 101849 101850 SPy1664 SPy1665 pbpX ftsL TRUE 0.975 4.000 0.456 1.000 N 0.267 101850 101851 SPy1665 SPy1666 ftsL TRUE 0.882 5.000 0.077 1.000 N 0.116 101851 101852 SPy1666 SPy1670 proA FALSE 0.015 474.000 0.003 1.000 N -0.213 101852 101853 SPy1670 SPy1672 proA proB TRUE 0.998 -7.000 0.281 0.002 Y 0.357 101853 101854 SPy1672 SPy1673 proB TRUE 0.496 65.000 0.006 NA -0.630 101854 101855 SPy1673 SPy1674 TRUE 0.977 5.000 0.341 NA -0.015 101855 101856 SPy1674 SPy1675 TRUE 0.861 34.000 0.136 NA 0.460 101856 101857 SPy1675 SPy_1676 tkt TRUE 0.377 193.000 0.300 NA NA 101857 101858 SPy_1676 SPy1678 tkt FALSE 0.153 218.000 0.000 1.000 Y NA 101858 101859 SPy1678 SPy1680 FALSE 0.198 126.000 0.000 NA -0.254 101859 101860 SPy1680 SPy1681 TRUE 0.990 -10.000 0.462 NA -0.336 101860 101861 SPy1681 SPy1682 glpF TRUE 0.624 108.000 0.364 1.000 -0.326 101861 101862 SPy1682 SPy1683 glpF glpO TRUE 0.981 2.000 0.500 1.000 N -0.923 101862 101863 SPy1683 SPy1684 glpO glpK TRUE 0.998 16.000 0.500 0.001 Y 0.674 101863 101864 SPy1684 SPy1686 glpK FALSE 0.023 360.000 0.000 1.000 0.588 101864 101865 SPy1686 SPy1687 TRUE 0.532 67.000 0.029 NA -0.344 101865 101866 SPy1687 SPy1688 glyS FALSE 0.223 154.000 0.020 NA -0.591 101866 101867 SPy1688 SPy1689 glyS glyQ TRUE 0.756 378.000 0.651 0.001 Y 0.178 101867 101868 SPy1689 SPy1691 glyQ FALSE 0.021 372.000 0.000 1.000 0.174 101868 101869 SPy1691 SPy1693 FALSE 0.322 111.000 0.074 1.000 0.292 101869 101870 SPy1693 SPy1694 nagA FALSE 0.262 122.000 0.045 1.000 -0.016 101870 101871 SPy1694 SPy1695 nagA FALSE 0.245 118.000 0.090 1.000 N -0.584 101875 101876 SPy1700 SPy1701 TRUE 0.938 2.000 0.047 NA 0.805 101876 101877 SPy1701 SPy1704 lacD.1 FALSE 0.130 209.000 0.019 NA 0.814 101877 2137410 SPy1704 SPy_1705 lacD.1 lacC.1 TRUE 0.914 -17.000 0.000 NA NA 2137410 101878 SPy_1705 SPy1707 lacC.1 lacB.1 TRUE 0.853 10.000 0.000 NA NA 101878 101879 SPy1707 SPy1708 lacB.1 lacA.1 TRUE 0.998 15.000 0.500 0.002 Y NA 101879 101880 SPy1708 SPy1709 lacA.1 FALSE 0.134 240.000 0.000 1.000 Y NA 101880 101881 SPy1709 SPy1710 TRUE 0.961 29.000 0.000 0.017 Y -0.103 101881 101882 SPy1710 SPy1711 TRUE 0.998 -7.000 0.429 0.013 Y -0.544 101884 101885 SPy1714 SPy1715 copZ copA TRUE 0.990 14.000 0.048 0.002 Y -0.207 101885 101886 SPy1715 SPy1717 copA copY TRUE 0.753 30.000 0.064 1.000 N 0.963 101888 101889 SPy1719 SPy1721 rbfA infB TRUE 0.640 199.000 0.530 1.000 Y 0.776 101889 101890 SPy1721 SPy1722 infB TRUE 0.978 20.000 0.223 NA Y 0.834 101890 101891 SPy1722 SPy1723 TRUE 0.987 -7.000 0.408 NA N 0.624 101891 101892 SPy1723 SPy1724 nusA TRUE 0.987 16.000 0.323 NA Y 0.805 101892 101893 SPy1724 SPy1725 nusA TRUE 0.720 175.000 0.759 NA 0.074 101893 398248 SPy1725 SPy_t51 tRNA-Ser FALSE 0.057 261.000 0.000 NA NA 398248 101894 SPy_t51 SPy1726 tRNA-Ser TRUE 0.426 65.000 0.000 NA NA 101894 101895 SPy1726 SPy1727 TRUE 0.968 0.000 0.154 NA 0.013 101895 101896 SPy1727 SPy1728 TRUE 0.574 64.000 0.107 NA N 0.912 101896 101897 SPy1728 SPy1729 TRUE 0.948 3.000 0.167 NA N 0.599 101898 101899 SPy1730 SPy1731 hit TRUE 0.958 -3.000 0.063 NA -0.191 101900 101901 SPy1733 SPy1734 TRUE 0.960 9.000 0.283 NA N -0.281 101901 101902 SPy1734 SPy1735 TRUE 0.943 -25.000 0.033 NA -0.970 101902 101903 SPy1735 SPy1736 FALSE 0.202 154.000 0.008 NA 0.291 101904 101905 SPy1737 SPy1738 manL FALSE 0.023 352.000 0.000 1.000 -0.937 101905 101906 SPy1738 SPy1739 manL manM TRUE 0.981 89.000 0.943 0.017 Y -0.921 101906 101907 SPy1739 SPy1740 manM manN TRUE 0.998 17.000 0.812 0.017 Y -0.722 101907 101908 SPy1740 SPy1741 manN TRUE 0.788 114.000 0.583 NA 0.065 101908 101909 SPy1741 SPy1742 serS FALSE 0.038 392.000 0.003 NA 0.195 101910 101911 SPy1743 SPy1744 accA accD TRUE 0.997 -3.000 0.234 0.002 Y 0.477 101911 101912 SPy1744 SPy1745 accD accC TRUE 0.991 9.000 0.090 0.002 Y 0.030 101912 101913 SPy1745 SPy1746 accC fabZ TRUE 0.899 32.000 0.045 1.000 Y -0.703 101913 101914 SPy1746 SPy1747 fabZ accB TRUE 0.993 0.000 0.047 0.007 Y -0.942 101914 101915 SPy1747 SPy1748 accB fabF TRUE 0.970 2.000 0.074 1.000 Y 0.907 101915 101916 SPy1748 SPy1749 fabF fabG TRUE 0.957 15.000 0.056 1.000 Y 0.920 101916 101917 SPy1749 SPy1750 fabG fabD TRUE 0.998 -10.000 0.432 0.007 Y 0.965 101917 101918 SPy1750 SPy1751 fabD fabK TRUE 0.869 25.000 0.099 1.000 0.970 101918 101919 SPy1751 SPy1753 fabK acpP FALSE 0.239 202.000 0.216 1.000 -0.140 101919 101920 SPy1753 SPy1754 acpP fabH TRUE 0.859 61.000 0.065 0.007 0.009 101920 101921 SPy1754 SPy1755 fabH TRUE 0.905 1.000 0.070 1.000 N 0.055 101921 101922 SPy1755 SPy1758 phaB TRUE 0.388 77.000 0.098 1.000 N -0.746 101922 101923 SPy1758 SPy1759 phaB dnaJ FALSE 0.028 220.000 0.000 1.000 N -0.099 101923 101924 SPy1759 SPy1760 dnaJ dnaK TRUE 0.564 281.000 0.196 0.003 Y -0.828 101924 101925 SPy1760 SPy1761 dnaK grpE TRUE 0.631 181.000 0.026 0.007 Y 0.802 101925 101926 SPy1761 SPy1763 grpE hrcA TRUE 0.877 3.000 0.051 1.000 N 0.688 101926 101927 SPy1763 SPy1764 hrcA FALSE 0.131 135.000 0.009 1.000 N 0.223 101927 101928 SPy1764 SPy1765 TRUE 0.958 -3.000 0.174 1.000 N NA 101928 101929 SPy1765 SPy1766 TRUE 0.957 -10.000 0.174 1.000 N NA 101929 101930 SPy1766 SPy1768 FALSE 0.020 391.000 0.000 1.000 0.069 101930 101931 SPy1768 SPy1769 FALSE 0.076 219.000 0.000 NA NA 101931 101932 SPy1769 SPy1770 gatB TRUE 0.923 -3.000 0.000 NA NA 101932 101933 SPy1770 SPy1771 gatB gatA TRUE 0.998 0.000 0.492 0.002 Y 0.404 101933 101934 SPy1771 SPy1772 gatA gatC TRUE 0.999 0.000 0.643 0.002 Y 0.371 101934 101935 SPy1772 SPy1776 gatC FALSE 0.007 995.000 0.000 1.000 N -0.461 101935 101936 SPy1776 SPy1777 codY FALSE 0.188 147.000 0.083 1.000 N 0.573 101936 101937 SPy1777 SPy1779 codY FALSE 0.061 218.000 0.015 1.000 N 0.858 101941 101942 SPy1783 SPy1784 TRUE 0.858 13.000 0.000 NA 0.337 101942 101943 SPy1784 SPy1785 recG FALSE 0.017 293.000 0.000 1.000 N 0.218 101943 101944 SPy1785 SPy1787 recG FALSE 0.021 375.000 0.000 1.000 -0.375 101944 101945 SPy1787 SPy1788 TRUE 0.987 -3.000 0.429 1.000 NA 101945 101946 SPy1788 SPy1789 TRUE 0.993 -3.000 0.562 NA NA 101946 101947 SPy1789 SPy1790 TRUE 0.961 -3.000 0.081 NA -0.683 101947 101948 SPy1790 SPy1791 TRUE 0.997 -7.000 0.576 0.006 N -0.005 101948 101949 SPy1791 SPy1793 TRUE 0.918 -3.000 0.047 1.000 N NA 101949 101950 SPy1793 SPy1794 TRUE 0.996 -3.000 0.657 1.000 Y NA 101950 101951 SPy1794 SPy1795 TRUE 0.997 2.000 0.877 1.000 Y -0.949 101951 101952 SPy1795 SPy1796 TRUE 0.973 -16.000 0.182 NA -0.951 101952 101953 SPy1796 SPy1798 FALSE 0.332 197.000 0.273 NA -0.011 101953 101954 SPy1798 SPy1801 isp2 FALSE 0.024 489.000 0.000 NA -0.543 101954 101955 SPy1801 SPy1802 isp2 alr TRUE 0.406 87.000 0.022 NA -0.041 101955 101956 SPy1802 SPy1804 alr acpS TRUE 0.934 -3.000 0.093 1.000 N 0.193 101956 101957 SPy1804 SPy1805 acpS secA FALSE 0.160 116.000 0.008 1.000 N 0.131 101957 101958 SPy1805 SPy1806 secA TRUE 0.345 78.000 0.000 NA NA 101958 101959 SPy1806 SPy1807 TRUE 0.873 5.000 0.000 NA NA 101959 101960 SPy1807 SPy1810 pmi FALSE 0.058 162.000 0.000 1.000 N NA 101960 101961 SPy1810 SPy1811 pmi scrK TRUE 0.783 95.000 0.333 1.000 Y -0.477 101961 101962 SPy1811 SPy1813 scrK FALSE 0.036 264.000 0.000 1.000 -0.478 101962 101963 SPy1813 SPy1815 scrA FALSE 0.040 253.000 0.000 1.000 -0.197 101964 101965 SPy1816 SPy1817 scrB scrR TRUE 0.981 5.000 0.571 1.000 N -0.555 101966 101967 SPy1818 SPy1820 nusB TRUE 0.983 -7.000 0.265 NA 0.289 101967 101968 SPy1820 SPy1821 efp TRUE 0.711 46.000 0.031 NA -0.453 101968 101969 SPy1821 SPy1823 efp comEB FALSE 0.166 96.000 0.005 1.000 N -0.749 101969 101970 SPy1823 SPy1824 comEB pepP TRUE 0.633 35.000 0.018 1.000 N 0.060 101970 101971 SPy1824 SPy1825 pepP uvrA FALSE 0.162 115.000 0.008 1.000 N 0.217 101972 101973 SPy1827 SPy1828 FALSE 0.320 133.000 0.072 NA 0.093 101974 101975 SPy1829 SPy1830 rpsR FALSE 0.099 165.000 0.012 1.000 N -0.347 101975 101976 SPy1830 SPy1831 rpsF TRUE 0.758 22.000 0.012 1.000 N 0.907 101976 101977 SPy1831 SPy1832 rpsF FALSE 0.129 173.000 0.000 NA NA 101978 101979 SPy1833 SPy1834 mutY FALSE 0.225 76.000 0.002 1.000 N -0.815 101980 101981 SPy1835 SPy1836 trx TRUE 0.398 81.000 0.053 1.000 NA 101981 101982 SPy1836 SPy1837 mutS2 TRUE 0.899 1.000 0.005 1.000 NA 101982 101983 SPy1837 SPy1839 mutS2 FALSE 0.230 149.000 0.070 1.000 0.194 101983 101984 SPy1839 SPy1840 TRUE 0.926 3.000 0.019 NA 0.371 101985 101986 SPy1841 SPy1842 spi TRUE 0.866 11.000 0.080 1.000 N 0.587 101986 101987 SPy1842 SPy1844 spi TRUE 0.534 58.000 0.099 1.000 N -0.304 101987 101988 SPy1844 SPy1845 TRUE 0.405 91.000 0.050 NA -0.133 101991 101992 SPy1850 SPy1851 TRUE 0.984 -15.000 0.326 NA -0.617 101994 101995 SPy1854 SPy1856 glpF.2 norA FALSE 0.179 403.000 0.000 0.031 Y -0.323 101996 101997 SPy1857 SPy1858 pepXP TRUE 0.874 22.000 0.081 1.000 0.084 101997 101998 SPy1858 SPy1861 pepXP FALSE 0.017 472.000 0.000 1.000 -0.476 101998 101999 SPy1861 SPy1862 FALSE 0.124 193.000 0.002 NA 0.847 102000 102001 SPy1863 SPy1864 dnaQ FALSE 0.253 149.000 0.156 1.000 N 0.462 102001 102002 SPy1864 SPy1865 dnaQ TRUE 0.915 10.000 0.057 NA -0.014 102004 102005 SPy1867 SPy1868 deoC nupC TRUE 0.968 30.000 0.333 1.000 Y -0.573 102005 102006 SPy1868 SPy1869 nupC udp TRUE 0.932 21.000 0.015 1.000 Y -0.564 102007 102008 SPy1870 SPy1871 rpsN2 FALSE 0.027 236.000 0.000 1.000 N 0.530 102009 102010 SPy1872 SPy1873 TRUE 0.936 -10.000 0.030 1.000 0.258 102010 102011 SPy1873 SPy1874 TRUE 0.963 2.000 0.209 1.000 0.493 102012 102013 SPy1875 SPy1876 TRUE 0.990 2.000 0.576 NA NA 102014 102015 SPy1877 SPy1878 glnA TRUE 0.785 38.000 0.179 1.000 N -0.697 102015 102016 SPy1878 SPy1879 TRUE 0.666 67.000 0.154 NA 0.101 102016 102017 SPy1879 SPy1881 pgk FALSE 0.068 263.000 0.002 NA -0.345 102017 102018 SPy1881 SPy1882 pgk lppC FALSE 0.089 193.000 0.003 1.000 -0.423 102018 102019 SPy1882 SPy1884 lppC FALSE 0.047 230.000 0.000 1.000 -0.618 102019 102020 SPy1884 SPy1885 FALSE 0.066 237.000 0.006 1.000 -0.265 102020 102021 SPy1885 SPy1886 asp TRUE 0.992 0.000 0.567 NA 0.089 102021 102022 SPy1886 SPy1888 asp rpmB FALSE 0.243 152.000 0.044 NA -0.590 102022 102023 SPy1888 SPy1889 rpmB fba FALSE 0.011 382.000 0.000 1.000 N 0.069 102023 398247 SPy1889 SPy_t52 fba tRNA-Leu FALSE 0.087 207.000 0.000 NA NA 398247 102024 SPy_t52 SPy1892 tRNA-Leu TRUE 0.519 54.000 0.000 NA NA 102024 102025 SPy1892 SPy1894 pyrG FALSE 0.121 168.000 0.002 1.000 0.786 102025 102026 SPy1894 SPy1895 pyrG rpoE FALSE 0.049 257.000 0.029 1.000 N 0.063 102026 102027 SPy1895 SPy1896 rpoE ropA FALSE 0.048 217.000 0.005 1.000 N -0.583 102029 102030 SPy1898 SPy1899 TRUE 0.941 17.000 0.149 NA -0.140 102030 102031 SPy1899 SPy1900 thiD TRUE 0.983 -10.000 0.276 NA -0.250 102031 102032 SPy1900 SPy1901 thiD truA TRUE 0.918 -10.000 0.058 1.000 N -0.135 102032 102033 SPy1901 SPy1902 truA comX1.2 FALSE 0.076 185.000 0.000 1.000 0.498 102033 398246 SPy1902 SPy_t53 comX1.2 tRNA-Arg TRUE 0.784 26.000 0.000 NA NA 398246 398245 SPy_t53 SPy_t54 tRNA-Arg tRNA-Asn FALSE 0.333 80.000 0.000 NA NA 398245 3811781 SPy_t54 SPy_r18 tRNA-Asn TRUE 0.868 6.000 0.000 NA NA 3811781 407269 SPy_r18 SPy_r11 rrl FALSE 0.296 87.000 0.000 NA NA 407269 398244 SPy_r11 SPy_t55 rrl tRNA-Ala FALSE 0.045 296.000 0.000 NA NA 398244 3811782 SPy_t55 SPy_r12 tRNA-Ala TRUE 0.555 50.000 0.000 NA NA 3811782 102034 SPy_r12 SPy1903 FALSE 0.031 387.000 0.000 NA NA 102035 102036 SPy1904 SPy1905 hsdR hsdS TRUE 0.986 13.000 0.000 0.001 Y -0.748 102036 102037 SPy1905 SPy1906 hsdS hsdM TRUE 0.973 13.000 0.000 0.049 Y -0.730 102038 2137412 SPy1908 SPy_1910 salR salK TRUE 0.913 -19.000 0.000 NA NA 2137412 102039 SPy_1910 SPy1911 salK salY TRUE 0.641 40.000 0.000 NA NA 102039 102040 SPy1911 SPy1912 salY salX TRUE 0.842 2.000 0.000 1.000 -0.610 102040 2137413 SPy1912 SPy_1913 salX TRUE 0.923 -3.000 0.000 NA NA 2137413 102041 SPy_1913 SPy1914 salB TRUE 0.361 74.000 0.000 NA NA 102041 102042 SPy1914 SPy1915 salB salA FALSE 0.308 83.000 0.000 NA 0.198 102042 102043 SPy1915 SPy1916 salA lacG FALSE 0.016 503.000 0.000 1.000 -0.211 102043 102044 SPy1916 SPy1917 lacG lacE TRUE 0.461 88.000 0.000 1.000 Y -0.102 102044 102045 SPy1917 SPy1918 lacE lacF TRUE 0.994 0.000 0.150 0.012 Y -0.036 102045 102046 SPy1918 SPy1919 lacF lacD.2 TRUE 0.990 24.000 0.667 1.000 Y -0.709 102046 102047 SPy1919 SPy1921 lacD.2 lacC.2 TRUE 0.987 4.000 0.000 0.002 Y 0.205 102047 102048 SPy1921 SPy1922 lacC.2 lacB.2 TRUE 0.745 48.000 0.000 1.000 Y 0.401 102048 102049 SPy1922 SPy1923 lacB.2 lacA.2 TRUE 0.959 35.000 0.000 0.002 Y -0.532 102050 102051 SPy1924 SPy1926 lacR.2 FALSE 0.020 656.000 0.000 NA -0.150 102051 102052 SPy1926 SPy1927 TRUE 0.919 -10.000 0.000 NA -0.300 102052 2137414 SPy1927 SPy_1930 TRUE 0.407 67.000 0.000 NA NA 102053 102054 SPy1931 SPy1932 rpsI rplM TRUE 0.996 21.000 0.601 0.023 Y -0.448 102054 102055 SPy1932 SPy1934 rplM FALSE 0.029 218.000 0.000 1.000 N 0.084 102055 102056 SPy1934 SPy1935 TRUE 0.957 -3.000 0.051 NA 0.929 102056 102057 SPy1935 SPy1936 FALSE 0.245 103.000 0.000 NA 0.967 102057 102058 SPy1936 SPy1937 TRUE 0.373 97.000 0.036 NA 0.738 102058 102059 SPy1937 SPy1938 TRUE 0.943 4.000 0.109 NA -0.521 102059 102060 SPy1938 SPy1939 TRUE 0.641 47.000 0.003 NA -0.126 102060 102061 SPy1939 SPy1940 FALSE 0.091 196.000 0.000 NA -0.625 102061 102062 SPy1940 SPy1941 cysS TRUE 0.959 -7.000 0.129 1.000 -0.434 102062 102063 SPy1941 SPy1942 cysS TRUE 0.806 28.000 0.002 NA NA 102063 102064 SPy1942 SPy1944 cysE FALSE 0.026 479.000 0.000 NA NA 102064 102065 SPy1944 SPy1945 cysE TRUE 0.931 9.000 0.097 NA -0.731 102065 102066 SPy1945 SPy1946 pnpA TRUE 0.945 -7.000 0.009 NA -0.780 102066 102067 SPy1946 SPy1947 pnpA FALSE 0.019 281.000 0.000 1.000 N 0.412 102067 102068 SPy1947 SPy1949 FALSE 0.198 153.000 0.056 1.000 -0.305 102068 102069 SPy1949 SPy1950 TRUE 0.976 27.000 0.241 0.020 -0.702 102069 102070 SPy1950 SPy1952 TRUE 0.983 -7.000 0.048 0.012 N NA 102070 102071 SPy1952 SPy1955 rpsO FALSE 0.014 352.000 0.000 1.000 N NA 102071 102072 SPy1955 SPy1956 rpsO FALSE 0.146 158.000 0.000 NA NA 102073 102074 SPy1957 SPy1958 def FALSE 0.239 101.000 0.000 NA -0.876 102075 102076 SPy1959 SPy1960 TRUE 0.601 131.000 0.414 1.000 0.426 102076 102077 SPy1960 SPy1961 polC FALSE 0.202 110.000 0.020 1.000 N 0.769 102077 102078 SPy1961 SPy1962 polC proS FALSE 0.189 255.000 0.070 0.045 N 0.593 102078 102079 SPy1962 SPy1963 proS FALSE 0.110 198.000 0.095 1.000 N 0.618 102079 102080 SPy1963 SPy1964 cdsA FALSE 0.335 73.000 0.040 1.000 N -0.037 102080 102081 SPy1964 SPy1965 cdsA uppS TRUE 0.964 13.000 0.113 1.000 Y 0.047 102081 102082 SPy1965 SPy1968 uppS FALSE 0.074 219.000 0.007 NA N 0.369 102082 102083 SPy1968 SPy1971 FALSE 0.213 116.000 0.006 NA N 0.277 102083 102084 SPy1971 SPy1972 pulA FALSE 0.159 115.000 0.000 NA N 0.622 102084 102085 SPy1972 SPy1973 pulA dexB TRUE 0.582 198.000 0.049 0.008 Y 0.829 102085 102086 SPy1973 SPy1976 dexB msmK TRUE 0.583 129.000 0.171 1.000 Y 0.471 102086 102087 SPy1976 SPy1978 msmK lrp FALSE 0.047 298.000 0.071 1.000 N 0.586 102089 102090 SPy1980 SPy1981 relA TRUE 0.922 15.000 0.177 1.000 N -0.302 102090 102091 SPy1981 SPy1983 relA scl FALSE 0.045 240.000 0.000 1.000 0.152 102093 102094 SPy1985 SPy1986 TRUE 0.830 83.000 0.610 1.000 0.364 102094 102095 SPy1986 SPy1987 FALSE 0.033 358.000 0.000 NA -0.682 102095 102096 SPy1987 SPy1988 TRUE 0.977 0.000 0.227 NA -0.524 102096 102097 SPy1988 SPy1989 TRUE 0.481 71.000 0.013 NA -0.234 102098 102099 SPy1990 SPy1991 pabB trpG TRUE 0.878 33.000 0.009 1.000 Y 0.946 102099 102100 SPy1991 SPy1992 trpG TRUE 0.689 33.000 0.035 1.000 N 0.806 102100 398239 SPy1992 SPy_t56 tRNA-Lys FALSE 0.048 286.000 0.000 NA NA 398239 102101 SPy_t56 SPy1994 tRNA-Lys FALSE 0.180 139.000 0.000 NA NA 102101 102102 SPy1994 SPy1995 flaR TRUE 0.604 55.000 0.062 1.000 0.869 102102 102103 SPy1995 SPy1998 flaR smeZ FALSE 0.042 249.000 0.000 1.000 0.559 102105 102106 SPy2000 SPy2001 dppA dppB TRUE 0.688 113.000 0.000 0.030 Y -0.121 102106 102107 SPy2001 SPy2002 dppB dppC TRUE 0.999 -3.000 1.000 0.030 Y 0.677 102107 102108 SPy2002 SPy2003 dppC dppD TRUE 0.984 12.000 0.333 1.000 Y 0.527 102108 102109 SPy2003 SPy2004 dppD dppE TRUE 0.999 -16.000 0.750 0.021 Y 0.181 102110 102111 SPy2005 SPy2006 FALSE 0.128 169.000 0.000 NA -0.252 102111 102112 SPy2006 SPy2007 lmb TRUE 0.854 13.000 0.000 NA -0.643 102112 102113 SPy2007 SPy2009 lmb FALSE 0.047 236.000 0.000 1.000 0.506 102113 102114 SPy2009 SPy2010 scpA TRUE 0.462 97.000 0.000 0.063 -0.569 102116 102117 SPy2016 SPy2018 sic emm1 FALSE 0.103 189.000 0.000 NA 0.940 102117 102118 SPy2018 SPy2019 emm1 mga FALSE 0.110 185.000 0.000 NA 0.928 102118 102119 SPy2019 SPy2023 mga FALSE 0.021 676.000 0.000 NA 0.938 102119 102120 SPy2023 SPy2025 isp TRUE 0.937 79.000 1.000 NA NA 102120 102121 SPy2025 SPy2026 isp TRUE 0.494 102.000 0.200 1.000 NA 102121 102122 SPy2026 SPy2027 TRUE 0.995 -3.000 0.500 1.000 Y -0.820 102122 102123 SPy2027 SPy2029 TRUE 0.514 94.000 0.267 1.000 N -0.277 102123 102124 SPy2029 SPy2031 TRUE 0.989 13.000 0.467 1.000 Y -0.205 102124 102125 SPy2031 SPy2032 TRUE 0.984 -13.000 0.385 NA N -0.706 102125 102126 SPy2032 SPy2033 FALSE 0.149 423.000 0.333 NA NA 102126 102127 SPy2033 SPy2034 TRUE 0.775 27.000 0.000 NA NA 102127 102128 SPy2034 SPy2037 FALSE 0.019 756.000 0.000 NA 0.015 102128 2137415 SPy2037 SPy_2038 FALSE 0.025 480.000 0.000 NA NA 2137415 102129 SPy_2038 SPy2039 speB TRUE 0.893 2.000 0.000 NA NA 102129 102130 SPy2039 SPy2040 speB FALSE 0.054 272.000 0.000 NA NA 102131 102132 SPy2041 SPy2042 ropB FALSE 0.049 284.000 0.000 NA NA 102135 102136 SPy2047 SPy2048 gldA mipB TRUE 0.699 57.000 0.211 1.000 N -0.437 102136 102137 SPy2048 SPy2049 mipB pflD TRUE 0.963 13.000 0.368 1.000 N -0.124 102137 102138 SPy2049 SPy2050 pflD FALSE 0.114 210.000 0.132 1.000 N 0.297 102138 102139 SPy2050 SPy2051 TRUE 0.999 10.000 0.889 0.012 Y -0.041 102139 102140 SPy2051 SPy2052 TRUE 0.998 28.000 0.889 0.012 Y -0.614 102140 102141 SPy2052 SPy2053 FALSE 0.054 288.000 0.091 1.000 N -0.457 102141 102142 SPy2053 SPy2054 TRUE 0.974 16.000 0.188 1.000 Y 0.001 102144 102145 SPy2058 SPy2059 pbp2A FALSE 0.032 215.000 0.000 1.000 N NA 102145 102146 SPy2059 SPy2060 pbp2A TRUE 0.717 39.000 0.062 NA N -0.822 102150 102151 SPy2070 SPy2072 groEL groES TRUE 0.977 36.000 0.160 0.007 Y 0.608 102151 102152 SPy2072 SPy2073 groES clpC FALSE 0.307 178.000 0.036 1.000 Y 0.075 102152 102153 SPy2073 SPy2074 clpC ctsR TRUE 0.965 0.000 0.188 NA N -0.127 102153 102154 SPy2074 SPy2077 ctsR csp FALSE 0.288 196.000 0.013 NA Y 0.680 102154 398243 SPy2077 SPy_t57 csp tRNA-Cys FALSE 0.024 520.000 0.000 NA NA 102155 102156 SPy2079 SPy2080 ahpC nox1 TRUE 0.988 21.000 0.551 1.000 Y 0.989 102158 102159 SPy2082 SPy2083 hutU TRUE 0.617 89.000 0.086 1.000 Y 0.971 102159 102160 SPy2083 SPy2084 TRUE 0.966 11.000 0.143 1.000 Y 0.957 102160 102161 SPy2084 SPy2085 fhs.2 TRUE 0.832 18.000 0.038 1.000 N 0.974 102161 102162 SPy2085 SPy2087 fhs.2 TRUE 0.885 22.000 0.038 NA 0.953 102162 102163 SPy2087 SPy2088 FALSE 0.136 220.000 0.062 NA 0.754 102163 102164 SPy2088 SPy2089 hutH TRUE 0.940 11.000 0.006 1.000 Y 0.898 102164 102165 SPy2089 SPy2090 hutH hutG TRUE 0.565 186.000 0.000 0.002 Y 0.961 102167 102168 SPy2092 SPy2093 rpsB tsf TRUE 0.866 134.000 0.748 1.000 Y 0.449 102169 102170 SPy2095 SPy2096 pepO dexS FALSE 0.033 208.000 0.000 1.000 N 0.530 102170 102171 SPy2096 SPy2097 dexS TRUE 0.939 67.000 0.650 1.000 Y 0.199 102173 102174 SPy2103 SPy2104 TRUE 0.694 42.000 0.007 NA 0.067 102175 102176 SPy2105 SPy2106 nrdG TRUE 0.959 0.000 0.159 1.000 -0.436 102176 102177 SPy2106 SPy2107 TRUE 0.890 9.000 0.041 1.000 0.770 102177 102178 SPy2107 SPy2110 nrdD FALSE 0.024 357.000 0.000 1.000 0.665 102178 102179 SPy2110 SPy2111 nrdD TRUE 0.388 97.000 0.057 NA 0.085 102179 102180 SPy2111 SPy2112 FALSE 0.028 413.000 0.000 NA 0.057 102180 102181 SPy2112 SPy2113 TRUE 0.988 12.000 0.651 NA 0.382 102181 102182 SPy2113 SPy2114 TRUE 0.992 -3.000 0.537 NA -0.502 102182 102183 SPy2114 SPy2115 FALSE 0.334 113.000 0.032 NA -0.763 102183 102184 SPy2115 SPy2116 recA FALSE 0.027 291.000 0.004 1.000 N -0.308 102184 102185 SPy2116 SPy2117 recA cinA TRUE 0.390 89.000 0.083 1.000 0.352 102185 102186 SPy2117 SPy2118 cinA tag TRUE 0.399 69.000 0.011 1.000 -0.872 102186 102187 SPy2118 SPy2119 tag ruvA TRUE 0.943 10.000 0.012 1.000 Y -0.937 102187 102188 SPy2119 SPy2120 ruvA lmrP TRUE 0.886 2.000 0.005 1.000 -0.613 102188 102189 SPy2120 SPy2121 lmrP mutL TRUE 0.844 11.000 0.006 1.000 -0.632 102189 102190 SPy2121 SPy2122 mutL int4 TRUE 0.423 95.000 0.000 1.000 Y -0.666 102190 102191 SPy2122 SPy2125 int4 FALSE 0.007 1259.000 0.000 1.000 N NA 102192 102193 SPy2126 SPy2127 TRUE 0.904 34.000 0.091 1.000 Y -0.556 102193 102194 SPy2127 SPy2128 TRUE 0.940 10.000 0.000 NA Y -0.854 102194 102195 SPy2128 SPy2129 TRUE 0.987 0.000 0.400 NA -0.917 102195 102196 SPy2129 SPy2130 FALSE 0.057 256.000 0.000 NA 0.513 102196 102197 SPy2130 SPy2131 TRUE 0.915 -13.000 0.000 NA -0.503 102197 102198 SPy2131 SPy2132 TRUE 0.885 3.000 0.000 NA NA 102198 102199 SPy2132 SPy2133 TRUE 0.855 12.000 0.000 NA NA 102199 102200 SPy2133 SPy2134 TRUE 0.885 3.000 0.000 NA NA 102200 102201 SPy2134 SPy2135 TRUE 0.993 1.000 0.714 NA NA 102201 102202 SPy2135 SPy2136 TRUE 0.980 -31.000 0.286 NA 0.104 102202 102203 SPy2136 SPy2140 FALSE 0.020 740.000 0.000 NA -0.037 102203 102204 SPy2140 SPy2142 TRUE 0.358 74.000 0.000 NA 0.586 102204 102205 SPy2142 SPy2144 FALSE 0.029 404.000 0.000 NA 0.245 102205 102206 SPy2144 SPy2145 TRUE 0.907 -25.000 0.000 NA 0.520 102206 102207 SPy2145 SPy2147 FALSE 0.121 174.000 0.000 NA -0.797 102208 102209 SPy2148 SPy2149 mutS TRUE 0.951 -13.000 0.031 NA 0.438 102209 102210 SPy2149 SPy2150 ahrC FALSE 0.271 143.000 0.054 NA -0.857 102211 102212 SPy2151 SPy2152 argS TRUE 0.408 88.000 0.032 NA 0.040 102213 102214 SPy2153 SPy2154 TRUE 0.959 43.000 0.667 NA 0.857 102214 102215 SPy2154 SPy2155 TRUE 0.936 20.000 0.156 NA 0.571 102215 102216 SPy2155 SPy2156 aspS TRUE 0.951 -7.000 0.016 NA 0.004 102216 102217 SPy2156 SPy2157 aspS hisS TRUE 0.355 338.000 0.161 0.044 Y -0.057 102218 102219 SPy2159 SPy2160 rpmF rpmG TRUE 0.965 16.000 0.012 0.030 0.892 102219 102220 SPy2160 SPy2162 rpmG cadD FALSE 0.029 293.000 0.000 NA N 0.038 102220 102221 SPy2162 SPy2163 cadD cadC TRUE 0.991 12.000 0.875 NA N -0.354 102221 102222 SPy2163 SPy2164 cadC TRUE 0.965 30.000 0.571 1.000 -0.367 102222 102223 SPy2164 SPy2165 TRUE 0.809 66.000 0.400 1.000 0.342 102223 102224 SPy2165 SPy2166 TRUE 0.997 -3.000 1.000 NA -0.127 102224 102225 SPy2166 SPy2169 FALSE 0.018 1211.000 0.000 NA 0.731 102227 102228 SPy2172 SPy2173 TRUE 0.984 -13.000 0.300 NA NA 102228 102229 SPy2173 SPy2174 TRUE 0.987 -3.000 0.350 NA NA 102232 102233 SPy2178 SPy2180 rpsD FALSE 0.018 291.000 0.000 1.000 N NA 102233 102234 SPy2180 SPy2181 FALSE 0.022 632.000 0.000 NA NA 102234 102235 SPy2181 SPy2182 holB TRUE 0.909 17.000 0.030 NA 0.904 102235 102236 SPy2182 SPy2183 holB rplI TRUE 0.786 30.000 0.100 1.000 N 0.963 102236 102237 SPy2183 SPy2184 rplI TRUE 0.942 -3.000 0.119 1.000 N 0.921 102237 102238 SPy2184 SPy2185 gidA FALSE 0.213 91.000 0.011 1.000 N 0.838 102238 102239 SPy2185 SPy2186 gidA FALSE 0.203 124.000 0.005 1.000 0.872 102239 102240 SPy2186 SPy2188 FALSE 0.018 777.000 0.003 1.000 0.900 102241 102242 SPy2189 SPy2190 sdhB sdhA TRUE 0.995 12.000 0.221 0.001 Y 0.790 102243 102244 SPy2191 SPy2193 FALSE 0.022 372.000 0.000 1.000 0.581 102244 102245 SPy2193 SPy2194 TRUE 0.983 -7.000 0.136 1.000 Y 0.335 102245 102246 SPy2194 SPy2195 TRUE 0.999 -24.000 0.713 0.020 Y NA 102246 102247 SPy2195 SPy2196 pgsA TRUE 0.879 -49.000 0.015 1.000 N NA 102247 102248 SPy2196 SPy2197 pgsA TRUE 0.908 14.000 0.077 1.000 0.629 102248 102249 SPy2197 SPy2198 TRUE 0.739 50.000 0.156 1.000 0.028 102249 102250 SPy2198 SPy2199 TRUE 0.998 2.000 0.872 0.004 0.220 102251 102252 SPy2200 SPy2201 hasA hasB TRUE 0.874 36.000 0.048 1.000 Y -0.758 102252 102253 SPy2201 SPy2202 hasB hasC FALSE 0.217 182.000 0.000 1.000 Y NA 102253 102254 SPy2202 SPy2203 hasC FALSE 0.029 308.000 0.000 1.000 NA 102254 102255 SPy2203 SPy2204 recF TRUE 0.963 2.000 0.209 1.000 0.318 102256 102257 SPy2205 SPy2206 guaB FALSE 0.026 232.000 0.000 1.000 N -0.560 102257 102258 SPy2206 SPy2207 guaB trsA FALSE 0.022 308.000 0.002 1.000 N -0.759 102259 102260 SPy2209 SPy2210 TRUE 0.462 79.000 0.027 NA 0.130 102260 102261 SPy2210 SPy2211 TRUE 0.441 83.000 0.040 NA -0.023 398242 398241 SPy_t58 SPy_t59 tRNA-Asn tRNA-Glu TRUE 0.704 34.000 0.000 NA NA 398241 2137417 SPy_t59 SPy_2214 tRNA-Glu FALSE 0.091 200.000 0.000 NA NA 102263 102264 SPy2216 SPy2217 htrA spoJ TRUE 0.400 59.000 0.015 1.000 N -0.193 102264 100568 SPy2217 SPy0002 spoJ dnaA FALSE 0.039 233.000 0.002 1.000 N -0.188